Query psy2113
Match_columns 183
No_of_seqs 264 out of 1405
Neff 11.4
Searched_HMMs 29240
Date Sat Aug 17 00:36:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2113.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2113hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.8E-28 6E-33 173.5 21.1 157 6-176 12-175 (304)
2 3ow8_A WD repeat-containing pr 100.0 5.6E-28 1.9E-32 172.2 20.9 149 9-172 166-320 (321)
3 4gqb_B Methylosome protein 50; 100.0 5.3E-28 1.8E-32 173.9 19.8 153 9-175 129-291 (344)
4 4gqb_B Methylosome protein 50; 100.0 2E-27 6.9E-32 170.9 22.1 165 9-177 32-205 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 7.7E-27 2.6E-31 167.5 21.6 156 9-175 99-259 (340)
6 1vyh_C Platelet-activating fac 100.0 5.2E-27 1.8E-31 172.3 20.7 153 8-175 109-267 (410)
7 3ow8_A WD repeat-containing pr 100.0 3.6E-27 1.2E-31 168.1 18.8 152 10-176 125-282 (321)
8 2hes_X YDR267CP; beta-propelle 100.0 1.1E-26 3.9E-31 166.0 20.5 164 8-174 59-231 (330)
9 4ery_A WD repeat-containing pr 100.0 3.8E-26 1.3E-30 161.7 22.6 154 8-176 24-183 (312)
10 4g56_B MGC81050 protein; prote 100.0 9E-27 3.1E-31 168.2 19.2 166 9-178 44-218 (357)
11 2pm7_B Protein transport prote 100.0 4.2E-26 1.4E-30 160.8 22.1 162 5-175 7-191 (297)
12 2ynn_A Coatomer subunit beta'; 100.0 4.4E-26 1.5E-30 161.2 21.9 156 9-176 57-220 (304)
13 4h5i_A Guanine nucleotide-exch 100.0 2.9E-26 9.8E-31 166.1 20.3 156 10-175 136-345 (365)
14 3fm0_A Protein CIAO1; WDR39,SG 99.9 5.6E-26 1.9E-30 163.3 20.0 158 8-174 62-226 (345)
15 4g56_B MGC81050 protein; prote 99.9 2.8E-26 9.7E-31 165.6 18.4 157 8-176 140-304 (357)
16 1vyh_C Platelet-activating fac 99.9 9.9E-26 3.4E-30 165.5 21.4 153 8-175 151-329 (410)
17 2pbi_B Guanine nucleotide-bind 99.9 1.3E-25 4.5E-30 161.9 21.3 158 10-175 109-273 (354)
18 1got_B GT-beta; complex (GTP-b 99.9 7.8E-26 2.7E-30 162.3 19.9 148 8-170 185-340 (340)
19 3frx_A Guanine nucleotide-bind 99.9 1.8E-25 6E-30 159.1 20.9 153 9-176 67-230 (319)
20 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.7E-25 5.9E-30 160.8 19.9 155 9-175 18-183 (345)
21 4ery_A WD repeat-containing pr 99.9 9.1E-25 3.1E-29 154.7 21.6 154 8-175 66-225 (312)
22 2hes_X YDR267CP; beta-propelle 99.9 1E-24 3.4E-29 155.9 21.4 160 7-174 14-185 (330)
23 1erj_A Transcriptional repress 99.9 1.1E-24 3.9E-29 159.0 21.9 152 9-175 125-289 (393)
24 3iz6_a 40S ribosomal protein R 99.9 3.8E-26 1.3E-30 166.2 14.0 160 10-175 111-282 (380)
25 1nr0_A Actin interacting prote 99.9 3.7E-25 1.3E-29 169.8 20.1 151 8-175 104-272 (611)
26 3frx_A Guanine nucleotide-bind 99.9 8.6E-25 2.9E-29 155.6 19.9 158 7-175 17-187 (319)
27 1nr0_A Actin interacting prote 99.9 1.6E-24 5.3E-29 166.4 21.9 154 8-175 148-357 (611)
28 2pbi_B Guanine nucleotide-bind 99.9 3.4E-24 1.2E-28 154.6 22.3 161 7-176 64-232 (354)
29 3iz6_a 40S ribosomal protein R 99.9 8.5E-25 2.9E-29 159.1 19.1 155 8-176 206-378 (380)
30 2pm7_B Protein transport prote 99.9 3.2E-24 1.1E-28 151.2 21.4 160 7-175 53-240 (297)
31 2xzm_R RACK1; ribosome, transl 99.9 5.1E-24 1.7E-28 152.9 21.9 153 9-175 78-246 (343)
32 2ymu_A WD-40 repeat protein; u 99.9 1.7E-24 5.8E-29 164.5 20.4 145 8-170 427-577 (577)
33 1erj_A Transcriptional repress 99.9 6.4E-24 2.2E-28 155.1 21.4 158 9-175 208-391 (393)
34 2xzm_R RACK1; ribosome, transl 99.9 6E-24 2.1E-28 152.6 20.6 155 9-172 23-202 (343)
35 3f3f_A Nucleoporin SEH1; struc 99.9 1.6E-23 5.3E-28 149.2 22.5 166 7-176 11-252 (351)
36 3bg1_A Protein SEC13 homolog; 99.9 3.6E-25 1.2E-29 157.3 13.9 161 5-174 11-199 (316)
37 4aow_A Guanine nucleotide-bind 99.9 6.9E-24 2.4E-28 151.2 20.6 168 6-176 37-340 (340)
38 4e54_B DNA damage-binding prot 99.9 1.2E-24 4.1E-29 160.8 16.1 158 8-177 120-286 (435)
39 2aq5_A Coronin-1A; WD40 repeat 99.9 8.2E-24 2.8E-28 154.7 20.0 163 6-176 80-257 (402)
40 3dwl_C Actin-related protein 2 99.9 8E-25 2.7E-29 158.5 14.5 156 9-175 13-179 (377)
41 3f3f_A Nucleoporin SEH1; struc 99.9 1.4E-23 4.8E-28 149.5 20.6 169 7-176 57-340 (351)
42 3jrp_A Fusion protein of prote 99.9 1.4E-23 4.9E-28 151.4 20.5 161 6-176 10-194 (379)
43 3dm0_A Maltose-binding peripla 99.9 1.2E-23 4.1E-28 163.5 20.6 157 9-176 432-595 (694)
44 3vl1_A 26S proteasome regulato 99.9 5.4E-24 1.9E-28 156.0 17.2 157 6-176 138-325 (420)
45 4ggc_A P55CDC, cell division c 99.9 5.2E-23 1.8E-27 145.4 21.3 156 11-175 29-317 (318)
46 1sq9_A Antiviral protein SKI8; 99.9 1.7E-23 5.8E-28 152.3 19.0 153 7-175 186-397 (397)
47 3odt_A Protein DOA1; ubiquitin 99.9 7.1E-23 2.4E-27 144.3 21.1 154 8-179 143-302 (313)
48 3mkq_A Coatomer beta'-subunit; 99.9 2.5E-23 8.7E-28 163.7 20.4 157 7-177 13-176 (814)
49 2ymu_A WD-40 repeat protein; u 99.9 5.5E-23 1.9E-27 156.3 21.2 147 8-172 386-538 (577)
50 3vl1_A 26S proteasome regulato 99.9 1.6E-23 5.6E-28 153.5 17.4 153 10-177 100-282 (420)
51 3dwl_C Actin-related protein 2 99.9 7.4E-24 2.5E-28 153.4 14.8 161 7-176 55-239 (377)
52 2aq5_A Coronin-1A; WD40 repeat 99.9 1.5E-23 5E-28 153.4 16.5 160 13-176 40-210 (402)
53 3k26_A Polycomb protein EED; W 99.9 2.4E-23 8.3E-28 149.6 17.0 153 9-176 71-263 (366)
54 2xyi_A Probable histone-bindin 99.9 6.2E-23 2.1E-27 151.5 19.5 165 8-175 182-355 (430)
55 1gxr_A ESG1, transducin-like e 99.9 1.2E-22 4E-27 144.5 20.3 160 7-176 51-217 (337)
56 2j04_B YDR362CP, TAU91; beta p 99.9 2E-23 6.7E-28 157.4 16.8 161 9-176 209-389 (524)
57 3k26_A Polycomb protein EED; W 99.9 1.8E-22 6.3E-27 145.0 21.0 155 7-175 18-194 (366)
58 3ei3_B DNA damage-binding prot 99.9 3E-22 1E-26 145.4 22.0 153 7-176 73-239 (383)
59 3sfz_A APAF-1, apoptotic pepti 99.9 1.2E-22 4.2E-27 166.2 22.1 155 7-175 615-776 (1249)
60 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.2E-22 3.9E-27 150.8 19.6 160 9-176 104-274 (450)
61 1r5m_A SIR4-interacting protei 99.9 1.3E-22 4.3E-27 148.4 18.7 151 8-172 248-424 (425)
62 4aez_A CDC20, WD repeat-contai 99.9 4.6E-22 1.6E-26 145.5 21.6 155 7-176 134-296 (401)
63 3dm0_A Maltose-binding peripla 99.9 1.8E-22 6.1E-27 156.9 20.4 159 8-176 383-553 (694)
64 3zwl_B Eukaryotic translation 99.9 4.7E-22 1.6E-26 142.9 21.2 162 7-176 32-252 (369)
65 1k8k_C P40, ARP2/3 complex 41 99.9 2.1E-22 7.3E-27 145.1 19.1 153 9-173 10-173 (372)
66 3bg1_A Protein SEC13 homolog; 99.9 3.4E-23 1.2E-27 147.2 14.6 124 47-174 8-137 (316)
67 4e54_B DNA damage-binding prot 99.9 2.2E-23 7.4E-28 154.1 13.7 155 7-176 164-330 (435)
68 1gxr_A ESG1, transducin-like e 99.9 1.1E-21 3.9E-26 139.4 22.1 152 9-177 143-300 (337)
69 3ei3_B DNA damage-binding prot 99.9 2.4E-22 8.2E-27 145.9 18.9 156 6-177 117-286 (383)
70 2j04_B YDR362CP, TAU91; beta p 99.9 1.6E-23 5.4E-28 157.9 13.1 152 8-174 267-429 (524)
71 3dw8_B Serine/threonine-protei 99.9 8.2E-23 2.8E-27 150.8 16.5 167 8-176 29-261 (447)
72 2xyi_A Probable histone-bindin 99.9 3.3E-22 1.1E-26 147.6 19.4 168 9-176 130-312 (430)
73 3jrp_A Fusion protein of prote 99.9 1.2E-21 4.1E-26 141.4 21.9 160 7-175 55-242 (379)
74 4gga_A P55CDC, cell division c 99.9 7.2E-22 2.5E-26 145.3 20.9 158 9-178 232-400 (420)
75 2j04_A TAU60, YPL007P, hypothe 99.9 2.9E-22 9.8E-27 150.1 18.8 155 7-176 85-257 (588)
76 3lrv_A PRE-mRNA-splicing facto 99.9 2.6E-22 8.7E-27 144.0 17.7 129 41-177 113-248 (343)
77 3jro_A Fusion protein of prote 99.9 2.4E-22 8.1E-27 157.6 18.3 161 5-175 7-191 (753)
78 1sq9_A Antiviral protein SKI8; 99.9 5E-22 1.7E-26 144.5 18.8 160 8-176 122-325 (397)
79 2pm9_A Protein WEB1, protein t 99.9 3.9E-22 1.3E-26 145.8 18.2 159 7-178 165-342 (416)
80 3mmy_A MRNA export factor; mRN 99.9 1E-21 3.4E-26 141.1 19.7 115 6-133 38-162 (368)
81 4a11_B DNA excision repair pro 99.9 2.4E-21 8.3E-26 141.0 21.8 162 9-178 143-370 (408)
82 1k8k_C P40, ARP2/3 complex 41 99.9 8.8E-22 3E-26 141.9 19.2 160 8-176 53-236 (372)
83 3zwl_B Eukaryotic translation 99.9 4E-21 1.4E-25 138.0 22.4 152 9-175 177-348 (369)
84 3mmy_A MRNA export factor; mRN 99.9 6.4E-22 2.2E-26 142.1 17.2 132 39-177 26-164 (368)
85 3gre_A Serine/threonine-protei 99.9 2.1E-22 7.2E-27 148.5 14.8 154 10-177 173-363 (437)
86 3lrv_A PRE-mRNA-splicing facto 99.9 1.6E-21 5.4E-26 139.9 18.9 154 8-176 126-295 (343)
87 2j04_A TAU60, YPL007P, hypothe 99.9 4.6E-22 1.6E-26 149.0 16.5 116 50-176 83-214 (588)
88 4a11_B DNA excision repair pro 99.9 3.8E-21 1.3E-25 140.0 21.1 171 6-177 42-280 (408)
89 3i2n_A WD repeat-containing pr 99.9 8.6E-22 2.9E-26 141.2 17.1 158 9-176 166-356 (357)
90 4aez_A CDC20, WD repeat-contai 99.9 1.6E-21 5.5E-26 142.6 18.4 157 7-178 217-385 (401)
91 1r5m_A SIR4-interacting protei 99.9 1.4E-21 4.9E-26 142.8 18.1 155 7-176 149-322 (425)
92 2pm9_A Protein WEB1, protein t 99.9 6.8E-22 2.3E-26 144.5 16.1 163 8-176 114-297 (416)
93 2w18_A PALB2, fancn, partner a 99.9 2.9E-21 1E-25 136.8 18.3 144 12-172 183-356 (356)
94 4gq1_A NUP37; propeller, trans 99.9 1.1E-22 3.9E-27 148.5 11.1 154 15-176 97-289 (393)
95 2oaj_A Protein SNI1; WD40 repe 99.9 1.1E-21 3.9E-26 156.2 17.7 158 8-176 59-245 (902)
96 3vu4_A KMHSV2; beta-propeller 99.9 9.6E-21 3.3E-25 136.6 21.0 106 69-176 155-274 (355)
97 3i2n_A WD repeat-containing pr 99.9 4.9E-21 1.7E-25 137.2 18.9 157 6-176 17-202 (357)
98 4aow_A Guanine nucleotide-bind 99.9 2.2E-21 7.7E-26 138.2 17.0 133 40-175 26-161 (340)
99 1pgu_A Actin interacting prote 99.9 9.4E-21 3.2E-25 144.7 21.3 153 7-176 116-286 (615)
100 3gre_A Serine/threonine-protei 99.9 1.2E-21 4.2E-26 144.4 15.9 161 7-175 111-294 (437)
101 2oaj_A Protein SNI1; WD40 repe 99.9 1.8E-21 6.2E-26 155.1 17.9 151 8-175 18-184 (902)
102 3jro_A Fusion protein of prote 99.9 8.2E-21 2.8E-25 148.9 21.1 160 7-175 53-240 (753)
103 3mkq_A Coatomer beta'-subunit; 99.9 5.7E-21 1.9E-25 150.4 19.7 157 7-175 55-219 (814)
104 1yfq_A Cell cycle arrest prote 99.9 4.3E-21 1.5E-25 136.9 17.2 155 6-176 10-183 (342)
105 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.1E-20 3.6E-25 140.2 19.9 121 50-177 100-233 (450)
106 1pgu_A Actin interacting prote 99.9 6.2E-21 2.1E-25 145.6 18.7 160 9-177 20-242 (615)
107 3v7d_B Cell division control p 99.9 2E-20 6.8E-25 138.9 20.7 147 16-176 129-302 (464)
108 3v7d_B Cell division control p 99.9 1.6E-20 5.3E-25 139.5 19.9 157 10-176 206-384 (464)
109 3dw8_B Serine/threonine-protei 99.9 4.1E-21 1.4E-25 141.7 15.9 160 7-176 177-376 (447)
110 4gga_A P55CDC, cell division c 99.9 2.8E-20 9.5E-25 136.9 19.8 150 11-177 109-265 (420)
111 1p22_A F-BOX/WD-repeat protein 99.9 4.2E-20 1.5E-24 136.4 20.4 144 15-176 139-288 (435)
112 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-21 5.5E-26 144.2 12.1 161 10-172 39-222 (434)
113 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3.9E-20 1.3E-24 136.8 19.3 143 14-175 124-270 (445)
114 3odt_A Protein DOA1; ubiquitin 99.9 1.1E-19 3.6E-24 128.1 20.0 154 8-177 60-218 (313)
115 1yfq_A Cell cycle arrest prote 99.9 4.9E-20 1.7E-24 131.4 17.7 164 6-176 100-285 (342)
116 1p22_A F-BOX/WD-repeat protein 99.9 1.9E-19 6.6E-24 132.9 20.7 149 10-176 176-328 (435)
117 3sfz_A APAF-1, apoptotic pepti 99.9 9.8E-20 3.4E-24 149.1 20.1 126 43-176 606-735 (1249)
118 3vu4_A KMHSV2; beta-propeller 99.9 7.3E-20 2.5E-24 132.0 16.9 125 45-176 188-339 (355)
119 2w18_A PALB2, fancn, partner a 99.8 2.8E-19 9.6E-24 126.7 18.4 159 9-176 113-317 (356)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 5.3E-19 1.8E-23 130.8 20.8 147 9-176 161-311 (445)
121 4gq1_A NUP37; propeller, trans 99.8 1.2E-19 4E-24 132.6 16.7 163 7-177 136-352 (393)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 1.2E-19 4E-24 134.3 16.4 158 9-175 94-280 (434)
123 4ggc_A P55CDC, cell division c 99.8 2.3E-19 8E-24 126.6 16.6 117 54-176 27-184 (318)
124 4h5i_A Guanine nucleotide-exch 99.8 5.1E-19 1.7E-23 128.1 14.7 115 8-132 220-344 (365)
125 1l0q_A Surface layer protein; 99.8 1.9E-16 6.6E-21 114.9 20.1 148 10-175 34-191 (391)
126 3bws_A Protein LP49; two-domai 99.8 4.5E-17 1.5E-21 119.8 15.0 149 11-175 126-294 (433)
127 1l0q_A Surface layer protein; 99.7 9.6E-16 3.3E-20 111.3 20.3 149 9-175 117-277 (391)
128 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.9E-15 6.6E-20 111.1 21.5 157 9-176 180-347 (415)
129 3bws_A Protein LP49; two-domai 99.7 7.3E-16 2.5E-20 113.3 18.4 150 9-175 171-336 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 1.6E-14 5.6E-19 106.2 19.9 155 8-174 223-388 (415)
131 2ojh_A Uncharacterized protein 99.6 9.7E-14 3.3E-18 96.5 17.1 160 10-176 87-261 (297)
132 2ojh_A Uncharacterized protein 99.6 3.4E-13 1.2E-17 93.7 16.9 150 8-173 42-204 (297)
133 1nir_A Nitrite reductase; hemo 99.6 5.2E-13 1.8E-17 101.4 18.4 155 10-176 181-358 (543)
134 1xfd_A DIP, dipeptidyl aminope 99.5 2.2E-14 7.7E-19 111.8 9.5 145 5-163 14-193 (723)
135 3vgz_A Uncharacterized protein 99.5 1.4E-12 5E-17 93.1 18.3 160 8-176 41-218 (353)
136 3vgz_A Uncharacterized protein 99.5 1.6E-12 5.5E-17 92.8 18.3 157 10-176 91-265 (353)
137 1k32_A Tricorn protease; prote 99.5 4E-13 1.4E-17 108.9 16.7 148 10-175 298-463 (1045)
138 2ecf_A Dipeptidyl peptidase IV 99.5 2.8E-13 9.7E-18 105.9 14.7 146 9-164 38-230 (741)
139 3u4y_A Uncharacterized protein 99.5 8.1E-12 2.8E-16 88.6 20.7 155 12-176 44-210 (331)
140 2z3z_A Dipeptidyl aminopeptida 99.5 2.7E-13 9.1E-18 105.6 13.4 150 9-174 83-294 (706)
141 1nir_A Nitrite reductase; hemo 99.5 2.6E-12 9E-17 97.5 18.2 145 14-175 144-313 (543)
142 3o4h_A Acylamino-acid-releasin 99.5 4.4E-13 1.5E-17 102.4 13.1 106 56-171 153-274 (582)
143 1xfd_A DIP, dipeptidyl aminope 99.5 4.3E-13 1.5E-17 104.6 13.2 156 10-175 63-291 (723)
144 1ri6_A Putative isomerase YBHE 99.5 2E-12 6.9E-17 91.8 15.3 156 9-173 39-209 (343)
145 2ecf_A Dipeptidyl peptidase IV 99.5 4.2E-13 1.4E-17 105.0 12.2 150 10-175 111-323 (741)
146 1pby_B Quinohemoprotein amine 99.5 8.8E-12 3E-16 88.3 17.2 161 9-177 83-314 (337)
147 3hfq_A Uncharacterized protein 99.5 1.4E-11 4.9E-16 88.0 17.5 156 10-173 143-317 (347)
148 3scy_A Hypothetical bacterial 99.4 4.1E-11 1.4E-15 86.2 19.1 155 10-172 157-336 (361)
149 1k32_A Tricorn protease; prote 99.4 5.6E-12 1.9E-16 102.3 16.1 149 9-172 339-501 (1045)
150 3o4h_A Acylamino-acid-releasin 99.4 2.9E-12 9.9E-17 97.8 13.5 147 11-172 153-314 (582)
151 3hfq_A Uncharacterized protein 99.4 2.5E-11 8.4E-16 86.8 17.5 155 10-173 42-218 (347)
152 1z68_A Fibroblast activation p 99.4 7.6E-13 2.6E-17 103.3 9.5 142 6-163 14-189 (719)
153 1ri6_A Putative isomerase YBHE 99.4 4.8E-11 1.7E-15 84.7 17.4 155 10-172 131-307 (343)
154 2z3z_A Dipeptidyl aminopeptida 99.4 5.7E-12 1.9E-16 98.1 13.2 156 10-172 123-341 (706)
155 1xip_A Nucleoporin NUP159; bet 99.4 3.3E-11 1.1E-15 87.5 16.1 147 10-175 40-193 (388)
156 3u4y_A Uncharacterized protein 99.4 1.1E-10 3.7E-15 82.8 18.7 146 14-175 4-162 (331)
157 1jmx_B Amine dehydrogenase; ox 99.4 2.6E-11 8.7E-16 86.4 15.4 160 10-176 94-328 (349)
158 1q7f_A NHL, brain tumor CG1071 99.3 1.1E-09 3.8E-14 76.2 20.8 150 9-176 122-283 (286)
159 1jof_A Carboxy-CIS,CIS-muconat 99.3 8.2E-11 2.8E-15 84.9 14.8 160 9-174 146-342 (365)
160 1jmx_B Amine dehydrogenase; ox 99.3 3.5E-11 1.2E-15 85.7 12.6 148 12-176 4-178 (349)
161 3scy_A Hypothetical bacterial 99.3 1.4E-09 4.8E-14 78.1 20.4 162 11-174 53-243 (361)
162 3azo_A Aminopeptidase; POP fam 99.3 7.5E-11 2.6E-15 91.2 13.6 149 16-174 87-275 (662)
163 1pby_B Quinohemoprotein amine 99.3 2.7E-10 9.4E-15 80.6 14.9 124 41-175 20-165 (337)
164 3azo_A Aminopeptidase; POP fam 99.3 2.1E-10 7.1E-15 88.8 15.0 160 7-172 129-322 (662)
165 1jof_A Carboxy-CIS,CIS-muconat 99.3 5.7E-10 1.9E-14 80.5 16.0 154 10-173 42-224 (365)
166 4a5s_A Dipeptidyl peptidase 4 99.2 7.2E-11 2.5E-15 92.7 10.7 140 7-162 16-190 (740)
167 3pe7_A Oligogalacturonate lyas 99.2 1.2E-09 4E-14 79.1 15.6 153 13-174 41-226 (388)
168 1z68_A Fibroblast activation p 99.2 5.5E-11 1.9E-15 92.9 8.5 109 56-175 19-141 (719)
169 3fvz_A Peptidyl-glycine alpha- 99.2 1.9E-08 6.6E-13 71.5 20.6 160 9-175 25-229 (329)
170 4a5s_A Dipeptidyl peptidase 4 99.1 3.2E-10 1.1E-14 89.0 10.2 112 53-175 17-143 (740)
171 1xip_A Nucleoporin NUP159; bet 99.1 5E-09 1.7E-13 76.1 15.4 127 10-159 90-230 (388)
172 3fvz_A Peptidyl-glycine alpha- 99.1 1.8E-07 6E-12 66.6 21.6 149 9-174 144-323 (329)
173 2dg1_A DRP35, lactonase; beta 99.1 1E-07 3.5E-12 67.6 20.2 148 10-173 47-213 (333)
174 2xdw_A Prolyl endopeptidase; a 99.1 4.6E-08 1.6E-12 76.5 19.7 162 9-175 126-322 (710)
175 1rwi_B Serine/threonine-protei 99.1 2.5E-08 8.4E-13 68.6 16.3 154 9-177 109-268 (270)
176 1q7f_A NHL, brain tumor CG1071 99.1 6.8E-08 2.3E-12 67.1 18.6 147 9-173 31-194 (286)
177 2oiz_A Aromatic amine dehydrog 99.0 2.3E-08 7.9E-13 72.2 15.9 65 105-174 259-335 (361)
178 2bkl_A Prolyl endopeptidase; m 99.0 3E-08 1E-12 77.4 16.5 160 9-175 122-306 (695)
179 3pe7_A Oligogalacturonate lyas 99.0 1E-08 3.5E-13 74.1 12.5 129 39-175 17-179 (388)
180 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 2.9E-07 9.9E-12 64.6 19.3 157 10-176 119-302 (314)
181 2dg1_A DRP35, lactonase; beta 99.0 1.2E-07 4.2E-12 67.2 16.9 124 42-173 34-171 (333)
182 3e5z_A Putative gluconolactona 99.0 3.6E-07 1.2E-11 63.8 18.9 152 9-172 29-201 (296)
183 3e5z_A Putative gluconolactona 98.9 1.8E-07 6.1E-12 65.3 16.6 122 45-177 164-290 (296)
184 1rwi_B Serine/threonine-protei 98.9 1.2E-07 4.2E-12 65.1 15.4 150 9-175 25-182 (270)
185 2xdw_A Prolyl endopeptidase; a 98.9 2.3E-08 8E-13 78.2 11.7 115 51-173 123-268 (710)
186 3c5m_A Oligogalacturonate lyas 98.9 6.5E-09 2.2E-13 75.2 8.0 155 11-175 39-227 (396)
187 2gop_A Trilobed protease; beta 98.9 3E-07 1E-11 65.5 15.8 146 10-173 106-291 (347)
188 3no2_A Uncharacterized protein 98.8 1.2E-07 4E-12 66.0 13.1 151 9-176 38-198 (276)
189 2bkl_A Prolyl endopeptidase; m 98.8 1.9E-08 6.4E-13 78.6 9.9 115 51-172 119-260 (695)
190 3g4e_A Regucalcin; six bladed 98.8 2E-06 7E-11 60.2 17.9 149 9-161 99-261 (297)
191 1yr2_A Prolyl oligopeptidase; 98.8 6.5E-07 2.2E-11 70.4 16.8 162 9-174 164-351 (741)
192 2gop_A Trilobed protease; beta 98.8 2.6E-07 8.7E-12 65.8 13.5 143 11-170 62-250 (347)
193 3dsm_A Uncharacterized protein 98.8 2.8E-06 9.5E-11 60.4 18.4 150 8-176 84-256 (328)
194 3no2_A Uncharacterized protein 98.8 6E-07 2E-11 62.4 14.4 127 38-176 21-157 (276)
195 2oiz_A Aromatic amine dehydrog 98.7 3.4E-07 1.2E-11 66.0 12.6 123 39-173 38-182 (361)
196 3c5m_A Oligogalacturonate lyas 98.7 1.2E-06 4E-11 63.3 15.2 156 10-177 190-388 (396)
197 2z2n_A Virginiamycin B lyase; 98.7 7.5E-06 2.6E-10 56.7 18.7 146 9-171 16-169 (299)
198 1qks_A Cytochrome CD1 nitrite 98.7 6.1E-06 2.1E-10 63.0 19.4 159 7-175 196-375 (567)
199 2z2n_A Virginiamycin B lyase; 98.7 9.9E-06 3.4E-10 56.1 18.4 146 9-171 58-211 (299)
200 1yr2_A Prolyl oligopeptidase; 98.6 3.8E-07 1.3E-11 71.8 11.1 113 53-174 163-304 (741)
201 3hrp_A Uncharacterized protein 98.6 6.2E-06 2.1E-10 60.5 16.4 117 51-174 217-355 (409)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 2.1E-05 7.3E-10 55.0 18.1 143 10-172 20-206 (314)
203 3dsm_A Uncharacterized protein 98.6 5.8E-06 2E-10 58.7 15.2 127 38-175 70-214 (328)
204 3g4e_A Regucalcin; six bladed 98.6 6.3E-06 2.2E-10 57.7 14.8 155 8-175 54-231 (297)
205 2ghs_A AGR_C_1268P; regucalcin 98.5 5.7E-05 1.9E-09 53.6 19.8 143 9-163 135-293 (326)
206 1qks_A Cytochrome CD1 nitrite 98.5 6.3E-06 2.2E-10 63.0 15.0 105 62-176 165-278 (567)
207 2ghs_A AGR_C_1268P; regucalcin 98.5 3.9E-05 1.3E-09 54.4 18.0 147 9-172 50-209 (326)
208 3dr2_A Exported gluconolactona 98.5 2.5E-05 8.6E-10 54.8 16.7 154 9-174 46-225 (305)
209 2qc5_A Streptogramin B lactona 98.5 7.8E-05 2.7E-09 51.6 18.7 147 9-171 21-174 (300)
210 3iuj_A Prolyl endopeptidase; h 98.4 3E-05 1E-09 60.7 17.5 161 9-175 130-316 (693)
211 2qe8_A Uncharacterized protein 98.4 2E-05 6.7E-10 56.4 15.1 149 7-170 16-223 (343)
212 3hrp_A Uncharacterized protein 98.4 1.9E-05 6.5E-10 57.9 15.1 113 53-175 131-251 (409)
213 2qc5_A Streptogramin B lactona 98.4 0.00014 4.6E-09 50.3 18.8 147 9-171 63-216 (300)
214 3sjl_D Methylamine dehydrogena 98.4 1.6E-05 5.5E-10 57.7 13.7 148 13-173 38-208 (386)
215 2mad_H Methylamine dehydrogena 98.3 0.00026 8.7E-09 51.3 18.1 120 40-175 55-197 (373)
216 2hz6_A Endoplasmic reticulum t 98.2 1.3E-07 4.4E-12 68.5 -0.1 106 62-177 8-115 (369)
217 2iwa_A Glutamine cyclotransfer 98.2 0.00053 1.8E-08 47.3 16.5 155 10-176 23-184 (266)
218 3iuj_A Prolyl endopeptidase; h 98.2 0.00039 1.3E-08 54.4 17.8 157 10-175 236-407 (693)
219 2hz6_A Endoplasmic reticulum t 98.1 3E-07 1E-11 66.6 -0.1 126 38-178 25-154 (369)
220 2mad_H Methylamine dehydrogena 98.1 0.001 3.5E-08 48.1 17.3 150 12-174 70-244 (373)
221 3sjl_D Methylamine dehydrogena 98.0 7.1E-05 2.4E-09 54.4 9.8 95 72-176 58-172 (386)
222 3hxj_A Pyrrolo-quinoline quino 98.0 0.00015 5.1E-09 51.0 11.2 125 41-176 203-327 (330)
223 3nol_A Glutamine cyclotransfer 98.0 0.0016 5.5E-08 44.6 15.9 152 9-176 44-204 (262)
224 3dr2_A Exported gluconolactona 98.0 0.00051 1.7E-08 48.1 13.7 106 42-159 34-147 (305)
225 1npe_A Nidogen, entactin; glyc 97.9 0.0019 6.3E-08 44.2 18.9 156 9-175 80-240 (267)
226 3nok_A Glutaminyl cyclase; bet 97.9 0.00031 1E-08 48.3 11.3 121 44-176 45-167 (268)
227 2qe8_A Uncharacterized protein 97.9 0.00034 1.1E-08 49.9 11.8 121 53-175 17-156 (343)
228 1kb0_A Quinohemoprotein alcoho 97.9 0.0014 4.9E-08 51.2 16.1 54 122-177 457-511 (677)
229 1yiq_A Quinohemoprotein alcoho 97.8 0.0027 9.1E-08 49.8 17.0 55 121-177 454-509 (689)
230 3mbr_X Glutamine cyclotransfer 97.8 0.0023 7.9E-08 43.4 14.2 121 44-176 11-136 (243)
231 3c75_H MADH, methylamine dehyd 97.8 0.00086 2.9E-08 49.5 12.7 124 38-173 105-248 (426)
232 3hxj_A Pyrrolo-quinoline quino 97.7 0.00046 1.6E-08 48.5 10.6 116 43-171 127-242 (330)
233 2iwa_A Glutamine cyclotransfer 97.7 0.0046 1.6E-07 42.6 15.8 123 43-176 10-138 (266)
234 3nol_A Glutamine cyclotransfer 97.7 0.0028 9.5E-08 43.5 13.2 119 44-176 33-158 (262)
235 2xe4_A Oligopeptidase B; hydro 97.6 0.008 2.7E-07 47.6 17.2 157 9-173 175-354 (751)
236 2ece_A 462AA long hypothetical 97.6 0.00073 2.5E-08 50.0 10.4 153 12-172 86-288 (462)
237 3c75_H MADH, methylamine dehyd 97.6 0.00044 1.5E-08 51.0 9.1 94 73-176 99-212 (426)
238 3nok_A Glutaminyl cyclase; bet 97.6 0.0074 2.5E-07 41.5 17.9 125 39-176 82-213 (268)
239 1npe_A Nidogen, entactin; glyc 97.6 0.0074 2.5E-07 41.2 21.2 155 10-173 38-198 (267)
240 3q7m_A Lipoprotein YFGL, BAMB; 97.6 0.0052 1.8E-07 44.1 14.3 104 62-177 102-211 (376)
241 3mbr_X Glutamine cyclotransfer 97.5 0.0086 2.9E-07 40.6 17.4 153 10-176 23-182 (243)
242 3q7m_A Lipoprotein YFGL, BAMB; 97.5 0.005 1.7E-07 44.2 13.4 105 62-177 52-166 (376)
243 3tc9_A Hypothetical hydrolase; 97.5 0.018 6E-07 42.5 16.9 123 45-173 171-301 (430)
244 1mda_H Methylamine dehydrogena 97.4 0.00057 2E-08 49.4 7.7 98 66-173 35-158 (368)
245 1mda_H Methylamine dehydrogena 97.3 0.0011 3.9E-08 47.9 8.3 121 38-173 52-194 (368)
246 2fp8_A Strictosidine synthase; 97.3 0.022 7.5E-07 40.0 17.7 116 54-177 186-317 (322)
247 3v65_B Low-density lipoprotein 97.3 0.028 9.5E-07 40.8 17.3 154 10-173 118-277 (386)
248 3v64_C Agrin; beta propeller, 97.3 0.027 9.2E-07 40.3 18.8 155 10-173 75-234 (349)
249 1kv9_A Type II quinohemoprotei 97.2 0.03 1E-06 43.8 15.3 55 121-177 437-492 (668)
250 3pbp_A Nucleoporin NUP82; beta 97.2 0.04 1.4E-06 40.6 15.6 115 54-169 67-208 (452)
251 3pbp_A Nucleoporin NUP82; beta 97.1 0.013 4.6E-07 43.0 11.3 115 11-127 69-208 (452)
252 4a2l_A BT_4663, two-component 97.0 0.05 1.7E-06 43.3 15.5 115 53-175 310-438 (795)
253 2ece_A 462AA long hypothetical 97.0 0.019 6.4E-07 42.6 11.8 104 66-174 99-238 (462)
254 4a2l_A BT_4663, two-component 96.9 0.11 3.7E-06 41.4 16.9 118 53-174 357-481 (795)
255 1yiq_A Quinohemoprotein alcoho 96.9 0.039 1.3E-06 43.3 13.6 72 104-177 239-342 (689)
256 2ad6_A Methanol dehydrogenase 96.9 0.019 6.6E-07 44.0 11.7 55 121-177 443-498 (571)
257 2xe4_A Oligopeptidase B; hydro 96.9 0.017 5.9E-07 45.7 11.6 112 54-174 175-305 (751)
258 3v65_B Low-density lipoprotein 96.9 0.072 2.5E-06 38.7 21.0 117 52-175 201-320 (386)
259 2p4o_A Hypothetical protein; p 96.8 0.066 2.3E-06 37.3 17.7 122 42-173 22-147 (306)
260 3p5b_L Low density lipoprotein 96.8 0.087 3E-06 38.4 20.9 158 10-174 114-278 (400)
261 3m0c_C LDL receptor, low-densi 96.8 0.15 5E-06 40.9 20.3 158 10-174 426-590 (791)
262 1flg_A Protein (quinoprotein e 96.8 0.021 7.3E-07 43.9 10.9 56 121-178 465-521 (582)
263 1k3i_A Galactose oxidase precu 96.7 0.067 2.3E-06 41.6 13.4 112 57-174 190-324 (656)
264 1kb0_A Quinohemoprotein alcoho 96.7 0.023 7.7E-07 44.6 10.6 92 73-173 457-567 (677)
265 1tl2_A L10, protein (tachylect 96.6 0.0087 3E-07 40.0 6.7 110 52-167 40-157 (236)
266 1fwx_A Nitrous oxide reductase 96.5 0.19 6.5E-06 38.7 14.7 73 100-173 277-361 (595)
267 1ijq_A LDL receptor, low-densi 96.5 0.12 4.1E-06 36.3 20.4 157 10-173 32-195 (316)
268 3v64_C Agrin; beta propeller, 96.5 0.13 4.6E-06 36.7 21.1 117 51-174 157-276 (349)
269 4hw6_A Hypothetical protein, I 96.4 0.17 5.8E-06 37.4 16.5 152 10-172 141-303 (433)
270 3v9f_A Two-component system se 96.4 0.23 7.8E-06 39.5 14.8 112 52-174 406-525 (781)
271 2p9w_A MAL S 1 allergenic prot 96.3 0.17 5.7E-06 36.0 14.4 113 55-174 65-216 (334)
272 1n7d_A LDL receptor, low-densi 96.1 0.024 8.3E-07 44.6 8.0 112 55-173 455-571 (699)
273 1w6s_A Methanol dehydrogenase 96.1 0.15 5.3E-06 39.3 11.9 56 121-178 452-508 (599)
274 3v9f_A Two-component system se 96.0 0.43 1.5E-05 37.9 15.2 115 52-175 449-570 (781)
275 2ism_A Putative oxidoreductase 95.9 0.26 8.9E-06 35.2 11.8 103 52-160 30-151 (352)
276 2fp8_A Strictosidine synthase; 95.8 0.28 9.5E-06 34.3 15.2 117 48-174 14-175 (322)
277 1k3i_A Galactose oxidase precu 95.8 0.24 8.1E-06 38.6 12.1 70 105-175 404-499 (656)
278 3qqz_A Putative uncharacterize 95.8 0.26 9.1E-06 33.6 14.7 118 47-172 21-150 (255)
279 1ijq_A LDL receptor, low-densi 95.7 0.31 1.1E-05 34.2 22.2 117 51-175 118-240 (316)
280 1n7d_A LDL receptor, low-densi 95.7 0.073 2.5E-06 41.9 9.1 114 53-173 496-614 (699)
281 1tl2_A L10, protein (tachylect 95.7 0.26 8.7E-06 33.1 12.0 149 11-166 44-203 (236)
282 3tc9_A Hypothetical hydrolase; 95.7 0.4 1.4E-05 35.4 12.5 112 54-174 138-258 (430)
283 3sov_A LRP-6, low-density lipo 95.7 0.34 1.2E-05 34.1 22.2 119 51-176 120-241 (318)
284 1fwx_A Nitrous oxide reductase 95.6 0.029 1E-06 43.0 6.3 107 54-162 278-407 (595)
285 2xbg_A YCF48-like protein; pho 95.5 0.4 1.4E-05 33.8 16.0 114 51-171 203-320 (327)
286 3sov_A LRP-6, low-density lipo 95.4 0.43 1.5E-05 33.6 20.2 156 10-173 37-197 (318)
287 1kv9_A Type II quinohemoprotei 95.4 0.5 1.7E-05 37.0 12.7 72 104-177 234-337 (668)
288 2xbg_A YCF48-like protein; pho 95.1 0.55 1.9E-05 33.1 18.1 107 53-169 122-230 (327)
289 4hw6_A Hypothetical protein, I 95.1 0.71 2.4E-05 34.1 12.6 112 54-174 140-260 (433)
290 1w6s_A Methanol dehydrogenase 94.7 0.43 1.5E-05 36.9 10.3 106 63-177 62-195 (599)
291 4a0p_A LRP6, LRP-6, low-densit 94.7 1.2 4.1E-05 34.7 19.2 154 10-174 39-198 (628)
292 3kya_A Putative phosphatase; s 94.6 1.1 3.6E-05 33.9 14.0 116 54-173 187-341 (496)
293 3p5b_L Low density lipoprotein 94.5 0.97 3.3E-05 32.9 23.2 119 51-176 200-323 (400)
294 3m0c_C LDL receptor, low-densi 94.4 1.6 5.4E-05 35.1 21.8 155 11-175 474-634 (791)
295 2be1_A Serine/threonine-protei 94.3 0.057 1.9E-06 38.6 4.4 109 63-178 10-135 (339)
296 3ei3_A DNA damage-binding prot 94.1 2.3 8E-05 35.7 18.6 111 54-172 515-635 (1158)
297 2p4o_A Hypothetical protein; p 93.8 1.1 3.8E-05 31.0 18.7 155 8-173 32-198 (306)
298 3qqz_A Putative uncharacterize 93.7 1.1 3.7E-05 30.6 19.7 159 9-173 28-204 (255)
299 2ad6_A Methanol dehydrogenase 93.7 1.1 3.7E-05 34.4 10.7 104 63-177 62-189 (571)
300 3s94_A LRP-6, low-density lipo 93.6 2 6.7E-05 33.4 18.9 156 10-173 42-202 (619)
301 3a9g_A Putative uncharacterize 93.5 1.5 5E-05 31.4 12.4 103 51-159 27-151 (354)
302 2g8s_A Glucose/sorbosone dehyd 93.1 1.7 5.9E-05 31.0 13.3 79 52-131 17-107 (353)
303 2xn4_A Kelch-like protein 2; s 92.7 1.5 5E-05 30.2 9.5 93 73-174 173-277 (302)
304 3das_A Putative oxidoreductase 92.7 2 6.9E-05 30.8 11.4 83 45-131 24-116 (347)
305 4a0p_A LRP6, LRP-6, low-densit 92.4 3.1 0.00011 32.4 20.1 116 51-175 121-239 (628)
306 2vpj_A Kelch-like protein 12; 92.3 1.8 6E-05 29.8 9.5 104 63-174 159-279 (301)
307 2xn4_A Kelch-like protein 2; s 91.7 2 7E-05 29.5 9.2 104 63-174 108-230 (302)
308 4asc_A Kelch repeat and BTB do 91.5 2.3 7.8E-05 29.5 9.4 100 66-174 152-278 (315)
309 3ei3_A DNA damage-binding prot 90.9 6.6 0.00022 33.1 14.8 115 51-174 884-1000(1158)
310 3s94_A LRP-6, low-density lipo 90.7 4.9 0.00017 31.2 19.8 156 10-174 351-511 (619)
311 1flg_A Protein (quinoprotein e 90.0 0.77 2.6E-05 35.3 6.2 80 72-160 465-547 (582)
312 1zgk_A Kelch-like ECH-associat 89.1 4.2 0.00014 28.1 9.0 103 63-174 168-288 (308)
313 1cru_A Protein (soluble quinop 88.4 6.3 0.00021 29.3 13.7 110 46-159 20-160 (454)
314 3amr_A 3-phytase; beta-propell 88.3 5.6 0.00019 28.6 13.2 99 65-173 42-162 (355)
315 2xzh_A Clathrin heavy chain 1; 88.1 5.7 0.00019 28.5 18.7 132 41-174 188-333 (365)
316 1zgk_A Kelch-like ECH-associat 88.0 3.9 0.00013 28.3 8.2 104 63-174 121-241 (308)
317 3ii7_A Kelch-like protein 7; p 87.6 5.2 0.00018 27.5 10.1 103 63-174 55-179 (306)
318 4asc_A Kelch repeat and BTB do 87.4 4.4 0.00015 28.0 8.3 93 73-174 117-222 (315)
319 3ii7_A Kelch-like protein 7; p 87.1 5.6 0.00019 27.3 9.6 101 66-174 15-128 (306)
320 2woz_A Kelch repeat and BTB do 87.0 5.9 0.0002 27.4 9.3 94 73-174 175-288 (318)
321 3a9g_A Putative uncharacterize 86.7 6.8 0.00023 27.9 13.7 143 10-159 31-213 (354)
322 3ott_A Two-component system se 85.1 13 0.00043 29.5 13.7 112 53-174 146-261 (758)
323 2ism_A Putative oxidoreductase 84.1 9.3 0.00032 27.2 14.7 31 144-174 268-298 (352)
324 2vpj_A Kelch-like protein 12; 83.8 8.3 0.00028 26.3 11.8 104 63-174 62-185 (301)
325 2woz_A Kelch repeat and BTB do 83.4 9 0.00031 26.5 9.2 62 111-174 158-232 (318)
326 2p9w_A MAL S 1 allergenic prot 82.5 11 0.00038 26.8 15.7 116 47-168 7-163 (334)
327 3ott_A Two-component system se 81.2 19 0.00063 28.5 12.1 119 53-175 419-547 (758)
328 4gq2_M Nucleoporin NUP120; bet 81.0 22 0.00075 29.3 13.8 33 101-134 237-269 (950)
329 1bpo_A Protein (clathrin); cla 81.0 15 0.00053 27.5 20.1 164 9-174 152-332 (494)
330 2zwa_A Leucine carboxyl methyl 78.0 24 0.00081 27.9 12.2 111 63-174 500-636 (695)
331 3kya_A Putative phosphatase; s 76.1 23 0.00079 26.8 12.6 109 55-172 141-277 (496)
332 4gq2_M Nucleoporin NUP120; bet 75.7 3.4 0.00012 33.9 4.5 31 145-175 237-268 (950)
333 3sbq_A Nitrous-oxide reductase 74.7 25 0.00085 27.4 8.4 75 99-174 322-409 (638)
334 1cru_A Protein (soluble quinop 72.3 27 0.00093 25.9 14.5 106 10-119 29-162 (454)
335 2xzh_A Clathrin heavy chain 1; 71.4 26 0.00088 25.3 16.7 153 5-174 64-237 (365)
336 3amr_A 3-phytase; beta-propell 69.4 29 0.00098 25.0 15.4 118 53-172 128-262 (355)
337 3f7f_A Nucleoporin NUP120; nuc 68.0 12 0.00041 29.8 5.7 30 102-134 224-253 (729)
338 3f7f_A Nucleoporin NUP120; nuc 67.1 7.7 0.00026 30.8 4.5 30 145-175 223-252 (729)
339 2wg3_C Hedgehog-interacting pr 67.1 37 0.0013 25.4 14.3 57 53-109 14-78 (463)
340 3sre_A PON1, serum paraoxonase 66.6 33 0.0011 24.6 16.0 114 53-173 112-252 (355)
341 1bpo_A Protein (clathrin); cla 64.2 44 0.0015 25.2 17.2 153 5-174 63-236 (494)
342 4fhn_B Nucleoporin NUP120; pro 63.9 6.6 0.00022 33.0 3.8 32 102-134 240-271 (1139)
343 2uvk_A YJHT; unknown function, 63.0 36 0.0012 23.8 11.6 50 122-171 168-224 (357)
344 2g8s_A Glucose/sorbosone dehyd 62.1 39 0.0013 23.9 11.6 107 52-160 65-214 (353)
345 4fhn_B Nucleoporin NUP120; pro 62.0 4.2 0.00014 34.1 2.4 30 147-176 241-271 (1139)
346 3sre_A PON1, serum paraoxonase 61.6 42 0.0014 24.1 13.3 99 54-161 166-285 (355)
347 1xi4_A Clathrin heavy chain; a 61.3 88 0.003 27.7 14.5 163 9-173 152-331 (1630)
348 3qhy_B Beta-lactamase inhibito 54.7 48 0.0017 22.7 12.6 107 54-175 103-209 (282)
349 2zwa_A Leucine carboxyl methyl 51.7 87 0.003 24.7 8.9 107 63-175 451-579 (695)
350 1ukf_A Avirulence protein AVRP 49.2 20 0.0007 23.1 3.4 35 143-177 118-154 (188)
351 3sbq_A Nitrous-oxide reductase 48.2 98 0.0033 24.3 9.3 77 53-131 323-408 (638)
352 2be1_A Serine/threonine-protei 47.5 55 0.0019 23.3 5.8 61 113-174 11-77 (339)
353 2uvk_A YJHT; unknown function, 47.2 70 0.0024 22.3 8.8 23 111-133 65-97 (357)
354 1xi4_A Clathrin heavy chain; a 45.2 1.7E+02 0.0057 26.1 11.3 153 5-174 63-236 (1630)
355 3das_A Putative oxidoreductase 36.7 1.1E+02 0.0039 21.8 11.0 74 99-173 31-116 (347)
356 3al9_A Plexin-A2; beta-propell 36.4 1.3E+02 0.0045 23.0 6.7 70 54-126 401-476 (539)
357 3zwu_A Alkaline phosphatase PH 33.0 1.7E+02 0.0059 22.7 8.5 56 102-159 478-547 (592)
358 3uc1_A DNA gyrase subunit A; D 31.3 1.4E+02 0.0047 21.1 15.9 121 52-175 94-230 (327)
359 3no0_A DNA gyrase subunit A; D 30.7 1.3E+02 0.0044 20.6 14.2 123 52-177 67-200 (276)
360 4a9v_A PHOX; hydrolase, beta-p 27.2 2.2E+02 0.0077 22.2 9.2 57 54-117 477-547 (592)
361 3qhy_B Beta-lactamase inhibito 22.4 1.9E+02 0.0065 19.7 15.6 106 54-174 142-247 (282)
362 4a9v_A PHOX; hydrolase, beta-p 20.8 3.1E+02 0.01 21.5 9.3 58 100-159 476-547 (592)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.8e-28 Score=173.53 Aligned_cols=157 Identities=22% Similarity=0.316 Sum_probs=136.5
Q ss_pred eeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 6 FGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
..-.+.+++|+|++.+++++. +++|+ ......+..+..|..+|.+++|+|++. |++|+.|+.|++||+
T Consensus 12 h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVELWN-------YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEE-------TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEE-------CCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 334578899999999988876 77774 345667788999999999999998755 899999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-C-cEEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIM 158 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~ 158 (183)
.+++. ...+.+|...|.+++|+| ++.++++|+.|+.|++||++++......+.+|...|.+++|+| + ..|+
T Consensus 85 ~~~~~------~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 157 (304)
T 2ynn_A 85 NTGEK------VVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (304)
T ss_dssp TTCCE------EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEE
T ss_pred CCCcE------EEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEE
Confidence 88765 667889999999999999 8889999999999999999987655677889999999999997 3 7999
Q ss_pred EecCCCcEEEEEecCCCC
Q psy2113 159 SGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~~ 176 (183)
+|+.|++|++||+++...
T Consensus 158 sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 158 SGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp EEETTSEEEEEETTCSSC
T ss_pred EEeCCCeEEEEECCCCCc
Confidence 999999999999976653
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=5.6e-28 Score=172.23 Aligned_cols=149 Identities=29% Similarity=0.523 Sum_probs=132.1
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++..++.+. +++|+ ....+.+..+.+|..+|.+++|+|++. |++|+.|+.|++||++..
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd-------~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFD-------IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEE-------CCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 467899999999999876 66664 446677888999999999999998876 889999999999999876
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQ 162 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~ 162 (183)
+. ...+.+|...|.+++|+| ++.+|++++.|+.|++||++++++ +..+.+|...|.+++|+++ .+|++++.
T Consensus 239 ~~------~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 239 NL------AGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTC-VHTFFDHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp CE------EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ce------eEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEE-EEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 64 567889999999999999 889999999999999999998876 7888899999999999975 89999999
Q ss_pred CCcEEEEEec
Q psy2113 163 DNSVRVFKTK 172 (183)
Q Consensus 163 dg~i~iwd~~ 172 (183)
||.|++||..
T Consensus 311 d~~i~vwd~p 320 (321)
T 3ow8_A 311 DQEIHIYDCP 320 (321)
T ss_dssp TCCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 9999999963
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=5.3e-28 Score=173.92 Aligned_cols=153 Identities=20% Similarity=0.285 Sum_probs=128.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEEEEcCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAEL 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~vwd~~~ 82 (183)
.+.+++|+|++..++.+. +++|+ ....+.+..+.+|.+.|.+++|++++ .|++++.|++|++||+++
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd-------~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWD-------LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEE-------CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc
Confidence 567899999999998876 67774 45677889999999999999999775 378999999999999988
Q ss_pred CCCccCceeEEEe--ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEE
Q psy2113 83 GGMKKGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIM 158 (183)
Q Consensus 83 ~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~ 158 (183)
++. ...+ ..+...+.+++|+|+++.++++|+.||.|++||+++++. +..+.+|...|++++|+|+ .+|+
T Consensus 202 ~~~------~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~fsp~g~~~la 274 (344)
T 4gqb_B 202 PKP------ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC-VLSSAVHSQCVTGLVFSPHSVPFLA 274 (344)
T ss_dssp SSC------EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C-CEEEECCSSCEEEEEECSSSSCCEE
T ss_pred cce------eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE-EEEEcCCCCCEEEEEEccCCCeEEE
Confidence 765 3333 345667999999997778999999999999999999886 7889999999999999975 5799
Q ss_pred EecCCCcEEEEEecCCC
Q psy2113 159 SGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~ 175 (183)
+|+.|++|++||+++++
T Consensus 275 sgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 275 SLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp EEETTSCEEEECTTCCE
T ss_pred EEeCCCeEEEEECCCCc
Confidence 99999999999988764
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=2e-27 Score=170.89 Aligned_cols=165 Identities=19% Similarity=0.217 Sum_probs=130.3
Q ss_pred eeEEEEEeecCcEEEEEE---eccCCCCcccc----cccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN---IEVTSLPSFFQ----LILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
...+++|+|+|.+++.+. +++|+...... .............|...|.+++|+|++.|++|+.||.|+|||++
T Consensus 32 ~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 32 QLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEETTSEEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEECCCEEEEEecc
Confidence 467899999999988765 55565321110 01111122233457788999999999999999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMS 159 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~ 159 (183)
+++... .......+|...|++++|+| ++++|++|+.|+.|++||+++++. +..+.+|...|++++|+++ .++++
T Consensus 112 ~~~~~~--~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~-~~~~~~h~~~V~~~~~~~~~~~~l~s 187 (344)
T 4gqb_B 112 ENETLI--VSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVV-LSSYRAHAAQVTCVAASPHKDSVFLS 187 (344)
T ss_dssp TTSSCE--EEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECSSCTTEEEE
T ss_pred CCCcee--EeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcE-EEEEcCcCCceEEEEecCCCCCceee
Confidence 876422 11234568999999999999 899999999999999999999876 8889999999999999964 57899
Q ss_pred ecCCCcEEEEEecCCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~~ 177 (183)
++.|++|++||+++++..
T Consensus 188 ~s~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 188 CSEDNRILLWDTRCPKPA 205 (344)
T ss_dssp EETTSCEEEEETTSSSCE
T ss_pred ecccccccccccccccee
Confidence 999999999999987654
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=7.7e-27 Score=167.47 Aligned_cols=156 Identities=26% Similarity=0.418 Sum_probs=134.6
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 84 (183)
.+.+++|+|++..++++. +++|++... .........+.+|.+.|.++.|++++.+++++.|+.|++||+++++
T Consensus 99 ~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~ 175 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGGLDNICSIYNLKTR---EGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQ 175 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTC---SBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEECccC---CCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCc
Confidence 356789999999998876 666765421 1223456678899999999999999999999999999999998766
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCC
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQD 163 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d 163 (183)
. ...+.+|...|.+++|+| ++.++++|+.|+.|++||++++.. ...+.+|...|++++|+|+ .+|++++.|
T Consensus 176 ~------~~~~~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l~s~s~d 247 (340)
T 1got_B 176 Q------TTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC-RQTFTGHESDINAICFFPNGNAFATGSDD 247 (340)
T ss_dssp E------EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSE-EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred E------EEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCee-EEEEcCCcCCEEEEEEcCCCCEEEEEcCC
Confidence 4 567889999999999999 889999999999999999999876 7788999999999999976 899999999
Q ss_pred CcEEEEEecCCC
Q psy2113 164 NSVRVFKTKHQP 175 (183)
Q Consensus 164 g~i~iwd~~~~~ 175 (183)
|.|++||+++.+
T Consensus 248 ~~v~iwd~~~~~ 259 (340)
T 1got_B 248 ATCRLFDLRADQ 259 (340)
T ss_dssp SCEEEEETTTTE
T ss_pred CcEEEEECCCCc
Confidence 999999998754
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=5.2e-27 Score=172.32 Aligned_cols=153 Identities=26% Similarity=0.342 Sum_probs=135.0
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+|++.+++.+. +++|+ ....+....+.+|.+.|.+++|+|++. |++|+.|++|++||+.+
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd-------~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWD-------YETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEE-------TTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEE-------CCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC
Confidence 3577889999999988875 77774 345667788999999999999998765 88999999999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
.+. ...+.+|...|.+++|+| ++.++++|+.|+.|++||++++.+ +..+.+|...|.++.|+++ .++++++
T Consensus 182 ~~~------~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~~~~g~~l~s~s 253 (410)
T 1vyh_C 182 FEC------IRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYC-VKTFTGHREWVRMVRPNQDGTLIASCS 253 (410)
T ss_dssp SCE------EECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred Cce------eEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcE-EEEEeCCCccEEEEEECCCCCEEEEEc
Confidence 654 567789999999999999 889999999999999999999886 7788999999999999965 8999999
Q ss_pred CCCcEEEEEecCCC
Q psy2113 162 QDNSVRVFKTKHQP 175 (183)
Q Consensus 162 ~dg~i~iwd~~~~~ 175 (183)
.|+.|++||+++++
T Consensus 254 ~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 254 NDQTVRVWVVATKE 267 (410)
T ss_dssp TTSCEEEEETTTCC
T ss_pred CCCeEEEEECCCCc
Confidence 99999999998764
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=3.6e-27 Score=168.09 Aligned_cols=152 Identities=20% Similarity=0.331 Sum_probs=132.4
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~ 84 (183)
+.+++|+|++..++++. +.+|+ ....+....+..|...|.+++|+|++. |++|+.|+.|++||+++++
T Consensus 125 ~~~~~~spdg~~l~~g~~dg~v~i~~-------~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 125 AWTLAFSPDSQYLATGTHVGKVNIFG-------VESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 197 (321)
T ss_dssp CCCEEECTTSSEEEEECTTSEEEEEE-------TTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEE-------cCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 45688999999998865 55563 345566778888999999999999876 8899999999999998776
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCC
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQD 163 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d 163 (183)
. ...+.+|...|.+++|+| ++.+|++|+.|+.|++||+++... ...+.+|...|.+++|+|+ .+|++++.|
T Consensus 198 ~------~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 198 L------LHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANL-AGTLSGHASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp E------EEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred E------EEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcce-eEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 4 667889999999999999 889999999999999999998876 7788999999999999976 899999999
Q ss_pred CcEEEEEecCCCC
Q psy2113 164 NSVRVFKTKHQPK 176 (183)
Q Consensus 164 g~i~iwd~~~~~~ 176 (183)
+.|++||+++++.
T Consensus 270 ~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 270 KSVKVWDVGTRTC 282 (321)
T ss_dssp SCEEEEETTTTEE
T ss_pred CcEEEEeCCCCEE
Confidence 9999999987653
No 8
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-26 Score=165.99 Aligned_cols=164 Identities=23% Similarity=0.379 Sum_probs=126.7
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
-.+.+++|+|++.+++.+. +++|++..........+.+..+.+|.+.|.+++|+|++. |++|+.|++|++||++.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 3577899999999988876 777765422111123456778899999999999998876 89999999999999954
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC-cceEEeccCCCcEEEEEecCC---cEEE
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDMLGHEDKVMCVNWSDY---RYIM 158 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~---~~l~ 158 (183)
... .......+.+|...|.+++|+| ++.+|++|+.|+.|++||.+++. .++..+.+|...|.+++|+|+ ..|+
T Consensus 139 ~~~--~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 139 SGE--EYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp TCC--CCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred CCC--CeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 321 1123456788999999999999 88999999999999999997652 236788899999999999964 5799
Q ss_pred EecCCCcEEEEEecCC
Q psy2113 159 SGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~ 174 (183)
+++.|++|++||++..
T Consensus 216 s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGD 231 (330)
T ss_dssp EEETTSCEEEEEEEEE
T ss_pred EEeCCCeEEEEEecCC
Confidence 9999999999999764
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=3.8e-26 Score=161.74 Aligned_cols=154 Identities=31% Similarity=0.495 Sum_probs=134.5
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
-.+.+++|+|++..++++. +++|+. ...+....+.+|...|.+++|+|++. |++++.|+.|++||+++
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGA-------YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEET-------TTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeC-------CCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC
Confidence 3567889999999988876 666643 34566778899999999999998865 88999999999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
.+. ...+.+|...|.+++|+| +++++++|+.|+.|++||+++++. ...+..|..+|.+++|+++ .++++++
T Consensus 97 ~~~------~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (312)
T 4ery_A 97 GKC------LKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSS 168 (312)
T ss_dssp CCE------EEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CcE------EEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEE-EEEecCCCCcEEEEEEcCCCCEEEEEe
Confidence 765 667889999999999999 889999999999999999998876 7788899999999999965 8999999
Q ss_pred CCCcEEEEEecCCCC
Q psy2113 162 QDNSVRVFKTKHQPK 176 (183)
Q Consensus 162 ~dg~i~iwd~~~~~~ 176 (183)
.||.|++||+++++.
T Consensus 169 ~d~~i~~wd~~~~~~ 183 (312)
T 4ery_A 169 YDGLCRIWDTASGQC 183 (312)
T ss_dssp TTSCEEEEETTTCCE
T ss_pred CCCcEEEEECCCCce
Confidence 999999999987653
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=9e-27 Score=168.25 Aligned_cols=166 Identities=20% Similarity=0.217 Sum_probs=124.6
Q ss_pred eeEEEEEeecCcEEEEEE---eccCCCCccccc----ccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN---IEVTSLPSFFQL----ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
.+.+++|+|+|.+++.+. .++|+....... ...........+|...|.+++|+|++.+++++.|++|++||+.
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~ 123 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEIL 123 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC---
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeecc
Confidence 367899999999999875 223332111111 1122334455679999999999999999999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMS 159 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~ 159 (183)
+++.... ......+|...|.+++|+| ++++|++|+.|+.|++||+++++. +..+.+|...|++++|+++ ..+++
T Consensus 124 ~~~~~~~--~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~-~~~~~~h~~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 124 EKESLLV--NKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAV-LKSYNAHSSEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp -----CC--CCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTCSSCEEE
T ss_pred ccceeEE--EeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcE-EEEEcCCCCCEEEEEEccCCCceeee
Confidence 7654221 1224457999999999999 899999999999999999999876 7888999999999999954 58999
Q ss_pred ecCCCcEEEEEecCCCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~~~ 178 (183)
++.||.|++||+++++...
T Consensus 200 ~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EETTSCEEECCTTSSSCBC
T ss_pred eccCCceEEEECCCCceee
Confidence 9999999999998876543
No 11
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=4.2e-26 Score=160.83 Aligned_cols=162 Identities=21% Similarity=0.369 Sum_probs=131.2
Q ss_pred ceeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc---CCeEEEEeCCCeEEE
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKI 77 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~~~d~~v~v 77 (183)
...-.+.+++|+|+|..++++. +++|++. ....+.+..+.+|.++|.+++|++ +..|++|+.|++|++
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~-----~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVE-----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBC-----SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecC-----CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 3444677899999999998876 7777542 123456788999999999999984 345999999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCC-CCEEEEEeCCCeEEEEeCCCCCc-ceEEeccCCCcEEEEEecCC-
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDNSVKLWDLRSPKV-PLFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~- 154 (183)
||++++.... ...+..|...|.+++|+|+. +.++++++.|+.|++||+++... ....+.+|...|.+++|+|.
T Consensus 82 Wd~~~~~~~~----~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 82 WKEENGRWSQ----IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEBSSSCBCC----CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEcCCCceEE----EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 9998654211 34567899999999999932 78999999999999999987632 24567899999999999974
Q ss_pred -------------cEEEEecCCCcEEEEEecCCC
Q psy2113 155 -------------RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 155 -------------~~l~~~~~dg~i~iwd~~~~~ 175 (183)
.+|++|+.|+.|++||+++.+
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp ------------CCEEEEEETTSCEEEEEEETTT
T ss_pred ccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 589999999999999998765
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=4.4e-26 Score=161.20 Aligned_cols=156 Identities=21% Similarity=0.386 Sum_probs=131.5
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++..++++. +++|+ ....+.+..+.+|.+.|.+++|+|++. +++|+.|++|++||+++.
T Consensus 57 ~v~~~~~~~~~~~l~s~s~d~~i~vwd-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 129 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFN-------YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129 (304)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEE-------TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT
T ss_pred cEEEEEEeCCCCEEEEECCCCEEEEEE-------CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC
Confidence 466889999999988876 77774 446677889999999999999998865 899999999999999765
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC--C-cEEEEe
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD--Y-RYIMSG 160 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~l~~~ 160 (183)
.. +...+.+|...|.+++|+|.++..+++|+.|+.|++||+++.........+|...+..+.|.+ + .+|+++
T Consensus 130 ~~-----~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 130 WA-----LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp TE-----EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEE
T ss_pred cc-----hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEE
Confidence 32 245678999999999999966789999999999999999887764555567778899999984 3 799999
Q ss_pred cCCCcEEEEEecCCCC
Q psy2113 161 GQDNSVRVFKTKHQPK 176 (183)
Q Consensus 161 ~~dg~i~iwd~~~~~~ 176 (183)
+.|+.|++||+++++.
T Consensus 205 s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 205 SDDLTIKIWDYQTKSC 220 (304)
T ss_dssp ETTSEEEEEETTTTEE
T ss_pred cCCCeEEEEeCCCCcc
Confidence 9999999999987643
No 13
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=2.9e-26 Score=166.09 Aligned_cols=156 Identities=15% Similarity=0.161 Sum_probs=117.8
Q ss_pred eEEEEEeecCcEEEEEE------eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCC
Q psy2113 10 TLGVIFMTVGALLTLTN------IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 83 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 83 (183)
.-.++|+|+|.+++++. +++|++ ...+++..+. |.+.|.+++|+|++.+++.+.++.+.+|+..++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~-------~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~ 207 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDP-------SDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTG 207 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEET-------TTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeEC-------CCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccC
Confidence 34689999999886543 677743 4555666665 777899999999887544444556666665543
Q ss_pred CCc------------------------------c----------------CceeEEEeecCCcceEEEEEecCCCCEEEE
Q psy2113 84 GMK------------------------------K----------------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVS 117 (183)
Q Consensus 84 ~~~------------------------------~----------------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 117 (183)
... . .......+.+|...|++++|+| ++++|++
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~las 286 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVL 286 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEE
Confidence 321 0 0001223557888999999999 8999999
Q ss_pred EeCCCeEEEEeCCCCCcceEE-eccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 118 ASFDNSVKLWDLRSPKVPLFD-MLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 118 ~~~dg~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
|+.|+.|++||+++++. +.. +.+|...|++++|+|+ .+|++|+.|++|+|||+....
T Consensus 287 gs~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 287 ASNDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EETTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EcCCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 99999999999999876 444 5789999999999976 899999999999999996543
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=5.6e-26 Score=163.34 Aligned_cols=158 Identities=23% Similarity=0.362 Sum_probs=130.1
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
-.+.+++|+|++.+++.+. +++|+.. ....+.+..+.+|.+.|.+++|+|++. |++|+.|+.|++||++.
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~-----~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKN-----QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEEC-----CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEcc-----CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 3567899999999998876 5666432 122345678899999999999998865 89999999999999976
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc-ceEEeccCCCcEEEEEecCC-cEEEEe
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV-PLFDMLGHEDKVMCVNWSDY-RYIMSG 160 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~-~~l~~~ 160 (183)
... ......+.+|...|.+++|+| ++.+|++++.|+.|++||.++... ....+.+|...|++++|+|+ .+|+++
T Consensus 137 ~~~---~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~ 212 (345)
T 3fm0_A 137 EDE---YECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASC 212 (345)
T ss_dssp TSC---EEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCC---eEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 542 122456778999999999999 889999999999999999987642 24678899999999999976 899999
Q ss_pred cCCCcEEEEEecCC
Q psy2113 161 GQDNSVRVFKTKHQ 174 (183)
Q Consensus 161 ~~dg~i~iwd~~~~ 174 (183)
+.|++|++||....
T Consensus 213 s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 213 SDDRTVRIWRQYLP 226 (345)
T ss_dssp ETTSCEEEEEEECT
T ss_pred eCCCeEEEeccccC
Confidence 99999999997654
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=2.8e-26 Score=165.65 Aligned_cols=157 Identities=16% Similarity=0.232 Sum_probs=132.1
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~vwd~~ 81 (183)
-.+.+++|+|++..++.+. +++| +....+.+..+.+|...|++++|++++ .+++++.|+.|++||++
T Consensus 140 ~~V~~v~~spdg~~l~sgs~dg~v~iw-------d~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKDFSVKVW-------DLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEE-------ETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEE-------ECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 3577899999999988876 6666 445677888999999999999999765 48999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMS 159 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~ 159 (183)
+++... ......+...+.+++|+|+++.++++|+.|+.|++||+++++. ...+.+|...|++++|+|+ .+|++
T Consensus 213 ~~~~~~----~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~-~~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 213 KPKPAT----RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDS-AQTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp SSSCBC----BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGG-CEEECCCSSCEEEEEECSSSSCCEEE
T ss_pred CCceee----eeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcE-eEEEeccceeEEEEEEcCCCCCEEEE
Confidence 766522 2233457788999999996678999999999999999999876 7888999999999999964 57999
Q ss_pred ecCCCcEEEEEecCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~ 176 (183)
|+.|++|+|||+++++.
T Consensus 288 gs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 288 ISEDCTVAVLDADFSEV 304 (357)
T ss_dssp EETTSCEEEECTTSCEE
T ss_pred EeCCCEEEEEECCCCcE
Confidence 99999999999987643
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=9.9e-26 Score=165.54 Aligned_cols=153 Identities=25% Similarity=0.501 Sum_probs=134.1
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
-.+.+++|+|++.+++.+. +++|++ ...+.+..+.+|...|.+++|+|++. +++|+.|++|++||+++
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~-------~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDF-------QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEET-------TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeC-------CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 3567889999999988876 666743 45567778899999999999998765 89999999999999988
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC---------
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD--------- 153 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--------- 153 (183)
+.. ...+.+|...|.++.++| ++.++++|+.|+.|++||+++.+. ...+.+|...|.+++|+|
T Consensus 224 ~~~------~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 224 GYC------VKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKEC-KAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp CCE------EEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred CcE------EEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCce-eeEecCCCceEEEEEEcCcccccchhh
Confidence 765 667889999999999999 899999999999999999999876 778899999999999997
Q ss_pred ------------CcEEEEecCCCcEEEEEecCCC
Q psy2113 154 ------------YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 154 ------------~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+.++++|+.|+.|++||++++.
T Consensus 296 ~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp CCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred hccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4589999999999999998764
No 17
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.3e-25 Score=161.94 Aligned_cols=158 Identities=23% Similarity=0.339 Sum_probs=132.3
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC-eEEEEeCCCeEEEEEcCCCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~~~d~~v~vwd~~~~~ 84 (183)
..+++|+|++..++++. +.+|.+.... ..........+.+|.+.|.++.|+|++ .|++++.|++|++||+++++
T Consensus 109 v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~ 187 (354)
T 2pbi_B 109 VMACAYAPSGCAIACGGLDNKCSVYPLTFDK-NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ 187 (354)
T ss_dssp CCEEEECTTSSEEEEESTTSEEEEEECCCCT-TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCCEEEEeeCCCCEEEEEEeccc-cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe
Confidence 56789999999998876 5566543211 112234567788999999999999876 59999999999999998876
Q ss_pred CccCceeEEEeecCCcceEEEEEecC-CCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecC
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQ 162 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~ 162 (183)
. ...+.+|...|.+++++|. +++++++|+.||.|++||+++++. +..+.+|...|++++|+|+ .+|++++.
T Consensus 188 ~------~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 188 L------LQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-VQAFETHESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp E------EEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred E------EEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE-EEEecCCCCCeEEEEEeCCCCEEEEEeC
Confidence 5 6678899999999999884 357999999999999999999886 7788999999999999976 89999999
Q ss_pred CCcEEEEEecCCC
Q psy2113 163 DNSVRVFKTKHQP 175 (183)
Q Consensus 163 dg~i~iwd~~~~~ 175 (183)
|++|++||++..+
T Consensus 261 D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 261 DATCRLYDLRADR 273 (354)
T ss_dssp TSCEEEEETTTTE
T ss_pred CCeEEEEECCCCc
Confidence 9999999998754
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=7.8e-26 Score=162.25 Aligned_cols=148 Identities=18% Similarity=0.243 Sum_probs=125.7
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+|++.+++.+. +++|++ .....+..+.+|...|.+++|+|++. |++|+.|+.|++||++.
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~-------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDV-------REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEET-------TTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEEC-------CCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC
Confidence 3567889999999888776 677743 45667788999999999999998865 89999999999999987
Q ss_pred CCCccCceeEEEee--cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEE
Q psy2113 83 GGMKKGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 83 ~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~ 159 (183)
.+. ...+. .+...|.+++|+| ++.++++|+.|+.|++||+.+.+. ...+.+|...|.+++|+|+ .+|++
T Consensus 258 ~~~------~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~-~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 258 DQE------LMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDALKADR-AGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp TEE------EEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSSCEEE
T ss_pred CcE------EEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcccCcE-eeEeecCCCcEEEEEEcCCCCEEEE
Confidence 653 22332 2335799999999 899999999999999999998876 7788999999999999976 89999
Q ss_pred ecCCCcEEEEE
Q psy2113 160 GGQDNSVRVFK 170 (183)
Q Consensus 160 ~~~dg~i~iwd 170 (183)
|+.||.|++||
T Consensus 330 ~s~D~~i~iWd 340 (340)
T 1got_B 330 GSWDSFLKIWN 340 (340)
T ss_dssp EETTSCEEEEC
T ss_pred EcCCccEEecC
Confidence 99999999997
No 19
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.8e-25 Score=159.15 Aligned_cols=153 Identities=24% Similarity=0.393 Sum_probs=130.7
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++.+++.+. +++|+ ....+.+..+.+|...|.+++|+|++. +++|+.|++|++||++..
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWD-------VATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEE-------TTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEE-------CCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 456789999999988776 77784 446677888999999999999998765 899999999999999743
Q ss_pred CCccCceeEEEeecCCcceEEEEEecC-----CCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~-----~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
. ...+.+|...|.+++++|. ++..+++++.|+.|++||+++.+. ...+.+|...|.+++|+|+ .+|
T Consensus 140 ~-------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~h~~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 140 C-------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQI-EADFIGHNSNINTLTASPDGTLI 211 (319)
T ss_dssp E-------EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEE-EEEECCCCSCEEEEEECTTSSEE
T ss_pred e-------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchh-heeecCCCCcEEEEEEcCCCCEE
Confidence 2 5577889999999999983 234899999999999999998765 6778899999999999976 899
Q ss_pred EEecCCCcEEEEEecCCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~~ 176 (183)
++++.||.|++||+++++.
T Consensus 212 ~s~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 212 ASAGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EEEETTCEEEEEETTTTEE
T ss_pred EEEeCCCeEEEEECCCCcE
Confidence 9999999999999987653
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=160.77 Aligned_cols=155 Identities=21% Similarity=0.419 Sum_probs=127.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCcc---ceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKT---PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
.+..++|+|++.+++.+. +++|++. ... ......+|...|.+++|+|++. |++|+.|+.+++||.
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~-------~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~ 90 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTE-------GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKK 90 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEE-------TTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcC-------CCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEc
Confidence 577899999999998876 7777542 221 1122368999999999998875 899999999999998
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc--ceEEeccCCCcEEEEEecCC-cEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
..... .....+.+|...|.+++|+| ++++|++|+.|+.|++||+++... ....+.+|...|.+++|+|+ .+|
T Consensus 91 ~~~~~----~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 165 (345)
T 3fm0_A 91 NQDDF----ECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELL 165 (345)
T ss_dssp CCC-E----EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred cCCCe----EEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence 76532 12556789999999999999 899999999999999999987643 24567889999999999976 899
Q ss_pred EEecCCCcEEEEEecCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~ 175 (183)
++++.|+.|++||++.++
T Consensus 166 ~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 166 ASASYDDTVKLYREEEDD 183 (345)
T ss_dssp EEEETTSCEEEEEEETTE
T ss_pred EEEeCCCcEEEEEecCCC
Confidence 999999999999988653
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=9.1e-25 Score=154.66 Aligned_cols=154 Identities=23% Similarity=0.412 Sum_probs=131.3
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+|++..++++. +++|++ ...+.+..+.+|...|.++.|+|++. +++|+.|+.|++||+++
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDV-------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEET-------TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEEC-------CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 3467889999999988875 677743 45667788999999999999998765 88999999999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
.+. ...+..|...|.+++|+| ++.++++++.||.|++||+++++........+...+..++|+|+ .++++++
T Consensus 139 ~~~------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 139 GKC------LKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp CCE------EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred CEE------EEEecCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 764 567788999999999999 88999999999999999999887633344566778999999976 8999999
Q ss_pred CCCcEEEEEecCCC
Q psy2113 162 QDNSVRVFKTKHQP 175 (183)
Q Consensus 162 ~dg~i~iwd~~~~~ 175 (183)
.||.|++||+++++
T Consensus 212 ~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 212 LDNTLKLWDYSKGK 225 (312)
T ss_dssp TTTEEEEEETTTTE
T ss_pred CCCeEEEEECCCCc
Confidence 99999999998764
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-24 Score=155.91 Aligned_cols=160 Identities=24% Similarity=0.344 Sum_probs=117.8
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEE-ec-cCCCeeEEEEccCCe-EEEEeCCCeEEEEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITL-KG-HKEAISAVQWTAVDE-IITSSWDHTLKIWD 79 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd 79 (183)
.-.+.+++|+|+ +++.+. +++|++.. ........+ .+ |.+.|.+++|+|++. |++|+.|++|++||
T Consensus 14 ~~~v~~~~~s~~--~las~~~D~~i~lw~~~~-----~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~ 86 (330)
T 2hes_X 14 KEKIWSFDFSQG--ILATGSTDRKIKLVSVKY-----DDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWA 86 (330)
T ss_dssp SSCEEEEEEETT--EEEEEESSSCEEEEECSS-----SCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCceeeeccCCC--EEEEEcCCCEEEEEEecC-----CCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 345677888887 555544 77776532 112334445 34 999999999998876 88999999999999
Q ss_pred cCCCCCc-cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC---cceEEeccCCCcEEEEEecCC-
Q psy2113 80 AELGGMK-KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK---VPLFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~- 154 (183)
++..... ....+...+.+|...|.+++|+| ++++|++|+.|+.|++||++... ..+..+.+|...|.+++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 8643211 12233556789999999999999 88999999999999999995432 225678899999999999976
Q ss_pred cEEEEecCCCcEEEEEecCC
Q psy2113 155 RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~ 174 (183)
.+|++++.|++|++||++.+
T Consensus 166 ~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 166 ALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp SEEEEEETTSCEEEEEEETT
T ss_pred CEEEEEcCCCeEEEEECCCC
Confidence 89999999999999998764
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=1.1e-24 Score=159.05 Aligned_cols=152 Identities=26% Similarity=0.456 Sum_probs=125.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++..++++. +++|+ ....+.+..+.+|...|.+++|+|++. |++++.|++|++||++++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd-------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWD-------IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEE-------CCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC
Confidence 367899999999998876 66674 345667788999999999999998765 899999999999999876
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe-------ccCCCcEEEEEecCC-c
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM-------LGHEDKVMCVNWSDY-R 155 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~-~ 155 (183)
+. ...+ .+...+.+++|+|.++.++++|+.|+.|++||++++.. +..+ .+|...|.+++|+|+ .
T Consensus 198 ~~------~~~~-~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~-~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 198 QC------SLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp EE------EEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTTSS
T ss_pred ee------EEEE-EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-EEeecccccCCCCCCCCEEEEEECCCCC
Confidence 54 3333 36678999999997788999999999999999998765 4444 578999999999965 8
Q ss_pred EEEEecCCCcEEEEEecCCC
Q psy2113 156 YIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~ 175 (183)
+|++++.||.|++||+++..
T Consensus 270 ~l~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 270 SVVSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp EEEEEETTSEEEEEEC----
T ss_pred EEEEEeCCCEEEEEECCCCC
Confidence 99999999999999998754
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=3.8e-26 Score=166.18 Aligned_cols=160 Identities=26% Similarity=0.377 Sum_probs=130.6
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEEEEcCCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELG 83 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~vwd~~~~ 83 (183)
+.+++|+|++..++.+. +++|++...............+.+|.+.|.++.|.|++ .|++|+.|++|++||++++
T Consensus 111 v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~ 190 (380)
T 3iz6_a 111 VMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTG 190 (380)
T ss_dssp CCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTC
T ss_pred EEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCC
Confidence 45678999999998876 66676543322222334455678999999999999753 4999999999999999887
Q ss_pred CCccCceeEEEe-----ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE
Q psy2113 84 GMKKGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 84 ~~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
+. ...+ .+|...|.+++++|.+++++++|+.|+.|++||++.....+..+.+|...|++++|+|+ .+|
T Consensus 191 ~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 264 (380)
T 3iz6_a 191 QR------ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRF 264 (380)
T ss_dssp CE------EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEE
T ss_pred cE------EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeE
Confidence 64 3333 57889999999988678899999999999999998654457889999999999999976 899
Q ss_pred EEecCCCcEEEEEecCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~ 175 (183)
++++.||+|++||+++++
T Consensus 265 ~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 265 GTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp EEECSSSCEEEEETTTTE
T ss_pred EEEcCCCeEEEEECCCCc
Confidence 999999999999998764
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=3.7e-25 Score=169.84 Aligned_cols=151 Identities=23% Similarity=0.321 Sum_probs=127.3
Q ss_pred ceeEEEEEeecCcEEEEEE--------eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEE
Q psy2113 8 ILTLGVIFMTVGALLTLTN--------IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKI 77 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~v 77 (183)
..+.+++|+|++..+++.. +.+|+ .......+.+|.+.|++++|+|++ .|++|+.|++|++
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd---------~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~l 174 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFD---------TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 174 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETT---------TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEee---------CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEE
Confidence 3567899999999988654 34443 233445678999999999999986 4999999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec-------cCCCcEEEEE
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-------GHEDKVMCVN 150 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-------~~~~~v~~~~ 150 (183)
||..+.+. ...+.+|...|.+++|+| ++++|++++.|+.|++||+++++. ...+. +|...|.+++
T Consensus 175 wd~~~~~~------~~~l~~H~~~V~~v~fsp-dg~~las~s~D~~i~lwd~~~g~~-~~~~~~~~~~~~~h~~~V~~v~ 246 (611)
T 1nr0_A 175 FEGPPFKF------KSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLT 246 (611)
T ss_dssp EETTTBEE------EEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEE
T ss_pred EECCCCeE------eeeeccccCceEEEEECC-CCCEEEEEECCCcEEEEECCCCcE-eeeeccccccccccCCCEEEEE
Confidence 99876543 567889999999999999 899999999999999999998875 45553 7999999999
Q ss_pred ecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 151 WSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 151 ~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
|+|+ .+|++++.|++|++||+++++
T Consensus 247 ~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 247 WSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 9976 899999999999999998764
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=8.6e-25 Score=155.58 Aligned_cols=158 Identities=25% Similarity=0.369 Sum_probs=130.4
Q ss_pred eceeEEEEEeecC-cEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 7 GILTLGVIFMTVG-ALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
.-.+.+++|+|++ .+++.+. +++|++... ......++..+.+|...|.+++|+|++. +++|+.|++|++||+
T Consensus 17 ~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~--~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~ 94 (319)
T 3frx_A 17 NGWVTSLATSAGQPNLLLSASRDKTLISWKLTGD--DQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDV 94 (319)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEE--TTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cceEEEEEccCCCccEEEEecCCccEEEecCCCC--CccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 3456788999965 6666654 777865321 1122356778999999999999998876 889999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC------
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY------ 154 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~------ 154 (183)
++++. ...+.+|...|.+++|+| ++.++++|+.|+.|++||++.. . +..+.+|...|.++.|.|.
T Consensus 95 ~~~~~------~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~~-~-~~~~~~h~~~v~~~~~~~~~~~~~~ 165 (319)
T 3frx_A 95 ATGET------YQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKGQ-C-LATLLGHNDWVSQVRVVPNEKADDD 165 (319)
T ss_dssp TTTEE------EEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTSC-E-EEEECCCSSCEEEEEECCC------
T ss_pred CCCCe------eEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-e-EEEEeccCCcEEEEEEccCCCCCCC
Confidence 88764 667889999999999999 8899999999999999999754 3 6788899999999999863
Q ss_pred -cEEEEecCCCcEEEEEecCCC
Q psy2113 155 -RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 155 -~~l~~~~~dg~i~iwd~~~~~ 175 (183)
..+++++.|+.|++||+++.+
T Consensus 166 ~~~l~s~~~d~~i~~wd~~~~~ 187 (319)
T 3frx_A 166 SVTIISAGNDKMVKAWNLNQFQ 187 (319)
T ss_dssp CCEEEEEETTSCEEEEETTTTE
T ss_pred ccEEEEEeCCCEEEEEECCcch
Confidence 379999999999999998754
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=1.6e-24 Score=166.40 Aligned_cols=154 Identities=18% Similarity=0.257 Sum_probs=126.6
Q ss_pred ceeEEEEEeecCcE-EEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMTVGAL-LTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
-.+.+++|+|++.. ++.+. +++|+. ...+....+.+|.+.|.+++|+|++. |++++.|++|++||+.
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~-------~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~ 220 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEG-------PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV 220 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEET-------TTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEEC-------CCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECC
Confidence 35678999999863 55544 666743 34566778999999999999999876 8899999999999998
Q ss_pred CCCCccCceeEEEee-------cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc-------------------
Q psy2113 82 LGGMKKGAIVKSTFS-------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP------------------- 135 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~------------------- 135 (183)
+++. ...+. +|...|.+++|+| ++.+|++++.|++|++||+++++..
T Consensus 221 ~g~~------~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (611)
T 1nr0_A 221 DGTK------TGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 293 (611)
T ss_dssp TCCE------EEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC
T ss_pred CCcE------eeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc
Confidence 7664 33442 7999999999999 8999999999999999999876431
Q ss_pred -----------------------eEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 136 -----------------------LFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 136 -----------------------~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...+.+|...|++++|+|+ .+|++++.|+.|++||+++++
T Consensus 294 ~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 294 KQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI 357 (611)
T ss_dssp SSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCc
Confidence 1234579999999999975 899999999999999998764
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=3.4e-24 Score=154.56 Aligned_cols=161 Identities=16% Similarity=0.242 Sum_probs=134.4
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.-.+.+++|+|++..++.+. +++|+. ...+....+..|...|.+++|+|++. +++++.|+.+++|++.
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~-------~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDS-------FTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEET-------TTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECC
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEEC-------CCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEe
Confidence 34578899999999988876 777743 34556677888999999999999876 8899999999999987
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC---CcEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD---YRYIM 158 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~ 158 (183)
.............+..|...|.+++|+| ++..+++++.|+.|++||+++++. +..+.+|...|.+++|++ +.+|+
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQL-LQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeE-EEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 5433222223456778999999999999 888999999999999999999876 788899999999999985 37999
Q ss_pred EecCCCcEEEEEecCCCC
Q psy2113 159 SGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~~ 176 (183)
+|+.||.|++||+++++.
T Consensus 215 sgs~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQC 232 (354)
T ss_dssp EEETTSCEEEEETTTCCE
T ss_pred EEeCCCeEEEEECCCCcE
Confidence 999999999999988653
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=8.5e-25 Score=159.06 Aligned_cols=155 Identities=17% Similarity=0.306 Sum_probs=125.1
Q ss_pred ceeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
..+.+++|++ ++.+++.+. +++|++. .....+..+.+|.+.|++++|+|++. |++|+.|++|++||++
T Consensus 206 ~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 206 ADVLSLSINSLNANMFISGSCDTTVRLWDLR------ITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SCEEEEEECSSSCCEEEEEETTSCEEEEETT------TTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred cCeEEEEeecCCCCEEEEEECCCeEEEEECC------CCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 3567778876 677777765 6777542 23456778899999999999999875 8999999999999998
Q ss_pred CCCCccCceeEEEeecC-------CcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe----ccCCCcEEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSH-------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM----LGHEDKVMCVN 150 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~----~~~~~~v~~~~ 150 (183)
++.. ...+..+ ...|.+++|+| ++.++++|+.||.|++||+.+++. ...+ .+|...|++++
T Consensus 280 ~~~~------~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 280 TGHQ------LQVYNREPDRNDNELPIVTSVAFSI-SGRLLFAGYSNGDCYVWDTLLAEM-VLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp TTEE------EEEECCCCSSSCCSSCSCSEEEECS-SSSEEEEECTTSCEEEEETTTCCE-EEEECCSCSSCCCCCCEEE
T ss_pred CCcE------EEEecccccccccccCceEEEEECC-CCCEEEEEECCCCEEEEECCCCce-EEEEecccCCCCCceEEEE
Confidence 7654 3333322 23489999999 899999999999999999988775 4444 68999999999
Q ss_pred ecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 151 WSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 151 ~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|+|+ .+|++|+.||.|++|++...++
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 9966 8999999999999999987654
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=3.2e-24 Score=151.17 Aligned_cols=160 Identities=21% Similarity=0.324 Sum_probs=126.8
Q ss_pred eceeEEEEEeec--CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccC--C-eEEEEeCCCeEEE
Q psy2113 7 GILTLGVIFMTV--GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKI 77 (183)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~~~d~~v~v 77 (183)
.-.+.+++|++. +..++.+. +++|++.. .....+..+.+|...|.+++|+|+ + .|++++.|+.|++
T Consensus 53 ~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~-----~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 53 EGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN-----GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS-----SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred cCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC-----CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 345678899864 77777765 77786532 122355678889999999999975 4 5899999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCC------------CCEEEEEeCCCeEEEEeCCCCCc---ceEEeccC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID------------PQLFVSASFDNSVKLWDLRSPKV---PLFDMLGH 142 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~------------~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~ 142 (183)
||++...... ...+.+|...|.+++|+|+. +++|++|+.|+.|++||+++... ....+.+|
T Consensus 128 wd~~~~~~~~----~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H 203 (297)
T 2pm7_B 128 VEFKENGTTS----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (297)
T ss_dssp EEBCSSSCBC----CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEecCCCcee----eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCC
Confidence 9998653211 23567899999999999932 46999999999999999987652 24577899
Q ss_pred CCcEEEEEecCC----cEEEEecCCCcEEEEEecCCC
Q psy2113 143 EDKVMCVNWSDY----RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 143 ~~~v~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...|.+++|+|+ .+|++++.|++|++||++...
T Consensus 204 ~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 204 SDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 999999999975 689999999999999998743
No 31
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=5.1e-24 Score=152.95 Aligned_cols=153 Identities=19% Similarity=0.392 Sum_probs=123.8
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++.+++.+. +++|++ ...+.+..+.+|.+.|.+++|+|++. |++++.|+.|++||+...
T Consensus 78 ~V~~~~~~~~~~~l~s~s~D~~v~lwd~-------~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 78 FVSDLALSQENCFAISSSWDKTLRLWDL-------RTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp CEEEEEECSSTTEEEEEETTSEEEEEET-------TSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEEC-------CCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 467889999999988765 777744 45667788999999999999998865 899999999999998732
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCC----------CEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDP----------QLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD 153 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~----------~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 153 (183)
... .......|...|.+++|+| .+ .++++++.|+.|++||.+. . ....+.+|...|.+++|+|
T Consensus 151 ~~~----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~-~~~~~~~h~~~v~~~~~s~ 223 (343)
T 2xzm_R 151 CKF----SSAEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q-IRYTFKAHESNVNHLSISP 223 (343)
T ss_dssp EEE----ECCTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E-EEEEEECCSSCEEEEEECT
T ss_pred cee----eeecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEcCCC-c-eeEEEcCccccceEEEECC
Confidence 210 0111236888999999999 54 6899999999999999543 3 2667889999999999997
Q ss_pred C-cEEEEecCCCcEEEEEecCCC
Q psy2113 154 Y-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 154 ~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+ .+|++|+.||.|++||++...
T Consensus 224 ~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 224 NGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp TSSEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEcCCCeEEEEECCCCc
Confidence 6 899999999999999996543
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.7e-24 Score=164.54 Aligned_cols=145 Identities=29% Similarity=0.469 Sum_probs=124.3
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
-...+++|+|++..++.+. +.+|+. ..+.+..+.+|...|.+++|+|++. |++++.|+.|++||..
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~--------~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~- 497 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNR--------NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN- 497 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEET--------TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEEC--------CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-
Confidence 3456789999999988765 555642 4466788899999999999999876 8899999999999964
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
++. ...+.+|...|++++|+| ++++|++++.||.|++||. +++. +..+.+|.+.|++++|+|+ .+|++++
T Consensus 498 ~~~------~~~~~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~-~~~~~~h~~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 498 GQL------LQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQL-LQTLTGHSSSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp SCE------EEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCE-EEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred CCE------EEEEeCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCE-EEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 332 567889999999999999 8899999999999999996 4444 7888999999999999966 8999999
Q ss_pred CCCcEEEEE
Q psy2113 162 QDNSVRVFK 170 (183)
Q Consensus 162 ~dg~i~iwd 170 (183)
.|+.|++||
T Consensus 569 ~D~~i~~Wd 577 (577)
T 2ymu_A 569 SDKTVKLWN 577 (577)
T ss_dssp TTSCEEEEC
T ss_pred CCCEEEEeC
Confidence 999999997
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=6.4e-24 Score=155.07 Aligned_cols=158 Identities=24% Similarity=0.405 Sum_probs=123.8
Q ss_pred eeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEE-------eccCCCeeEEEEccCCe-EEEEeCCCeE
Q psy2113 9 LTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITL-------KGHKEAISAVQWTAVDE-IITSSWDHTL 75 (183)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~-l~s~~~d~~v 75 (183)
...+++|+| ++.+++++. +++|++. ....+..+ .+|...|.+++|+|++. |++|+.|+.|
T Consensus 208 ~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~-------~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 208 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSE-------TGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp CEEEEEECSTTCCEEEEEETTSCEEEEETT-------TCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEECC-------CCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 356788999 888888776 6667543 23333333 67999999999998876 8999999999
Q ss_pred EEEEcCCCCCcc------CceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEE
Q psy2113 76 KIWDAELGGMKK------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV 149 (183)
Q Consensus 76 ~vwd~~~~~~~~------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 149 (183)
++||++...... .......+.+|...|.+++|+| ++.++++|+.|+.|++||.++++. +..+.+|...|.++
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~-~~~l~~h~~~v~~v 358 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNP-LLMLQGHRNSVISV 358 (393)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEE
T ss_pred EEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeE-EEEECCCCCCEEEE
Confidence 999997643211 1123446778999999999999 888999999999999999999876 77889999999999
Q ss_pred EecC-------CcEEEEecCCCcEEEEEecCCC
Q psy2113 150 NWSD-------YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 150 ~~~~-------~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+|++ +.+|++|+.||+|++|+++...
T Consensus 359 ~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 359 AVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp EECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred EecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 9985 3789999999999999987643
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=6e-24 Score=152.55 Aligned_cols=155 Identities=28% Similarity=0.430 Sum_probs=125.0
Q ss_pred eeEEEEE-----ee-cCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEE
Q psy2113 9 LTLGVIF-----MT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKI 77 (183)
Q Consensus 9 ~~~~~~~-----~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~v 77 (183)
.+.+++| ++ ++.+++.+. +++|++...........+...+.+|...|.+++|+|++. +++++.|++|++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~l 102 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRL 102 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEE
Confidence 4567777 65 888888776 778876432222223456678899999999999998765 789999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe---ccCCCcEEEEEecCC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM---LGHEDKVMCVNWSDY 154 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~~ 154 (183)
||+++++. ...+.+|...|.+++|+| +++++++++.|+.|++||+.... .... ..|...|.+++|+|.
T Consensus 103 wd~~~~~~------~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~~~~v~~~~~~~~ 173 (343)
T 2xzm_R 103 WDLRTGTT------YKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGEC--KFSSAEKENHSDWVSCVRYSPI 173 (343)
T ss_dssp EETTSSCE------EEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCE--EEECCTTTSCSSCEEEEEECCC
T ss_pred EECCCCcE------EEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCc--eeeeecccCCCceeeeeeeccc
Confidence 99988764 667889999999999999 88999999999999999998432 2222 378899999999964
Q ss_pred -----------cEEEEecCCCcEEEEEec
Q psy2113 155 -----------RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 155 -----------~~l~~~~~dg~i~iwd~~ 172 (183)
.++++++.||.|++||.+
T Consensus 174 ~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 174 MKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp CCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred cccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 589999999999999943
No 35
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=1.6e-23 Score=149.20 Aligned_cols=166 Identities=20% Similarity=0.333 Sum_probs=130.7
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc---CCeEEEEeCCCeEEEEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKIWD 79 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~~~d~~v~vwd 79 (183)
.-.+.+++|+|++.+++++. +++|++... ....+....+.+|...|.+++|+| +..|++++.|+.|++||
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKD---TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSS---SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCC---CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 34577889999999988876 777754321 112245677889999999999997 34599999999999999
Q ss_pred cCCCCCcc---CceeEEEeecCCcceEEEEEecCC--CCEEEEEeCCCeEEEEeCCCCCc--------------------
Q psy2113 80 AELGGMKK---GAIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLRSPKV-------------------- 134 (183)
Q Consensus 80 ~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~vwd~~~~~~-------------------- 134 (183)
++...... .......+..|...|.+++|+| + +.++++++.||.|++||+++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANH 166 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSC
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCc
Confidence 98764321 1133566778999999999999 7 88999999999999999876542
Q ss_pred ---------------------------------------ceEEeccCCCcEEEEEecCC-----cEEEEecCCCcEEEEE
Q psy2113 135 ---------------------------------------PLFDMLGHEDKVMCVNWSDY-----RYIMSGGQDNSVRVFK 170 (183)
Q Consensus 135 ---------------------------------------~~~~~~~~~~~v~~~~~~~~-----~~l~~~~~dg~i~iwd 170 (183)
....+.+|...|++++|+|+ .+|++++.||.|++||
T Consensus 167 ~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd 246 (351)
T 3f3f_A 167 LQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFK 246 (351)
T ss_dssp SCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEE
T ss_pred ccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEe
Confidence 13445678999999999976 5899999999999999
Q ss_pred ecCCCC
Q psy2113 171 TKHQPK 176 (183)
Q Consensus 171 ~~~~~~ 176 (183)
++....
T Consensus 247 ~~~~~~ 252 (351)
T 3f3f_A 247 ITEKLS 252 (351)
T ss_dssp EEECC-
T ss_pred CCCCcC
Confidence 987643
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=3.6e-25 Score=157.34 Aligned_cols=161 Identities=20% Similarity=0.329 Sum_probs=126.6
Q ss_pred ceeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc---CCeEEEEeCCCeEEE
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKI 77 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~~l~s~~~d~~v~v 77 (183)
...-.+.+++|+|++..++.+. +++|++.. .....+..+.+|.+.|.+++|++ +..|++|+.|++|++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~-----~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRN-----GGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEET-----TEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecC-----CCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 3445678899999999998876 77775421 11234678899999999999974 345999999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCC-CCEEEEEeCCCeEEEEeCCCCCc--ceEEeccCCCcEEEEEecCC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY 154 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~ 154 (183)
||++++... ....+.+|...|.+++|+|+. +.++++|+.|+.|++||++.... ....+.+|...|.+++|+|+
T Consensus 86 Wd~~~~~~~----~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 86 WREENGTWE----KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp ECCSSSCCC----EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EECCCCcce----EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 999865421 244677899999999999942 77999999999999999987632 13455789999999999964
Q ss_pred ------------------cEEEEecCCCcEEEEEecCC
Q psy2113 155 ------------------RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 155 ------------------~~l~~~~~dg~i~iwd~~~~ 174 (183)
.+|++|+.|+.|++||++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 58999999999999999754
No 37
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=6.9e-24 Score=151.22 Aligned_cols=168 Identities=23% Similarity=0.341 Sum_probs=122.7
Q ss_pred eeceeEEEEEeec-CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEE
Q psy2113 6 FGILTLGVIFMTV-GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 79 (183)
Q Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd 79 (183)
..-.+.+++|+|+ +.+++.+. +++|++.... .....+...+.+|...|.+++|+|++. |++++.|+.+++|+
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~--~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDE--TNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSS--SCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC--cccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 3446788999998 56777654 7888764321 223445678899999999999998876 78888888888888
Q ss_pred cCCCCCc-------------------------------------------------------------------------
Q psy2113 80 AELGGMK------------------------------------------------------------------------- 86 (183)
Q Consensus 80 ~~~~~~~------------------------------------------------------------------------- 86 (183)
.......
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred ecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC
Confidence 7543211
Q ss_pred --------cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc-----------------------
Q psy2113 87 --------KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP----------------------- 135 (183)
Q Consensus 87 --------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~----------------------- 135 (183)
........+.+|...|.+++|+| ++++|++|+.|+.|++||+++.+..
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 273 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCA 273 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEE
T ss_pred CEEEEEECCCCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeec
Confidence 11223345567889999999999 8899999999999999999865430
Q ss_pred ----------------e---------EEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 136 ----------------L---------FDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 136 ----------------~---------~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
. ....+|...|++++|+|+ .+|++|+.||.|++||++++.+
T Consensus 274 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 274 ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 0 011256778899999965 8999999999999999998753
No 38
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=1.2e-24 Score=160.79 Aligned_cols=158 Identities=15% Similarity=0.234 Sum_probs=122.4
Q ss_pred ceeEEEEEeec-CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc-C-CeEEEEeCCCeEEEEEc
Q psy2113 8 ILTLGVIFMTV-GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-V-DEIITSSWDHTLKIWDA 80 (183)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~~~d~~v~vwd~ 80 (183)
-.+.+++|+|. +.+++++. +.+|++.. ........+.+|.+.|++|+|+| + ..|++|+.|++|++||+
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~-----~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI-----KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSC-----CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC-----CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 34788999995 56777765 78886532 23334455678999999999997 3 45999999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIM 158 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~ 158 (183)
+..... .......+...+.+++|+| ++.++++|+.||.|++||++... +..+.+|...|++++|+|. .+++
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~--~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 195 KGNILR----VFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKE--LWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp TSCEEE----EEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCB--CCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred cCCcee----EEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcce--eEEEecccceEEeeeecCCCceEEE
Confidence 764321 0111122345678999999 88999999999999999997643 5678899999999999965 5888
Q ss_pred EecCCCcEEEEEecCCCCC
Q psy2113 159 SGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~~~ 177 (183)
+++.|+.|++||+++.+..
T Consensus 268 s~s~d~~v~iwd~~~~~~~ 286 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGK 286 (435)
T ss_dssp EEETTSBCCEEETTTCCSS
T ss_pred EecCcceeeEEeccccccc
Confidence 9999999999999886644
No 39
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=8.2e-24 Score=154.68 Aligned_cols=163 Identities=21% Similarity=0.390 Sum_probs=133.6
Q ss_pred eeceeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEEE
Q psy2113 6 FGILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIW 78 (183)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~vw 78 (183)
....+.+++|+| ++.+++++. +.+|++..........+++..+.+|...|.+++|+|++ .|++++.|+.|++|
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 344678899999 888888876 77887654322222226678899999999999999885 58999999999999
Q ss_pred EcCCCCCccCceeEEEe--ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe-ccCCCc-EEEEEecCC
Q psy2113 79 DAELGGMKKGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM-LGHEDK-VMCVNWSDY 154 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~-v~~~~~~~~ 154 (183)
|+++++. ...+ ..|...|.+++|+| ++.++++++.|+.|++||+++++. +..+ ..|... +.++.|+++
T Consensus 160 d~~~~~~------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (402)
T 2aq5_A 160 DVGTGAA------VLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTV-VAEKDRPHEGTRPVHAVFVSE 231 (402)
T ss_dssp ETTTTEE------EEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEE-EEEEECSSCSSSCCEEEECST
T ss_pred ECCCCCc------cEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCce-eeeeccCCCCCcceEEEEcCC
Confidence 9987664 5566 67999999999999 889999999999999999999876 5555 678765 899999976
Q ss_pred -cEEEEe---cCCCcEEEEEecCCCC
Q psy2113 155 -RYIMSG---GQDNSVRVFKTKHQPK 176 (183)
Q Consensus 155 -~~l~~~---~~dg~i~iwd~~~~~~ 176 (183)
.++++| +.|+.|++||+++.+.
T Consensus 232 ~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 232 GKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CcEEEEeccCCCCceEEEEcCccccC
Confidence 777787 7999999999988765
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=8e-25 Score=158.46 Aligned_cols=156 Identities=15% Similarity=0.224 Sum_probs=120.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCc--cceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQK--TPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.+.+++|+|++.+++++. +.+|++ ... +.+..+.+|.+.|.+++|+|++. |++++.|+.|++||+.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~-------~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQ-------DGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEE-------ETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEc-------cCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 456788999999998874 555643 233 56677889999999999998865 9999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc--ceEEecc-CCCcEEEEEecCC-cEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLG-HEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~-~~~~v~~~~~~~~-~~l 157 (183)
+... ......+..|...|.+++|+| +++++++++.|+.|++||+++... ....+.. |...|.+++|+|+ .+|
T Consensus 86 ~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 86 PDGT---WKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ---C---CCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred CCCc---eeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 7651 111456778999999999999 889999999999999999998752 2556666 9999999999976 899
Q ss_pred EEecCCCcEEEEEecCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~ 175 (183)
++++.||.|++||++...
T Consensus 162 ~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp EEEESSSCEEEEEECCSS
T ss_pred EEEeCCCEEEEEEEEecc
Confidence 999999999999997443
No 41
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=1.4e-23 Score=149.45 Aligned_cols=169 Identities=18% Similarity=0.288 Sum_probs=130.6
Q ss_pred eceeEEEEEee--cCcEEEEEE----eccCCCCccccc--ccCccceEEEeccCCCeeEEEEccC--Ce-EEEEeCCCeE
Q psy2113 7 GILTLGVIFMT--VGALLTLTN----IEVTSLPSFFQL--ILQKTPLITLKGHKEAISAVQWTAV--DE-IITSSWDHTL 75 (183)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~h~~~v~~~~~~~~--~~-l~s~~~d~~v 75 (183)
...+.+++|+| ++..++++. +.+|++...... ....+.+..+..|.+.|.+++|+|+ +. +++++.|+.|
T Consensus 57 ~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 57 DSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE
Confidence 34577889999 588888765 667765432110 1112557788899999999999986 54 8999999999
Q ss_pred EEEEcCCCCCccC------------------------------------------------------ceeEEEeecCCcc
Q psy2113 76 KIWDAELGGMKKG------------------------------------------------------AIVKSTFSSHKEW 101 (183)
Q Consensus 76 ~vwd~~~~~~~~~------------------------------------------------------~~~~~~~~~~~~~ 101 (183)
++||+++.+.... ......+.+|...
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 9999876543211 1124456679999
Q ss_pred eEEEEEecCCC----CEEEEEeCCCeEEEEeCCCCC--------------------------------------------
Q psy2113 102 VQSVRWSPIDP----QLFVSASFDNSVKLWDLRSPK-------------------------------------------- 133 (183)
Q Consensus 102 v~~~~~~p~~~----~~l~~~~~dg~i~vwd~~~~~-------------------------------------------- 133 (183)
|.+++|+| ++ .++++|+.||.|++||+++..
T Consensus 217 i~~~~~~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (351)
T 3f3f_A 217 IRSISWAP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQ 295 (351)
T ss_dssp EEEEEECC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEE
T ss_pred eeEEEECC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeeccccc
Confidence 99999999 65 799999999999999998742
Q ss_pred -cceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 134 -VPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 134 -~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
..+..+.+|...|++++|+|+ .+|++++.||.|++||+.+++.
T Consensus 296 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 296 VELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred ccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 235567789999999999965 8999999999999999998654
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.4e-23 Score=151.43 Aligned_cols=161 Identities=23% Similarity=0.380 Sum_probs=132.7
Q ss_pred eeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccC---CeEEEEeCCCeEEEE
Q psy2113 6 FGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIW 78 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~l~s~~~d~~v~vw 78 (183)
..-.+.+++|+|++..++++. +.+|++. ....+.+..+.+|.+.|.+++|+++ ..|++++.|+.|++|
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~-----~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVE-----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEE-----TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecC-----CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 344677889999999998875 6666542 2245667788999999999999844 459999999999999
Q ss_pred EcCCCCCccCceeEEEeecCCcceEEEEEecCC--CCEEEEEeCCCeEEEEeCCCCCc-ceEEeccCCCcEEEEEecC--
Q psy2113 79 DAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLRSPKV-PLFDMLGHEDKVMCVNWSD-- 153 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~-- 153 (183)
|+.+++.. ....+..|...|.+++|+| + +.++++++.|+.|++||+++... ....+..|...|.+++|+|
T Consensus 85 d~~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 85 KEENGRWS----QIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp EEETTEEE----EEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EcCCCcee----EeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99876421 2556778999999999999 6 88999999999999999998742 2556778999999999997
Q ss_pred ------------CcEEEEecCCCcEEEEEecCCCC
Q psy2113 154 ------------YRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 154 ------------~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+.++++++.||.|++||++....
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 58999999999999999987653
No 43
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.92 E-value=1.2e-23 Score=163.49 Aligned_cols=157 Identities=25% Similarity=0.410 Sum_probs=129.2
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++.+++.+. +++|++ .....+..+.+|.+.|.+++|+|++. |++|+.|++|++||....
T Consensus 432 ~v~~v~~s~~g~~l~sgs~Dg~v~vwd~-------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALSGSWDGELRLWDL-------AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEET-------TTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEEC-------CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 467889999999988876 777854 45667788899999999999998865 999999999999997643
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCC-CCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
... .......+|...|.+++|+|+. ...+++++.|+.|++||+++.+. ...+.+|...|++++|+|+ .+|++++
T Consensus 505 ~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~-~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 505 CKY---TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL-RSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp EEE---EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cce---eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE-EEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 210 0011124688899999999943 25899999999999999998876 7788999999999999976 8999999
Q ss_pred CCCcEEEEEecCCCC
Q psy2113 162 QDNSVRVFKTKHQPK 176 (183)
Q Consensus 162 ~dg~i~iwd~~~~~~ 176 (183)
.||.|++||+++++.
T Consensus 581 ~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKK 595 (694)
T ss_dssp TTSBCEEEETTTTEE
T ss_pred CCCeEEEEECCCCce
Confidence 999999999987754
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=5.4e-24 Score=156.03 Aligned_cols=157 Identities=13% Similarity=0.223 Sum_probs=126.3
Q ss_pred eeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 6 FGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
..-.+.+++|+|++..++++. +.+|++ ...+.+..+.+|.+.|.+++|+|++. |++++.|+.|++||+
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSV-------KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEET-------TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeC-------CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 344577899999999888765 667744 45567788899999999999998765 899999999999999
Q ss_pred CCCCCccCceeEEEeec---CCcceEE---------------------EEEecCCCCEEEEEeCCCeEEEEeCCCCCcce
Q psy2113 81 ELGGMKKGAIVKSTFSS---HKEWVQS---------------------VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL 136 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~---~~~~v~~---------------------~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~ 136 (183)
++++. ...+.. +...+.+ ++|+| ++.++++|+.||.|++||+++++...
T Consensus 211 ~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 211 GTGTT------IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNVFSKEQTI 283 (420)
T ss_dssp TTTEE------EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCce------eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEECCCCceeE
Confidence 87654 334432 3344444 45567 78899999999999999999988644
Q ss_pred EEeccCCCcEEEEEecCC-c-EEEEecCCCcEEEEEecCCCC
Q psy2113 137 FDMLGHEDKVMCVNWSDY-R-YIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 137 ~~~~~~~~~v~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.....|...|.+++|+|+ . +|++++.||.|++||+++++.
T Consensus 284 ~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 284 QLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp EECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred EcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 555668899999999976 5 999999999999999998765
No 45
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.92 E-value=5.2e-23 Score=145.42 Aligned_cols=156 Identities=21% Similarity=0.307 Sum_probs=115.3
Q ss_pred EEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEE--eccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCC
Q psy2113 11 LGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITL--KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~ 84 (183)
..++|++++ +++++. +++|+ ..+++.+..+ .+|...|++++|+|++. +++|+.|++|++||+++++
T Consensus 29 ~~l~WS~~~-~lAvg~D~tV~iWd-------~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDNSVYLWS-------ASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEE-------TTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEECCCC-EEEEEeCCEEEEEE-------CCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 347899887 666654 77774 3455555555 46788899999998876 8999999999999998764
Q ss_pred Cc-----------------------------------cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 85 MK-----------------------------------KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 85 ~~-----------------------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
.. ........+.+|...+..+.+++ .+.++++++.|+.|++||+
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEES
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEEC
Confidence 32 01122334556777777777777 6777777777888888877
Q ss_pred CCCCc---------------------------------------------------------------------------
Q psy2113 130 RSPKV--------------------------------------------------------------------------- 134 (183)
Q Consensus 130 ~~~~~--------------------------------------------------------------------------- 134 (183)
++++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 259 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEE
Confidence 65431
Q ss_pred ----------------ceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 135 ----------------PLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 135 ----------------~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
++..+.+|.+.|++++|+|+ .+|++|+.||+|++||+.+.+
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 35566789999999999965 899999999999999987654
No 46
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=1.7e-23 Score=152.28 Aligned_cols=153 Identities=18% Similarity=0.348 Sum_probs=128.0
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEec---c---CCCeeEEEEccCCe-EEEEeCC---
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKG---H---KEAISAVQWTAVDE-IITSSWD--- 72 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---h---~~~v~~~~~~~~~~-l~s~~~d--- 72 (183)
...+.+++|+|++ .++++. +.+|++ ...+.+..+.. | ...|.+++|+|++. |++++.|
T Consensus 186 ~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~-------~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~ 257 (397)
T 1sq9_A 186 SQFATSVDISERG-LIATGFNNGTVQISEL-------STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 257 (397)
T ss_dssp CCCCCEEEECTTS-EEEEECTTSEEEEEET-------TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTE
T ss_pred CCCceEEEECCCc-eEEEEeCCCcEEEEEC-------CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCC
Confidence 4456788999999 777754 666643 45667788888 9 99999999998765 8889999
Q ss_pred CeEEEEEcCCCCCccCceeEEEeec-------------CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSS-------------HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM 139 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 139 (183)
+.|++||+++.+. ...+.. |...|.+++|+| ++.+|++++.||.|++||+++++. +..+
T Consensus 258 g~i~i~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~-~~~~ 329 (397)
T 1sq9_A 258 GCITLYETEFGER------IGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKER-ITTL 329 (397)
T ss_dssp EEEEEEETTTCCE------EEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEE-EEEE
T ss_pred ceEEEEECCCCcc------cceeccCcccccccccccccCCcEEEEEECC-CCCEEEEEeCCCeEEEEEcCCCce-eEEE
Confidence 9999999987664 556677 999999999999 889999999999999999998876 6777
Q ss_pred c------cC---------------CCcEEEEEecCC-----------cEEEEecCCCcEEEEEecCCC
Q psy2113 140 L------GH---------------EDKVMCVNWSDY-----------RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 140 ~------~~---------------~~~v~~~~~~~~-----------~~l~~~~~dg~i~iwd~~~~~ 175 (183)
. +| ...|++++|+|+ .+|++++.||.|++||+++++
T Consensus 330 ~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 330 NMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp ECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 7 77 899999999976 599999999999999998763
No 47
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7.1e-23 Score=144.34 Aligned_cols=154 Identities=18% Similarity=0.272 Sum_probs=128.5
Q ss_pred ceeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEEec-cCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKG-HKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
....+++|.| ++..++++. +.+|+ ..+....+.. |...|.+++|+|++.+++++.|+.|++||++
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d---------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQ---------NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMH 213 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEE---------TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETT
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEe---------cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECC
Confidence 3456777877 777777765 55553 3445566666 8999999999999999999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEec
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGG 161 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~ 161 (183)
+.+. ...+..|...|.+++|+| ++ .+++++.||.|++||+++++. ...+..|...|.+++|+++..+++++
T Consensus 214 ~~~~------~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 214 TGDV------LRTYEGHESFVYCIKLLP-NG-DIVSCGEDRTVRIWSKENGSL-KQVITLPAISIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp TCCE------EEEEECCSSCEEEEEECT-TS-CEEEEETTSEEEEECTTTCCE-EEEEECSSSCEEEEEECTTSCEEEEE
T ss_pred chhh------hhhhhcCCceEEEEEEec-CC-CEEEEecCCEEEEEECCCCce-eEEEeccCceEEEEEEccCCCEEEEe
Confidence 7764 667888999999999999 66 688999999999999999876 77888999999999999875688899
Q ss_pred CCCcEEEEEecCCCCCCC
Q psy2113 162 QDNSVRVFKTKHQPKSGQ 179 (183)
Q Consensus 162 ~dg~i~iwd~~~~~~~~~ 179 (183)
.||.|++||+++++...+
T Consensus 285 ~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 285 SDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TTSCEEEEESCGGGCCC-
T ss_pred CCCcEEEEeCCCCceeeh
Confidence 999999999998765543
No 48
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=2.5e-23 Score=163.66 Aligned_cols=157 Identities=22% Similarity=0.328 Sum_probs=136.0
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.-.+.+++|+|++..++++. +.+|+ ...+..+..+.+|.++|.+++|+|++. |++++.|+.|++||+.
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWN-------YETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEE-------TTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEE-------CCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 34578899999999999875 55664 445677888999999999999998765 8999999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-C-cEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIMS 159 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~ 159 (183)
+++. ...+.+|...|.+++|+| ++.++++++.||.|++||++++......+.+|...|.+++|+| + ..+++
T Consensus 86 ~~~~------~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 86 TGEK------VVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp TCCE------EEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred CCcE------EEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence 8765 567788999999999999 8889999999999999999987554778889999999999998 4 79999
Q ss_pred ecCCCcEEEEEecCCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~~ 177 (183)
++.||.|++||++++...
T Consensus 159 ~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp EETTSEEEEEETTCSSCS
T ss_pred EeCCCeEEEEECCCCcce
Confidence 999999999999876543
No 49
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=5.5e-23 Score=156.25 Aligned_cols=147 Identities=29% Similarity=0.453 Sum_probs=125.3
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+|++..++.+. +++|+. ..+.+..+.+|...|.+++|+|++. |++++.|+.+++||...
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~--------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNR--------NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT--------TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeC--------CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 3467889999999988765 666642 4456788899999999999998875 88999999999999643
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
+. ...+.+|...|.+++|+| ++.++++++.|+.|++||. +++. +..+.+|...|++++|+|+ .+|++++
T Consensus 458 -~~------~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~-~~~~-~~~~~~h~~~v~~l~~s~dg~~l~s~~ 527 (577)
T 2ymu_A 458 -QL------LQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQL-LQTLTGHSSSVRGVAFSPDGQTIASAS 527 (577)
T ss_dssp -CE------EEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEET-TSCE-EEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred -CE------EEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcC-CCCE-EEEEeCCCCCEEEEEEcCCCCEEEEEE
Confidence 22 567889999999999999 8999999999999999996 4444 7788999999999999976 8999999
Q ss_pred CCCcEEEEEec
Q psy2113 162 QDNSVRVFKTK 172 (183)
Q Consensus 162 ~dg~i~iwd~~ 172 (183)
.||.|++||..
T Consensus 528 ~dg~v~lwd~~ 538 (577)
T 2ymu_A 528 DDKTVKLWNRN 538 (577)
T ss_dssp TTSEEEEECTT
T ss_pred CcCEEEEEeCC
Confidence 99999999953
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.6e-23 Score=153.50 Aligned_cols=153 Identities=20% Similarity=0.280 Sum_probs=123.9
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~ 84 (183)
....+|++++..++++. +.+|++ ...+....+.+|.+.|.+++|+|++. |++++.|+.|++||+++.+
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~-------~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDS-------NFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECT-------TSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeC-------CCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 34446899999988876 666754 34555666689999999999998875 8999999999999998876
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc---CCCcEEEEEe----------
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG---HEDKVMCVNW---------- 151 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~v~~~~~---------- 151 (183)
. ...+.+|...|.+++|+| ++.++++++.|+.|++||+++++. ...+.. +...+.+++|
T Consensus 173 ~------~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 244 (420)
T 3vl1_A 173 N------PRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTT-IHTFNRKENPHDGVNSIALFVGTDRQLHE 244 (420)
T ss_dssp C------CEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEE-EEEECBTTBTTCCEEEEEEEECCCSSCGG
T ss_pred C------ceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCce-eEEeecCCCCCCCccEEEEecCCcceeee
Confidence 5 557789999999999999 889999999999999999998875 555553 4445555554
Q ss_pred -----------cCC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 152 -----------SDY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 152 -----------~~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+|+ .++++++.||.|++||+++++..
T Consensus 245 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 245 ISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp GCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred cccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 544 79999999999999999887643
No 51
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=7.4e-24 Score=153.41 Aligned_cols=161 Identities=13% Similarity=0.109 Sum_probs=122.6
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
...+.+++|+|++..++.+. +++|++.... ...+...+.+|...|.+++|+|++. |++++.|+.|++||++
T Consensus 55 ~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 130 (377)
T 3dwl_C 55 DKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFE 130 (377)
T ss_dssp SSCEEEEEECTTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-
T ss_pred CceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEEC
Confidence 34577889999998888765 7778654211 1335677888999999999998865 8999999999999998
Q ss_pred CCCCccCceeEEEeec-CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC-----------------cceEEeccCC
Q psy2113 82 LGGMKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-----------------VPLFDMLGHE 143 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~-----------------~~~~~~~~~~ 143 (183)
..+.. .....+.. |...|.+++|+| +++++++++.|+.|++||++... .+...+ +|.
T Consensus 131 ~~~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 205 (377)
T 3dwl_C 131 QENDW---WVSKHLKRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG 205 (377)
T ss_dssp ----C---CCCEEECSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS
T ss_pred Ccccc---eeeeEeecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC
Confidence 76521 01335556 999999999999 88999999999999999986321 113344 899
Q ss_pred CcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 144 DKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 144 ~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
..|.+++|+|+ .+|++++.||.|++||+++++.
T Consensus 206 ~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 206 GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp SSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred ceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 99999999976 8999999999999999998876
No 52
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=1.5e-23 Score=153.36 Aligned_cols=160 Identities=23% Similarity=0.347 Sum_probs=123.1
Q ss_pred EEEeecCcEEEEE-----EeccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CC-eEEEEeCCCeEEEEEcCCCCC
Q psy2113 13 VIFMTVGALLTLT-----NIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VD-EIITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 13 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~~~d~~v~vwd~~~~~~ 85 (183)
++++|+...+... .+.+|++.... .....+..+.+|.+.|.+++|+| ++ .|++|+.|+.|++||+.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTG---RVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCE---ECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCC---CCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 5666666554431 26666543211 11234556789999999999998 65 489999999999999987643
Q ss_pred ccC-ceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe--ccCCCcEEEEEecCC-cEEEEec
Q psy2113 86 KKG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM--LGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 86 ~~~-~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
... ..+...+.+|...|.+++|+|++.+++++++.|+.|++||+++++. ...+ ..|...|.+++|+|+ .+|++++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA-VLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE-EEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc-cEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 111 1125577899999999999994347999999999999999998876 6667 789999999999965 8999999
Q ss_pred CCCcEEEEEecCCCC
Q psy2113 162 QDNSVRVFKTKHQPK 176 (183)
Q Consensus 162 ~dg~i~iwd~~~~~~ 176 (183)
.||.|++||+++++.
T Consensus 196 ~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTV 210 (402)
T ss_dssp TTSEEEEEETTTTEE
T ss_pred cCCcEEEEeCCCCce
Confidence 999999999987653
No 53
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=2.4e-23 Score=149.56 Aligned_cols=153 Identities=21% Similarity=0.369 Sum_probs=126.3
Q ss_pred eeEEEEEeec----CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEE
Q psy2113 9 LTLGVIFMTV----GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vw 78 (183)
.+.+++|+|+ +.+++++. +.+|++ ...+.+..+.+|...|.+++|+| ++. |++++.|+.|++|
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~-------~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iw 143 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINP-------ITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLW 143 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECT-------TTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEc-------hhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 4678899999 56777765 777754 35567788899999999999998 654 8999999999999
Q ss_pred EcCCCCCccCceeEEEe---ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc--------------------
Q psy2113 79 DAELGGMKKGAIVKSTF---SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP-------------------- 135 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~-------------------- 135 (183)
|+++++. ...+ ..|...|.+++|+| ++.++++++.||.|++||+++++..
T Consensus 144 d~~~~~~------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (366)
T 3k26_A 144 NIQTDTL------VAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFIS 216 (366)
T ss_dssp ETTTTEE------EEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCC
T ss_pred EeecCeE------EEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccc
Confidence 9987654 4445 57999999999999 8899999999999999999876431
Q ss_pred -------eEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 136 -------LFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 136 -------~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
......|...|.+++|+ +.++++++.||.|++||+++...
T Consensus 217 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 217 QKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp EEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTC
T ss_pred eeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccc
Confidence 12233489999999999 67999999999999999988765
No 54
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=6.2e-23 Score=151.46 Aligned_cols=165 Identities=22% Similarity=0.335 Sum_probs=129.2
Q ss_pred ceeEEEEEeecCc-EEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CC-eEEEEeCCCeEEEEEc
Q psy2113 8 ILTLGVIFMTVGA-LLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VD-EIITSSWDHTLKIWDA 80 (183)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~~~d~~v~vwd~ 80 (183)
..+.+++|+|++. .++++. +.+|.+...............+.+|...|.+++|+| ++ .|++++.|+.|++||+
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 3457789999988 776654 777766532111112233567789999999999998 33 4889999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIM 158 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~ 158 (183)
+...... ....+..|...|.+++|+|++..++++|+.||.|++||+++...++..+..|...|.+++|+|+ .+++
T Consensus 262 ~~~~~~~---~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 262 RNNNTSK---PSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp TCSCSSS---CSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCCCCCc---ceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 8763111 1445678999999999999544589999999999999999866568888999999999999975 4799
Q ss_pred EecCCCcEEEEEecCCC
Q psy2113 159 SGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~ 175 (183)
+++.||.|++||++...
T Consensus 339 s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EEETTSCCEEEEGGGTT
T ss_pred EEeCCCcEEEEeCCCCc
Confidence 99999999999998743
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=1.2e-22 Score=144.52 Aligned_cols=160 Identities=21% Similarity=0.358 Sum_probs=130.0
Q ss_pred eceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEe--ccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 7 GILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLK--GHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
.-.+.+++|+|++.+++++. +.+|++... .....+..+. .|...|.+++|+|++. +++++.|+.|++||+
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDISHP----GNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp SSCCCEEEECSSSSEEEEECBSEEEEEETTST----TCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred CCceEEEEEecCCcEEEEcCCCeEEEEECCCC----CceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 34567889999999988865 666655321 1223344444 7899999999998875 889999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~ 159 (183)
++.+.. ....+..|...+.+++|+| +++++++++.||.|++||+++++. ...+..|...|.+++|+|+ .++++
T Consensus 127 ~~~~~~----~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 127 AAPTPR----IKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTL-VRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp CCC--E----EEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCcc----eeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCce-eeeeecccCceEEEEECCCCCEEEE
Confidence 876531 2456778999999999999 889999999999999999998765 7788889999999999966 89999
Q ss_pred ecCCCcEEEEEecCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~ 176 (183)
++.||.|++||+++++.
T Consensus 201 ~~~dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQ 217 (337)
T ss_dssp EETTSEEEEEETTTTEE
T ss_pred EecCCcEEEEECCCCce
Confidence 99999999999987653
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2e-23 Score=157.44 Aligned_cols=161 Identities=9% Similarity=0.064 Sum_probs=125.4
Q ss_pred eeEEEEEeec------CcEEEEEE----eccCCCCccccc----ccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCe
Q psy2113 9 LTLGVIFMTV------GALLTLTN----IEVTSLPSFFQL----ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHT 74 (183)
Q Consensus 9 ~~~~~~~~~~------~~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~ 74 (183)
.+.+++|+|+ +.+++.+. +++|++...... .....+...+.+|...|.+++|++++.|++|+.||+
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~Dgt 288 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGF 288 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSE
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCE
Confidence 3678899997 45777655 778876532110 012234567889999999999998888999999999
Q ss_pred EEEEEcCCCCCccCceeEEEeecCCcceEEE--EEecCCC-CEEEEEeCCCeEEEEeCCCCCcceEEeccCCC--cEEEE
Q psy2113 75 LKIWDAELGGMKKGAIVKSTFSSHKEWVQSV--RWSPIDP-QLFVSASFDNSVKLWDLRSPKVPLFDMLGHED--KVMCV 149 (183)
Q Consensus 75 v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~p~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~--~v~~~ 149 (183)
|++||++++.. +...+.+|...|.++ .|+| ++ .+|++|+.|++|++||+++++. ...+.+|.. .|.++
T Consensus 289 V~lWD~~~~~~-----~~~~~~~H~~~V~sv~~~~s~-~g~~~laS~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 289 VAEFDLTDPEV-----PSFYDQVHDSYILSVSTAYSD-FEDTVVSTVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPV 361 (524)
T ss_dssp EEEEETTBCSS-----CSEEEECSSSCEEEEEEECCT-TSCCEEEEEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCE
T ss_pred EEEEECCCCCC-----ceEEeecccccEEEEEEEcCC-CCCeEEEEeccCCeEEEEECCCCCc-ccccccccccCcccce
Confidence 99999986532 134578899999999 4677 66 8999999999999999998765 444555543 58899
Q ss_pred EecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 150 NWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 150 ~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+|+|+ ..+++++.|++|++||++++..
T Consensus 362 ~fsp~~~~l~s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEETTTTEEEEECSSSEEEEEETTCTTC
T ss_pred EeCCCcCeEEEeCCCCcEEEEECccccc
Confidence 99985 7899999999999999988654
No 57
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=1.8e-22 Score=144.99 Aligned_cols=155 Identities=19% Similarity=0.369 Sum_probs=123.9
Q ss_pred eceeEEEEEeec---Cc--EEEEEE---eccCCCCcccccccCccceEEEec-----cCCCeeEEEEccC----Ce-EEE
Q psy2113 7 GILTLGVIFMTV---GA--LLTLTN---IEVTSLPSFFQLILQKTPLITLKG-----HKEAISAVQWTAV----DE-IIT 68 (183)
Q Consensus 7 ~~~~~~~~~~~~---~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~----~~-l~s 68 (183)
.-.+.+++|+|+ +. ++++.. +.+|++. ....+..+.. |...|.+++|+|+ +. |++
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECH-------SQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEEC-------GGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcC-------CCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 446788999984 33 444443 6666543 3333444443 5678999999977 33 899
Q ss_pred EeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe---ccCCCc
Q psy2113 69 SSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM---LGHEDK 145 (183)
Q Consensus 69 ~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~ 145 (183)
|+.|+.|++||+.+.+. ...+.+|...|.+++|+|.++.++++++.||.|++||+++++. ...+ ..|...
T Consensus 91 ~~~dg~i~v~d~~~~~~------~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~ 163 (366)
T 3k26_A 91 AGSRGIIRIINPITMQC------IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL-VAIFGGVEGHRDE 163 (366)
T ss_dssp EETTCEEEEECTTTCCE------EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE-EEEECSTTSCSSC
T ss_pred ecCCCEEEEEEchhceE------eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE-EEEecccccccCc
Confidence 99999999999987664 6678889999999999996678999999999999999998875 5555 689999
Q ss_pred EEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 146 VMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 146 v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
|.+++|+|+ .+|++++.||.|++||+++++
T Consensus 164 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 164 VLSADYDLLGEKIMSCGMDHSLKLWRINSKR 194 (366)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred eeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence 999999965 899999999999999998653
No 58
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=3e-22 Score=145.35 Aligned_cols=153 Identities=14% Similarity=0.179 Sum_probs=122.8
Q ss_pred eceeEEEEEeecC-cEEEEEE----eccCCCCcccccccCccceEEE--eccCCCeeEEEEcc-CC-eEEEEeCCCeEEE
Q psy2113 7 GILTLGVIFMTVG-ALLTLTN----IEVTSLPSFFQLILQKTPLITL--KGHKEAISAVQWTA-VD-EIITSSWDHTLKI 77 (183)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~-~~-~l~s~~~d~~v~v 77 (183)
.-.+.+++|+|++ .+++++. +.+|++. ..+....+ .+|.+.|.+++|+| ++ .|++++.|+.|++
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYD-------VQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETT-------STTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCC-------CcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 3456788999999 7777765 6677543 33334444 36999999999998 43 4899999999999
Q ss_pred EEcCCCCCccCceeEEEee---cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC
Q psy2113 78 WDAELGGMKKGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 154 (183)
||++... ...+. .|...|.+++|+| ++.++++|+.|+.|++||++ ++. ...+.+|...|.+++|+|+
T Consensus 146 wd~~~~~-------~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~-~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 146 RDFSGSV-------IQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGLD-GHE-IFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EETTSCE-------EEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEETT-SCE-EEEEECSSSCEEEEEECSS
T ss_pred EECCCCc-------eEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEECC-CCE-EEEeccCCCcEEEEEECCC
Confidence 9998532 33343 3458899999999 88999999999999999995 343 7788899999999999976
Q ss_pred -c-EEEEecCCCcEEEEEecCCCC
Q psy2113 155 -R-YIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 155 -~-~l~~~~~dg~i~iwd~~~~~~ 176 (183)
. ++++++.|+.|++||+++.+.
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCc
Confidence 5 899999999999999998543
No 59
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=1.2e-22 Score=166.16 Aligned_cols=155 Identities=23% Similarity=0.386 Sum_probs=134.9
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.-.+.+++|+|++..++++. +.+|+ ....+.+..+.+|.+.|.+++|+|++. +++++.|+.|++||+.
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~-------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~ 687 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFK-------AETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSA 687 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE-------TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEE-------CCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECC
Confidence 34577889999999998876 66664 456677888999999999999998875 8899999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecC-CCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~ 159 (183)
+++. ...+.+|...|.+++|+|+ +..++++|+.|+.|++||++++.. ...+.+|...|++++|+|+ .++++
T Consensus 688 ~~~~------~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~-~~~~~~h~~~v~~~~~sp~~~~l~s 760 (1249)
T 3sfz_A 688 TGKL------VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC-RNTMFGHTNSVNHCRFSPDDELLAS 760 (1249)
T ss_dssp TCCE------EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE-EEEECCCSSCEEEEEECSSTTEEEE
T ss_pred CCce------EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch-hheecCCCCCEEEEEEecCCCEEEE
Confidence 8765 6678899999999999994 345889999999999999999876 7788899999999999976 89999
Q ss_pred ecCCCcEEEEEecCCC
Q psy2113 160 GGQDNSVRVFKTKHQP 175 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~ 175 (183)
++.||.|++||+++++
T Consensus 761 ~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSAN 776 (1249)
T ss_dssp EESSSEEEEEEGGGTE
T ss_pred EECCCeEEEEeCCCCc
Confidence 9999999999998764
No 60
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-22 Score=150.75 Aligned_cols=160 Identities=14% Similarity=0.105 Sum_probs=127.4
Q ss_pred eeEEEEEeecCcEE-EEEE----eccCCCCcccccccCccceEEEe--ccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 9 LTLGVIFMTVGALL-TLTN----IEVTSLPSFFQLILQKTPLITLK--GHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 9 ~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
.+.+++|+|++..+ +++. +.+|++.. .....+..+. .|...|.+++|+|++. |++++.++.+++|++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDK-----TSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDI 178 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECS-----SSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcC-----CCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEec
Confidence 47889999999986 5553 66675421 1445556665 5678999999998875 889999999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCC---CCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPID---PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYI 157 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l 157 (183)
.+...... ....+.+|...|.+++|+| + +.+|++|+.|+.|++||++++......+.+|...|.+++|+++.+|
T Consensus 179 ~~~~~~~~--~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l 255 (450)
T 2vdu_B 179 NSIPEEKF--TQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLL 255 (450)
T ss_dssp TSCCCSSC--CCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEE
T ss_pred CCcccccc--cceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEE
Confidence 87654210 1225667999999999999 7 8899999999999999999887633336689999999999944899
Q ss_pred EEecCCCcEEEEEecCCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~~ 176 (183)
++++.|+.|++||+++++.
T Consensus 256 ~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp EEEESSSEEEEEETTTCCE
T ss_pred EEEeCCCeEEEEECCCCcE
Confidence 9999999999999988763
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.3e-22 Score=148.40 Aligned_cols=151 Identities=17% Similarity=0.192 Sum_probs=129.7
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 83 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 83 (183)
..+.+++|+|++..++++. +.+|++ ...+.+..+..|...|.+++|+|++.+++++.|+.|++||+++.
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~-------~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHG-------GNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQN 320 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECS-------SSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTT
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEEC-------CCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCC
Confidence 3567889999999888876 666644 34566778889999999999999889999999999999999876
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC-------------------cceEEeccCCC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-------------------VPLFDMLGHED 144 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~-------------------~~~~~~~~~~~ 144 (183)
+. ...+..|...+.+++|+| +++++++++.||.|++||+++.. .++..+..|..
T Consensus 321 ~~------~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (425)
T 1r5m_A 321 TL------LALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD 393 (425)
T ss_dssp EE------EEEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTC
T ss_pred cE------eEecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc
Confidence 64 567778999999999999 88999999999999999998765 13677888876
Q ss_pred --cEEEEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 145 --KVMCVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 145 --~v~~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
.|++++|+++ .+|++++.||.|++||++
T Consensus 394 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 394 NDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 9999999966 899999999999999986
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=4.6e-22 Score=145.47 Aligned_cols=155 Identities=21% Similarity=0.421 Sum_probs=130.4
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL 82 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~ 82 (183)
...+.+++|+|++..++++. +.+|+ ....+.+..+.+|...|.+++|+ ...+++++.|+.|++||++.
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd-------~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~ 205 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYD-------VESQTKLRTMAGHQARVGCLSWN-RHVLSSGSRSGAIHHHDVRI 205 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEE-------TTTCCEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTS
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEE-------CcCCeEEEEecCCCCceEEEEEC-CCEEEEEcCCCCEEEEeccc
Confidence 34577899999999998876 56664 34567788889999999999994 46799999999999999985
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC--cEEEEe
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSG 160 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~ 160 (183)
... ....+.+|...|.+++|+| ++.++++|+.|+.|++||+++... ...+..|...|.+++|+|+ ..++++
T Consensus 206 ~~~-----~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 206 ANH-----QIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIP-KFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp SSC-----EEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSE-EEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred Ccc-----eeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCc-cEEecCCcceEEEEEECCCCCCEEEEe
Confidence 432 2567788999999999999 889999999999999999998775 7778899999999999974 677776
Q ss_pred c--CCCcEEEEEecCCCC
Q psy2113 161 G--QDNSVRVFKTKHQPK 176 (183)
Q Consensus 161 ~--~dg~i~iwd~~~~~~ 176 (183)
+ .|+.|++||+++++.
T Consensus 279 ~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 279 GGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp CCTTTCEEEEEETTTCCE
T ss_pred cCCCCCEEEEEECCCCCE
Confidence 5 799999999987654
No 63
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.8e-22 Score=156.94 Aligned_cols=159 Identities=25% Similarity=0.319 Sum_probs=127.0
Q ss_pred ceeEEEEEeecC-cEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMTVG-ALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
-.+.+++|+|++ .+++++. +++|++.... .........+.+|...|.+++|+|++. |++|+.|+.|++||+.
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~--~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDD--KAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLA 460 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCST--TCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCC--cccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 346788899875 5666554 7888764321 122344567899999999999998876 8899999999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEE---eccCCCcEEEEEecCC---c
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD---MLGHEDKVMCVNWSDY---R 155 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~---~ 155 (183)
++.. ...+.+|...|.+++|+| +++++++|+.|+.|++||...... ... ..+|...|.+++|+|+ .
T Consensus 461 ~~~~------~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 461 AGVS------TRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp TTEE------EEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred CCcc------eeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 7664 567889999999999999 889999999999999999875432 222 2468889999999975 5
Q ss_pred EEEEecCCCcEEEEEecCCCC
Q psy2113 156 YIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+++++.|+.|++||+++.+.
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~ 553 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKL 553 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCE
T ss_pred eEEEEeCCCeEEEEECCCCcE
Confidence 899999999999999987653
No 64
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.7e-22 Score=142.88 Aligned_cols=162 Identities=19% Similarity=0.232 Sum_probs=128.6
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.-.+.+++|+|++.+++++. +.+|+ ....+.+..+.+|.+.|.+++|+|++. |++++.|+.|++||+.
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd-------~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWY-------SLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEE-------TTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEe-------CCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34577889999999988876 66663 446677888999999999999998765 8999999999999998
Q ss_pred CCCCccC-------------------------------ce--------------------eEEEeecCCc--ceEEEEEe
Q psy2113 82 LGGMKKG-------------------------------AI--------------------VKSTFSSHKE--WVQSVRWS 108 (183)
Q Consensus 82 ~~~~~~~-------------------------------~~--------------------~~~~~~~~~~--~v~~~~~~ 108 (183)
+.+.... .. ....+..|.. .+.+++|+
T Consensus 105 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 105 NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp TCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred CCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 7543210 00 0111122222 78899999
Q ss_pred cCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 109 p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
| +++++++++.||.|++||+++.......+..|...|.+++|+|+ .+|++++.||.|++||+++.+.
T Consensus 185 ~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 185 T-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp G-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred C-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 9 88899999999999999999854447888899999999999966 8999999999999999987654
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=2.1e-22 Score=145.12 Aligned_cols=153 Identities=14% Similarity=0.228 Sum_probs=125.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCcc--ceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKT--PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
.+.+++|+|++.+++++. +.+|++ ...+ .+..+.+|...|.+++|+|++. |++++.|+.|++||++
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~-------~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEK-------SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEE-------ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeC-------CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 456789999999998874 666643 3333 7788899999999999998765 8899999999999997
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc---ceEEeccCCCcEEEEEecCC-cEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV---PLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
+.+.. ....+..|...|.+++|+| +++++++++.|+.|++||++.... .......|...|.+++|+|+ .++
T Consensus 83 ~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 83 GRTWK----PTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp TTEEE----EEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred CCeee----eeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 66531 1233467899999999999 889999999999999999998763 13344678999999999966 899
Q ss_pred EEecCCCcEEEEEecC
Q psy2113 158 MSGGQDNSVRVFKTKH 173 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~ 173 (183)
++++.||.|++||++.
T Consensus 158 ~~~~~dg~i~~~d~~~ 173 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYI 173 (372)
T ss_dssp EEEETTSCEEEEECCC
T ss_pred EEEcCCCCEEEEEccc
Confidence 9999999999999763
No 66
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=3.4e-23 Score=147.19 Aligned_cols=124 Identities=23% Similarity=0.385 Sum_probs=101.0
Q ss_pred EEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecC-CCCEEEEEeCCCeE
Q psy2113 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSV 124 (183)
Q Consensus 47 ~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i 124 (183)
.+.+|.+.|++++|+|++. |++|+.|++|++||++++.. .....+.+|...|.+++|+|. ++++|++|+.|+.|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~----~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ----ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE----EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc----EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 4568999999999998765 89999999999999976532 124568899999999999762 47899999999999
Q ss_pred EEEeCCCCC-cceEEeccCCCcEEEEEecC---CcEEEEecCCCcEEEEEecCC
Q psy2113 125 KLWDLRSPK-VPLFDMLGHEDKVMCVNWSD---YRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 125 ~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~---~~~l~~~~~dg~i~iwd~~~~ 174 (183)
++||++++. .....+.+|...|++++|+| +.+|++++.|+.|++||++..
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 999999864 23566788999999999996 368999999999999999865
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=2.2e-23 Score=154.07 Aligned_cols=155 Identities=17% Similarity=0.215 Sum_probs=120.1
Q ss_pred eceeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEEe---ccCCCeeEEEEccCCe-EEEEeCCCeEEE
Q psy2113 7 GILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLK---GHKEAISAVQWTAVDE-IITSSWDHTLKI 77 (183)
Q Consensus 7 ~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~-l~s~~~d~~v~v 77 (183)
.-.+.+++|+| ++..++.+. +++|++. . .....+. .+...+.+++|+|++. |++|+.|+.|++
T Consensus 164 ~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 164 GGSITGLKFNPLNTNQFYASSMEGTTRLQDFK-------G-NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp SCCCCEEEECSSCTTEEEEECSSSCEEEEETT-------S-CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-------C-CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 34567889998 577777654 7777542 1 1222222 2344678999998765 889999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc--eEEeccCCCcEEEEEecCC-
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP--LFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~- 154 (183)
||++... ...+.+|...|.+++|+|++..++++|+.|+.|++||+++.+.. .....+|...|++++|+|+
T Consensus 236 wd~~~~~-------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg 308 (435)
T 4e54_B 236 LNMDGKE-------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG 308 (435)
T ss_dssp EESSSCB-------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS
T ss_pred eccCcce-------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCC
Confidence 9987543 34577899999999999955668999999999999999886542 2334679999999999965
Q ss_pred cEEEEecCCCcEEEEEecCCCC
Q psy2113 155 RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+|++++.||.|++||+++++.
T Consensus 309 ~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 309 ARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp SEEEEEESSSCEEEEESSSSSS
T ss_pred CeeEEEcCCCEEEEEECCCCcc
Confidence 8999999999999999987653
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=1.1e-21 Score=139.39 Aligned_cols=152 Identities=16% Similarity=0.283 Sum_probs=128.5
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
.+.+++|+|++..++++. +.+|+ ....+.+..+..|.+.|.+++|+|++. +++++.|+.|++||+++.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~dg~v~~~d-------~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCSDGNIAVWD-------LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEe-------CCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 467889999999888775 55553 345667788889999999999998865 889999999999999876
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQ 162 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~ 162 (183)
+. ... ..+...+.+++|+| ++.++++++.|+.|++||+++.+ ...+..|...|.+++|+|+ .++++++.
T Consensus 216 ~~------~~~-~~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 216 RQ------LQQ-HDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp EE------EEE-EECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ce------Eee-ecCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecC
Confidence 53 333 34788899999999 88999999999999999999876 4577889999999999965 89999999
Q ss_pred CCcEEEEEecCCCCC
Q psy2113 163 DNSVRVFKTKHQPKS 177 (183)
Q Consensus 163 dg~i~iwd~~~~~~~ 177 (183)
||.|++||+++++..
T Consensus 286 dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 286 DNLLNAWRTPYGASI 300 (337)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCeEE
Confidence 999999999887543
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=2.4e-22 Score=145.87 Aligned_cols=156 Identities=20% Similarity=0.254 Sum_probs=123.3
Q ss_pred eeceeEEEEEee-cCcEEEEEE----eccCCCCcccccccCccceEEEec---cCCCeeEEEEccCCe-EEEEeCCCeEE
Q psy2113 6 FGILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKG---HKEAISAVQWTAVDE-IITSSWDHTLK 76 (183)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~-l~s~~~d~~v~ 76 (183)
....+.+++|+| ++..++++. +.+|++. ...+..+.. |...|.+++|+|++. |++++.|+.|+
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS--------GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETT--------SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC--------CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 344677889999 677777765 6677553 233444544 448899999998765 89999999999
Q ss_pred EEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCC-EEEEEeCCCeEEEEeCCCCCc--ceEEeccCCCcEEEEEecC
Q psy2113 77 IWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSD 153 (183)
Q Consensus 77 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~v~~~~~~~ 153 (183)
+||++ .+. ...+..|...|.+++|+| ++. ++++++.|+.|++||+++.+. ......+|...|.+++|+|
T Consensus 189 i~d~~-~~~------~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~ 260 (383)
T 3ei3_B 189 LLGLD-GHE------IFKEKLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNP 260 (383)
T ss_dssp EEETT-SCE------EEEEECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECT
T ss_pred EEECC-CCE------EEEeccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcC
Confidence 99984 322 567888999999999999 666 999999999999999997321 1233337999999999998
Q ss_pred -C-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 154 -Y-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 154 -~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+ .+|++++.|+.|++||+++.+..
T Consensus 261 ~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 261 TDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp TTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCccc
Confidence 5 89999999999999999887654
No 70
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.6e-23 Score=157.94 Aligned_cols=152 Identities=14% Similarity=0.166 Sum_probs=121.2
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEE--EEccCC--eEEEEeCCCeEEEEE
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAV--QWTAVD--EIITSSWDHTLKIWD 79 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~--~~~~~~--~l~s~~~d~~v~vwd 79 (183)
..+.+++|++++ .++++. +++|++.. ...+...+.+|.+.|.++ .|++++ .|++|+.|++|+|||
T Consensus 267 ~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~------~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSPT-TVVCGFKNGFVAEFDLTD------PEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSSS-EEEEEETTSEEEEEETTB------CSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCCC-eEEEEeCCCEEEEEECCC------CCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 457789999876 455544 77786532 123456788999999999 466765 489999999999999
Q ss_pred cCCCCCccCceeEEEeecCCc--ceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cE
Q psy2113 80 AELGGMKKGAIVKSTFSSHKE--WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RY 156 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 156 (183)
+++.+. ...+.+|.. .|.+++|+| ++..+++++.|+.|++||++++.+ ...+.+|...|++++|+|+ ..
T Consensus 340 ~~~~~~------~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 340 PKDIAT------TKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp GGGHHH------HCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCCB
T ss_pred CCCCCc------ccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCCe
Confidence 987554 223445543 588999999 788899999999999999999876 5677899999999999976 89
Q ss_pred EEEecCCCcEEEEEecCC
Q psy2113 157 IMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 157 l~~~~~dg~i~iwd~~~~ 174 (183)
|++|+.||+|++||+...
T Consensus 412 l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 412 VLAGSADGSLIITNAARR 429 (524)
T ss_dssp CEEEETTTEEECCBSCSS
T ss_pred EEEEECCCEEEEEechHh
Confidence 999999999999998654
No 71
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=8.2e-23 Score=150.77 Aligned_cols=167 Identities=16% Similarity=0.261 Sum_probs=126.7
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccc----cccCccceEEEeccC------------CCeeEEEEccCC---
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQ----LILQKTPLITLKGHK------------EAISAVQWTAVD--- 64 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~~h~------------~~v~~~~~~~~~--- 64 (183)
-.+.+++|+|++.+++++. +.+|++..... .....+....+.+|. +.|.+++|+|++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~ 108 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA 108 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc
Confidence 3577899999999999876 77776543211 011223577888998 889999999875
Q ss_pred eEEEEeCCCeEEEEEcCCCCCccC---------------------------------ceeEEE-eecCCcceEEEEEecC
Q psy2113 65 EIITSSWDHTLKIWDAELGGMKKG---------------------------------AIVKST-FSSHKEWVQSVRWSPI 110 (183)
Q Consensus 65 ~l~s~~~d~~v~vwd~~~~~~~~~---------------------------------~~~~~~-~~~~~~~v~~~~~~p~ 110 (183)
.|++++.|+.|++||+........ ..+... ..+|...|.+++|+|
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~- 187 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS- 187 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT-
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC-
Confidence 599999999999999875322000 000112 357999999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCcceE-------EeccCCCcEEEEEecCC--cEEEEecCCCcEEEEEecCCCC
Q psy2113 111 DPQLFVSASFDNSVKLWDLRSPKVPLF-------DMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 111 ~~~~l~~~~~dg~i~vwd~~~~~~~~~-------~~~~~~~~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++.++++| .|+.|++||+++...... .+.+|...|++++|+|+ .+|++++.||.|++||+++++.
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 88899998 799999999995433233 25689999999999965 7999999999999999998764
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=3.3e-22 Score=147.62 Aligned_cols=168 Identities=20% Similarity=0.375 Sum_probs=130.7
Q ss_pred eeEEEEEeec-CcEEEEEE----eccCCCCccccc---ccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEEEE
Q psy2113 9 LTLGVIFMTV-GALLTLTN----IEVTSLPSFFQL---ILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~vw 78 (183)
.+..++|+|+ +.+++++. +.+|++...... .....++..+.+|...|.+++|+|++ .|++|+.||.|++|
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 209 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLW 209 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEE
Confidence 4667899997 56676654 666655321100 12256788899999999999999865 58999999999999
Q ss_pred EcCCCCCc-cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC--cceEEeccCCCcEEEEEecCC-
Q psy2113 79 DAELGGMK-KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 79 d~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~- 154 (183)
|+...... ........+.+|...|.+++|+|.++.++++++.||.|++||+++.. .+...+..|...|++++|+|.
T Consensus 210 d~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~ 289 (430)
T 2xyi_A 210 DINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS 289 (430)
T ss_dssp ETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC
T ss_pred eCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC
Confidence 99874321 11112345668999999999999777899999999999999999873 346777899999999999975
Q ss_pred -cEEEEecCCCcEEEEEecCCCC
Q psy2113 155 -RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 155 -~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
..+++|+.||.|++||++....
T Consensus 290 ~~~l~tg~~dg~v~vwd~~~~~~ 312 (430)
T 2xyi_A 290 EFILATGSADKTVALWDLRNLKL 312 (430)
T ss_dssp TTEEEEEETTSEEEEEETTCTTS
T ss_pred CCEEEEEeCCCeEEEEeCCCCCC
Confidence 3789999999999999998543
No 73
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.2e-21 Score=141.36 Aligned_cols=160 Identities=21% Similarity=0.327 Sum_probs=128.8
Q ss_pred eceeEEEEEeec--CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccC--C-eEEEEeCCCeEEE
Q psy2113 7 GILTLGVIFMTV--GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKI 77 (183)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~~~d~~v~v 77 (183)
...+.+++|+++ +..++++. +.+|++.. .....+..+..|...|.+++|+|+ + .+++++.|+.|++
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-----GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET-----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC-----CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 345678889877 88888765 66664321 122367778889999999999986 4 4899999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecC------------CCCEEEEEeCCCeEEEEeCCCCCc---ceEEeccC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI------------DPQLFVSASFDNSVKLWDLRSPKV---PLFDMLGH 142 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~------------~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~ 142 (183)
||++...... ...+..|...|.+++|+|. ++.++++++.||.|++||+++... ....+.+|
T Consensus 130 ~d~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h 205 (379)
T 3jrp_A 130 VEFKENGTTS----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 205 (379)
T ss_dssp EECCTTSCCC----EEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EecCCCCcee----eEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecc
Confidence 9998764322 4456789999999999994 478999999999999999987653 24567789
Q ss_pred CCcEEEEEecC----CcEEEEecCCCcEEEEEecCCC
Q psy2113 143 EDKVMCVNWSD----YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 143 ~~~v~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...|.+++|+| +.+|++++.||.|++||++...
T Consensus 206 ~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 206 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 99999999996 4789999999999999999864
No 74
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.90 E-value=7.2e-22 Score=145.30 Aligned_cols=158 Identities=21% Similarity=0.346 Sum_probs=122.8
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe--EEE--EeCCCeEEEEEc
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE--IIT--SSWDHTLKIWDA 80 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s--~~~d~~v~vwd~ 80 (183)
....+.++|++..++.+. +.+|.... .......+.....|...|.+++|+|.+. +++ |+.|+.|++||+
T Consensus 232 ~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~---~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 232 EVCGLRWAPDGRHLASGGNDNLVNVWPSAP---GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEESSC---CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred ceeeeeecCCCCeeeeeeccccceEEeecc---ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 456788999999988765 55554432 1123345677788999999999997643 444 457999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe--CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS--FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
.++.. ...+. +...+.++.|+| ++..+++++ .|+.|++||+++++. +..+.+|.+.|++++|+|+ .+|
T Consensus 309 ~t~~~------~~~~~-~~~~v~~~~~~~-~~~~lv~~sg~~d~~I~iwd~~~~~~-v~~l~gH~~~V~~l~~spdg~~l 379 (420)
T 4gga_A 309 CSGAC------LSAVD-AHSQVCSILWSP-HYKELISGHGFAQNQLVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATV 379 (420)
T ss_dssp TTTEE------EEEEE-CSSCEEEEEEET-TTTEEEEEECTTTCCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSCE
T ss_pred Ccccc------ceeec-cccceeeeeecC-CCCeEEEEEecCCCEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCCEE
Confidence 88764 44444 456789999999 666666654 689999999999886 8889999999999999975 899
Q ss_pred EEecCCCcEEEEEecCCCCCC
Q psy2113 158 MSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 158 ~~~~~dg~i~iwd~~~~~~~~ 178 (183)
++|+.|++|++||+.......
T Consensus 380 ~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 380 ASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp EEEETTTEEEEECCSCSSCC-
T ss_pred EEEecCCeEEEEECCCCCccc
Confidence 999999999999998765443
No 75
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.9e-22 Score=150.07 Aligned_cols=155 Identities=14% Similarity=0.164 Sum_probs=121.0
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCC-----CeeEEEEccCCe-EEEEeCCCeEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKE-----AISAVQWTAVDE-IITSSWDHTLK 76 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~-l~s~~~d~~v~ 76 (183)
.-...+++|+|+|..++++. +.+|+.. ..+..+. |.. .|.+++|+|+|+ |++|+.||+|+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~---------~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDN---------KMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETT---------EEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCC---------ceeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 34578999999999999876 5666421 1455556 665 599999999987 89999999999
Q ss_pred EEEcCCCCCcc-CceeEEEe----ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc--ceEEe-ccCCCcEEE
Q psy2113 77 IWDAELGGMKK-GAIVKSTF----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDM-LGHEDKVMC 148 (183)
Q Consensus 77 vwd~~~~~~~~-~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~--~~~~~-~~~~~~v~~ 148 (183)
+||+..+.... .......+ .+|...|.+++|+| ++ +++++.|+.|++||+.+... ....+ .+|...|.+
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 99998764311 11224454 66788999999999 66 88888999999999988763 12445 478899999
Q ss_pred EEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 149 VNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 149 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++|+ ++.+++++ +++|++||+..++.
T Consensus 232 vaFs-g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 232 LKIV-DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp EEEE-TTEEEEEC-SSEEEEEETTTTEE
T ss_pred EEEE-CCEEEEEe-CCeEEEEECCCCeE
Confidence 9999 78888887 69999999887654
No 76
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.6e-22 Score=144.03 Aligned_cols=129 Identities=16% Similarity=0.116 Sum_probs=104.5
Q ss_pred CccceEEEe-ccCCCeeEEEEcc--CCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEe-ecCCcceEEEEEecCCCCEE
Q psy2113 41 QKTPLITLK-GHKEAISAVQWTA--VDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTF-SSHKEWVQSVRWSPIDPQLF 115 (183)
Q Consensus 41 ~~~~~~~~~-~h~~~v~~~~~~~--~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l 115 (183)
..+.+..+. +|.+.|.+++|+| ++. +++++.|+.|++||+++++. .... ..+...+.+++|+| ++.++
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~------~~~~~~~~~~~i~~~~~~p-dg~~l 185 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ------YIVHSAKSDVEYSSGVLHK-DSLLL 185 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE------EEEECCCSSCCCCEEEECT-TSCEE
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE------EEEEecCCCCceEEEEECC-CCCEE
Confidence 333344443 6778999999999 765 88899999999999987664 2233 34566899999999 89999
Q ss_pred EEEeCCCeEEEEeCCCCCcceEEecc-CCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 116 VSASFDNSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 116 ~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
++|+.||.|++||+++++.....+.. |..+|++++|+|+ .+|++++ |+.|++||+++.+..
T Consensus 186 asg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 186 ALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp EEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred EEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 99999999999999998874367777 9999999999976 7888888 559999999987654
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.4e-22 Score=157.61 Aligned_cols=161 Identities=23% Similarity=0.376 Sum_probs=132.7
Q ss_pred ceeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccC--C-eEEEEeCCCeEEE
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKI 77 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~~~d~~v~v 77 (183)
...-.+.+++|+|++..++++. +.+|++. ......+..+.+|.+.|.+++|+++ + .+++|+.||.|++
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~-----~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVE-----GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEE-----TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecC-----CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 3445678889999999888875 6777542 2245667888999999999999864 4 5999999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCC--CCEEEEEeCCCeEEEEeCCCCC-cceEEeccCCCcEEEEEecC-
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLRSPK-VPLFDMLGHEDKVMCVNWSD- 153 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~--~~~l~~~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~- 153 (183)
||+.++... ....+.+|...|.+++|+| + +..+++|+.||.|++||+++.. .......+|...|.+++|+|
T Consensus 82 wd~~~~~~~----~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 82 WKEENGRWS----QIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEETTEEE----EEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EECCCCccc----ccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999876421 2556778999999999999 6 8899999999999999999873 22556788999999999997
Q ss_pred -------------CcEEEEecCCCcEEEEEecCCC
Q psy2113 154 -------------YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 154 -------------~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+..+++|+.||.|++||++++.
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp C---------CGGGCCEEEEETTSCEEEEEEETTT
T ss_pred ccccccccccCCCCCEEEEEECCCeEEEEeccCCc
Confidence 4899999999999999998764
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=5e-22 Score=144.53 Aligned_cols=160 Identities=18% Similarity=0.172 Sum_probs=124.6
Q ss_pred ceeEEEEEe----ecCcE-EEEEE----eccCCCCcccccccCccceE-----EE-------eccCCCeeEEEEccCCeE
Q psy2113 8 ILTLGVIFM----TVGAL-LTLTN----IEVTSLPSFFQLILQKTPLI-----TL-------KGHKEAISAVQWTAVDEI 66 (183)
Q Consensus 8 ~~~~~~~~~----~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~-------~~h~~~v~~~~~~~~~~l 66 (183)
..+.+++|+ |++.. ++++. +.+|++...... ...+.+. .+ ..|...|.+++|+|++.+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE-SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH-HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc-cccceeeccCcceeeeeeccccCCCCCceEEEECCCceE
Confidence 456788999 99998 77765 666654320000 0022222 55 448899999999987777
Q ss_pred EEEeCCCeEEEEEcCCCCCccCceeEEEeec---C---CcceEEEEEecCCCCEEEEEeCC---CeEEEEeCCCCCcceE
Q psy2113 67 ITSSWDHTLKIWDAELGGMKKGAIVKSTFSS---H---KEWVQSVRWSPIDPQLFVSASFD---NSVKLWDLRSPKVPLF 137 (183)
Q Consensus 67 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~p~~~~~l~~~~~d---g~i~vwd~~~~~~~~~ 137 (183)
++++.|+.|++||+++.+. ...+.. | ...|.+++|+| ++.++++++.| +.|++||+++++. +.
T Consensus 201 ~~~~~dg~i~i~d~~~~~~------~~~~~~~~~h~~~~~~i~~i~~~~-~~~~l~~~~~d~~~g~i~i~d~~~~~~-~~ 272 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRP------LYNFESQHSMINNSNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGER-IG 272 (397)
T ss_dssp EEECTTSEEEEEETTTTEE------EEEEECCC---CCCCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCE-EE
T ss_pred EEEeCCCcEEEEECCCCce------eEEEeccccccccCCccceEEECC-CCCEEEEEecCCCCceEEEEECCCCcc-cc
Confidence 8899999999999987654 566777 8 99999999999 88999999999 9999999998876 77
Q ss_pred Eecc-------------CCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 138 DMLG-------------HEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 138 ~~~~-------------~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+.. |...|.+++|+|+ .+|++++.||.|++||+++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 273 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 325 (397)
T ss_dssp EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCce
Confidence 7777 9999999999965 8999999999999999987653
No 79
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.9e-22 Score=145.85 Aligned_cols=159 Identities=18% Similarity=0.303 Sum_probs=130.3
Q ss_pred eceeEEEEEeec-CcEEEEEE----eccCCCCcccccccCccceEEEecc------CCCeeEEEEccCC--eEEEEeCCC
Q psy2113 7 GILTLGVIFMTV-GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGH------KEAISAVQWTAVD--EIITSSWDH 73 (183)
Q Consensus 7 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~~~~--~l~s~~~d~ 73 (183)
...+.+++|+|+ +..++++. +.+|++ ...+.+..+..| ...|.+++|+|++ .+++++.|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 237 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDL-------KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 237 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEET-------TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEEC-------CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC
Confidence 345678999999 67777654 666643 345566677666 7899999999885 488999998
Q ss_pred ---eEEEEEcCCCCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEE
Q psy2113 74 ---TLKIWDAELGGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV 149 (183)
Q Consensus 74 ---~v~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 149 (183)
.|++||++..... ...+. +|...|.+++|+|.++.++++++.|+.|++||+++++. +..+..|...|.++
T Consensus 238 ~~~~i~~~d~~~~~~~-----~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~-~~~~~~~~~~v~~~ 311 (416)
T 2pm9_A 238 NDPSILIWDLRNANTP-----LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ-LSQFPARGNWCFKT 311 (416)
T ss_dssp SSCCCCEEETTSTTSC-----SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE-EEEEECSSSCCCCE
T ss_pred CCceEEEEeCCCCCCC-----cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc-ceeecCCCCceEEE
Confidence 9999999875321 34566 79999999999996788999999999999999999876 78888999999999
Q ss_pred EecCC--cEEEEecCCCcEEEEEecCCCCCC
Q psy2113 150 NWSDY--RYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 150 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
+|+|+ .++++++.||.|++||++......
T Consensus 312 ~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 312 KFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp EECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred EECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 99965 699999999999999998876543
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=1e-21 Score=141.12 Aligned_cols=115 Identities=22% Similarity=0.374 Sum_probs=91.8
Q ss_pred eeceeEEEEEeec---CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEE
Q psy2113 6 FGILTLGVIFMTV---GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKI 77 (183)
Q Consensus 6 ~~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~v 77 (183)
..-.+.+++|+|+ |..++++. +.+|++.. ........+.+|.+.|.+++|+|++. |++++.|+.|++
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~i 112 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD-----SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKM 112 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT-----TSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC-----CCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEE
Confidence 3456788999999 58887765 66775421 12233367889999999999998865 899999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEE--ecCCCCEEEEEeCCCeEEEEeCCCCC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRW--SPIDPQLFVSASFDNSVKLWDLRSPK 133 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~p~~~~~l~~~~~dg~i~vwd~~~~~ 133 (183)
||+++... ..+..|...|.+++| +| ++.++++++.||.|++||+++++
T Consensus 113 wd~~~~~~-------~~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 113 WDLSSNQA-------IQIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EETTTTEE-------EEEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSS
T ss_pred EEcCCCCc-------eeeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCc
Confidence 99987653 345679999999999 77 78899999999999999998764
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=2.4e-21 Score=140.99 Aligned_cols=162 Identities=19% Similarity=0.333 Sum_probs=122.5
Q ss_pred eeEEEEEeecCc---EEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe--EEEEeCCCeEEEEE
Q psy2113 9 LTLGVIFMTVGA---LLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWD 79 (183)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~~~d~~v~vwd 79 (183)
...++.+++.+. .++++. +.+|+ ....+.+..+.+|.+.|.+++|+|++. +++++.|+.|++||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d 215 (408)
T 4a11_B 143 TVYSHHMSPVSTKHCLVAVGTRGPKVQLCD-------LKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWD 215 (408)
T ss_dssp CEEEEEECSSCSSCCEEEEEESSSSEEEEE-------SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred ceeeeEeecCCCCCcEEEEEcCCCeEEEEe-------CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEE
Confidence 456677777554 666654 55553 345567788899999999999998864 78999999999999
Q ss_pred cCCCCCcc----------CceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc---------------
Q psy2113 80 AELGGMKK----------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--------------- 134 (183)
Q Consensus 80 ~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~--------------- 134 (183)
++...... ..........|...|.+++|+| ++.++++++.||.|++||+++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 294 (408)
T 4a11_B 216 VRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKG 294 (408)
T ss_dssp TTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSC
T ss_pred CCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCccceecccccccccccc
Confidence 98654210 0000112256889999999999 889999999999999999986542
Q ss_pred -------------------------------ceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCCCC
Q psy2113 135 -------------------------------PLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 135 -------------------------------~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
++..+.+|...|++++|+|+ .+|++++.||.|++||+++.+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 295 LKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp CCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred ceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 24455779999999999976 899999999999999999887654
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.90 E-value=8.8e-22 Score=141.91 Aligned_cols=160 Identities=16% Similarity=0.148 Sum_probs=125.2
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+|++..++++. +.+|++. .........+..|...|.+++|+|++. +++++.|+.+++||++.
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLK-----GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEE-----TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECC-----CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 4567889999999988866 5556431 111122344467999999999998765 88999999999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCC------------------CCCcceEEeccCCC
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR------------------SPKVPLFDMLGHED 144 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~------------------~~~~~~~~~~~~~~ 144 (183)
..... ........|...|.+++|+| ++.++++++.||.|++||++ .++. ...+..|..
T Consensus 128 ~~~~~--~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 203 (372)
T 1k8k_C 128 ENDWW--VCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL-MFESSSSCG 203 (372)
T ss_dssp TTTEE--EEEEECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE-EEECCCCSS
T ss_pred CCcce--eeeeeecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhh-eEecCCCCC
Confidence 65210 11223356889999999999 88999999999999999964 3333 677779999
Q ss_pred cEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 145 KVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 145 ~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.|.+++|+|+ .+|++++.||.|++||+++++.
T Consensus 204 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 204 WVHGVCFSANGSRVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTE
T ss_pred eEEEEEECCCCCEEEEEeCCCEEEEEECCCCce
Confidence 9999999966 7999999999999999987654
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4e-21 Score=138.01 Aligned_cols=152 Identities=15% Similarity=0.125 Sum_probs=129.0
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~ 83 (183)
...+++|+|++..++++. +.+|++. .....+..+..|...|.+++|+|++. |++++.|+.|++||+++.
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVS------NNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETT------TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECC------CCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 567889999999988865 5566432 12567788889999999999998876 889999999999999877
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC--------------eEEEEeCCCCCcceEEeccCCCcEEEE
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN--------------SVKLWDLRSPKVPLFDMLGHEDKVMCV 149 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--------------~i~vwd~~~~~~~~~~~~~~~~~v~~~ 149 (183)
+. ...+. +...+.+++|+| ++.++++++.++ .+++||..+++. ...+.+|...|+++
T Consensus 251 ~~------~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~v~~~ 321 (369)
T 3zwl_B 251 QV------LKKYE-TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE-IGRVQGHFGPLNTV 321 (369)
T ss_dssp CE------EEEEE-CSSCEEEEEECS-SSSEEEEEECCC-------------CEEEEEETTTCCE-EEEEECCSSCEEEE
T ss_pred ce------eeeec-CCCCceeEEecC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc-hhheecccCcEEEE
Confidence 64 33444 788899999999 888999999888 899999999876 77889999999999
Q ss_pred EecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 150 NWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 150 ~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+|+|+ .+|++++.||.|++|+++.+.
T Consensus 322 ~~s~~~~~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 322 AISPQGTSYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEEECHHH
T ss_pred EECCCCCEEEEEcCCCeEEEEECcccc
Confidence 99966 899999999999999998653
No 84
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.89 E-value=6.4e-22 Score=142.14 Aligned_cols=132 Identities=20% Similarity=0.446 Sum_probs=112.0
Q ss_pred ccCccceEEEeccCCCeeEEEEccC----CeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCE
Q psy2113 39 ILQKTPLITLKGHKEAISAVQWTAV----DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQL 114 (183)
Q Consensus 39 ~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 114 (183)
....+.+..+.+|.+.|++++|+|+ ..|++|+.|+.|++||+.+... .....+.+|...|.+++|+| ++++
T Consensus 26 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~h~~~v~~~~~~~-~~~~ 100 (368)
T 3mmy_A 26 HNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ----TIPKAQQMHTGPVLDVCWSD-DGSK 100 (368)
T ss_dssp SCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC----EEEEEEEECSSCEEEEEECT-TSSE
T ss_pred CCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc----eeEEEeccccCCEEEEEECc-CCCE
Confidence 3455667788999999999999987 3489999999999999986332 11356788999999999999 8899
Q ss_pred EEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEe--cCC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 115 FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW--SDY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 115 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
|++++.||.|++||+++++. .....|...|.+++| +++ .++++++.||.|++||+++++..
T Consensus 101 l~s~~~dg~v~iwd~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 101 VFTASCDKTAKMWDLSSNQA--IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPM 164 (368)
T ss_dssp EEEEETTSEEEEEETTTTEE--EEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCS
T ss_pred EEEEcCCCcEEEEEcCCCCc--eeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEE
Confidence 99999999999999998774 456789999999999 655 78999999999999999987644
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.1e-22 Score=148.51 Aligned_cols=154 Identities=12% Similarity=0.228 Sum_probs=122.0
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEec--cCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKG--HKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
+....+++++..++++. +.+|+ ....+.+..+.+ |.+.|.+++|+|++. |++|+.|+.|++||++.
T Consensus 173 ~~~~~~~~~~~~l~~~~~d~~i~iwd-------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 173 RMRAFVNEEKSLLVALTNLSRVIIFD-------IRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp EEEEEECSSCEEEEEEETTSEEEEEE-------TTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEe-------CCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 33444667888888766 66664 445677788888 899999999998866 88999999999999987
Q ss_pred CCCccCceeEEEee-cCCcceEEEEEecC---CCCEEEEEeCCCeEEEEeCCCCCcceEEecc-----------------
Q psy2113 83 GGMKKGAIVKSTFS-SHKEWVQSVRWSPI---DPQLFVSASFDNSVKLWDLRSPKVPLFDMLG----------------- 141 (183)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~v~~~~~~p~---~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----------------- 141 (183)
... ...+. .|...|.+++|+|. ++.++++|+.||.|++||+++++. ...+.+
T Consensus 246 ~~~------~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 318 (437)
T 3gre_A 246 NVL------IRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC-QYAFINSDEQPSMEHFLPIEKGL 318 (437)
T ss_dssp TEE------EEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE-EEEEESSSSCCCGGGGSCBCSSG
T ss_pred ccE------EEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE-EEEEEcCCCCCccceeccccccc
Confidence 654 44554 67889999977652 567999999999999999998764 333332
Q ss_pred ---------CCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 142 ---------HEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 142 ---------~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
|...|++++|+++.+|++++.||.|++||+++++..
T Consensus 319 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 319 EELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp GGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred ccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcccc
Confidence 566788999997789999999999999999887644
No 86
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.6e-21 Score=139.93 Aligned_cols=154 Identities=15% Similarity=0.136 Sum_probs=115.2
Q ss_pred ceeEEEEEee--cCcEEEEEE----eccCCCCcccccccCccceEEEe-ccCCCeeEEEEccCCe-EEEEeCCCeEEEEE
Q psy2113 8 ILTLGVIFMT--VGALLTLTN----IEVTSLPSFFQLILQKTPLITLK-GHKEAISAVQWTAVDE-IITSSWDHTLKIWD 79 (183)
Q Consensus 8 ~~~~~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd 79 (183)
..+.+++|+| ++..++.+. +.+|++ ...+.+.... .|...|.+++|+|++. |++|+.|+.|++||
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~-------~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSY-------EDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEES-------SSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEEC-------CCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 3477899999 999888765 666754 3444444443 3556899999999876 77889999999999
Q ss_pred cCCCCCccCceeEEEeec-CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc---CCCcE--EEEEecC
Q psy2113 80 AELGGMKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG---HEDKV--MCVNWSD 153 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~v--~~~~~~~ 153 (183)
+++++.. ...+.. |...|.+++|+| ++.++++++ |+.|++||+++.+. ...+.. |...+ .+++|+|
T Consensus 199 ~~~~~~~-----~~~~~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 270 (343)
T 3lrv_A 199 LSSPDQA-----SSRFPVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVG-TLAYPTYTIPEFKTGTVTYDIDD 270 (343)
T ss_dssp SSCTTSC-----CEECCCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTT-CBSSCCCBC-----CCEEEEECT
T ss_pred CCCCCCC-----ccEEeccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCc-ceeecccccccccccceEEEECC
Confidence 9987652 145666 999999999999 889999999 55999999998765 333322 33344 3699996
Q ss_pred C-cEEEEecC-CCcEEEEEecCCCC
Q psy2113 154 Y-RYIMSGGQ-DNSVRVFKTKHQPK 176 (183)
Q Consensus 154 ~-~~l~~~~~-dg~i~iwd~~~~~~ 176 (183)
+ .+|++++. |+.|++|++....+
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCEEEEecCCCCcEEEEEEccccc
Confidence 5 88999888 99999999976654
No 87
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.6e-22 Score=148.99 Aligned_cols=116 Identities=13% Similarity=0.202 Sum_probs=98.2
Q ss_pred ccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCc-----ceEEEEEecCCCCEEEEEeCCCe
Q psy2113 50 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE-----WVQSVRWSPIDPQLFVSASFDNS 123 (183)
Q Consensus 50 ~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~~l~~~~~dg~ 123 (183)
.|.+.|.+++|+|+|. |++++.||.|++||... ....+. |.. .+.+++|+| ++++|++|+.||.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--------~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGt 152 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--------MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGE 152 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--------EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--------eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCE
Confidence 4578899999999987 99999999999999543 244455 555 599999999 8999999999999
Q ss_pred EEEEeCCCCCc------ceEEe----ccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 124 VKLWDLRSPKV------PLFDM----LGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 124 i~vwd~~~~~~------~~~~~----~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|++||+.++.. .+..+ .+|.+.|.+++|+|+. +++++.|+.|++||+..+..
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSS
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCcc
Confidence 99999998752 24554 6788899999999888 99999999999999987763
No 88
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.89 E-value=3.8e-21 Score=139.96 Aligned_cols=171 Identities=23% Similarity=0.369 Sum_probs=125.7
Q ss_pred eeceeEEEEEee-cCcEEEEEE----eccCCCCccccccc-CccceEEE-----eccCCCeeEEEEcc-CC-eEEEEeCC
Q psy2113 6 FGILTLGVIFMT-VGALLTLTN----IEVTSLPSFFQLIL-QKTPLITL-----KGHKEAISAVQWTA-VD-EIITSSWD 72 (183)
Q Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~-----~~h~~~v~~~~~~~-~~-~l~s~~~d 72 (183)
..-.+.+++|+| ++..++++. +.+|++........ ........ .+|...|.+++|+| ++ .|++++.|
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 345677889999 999988876 77776543211000 00000001 25999999999998 44 48999999
Q ss_pred CeEEEEEcCCCCCc--------------------------------------cCceeEEEeecCCcceEEEEEecCCCC-
Q psy2113 73 HTLKIWDAELGGMK--------------------------------------KGAIVKSTFSSHKEWVQSVRWSPIDPQ- 113 (183)
Q Consensus 73 ~~v~vwd~~~~~~~--------------------------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~- 113 (183)
+.|++||+++.+.. ........+..|...|.+++|+| ++.
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 200 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP-RYDY 200 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS-SCTT
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC-CCCc
Confidence 99999998764321 01122335567889999999999 555
Q ss_pred EEEEEeCCCeEEEEeCCCCCcceEEe---------------ccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 114 LFVSASFDNSVKLWDLRSPKVPLFDM---------------LGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 114 ~l~~~~~dg~i~vwd~~~~~~~~~~~---------------~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
++++++.||.|++||+++...+...+ ..|...|.+++|+|+ .+|++++.||.|++||+++++..
T Consensus 201 ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 201 ILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp EEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred EEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 79999999999999998876434444 578899999999976 89999999999999999987643
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=8.6e-22 Score=141.16 Aligned_cols=158 Identities=18% Similarity=0.256 Sum_probs=119.6
Q ss_pred eeEEEE----EeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc---CC-eEEEEeCCCeEE
Q psy2113 9 LTLGVI----FMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA---VD-EIITSSWDHTLK 76 (183)
Q Consensus 9 ~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~-~l~s~~~d~~v~ 76 (183)
.+.+++ |+|++..++++. +.+|++. ..+. .....|...|.+++|+| ++ .+++++.|+.|+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLR-------NMAL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETT-------TTEE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECc-------cCce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 344555 788999988875 6666543 2333 34467899999999998 54 489999999999
Q ss_pred EEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCC-EEEEEeCCCeEEEEeCCCCCc------------------ceE
Q psy2113 77 IWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDNSVKLWDLRSPKV------------------PLF 137 (183)
Q Consensus 77 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~i~vwd~~~~~~------------------~~~ 137 (183)
+||+++........ ...+.+|...|.+++|+| ++. ++++++.||.|++||+++... .+.
T Consensus 238 i~d~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~ 315 (357)
T 3i2n_A 238 VFDMRTQHPTKGFA-SVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQ 315 (357)
T ss_dssp EEEEEEEETTTEEE-EEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEE
T ss_pred EEeCcCCCccccee-eeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceee
Confidence 99998755422111 123458999999999999 666 899999999999999986542 256
Q ss_pred EeccCCCcEEEEEecCC-cEEE-EecCCCcEEEEEecCCCC
Q psy2113 138 DMLGHEDKVMCVNWSDY-RYIM-SGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 138 ~~~~~~~~v~~~~~~~~-~~l~-~~~~dg~i~iwd~~~~~~ 176 (183)
.+.+|...|++++|+|+ .+++ +++.||.|++||+.+.+.
T Consensus 316 ~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 316 NVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 67889999999999976 6776 899999999999987653
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=1.6e-21 Score=142.61 Aligned_cols=157 Identities=20% Similarity=0.381 Sum_probs=123.5
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe--EEEEe--CCCeEEEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE--IITSS--WDHTLKIW 78 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~~--~d~~v~vw 78 (183)
...+.+++|+|++..++++. +.+|++ ...+++..+..|...|.+++|+|++. +++++ .|+.|++|
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~-------~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~ 289 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDA-------RSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFW 289 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET-------TCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccC-------CCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEE
Confidence 34567889999999988876 666643 45667788889999999999998653 55654 79999999
Q ss_pred EcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEE--EeCCCeEEEEeCCCCCc-ceEEeccCCCcEEEEEecCC-
Q psy2113 79 DAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLWDLRSPKV-PLFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~--~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~- 154 (183)
|+++++. ...+ .+...|.+++|+| ++..+++ |+.||.|++||++++.. ....+.+|...|.+++|+|+
T Consensus 290 d~~~~~~------~~~~-~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 290 NAATGAR------VNTV-DAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG 361 (401)
T ss_dssp ETTTCCE------EEEE-ECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS
T ss_pred ECCCCCE------EEEE-eCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC
Confidence 9987764 4344 3677899999999 7888888 44899999999998643 13446789999999999965
Q ss_pred cEEEEecCCCcEEEEEecCCCCCC
Q psy2113 155 RYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
.+|++++.||.|++||+.+++...
T Consensus 362 ~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 362 RILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp SEEEEECTTSEEEEEECCC-----
T ss_pred CEEEEEeCCCcEEEEECCCCcccc
Confidence 899999999999999999877554
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.4e-21 Score=142.82 Aligned_cols=155 Identities=14% Similarity=0.245 Sum_probs=130.0
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCC---------------eeEEEEccCCeEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEA---------------ISAVQWTAVDEII 67 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~l~ 67 (183)
...+.+++|+|++..++++. +.+|++ ...+.+..+..+... +.++.|++++.++
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (425)
T 1r5m_A 149 RAPIVSVKWNKDGTHIISMDVENVTILWNV-------ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFV 221 (425)
T ss_dssp CSCEEEEEECTTSSEEEEEETTCCEEEEET-------TTTEEEEEECCC---------------CCCBSCCEEEETTEEE
T ss_pred CccEEEEEECCCCCEEEEEecCCeEEEEEC-------CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEE
Confidence 34577889999999888765 555643 455666677777666 9999999999999
Q ss_pred EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEE
Q psy2113 68 TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM 147 (183)
Q Consensus 68 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 147 (183)
+++.++.|++||++.... ...+..|...|.+++|+| ++.++++++.|+.|++||+++.+. ...+..|...|.
T Consensus 222 ~~~~~g~i~~~d~~~~~~------~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~i~ 293 (425)
T 1r5m_A 222 IPGPKGAIFVYQITEKTP------TGKLIGHHGPISVLEFND-TNKLLLSASDDGTLRIWHGGNGNS-QNCFYGHSQSIV 293 (425)
T ss_dssp EECGGGCEEEEETTCSSC------SEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEECSSSBSC-SEEECCCSSCEE
T ss_pred EEcCCCeEEEEEcCCCce------eeeeccCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCcc-ceEecCCCccEE
Confidence 999999999999987665 456778999999999999 888999999999999999998876 777888999999
Q ss_pred EEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 148 CVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 148 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+++|+|+..+++++.||.|++||+++++.
T Consensus 294 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 294 SASWVGDDKVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp EEEEETTTEEEEEETTSEEEEEETTTTEE
T ss_pred EEEECCCCEEEEEeCCCcEEEEECCCCcE
Confidence 99999766999999999999999987643
No 92
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.8e-22 Score=144.53 Aligned_cols=163 Identities=18% Similarity=0.329 Sum_probs=126.7
Q ss_pred ceeEEEEEeec-CcEEEEEE----eccCCCCccccccc--CccceEEEeccCCCeeEEEEccC-C-eEEEEeCCCeEEEE
Q psy2113 8 ILTLGVIFMTV-GALLTLTN----IEVTSLPSFFQLIL--QKTPLITLKGHKEAISAVQWTAV-D-EIITSSWDHTLKIW 78 (183)
Q Consensus 8 ~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~~~d~~v~vw 78 (183)
..+.+++|+|+ +.+++++. +.+|++........ .......+..|...|.+++|+|+ + .+++++.|+.|++|
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence 35678899998 77777764 77787653220000 11122234679999999999987 3 48899999999999
Q ss_pred EcCCCCCccCceeEEEeecC------CcceEEEEEecCCCCEEEEEeCCC---eEEEEeCCCCCcceEEec-cCCCcEEE
Q psy2113 79 DAELGGMKKGAIVKSTFSSH------KEWVQSVRWSPIDPQLFVSASFDN---SVKLWDLRSPKVPLFDML-GHEDKVMC 148 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~p~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~-~~~~~v~~ 148 (183)
|+++.+. ...+..+ ...+.+++|+|++..++++++.|+ .|++||+++...+...+. +|...|.+
T Consensus 194 d~~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 267 (416)
T 2pm9_A 194 DLKAKKE------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILS 267 (416)
T ss_dssp ETTTTEE------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEE
T ss_pred ECCCCCc------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeE
Confidence 9987654 4455544 788999999994457999999998 999999998755567777 89999999
Q ss_pred EEecC-C-cEEEEecCCCcEEEEEecCCCC
Q psy2113 149 VNWSD-Y-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 149 ~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++|+| + .+|++++.||.|++||+++++.
T Consensus 268 ~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 268 LDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp EEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred EEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 99997 4 8999999999999999987654
No 93
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=2.9e-21 Score=136.77 Aligned_cols=144 Identities=12% Similarity=0.111 Sum_probs=104.6
Q ss_pred EEEEee---cCcEEEEEE----eccCCCCcccccccCccceEEEeccC---CCeeEEEEccCCeE-------------EE
Q psy2113 12 GVIFMT---VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHK---EAISAVQWTAVDEI-------------IT 68 (183)
Q Consensus 12 ~~~~~~---~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~~~~~l-------------~s 68 (183)
.++|++ ++..++.+. +++| +..+++.+.++.+|. ..+.+++|+|++.+ ++
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIW-------Dl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laS 255 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIW-------NLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESL 255 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEE-------ETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC----------
T ss_pred eEEeeccCCCCceEEEecCCCcEEEE-------ECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeec
Confidence 445555 456666544 7777 455778888888754 36777899998873 56
Q ss_pred EeCCCeEEEEEcCCCCCccCceeEEEe-----ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCC
Q psy2113 69 SSWDHTLKIWDAELGGMKKGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHE 143 (183)
Q Consensus 69 ~~~d~~v~vwd~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 143 (183)
|+.|+++++||..+++. ...+ .+|...+.+..+ ++.++++|+.|++|++||+.+++. +..+.+|.
T Consensus 256 Gs~D~tIklWd~~tgk~------l~v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~-l~tL~gH~ 325 (356)
T 2w18_A 256 RSPVFQLIVINPKTTLS------VGVMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQC-TALLPPVS 325 (356)
T ss_dssp --CCEEEEEEETTTTEE------EEEEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSE-EEEECCC-
T ss_pred cCCCcEEEEEECCCCEE------EEEEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcE-EEEecCCC
Confidence 88999999999987664 2222 356555544443 367899999999999999999987 78888888
Q ss_pred CcEE-EEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 144 DKVM-CVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 144 ~~v~-~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
..+. .++|+|+ ++|++|+.|++|+|||+.
T Consensus 326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp -CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 7665 5899976 899999999999999963
No 94
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=1.1e-22 Score=148.53 Aligned_cols=154 Identities=14% Similarity=0.140 Sum_probs=109.4
Q ss_pred EeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc--------CCe-EEEEeCCCeEEEEEcC
Q psy2113 15 FMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA--------VDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 15 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~-l~s~~~d~~v~vwd~~ 81 (183)
+.+++.+++.+. +++|+.... .......+..+.+|.+.|++++|+| +++ |++|+.|++|+|||++
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~--~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNE--TIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLT 174 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETT--EEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCC--ccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECC
Confidence 444555566554 666643211 0111123344678999999999986 444 8999999999999997
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcce------------------------E
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL------------------------F 137 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~------------------------~ 137 (183)
+... ...+..|...+.+++|+|++..++++++.|+.|++||+++++... .
T Consensus 175 ~~~~------~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 248 (393)
T 4gq1_A 175 DEGP------ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTC 248 (393)
T ss_dssp TTEE------EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC---
T ss_pred CCce------eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeee
Confidence 6654 456678999999999999555689999999999999998775311 1
Q ss_pred EeccCCCcEEEEEec-C-CcEEEEecCCCcEEEEEecCCCC
Q psy2113 138 DMLGHEDKVMCVNWS-D-YRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 138 ~~~~~~~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
...+|...+.++.|. + +..+++++.|+.+++||+...+.
T Consensus 249 ~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~ 289 (393)
T 4gq1_A 249 HSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND 289 (393)
T ss_dssp ---CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----
T ss_pred ecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC
Confidence 124677888999997 4 48999999999999999987654
No 95
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=156.25 Aligned_cols=158 Identities=15% Similarity=0.159 Sum_probs=122.3
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL 82 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~ 82 (183)
..+.+++|+| +.+++.+. +++|++ ...+.+..+. |.+.|++++|+|++. +++|+.||.|++||+++
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~-------~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSL-------YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEET-------TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEEC-------CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC
Confidence 3577899999 77666554 777854 3455666665 778999999998866 88999999999999987
Q ss_pred CCCccCcee----E-EEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccC---------------
Q psy2113 83 GGMKKGAIV----K-STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGH--------------- 142 (183)
Q Consensus 83 ~~~~~~~~~----~-~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------------- 142 (183)
......... . ..+.+|.+.|.+++|+|+++..+++|+.||.| +||+++.+. ...+..|
T Consensus 130 ~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~-~~~~~~~~~~g~~~~~~~~~~~ 207 (902)
T 2oaj_A 130 DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI-KQSFIYELPPFAPGGDFSEKTN 207 (902)
T ss_dssp TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE-EEEECCCBCTTCCCSTTCCCTT
T ss_pred CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce-EEEEecccCCcCCCcccccccc
Confidence 653100000 0 12367889999999999556789999999999 999998765 5555544
Q ss_pred ---CCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 143 ---EDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 143 ---~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
...|++++|+|+ .+|++++.||.|++||+++++.
T Consensus 208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~ 245 (902)
T 2oaj_A 208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHM 245 (902)
T ss_dssp SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCE
T ss_pred cccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcE
Confidence 578999999976 8999999999999999987653
No 96
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=9.6e-21 Score=136.61 Aligned_cols=106 Identities=13% Similarity=0.212 Sum_probs=83.6
Q ss_pred EeCCCeEEEEEcCCCCCc---------cCcee-EEEeecCCcceEEEEEecCCCCEEEEEeCCCe-EEEEeCCCCCcceE
Q psy2113 69 SSWDHTLKIWDAELGGMK---------KGAIV-KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS-VKLWDLRSPKVPLF 137 (183)
Q Consensus 69 ~~~d~~v~vwd~~~~~~~---------~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~-i~vwd~~~~~~~~~ 137 (183)
|+.+|.|++||+.+.... ....+ ...+.+|...|.+++|+| ++.+|++|+.|++ |++||+++++. +.
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~v~iwd~~~~~~-~~ 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTIIRVFKTEDGVL-VR 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSEEEEEETTTCCE-EE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCEEEEEECCCCcE-EE
Confidence 456677777776653310 00011 456789999999999999 8999999999998 99999999886 66
Q ss_pred Eec-c-CCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 138 DML-G-HEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 138 ~~~-~-~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+. + |...|++++|+|+ .+|++++.|++|++||++....
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~ 274 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQD 274 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSC
T ss_pred EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCC
Confidence 666 5 9999999999975 8999999999999999987643
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=4.9e-21 Score=137.20 Aligned_cols=157 Identities=18% Similarity=0.319 Sum_probs=121.3
Q ss_pred eeceeEEEEEeecCc-EEEEE-----E--eccCCCCcccccccCccce-EEEeccCCCeeEEEEccC----CeEEEEeCC
Q psy2113 6 FGILTLGVIFMTVGA-LLTLT-----N--IEVTSLPSFFQLILQKTPL-ITLKGHKEAISAVQWTAV----DEIITSSWD 72 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~~~-----~--~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~----~~l~s~~~d 72 (183)
..-.+.+++|+|++. +++++ + +.+|++. ..+.. ....+|...|.+++|+|+ ..+++++.|
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQ-------HGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEEC-------SSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCC-------CCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 344678899999995 44444 2 6666432 33222 223379999999999987 459999999
Q ss_pred CeEEEEEcCCCC-CccCceeEEEeecCCcceEEEEE------ecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCC-
Q psy2113 73 HTLKIWDAELGG-MKKGAIVKSTFSSHKEWVQSVRW------SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHED- 144 (183)
Q Consensus 73 ~~v~vwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~------~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~- 144 (183)
+.|++||+.+.+ . ...+.+|...|.++.| +| +++++++++.||.|++||+++...+...+..|..
T Consensus 90 g~i~iwd~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 162 (357)
T 3i2n_A 90 GNLHIWNLEAPEMP------VYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE 162 (357)
T ss_dssp SCEEEECTTSCSSC------SEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS
T ss_pred CeEEEEeCCCCCcc------EEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC
Confidence 999999998766 3 5567889999999965 67 7889999999999999999988755677766554
Q ss_pred ---cEEEEE----ecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 145 ---KVMCVN----WSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 145 ---~v~~~~----~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+.+++ |+++ .++++++.||.|++||+++++.
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL 202 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce
Confidence 889998 5544 8999999999999999988654
No 98
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=2.2e-21 Score=138.22 Aligned_cols=133 Identities=29% Similarity=0.440 Sum_probs=112.0
Q ss_pred cCccceEEEeccCCCeeEEEEccC-C-eEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEE
Q psy2113 40 LQKTPLITLKGHKEAISAVQWTAV-D-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS 117 (183)
Q Consensus 40 ~~~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~ 117 (183)
++.....+|++|.+.|++|+|+|+ + .|++|+.|++|+|||+...+. ....+...+.+|...|.+++|+| +++++++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~-~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s 103 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDET-NYGIPQRALRGHSHFVSDVVISS-DGQFALS 103 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSS-CSEEEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc-ccceeeEEEeCCCCCEEEEEECC-CCCEEEE
Confidence 344556789999999999999986 3 488999999999999987553 22334567889999999999999 8999999
Q ss_pred EeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 118 ASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 118 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
++.|+.|++|+...... ......+...+..+.+.+. .++++++.|+.+++||+....
T Consensus 104 ~~~d~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~ 161 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTT-TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC 161 (340)
T ss_dssp EETTSEEEEEETTTTEE-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE
T ss_pred EcccccceEEeecccce-eeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCc
Confidence 99999999999998765 6667778888888888855 899999999999999987543
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=9.4e-21 Score=144.65 Aligned_cols=153 Identities=16% Similarity=0.246 Sum_probs=129.5
Q ss_pred eceeEEEEEeecCcEEEEEE--------eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCCCeEE
Q psy2113 7 GILTLGVIFMTVGALLTLTN--------IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLK 76 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d~~v~ 76 (183)
.....+++|+|++..++++. +.+|+ ..+.+..+.+|...|.+++|+|++ .+++++.|+.|+
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d---------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~ 186 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWD---------SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 186 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCSEEEEETT---------TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEE
T ss_pred cccEEEEEEeCCCCEEEEeccCCCCccEEEEEE---------CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEE
Confidence 34567889999999988764 33332 445677889999999999999887 589999999999
Q ss_pred EEEcCCCCCccCceeEEEeecCCc---ceEEEEEecCC-CCEEEEEeCCCeEEEEeCCCCCcceEEe-c---cCCCcEEE
Q psy2113 77 IWDAELGGMKKGAIVKSTFSSHKE---WVQSVRWSPID-PQLFVSASFDNSVKLWDLRSPKVPLFDM-L---GHEDKVMC 148 (183)
Q Consensus 77 vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~---~~~~~v~~ 148 (183)
+||+.+.+. ...+.+|.. .|.+++|+| + ++++++++.||.|++||+++++. ...+ . .|...|.+
T Consensus 187 vwd~~~~~~------~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~v~~ 258 (615)
T 1pgu_A 187 FYQGPPFKF------SASDRTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEF-LKYIEDDQEPVQGGIFA 258 (615)
T ss_dssp EEETTTBEE------EEEECSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCE-EEECCBTTBCCCSCEEE
T ss_pred EEeCCCcce------eeeecccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCE-eEEecccccccCCceEE
Confidence 999877654 567788988 999999999 6 89999999999999999999876 5666 5 89999999
Q ss_pred EEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 149 VNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 149 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++|+++.++++++.||.|++||+++++.
T Consensus 259 ~~~~~~~~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 259 LSWLDSQKFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEESSSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEcCCCEEEEEcCCCcEEEEECCCCcE
Confidence 9999448999999999999999987643
No 100
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.2e-21 Score=144.41 Aligned_cols=161 Identities=9% Similarity=0.120 Sum_probs=120.9
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccc----cccCccceEEEe--c--cCCCeeEEEEc--cCCe-EEEEeC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQ----LILQKTPLITLK--G--HKEAISAVQWT--AVDE-IITSSW 71 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~--~--h~~~v~~~~~~--~~~~-l~s~~~ 71 (183)
...+.+++|+|++..++++. +++|++..... .......+..+. . +...+.++.+. +++. +++++.
T Consensus 111 ~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 111 SSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC
Confidence 44578899999999888765 77776531100 000111222222 1 45567777744 5554 899999
Q ss_pred CCeEEEEEcCCCCCccCceeEEEeec--CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec-cCCCcEEE
Q psy2113 72 DHTLKIWDAELGGMKKGAIVKSTFSS--HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMC 148 (183)
Q Consensus 72 d~~v~vwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~v~~ 148 (183)
|+.|++||+++.+. ...+.. |...|.+++|+| ++.++++|+.||.|++||+++++. +..+. .|...|.+
T Consensus 191 d~~i~iwd~~~~~~------~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 191 LSRVIIFDIRTLER------LQIIENSPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVL-IRSWSFGDHAPITH 262 (437)
T ss_dssp TSEEEEEETTTCCE------EEEEECCGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEE-EEEEBCTTCEEEEE
T ss_pred CCeEEEEeCCCCee------eEEEccCCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccE-EEEEecCCCCceEE
Confidence 99999999988765 556666 889999999999 899999999999999999998765 55554 78889999
Q ss_pred EEecC----C-cEEEEecCCCcEEEEEecCCC
Q psy2113 149 VNWSD----Y-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 149 ~~~~~----~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
++|+| + .++++++.||.|++||+++++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 97763 3 599999999999999998765
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.8e-21 Score=155.08 Aligned_cols=151 Identities=9% Similarity=0.123 Sum_probs=122.1
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 83 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 83 (183)
-.+.+++|+|++.+++++. +++|+.. ..+.... ..|...|.+++|+|+..|++++.|++|++||++++
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~-------~~~~~~~-~~~~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQ-------QVEVVIK-LEDRSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECST-------TCEEEEE-CSSCCCEEEEEEETTTEEEEEETTCEEEEEETTTC
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCC-------CcEEEEE-cCCCCCEEEEEEcCCCEEEEEECcCeEEEEECCCC
Confidence 3578899999999999876 7777543 2222233 34788999999999444999999999999999876
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcce----------EEeccCCCcEEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL----------FDMLGHEDKVMCVNWSD 153 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~----------~~~~~~~~~v~~~~~~~ 153 (183)
+. ...+. |...|++++|+| +++++++|+.||.|++||+++..... ....+|.+.|++++|+|
T Consensus 90 ~~------~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 90 KV------LTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp SE------EEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred cE------EEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 64 44454 678899999999 89999999999999999999875311 22367889999999998
Q ss_pred C--cEEEEecCCCcEEEEEecCCC
Q psy2113 154 Y--RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 154 ~--~~l~~~~~dg~i~iwd~~~~~ 175 (183)
. ..+++|+.||.| +||+++++
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~ 184 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENE 184 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTE
T ss_pred CCCCEEEEEeCCCcE-EEECCCCc
Confidence 5 689999999999 99998764
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.2e-21 Score=148.93 Aligned_cols=160 Identities=21% Similarity=0.327 Sum_probs=129.2
Q ss_pred eceeEEEEEeec--CcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccC--C-eEEEEeCCCeEEE
Q psy2113 7 GILTLGVIFMTV--GALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKI 77 (183)
Q Consensus 7 ~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~-~l~s~~~d~~v~v 77 (183)
.-.+.+++|+|+ +..++++. +.+|++.. .....+..+.+|...|.+++|+|+ + .+++|+.||.|++
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~-----~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-----GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET-----TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC-----CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 345678899988 88887766 66665321 122367788899999999999986 4 4899999999999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecC------------CCCEEEEEeCCCeEEEEeCCCCCc---ceEEeccC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI------------DPQLFVSASFDNSVKLWDLRSPKV---PLFDMLGH 142 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~------------~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~ 142 (183)
||++...... ...+.+|...|.+++|+|. ++.++++|+.||.|++||++++.. +...+.+|
T Consensus 128 wdl~~~~~~~----~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h 203 (753)
T 3jro_A 128 VEFKENGTTS----PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGH 203 (753)
T ss_dssp EECCSSSCCC----CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCC
T ss_pred EEeecCCCcc----eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCC
Confidence 9998764322 3456789999999999994 378999999999999999988752 24567889
Q ss_pred CCcEEEEEecCC----cEEEEecCCCcEEEEEecCCC
Q psy2113 143 EDKVMCVNWSDY----RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 143 ~~~v~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...|++++|+|+ .++++++.||.|++||++++.
T Consensus 204 ~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 204 SDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp SSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 999999999954 789999999999999999864
No 103
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.88 E-value=5.7e-21 Score=150.36 Aligned_cols=157 Identities=20% Similarity=0.387 Sum_probs=130.7
Q ss_pred eceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcC
Q psy2113 7 GILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE 81 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~ 81 (183)
...+.+++|+|++..++++. +.+|+ ...++.+..+.+|.+.|.+++|+|++. +++++.|+.|++||++
T Consensus 55 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 55 ETPVRAGKFIARKNWIIVGSDDFRIRVFN-------YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEE-------TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEEeCCCCEEEEEeCCCeEEEEE-------CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 34567899999999988876 66664 446677888999999999999998875 8999999999999997
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC--C-cEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD--Y-RYIM 158 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~l~ 158 (183)
++.. ....+.+|...|.+++|+|.++..+++++.||.|++||++++.........+...+..++|+| + .+++
T Consensus 128 ~~~~-----~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 202 (814)
T 3mkq_A 128 NNWA-----LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMI 202 (814)
T ss_dssp GTSE-----EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEE
T ss_pred CCce-----EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEE
Confidence 6532 255678899999999999966789999999999999999887763444444558999999996 4 8999
Q ss_pred EecCCCcEEEEEecCCC
Q psy2113 159 SGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~ 175 (183)
+++.||.|++||+++++
T Consensus 203 ~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 203 TASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EECTTSEEEEEETTTTE
T ss_pred EEeCCCEEEEEECCCCc
Confidence 99999999999988764
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=4.3e-21 Score=136.93 Aligned_cols=155 Identities=12% Similarity=0.117 Sum_probs=123.8
Q ss_pred eeceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe--EEEEeCCCeEEEEE
Q psy2113 6 FGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWD 79 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~~~d~~v~vwd 79 (183)
..-.+.+++|+|++..++++. +.+|++... ........+.+|...|.+++|+|++. |++++.|+.|++||
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQ----AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETT----TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCC----CccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 344678899999999888765 666654311 11123455668999999999998765 88999999999999
Q ss_pred c-CCCCCccCceeEEEeec--CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCC---------CCcceEEeccCCCcEE
Q psy2113 80 A-ELGGMKKGAIVKSTFSS--HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRS---------PKVPLFDMLGHEDKVM 147 (183)
Q Consensus 80 ~-~~~~~~~~~~~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~---------~~~~~~~~~~~~~~v~ 147 (183)
+ .... ...+.+ |...|.+++|+| +.++++++.|+.|++||+++ .+. +..+. |...|.
T Consensus 86 ~~~~~~-------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~-~~~~v~ 154 (342)
T 1yfq_A 86 LIGSPS-------FQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLN-SNNTK-VKNKIF 154 (342)
T ss_dssp SSSSSS-------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESC-SSSSS-SCCCEE
T ss_pred eccCCc-------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCe-eeEEe-eCCceE
Confidence 9 7654 356777 999999999999 67999999999999999987 553 33444 889999
Q ss_pred EEEecCCcEEEEecCCCcEEEEEecC-CCC
Q psy2113 148 CVNWSDYRYIMSGGQDNSVRVFKTKH-QPK 176 (183)
Q Consensus 148 ~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~ 176 (183)
+++|+++. +++++.|+.|++||+++ ...
T Consensus 155 ~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 155 TMDTNSSR-LIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp EEEECSSE-EEEEESTTEEEEEESSCCTTC
T ss_pred EEEecCCc-EEEEeCCCeEEEEECCccccc
Confidence 99999866 99999999999999998 443
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-20 Score=140.22 Aligned_cols=121 Identities=13% Similarity=0.133 Sum_probs=100.7
Q ss_pred ccCCCeeEEEEccCCe-E-EEEeCCCeEEEEEcC--CCCCccCceeEEEee--cCCcceEEEEEecCCCCEEEEEeCCCe
Q psy2113 50 GHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAE--LGGMKKGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNS 123 (183)
Q Consensus 50 ~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~--~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg~ 123 (183)
+|.+.|.+++|+|++. | ++++.|+.|++||+. ++.. ...+. .|...|.+++|+| ++.+|++|+.||.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~------~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~~g~ 172 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV------LKLRKRFCFSKRPNAISIAE-DDTTVIIADKFGD 172 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC------EEEEEEEECSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce------eeeeecccCCCCceEEEEcC-CCCEEEEEeCCCc
Confidence 4566899999999876 4 788899999999998 5544 33443 5778999999999 8899999999999
Q ss_pred EEEEeCCCCCc---ceEEeccCCCcEEEEEecC----CcEEEEecCCCcEEEEEecCCCCC
Q psy2113 124 VKLWDLRSPKV---PLFDMLGHEDKVMCVNWSD----YRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 124 i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+++|++.+... +...+.+|...|++++|+| +.+|++++.|+.|++||+++++..
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIV 233 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCE
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCcee
Confidence 99999987764 1236778999999999995 459999999999999999877543
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=6.2e-21 Score=145.63 Aligned_cols=160 Identities=14% Similarity=0.213 Sum_probs=124.7
Q ss_pred eeEEEEEeecCcEEEEEE---eccCCCCcccccccCc----cceEEEeccCCC-eeEEEEcc--CCe-EEEEeCCCeEEE
Q psy2113 9 LTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQK----TPLITLKGHKEA-ISAVQWTA--VDE-IITSSWDHTLKI 77 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~h~~~-v~~~~~~~--~~~-l~s~~~d~~v~v 77 (183)
.+.+++|+|++..++.+. +.+|++ ... +....+.+|.+. |.+++|+| ++. |++++.|+.|++
T Consensus 20 ~v~~~~~spdg~~l~~~~~~~v~v~~~-------~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCGKSAFVRCL-------DDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCCCEEETTTTEEEEEETTEEEEEEC-------CSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEC-------CCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 356788999999988876 555543 344 678889999999 99999999 876 889999999999
Q ss_pred EEcCCC--------CCcc--------------------------------------CceeEEEeecCCcceEEEEEecCC
Q psy2113 78 WDAELG--------GMKK--------------------------------------GAIVKSTFSSHKEWVQSVRWSPID 111 (183)
Q Consensus 78 wd~~~~--------~~~~--------------------------------------~~~~~~~~~~~~~~v~~~~~~p~~ 111 (183)
||+.++ .... .......+.+|...|.+++|+| +
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~-~ 171 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQ-S 171 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECS-S
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECC-C
Confidence 999633 1100 0011223345667778888888 4
Q ss_pred CC-EEEEEeCCCeEEEEeCCCCCcceEEeccCCC---cEEEEEecCC--cEEEEecCCCcEEEEEecCCCCC
Q psy2113 112 PQ-LFVSASFDNSVKLWDLRSPKVPLFDMLGHED---KVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 112 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+. .+++++.|+.|++||+++.+. ...+.+|.. .|.+++|+|+ .++++++.||.|++||+++++..
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred CCcEEEEEeCCCcEEEEeCCCcce-eeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 44 899999999999999998775 778888998 9999999954 78999999999999999877643
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=2e-20 Score=138.91 Aligned_cols=147 Identities=22% Similarity=0.334 Sum_probs=121.4
Q ss_pred eecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCcee
Q psy2113 16 MTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIV 91 (183)
Q Consensus 16 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 91 (183)
.+++..++++. +++|+ ....+.+..+.+|.+.|.+++|++++.+++|+.|++|++||+++++.
T Consensus 129 ~~~~~~l~sgs~dg~i~vwd-------~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~------ 195 (464)
T 3v7d_B 129 QFEDNYVITGADDKMIRVYD-------SINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCC------ 195 (464)
T ss_dssp EEETTEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEE------
T ss_pred EECCCEEEEEcCCCcEEEEE-------CCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcE------
Confidence 33566776655 77774 45667788899999999999999988999999999999999987764
Q ss_pred EEEeecCCcceEEEEEecC-CCCEEEEEeCCCeEEEEeCCCCCcc----------------------eEEeccCCCcEEE
Q psy2113 92 KSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSVKLWDLRSPKVP----------------------LFDMLGHEDKVMC 148 (183)
Q Consensus 92 ~~~~~~~~~~v~~~~~~p~-~~~~l~~~~~dg~i~vwd~~~~~~~----------------------~~~~~~~~~~v~~ 148 (183)
...+.+|...|.+++|+|. ++.++++|+.|+.|++||+++.... .....+|...|.+
T Consensus 196 ~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 275 (464)
T 3v7d_B 196 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 275 (464)
T ss_dssp EEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEE
T ss_pred EEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEE
Confidence 6678889999999999852 5689999999999999999976532 4467788899988
Q ss_pred EEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 149 VNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 149 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+... +.++++++.||.|++||+++++.
T Consensus 276 ~~~~-~~~l~~~~~d~~i~vwd~~~~~~ 302 (464)
T 3v7d_B 276 VSGH-GNIVVSGSYDNTLIVWDVAQMKC 302 (464)
T ss_dssp EEEE-TTEEEEEETTSCEEEEETTTTEE
T ss_pred EcCC-CCEEEEEeCCCeEEEEECCCCcE
Confidence 8544 47999999999999999987653
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.88 E-value=1.6e-20 Score=139.49 Aligned_cols=157 Identities=20% Similarity=0.361 Sum_probs=124.4
Q ss_pred eEEEEEe--ecCcEEEEEE----eccCCCCcccccc----------------cCccceEEEeccCCCeeEEEEccCCeEE
Q psy2113 10 TLGVIFM--TVGALLTLTN----IEVTSLPSFFQLI----------------LQKTPLITLKGHKEAISAVQWTAVDEII 67 (183)
Q Consensus 10 ~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~----------------~~~~~~~~~~~h~~~v~~~~~~~~~~l~ 67 (183)
+.+++|+ +++..++++. +.+|++....... .....+..+.+|...|.++.. .+..++
T Consensus 206 v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~ 284 (464)
T 3v7d_B 206 VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG-HGNIVV 284 (464)
T ss_dssp EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE-ETTEEE
T ss_pred cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC-CCCEEE
Confidence 3445555 5777777765 6667654321110 111136678889999988853 235699
Q ss_pred EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEE
Q psy2113 68 TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM 147 (183)
Q Consensus 68 s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 147 (183)
+++.|+.|++||+++.+. ...+.+|...|.+++|+| ++.++++|+.||.|++||+++++. +..+.+|...|.
T Consensus 285 ~~~~d~~i~vwd~~~~~~------~~~~~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~h~~~v~ 356 (464)
T 3v7d_B 285 SGSYDNTLIVWDVAQMKC------LYILSGHTDRIYSTIYDH-ERKRCISASMDTTIRIWDLENGEL-MYTLQGHTALVG 356 (464)
T ss_dssp EEETTSCEEEEETTTTEE------EEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEE
T ss_pred EEeCCCeEEEEECCCCcE------EEEecCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcE-EEEEeCCCCcEE
Confidence 999999999999987664 667888999999999999 889999999999999999999876 788899999999
Q ss_pred EEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 148 CVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 148 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++.|++ .++++++.||.|++||+++...
T Consensus 357 ~~~~~~-~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 357 LLRLSD-KFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EEEECS-SEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEcC-CEEEEEeCCCcEEEEECCCCce
Confidence 999984 7999999999999999987653
No 109
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.87 E-value=4.1e-21 Score=141.70 Aligned_cols=160 Identities=17% Similarity=0.261 Sum_probs=120.4
Q ss_pred eceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceE-------EEeccCCCeeEEEEccCC--eEEEEeCCCe
Q psy2113 7 GILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLI-------TLKGHKEAISAVQWTAVD--EIITSSWDHT 74 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~~~--~l~s~~~d~~ 74 (183)
...+.+++|+|++..++.+. +.+|++.. ....+. .+.+|...|.+++|+|++ .|++|+.|+.
T Consensus 177 ~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSADDLRINLWHLEI------TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SSCCCEEEECTTSSEEEEECSSEEEEEETTE------EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred CcceEEEEEcCCCCEEEEeCCCeEEEEECCC------CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 34567899999999888764 66665431 112222 256899999999999876 4899999999
Q ss_pred EEEEEcCCCCCccCceeEEEeecCCc------------ceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccC
Q psy2113 75 LKIWDAELGGMKKGAIVKSTFSSHKE------------WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGH 142 (183)
Q Consensus 75 v~vwd~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 142 (183)
|++||+++...... ....+..|.. .|.+++|+| ++.++++++. +.|++||+++...++..+.+|
T Consensus 251 i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~ 326 (447)
T 3dw8_B 251 IRLCDMRASALCDR--HSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVH 326 (447)
T ss_dssp EEEEETTTCSSSCT--TCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESC
T ss_pred EEEEECcCCccccc--eeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeecc
Confidence 99999987663111 1234556665 899999999 8999999998 999999999733336677777
Q ss_pred CCc---------------EEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 143 EDK---------------VMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 143 ~~~---------------v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
... +..++|+|+ .+|++|+.||.|++||+++++.
T Consensus 327 ~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 327 EYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp GGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred ccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 532 334899966 8999999999999999987653
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=2.8e-20 Score=136.86 Aligned_cols=150 Identities=21% Similarity=0.332 Sum_probs=123.4
Q ss_pred EEEEEeecCcEEEEEE---eccCCCCcccccccCccceEE--EeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCC
Q psy2113 11 LGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLIT--LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~ 84 (183)
.-++|++.+ +++++. +++|+. .+++.... +.+|...|++|+|+|++. |++|+.|+.|++||+++++
T Consensus 109 ~~l~wS~~n-~lAvgld~tV~lWd~-------~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 109 NLVDWSSGN-VLAVALDNSVYLWSA-------SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEET-------TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred eeEEECCCC-EEEEEeCCEEEEEEC-------CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 346788765 666654 777743 44444444 456788999999998876 8899999999999998876
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCC
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQD 163 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d 163 (183)
. ...+.+|...+.+++++ +.++++|+.|+.+++||.+.....+..+.+|...+..+.|.+. .++++++.|
T Consensus 181 ~------~~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D 251 (420)
T 4gga_A 181 R------LRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND 251 (420)
T ss_dssp E------EEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred E------EEEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc
Confidence 5 66788999999998885 4699999999999999999877767888999999999999965 899999999
Q ss_pred CcEEEEEecCCCCC
Q psy2113 164 NSVRVFKTKHQPKS 177 (183)
Q Consensus 164 g~i~iwd~~~~~~~ 177 (183)
+.+++||...++..
T Consensus 252 ~~v~i~~~~~~~~~ 265 (420)
T 4gga_A 252 NLVNVWPSAPGEGG 265 (420)
T ss_dssp SCEEEEESSCCSSC
T ss_pred ccceEEeecccccc
Confidence 99999999877543
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=4.2e-20 Score=136.40 Aligned_cols=144 Identities=27% Similarity=0.403 Sum_probs=120.9
Q ss_pred EeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCce
Q psy2113 15 FMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAI 90 (183)
Q Consensus 15 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 90 (183)
+.+++..++++. +.+|+ ..+.+.+..+.+|.+.|.+++| .++.+++|+.||.|++||+.+++.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd-------~~~~~~~~~~~~h~~~v~~l~~-~~~~l~sg~~dg~i~vwd~~~~~~----- 205 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWD-------KNTLECKRILTGHTGSVLCLQY-DERVIITGSSDSTVRVWDVNTGEM----- 205 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEE-------SSSCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEESSSCCE-----
T ss_pred EEECCCEEEEEeCCCeEEEEe-------CCCCeEEEEEcCCCCcEEEEEE-CCCEEEEEcCCCeEEEEECCCCcE-----
Confidence 344788887765 66664 4466778889999999999999 456799999999999999988765
Q ss_pred eEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcce--EEeccCCCcEEEEEecCCcEEEEecCCCcEEE
Q psy2113 91 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRV 168 (183)
Q Consensus 91 ~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~i 168 (183)
...+.+|...|.+++|++ ..+++|+.||.|++||++++.... ..+.+|...|.+++| ++.++++|+.||.|++
T Consensus 206 -~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 206 -LNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-DDKYIVSASGDRTIKV 280 (435)
T ss_dssp -EEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE-ETTEEEEEETTSEEEE
T ss_pred -EEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe-CCCEEEEEeCCCeEEE
Confidence 667888999999999965 499999999999999999876522 667899999999999 5589999999999999
Q ss_pred EEecCCCC
Q psy2113 169 FKTKHQPK 176 (183)
Q Consensus 169 wd~~~~~~ 176 (183)
||+++++.
T Consensus 281 wd~~~~~~ 288 (435)
T 1p22_A 281 WNTSTCEF 288 (435)
T ss_dssp EETTTCCE
T ss_pred EECCcCcE
Confidence 99987654
No 112
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.6e-21 Score=144.16 Aligned_cols=161 Identities=14% Similarity=0.190 Sum_probs=115.8
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccc---------cccCccceEEEeccCCCeeEEEEccCCe-EE----EEeCC
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQ---------LILQKTPLITLKGHKEAISAVQWTAVDE-II----TSSWD 72 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~----s~~~d 72 (183)
+..+++++.+.+++++. +.++....... ..........+ .+...|.+++|+|++. |+ +++.|
T Consensus 39 ~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~sgs~d 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMSSEYG 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEETTTE
T ss_pred ccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEeccCCC
Confidence 45567888888887766 33322111000 00001111222 3567899999998876 66 67889
Q ss_pred CeEEEEEcCCC-----CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEE
Q psy2113 73 HTLKIWDAELG-----GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM 147 (183)
Q Consensus 73 ~~v~vwd~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 147 (183)
+.|++||+++. +..........+.+|...|.+++|+|+++.++++++.||.|++||++++.. .....+|...|.
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~-~~~~~~~~~~v~ 196 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK-VCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE-EEEEECGGGCEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc-eeeccCCCCcee
Confidence 99999998654 111111223456679999999999995488999999999999999998754 555667889999
Q ss_pred EEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 148 CVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 148 ~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
+++|+|+ .+|++|+.||.|++||++
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 9999965 899999999999999988
No 113
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.87 E-value=3.9e-20 Score=136.84 Aligned_cols=143 Identities=29% Similarity=0.455 Sum_probs=120.9
Q ss_pred EEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCc
Q psy2113 14 IFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGA 89 (183)
Q Consensus 14 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~ 89 (183)
++.+++..++++. +++|+ ....+.+..+.+|.+.|.++.|+ ++.+++|+.|+.|++||+.+++.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd-------~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~---- 191 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWS-------AVTGKCLRTLVGHTGGVWSSQMR-DNIIISGSTDRTLKVWNAETGEC---- 191 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEE-------TTTCCEEEECCCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEE----
T ss_pred EEEEcCCEEEEEECCCcEEEEE-------CCCCcEEEEEcCCCCCEEEEEec-CCEEEEEeCCCeEEEEECCcCcE----
Confidence 3556788888766 66674 34667788899999999999997 56899999999999999987764
Q ss_pred eeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEE
Q psy2113 90 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVF 169 (183)
Q Consensus 90 ~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iw 169 (183)
...+.+|...|.++.+++ ..+++|+.||.|++||+++++. ...+.+|...|.+++| ++.++++++.||.|++|
T Consensus 192 --~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~-~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~iw 264 (445)
T 2ovr_B 192 --IHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQC-LHVLMGHVAAVRCVQY-DGRRVVSGAYDFMVKVW 264 (445)
T ss_dssp --EEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCCE-EEEEECCSSCEEEEEE-CSSCEEEEETTSCEEEE
T ss_pred --EEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCcE-EEEEcCCcccEEEEEE-CCCEEEEEcCCCEEEEE
Confidence 667888999999999964 5799999999999999998876 7788899999999999 55789999999999999
Q ss_pred EecCCC
Q psy2113 170 KTKHQP 175 (183)
Q Consensus 170 d~~~~~ 175 (183)
|+++++
T Consensus 265 d~~~~~ 270 (445)
T 2ovr_B 265 DPETET 270 (445)
T ss_dssp EGGGTE
T ss_pred ECCCCc
Confidence 988764
No 114
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.1e-19 Score=128.06 Aligned_cols=154 Identities=23% Similarity=0.366 Sum_probs=123.5
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCC
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 83 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~ 83 (183)
-.+.+++|+|++..++++. +.+|++. .....+.+..+.+|...|.++.| .++.+++++.|+.+++|| ..
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~ 132 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLF----ATSGEDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EG 132 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETT----CCTTSCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TT
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEee----ecCCCCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CC
Confidence 4567889999999998876 4555443 22344566788899999999999 456799999999999999 22
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc-CCCcEEEEEecCCcEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWSDYRYIMSGGQ 162 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~~~~~ 162 (183)
.. ...+..|...+.++.+.|.++..+++++.||.|++||... . ...+.. |...+.+++|+++..+++++.
T Consensus 133 ~~------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 203 (313)
T 3odt_A 133 SL------VYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--V-IKTFSGIHNDVVRHLAVVDDGHFISCSN 203 (313)
T ss_dssp EE------EEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--E-EEEECSSCSSCEEEEEEEETTEEEEEET
T ss_pred cE------EEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--e-EEEEeccCcccEEEEEEcCCCeEEEccC
Confidence 22 5567889999999999886788999999999999999432 2 455555 899999999998766999999
Q ss_pred CCcEEEEEecCCCCC
Q psy2113 163 DNSVRVFKTKHQPKS 177 (183)
Q Consensus 163 dg~i~iwd~~~~~~~ 177 (183)
||.|++||+++++..
T Consensus 204 dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 204 DGLIKLVDMHTGDVL 218 (313)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCeEEEEECCchhhh
Confidence 999999999876543
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.86 E-value=4.9e-20 Score=131.45 Aligned_cols=164 Identities=14% Similarity=0.145 Sum_probs=123.5
Q ss_pred eeceeEEEEEeecCcEEEEEE----eccCCCCcccccc--cCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEE
Q psy2113 6 FGILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLI--LQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWD 79 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd 79 (183)
....+.+++|+| +..++++. +.+|++....... ...+++..+. |...|.+++|++++ +++++.++.|++||
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d 176 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFR 176 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEE
T ss_pred CCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEE
Confidence 344567889999 87777765 6667653210000 0033333444 88899999999877 99999999999999
Q ss_pred cCC-CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCC-----CcceEEeccCCC---------
Q psy2113 80 AEL-GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP-----KVPLFDMLGHED--------- 144 (183)
Q Consensus 80 ~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~-----~~~~~~~~~~~~--------- 144 (183)
++. ..... ......|...+.+++|+|.++.++++++.||.|++||++.. ......+..|..
T Consensus 177 ~~~~~~~~~----~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (342)
T 1yfq_A 177 LPLCEDDNG----TIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAY 252 (342)
T ss_dssp SSCCTTCCC----EEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCC
T ss_pred CCccccccc----eeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccce
Confidence 987 43211 33445688899999999833579999999999999999876 234777777765
Q ss_pred cEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 145 KVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 145 ~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.|.+++|+|+ .+|++++.||.|++||+++++.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 9999999975 8899999999999999987654
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.86 E-value=1.9e-19 Score=132.89 Aligned_cols=149 Identities=22% Similarity=0.402 Sum_probs=122.3
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCC
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~ 85 (183)
+.+++| ++..++++. +.+|+ ....+.+..+.+|.+.|.+++|++ +.+++|+.|+.|++||+++...
T Consensus 176 v~~l~~--~~~~l~sg~~dg~i~vwd-------~~~~~~~~~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~ 245 (435)
T 1p22_A 176 VLCLQY--DERVIITGSSDSTVRVWD-------VNTGEMLNTLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTD 245 (435)
T ss_dssp EEEEEC--CSSEEEEEETTSCEEEEE-------SSSCCEEEEECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSC
T ss_pred EEEEEE--CCCEEEEEcCCCeEEEEE-------CCCCcEEEEEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCC
Confidence 445555 677777765 66664 345677888999999999999974 5899999999999999987654
Q ss_pred ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCc
Q psy2113 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165 (183)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~ 165 (183)
. .....+.+|...|.++++ +++++++|+.||.|++||+++++. +..+.+|...|.++.|+ +.++++|+.||.
T Consensus 246 ~---~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~ 317 (435)
T 1p22_A 246 I---TLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEF-VRTLNGHKRGIACLQYR-DRLVVSGSSDNT 317 (435)
T ss_dssp C---EEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEE-TTEEEEEETTSC
T ss_pred c---eeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcCcE-EEEEcCCCCcEEEEEeC-CCEEEEEeCCCe
Confidence 2 123567789999999999 456999999999999999999876 77888999999999995 479999999999
Q ss_pred EEEEEecCCCC
Q psy2113 166 VRVFKTKHQPK 176 (183)
Q Consensus 166 i~iwd~~~~~~ 176 (183)
|++||+++++.
T Consensus 318 i~iwd~~~~~~ 328 (435)
T 1p22_A 318 IRLWDIECGAC 328 (435)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999987654
No 117
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.85 E-value=9.8e-20 Score=149.11 Aligned_cols=126 Identities=20% Similarity=0.384 Sum_probs=112.9
Q ss_pred cceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC
Q psy2113 43 TPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 121 (183)
Q Consensus 43 ~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 121 (183)
.....+.+|.+.|++++|+|++. +++|+.|+.|++||+.+++. ...+.+|...|.+++|+| ++.++++++.|
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~------~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d 678 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK------LLDIKAHEDEVLCCAFSS-DDSYIATCSAD 678 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------EEEECCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE------EEEeccCCCCEEEEEEec-CCCEEEEEeCC
Confidence 34557789999999999998876 88999999999999988765 667889999999999999 88999999999
Q ss_pred CeEEEEeCCCCCcceEEeccCCCcEEEEEecCC---cEEEEecCCCcEEEEEecCCCC
Q psy2113 122 NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY---RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 122 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+.|++||+.+++. +..+.+|...|.+++|+++ ..+++|+.||.|++||+++++.
T Consensus 679 ~~v~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 679 KKVKIWDSATGKL-VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp SEEEEEETTTCCE-EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred CeEEEEECCCCce-EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 9999999999876 7888999999999999963 5899999999999999987653
No 118
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=7.3e-20 Score=131.99 Aligned_cols=125 Identities=15% Similarity=0.264 Sum_probs=101.6
Q ss_pred eEEEeccCCCeeEEEEccCCe-EEEEeCCCe-EEEEEcCCCCCccCceeEEEee-c-CCcceEEEEEecCCCCEEEEEeC
Q psy2113 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHT-LKIWDAELGGMKKGAIVKSTFS-S-HKEWVQSVRWSPIDPQLFVSASF 120 (183)
Q Consensus 45 ~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~p~~~~~l~~~~~ 120 (183)
+..+.+|.+.|.+++|+|++. |++|+.|++ |++||+++++. ...+. + |...|.+++|+| ++.+|++++.
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~------~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~ 260 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL------VREFRRGLDRADVVDMKWST-DGSKLAVVSD 260 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE------EEEEECTTCCSCEEEEEECT-TSCEEEEEET
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE------EEEEEcCCCCCcEEEEEECC-CCCEEEEEEC
Confidence 678899999999999999876 899999998 99999998765 55666 5 999999999999 8999999999
Q ss_pred CCeEEEEeCCCCCcc-eEEec---------------------cCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 121 DNSVKLWDLRSPKVP-LFDML---------------------GHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 121 dg~i~vwd~~~~~~~-~~~~~---------------------~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|+.|++||++..... ...+. ........++|+++ ..+++++.||.+++|++...+.
T Consensus 261 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 261 KWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp TCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred CCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 999999999865320 11111 11223467899965 7999999999999999887554
No 119
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.85 E-value=2.8e-19 Score=126.70 Aligned_cols=159 Identities=8% Similarity=0.008 Sum_probs=108.2
Q ss_pred eeEEEEEeec----CcEEEEEE--eccCCCCcc---------------cccc-cCccceEEEeccCCCeeEEEEcc---C
Q psy2113 9 LTLGVIFMTV----GALLTLTN--IEVTSLPSF---------------FQLI-LQKTPLITLKGHKEAISAVQWTA---V 63 (183)
Q Consensus 9 ~~~~~~~~~~----~~~~~~~~--~~~~~~~~~---------------~~~~-~~~~~~~~~~~h~~~v~~~~~~~---~ 63 (183)
...+++|+|+ +..++.+. +.+|.++.. .... ..++.+..+.+|...++.++|++ +
T Consensus 113 ~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~ 192 (356)
T 2w18_A 113 EIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGM 192 (356)
T ss_dssp EEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETS
T ss_pred ceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCC
Confidence 4457788888 77666544 333332211 0111 33556667778888888888886 3
Q ss_pred C-eEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCC---cceEEEEEecCCCCEE------------EEEeCCCeEEEE
Q psy2113 64 D-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK---EWVQSVRWSPIDPQLF------------VSASFDNSVKLW 127 (183)
Q Consensus 64 ~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~p~~~~~l------------~~~~~dg~i~vw 127 (183)
+ .|++++.|++|+|||+.+++. ...+.+|. ..+.+++|+| ++.++ ++|+.|++|++|
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk~------l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQL------LKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCCE------EEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEE
T ss_pred CceEEEecCCCcEEEEECCCCcE------EEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 3 388999999999999998876 56676543 3677889999 77765 668889999999
Q ss_pred eCCCCCcceEEe-----ccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 128 DLRSPKVPLFDM-----LGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 128 d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|..+++. +..+ .+|.....+..++ +..+++++.|++|+|||+++++.
T Consensus 266 d~~tgk~-l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~ 317 (356)
T 2w18_A 266 NPKTTLS-VGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQC 317 (356)
T ss_dssp ETTTTEE-EEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSE
T ss_pred ECCCCEE-EEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcE
Confidence 9998875 3332 3666665555554 57899999999999999998764
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=5.3e-19 Score=130.77 Aligned_cols=147 Identities=24% Similarity=0.406 Sum_probs=121.4
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 84 (183)
.+.+++|+ +..++++. +.+|+ ....+.+..+.+|...|.++.|+ ++.+++|+.|+.|++||+++++
T Consensus 161 ~v~~~~~~--~~~l~s~~~dg~i~vwd-------~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~i~~wd~~~~~ 230 (445)
T 2ovr_B 161 GVWSSQMR--DNIIISGSTDRTLKVWN-------AETGECIHTLYGHTSTVRCMHLH-EKRVVSGSRDATLRVWDIETGQ 230 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSCEEEEE-------TTTTEEEEEECCCSSCEEEEEEE-TTEEEEEETTSEEEEEESSSCC
T ss_pred CEEEEEec--CCEEEEEeCCCeEEEEE-------CCcCcEEEEECCCCCcEEEEEec-CCEEEEEeCCCEEEEEECCCCc
Confidence 34556665 45555554 66664 34567788899999999999995 4679999999999999998776
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCC
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDN 164 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg 164 (183)
. ...+.+|...|.++++ ++.++++|+.||.|++||+++++. +..+.+|...|.++.| ++.++++++.||
T Consensus 231 ~------~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~-~~~~l~~~~~d~ 299 (445)
T 2ovr_B 231 C------LHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETC-LHTLQGHTNRVYSLQF-DGIHVVSGSLDT 299 (445)
T ss_dssp E------EEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEE-EEEECCCSSCEEEEEE-CSSEEEEEETTS
T ss_pred E------EEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcE-eEEecCCCCceEEEEE-CCCEEEEEeCCC
Confidence 5 5677889999999998 467899999999999999998875 7788899999999999 568999999999
Q ss_pred cEEEEEecCCCC
Q psy2113 165 SVRVFKTKHQPK 176 (183)
Q Consensus 165 ~i~iwd~~~~~~ 176 (183)
.|++||+++++.
T Consensus 300 ~i~i~d~~~~~~ 311 (445)
T 2ovr_B 300 SIRVWDVETGNC 311 (445)
T ss_dssp CEEEEETTTCCE
T ss_pred eEEEEECCCCCE
Confidence 999999987754
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.84 E-value=1.2e-19 Score=132.61 Aligned_cols=163 Identities=11% Similarity=0.124 Sum_probs=108.1
Q ss_pred eceeEEEEEee--------cCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCC--eEEEEeCC
Q psy2113 7 GILTLGVIFMT--------VGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWD 72 (183)
Q Consensus 7 ~~~~~~~~~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~~~d 72 (183)
.-.+.+++|+| ++.+++.+. +++|+ .....++..+..|...|.+++|+|++ .|++++.|
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd-------~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR-------LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE-------EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETT
T ss_pred CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE-------CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCC
Confidence 34578899998 788888765 88884 34556667778899999999999875 48999999
Q ss_pred CeEEEEEcCCCCCccCc-------------------eeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC
Q psy2113 73 HTLKIWDAELGGMKKGA-------------------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~-------------------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~ 133 (183)
++|++||+++++..... .......+|...+.++.|++.++..+++++.|+.+++||+....
T Consensus 209 ~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~ 288 (393)
T 4gq1_A 209 GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN 288 (393)
T ss_dssp SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----
T ss_pred CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC
Confidence 99999999876532110 01112346788899999984488999999999999999998765
Q ss_pred cceEEeccCCCcEEEEE------------------ecC--C-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 134 VPLFDMLGHEDKVMCVN------------------WSD--Y-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 134 ~~~~~~~~~~~~v~~~~------------------~~~--~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
. ...+..|...+..+. |.+ + .++++|+.||.|++||+.+++..
T Consensus 289 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 289 D-YNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred C-CceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 4 334444444333332 332 2 46778899999999999887654
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=1.2e-19 Score=134.25 Aligned_cols=158 Identities=12% Similarity=0.071 Sum_probs=114.0
Q ss_pred eeEEEEEeecCcEEEE--------EEeccCCCCcccccc----cCccceEEEeccCCCeeEEEEccC-C-eEEEEeCCCe
Q psy2113 9 LTLGVIFMTVGALLTL--------TNIEVTSLPSFFQLI----LQKTPLITLKGHKEAISAVQWTAV-D-EIITSSWDHT 74 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~~~d~~ 74 (183)
.+.+++|+|++..+++ +.+++|++....... .....+..+.+|...|.+++|+|+ + .|++++.|++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 4788999999999984 227777654321000 111124556679999999999986 3 4889999999
Q ss_pred EEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccC-------CCcEE
Q psy2113 75 LKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGH-------EDKVM 147 (183)
Q Consensus 75 v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-------~~~v~ 147 (183)
|++||+++... .....+|...|.+++|+| ++.+|++|+.||.|++||++ +.. ...+..| ...|.
T Consensus 174 v~iwD~~~~~~------~~~~~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~-~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 174 IAVLQVTETVK------VCATLPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQE-KKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEEEEESSSEE------EEEEECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCE-EEEECCCTTCCTTSCEEEE
T ss_pred EEEEEcCCCcc------eeeccCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-Ccc-cccccCCcccCCCCceeEE
Confidence 99999987632 334567889999999999 79999999999999999998 332 3333333 33899
Q ss_pred EEEecCCc-EEEE-ecCCC------cEEEEEecCCC
Q psy2113 148 CVNWSDYR-YIMS-GGQDN------SVRVFKTKHQP 175 (183)
Q Consensus 148 ~~~~~~~~-~l~~-~~~dg------~i~iwd~~~~~ 175 (183)
++.|+++. ++++ ...|| .+++|+++..+
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccCC
Confidence 99999664 4432 33343 38999998754
No 123
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.84 E-value=2.3e-19 Score=126.64 Aligned_cols=117 Identities=23% Similarity=0.501 Sum_probs=93.5
Q ss_pred CeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC
Q psy2113 54 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~ 133 (183)
.++.|+|++++.|++ +.|++|+|||+.+++... ...+.+|...|.+++|+| +++++++|+.||.|++||+++++
T Consensus 27 y~~~l~WS~~~~lAv-g~D~tV~iWd~~tg~~~~----~~~~~~~~~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 27 YLNLVDWSSGNVLAV-ALDNSVYLWSASSGDILQ----LLQMEQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp TCBCEEECTTSEEEE-EETTEEEEEETTTCCEEE----EEECCSTTCCEEEEEECT-TSSEEEEEETTSEEEEEETTTTE
T ss_pred cceEEEECCCCEEEE-EeCCEEEEEECCCCCEEE----EEEecCCCCeEEEEEECC-CCCEEEEEECCCcEEEeecCCce
Confidence 467899998886655 469999999999877521 223456888899999999 89999999999999999998765
Q ss_pred c----------------------------------------ceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 134 V----------------------------------------PLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 134 ~----------------------------------------~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
. ....+.+|...+..+.+.+. .++++++.||.|++||++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 3 12334567777888888854 899999999999999998
Q ss_pred CCCC
Q psy2113 173 HQPK 176 (183)
Q Consensus 173 ~~~~ 176 (183)
+++.
T Consensus 181 ~~~~ 184 (318)
T 4ggc_A 181 PGEG 184 (318)
T ss_dssp CBTT
T ss_pred CCcc
Confidence 7654
No 124
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.82 E-value=5.1e-19 Score=128.09 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=90.6
Q ss_pred ceeEEEEEeecCcEEEEEEec--------cCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEE
Q psy2113 8 ILTLGVIFMTVGALLTLTNIE--------VTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIW 78 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vw 78 (183)
....+++|+|++..++.+... .|.+.. ..........+.+|...|++++|+|++. |++|+.|++|+||
T Consensus 220 ~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iw 296 (365)
T 4h5i_A 220 WSLSKINFIADDTVLIAASLKKGKGIVLTKISIKS---GNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALV 296 (365)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEET---TEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred CCEEEEEEcCCCCEEEEEecCCcceeEEeeccccc---ceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEE
Confidence 456789999999998876532 222111 1112223456788999999999999887 8899999999999
Q ss_pred EcCCCCCccCceeEEE-eecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCC
Q psy2113 79 DAELGGMKKGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP 132 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~ 132 (183)
|+++.+. ... +.+|...|++++|+| ++++|++|+.|++|+|||+...
T Consensus 297 d~~~~~~------~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 297 KLKDLSM------SKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTTTEE------EEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred ECCCCcE------EEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 9988764 444 478999999999999 8999999999999999999754
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.76 E-value=1.9e-16 Score=114.94 Aligned_cols=148 Identities=14% Similarity=0.155 Sum_probs=111.1
Q ss_pred eEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEEEcCC
Q psy2113 10 TLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAEL 82 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~~ 82 (183)
..+++|+|++..+.+.. +.+|+ ....+.+..+..+. .+.+++|+|++. + ++++.++.|++||+.+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d-------~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~ 105 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIID-------TATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTS 105 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEE-------TTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEE-------CCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCC
Confidence 57889999998775433 55553 34556666666555 899999998876 5 4555779999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEE-EEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE-EE
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLF-VSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI-MS 159 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l-~~ 159 (183)
++. ...+. +...+.+++|+| +++.+ ++++.|+.|++||+++++. ...+..+ ..+..++|+++ ..+ ++
T Consensus 106 ~~~------~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~-~~~~~~~~~~dg~~l~~~ 175 (391)
T 1l0q_A 106 NTV------AGTVK-TGKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAV-INTVSVG-RSPKGIAVTPDGTKVYVA 175 (391)
T ss_dssp TEE------EEEEE-CSSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEE-EEEEECC-SSEEEEEECTTSSEEEEE
T ss_pred CeE------EEEEe-CCCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcE-EEEEecC-CCcceEEECCCCCEEEEE
Confidence 654 33444 445789999999 66655 7888899999999998775 5555544 46799999966 555 67
Q ss_pred ecCCCcEEEEEecCCC
Q psy2113 160 GGQDNSVRVFKTKHQP 175 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~ 175 (183)
++.|+.|++||+++++
T Consensus 176 ~~~~~~v~~~d~~~~~ 191 (391)
T 1l0q_A 176 NFDSMSISVIDTVTNS 191 (391)
T ss_dssp ETTTTEEEEEETTTTE
T ss_pred eCCCCEEEEEECCCCe
Confidence 8889999999998764
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.75 E-value=4.5e-17 Score=119.76 Aligned_cols=149 Identities=10% Similarity=0.118 Sum_probs=112.6
Q ss_pred EEEEEeecCcEEEEEE----eccCCCCcccccccCccceE-----EEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc
Q psy2113 11 LGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLI-----TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA 80 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~ 80 (183)
.+++|+|++.+++++. +.+|++ ...+.+. .+.+|.+.|.+++|++++. +++++.|+.|++||+
T Consensus 126 ~~~~~s~~~~~~~~~~~~~~i~~~d~-------~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 126 KSVRFIDNTRLAIPLLEDEGMDVLDI-------NSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp CCCEESSSSEEEEEBTTSSSEEEEET-------TTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred eEEEEeCCCeEEEEeCCCCeEEEEEC-------CCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 4678999666666543 555543 2333333 3457888999999998877 778889999999999
Q ss_pred CCCCCccCceeEEEeecCCcceEEEEEecCCCCEE-EEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEE
Q psy2113 81 ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLF-VSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIM 158 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~ 158 (183)
++.+. ...+..|...+.+++|+| ++..+ ++++.|+.|++||+++++. ...+.. ...+.+++|+|+ ..++
T Consensus 199 ~~~~~------~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~-~~~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 199 KTLAY------KATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLE-IRKTDK-IGLPRGLLLSKDGKELY 269 (433)
T ss_dssp TTCCE------EEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEE-EEECCC-CSEEEEEEECTTSSEEE
T ss_pred CCceE------EEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcE-EEEecC-CCCceEEEEcCCCCEEE
Confidence 87664 556678889999999999 66655 5666899999999998764 444444 456899999966 6888
Q ss_pred Eec--------CCCcEEEEEecCCC
Q psy2113 159 SGG--------QDNSVRVFKTKHQP 175 (183)
Q Consensus 159 ~~~--------~dg~i~iwd~~~~~ 175 (183)
+++ .||.|++||+++++
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEECCCCccccCCCeEEEEECCCCc
Confidence 777 58899999998764
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.74 E-value=9.6e-16 Score=111.28 Aligned_cols=149 Identities=14% Similarity=0.131 Sum_probs=111.6
Q ss_pred eeEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~ 81 (183)
...+++|+|++..+.+.. +.+| +....+.+..+..+ ..+.+++|+|++. + ++++.++.|++||++
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~-------d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVI-------NTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEE-------ETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEE-------ECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 457889999999775433 4444 33445566666655 4568999998875 4 577889999999998
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe---CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI 157 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l 157 (183)
+.+. ...+ .+...+.+++|+| +++++++++ .++.|++||+++++. ...+..+. .+.+++|+|+ +++
T Consensus 189 ~~~~------~~~~-~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~-~~~~~~~s~dg~~l 258 (391)
T 1l0q_A 189 TNSV------IDTV-KVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKI-TARIPVGP-DPAGIAVTPDGKKV 258 (391)
T ss_dssp TTEE------EEEE-ECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEE-EEEEECCS-SEEEEEECTTSSEE
T ss_pred CCeE------EEEE-ecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeE-EEEEecCC-CccEEEEccCCCEE
Confidence 7653 3333 3566889999999 777777776 689999999998765 55565554 5789999975 555
Q ss_pred -EEecCCCcEEEEEecCCC
Q psy2113 158 -MSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 158 -~~~~~dg~i~iwd~~~~~ 175 (183)
++++.|+.|++||+++++
T Consensus 259 ~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 259 YVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEETTTTEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEECCCCc
Confidence 677899999999998754
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=1.9e-15 Score=111.08 Aligned_cols=157 Identities=10% Similarity=0.049 Sum_probs=113.1
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EE-EEeCCC--eEEEEEcCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-II-TSSWDH--TLKIWDAELGG 84 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~-s~~~d~--~v~vwd~~~~~ 84 (183)
...+++|+|+|..++..............+...++. ..+..|.+.+.+++|+|++. |+ +++.++ .|++||+.+++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 567889999999888765321111111113333333 45677888999999999987 55 566555 49999998765
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC-CC--eEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEe
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-DN--SVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSG 160 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~ 160 (183)
...+..|...+.+++|+| +++.|+.++. ++ .|++||+.+++ ...+..+...+..++|+|+ ++|+.+
T Consensus 259 -------~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~~i~~~d~~~~~--~~~l~~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 259 -------IRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp -------EEECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEE
T ss_pred -------EEeCcCCCCcccceEECC-CCCEEEEEECCCCCcEEEEEECCCCC--EEEEecCCCcccCeEECCCCCEEEEE
Confidence 345667888999999999 7888887775 44 78888998876 3455667778999999976 777777
Q ss_pred cCC---CcEEEEEecCCCC
Q psy2113 161 GQD---NSVRVFKTKHQPK 176 (183)
Q Consensus 161 ~~d---g~i~iwd~~~~~~ 176 (183)
+.+ ..|.+||+.+++.
T Consensus 329 ~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 329 SSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EECSSCEEEEEEETTTCCE
T ss_pred ECcCCceEEEEEECCCCCE
Confidence 654 5899999987653
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.73 E-value=7.3e-16 Score=113.31 Aligned_cols=150 Identities=9% Similarity=0.056 Sum_probs=115.2
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEEEcCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAEL 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~~ 82 (183)
.+.+++|++++.+++.+. +.+|+ ....+.+..+..|...+.+++|+|++. + ++++.++.|++||+++
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~ 243 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFD-------LKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT 243 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEE-------TTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEE-------CCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC
Confidence 456788999998887764 55564 345566778888999999999998875 4 4556899999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe--------CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS--------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~--------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 154 (183)
++. ...+. +...+.+++|+| ++..+++++ .|+.|++||+++++. .....+...+..++|+|+
T Consensus 244 ~~~------~~~~~-~~~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~ 313 (433)
T 3bws_A 244 KLE------IRKTD-KIGLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTIGPPGNKRHIVSGNT 313 (433)
T ss_dssp TEE------EEECC-CCSEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEEEEEECEEEEEECSS
T ss_pred CcE------EEEec-CCCCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcE--EeeccCCCCcceEEECCC
Confidence 653 33443 345699999999 787888877 488999999998764 333456668899999965
Q ss_pred -c-EEEEecCCCcEEEEEecCCC
Q psy2113 155 -R-YIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 155 -~-~l~~~~~dg~i~iwd~~~~~ 175 (183)
+ .+++++.|+.|++||+++++
T Consensus 314 g~~l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 314 ENKIYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp TTEEEEEETTTTEEEEEETTTTE
T ss_pred CCEEEEEecCCCEEEEEECCCCc
Confidence 3 55777999999999998654
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.68 E-value=1.6e-14 Score=106.16 Aligned_cols=155 Identities=11% Similarity=0.048 Sum_probs=108.6
Q ss_pred ceeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeC-CC--eEEEEEcCCC
Q psy2113 8 ILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSW-DH--TLKIWDAELG 83 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~-d~--~v~vwd~~~~ 83 (183)
....+++|+|+|..++...-.-........+.... ....+..|...+.+++|+|++. |+.++. ++ .|++||+.++
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~ 301 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 301 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC-CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCC
Confidence 34678899999998774331101100111122223 3356778888999999999987 666665 44 6777888765
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC---CeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEE
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~ 159 (183)
+. ..+..+...+.+++|+| ++++|+.++.+ ..|++||+.+++. ..+..+. .+.+++|+|+ ..|+.
T Consensus 302 ~~-------~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 302 AP-------QRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp CC-------EECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECTTSSEEEE
T ss_pred CE-------EEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcCCCCEEEE
Confidence 52 23455677889999999 78888877764 5899999998764 4455554 8899999976 77888
Q ss_pred ecCCC---cEEEEEecCC
Q psy2113 160 GGQDN---SVRVFKTKHQ 174 (183)
Q Consensus 160 ~~~dg---~i~iwd~~~~ 174 (183)
++.++ .|.+||+...
T Consensus 371 ~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 371 SSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEETTEEEEEEEETTSC
T ss_pred EEcCCCccEEEEEECCCC
Confidence 77776 7999998744
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.61 E-value=9.7e-14 Score=96.46 Aligned_cols=160 Identities=10% Similarity=0.078 Sum_probs=107.9
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EE-EEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-II-TSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~-s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|+|++..++............+.-.........+..+ ..+..++|+|++. ++ +++.++.+++|++......
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~- 164 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV- 164 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-
T ss_pred ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-
Confidence 456789999998887662111111111111112223444433 3488999999876 54 7788999999997532211
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEe-CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCC--
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQD-- 163 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d-- 163 (183)
...+..+...+.+++|+| +++.++.++ .++.+.+|++.........+..+...+..++|+|+ .+|+.++.+
T Consensus 165 ----~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 165 ----ETRLTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp ----EEECCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETT
T ss_pred ----ceEcccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCC
Confidence 345666788899999999 777666555 58899999886333336677778888999999966 777777765
Q ss_pred ---------CcEEEEEecCCCC
Q psy2113 164 ---------NSVRVFKTKHQPK 176 (183)
Q Consensus 164 ---------g~i~iwd~~~~~~ 176 (183)
+.|.+||+.+++.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcccccCceEEEEEecCCCCc
Confidence 5699999987653
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=3.4e-13 Score=93.67 Aligned_cols=150 Identities=13% Similarity=0.085 Sum_probs=101.8
Q ss_pred ceeEEEEEeecCcEEEEEE---eccCCCCcccccccC-ccceEEEecc-CCCeeEEEEccCCe-EEEEe--CCCeEEEEE
Q psy2113 8 ILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQ-KTPLITLKGH-KEAISAVQWTAVDE-IITSS--WDHTLKIWD 79 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~h-~~~v~~~~~~~~~~-l~s~~--~d~~v~vwd 79 (183)
....+++|+|++..++... +.+|+ ... .+.......+ ...+.+++|+|++. +++++ .++...||.
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d-------~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLS-------LAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEE-------SSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEe-------CCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 3467889999999888765 44443 233 3444444455 36789999999876 66666 334555555
Q ss_pred c--CCCCCccCceeEEEeecCCcceEEEEEecCCCCEEE-EEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-c
Q psy2113 80 A--ELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFV-SASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R 155 (183)
Q Consensus 80 ~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~-~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~ 155 (183)
+ .... ...+..+ ..+..++|+| +++.++ ++..++.+.+|+++........+..+...+.+++|+|+ .
T Consensus 115 ~~~~~~~-------~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 185 (297)
T 2ojh_A 115 LPSTGGT-------PRLMTKN-LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGR 185 (297)
T ss_dssp EETTCCC-------CEECCSS-SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSS
T ss_pred EECCCCc-------eEEeecC-CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCC
Confidence 4 4333 2233333 3488999999 676655 78889999999865332225667778889999999976 6
Q ss_pred EEEEec-CCCcEEEEEecC
Q psy2113 156 YIMSGG-QDNSVRVFKTKH 173 (183)
Q Consensus 156 ~l~~~~-~dg~i~iwd~~~ 173 (183)
.++.++ .++.+++|++..
T Consensus 186 ~l~~~~~~~~~~~i~~~~~ 204 (297)
T 2ojh_A 186 WIYFNSSRTGQMQIWRVRV 204 (297)
T ss_dssp EEEEEECTTSSCEEEEEET
T ss_pred EEEEEecCCCCccEEEECC
Confidence 666554 699999999873
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.56 E-value=5.2e-13 Score=101.37 Aligned_cols=155 Identities=20% Similarity=0.247 Sum_probs=112.1
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEcc----CCe-EEEEe-CCCeEEEEE
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA----VDE-IITSS-WDHTLKIWD 79 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~----~~~-l~s~~-~d~~v~vwd 79 (183)
..+++|+|+|+.+.+.+ +.+|++ ...+.+.+.++. +......++|+| +++ +++++ .+++|.+||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~-----~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D 254 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDL-----WAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 254 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEET-----TSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEEC-----cCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEe
Confidence 56889999999998877 444432 113456667776 455679999999 876 66665 589999999
Q ss_pred cCCCCCccCceeEEEeec----------C-CcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEE
Q psy2113 80 AELGGMKKGAIVKSTFSS----------H-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMC 148 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~----------~-~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 148 (183)
..+.+. ...+.. | ...+..+.++|++..++++...++.|.+||..+.+........+...+..
T Consensus 255 ~~t~~~------~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~ 328 (543)
T 1nir_A 255 GETLEP------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHD 328 (543)
T ss_dssp TTTCCE------EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCC
T ss_pred cccccc------ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccC
Confidence 987665 333332 2 23689999999666778888889999999998876533223345667889
Q ss_pred EEecCC-cEEE-EecCCCcEEEEEecCCCC
Q psy2113 149 VNWSDY-RYIM-SGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 149 ~~~~~~-~~l~-~~~~dg~i~iwd~~~~~~ 176 (183)
+.|+|+ ++++ ++..+++|.+||+.+++.
T Consensus 329 ~~~spdg~~l~va~~~~~~v~v~D~~tg~l 358 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNSNKVAVIDSKDRRL 358 (543)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTTTEE
T ss_pred ceECCCCCEEEEEecCCCeEEEEECCCCeE
Confidence 999976 6555 556689999999987653
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.54 E-value=2.2e-14 Score=111.80 Aligned_cols=145 Identities=10% Similarity=0.066 Sum_probs=99.8
Q ss_pred ceeceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCC---CeeEEEEccCCe-EEEEeCC-----
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKE---AISAVQWTAVDE-IITSSWD----- 72 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~-l~s~~~d----- 72 (183)
++.....+++|+|+|.+++... +.+| +...++....+..|.. .|.+++|+|+++ |++++.+
T Consensus 14 ~~~~~~~~~~~spdg~~~~~~~dg~i~~~-------d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 14 DFKIHDPEAKWISDTEFIYREQKGTVRLW-------NVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp TTCCCCCCCCBSSSSCBCCCCSSSCEEEB-------CGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred CCcccccccEEcCCCcEEEEeCCCCEEEE-------ECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCcccee
Confidence 3444567889999999765521 4444 3345555566666665 499999999987 6777654
Q ss_pred ----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCc---
Q psy2113 73 ----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK--- 145 (183)
Q Consensus 73 ----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~--- 145 (183)
+.+++||+.+++... +.....|...+..++|+| +++.|+.++. +.|++||+.+++. ......+...
T Consensus 87 ~~~~~~i~~~d~~~~~~~~----l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~-~~~~~~~~~~~~~ 159 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDPQS----LDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQA-IRVVSTGKEGVIY 159 (723)
T ss_dssp SCCCSEEEEEESSSCCCEE----CCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCC-EEEECCCBTTTEE
T ss_pred ecceeeEEEEECCCCceEe----ccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCce-EEEecCCCCCceE
Confidence 788899998766310 111223445588999999 8888888875 8999999998765 4444443332
Q ss_pred ---------------EEEEEecCC-cEEEEecCC
Q psy2113 146 ---------------VMCVNWSDY-RYIMSGGQD 163 (183)
Q Consensus 146 ---------------v~~~~~~~~-~~l~~~~~d 163 (183)
+..++|+|+ +.|+.++.|
T Consensus 160 ~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 160 NGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred CcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 378999976 788877654
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=1.4e-12 Score=93.08 Aligned_cols=160 Identities=6% Similarity=-0.014 Sum_probs=109.5
Q ss_pred ceeEEEEEeecCcEEEEEEeccC----CCCcccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEEEcC
Q psy2113 8 ILTLGVIFMTVGALLTLTNIEVT----SLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAE 81 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~ 81 (183)
....+++|+|++..+.+.....+ .-.....+....+.+..+.. ...+..++|+|++. + ++...++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 34567899999988776652211 00011113344555555553 34578899998875 4 455668999999998
Q ss_pred CCCCccCceeEEEeecCCc---------ceEEEEEecCCCCEEEEEe--CCCeEEEEeCCCCCcceEEeccCCCcEEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSHKE---------WVQSVRWSPIDPQLFVSAS--FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~---------~v~~~~~~p~~~~~l~~~~--~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 150 (183)
+++. ...+..+.. .+.+++|+| +++.++.+. .++.|.+||.++++. ...+..+...+..++
T Consensus 120 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 120 TGEV------KGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKL-KTAIQNTGKMSTGLA 191 (353)
T ss_dssp TCCE------EEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEE-EEEECCCCTTCCCCE
T ss_pred CCee------EEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCce-EEEecCCCCccceEE
Confidence 7764 334443322 278899999 666655554 478999999998775 555554566688899
Q ss_pred ecCC-cEEEEecCCCcEEEEEecCCCC
Q psy2113 151 WSDY-RYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 151 ~~~~-~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|+++ +.+++++.++.|.+||+.+++.
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDTADNKI 218 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEETTTTEE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCeE
Confidence 9965 7888888999999999887653
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.54 E-value=1.6e-12 Score=92.84 Aligned_cols=157 Identities=10% Similarity=0.013 Sum_probs=107.9
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCC---------eeEEEEccCCe-EEEEe--CCCeEEE
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEA---------ISAVQWTAVDE-IITSS--WDHTLKI 77 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~---------v~~~~~~~~~~-l~s~~--~d~~v~v 77 (183)
..+++|+|++..+.+.+..-..+ ...+....+.+..+..+... +.++.|+|++. ++.++ .++.|.+
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v--~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAV--TAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEE--EEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEE--EEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 45788999998766654211111 11133455555666654432 68899998865 55444 5789999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc----CCCcEEEEEecC
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG----HEDKVMCVNWSD 153 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~~~v~~~~~~~ 153 (183)
||..+.+. ...+..+...+..++|+| +++.+++++.++.+.+||..+++. ...... +...+..++|+|
T Consensus 169 ~d~~~~~~------~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 169 VDGGNIKL------KTAIQNTGKMSTGLALDS-EGKRLYTTNADGELITIDTADNKI-LSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp EETTTTEE------EEEECCCCTTCCCCEEET-TTTEEEEECTTSEEEEEETTTTEE-EEEEECCCSSSCCCEEEEEEET
T ss_pred EcCCCCce------EEEecCCCCccceEEECC-CCCEEEEEcCCCeEEEEECCCCeE-EEEEEcCCCCCCcccceEEECC
Confidence 99987654 444544556688999999 888888888899999999998875 433332 455688899996
Q ss_pred C-cEEEEe-cCCCcEEEEEecCCCC
Q psy2113 154 Y-RYIMSG-GQDNSVRVFKTKHQPK 176 (183)
Q Consensus 154 ~-~~l~~~-~~dg~i~iwd~~~~~~ 176 (183)
+ ++++.+ ..++.|.+||+.+++.
T Consensus 241 dg~~l~~~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 241 ARQRAFITDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTTEEEEEESSSSEEEEEETTTCCE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcE
Confidence 5 555554 4569999999987653
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.54 E-value=4e-13 Score=108.92 Aligned_cols=148 Identities=14% Similarity=0.119 Sum_probs=113.7
Q ss_pred eEEEEEe-ecCcEEEEEE---eccCCCCcccccccCccceEEEeccCC-CeeEEEEccCCe-EEEEeCCCeEE-EEEcCC
Q psy2113 10 TLGVIFM-TVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKE-AISAVQWTAVDE-IITSSWDHTLK-IWDAEL 82 (183)
Q Consensus 10 ~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~-l~s~~~d~~v~-vwd~~~ 82 (183)
..+++|+ |+|..++... +.++.. ... ....+..|.. .+..+.|+ ++. ++.++.+..+. +||+..
T Consensus 298 v~~~~~S~pdG~~la~~~~~~i~~~~~-------~~~-~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVSRGQAFIQDV-------SGT-YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp GGEEEEEECGGGCEEEEETTEEEEECT-------TSS-BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred cceeeecCCCCCEEEEEEcCEEEEEcC-------CCC-ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 5678999 9999877765 222322 122 2344667777 89999999 876 77777788888 889876
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
.. ...+.+|...+..++|+| +++.+++++.++.|++||+.+++. ......|...+..++|+|+ ++|++++
T Consensus 369 ~~-------~~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~-~~~~~~~~~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 369 GK-------AEKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKP-TVIERSREAMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp CC-------EEECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCE-EEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred CC-------ceEecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCce-EEeccCCCCCccceEECCCCCeEEEEe
Confidence 54 234447778899999999 899999999999999999998875 5555588889999999976 7787776
Q ss_pred CCC----------cEEEEEecCCC
Q psy2113 162 QDN----------SVRVFKTKHQP 175 (183)
Q Consensus 162 ~dg----------~i~iwd~~~~~ 175 (183)
.++ .|++||+.+++
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTE
T ss_pred cCccccccCCCCCeEEEEECCCCc
Confidence 644 89999998754
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.53 E-value=2.8e-13 Score=105.92 Aligned_cols=146 Identities=12% Similarity=0.103 Sum_probs=97.6
Q ss_pred eeEEEEEeecCcEEEEEEeccC---CCCcccccccCccceEEEeccCC------------------------CeeEEEEc
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVT---SLPSFFQLILQKTPLITLKGHKE------------------------AISAVQWT 61 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~h~~------------------------~v~~~~~~ 61 (183)
...+++|+|+|..++.....-. .......+...++....+..+.. .|.+++|+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4678899999998887553100 00011113334444444444433 37899999
Q ss_pred cCCe-EEEEeCCCeEEEEEcCCCC--CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEE
Q psy2113 62 AVDE-IITSSWDHTLKIWDAELGG--MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD 138 (183)
Q Consensus 62 ~~~~-l~s~~~d~~v~vwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 138 (183)
|+++ |++++. +.|++||+.++. . ...+..+...+..++|+| +++.|+.++ ++.|++||+.+++. ...
T Consensus 118 pDg~~l~~~~~-~~i~~~d~~~~~~~~------~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~-~~~ 187 (741)
T 2ecf_A 118 PDAQRLLFPLG-GELYLYDLKQEGKAA------VRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQ-MQL 187 (741)
T ss_dssp TTSSEEEEEET-TEEEEEESSSCSTTS------CCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEE-EEC
T ss_pred CCCCEEEEEeC-CcEEEEECCCCCcce------EEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCE-EEe
Confidence 9987 555554 999999998762 1 234566778899999999 888888887 56999999988753 322
Q ss_pred eccCCCc----------------EEEEEecCC-cEEEEecCCC
Q psy2113 139 MLGHEDK----------------VMCVNWSDY-RYIMSGGQDN 164 (183)
Q Consensus 139 ~~~~~~~----------------v~~~~~~~~-~~l~~~~~dg 164 (183)
...+... +..+.|+|+ ++|+.++.|+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 2333322 477999976 7788877665
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.52 E-value=8.1e-12 Score=88.62 Aligned_cols=155 Identities=12% Similarity=0.161 Sum_probs=101.9
Q ss_pred EEEEeecCcEEEEEEeccCCCCcccccccCccc-eEEEeccCCCeeEEEEccCCe-EEEEeCC-C--eEEEEEcCCCCCc
Q psy2113 12 GVIFMTVGALLTLTNIEVTSLPSFFQLILQKTP-LITLKGHKEAISAVQWTAVDE-IITSSWD-H--TLKIWDAELGGMK 86 (183)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~-l~s~~~d-~--~v~vwd~~~~~~~ 86 (183)
+++|+|++..+.+.......+. ..+....+. ...+..+..+..+++|+|++. ++++..+ + .|.+||+.+++.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~--~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~- 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLV--QIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKF- 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEE--EEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEE-
T ss_pred eEEEcCCCCEEEEEeCCCCeEE--EEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCe-
Confidence 8899999997666552111111 112334444 566666777766699999887 5544334 2 899999987654
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCC-EEEEEeCCCe-EEEEeCCCCCcce---EEeccCCCcEEEEEecCC-cE-EEE
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDNS-VKLWDLRSPKVPL---FDMLGHEDKVMCVNWSDY-RY-IMS 159 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~-i~vwd~~~~~~~~---~~~~~~~~~v~~~~~~~~-~~-l~~ 159 (183)
...+. ......+++|+| +++ ++++...++. +.+|++....... .........+..++|+|+ ++ +++
T Consensus 121 -----~~~~~-~~~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 193 (331)
T 3u4y_A 121 -----ISTIP-IPYDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVA 193 (331)
T ss_dssp -----EEEEE-CCTTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEE
T ss_pred -----EEEEE-CCCCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEE
Confidence 33343 344578999999 665 5555566678 9999998644311 122234456899999976 54 455
Q ss_pred ecCCCcEEEEEecCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~ 176 (183)
+..++.|++||+++++.
T Consensus 194 ~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 194 NLIGNSIGILETQNPEN 210 (331)
T ss_dssp ETTTTEEEEEECSSTTS
T ss_pred eCCCCeEEEEECCCCcc
Confidence 66789999999987665
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.51 E-value=2.7e-13 Score=105.60 Aligned_cols=150 Identities=13% Similarity=0.197 Sum_probs=104.3
Q ss_pred eeEEEEEeecCcEEEEEE--eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCC----
Q psy2113 9 LTLGVIFMTVGALLTLTN--IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL---- 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~---- 82 (183)
...+++|+|++.++...+ +.+|++ ...+ ...+..+...+.+++|+|++..++.+.++.|++||+.+
T Consensus 83 ~v~~~~~spd~~~~~~~~~~i~~~d~-------~~~~-~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~ 154 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQGGLVGFDM-------LARK-VTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEG 154 (706)
T ss_dssp CCEEEEETTTTEEEEEETTEEEEEET-------TTTE-EEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSC
T ss_pred CceeEEECCCCeEEEEECCEEEEEEC-------CCCc-eEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCccccc
Confidence 367889999954444433 444432 2332 34455677789999999998744446789999999987
Q ss_pred -CCCccCceeEEEeecCCcc--------------eEEEEEecCCCCEEEEEe----------------------------
Q psy2113 83 -GGMKKGAIVKSTFSSHKEW--------------VQSVRWSPIDPQLFVSAS---------------------------- 119 (183)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~--------------v~~~~~~p~~~~~l~~~~---------------------------- 119 (183)
++. ......+... +.+++|+| +++.|++++
T Consensus 155 ~g~~------~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~ 227 (706)
T 2z3z_A 155 MSRA------IAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPM 227 (706)
T ss_dssp CCCC------EESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCB
T ss_pred CCCc------EEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCC
Confidence 543 2112222222 58899999 888888887
Q ss_pred -----CCCeEEEEeCCCCCcceEEe--ccCCCcEEEEEecCC-cEEEEecCCC-----cEEEEEecCC
Q psy2113 120 -----FDNSVKLWDLRSPKVPLFDM--LGHEDKVMCVNWSDY-RYIMSGGQDN-----SVRVFKTKHQ 174 (183)
Q Consensus 120 -----~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~-~~l~~~~~dg-----~i~iwd~~~~ 174 (183)
.+..|++||+.+++. .... ..|...+..++|+|+ +.|++++.++ .|.+||+.++
T Consensus 228 ~g~~~~~~~l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 228 AGTPSHHVTVGIYHLATGKT-VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp TTSCCCEEEEEEEETTTTEE-EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred CCCCCCeeEEEEEECCCCce-EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 346899999988763 2222 246678999999976 7788877765 8999999876
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=2.6e-12 Score=97.51 Aligned_cols=145 Identities=10% Similarity=0.015 Sum_probs=106.2
Q ss_pred EEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEc--CCCCCc
Q psy2113 14 IFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDA--ELGGMK 86 (183)
Q Consensus 14 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~--~~~~~~ 86 (183)
+|+|++.+++... +.+| +....+.+.++..+.. +..++|+|+++ +++++.|+.|++||+ .+.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~-------D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~- 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALV-------DGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK- 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEE-------ETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE-
T ss_pred ccCCCCEEEEEEcCCCeEEEE-------ECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcE-
Confidence 3778887666543 4444 4456667778874433 88999999876 888999999999999 55443
Q ss_pred cCceeEEEeecCCcceEEEEEec----CCCCEEEEEe-CCCeEEEEeCCCCCcceEEecc----------CC-CcEEEEE
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSP----IDPQLFVSAS-FDNSVKLWDLRSPKVPLFDMLG----------HE-DKVMCVN 150 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p----~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~----------~~-~~v~~~~ 150 (183)
...+. +...+..++|+| + ++++++++ .++.|.+||..+.+. +..+.. |. ..+..+.
T Consensus 215 -----~~~i~-~g~~p~~va~sp~~~~d-g~~l~v~~~~~~~v~v~D~~t~~~-~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 215 -----VAEIK-IGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLEP-KQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp -----EEEEE-CCSEEEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCCE-EEEEECCEECSSSCCEESCCCEEEEE
T ss_pred -----EEEEe-cCCCcceEEeCCCcCCC-CCEEEEEEccCCeEEEEecccccc-ceeecccCcccCccccccCCceEEEE
Confidence 44555 455689999998 5 45666665 589999999998875 555443 22 3788999
Q ss_pred ecCC--cEEEEecCCCcEEEEEecCCC
Q psy2113 151 WSDY--RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 151 ~~~~--~~l~~~~~dg~i~iwd~~~~~ 175 (183)
++++ .++++...++.|.+||+.+.+
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~ 313 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDID 313 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSS
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCC
Confidence 9963 677888899999999998754
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.50 E-value=4.4e-13 Score=102.36 Aligned_cols=106 Identities=15% Similarity=0.097 Sum_probs=88.2
Q ss_pred eEEEEccCCe-EEEEeCC----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC--eEEEEe
Q psy2113 56 SAVQWTAVDE-IITSSWD----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN--SVKLWD 128 (183)
Q Consensus 56 ~~~~~~~~~~-l~s~~~d----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~vwd 128 (183)
.++.|+|+|+ +++++.+ +.|++||+.+++. ..+..|...+..++|+| +++.|+++..++ .|++||
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~-------~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d 224 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL-------RVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVD 224 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC-------EEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEEC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc-------eEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEc
Confidence 7899999987 6656666 7899999987763 35677888899999999 888888888888 899999
Q ss_pred CCCCCcceEEeccCCCcEEEEE--------ecCC-cEEEEecCCCcEEEEEe
Q psy2113 129 LRSPKVPLFDMLGHEDKVMCVN--------WSDY-RYIMSGGQDNSVRVFKT 171 (183)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~--------~~~~-~~l~~~~~dg~i~iwd~ 171 (183)
+.+++. . .+..|...+..+. |+|+ ..+++++.|+.+++|++
T Consensus 225 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 225 PRDGSV-E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TTTCCE-E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCCCcE-E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 998875 3 6677777777777 9976 78889999999999998
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.49 E-value=4.3e-13 Score=104.58 Aligned_cols=156 Identities=13% Similarity=0.117 Sum_probs=101.8
Q ss_pred eEEEEEeecCcEEEEEEec--cCC----CCcccccccCccceEEE---eccCCCeeEEEEccCCe-EEEEeCCCeEEEEE
Q psy2113 10 TLGVIFMTVGALLTLTNIE--VTS----LPSFFQLILQKTPLITL---KGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 79 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd 79 (183)
..+++|+|+|..++..... .+. -....++...++. ..+ .+|...+..++|+|+|+ |+.++. +.|++||
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~ 140 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCA 140 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEES
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEE
Confidence 5678999999988876421 110 0011112223322 233 34455688999999986 666554 8999999
Q ss_pred cCCCCCccCceeEEEeecCCcc------------------eEEEEEecCCCCEEEEEeCCC-------------------
Q psy2113 80 AELGGMKKGAIVKSTFSSHKEW------------------VQSVRWSPIDPQLFVSASFDN------------------- 122 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~------------------v~~~~~~p~~~~~l~~~~~dg------------------- 122 (183)
+.+++. ......+... +.+++|+| +++.|+.++.|+
T Consensus 141 ~~~g~~------~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 141 HVGKQA------IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp SSSSCC------EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred CCCCce------EEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 987654 2223333322 37899999 888888887543
Q ss_pred ---------------eEEEEeCCCCCcceEEeccC------CCcEEEEEecCC-cEEEEec----CCCcEEEEEecCCC
Q psy2113 123 ---------------SVKLWDLRSPKVPLFDMLGH------EDKVMCVNWSDY-RYIMSGG----QDNSVRVFKTKHQP 175 (183)
Q Consensus 123 ---------------~i~vwd~~~~~~~~~~~~~~------~~~v~~~~~~~~-~~l~~~~----~dg~i~iwd~~~~~ 175 (183)
.|++||+.+++. ...+..+ ...+..++|+|+ +++++.. .+..|++||+.+++
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV 291 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC
T ss_pred eeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc
Confidence 799999988764 3444443 567899999976 5665543 23579999988765
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.49 E-value=2e-12 Score=91.84 Aligned_cols=156 Identities=10% Similarity=0.011 Sum_probs=100.5
Q ss_pred eeEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEe-CCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~-~d~~v~vwd~~ 81 (183)
...+++|+|++..+++.. +.+|.+.. .....+.+..+..+. .+..++|+|++. +++++ .++.|.+||+.
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP---DDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEEECT---TTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCceEEECCCCCEEEEeecCCCeEEEEEecC---CCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 345688999999877765 33332210 011223344555444 788999999876 55554 58899999995
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe-CCCeEEEEeCCC-CCcce-E--Eec-cCCCcEEEEEecCC-
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLRS-PKVPL-F--DML-GHEDKVMCVNWSDY- 154 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~vwd~~~-~~~~~-~--~~~-~~~~~v~~~~~~~~- 154 (183)
.+.. ......+. ....+.+++|+| +++.+++++ .++.|.+||+.+ ++... . ... .....+..++|+|+
T Consensus 115 ~~~~---~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 115 DGLP---VGVVDVVE-GLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp TTEE---EEEEEEEC-CCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred CCcc---cccccccc-CCCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 2211 11122333 344588999999 777676666 899999999987 44211 1 222 23457889999976
Q ss_pred cEE-EEecCCCcEEEEEecC
Q psy2113 155 RYI-MSGGQDNSVRVFKTKH 173 (183)
Q Consensus 155 ~~l-~~~~~dg~i~iwd~~~ 173 (183)
.++ +++..++.|.+||+..
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp SEEEEEETTTTEEEEEESSC
T ss_pred CEEEEEeCCCCEEEEEEecC
Confidence 555 4555899999999964
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.48 E-value=4.2e-13 Score=104.97 Aligned_cols=150 Identities=11% Similarity=0.091 Sum_probs=104.3
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccccccCcc--ceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCC
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKT--PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~ 84 (183)
..+++|+|+|..++... +.+|++ .... ....+..|...+..++|+|+|+.++...++.|++||+.+++
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~-------~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDL-------KQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGR 183 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEES-------SSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTE
T ss_pred cceeEECCCCCEEEEEeCCcEEEEEC-------CCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCC
Confidence 45788999999888765 444433 2221 33456678888999999999884443446799999998754
Q ss_pred CccCceeEEEeecCCcc----------------eEEEEEecCCCCEEEEEeCCC--------------------------
Q psy2113 85 MKKGAIVKSTFSSHKEW----------------VQSVRWSPIDPQLFVSASFDN-------------------------- 122 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~----------------v~~~~~~p~~~~~l~~~~~dg-------------------------- 122 (183)
. ......+... +..++|+| +++.|++++.|+
T Consensus 184 ~------~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~ 256 (741)
T 2ecf_A 184 Q------MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAA 256 (741)
T ss_dssp E------EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBT
T ss_pred E------EEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCC
Confidence 3 1112222221 47799999 888888887665
Q ss_pred -------eEEEEeCCC-CCcceEEec--cCCCcEEEEEecCC-cEEEEecC-----CCcEEEEEecCCC
Q psy2113 123 -------SVKLWDLRS-PKVPLFDML--GHEDKVMCVNWSDY-RYIMSGGQ-----DNSVRVFKTKHQP 175 (183)
Q Consensus 123 -------~i~vwd~~~-~~~~~~~~~--~~~~~v~~~~~~~~-~~l~~~~~-----dg~i~iwd~~~~~ 175 (183)
.|++||+.+ ++. ..... .|...+..++| |+ +.|+.++. +..|.+||+.+++
T Consensus 257 g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 257 GDANVQVKLGVISPAEQAQT-QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp TSCCCEEEEEEECSSTTCCC-EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred CCCCCeeEEEEEECCCCCce-EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 889999988 764 33222 47788999999 87 67775543 5679999988765
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.47 E-value=8.8e-12 Score=88.31 Aligned_cols=161 Identities=13% Similarity=0.137 Sum_probs=103.6
Q ss_pred eeEEEEEeecCcEEEEEEec-----cC----CCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTNIE-----VT----SLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vw 78 (183)
...+++|+|++..+.+.... .+ .-.....+....+.+..+.. ...+.+++|+|++. ++++ ++.+++|
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 34568899999877766311 00 00001112334445555543 45678899999887 6665 6889999
Q ss_pred EcCCCCCccC----c--e--------------------------------------------e----------EEEeecC
Q psy2113 79 DAELGGMKKG----A--I--------------------------------------------V----------KSTFSSH 98 (183)
Q Consensus 79 d~~~~~~~~~----~--~--------------------------------------------~----------~~~~~~~ 98 (183)
|+.+++.... . . . ...+..+
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 9876542100 0 0 0 0011123
Q ss_pred CcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 99 ~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
...+.+++|+| ++++++++ ++.|.+||+.+++. ...+. ....+.+++|+++ +++++++.++.|.+||+++++..
T Consensus 240 ~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 240 DVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNAS-IKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp SSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEE-EEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred CCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcC-cceec-CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 34566799999 78888777 69999999998764 44443 3346789999965 78888888999999999887643
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.45 E-value=1.4e-11 Score=88.02 Aligned_cols=156 Identities=8% Similarity=0.031 Sum_probs=97.4
Q ss_pred eEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceEEEeccC-CCeeEEEEccCCe-EE-EEeCCCeEEEEEcC
Q psy2113 10 TLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKGHK-EAISAVQWTAVDE-II-TSSWDHTLKIWDAE 81 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~-l~-s~~~d~~v~vwd~~ 81 (183)
..+++|+|+|. +.+.+ +.+|.+.. .........+..+. .....++|+|+++ ++ +...++.+.+|++.
T Consensus 143 ~~~~~~spdg~-l~v~~~~~~~v~~~~~~~----~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 143 IHYTDLTPDNR-LAVIDLGSDKVYVYNVSD----AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEEECTTSC-EEEEETTTTEEEEEEECT----TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEECCCCc-EEEEeCCCCEEEEEEECC----CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 56789999999 44443 44443320 01112222233332 3678899999987 44 45678999999987
Q ss_pred CCCCccCceeEEEeecCC------cceEEEEEecCCCCEE-EEEeCCCeEEEEeCCCC-C-cceEEeccCCCcEEEEEec
Q psy2113 82 LGGMKKGAIVKSTFSSHK------EWVQSVRWSPIDPQLF-VSASFDNSVKLWDLRSP-K-VPLFDMLGHEDKVMCVNWS 152 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~------~~v~~~~~~p~~~~~l-~~~~~dg~i~vwd~~~~-~-~~~~~~~~~~~~v~~~~~~ 152 (183)
..... ......+.... ..+..++|+| +++++ ++...++.|.+||+... . ..+..+..+...+..++|+
T Consensus 218 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 218 TQTGA--FTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp TTTTE--EEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred CCCCc--eEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence 52211 01122222222 4588999999 77755 66667899999999732 2 1244455556678999999
Q ss_pred CC-cEEEEecC-CCcEEEEEecC
Q psy2113 153 DY-RYIMSGGQ-DNSVRVFKTKH 173 (183)
Q Consensus 153 ~~-~~l~~~~~-dg~i~iwd~~~ 173 (183)
|+ ++|++++. ++.|.+|++..
T Consensus 295 pdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 295 PTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEEcCCCcEEEEEEeC
Confidence 76 66776665 58999996643
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.44 E-value=4.1e-11 Score=86.18 Aligned_cols=155 Identities=9% Similarity=0.054 Sum_probs=97.1
Q ss_pred eEEEEEeecCcEEEEEE-----eccCCCCcccccccCc----c-c------eEEEeccCCCeeEEEEccCCe-EEEEe-C
Q psy2113 10 TLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQK----T-P------LITLKGHKEAISAVQWTAVDE-IITSS-W 71 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~-~------~~~~~~h~~~v~~~~~~~~~~-l~s~~-~ 71 (183)
..+++|+|+|..+.+.+ +.+|.+. .... + . ......+......++|+|+++ +++++ .
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNIN-----PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEC-----TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEc-----CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 36789999999776655 3334322 1111 1 1 111223445678999999986 55555 6
Q ss_pred CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC--CCeEEEEeCC--CCCc-ceEEeccCCCcE
Q psy2113 72 DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF--DNSVKLWDLR--SPKV-PLFDMLGHEDKV 146 (183)
Q Consensus 72 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~--~~~~-~~~~~~~~~~~v 146 (183)
++.|.+|++.++.... .........+......++|+| ++++++++.. ++.|.+|++. +++. .+..... ...+
T Consensus 232 ~~~v~v~~~~~g~~~~-~~~~~~~~~~~~~~~~i~~sp-dg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~ 308 (361)
T 3scy_A 232 GGTVIAFRYADGMLDE-IQTVAADTVNAQGSGDIHLSP-DGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHP 308 (361)
T ss_dssp TCEEEEEEEETTEEEE-EEEEESCSSCCCCEEEEEECT-TSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCC
T ss_pred CCeEEEEEecCCceEE-eEEEecCCCCCCCcccEEECC-CCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCC
Confidence 8999999998543211 000111122334578999999 7877765554 5899999996 3332 1233333 4577
Q ss_pred EEEEecCC-cEEEEec-CCCcEEEEEec
Q psy2113 147 MCVNWSDY-RYIMSGG-QDNSVRVFKTK 172 (183)
Q Consensus 147 ~~~~~~~~-~~l~~~~-~dg~i~iwd~~ 172 (183)
..++|+|+ ++|++++ .++.|.+|++.
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 309 RNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred ceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 89999976 6677666 67899997665
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.44 E-value=5.6e-12 Score=102.30 Aligned_cols=149 Identities=6% Similarity=-0.042 Sum_probs=109.8
Q ss_pred eeEEEEEeecCcEEEEEEe--ccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTNI--EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~ 85 (183)
....++|+ +|..++...- .+|.+ .+... .....+.+|...+..++|+|++. |++++.++.+++||+.+++.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~----~d~~~-~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGI----YDYRT-GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEE----EETTT-CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEE----EECCC-CCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce
Confidence 44566777 7766665431 11100 01112 22334457888999999999876 78899999999999987764
Q ss_pred ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC----------eEEEEeCCCCCcceEEeccCCCcEEEEEecCC-
Q psy2113 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN----------SVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY- 154 (183)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----------~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~- 154 (183)
......|...+..++|+| +++++++++.++ .|++||+.+++ ...+..|...+..++|+|+
T Consensus 413 ------~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG 483 (1045)
T 1k32_A 413 ------TVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADS 483 (1045)
T ss_dssp ------EEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTS
T ss_pred ------EEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCC
Confidence 334557888999999999 888888876644 89999999875 5677788888999999965
Q ss_pred cEEEEecCCCcEEEEEec
Q psy2113 155 RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~ 172 (183)
.+|+.++.++...+|+..
T Consensus 484 ~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 484 KNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEESCCCCCEECSS
T ss_pred CEEEEEecccCCcCcchh
Confidence 788888888888888754
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.43 E-value=2.9e-12 Score=97.83 Aligned_cols=147 Identities=12% Similarity=0.043 Sum_probs=103.3
Q ss_pred EEEEEeecCcEEEEEEeccCC-CCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCC--eEEEEEcCCCCCc
Q psy2113 11 LGVIFMTVGALLTLTNIEVTS-LPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDH--TLKIWDAELGGMK 86 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~--~v~vwd~~~~~~~ 86 (183)
.+.+|+|+|+.++........ ...+..+...++ ...+..|.+.+..++|+|+|+ |+++..++ .|++||+.+++.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~- 230 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV- 230 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE-
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE-
Confidence 578899999998855422111 001111222333 347788889999999999987 67777788 899999987663
Q ss_pred cCceeEEEeecCCcceEEEE--------EecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEE
Q psy2113 87 KGAIVKSTFSSHKEWVQSVR--------WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM 158 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~--------~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~ 158 (183)
. .+..|...+..+. |+| ++.++++++.|+.+++|++ ++. .. .....+.+++|+++..++
T Consensus 231 -----~-~~~~~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~g~~~l~~~--g~~-~~---~~~~~v~~~~~sdg~~l~ 297 (582)
T 3o4h_A 231 -----E-DLELPSKDFSSYRPTAITWLGYLP-DGRLAVVARREGRSAVFID--GER-VE---APQGNHGRVVLWRGKLVT 297 (582)
T ss_dssp -----E-ECCCSCSHHHHHCCSEEEEEEECT-TSCEEEEEEETTEEEEEET--TEE-EC---CCSSEEEEEEEETTEEEE
T ss_pred -----E-EccCCCcChhhhhhccccceeEcC-CCcEEEEEEcCCcEEEEEE--CCe-ec---cCCCceEEEEecCCEEEE
Confidence 3 5566766666666 999 6689999999999999999 432 21 344678899999557777
Q ss_pred EecCCCc---EEEEEec
Q psy2113 159 SGGQDNS---VRVFKTK 172 (183)
Q Consensus 159 ~~~~dg~---i~iwd~~ 172 (183)
+++.+.. +.+||..
T Consensus 298 ~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 298 SHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp EEEETTEEEEEEEETTC
T ss_pred EEcCCCCCCeEEEEcCC
Confidence 7777644 5666654
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=2.5e-11 Score=86.81 Aligned_cols=155 Identities=11% Similarity=0.097 Sum_probs=100.3
Q ss_pred eEEEEEeecCcEEEEEE------eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEe-CCCeEEEEEcC
Q psy2113 10 TLGVIFMTVGALLTLTN------IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE 81 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~-~d~~v~vwd~~ 81 (183)
...++|+|+|.++++.. +.+|++ .....+.+..+..+...+..++|+|++. |++++ .++.+.+|++.
T Consensus 42 p~~~a~spdg~l~~~~~~~~~~~v~~~~~-----~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 42 PTYLALSAKDCLYSVDKEDDEGGIAAWQI-----DGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CCCEEECTTCEEEEEEEETTEEEEEEEEE-----ETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cceEEEccCCeEEEEEecCCCceEEEEEe-----cCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 44688999999554432 334432 1112234555566788899999999886 66666 78999999996
Q ss_pred CCCCccCceeEEEeec---------CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCC-CCCcc-eEEecc-CCCcEEEE
Q psy2113 82 LGGMKKGAIVKSTFSS---------HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR-SPKVP-LFDMLG-HEDKVMCV 149 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~---------~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~-~~~~~-~~~~~~-~~~~v~~~ 149 (183)
...... ....+.. +...+.+++|+| +++++++...++.|.+||+. +++.. ...... ....+..+
T Consensus 117 ~~g~~~---~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 117 ADGALT---LTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp TTSCEE---EEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred CCCCee---ecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 432211 1222211 123488999999 66777777778999999998 44321 111122 23467889
Q ss_pred EecCC-cEE-EEecCCCcEEEEEecC
Q psy2113 150 NWSDY-RYI-MSGGQDNSVRVFKTKH 173 (183)
Q Consensus 150 ~~~~~-~~l-~~~~~dg~i~iwd~~~ 173 (183)
+|+|+ +++ ++...++.|.+|++..
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecC
Confidence 99976 544 4567789999999885
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.41 E-value=7.6e-13 Score=103.27 Aligned_cols=142 Identities=17% Similarity=0.190 Sum_probs=94.2
Q ss_pred eeceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCC---CeeEEEEccCCe-EEEEeC-------
Q psy2113 6 FGILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKE---AISAVQWTAVDE-IITSSW------- 71 (183)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~-l~s~~~------- 71 (183)
|.....+..|+|++.+++... +.+| +...++....+..|.. .+.+++|+|+|+ |+.++.
T Consensus 14 ~~~~~~~~~~s~dg~~~~~~~d~~i~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~ 86 (719)
T 1z68_A 14 FSYKTFFPNWISGQEYLHQSADNNIVLY-------NIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRY 86 (719)
T ss_dssp TCCCCCCCEESSSSEEEEECTTSCEEEE-------ESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSS
T ss_pred ccCCCCccEECCCCeEEEEcCCCCEEEE-------EcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEe
Confidence 344445788999997665532 3333 3344555555555543 489999999987 666655
Q ss_pred --CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcE---
Q psy2113 72 --DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKV--- 146 (183)
Q Consensus 72 --d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v--- 146 (183)
++.+++||+.+++.... ..+ ...+..++|+| +++.|+.+. ++.|++||+.+++.......++...+
T Consensus 87 s~~~~i~~~d~~~g~~~~~----~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g 157 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVRG----NEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNG 157 (719)
T ss_dssp CEEEEEEEEETTTTEECCS----SCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEES
T ss_pred ecceEEEEEECCCCccccc----eec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcc
Confidence 68999999987653100 111 24588899999 888888875 78999999988764211122333322
Q ss_pred --------------EEEEecCC-cEEEEecCC
Q psy2113 147 --------------MCVNWSDY-RYIMSGGQD 163 (183)
Q Consensus 147 --------------~~~~~~~~-~~l~~~~~d 163 (183)
..++|+|+ +.|+.++.|
T Consensus 158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 48999976 788887765
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.40 E-value=4.8e-11 Score=84.68 Aligned_cols=155 Identities=7% Similarity=0.118 Sum_probs=95.4
Q ss_pred eEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceE--EEec-cCCCeeEEEEccCCe-EE-EEeCCCeEEEEE
Q psy2113 10 TLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLI--TLKG-HKEAISAVQWTAVDE-II-TSSWDHTLKIWD 79 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~-h~~~v~~~~~~~~~~-l~-s~~~d~~v~vwd 79 (183)
+.+++|+|++..+.+.. +.+|++.. ........ .+.. ....+..++|+|++. ++ ++..++.+.+|+
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFTVSD----DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEEECT----TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEEecC----CCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 45678999998777654 44443321 01111111 2333 334788999999886 54 455889999999
Q ss_pred cCCCCCccCceeEEEee---cC---CcceEEEEEecCCCCEEE-EEeCCCeEEEEeCCC--CCc-ceEEeccCCCcEEEE
Q psy2113 80 AELGGMKKGAIVKSTFS---SH---KEWVQSVRWSPIDPQLFV-SASFDNSVKLWDLRS--PKV-PLFDMLGHEDKVMCV 149 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~---~~---~~~v~~~~~~p~~~~~l~-~~~~dg~i~vwd~~~--~~~-~~~~~~~~~~~v~~~ 149 (183)
+....... ....... .. ...+..++|+| ++++++ ++..++.|.+||+.. +.. .+..+..+.. +..+
T Consensus 207 ~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~ 282 (343)
T 1ri6_A 207 LKDPHGNI--ECVQTLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGF 282 (343)
T ss_dssp SSCTTSCC--EEEEEEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCE
T ss_pred ecCCCCcE--EEEeeccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceE
Confidence 96422111 0111111 11 23567899999 666555 555789999999983 221 1333434433 8899
Q ss_pred EecCC-cEEEEec-CCCcEEEEEec
Q psy2113 150 NWSDY-RYIMSGG-QDNSVRVFKTK 172 (183)
Q Consensus 150 ~~~~~-~~l~~~~-~dg~i~iwd~~ 172 (183)
+|+++ .++++++ .++.|.+|++.
T Consensus 283 ~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 283 NVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEecCCCCeEEEEEEc
Confidence 99965 6676666 68999999665
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.40 E-value=5.7e-12 Score=98.14 Aligned_cols=156 Identities=12% Similarity=0.182 Sum_probs=100.4
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCCC--------------eeEEEEccCCe-EEEEe-
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKEA--------------ISAVQWTAVDE-IITSS- 70 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~--------------v~~~~~~~~~~-l~s~~- 70 (183)
..+++|+|+|..++... +.+|++... .....+.......+... +.++.|+|+++ |++++
T Consensus 123 ~~~~~~SpdG~~la~~~~~~i~v~~~~~~--~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~ 200 (706)
T 2z3z_A 123 TASLDFSPVGDRVAYVRNHNLYIARGGKL--GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRM 200 (706)
T ss_dssp CTTCEECTTSSEEEEEETTEEEEEECBCT--TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEE
T ss_pred ccCCcCCCCCCEEEEEECCeEEEEecCcc--cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEE
Confidence 34578999999887754 444433210 00002222222223332 58999999987 66666
Q ss_pred --------------------------------CCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEE
Q psy2113 71 --------------------------------WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 118 (183)
Q Consensus 71 --------------------------------~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 118 (183)
.+..|++||+.+++... ......|...+..++|+| +++.++++
T Consensus 201 d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~----~~~~~~~~~~~~~~~~sp-dg~~l~~~ 275 (706)
T 2z3z_A 201 DQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVY----LQTGEPKEKFLTNLSWSP-DENILYVA 275 (706)
T ss_dssp ECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEE----CCCCSCTTCEEEEEEECT-TSSEEEEE
T ss_pred CCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEe----eccCCCCceeEeeEEEEC-CCCEEEEE
Confidence 44689999998765311 111124667899999999 88888887
Q ss_pred eCCC-----eEEEEeCCCCCcceEEec-cCCC---cEEEEEecC--C-cEEEEecCCCcEEEEEec
Q psy2113 119 SFDN-----SVKLWDLRSPKVPLFDML-GHED---KVMCVNWSD--Y-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 119 ~~dg-----~i~vwd~~~~~~~~~~~~-~~~~---~v~~~~~~~--~-~~l~~~~~dg~i~iwd~~ 172 (183)
+.++ .|++||+.+++....... .+.. .+..+.|+| + .+++++..||.+++|++.
T Consensus 276 ~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 276 EVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 7665 999999998843122221 2222 246789998 6 788888899999999886
No 155
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.39 E-value=3.3e-11 Score=87.47 Aligned_cols=147 Identities=16% Similarity=0.065 Sum_probs=104.0
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccccc----cCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCC
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQLI----LQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL 82 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~ 82 (183)
+..+++++...++++++ +.+|......... ...++.... .+.. |+.++| .+..|+++ .++.|++||+++
T Consensus 40 ~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f-d~~~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF-HGDQVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE-ETTEEEEE-ESSEEEEEESSS
T ss_pred ccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE-CCCEEEEE-cCCcEEEEEchh
Confidence 56678888888888776 4445433322100 001222233 3556 999999 55557776 889999999987
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecC
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQ 162 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~ 162 (183)
... ......|...+.++.+.+ . .++++..||.+.+||+.++.. .. +...|.+++|+|.. ++.|..
T Consensus 116 l~~------~~~~~~~~~~v~~i~~~~-p--~~av~~~dG~L~v~dl~~~~~-~~----~~~~Vs~v~WSpkG-~~vg~~ 180 (388)
T 1xip_A 116 LSE------FRTVTSFEKPVFQLKNVN-N--TLVILNSVNDLSALDLRTKST-KQ----LAQNVTSFDVTNSQ-LAVLLK 180 (388)
T ss_dssp TTC------EEEEEECSSCEEEEEECS-S--EEEEEETTSEEEEEETTTCCE-EE----EEESEEEEEECSSE-EEEEET
T ss_pred hhc------cCccceeecceeeEEecC-C--CEEEEECCCCEEEEEccCCcc-cc----ccCCceEEEEcCCc-eEEEEc
Confidence 653 334556777788887765 2 388889999999999997764 22 45689999999877 788999
Q ss_pred CCcEEEEEecCCC
Q psy2113 163 DNSVRVFKTKHQP 175 (183)
Q Consensus 163 dg~i~iwd~~~~~ 175 (183)
||++++|+....+
T Consensus 181 dg~i~~~~~~~~~ 193 (388)
T 1xip_A 181 DRSFQSFAWRNGE 193 (388)
T ss_dssp TSCEEEEEEETTE
T ss_pred CCcEEEEcCCCcc
Confidence 9999999887665
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.39 E-value=1.1e-10 Score=82.76 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=96.4
Q ss_pred EEeecCcEEEEEE-----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEe-CCCeEEEEEcCCCCCc
Q psy2113 14 IFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGGMK 86 (183)
Q Consensus 14 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~-~d~~v~vwd~~~~~~~ 86 (183)
.|.+++..+.+.+ +.+| +....+.+..+..+.... .++|+|++. +++++ .++.|.+||..+++..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~-------d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFF-------STDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK 75 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEE-------ETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE
T ss_pred eEcCCCCEEEEEecCCCeEEEE-------eCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee
Confidence 4555555554443 4444 333455556666666667 999999876 55544 4899999999876531
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC---eEEEEeCCCCCcceEEeccCCCcEEEEEecCC-c-EEEEec
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN---SVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R-YIMSGG 161 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~ 161 (183)
...+..+..+..+++|+| ++++++++..++ .|.+||+.+++. ...+.. ...+..++|+|+ + .+++..
T Consensus 76 -----~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 76 -----VVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKF-ISTIPI-PYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp -----EEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEE-EEEEEC-CTTEEEEEECTTSSCEEEEEE
T ss_pred -----EEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCe-EEEEEC-CCCccceEECCCCCEEEEEec
Confidence 234445555555599999 788888555553 999999998764 444443 445689999976 4 445556
Q ss_pred CCCc-EEEEEecCCC
Q psy2113 162 QDNS-VRVFKTKHQP 175 (183)
Q Consensus 162 ~dg~-i~iwd~~~~~ 175 (183)
.++. |.+|++....
T Consensus 148 ~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 148 SSANTVRRFKIDADG 162 (331)
T ss_dssp TTTTEEEEEEECTTC
T ss_pred CCCceEEEEEECCCC
Confidence 6688 9999987543
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=2.6e-11 Score=86.39 Aligned_cols=160 Identities=15% Similarity=0.127 Sum_probs=97.2
Q ss_pred eEEEEEeecCcEEEEEEec--c----C---CCCcccccccC---ccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEE
Q psy2113 10 TLGVIFMTVGALLTLTNIE--V----T---SLPSFFQLILQ---KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKI 77 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~--~----~---~~~~~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~v 77 (183)
..+++|+|+|..+++.... . + .-.....+... .+.+..+. +...+.+++|+|++.+++++. .|.+
T Consensus 94 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~l~~~~~--~i~~ 170 (349)
T 1jmx_B 94 MYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGSLYVAGP--DIYK 170 (349)
T ss_dssp SSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSCEEEESS--SEEE
T ss_pred ccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCcEEEccC--cEEE
Confidence 5678999999888776521 0 0 00000111122 22333443 334688999999888666543 4999
Q ss_pred EEcCCCCCccCce-----------------------------eE---------------------------------EEe
Q psy2113 78 WDAELGGMKKGAI-----------------------------VK---------------------------------STF 95 (183)
Q Consensus 78 wd~~~~~~~~~~~-----------------------------~~---------------------------------~~~ 95 (183)
||..+++...... +. ..+
T Consensus 171 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (349)
T 1jmx_B 171 MDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF 250 (349)
T ss_dssp ECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEE
T ss_pred EeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEeccc
Confidence 9987765321000 00 000
Q ss_pred ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCC
Q psy2113 96 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 96 ~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 174 (183)
..+...+..++++|.++++++++ ++.|.+||+.+++. ...+. ....+.+++|+++ ++|++++.++.|.+||+++.
T Consensus 251 ~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~-~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 251 ADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKL-IKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTL 326 (349)
T ss_dssp EECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEE-EEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTT
T ss_pred ccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeE-EEEEc-CCCCccceEECCCCCEEEEecCCCeEEEEecccc
Confidence 00112455677778345566666 78999999998764 33333 3345778999965 77888888999999999876
Q ss_pred CC
Q psy2113 175 PK 176 (183)
Q Consensus 175 ~~ 176 (183)
+.
T Consensus 327 ~~ 328 (349)
T 1jmx_B 327 EK 328 (349)
T ss_dssp EE
T ss_pred ce
Confidence 54
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.34 E-value=1.1e-09 Score=76.17 Aligned_cols=150 Identities=12% Similarity=0.187 Sum_probs=100.1
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEe--ccCCCeeEEEEccCCeE-EEEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLK--GHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~l-~s~~~d~~v~vwd~~ 81 (183)
...++++++++.++.+.. +..++. ..+.+..+. .+...+.++++++++.+ ++...++.|++||..
T Consensus 122 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~--------~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 193 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECKVMRVIIFDQ--------NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE 193 (286)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT--------TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEcC--------CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC
Confidence 356788999998666532 333321 233344443 34557899999998875 555678999999975
Q ss_pred CCCCccCceeEEEeecC--CcceEEEEEecCCCCEEEEEeCCC-eEEEEeCCCCCcceEEeccCC--CcEEEEEecCCcE
Q psy2113 82 LGGMKKGAIVKSTFSSH--KEWVQSVRWSPIDPQLFVSASFDN-SVKLWDLRSPKVPLFDMLGHE--DKVMCVNWSDYRY 156 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~--~~~v~~~~~~p~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 156 (183)
... ...+..+ ...+..++++| +++++++...++ .|.+||.. ++. +..+..+. ..+..++++++..
T Consensus 194 g~~-------~~~~~~~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~~i~~~~~g~ 263 (286)
T 1q7f_A 194 GQY-------LRQIGGEGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQD-GQL-ISALESKVKHAQCFDVALMDDGS 263 (286)
T ss_dssp CCE-------EEEESCTTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTT-SCE-EEEEEESSCCSCEEEEEEETTTE
T ss_pred CCE-------EEEEccCCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCC-CCE-EEEEcccCCCCcceeEEECCCCc
Confidence 322 3333322 35789999999 788888887776 99999964 333 44444333 3478999997644
Q ss_pred EEEecCCCcEEEEEecCCCC
Q psy2113 157 IMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 157 l~~~~~dg~i~iwd~~~~~~ 176 (183)
++.++.|+.|++|++.....
T Consensus 264 l~vs~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 264 VVLASKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEEETTTEEEEEECSCCCC
T ss_pred EEEECCCCeEEEEEcccccc
Confidence 44446799999999876543
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.33 E-value=8.2e-11 Score=84.94 Aligned_cols=160 Identities=6% Similarity=-0.042 Sum_probs=97.6
Q ss_pred eeEEEEEeecCcEEEEEE-----eccCCCCcccccccCccceEEEe--ccCCCeeEEEEccCCe-EEEEe-CCCeEEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTN-----IEVTSLPSFFQLILQKTPLITLK--GHKEAISAVQWTAVDE-IITSS-WDHTLKIWD 79 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~-l~s~~-~d~~v~vwd 79 (183)
...+++|+|+|..+.+.+ +.+|.+.. ......+..+. .|...+..++|+|+++ +++++ .++.+.+|+
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~----~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLA----SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECT----TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred cceEEEECCCCCEEEEEcCCCCEEEEEEECC----CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 466889999999887765 33332210 11112223333 2456789999999986 55555 478999998
Q ss_pred cCC--CCCccCceeEEEee----cCCc------ceEEEE-EecCCCCEEEEEeCC-C-----eEEEEeCC-CCCcceE--
Q psy2113 80 AEL--GGMKKGAIVKSTFS----SHKE------WVQSVR-WSPIDPQLFVSASFD-N-----SVKLWDLR-SPKVPLF-- 137 (183)
Q Consensus 80 ~~~--~~~~~~~~~~~~~~----~~~~------~v~~~~-~~p~~~~~l~~~~~d-g-----~i~vwd~~-~~~~~~~-- 137 (183)
+.. ++..........+. +|.. .+..++ |+| ++++++++..+ . .|.+|++. +++. ..
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~-~~~~ 299 (365)
T 1jof_A 222 IDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSI-EKQL 299 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCE-EEEE
T ss_pred EeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCE-EEee
Confidence 753 32110000011111 1222 588999 999 78777665532 3 89999996 4442 21
Q ss_pred -EeccCCCcEEEEEecC----CcEEEEecC-CCcEEEEEecCC
Q psy2113 138 -DMLGHEDKVMCVNWSD----YRYIMSGGQ-DNSVRVFKTKHQ 174 (183)
Q Consensus 138 -~~~~~~~~v~~~~~~~----~~~l~~~~~-dg~i~iwd~~~~ 174 (183)
....+...+..++|+| +++|++++. ++.|.+|++...
T Consensus 300 ~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 300 FLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred eeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 1333444566788887 588888876 489999998764
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.32 E-value=3.5e-11 Score=85.68 Aligned_cols=148 Identities=10% Similarity=0.016 Sum_probs=97.2
Q ss_pred EEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccC-CCeeEEEEccCCe-E-EEEeCCCeEEEEEcCCCC
Q psy2113 12 GVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHK-EAISAVQWTAVDE-I-ITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 12 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~~~~ 84 (183)
++++++++.++++.. +.+| +....+.+..+..+. ..+..++|+|++. + ++...++.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~-------d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVV-------DVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEE-------ETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEE-------ECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 445667777666654 4444 333455555665443 2578999999875 4 456678999999998765
Q ss_pred CccCceeEEEeec-C-----CcceEEEEEecCCCCEEEEEeCC------------CeEEEEeCCCCCc--ceEEeccCCC
Q psy2113 85 MKKGAIVKSTFSS-H-----KEWVQSVRWSPIDPQLFVSASFD------------NSVKLWDLRSPKV--PLFDMLGHED 144 (183)
Q Consensus 85 ~~~~~~~~~~~~~-~-----~~~v~~~~~~p~~~~~l~~~~~d------------g~i~vwd~~~~~~--~~~~~~~~~~ 144 (183)
. ...+.. + ...+..++|+| +++++++++.+ +.|.+||+.+++. ...... +..
T Consensus 77 ~------~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~ 148 (349)
T 1jmx_B 77 N------TFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPR 148 (349)
T ss_dssp E------EEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCS
T ss_pred E------EEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCC
Confidence 3 223332 2 23377899999 78888888765 8999999987432 122332 334
Q ss_pred cEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 145 KVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 145 ~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+.+++|+|+..+++++ +.|.+||+.+++.
T Consensus 149 ~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 149 QVYLMRAADDGSLYVAG--PDIYKMDVKTGKY 178 (349)
T ss_dssp SCCCEEECTTSCEEEES--SSEEEECTTTCCE
T ss_pred cccceeECCCCcEEEcc--CcEEEEeCCCCce
Confidence 68889999763366654 3499999887653
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.31 E-value=1.4e-09 Score=78.13 Aligned_cols=162 Identities=11% Similarity=0.025 Sum_probs=96.5
Q ss_pred EEEEEeecCcEEEEEEec---cCCCCccccccc--CccceEEEeccCCCeeEEEEccCCeEEEEe-CCCeEEEEEcCCCC
Q psy2113 11 LGVIFMTVGALLTLTNIE---VTSLPSFFQLIL--QKTPLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGG 84 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~-~d~~v~vwd~~~~~ 84 (183)
..++|+|++..+.+.+.. ...+..+..+.. ..+.+.....+......+++ .+..+++++ .++.+.+|++....
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCC
Confidence 457899999987776532 011111111111 12334444445566777888 444455554 68899999997543
Q ss_pred CccCceeEEEeec--------CCcceEEEEEecCCCCEE-EEEeCCCeEEEEeCCCCCc------c------eEEeccCC
Q psy2113 85 MKKGAIVKSTFSS--------HKEWVQSVRWSPIDPQLF-VSASFDNSVKLWDLRSPKV------P------LFDMLGHE 143 (183)
Q Consensus 85 ~~~~~~~~~~~~~--------~~~~v~~~~~~p~~~~~l-~~~~~dg~i~vwd~~~~~~------~------~~~~~~~~ 143 (183)
............+ +...+++++|+| +++++ ++...++.|.+|++..... . ........
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 210 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG 210 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC
Confidence 3221111111111 223468899999 77755 4455588999998875431 1 12223445
Q ss_pred CcEEEEEecCC-cEEEEec-CCCcEEEEEecCC
Q psy2113 144 DKVMCVNWSDY-RYIMSGG-QDNSVRVFKTKHQ 174 (183)
Q Consensus 144 ~~v~~~~~~~~-~~l~~~~-~dg~i~iwd~~~~ 174 (183)
..+..++|+|+ +++++++ .++.|.+||+.++
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 56789999976 6666655 6899999999854
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.29 E-value=7.5e-11 Score=91.24 Aligned_cols=149 Identities=13% Similarity=0.061 Sum_probs=97.1
Q ss_pred eecCcE-EEEEEeccCCCCccccccc-Cc-cceEEEec-----cCCCeeEEEEccCCe-EEEEeCC----------CeEE
Q psy2113 16 MTVGAL-LTLTNIEVTSLPSFFQLIL-QK-TPLITLKG-----HKEAISAVQWTAVDE-IITSSWD----------HTLK 76 (183)
Q Consensus 16 ~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~-----h~~~v~~~~~~~~~~-l~s~~~d----------~~v~ 76 (183)
||+|.. ++...-....+. ..+.. .. .....+.. |...+..++|+|+++ |+.++.+ ..|+
T Consensus 87 SPDg~~~la~~~~~~~~l~--~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLY--AFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEE--EECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEE--EEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 499988 776542211111 11111 01 23345555 566788999999886 7777665 5899
Q ss_pred EEEcCC------CCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeCC--------CeEEEEeCC-CCC--cceEE
Q psy2113 77 IWDAEL------GGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFD--------NSVKLWDLR-SPK--VPLFD 138 (183)
Q Consensus 77 vwd~~~------~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~d--------g~i~vwd~~-~~~--~~~~~ 138 (183)
+||+.+ +. ...+. .+...+..++|+| +++.|+.++.+ ..|++||+. ++. .....
T Consensus 165 ~~~~~~~~~~~~~~-------~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 165 AVPLDGSAAADRSA-------VRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp EEETTSTTTTCGGG-------SEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred EEECCCCccccCCc-------eeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 999976 33 22344 5566788899999 88888877654 379999998 451 21333
Q ss_pred eccCCCcEEEEEecCC-cEEEEecCCC--cEEEEEecCC
Q psy2113 139 MLGHEDKVMCVNWSDY-RYIMSGGQDN--SVRVFKTKHQ 174 (183)
Q Consensus 139 ~~~~~~~v~~~~~~~~-~~l~~~~~dg--~i~iwd~~~~ 174 (183)
...+...+..+.|+|+ ++++++..++ .|.+||+.++
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence 4455788999999965 7777888888 4555555443
No 163
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.27 E-value=2.7e-10 Score=80.58 Aligned_cols=124 Identities=10% Similarity=0.031 Sum_probs=86.5
Q ss_pred CccceEEEeccCC--CeeEEEEccCCe-E-EEEeCCCeEEEEEcCCCCCccCceeEEEeec-C----CcceEEEEEecCC
Q psy2113 41 QKTPLITLKGHKE--AISAVQWTAVDE-I-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSS-H----KEWVQSVRWSPID 111 (183)
Q Consensus 41 ~~~~~~~~~~h~~--~v~~~~~~~~~~-l-~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~-~----~~~v~~~~~~p~~ 111 (183)
..+.+..+..... .+..++|+|++. + ++++.++.|.+||+.+++. ...+.. + ...+..++|+| +
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~s~-d 92 (337)
T 1pby_B 20 KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET------LGRIDLSTPEERVKSLFGAALSP-D 92 (337)
T ss_dssp TTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE------EEEEECCBTTEEEECTTCEEECT-T
T ss_pred CCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe------EeeEEcCCcccccccccceEECC-C
Confidence 3444555543221 478999999874 4 5666789999999987664 223321 1 22567899999 7
Q ss_pred CCEEEEEe------------CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 112 PQLFVSAS------------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 112 ~~~l~~~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
++.++++. .++.|.+||+.+++. ...+.. ...+..++|+|+ .+++++ ++.|.+||+++++
T Consensus 93 g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 93 GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR-RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE-EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTE
T ss_pred CCEEEEEecccccccccccccCceEEEEECCCCcE-EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 87777775 579999999988764 434433 456788899966 667666 6899999998764
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.27 E-value=2.1e-10 Score=88.77 Aligned_cols=160 Identities=11% Similarity=0.073 Sum_probs=99.9
Q ss_pred eceeEEEEEeecCcEEEEEEeccC------C-CCcccccccCc-----cceEEEe-ccCCCeeEEEEccCCe-EEEEeCC
Q psy2113 7 GILTLGVIFMTVGALLTLTNIEVT------S-LPSFFQLILQK-----TPLITLK-GHKEAISAVQWTAVDE-IITSSWD 72 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~-----~~~~~~~-~h~~~v~~~~~~~~~~-l~s~~~d 72 (183)
+....+++|+|+|..++....... . ......+.... .....+. .+...+..+.|+|+|+ |+.++.+
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred CccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 345678899999998876542210 0 00011122220 2334555 5667788899999987 6656544
Q ss_pred --------CeEEEEEcC-CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC--eEEEEeCCCCCcceEEecc
Q psy2113 73 --------HTLKIWDAE-LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN--SVKLWDLRSPKVPLFDMLG 141 (183)
Q Consensus 73 --------~~v~vwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~ 141 (183)
..|++||+. ++.... .......+...+..+.|+| ++++++++..++ .|.+||..+++. ......
T Consensus 209 ~~~~~~~~~~i~~~d~~~~g~~~~---~~~l~~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~~~~~~~~-~~l~~~ 283 (662)
T 3azo_A 209 HPRMPWEGTELKTARVTEDGRFAD---TRTLLGGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRVDPATGAA-TQLCRR 283 (662)
T ss_dssp TTCCTTTCEEEEEEEECTTSCEEE---EEEEEEETTBCEEEEEECT-TSCEEEEECTTSSCEEEEECTTTCCE-EESSCC
T ss_pred CCCCCCCCcEEEEEEECCCCcccc---cEEeCCCCCceEcceEECC-CCeEEEEECCCCCeEEEEEECCCCce-eecccc
Confidence 479999998 341100 1223344578899999999 777888888888 677777766553 222222
Q ss_pred CCCc--------EEEEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 142 HEDK--------VMCVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 142 ~~~~--------v~~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
+... +..++|+++ .+++++.. +.+++|.+.
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 2221 467888855 77888888 999999544
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.26 E-value=5.7e-10 Score=80.53 Aligned_cols=154 Identities=9% Similarity=0.016 Sum_probs=96.8
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEec-cCCCeeEEEEccCCe--EE-EEe------------
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKG-HKEAISAVQWTAVDE--II-TSS------------ 70 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~--l~-s~~------------ 70 (183)
...++|+|++..+.+.+ +.+|.+. ..++....... ..+....++|+|+++ ++ ++.
T Consensus 42 ~~~~a~spdg~~l~~~~~~~v~~~~~~------~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMKKWSSFAVK------SPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CSEEEECTTSSEEEEEEBTEEEEEEEE------ETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CcEEEECCCCCEEEEEccceEEEEEEC------CCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 45789999999877665 3333321 12332222211 113356788999987 33 442
Q ss_pred -CCCeEEEEEcCC-CCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEe-CCCeEEEEeCC-CCCcc-eEEec--cC
Q psy2113 71 -WDHTLKIWDAEL-GGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR-SPKVP-LFDML--GH 142 (183)
Q Consensus 71 -~d~~v~vwd~~~-~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~vwd~~-~~~~~-~~~~~--~~ 142 (183)
.++.+.+|++.. ++... ....+. .+...+.+++|+| ++++++++. .++.|++||+. +++.. ..... .+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEK---NVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp SSCCEEEEEEECTTCCEEE---EEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred cCCceEEEEccCCCCcCcc---eEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 689999999974 33211 011111 2456799999999 787777665 46799999998 66531 12222 24
Q ss_pred CCcEEEEEecCC-cEEEEec-CCCcEEEEEecC
Q psy2113 143 EDKVMCVNWSDY-RYIMSGG-QDNSVRVFKTKH 173 (183)
Q Consensus 143 ~~~v~~~~~~~~-~~l~~~~-~dg~i~iwd~~~ 173 (183)
...+..++|+|+ +++++++ .++.|.+|++..
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 224 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeC
Confidence 567899999976 6776665 478999998763
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.23 E-value=7.2e-11 Score=92.67 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=95.3
Q ss_pred eceeEEEEEeecCcEEEEEE--eccCCCCcccccccCccceEEEeccCCC-----eeEEEEccCCe-EEEEeCC------
Q psy2113 7 GILTLGVIFMTVGALLTLTN--IEVTSLPSFFQLILQKTPLITLKGHKEA-----ISAVQWTAVDE-IITSSWD------ 72 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~~~~~~~~~-l~s~~~d------ 72 (183)
.....++.|+|++.+++..+ +.+| +...++....+.+|... ...+.|+|+++ ++.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQENNILVF-------NAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCCEEECSSSEEEEEETTEEEEE-------ETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSS
T ss_pred cccccccEECCCCcEEEEcCCcEEEE-------ECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEE
Confidence 33455789999998887753 4444 33455555666776543 23478899987 6666654
Q ss_pred ---CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcE---
Q psy2113 73 ---HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKV--- 146 (183)
Q Consensus 73 ---~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v--- 146 (183)
+.+.+||+.+++. ..+..+...+...+|+| +++.|+.+. |+.|++||..++........++...+
T Consensus 89 ~~~~~~~~~d~~~~~~-------~~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g 159 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQL-------ITEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNG 159 (740)
T ss_dssp CEEEEEEEEETTTTEE-------CCSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEES
T ss_pred ccceEEEEEECCCCcE-------EEcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecC
Confidence 5677999988763 24556778899999999 888888774 78999999988764222222333323
Q ss_pred --------------EEEEecCC-cEEEEecC
Q psy2113 147 --------------MCVNWSDY-RYIMSGGQ 162 (183)
Q Consensus 147 --------------~~~~~~~~-~~l~~~~~ 162 (183)
..+.|+|+ +.|+..+.
T Consensus 160 ~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 160 ITDWVYEEEVFSAYSALWWSPNGTFLAYAQF 190 (740)
T ss_dssp BCCHHHHHHTSSSSBCEEECTTSSEEEEEEE
T ss_pred cccccccchhcCCCcceEECCCCCEEEEEEE
Confidence 24889976 77777653
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.21 E-value=1.2e-09 Score=79.10 Aligned_cols=153 Identities=10% Similarity=-0.001 Sum_probs=99.0
Q ss_pred EEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCcee
Q psy2113 13 VIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIV 91 (183)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~ 91 (183)
.+|+|+|..++...-.-........+....+......++...+..+.|+|++. |+.++.++.+++||+.+++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~------ 114 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEE------ 114 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCE------
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcc------
Confidence 57999999887765321111111123334444444455555666788999886 88888889999999988764
Q ss_pred EEEeecCCcceEEEE--EecCCCCEEEEE----------------------eCCCeEEEEeCCCCCcceEEeccCCCcEE
Q psy2113 92 KSTFSSHKEWVQSVR--WSPIDPQLFVSA----------------------SFDNSVKLWDLRSPKVPLFDMLGHEDKVM 147 (183)
Q Consensus 92 ~~~~~~~~~~v~~~~--~~p~~~~~l~~~----------------------~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 147 (183)
......+...+.... ++| ++.+++.. ..+..|.+||+.+++ ...+..+...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--~~~l~~~~~~~~ 191 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--STVILQENQWLG 191 (388)
T ss_dssp EEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--EEEEEEESSCEE
T ss_pred eeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--eEEeecCCcccc
Confidence 233444444444333 478 77777642 234689999999886 445556677889
Q ss_pred EEEecC-C-cEEEEecCC------CcEEEEEecCC
Q psy2113 148 CVNWSD-Y-RYIMSGGQD------NSVRVFKTKHQ 174 (183)
Q Consensus 148 ~~~~~~-~-~~l~~~~~d------g~i~iwd~~~~ 174 (183)
.+.|+| + ..|+....+ ..|.++|+...
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 999999 6 666655543 36777776554
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.19 E-value=5.5e-11 Score=92.86 Aligned_cols=109 Identities=17% Similarity=0.228 Sum_probs=82.9
Q ss_pred eEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCc---ceEEEEEecCCCCEEEEEeC---------CCe
Q psy2113 56 SAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE---WVQSVRWSPIDPQLFVSASF---------DNS 123 (183)
Q Consensus 56 ~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~p~~~~~l~~~~~---------dg~ 123 (183)
.++.|+|++.++..+.|+.|++||+.+++. ...+..+.. .+.+++|+| ++++|+.++. ++.
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~ 91 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQS------YTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTAT 91 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCE------EEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEE
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcE------EEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceE
Confidence 378999999988777899999999988764 333333332 389999999 8888888876 689
Q ss_pred EEEEeCCCCCcce-EEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 124 VKLWDLRSPKVPL-FDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 124 i~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
|++||+.+++... ..+ ...+..++|+|+ +.|+.+. |+.|++||+.+++
T Consensus 92 i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp EEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred EEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCC
Confidence 9999998875300 112 246888999976 6777764 7899999997765
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.18 E-value=1.9e-08 Score=71.54 Aligned_cols=160 Identities=12% Similarity=0.009 Sum_probs=103.0
Q ss_pred eeEEEEEeecCcEEEEEE-eccCCC--------------------CcccccccCccceEEEe-ccCCCeeEEEEccCCe-
Q psy2113 9 LTLGVIFMTVGALLTLTN-IEVTSL--------------------PSFFQLILQKTPLITLK-GHKEAISAVQWTAVDE- 65 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~-~~~~~~--------------------~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~- 65 (183)
...+++++|+|.++++.. -+.|.. .....+...++.+..+. ++......+++++++.
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 467899999999887654 211211 01111222333333332 3345788999998877
Q ss_pred EEEEeCCCeEEEEEcCCCCCccCceeEEEe---------ecCCcceEEEEEecCCCCEEEEEe-CCCeEEEEeCCCCCcc
Q psy2113 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTF---------SSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLRSPKVP 135 (183)
Q Consensus 66 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~vwd~~~~~~~ 135 (183)
+++...++.|++||....... ...+ ..+-.....++++|+++.++++.+ .++.|++||. ++..
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~-----~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~- 177 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGP-----LLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF- 177 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCC-----SEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE-
T ss_pred EEEECCCCEEEEEeCCCCeEE-----EEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE-
Confidence 566677899999998644210 2222 234446899999996677888876 6899999994 4443
Q ss_pred eEEecc----------CCCcEEEEEecCC--cEEEEecCCCcEEEEEecCCC
Q psy2113 136 LFDMLG----------HEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 136 ~~~~~~----------~~~~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...+.. +-..+..++++++ .++++...++.|++||..+++
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~ 229 (329)
T 3fvz_A 178 VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE 229 (329)
T ss_dssp EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc
Confidence 333322 2234899999864 666777788999999988543
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.13 E-value=3.2e-10 Score=89.01 Aligned_cols=112 Identities=16% Similarity=0.249 Sum_probs=85.3
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcc-----eEEEEEecCCCCEEEEEeCC------
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW-----VQSVRWSPIDPQLFVSASFD------ 121 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~p~~~~~l~~~~~d------ 121 (183)
....++.|+|++.++..+ |+.|++||+.+++. ...+.+|... ...++|+| +++.++.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~ 88 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNS------SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRH 88 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEEEETTTCCE------EEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSS
T ss_pred ccccccEECCCCcEEEEc-CCcEEEEECCCCce------EEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEE
Confidence 346689999999865555 99999999988774 3345555432 24478999 88888888775
Q ss_pred ---CeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 122 ---NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 122 ---g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+.+.+||+.+++. ..+..+...+...+|+|+ +.|+.+ .|+.|++||+.+++
T Consensus 89 ~~~~~~~~~d~~~~~~--~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 89 SYTASYDIYDLNKRQL--ITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP 143 (740)
T ss_dssp CEEEEEEEEETTTTEE--CCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC
T ss_pred ccceEEEEEECCCCcE--EEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc
Confidence 5677999998863 456677788999999976 667666 57899999987754
No 171
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.12 E-value=5e-09 Score=76.10 Aligned_cols=127 Identities=13% Similarity=0.129 Sum_probs=90.7
Q ss_pred eEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCc
Q psy2113 10 TLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 86 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~ 86 (183)
...++| ++..++++. +++|++..+ ........|...+.++.+.+.+ +++++.||.+.+||+.+...
T Consensus 90 V~~l~f--d~~~L~v~~~~~l~v~dv~sl-------~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~- 158 (388)
T 1xip_A 90 VIFVCF--HGDQVLVSTRNALYSLDLEEL-------SEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKST- 158 (388)
T ss_dssp EEEEEE--ETTEEEEEESSEEEEEESSST-------TCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCE-
T ss_pred eeEEEE--CCCEEEEEcCCcEEEEEchhh-------hccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcc-
Confidence 567778 888888765 555544332 2233455677788888887543 88999999999999986653
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc-eEEe------c---cCCCcEEEEEecCC-c
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP-LFDM------L---GHEDKVMCVNWSDY-R 155 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~------~---~~~~~v~~~~~~~~-~ 155 (183)
. . +...|+|++|+| .+ ++.|..||.+++|+....... ...+ . +|...|.+|.|.++ .
T Consensus 159 -----~-~---~~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 159 -----K-Q---LAQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp -----E-E---EEESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred -----c-c---ccCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 1 1 345799999999 66 677889999999988776521 2223 2 36788999999965 5
Q ss_pred EEEE
Q psy2113 156 YIMS 159 (183)
Q Consensus 156 ~l~~ 159 (183)
++++
T Consensus 227 flv~ 230 (388)
T 1xip_A 227 FLAV 230 (388)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.08 E-value=1.8e-07 Score=66.58 Aligned_cols=149 Identities=12% Similarity=0.080 Sum_probs=101.6
Q ss_pred eeEEEEEee-cCcEEEEEE-----eccCCCCcccccccCccceEEEec----------cCCCeeEEEEccC-Ce-EEEEe
Q psy2113 9 LTLGVIFMT-VGALLTLTN-----IEVTSLPSFFQLILQKTPLITLKG----------HKEAISAVQWTAV-DE-IITSS 70 (183)
Q Consensus 9 ~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~-~~-l~s~~ 70 (183)
...+++++| ++.++.+.. +..++ ..+..+..+.. +.....+++++|+ +. +++..
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~--------~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS--------PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC--------TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc--------CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 356899999 777776652 22222 23444444432 2234789999987 66 56667
Q ss_pred CCCeEEEEEcCCCCCccCceeEEEe--ecCCcceEEEEEecCCCCEEEEE-------eCCCeEEEEeCCCCCcceEEe--
Q psy2113 71 WDHTLKIWDAELGGMKKGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSA-------SFDNSVKLWDLRSPKVPLFDM-- 139 (183)
Q Consensus 71 ~d~~v~vwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~l~~~-------~~dg~i~vwd~~~~~~~~~~~-- 139 (183)
.++.|++||..+++. ...+ ..+...+..++++| +..+.+. ..+..|++||..+++. +..+
T Consensus 216 ~~~~I~~~~~~~G~~------~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~-~~~~~~ 286 (329)
T 3fvz_A 216 ENGRIQCFKTDTKEF------VREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI-IDVFKP 286 (329)
T ss_dssp TTTEEEEEETTTCCE------EEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCE-EEEECC
T ss_pred CCCEEEEEECCCCcE------EEEEeccccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeE-EEEEcC
Confidence 889999999986554 3333 34556788899988 2233322 2345899999998875 5554
Q ss_pred -ccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecCC
Q psy2113 140 -LGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 140 -~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 174 (183)
.++...+..++++++ ..+++...++.|++|++...
T Consensus 287 ~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 287 VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 356677899999966 67788888999999998754
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=1e-07 Score=67.55 Aligned_cols=148 Identities=11% Similarity=0.049 Sum_probs=95.0
Q ss_pred eEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEe-CC----CeEEEEEc
Q psy2113 10 TLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS-WD----HTLKIWDA 80 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~-~d----~~v~vwd~ 80 (183)
..+++|++++.++.+.. +..|+. ...+.......+...+.++++++++.++.+. .+ +.|.+||.
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~-------~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINP-------ETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECT-------TTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeC-------CCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 46788999998765532 333322 2222222223466789999999888755544 44 58999998
Q ss_pred CCCCCccCceeEEEee--cCCcceEEEEEecCCCCEEEEEeC------CCeEEEEeCCCCCcceEEeccCCCcEEEEEec
Q psy2113 81 ELGGMKKGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASF------DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152 (183)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 152 (183)
.+.... ..+. .+...+..+.++| +++++++... .+.|..+|..+++. ..+......+..++|+
T Consensus 120 ~~~~~~------~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~i~~~ 190 (333)
T 2dg1_A 120 NGDNLQ------DIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTV--TPIIQNISVANGIALS 190 (333)
T ss_dssp TSCSCE------EEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCE--EEEEEEESSEEEEEEC
T ss_pred CCCEEE------EEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEE--EEeecCCCcccceEEC
Confidence 766531 1121 2345789999999 7777776653 35677777665442 2333334467899999
Q ss_pred CC-cEE-EEecCCCcEEEEEecC
Q psy2113 153 DY-RYI-MSGGQDNSVRVFKTKH 173 (183)
Q Consensus 153 ~~-~~l-~~~~~dg~i~iwd~~~ 173 (183)
++ ..+ ++.+.++.|.+||+++
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECT
T ss_pred CCCCEEEEEeCCCCeEEEEEecC
Confidence 76 544 5556688999999964
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.06 E-value=4.6e-08 Score=76.53 Aligned_cols=162 Identities=11% Similarity=0.083 Sum_probs=97.0
Q ss_pred eeEEEEEeecCcEEEEEEeccCCC--CcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeCCCe-----------
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSL--PSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHT----------- 74 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~----------- 74 (183)
...+.+|||+|..++...-....- .....+...++.+.....+ ..+..++|+|++. |+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 456889999999988654221110 0111133334333322222 2367899999876 777776655
Q ss_pred -----EEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC-----CCeEEEEeCCC------CCcceEE
Q psy2113 75 -----LKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-----DNSVKLWDLRS------PKVPLFD 138 (183)
Q Consensus 75 -----v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-----dg~i~vwd~~~------~~~~~~~ 138 (183)
|++|++.++.... ........+...+..+.|+| ++++|+..+. +..|++||+.+ +......
T Consensus 205 ~~~~~v~~~~l~t~~~~~--~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSED--ILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCEEEEEETTSCGGGC--EEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred CCCCEEEEEECCCCcccc--eEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 9999997654211 11112223455688999999 7777776654 56899999986 4322455
Q ss_pred eccCCCcEEEEEec-CCcEEEEecC-C---CcEEEEEecCCC
Q psy2113 139 MLGHEDKVMCVNWS-DYRYIMSGGQ-D---NSVRVFKTKHQP 175 (183)
Q Consensus 139 ~~~~~~~v~~~~~~-~~~~l~~~~~-d---g~i~iwd~~~~~ 175 (183)
+..+...+... |+ ++..|+..+. + +.|.+||+.++.
T Consensus 282 l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 282 LIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred eeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 55666655553 55 4555544333 3 369999987763
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.06 E-value=2.5e-08 Score=68.61 Aligned_cols=154 Identities=10% Similarity=-0.004 Sum_probs=100.3
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeE-EEEeCCCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l-~s~~~d~~v~vwd~~~~ 83 (183)
...++++.+++.++.+.. +..+.. ...............+.++++.+++.+ ++...++.|.+||....
T Consensus 109 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 109 YPEGLAVDTQGAVYVADRGNNRVVKLAA-------GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp SEEEEEECTTCCEEEEEGGGTEEEEECT-------TCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCcceEECCCCCEEEEECCCCEEEEEEC-------CCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 356888999988665532 222211 111111111223346788999987775 45556789999998764
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQ 162 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~ 162 (183)
.. ......+...+..+++++ ++.++++...++.|.+||...... ......+...+..++++++ ..+++...
T Consensus 182 ~~------~~~~~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 182 NQ------VVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CE------EECCCSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCC-EECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred ce------EeecccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcc-eeeccCCCCCceeEEECCCCCEEEEECC
Confidence 42 111122335688999999 777888777788999999976543 2222233357899999854 77788888
Q ss_pred CCcEEEEEecCCCCC
Q psy2113 163 DNSVRVFKTKHQPKS 177 (183)
Q Consensus 163 dg~i~iwd~~~~~~~ 177 (183)
++.|+++++...+..
T Consensus 254 ~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 254 NDRVVKLTSLEHHHH 268 (270)
T ss_dssp GTEEEEECCCGGGSC
T ss_pred CCEEEEEcCCCcccc
Confidence 999999998766543
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.06 E-value=6.8e-08 Score=67.07 Aligned_cols=147 Identities=16% Similarity=0.180 Sum_probs=98.9
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEe------ccCCCeeEEEEc-cCCeEEEEeC--CCeE
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLK------GHKEAISAVQWT-AVDEIITSSW--DHTL 75 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~-~~~~l~s~~~--d~~v 75 (183)
...++++++++.++.+.. +..|+. ..+.+..+. ++...+..+++. +++.++.+.. ++.|
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~--------~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDK--------EGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECT--------TSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECC--------CCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 457888999998766642 444432 133333342 244578899994 7787665553 8999
Q ss_pred EEEEcCCCCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec--cCCCcEEEEEec
Q psy2113 76 KIWDAELGGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML--GHEDKVMCVNWS 152 (183)
Q Consensus 76 ~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~ 152 (183)
.+||. +++. ...+. .+...+..++++| +++++++...++.|.+||... +. ...+. .+...+..++++
T Consensus 103 ~~~d~-~g~~------~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g-~~-~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 103 QIYNQ-YGQF------VRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNG-NV-LHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp EEECT-TSCE------EEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTS-CE-EEEEECTTTCSSEEEEEEC
T ss_pred EEECC-CCcE------EEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCC-CE-EEEeCCCCccCCcEEEEEC
Confidence 99994 3332 22332 2345689999999 788888887889999999653 32 33332 344578999999
Q ss_pred CC-cEEEEecCCCcEEEEEecC
Q psy2113 153 DY-RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 153 ~~-~~l~~~~~dg~i~iwd~~~ 173 (183)
++ ..+++...++.|++||...
T Consensus 173 ~~g~l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 173 DKQEIFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp SSSEEEEEEGGGTEEEEEETTC
T ss_pred CCCCEEEEECCCCEEEEEcCCC
Confidence 65 6666777789999999743
No 177
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.04 E-value=2.3e-08 Score=72.17 Aligned_cols=65 Identities=8% Similarity=0.147 Sum_probs=49.2
Q ss_pred EEEecCCCCEEEEEeC-----------CCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 105 VRWSPIDPQLFVSASF-----------DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 105 ~~~~p~~~~~l~~~~~-----------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
++++| ++..++.+.. ++.|.+||+.+.+. +..+..+. +..++|+|+ ++|++++. +.|.+||..
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-EEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 56777 4444444322 34899999999876 66666665 899999965 78888876 999999999
Q ss_pred CC
Q psy2113 173 HQ 174 (183)
Q Consensus 173 ~~ 174 (183)
++
T Consensus 334 t~ 335 (361)
T 2oiz_A 334 QP 335 (361)
T ss_dssp SS
T ss_pred CC
Confidence 87
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.01 E-value=3e-08 Score=77.42 Aligned_cols=160 Identities=8% Similarity=-0.094 Sum_probs=96.2
Q ss_pred eeEEEEEeecCcEEEEEEeccCC--CCcccccccCccceEEEeccCCCe--eEEEEccCCe-EEEEeCCCe---------
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTS--LPSFFQLILQKTPLITLKGHKEAI--SAVQWTAVDE-IITSSWDHT--------- 74 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~-l~s~~~d~~--------- 74 (183)
...+.+|||+|..++...-..-. ......+...++.+. ..+...+ ..++|+|+++ |+.++.+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 46788999999998854321110 001111222232220 1122222 6889999886 777777665
Q ss_pred ----EEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC----eEEEEeCCCCCcceEEeccCCCcE
Q psy2113 75 ----LKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN----SVKLWDLRSPKVPLFDMLGHEDKV 146 (183)
Q Consensus 75 ----v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg----~i~vwd~~~~~~~~~~~~~~~~~v 146 (183)
|++|++.++.... .+......+...+..+.|+| ++++++..+.++ .|++||..++. ...+..+...+
T Consensus 200 ~~~~v~~~~l~t~~~~~--~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~--~~~l~~~~~~~ 274 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKD--TVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD--FRLLVKGVGAK 274 (695)
T ss_dssp GGCEEEEEETTSCGGGC--EEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS--CEEEEECSSCC
T ss_pred CCCEEEEEECCCCchhc--eEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc--eEEeecCCCce
Confidence 9999998765311 11222234556789999999 777777666555 67777665544 34455555566
Q ss_pred EEEEecCCcEEEEec---CCCcEEEEEecCCC
Q psy2113 147 MCVNWSDYRYIMSGG---QDNSVRVFKTKHQP 175 (183)
Q Consensus 147 ~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~ 175 (183)
....|.++.+++... .++.|.+||+.++.
T Consensus 275 ~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 275 YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEecCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 666676666334433 25789999987654
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.99 E-value=1e-08 Score=74.15 Aligned_cols=129 Identities=9% Similarity=-0.030 Sum_probs=87.1
Q ss_pred ccCccceEEEeccCCCeeE-----EEEccCCe-EEEEeC-CC--eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEec
Q psy2113 39 ILQKTPLITLKGHKEAISA-----VQWTAVDE-IITSSW-DH--TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSP 109 (183)
Q Consensus 39 ~~~~~~~~~~~~h~~~v~~-----~~~~~~~~-l~s~~~-d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 109 (183)
...+..+..+..|...... .+|+|+++ |+.++. ++ .+.+||+.+++. ......+...+..+.|+|
T Consensus 17 ~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~------~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 17 ASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA------TQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp TTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEE------EECCCSSCBCSSSCEECT
T ss_pred CCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCce------EEeeeCCCCCccceEEcC
Confidence 3455566677777665555 88999887 666665 66 488888877653 223334444455678999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEe--cCC-cEEEE----------------------ecCCC
Q psy2113 110 IDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW--SDY-RYIMS----------------------GGQDN 164 (183)
Q Consensus 110 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~l~~----------------------~~~dg 164 (183)
+++.|+.++.++.+++||+.+++. ......+...+....| +++ ..++. ...+.
T Consensus 91 -dg~~l~~~~~~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (388)
T 3pe7_A 91 -DDDALFYVKDGRNLMRVDLATLEE-NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCC 168 (388)
T ss_dssp -TSSEEEEEETTTEEEEEETTTCCE-EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCE
T ss_pred -CCCEEEEEeCCCeEEEEECCCCcc-eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcc
Confidence 888999999899999999998875 3344445555544444 554 55553 22346
Q ss_pred cEEEEEecCCC
Q psy2113 165 SVRVFKTKHQP 175 (183)
Q Consensus 165 ~i~iwd~~~~~ 175 (183)
.|.+||+.+++
T Consensus 169 ~l~~~d~~~g~ 179 (388)
T 3pe7_A 169 RLMRVDLKTGE 179 (388)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCc
Confidence 79999988764
No 180
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.98 E-value=2.9e-07 Score=64.56 Aligned_cols=157 Identities=10% Similarity=0.105 Sum_probs=101.0
Q ss_pred eEEEEEeecCcEEEEEEe-----------------ccCCCCcccccccCccceEEEeccCCCeeEEEEc----cCCe-E-
Q psy2113 10 TLGVIFMTVGALLTLTNI-----------------EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWT----AVDE-I- 66 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~-l- 66 (183)
..++++.++|.+..+..- .++.+ +. ..+ ...+..+......++|+ +++. +
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~-~g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~ 191 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCF-----TT-DGQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLI 191 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE-----CT-TSC-EEEEEEEESSEEEEEEEECTTSCEEEEE
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEE-----CC-CCC-EEEeccCCCCcceEEEecccCCCCCEEE
Confidence 568889999987765431 11111 11 122 22233344556889999 8874 4
Q ss_pred EEEeCCCeEEEEEcC-CCCCccCceeEEEeecCC-cceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCC
Q psy2113 67 ITSSWDHTLKIWDAE-LGGMKKGAIVKSTFSSHK-EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHED 144 (183)
Q Consensus 67 ~s~~~d~~v~vwd~~-~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~ 144 (183)
++...++.|.+||.. .+.... ......+..+. ..+..+++++ +++++++...++.|.+||.++++. ...+..+..
T Consensus 192 v~~~~~~~i~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~-~~~~~~~~~ 268 (314)
T 1pjx_A 192 VAETPTKKLWSYDIKGPAKIEN-KKVWGHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQP-KMRIRCPFE 268 (314)
T ss_dssp EEETTTTEEEEEEEEETTEEEE-EEEEEECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSC-SEEEECSSS
T ss_pred EEECCCCeEEEEECCCCCcccc-ceEEEECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcE-eEEEeCCCC
Confidence 445578999999976 222110 01122233333 5678899999 788888887889999999986654 445555667
Q ss_pred cEEEEEecCC-c-EEEEecCCCcEEEEEecCCCC
Q psy2113 145 KVMCVNWSDY-R-YIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 145 ~v~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+.+++|+++ . .+++...++.|..|++.....
T Consensus 269 ~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g~ 302 (314)
T 1pjx_A 269 KPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNGK 302 (314)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEECSSCBC
T ss_pred CceeEEECCCCCEEEEEeCCCCeEEEEeCCCCCc
Confidence 8999999865 5 445556678999999876443
No 181
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.96 E-value=1.2e-07 Score=67.18 Aligned_cols=124 Identities=10% Similarity=0.105 Sum_probs=85.8
Q ss_pred ccceEEEeccCCCeeEEEEccCCeEE-EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC
Q psy2113 42 KTPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 120 (183)
Q Consensus 42 ~~~~~~~~~h~~~v~~~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 120 (183)
......+..+...+.+++|++++.++ ++..++.|.+||..+++. ......+...+.+++++| +++++++...
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~------~~~~~~~~~~~~~i~~~~-dg~l~v~~~~ 106 (333)
T 2dg1_A 34 AEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI------KRPFVSHKANPAAIKIHK-DGRLFVCYLG 106 (333)
T ss_dssp CEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCE------EEEEECSSSSEEEEEECT-TSCEEEEECT
T ss_pred cceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcE------EEEeeCCCCCcceEEECC-CCcEEEEeCC
Confidence 34455666777788999999888754 677889999999876653 222224567899999999 7888887766
Q ss_pred C----CeEEEEeCCCCCcceEEec--cCCCcEEEEEecCC-cEEEEecC------CCcEEEEEecC
Q psy2113 121 D----NSVKLWDLRSPKVPLFDML--GHEDKVMCVNWSDY-RYIMSGGQ------DNSVRVFKTKH 173 (183)
Q Consensus 121 d----g~i~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~-~~l~~~~~------dg~i~iwd~~~ 173 (183)
+ +.|.+||..+... ...+. .+...+..++++++ ..+++... .+.|..+|...
T Consensus 107 ~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDNL-QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp TSSSCCEEEEECTTSCSC-EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCCceEEEEeCCCCEE-EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 6 6899999987764 22222 24457899999976 55554443 24555555443
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.95 E-value=3.6e-07 Score=63.80 Aligned_cols=152 Identities=13% Similarity=0.041 Sum_probs=97.1
Q ss_pred eeEEEEEeecCc-EEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEe-CCCeEEEEEcCCCCCc
Q psy2113 9 LTLGVIFMTVGA-LLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMK 86 (183)
Q Consensus 9 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~ 86 (183)
...+.+|+|++. ++.+.. ....+..+ +.... ...+..+...+.++++++++.++.+. .++.|.+||..+++..
T Consensus 29 ~~eg~~~d~~g~~l~~~~~-~~~~i~~~--~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDV-RQNRTWAW--SDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEG-GGTEEEEE--ETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred cccCCeEeCCCCEEEEEeC-CCCEEEEE--ECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 456899999998 444432 11111111 11222 45666677889999999988865554 4689999998766531
Q ss_pred cCceeEEEeec-CCcceEEEEEecCCCCEEEE----Ee-------------CCCeEEEEeCCCCCcceEEeccCCCcEEE
Q psy2113 87 KGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS----AS-------------FDNSVKLWDLRSPKVPLFDMLGHEDKVMC 148 (183)
Q Consensus 87 ~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~----~~-------------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 148 (183)
. ....... ....+..++++| +++++++ |. ..+.|..++.. ++ ......+...+..
T Consensus 104 ~---~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--~~~~~~~~~~~~g 176 (296)
T 3e5z_A 104 S---IADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--LSAPIRDRVKPNG 176 (296)
T ss_dssp E---EECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--EEEEECCCSSEEE
T ss_pred E---EeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC--EEEeecCCCCCcc
Confidence 1 0000111 123467899999 8888887 33 13466666665 33 4445566677899
Q ss_pred EEecCC-cEEEEecCCCcEEEEEec
Q psy2113 149 VNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 149 ~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
++|+++ ..+++.+.++.|.+||+.
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEeCCCCeEEEEEEC
Confidence 999965 666778888999999987
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.93 E-value=1.8e-07 Score=65.35 Aligned_cols=122 Identities=10% Similarity=0.088 Sum_probs=81.5
Q ss_pred eEEEeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCC-CCC-ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC
Q psy2113 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL-GGM-KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 121 (183)
Q Consensus 45 ~~~~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~-~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 121 (183)
+..+..+......++|+|++. +++.+.++.|.+|++.. +.. .. ...+..+...+..+++++ +++++++. +
T Consensus 164 ~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~----~~~~~~~~~~p~~i~~d~-~G~l~v~~--~ 236 (296)
T 3e5z_A 164 LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQ----GVHFTVEPGKTDGLRVDA-GGLIWASA--G 236 (296)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEE----EEEECCSSSCCCSEEEBT-TSCEEEEE--T
T ss_pred EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCC----CeEeeCCCCCCCeEEECC-CCCEEEEc--C
Confidence 344556667789999999876 66666789999999872 221 00 112233455677899999 78777666 7
Q ss_pred CeEEEEeCCCCCcceEEeccCCCcEEEEEec-CC-cEEEEecCCCcEEEEEecCCCCC
Q psy2113 122 NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DY-RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 122 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+.|.+||.. ++. ...+..+.. +.+++|. ++ +.|++++.++ +.-+++++.+.+
T Consensus 237 ~~v~~~~~~-g~~-~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~~ 290 (296)
T 3e5z_A 237 DGVHVLTPD-GDE-LGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGLE 290 (296)
T ss_dssp TEEEEECTT-SCE-EEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBCC
T ss_pred CeEEEECCC-CCE-EEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccccc
Confidence 899999987 443 555666666 8999995 55 6777777653 444455554433
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.92 E-value=1.2e-07 Score=65.07 Aligned_cols=150 Identities=8% Similarity=0.031 Sum_probs=96.1
Q ss_pred eeEEEEEeecCcEEE-EEE----eccCCCCcccccccCccceEEE-eccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCC
Q psy2113 9 LTLGVIFMTVGALLT-LTN----IEVTSLPSFFQLILQKTPLITL-KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~ 82 (183)
...++++++++.++. +.. +..++. .... ...+ ..+...+.++++.+++.++.+..++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~-------~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLAT-------GSTG-TTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-------------EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecC-------CCcc-cceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCC
Confidence 567889999998666 311 333321 1111 1111 2233567899999887766555588999999875
Q ss_pred CCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEe
Q psy2113 83 GGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSG 160 (183)
Q Consensus 83 ~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~ 160 (183)
... ..+. .....+..++++| +++++++...++.|.+|+..+... ..........+..++++++ ..+++.
T Consensus 97 ~~~-------~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~ 167 (270)
T 1rwi_B 97 NNQ-------TVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQ-TVLPFTGLNDPDGVAVDNSGNVYVTD 167 (270)
T ss_dssp SCC-------EECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSC-EECCCCSCCSCCCEEECTTCCEEEEE
T ss_pred ceE-------eeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCcee-EeeccccCCCceeEEEeCCCCEEEEE
Confidence 442 1121 2235689999999 778888877788999998765443 2222233346788999864 666666
Q ss_pred cCCCcEEEEEecCCC
Q psy2113 161 GQDNSVRVFKTKHQP 175 (183)
Q Consensus 161 ~~dg~i~iwd~~~~~ 175 (183)
..++.|.+||.....
T Consensus 168 ~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 168 TDNNRVVKLEAESNN 182 (270)
T ss_dssp GGGTEEEEECTTTCC
T ss_pred CCCCEEEEEecCCCc
Confidence 678899999977643
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.88 E-value=2.3e-08 Score=78.17 Aligned_cols=115 Identities=10% Similarity=0.090 Sum_probs=78.4
Q ss_pred cCCCeeEEEEccCCe-EEEEeC-CC----eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCe-
Q psy2113 51 HKEAISAVQWTAVDE-IITSSW-DH----TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS- 123 (183)
Q Consensus 51 h~~~v~~~~~~~~~~-l~s~~~-d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~- 123 (183)
|...+..++|+|+++ |+.++. .| .|++||+.+++.. ... .....+..++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~------~~~-~~~~~~~~~~wsp-Dg~~l~~~~~~~~~ 194 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL------PDV-LERVKFSCMAWTH-DGKGMFYNAYPQQD 194 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE------EEE-EEEECSCCEEECT-TSSEEEEEECCCCS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC------ccc-ccCcccceEEEEe-CCCEEEEEEECCcc
Confidence 334688999999987 554433 22 8999999887642 111 1122367799999 8888888877665
Q ss_pred ---------------EEEEeCCCCCcc---eEEeccCCCcEEEEEecCC-cEEEEecC-----CCcEEEEEecC
Q psy2113 124 ---------------VKLWDLRSPKVP---LFDMLGHEDKVMCVNWSDY-RYIMSGGQ-----DNSVRVFKTKH 173 (183)
Q Consensus 124 ---------------i~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~-~~l~~~~~-----dg~i~iwd~~~ 173 (183)
|++|++.++... +.....+...+..+.|+|+ ++|+..+. +..|.+||+.+
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 999999876531 2222334556789999966 67766554 56899999986
No 186
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.88 E-value=6.5e-09 Score=75.20 Aligned_cols=155 Identities=9% Similarity=-0.008 Sum_probs=90.5
Q ss_pred EEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCC-eeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccC
Q psy2113 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEA-ISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKG 88 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~ 88 (183)
...+|+|+|..++...-.-........+....+ ...+..+... ...+.|+|++. |+.++.++.+++||+.+++.
T Consensus 39 ~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~--- 114 (396)
T 3c5m_A 39 YQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE--- 114 (396)
T ss_dssp TSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE---
T ss_pred ecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc---
Confidence 456799999987765422111001111222222 2333333333 33478999876 77888888999999987653
Q ss_pred ceeEEEeecCCcceEE-------------------EEEecCCCCEEEEE-----eCCCeEEEEeCCCCCcceEEeccCCC
Q psy2113 89 AIVKSTFSSHKEWVQS-------------------VRWSPIDPQLFVSA-----SFDNSVKLWDLRSPKVPLFDMLGHED 144 (183)
Q Consensus 89 ~~~~~~~~~~~~~v~~-------------------~~~~p~~~~~l~~~-----~~dg~i~vwd~~~~~~~~~~~~~~~~ 144 (183)
......+...... +.++| +++.++.. ..+..|++||+.+++. ..+..+..
T Consensus 115 ---~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~~~~~~~ 188 (396)
T 3c5m_A 115 ---QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGEL--EVIHQDTA 188 (396)
T ss_dssp ---EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCE--EEEEEESS
T ss_pred ---EEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcE--EeeccCCc
Confidence 2222223222222 34566 55544433 3566899999988764 33445667
Q ss_pred cEEEEEecC-C-cEEEEecCC------CcEEEEEecCCC
Q psy2113 145 KVMCVNWSD-Y-RYIMSGGQD------NSVRVFKTKHQP 175 (183)
Q Consensus 145 ~v~~~~~~~-~-~~l~~~~~d------g~i~iwd~~~~~ 175 (183)
.+..+.|+| + ..|+..+.+ ..|.+||+..++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN 227 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc
Confidence 889999998 4 555554433 368888876543
No 187
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.85 E-value=3e-07 Score=65.47 Aligned_cols=146 Identities=10% Similarity=0.021 Sum_probs=86.4
Q ss_pred eEEEEEeecCcEEEEEEecc-C-----------------------CCCcccccccCccceEEEeccCCCeeEEEEccCCe
Q psy2113 10 TLGVIFMTVGALLTLTNIEV-T-----------------------SLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE 65 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 65 (183)
..+++|+|+|..++...... . ....+..+...++.+..+.. . .+..+.|+|++.
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~ 183 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKI 183 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeE
Confidence 56789999999877654210 0 00001112223333234444 3 788999999884
Q ss_pred EEEEeCCC-------eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC--------CeEEEEeCC
Q psy2113 66 IITSSWDH-------TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD--------NSVKLWDLR 130 (183)
Q Consensus 66 l~s~~~d~-------~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d--------g~i~vwd~~ 130 (183)
++++..+. ...||.+.+++ ...+..+ ..+..+ +| +++.++.++.+ ..|.+||
T Consensus 184 ~~~~~~~~~~~~~~~~~~l~~~d~~~-------~~~l~~~-~~~~~~--sp-dg~~l~~~~~~~~~~~~~~~~l~~~d-- 250 (347)
T 2gop_A 184 VVNVPHREIIPQYFKFWDIYIWEDGK-------EEKMFEK-VSFYAV--DS-DGERILLYGKPEKKYMSEHNKLYIYD-- 250 (347)
T ss_dssp EEEEECCCSSCCSSCCEEEEEEETTE-------EEEEEEE-ESEEEE--EE-CSSCEEEEECCSSSCCCSSCEEEEEC--
T ss_pred EEEEecccccccccccccEEEeCCCc-------eEEeccC-cceeeE--CC-CCCEEEEEEccccCCccccceEEEEC--
Confidence 44454432 34555544322 2233333 445554 89 77777666643 4788888
Q ss_pred CCCcceEEeccCCCcEEE-EEecCCcEEEEecCCCcEEEEEecC
Q psy2113 131 SPKVPLFDMLGHEDKVMC-VNWSDYRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~-~~~~~~~~l~~~~~dg~i~iwd~~~ 173 (183)
+++. ......+...+.. +.|+ +.++++++.++.+++| +.+
T Consensus 251 ~~~~-~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 251 GKEV-MGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp SSCE-EESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EES
T ss_pred CCce-EeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-EcC
Confidence 4442 3344556677886 8999 5588889999999999 873
No 188
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.85 E-value=1.2e-07 Score=66.02 Aligned_cols=151 Identities=8% Similarity=0.008 Sum_probs=100.1
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccC-CCeeEEEEccCCe-EEEEeC-CCeEEEEEcCCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHK-EAISAVQWTAVDE-IITSSW-DHTLKIWDAELGGM 85 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~-l~s~~~-d~~v~vwd~~~~~~ 85 (183)
...++++.|+|.+++..+-.+.. .+. +++.+..+..+. ..+.++.+.+++. +++.+. ++.+..+|.. ++.
T Consensus 38 ~~~~~~~~pdG~ilvs~~~~V~~-----~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~ 110 (276)
T 3no2_A 38 ECNSVAATKAGEILFSYSKGAKM-----ITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEV 110 (276)
T ss_dssp CCCEEEECTTSCEEEECBSEEEE-----ECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCE
T ss_pred CCcCeEECCCCCEEEeCCCCEEE-----ECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCE
Confidence 35677899999988843311111 122 567777777653 4688888888877 555555 6777777753 332
Q ss_pred ccCceeEEEee------cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcEEE
Q psy2113 86 KKGAIVKSTFS------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYIM 158 (183)
Q Consensus 86 ~~~~~~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~ 158 (183)
...+. .+......++..+ +++++++...++.|..||.. ++. +..+... ..+..+...+ +..++
T Consensus 111 ------l~~~~~~~~~~~~~~~~~~v~~~~-~G~~lv~~~~~~~v~~~d~~-G~~-~w~~~~~-~~~~~~~~~~~g~~~v 180 (276)
T 3no2_A 111 ------LSKTEFETGIERPHAQFRQINKNK-KGNYLVPLFATSEVREIAPN-GQL-LNSVKLS-GTPFSSAFLDNGDCLV 180 (276)
T ss_dssp ------EEEEEECCSCSSGGGSCSCCEECT-TSCEEEEETTTTEEEEECTT-SCE-EEEEECS-SCCCEEEECTTSCEEE
T ss_pred ------EEEEeccCCCCcccccccCceECC-CCCEEEEecCCCEEEEECCC-CCE-EEEEECC-CCccceeEcCCCCEEE
Confidence 22221 1222345567788 88899999999999999998 765 5555443 3445566664 47888
Q ss_pred EecCCCcEEEEEecCCCC
Q psy2113 159 SGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 159 ~~~~dg~i~iwd~~~~~~ 176 (183)
++..++.|..+|..+++.
T Consensus 181 ~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 181 ACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp ECBTTSEEEEECTTTCCE
T ss_pred EeCCCCeEEEEeCcCCcE
Confidence 888888899999887654
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.84 E-value=1.9e-08 Score=78.56 Aligned_cols=115 Identities=11% Similarity=0.161 Sum_probs=77.1
Q ss_pred cCCCeeEEEEccCCe-EE-----EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCe-
Q psy2113 51 HKEAISAVQWTAVDE-II-----TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS- 123 (183)
Q Consensus 51 h~~~v~~~~~~~~~~-l~-----s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~- 123 (183)
|...+.+++|+|+|+ |+ .|+.+..|++||+.+++... ...+.. .....++|+| +++.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~----~~~~~~--~~~~~~~wsp-Dg~~l~~~~~d~~~ 191 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK----VDVIEG--GKYATPKWTP-DSKGFYYEWLPTDP 191 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS----SCCBSC--CTTCCCEECT-TSSEEEEEECCCCT
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC----CcccCc--ccccceEEec-CCCEEEEEEecCCC
Confidence 444688999999987 44 23345789999999876420 001111 1126789999 8888888887765
Q ss_pred ------------EEEEeCCCCCc---ceEEeccCCCcEEEEEecCC-cEEEEecCCC----cEEEEEec
Q psy2113 124 ------------VKLWDLRSPKV---PLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN----SVRVFKTK 172 (183)
Q Consensus 124 ------------i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg----~i~iwd~~ 172 (183)
|++|++.++.. .+.....+...+..+.|+|+ ++|+..+.++ .|.+||..
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC
Confidence 99999987752 12233345567889999965 6777666555 56666543
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.78 E-value=2e-06 Score=60.17 Aligned_cols=149 Identities=11% Similarity=0.098 Sum_probs=91.1
Q ss_pred eeEEEEEeecCcEEEEEEeccCC-----CC--cccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTS-----LP--SFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWD 79 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vwd 79 (183)
...+++++|+|.+.....-.... .. ..+...... .+..+..+....+.++|+|++. | ++.+.++.|.+|+
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence 35678899999876654211000 00 011011111 2222333445568999998875 4 5667789999999
Q ss_pred cC--CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CC-c
Q psy2113 80 AE--LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DY-R 155 (183)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~-~ 155 (183)
+. ++.... ......+..+...+..+++.+ ++++.++....+.|..||..+++. ...+..+...+++++|. |+ +
T Consensus 178 ~d~~~G~~~~-~~~~~~~~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~-~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 178 YDLQTGQISN-RRSVYKLEKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKR-LQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp ECTTTCCEEE-EEEEEECCGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCE-EEEEECSSSBEEEEEEESGGGC
T ss_pred ccCCCCcccC-cEEEEECCCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceE-EEEEECCCCCceEEEEeCCCCC
Confidence 74 333211 111122233445678899999 788888888888999999998875 56666666789999998 54 4
Q ss_pred EE-EEec
Q psy2113 156 YI-MSGG 161 (183)
Q Consensus 156 ~l-~~~~ 161 (183)
.| ++..
T Consensus 255 ~L~vt~~ 261 (297)
T 3g4e_A 255 EMYVTCA 261 (297)
T ss_dssp EEEEEEB
T ss_pred EEEEEcC
Confidence 44 4443
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.78 E-value=6.5e-07 Score=70.44 Aligned_cols=162 Identities=10% Similarity=-0.015 Sum_probs=92.4
Q ss_pred eeEEEEEeecCcEEEEEEeccCC--CCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCe------------
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTS--LPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHT------------ 74 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~------------ 74 (183)
...+.+|+|+|..++...-.... ......+...++.+.. ..+...+..++|+|+..|+.++.++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTTSEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECCCEEEEEEecCcccccccccCCCC
Confidence 45678999999998875422111 0011112233333221 11222235789998844776665543
Q ss_pred --EEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC-----eEEEEeCCCCCcc-eEEeccCCCcE
Q psy2113 75 --LKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDLRSPKVP-LFDMLGHEDKV 146 (183)
Q Consensus 75 --v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-----~i~vwd~~~~~~~-~~~~~~~~~~v 146 (183)
|++|++.+..... ........+...+..+.|+| ++++|+..+.++ .|++||+.++... ...+..+...+
T Consensus 243 ~~v~~~~lgt~~~~~--~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 243 QTVWLHRLGTPQSAD--QPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CEEEEEETTSCGGGC--EEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CEEEEEECCCCchhC--EEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 8899987654211 11111222334588999999 787777766543 8999999876211 23444444444
Q ss_pred EEEEecCCcEEEEecC----CCcEEEEEecCC
Q psy2113 147 MCVNWSDYRYIMSGGQ----DNSVRVFKTKHQ 174 (183)
Q Consensus 147 ~~~~~~~~~~l~~~~~----dg~i~iwd~~~~ 174 (183)
....+.+++.|+..+. ++.|.+||+.++
T Consensus 320 ~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 320 WDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 4444445566655554 345999998764
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.78 E-value=2.6e-07 Score=65.80 Aligned_cols=143 Identities=13% Similarity=0.178 Sum_probs=80.3
Q ss_pred EEEEEeecCcEEEEEEecc--CCCCcccccccCccceEEEeccCCCeeEEEEccCCe-EEEEeC----------------
Q psy2113 11 LGVIFMTVGALLTLTNIEV--TSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSSW---------------- 71 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~~---------------- 71 (183)
...+|+|+|..++...... ........+...++... +..+.. +..+.|+|++. |+.++.
T Consensus 62 ~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 62 TMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp EEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred CCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 4578999999887654321 00001111222333333 333334 89999999876 665543
Q ss_pred -----------CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC-------eEEEEeCCCCC
Q psy2113 72 -----------DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-------SVKLWDLRSPK 133 (183)
Q Consensus 72 -----------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-------~i~vwd~~~~~ 133 (183)
...|++||+.+++. ...+.. . .+..+.|+| ++ +++++..++ ...+|.+.+++
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~------~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~ 209 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEV------IEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGK 209 (347)
T ss_dssp C---------CEEEEEEEETTTTEE------EEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTE
T ss_pred eecCcccccCccceEEEEECCCCeE------EeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCc
Confidence 25788999876542 123333 3 688999999 77 777775542 33444333433
Q ss_pred cceEEeccCCCcEEEEEecC-CcEEEEecCC--------CcEEEEE
Q psy2113 134 VPLFDMLGHEDKVMCVNWSD-YRYIMSGGQD--------NSVRVFK 170 (183)
Q Consensus 134 ~~~~~~~~~~~~v~~~~~~~-~~~l~~~~~d--------g~i~iwd 170 (183)
...+..+ ..+..+ +| ++.|+.++.+ ..|.+||
T Consensus 210 --~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 210 --EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp --EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred --eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC
Confidence 3333333 455544 64 4666655543 3677777
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.77 E-value=2.8e-06 Score=60.40 Aligned_cols=150 Identities=7% Similarity=-0.103 Sum_probs=96.7
Q ss_pred ceeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEEeccC-----CCeeEEEEccCCeEEEEe--CCCeEE
Q psy2113 8 ILTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITLKGHK-----EAISAVQWTAVDEIITSS--WDHTLK 76 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~l~s~~--~d~~v~ 76 (183)
....++++++++.++.... +.++ +....+....+.... .....+++ .+++++.+. .++.|.
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~i-------D~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~ 155 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFII-------NPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRIL 155 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEE-------ETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEE-------ECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEE
Confidence 3456788888885544441 2222 333444444454332 14557777 566755554 489999
Q ss_pred EEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC----------CeEEEEeCCCCCcceEEecc-CCCc
Q psy2113 77 IWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD----------NSVKLWDLRSPKVPLFDMLG-HEDK 145 (183)
Q Consensus 77 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----------g~i~vwd~~~~~~~~~~~~~-~~~~ 145 (183)
++|..+.+. ...+.. ......+.++| ++++++++..+ +.|.++|..+.+. ...+.. ....
T Consensus 156 viD~~t~~~------~~~i~~-g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-~~~~~~~~g~~ 226 (328)
T 3dsm_A 156 KIDTETDKV------VDELTI-GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTV-EKQFKFKLGDW 226 (328)
T ss_dssp EEETTTTEE------EEEEEC-SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE-EEEEECCTTCC
T ss_pred EEECCCCeE------EEEEEc-CCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeE-EEEEecCCCCC
Confidence 999987664 333332 23456788999 78777777654 7899999988764 333332 1246
Q ss_pred EEEEEecC-CcEEEEecCCCcEEEEEecCCCC
Q psy2113 146 VMCVNWSD-YRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 146 v~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+..++++| ++.++++.. .|.+||+.+++.
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 79999996 477776654 899999987664
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.76 E-value=6e-07 Score=62.42 Aligned_cols=127 Identities=16% Similarity=0.046 Sum_probs=90.2
Q ss_pred cccCccceEEEeccC-CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecC-CcceEEEEEecCCCCEE
Q psy2113 38 LILQKTPLITLKGHK-EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH-KEWVQSVRWSPIDPQLF 115 (183)
Q Consensus 38 ~~~~~~~~~~~~~h~-~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l 115 (183)
+..+++.+.++..+. ..+.++.+.|++.++. +.++.|..||. +++. +..+..+ ...+.++.+.| +++.+
T Consensus 21 d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~------~W~~~~~~~~~~~~~~~~~-dG~~l 91 (276)
T 3no2_A 21 NKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRE------LWNIAAPAGCEMQTARILP-DGNAL 91 (276)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCE------EEEEECCTTCEEEEEEECT-TSCEE
T ss_pred ECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCE------EEEEcCCCCccccccEECC-CCCEE
Confidence 444777788887766 4788999999988666 56788999998 5554 5556544 35788899999 88888
Q ss_pred EEEeC-CCeEEEEeCCCCCcceEEec------cCCCcEEEEEecC-CcEEEEecCCCcEEEEEecCCCC
Q psy2113 116 VSASF-DNSVKLWDLRSPKVPLFDML------GHEDKVMCVNWSD-YRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 116 ~~~~~-dg~i~vwd~~~~~~~~~~~~------~~~~~v~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
++.+. ++.+..+|. +++. +..+. .+......+++.+ ++++++...++.|..||.+ ++.
T Consensus 92 v~~~~~~~~v~~vd~-~Gk~-l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 92 VAWCGHPSTILEVNM-KGEV-LSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEESTTEEEEEECT-TSCE-EEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred EEecCCCCEEEEEeC-CCCE-EEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 88877 778888886 4543 33322 1112334455664 4889999999999999987 553
No 195
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.72 E-value=3.4e-07 Score=66.04 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=83.0
Q ss_pred ccCccceEEEeccCCCeeEEEEccCCe-EEEEe----------CCCeEEEEEcCCCCCccCceeEEEeec------CCcc
Q psy2113 39 ILQKTPLITLKGHKEAISAVQWTAVDE-IITSS----------WDHTLKIWDAELGGMKKGAIVKSTFSS------HKEW 101 (183)
Q Consensus 39 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~----------~d~~v~vwd~~~~~~~~~~~~~~~~~~------~~~~ 101 (183)
..+.+.+..+..+..+ .++|+|+++ +++++ .++.|.+||..+.+. ...+.. +...
T Consensus 38 ~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~------~~~i~~~~~~~~~g~~ 109 (361)
T 2oiz_A 38 YTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF------EKEISLPPKRVQGLNY 109 (361)
T ss_dssp TTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE------EEEEEECTTBCCBCCC
T ss_pred CCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE------EEEEEcCccccccCCC
Confidence 3455566677666555 899999987 55544 357899999887654 333322 2234
Q ss_pred eEEEEEecCCCCEEEEEeC--CCeEEEEeCCCCCcceEE-eccCCCcEEEEEecCC--cEEEEecCCCcEEEEEecC
Q psy2113 102 VQSVRWSPIDPQLFVSASF--DNSVKLWDLRSPKVPLFD-MLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 102 v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~ 173 (183)
...++++| ++++++++.. ++.|.+||+.+.+. +.. +. ... ...+.+.|. ..+++.+.||.+.+|+...
T Consensus 110 p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~-~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 110 DGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDY-VEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp GGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEE-EEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred cceEEECC-CCCEEEEECCCCCCeEEEEECCCCcE-EEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 67799999 7888877764 57999999998864 444 33 222 222444543 6778888999999998865
No 196
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.71 E-value=1.2e-06 Score=63.31 Aligned_cols=156 Identities=9% Similarity=0.023 Sum_probs=84.7
Q ss_pred eEEEEEee-cCcEEEEEEeccCC---CCcccccccCccceEEEeccC--CCeeEEEEccCCe-EEEEeCC-----CeEEE
Q psy2113 10 TLGVIFMT-VGALLTLTNIEVTS---LPSFFQLILQKTPLITLKGHK--EAISAVQWTAVDE-IITSSWD-----HTLKI 77 (183)
Q Consensus 10 ~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~-l~s~~~d-----~~v~v 77 (183)
...+.|+| ++..++......+. ......+.. ......+..+. ..+..+.|+|++. |+.++.+ +.|++
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~-~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNED-GSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETT-SCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECC-CCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 45678999 77765554321111 011111111 22223333332 2578899999876 6655443 44999
Q ss_pred EEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe----------------CCCeEEEEeCCCCCcceEEecc
Q psy2113 78 WDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS----------------FDNSVKLWDLRSPKVPLFDMLG 141 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~----------------~dg~i~vwd~~~~~~~~~~~~~ 141 (183)
||+.+++. ..+..... .. +.|+|.++++++.++ .+..|++||+.+++. ..+..
T Consensus 269 ~d~~~g~~-------~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~ 337 (396)
T 3c5m_A 269 ANPETLEN-------EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--QKLCK 337 (396)
T ss_dssp ECTTTCCE-------EEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC--CEEEE
T ss_pred EECCCCCe-------EEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce--EEccC
Confidence 99987653 12221222 23 788883445666544 347899999987763 23333
Q ss_pred CCC-----------cEEEEEecCC-cEEEEec-CCCcEEEEE--ecCCCCC
Q psy2113 142 HED-----------KVMCVNWSDY-RYIMSGG-QDNSVRVFK--TKHQPKS 177 (183)
Q Consensus 142 ~~~-----------~v~~~~~~~~-~~l~~~~-~dg~i~iwd--~~~~~~~ 177 (183)
+.. .+..+.|+|+ ..|+..+ .++...+|. +..+...
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 338 HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 433 2566789965 5565444 456555554 4454443
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.70 E-value=7.5e-06 Score=56.73 Aligned_cols=146 Identities=9% Similarity=0.105 Sum_probs=95.0
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEE--eccCCCeeEEEEccCCeEEEE-eCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITL--KGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~l~s~-~~d~~v~vwd~~ 81 (183)
...++++.++|.+..+.. +..++. . .....+ ..+...+.++++.+++.+..+ ..++.|..||..
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~-------~--~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINL-------D--GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-------T--CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcC-------C--CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 456888999998776542 222321 1 112222 234567899999988775544 457889999875
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEe
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSG 160 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~ 160 (183)
+... ...+......+..+++.| ++.++++...++.|..||. +++............+..+++.++ ..+++.
T Consensus 87 -g~~~-----~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 87 -GIIK-----EYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp -SCEE-----EEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred -CcEE-----EEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEe
Confidence 2210 111222455789999999 7888887777889999998 554322223334567899999965 566666
Q ss_pred cCCCcEEEEEe
Q psy2113 161 GQDNSVRVFKT 171 (183)
Q Consensus 161 ~~dg~i~iwd~ 171 (183)
..++.|..||.
T Consensus 159 ~~~~~i~~~~~ 169 (299)
T 2z2n_A 159 NQNNAIGRITE 169 (299)
T ss_dssp TTTTEEEEECT
T ss_pred CCCCEEEEEcC
Confidence 66788999987
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.70 E-value=6.1e-06 Score=63.05 Aligned_cols=159 Identities=16% Similarity=0.136 Sum_probs=102.6
Q ss_pred eceeEEEEEeecCcEEEEEEeccCCCCcccccc--cCccceEEEeccCCCeeEEEEc----cCCe-E-EEEeCCCeEEEE
Q psy2113 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLI--LQKTPLITLKGHKEAISAVQWT----AVDE-I-ITSSWDHTLKIW 78 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~~----~~~~-l-~s~~~d~~v~vw 78 (183)
|....+++|+|+|+++.+.+.. -.+.. . +. .+.+.+.++.... ....++|+ |+++ + ++...++.+.++
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~d-g~V~v-i-D~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~Vi 271 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRD-GKVNM-I-DLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIM 271 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETT-SEEEE-E-ETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEE
T ss_pred CCCccceEECCCCCEEEEEcCC-CeEEE-E-ECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEE
Confidence 3345688999999988876521 00111 1 22 2445566666533 35789999 5875 4 455567999999
Q ss_pred EcCCCCCccCceeEEEeec----------C-CcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEE
Q psy2113 79 DAELGGMKKGAIVKSTFSS----------H-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM 147 (183)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~----------~-~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 147 (183)
|..+.+. ...+.. | ...+..+..+++...++++...+|.|.++|..+.+..............
T Consensus 272 D~~t~~~------~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~ 345 (567)
T 1qks_A 272 DGETLEP------KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH 345 (567)
T ss_dssp ETTTCCE------EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred ECCCCcE------EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccccc
Confidence 9877664 222211 1 2257788888855666777777899999999876532222223345677
Q ss_pred EEEecCC-cEEE-EecCCCcEEEEEecCCC
Q psy2113 148 CVNWSDY-RYIM-SGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 148 ~~~~~~~-~~l~-~~~~dg~i~iwd~~~~~ 175 (183)
.+.|+++ .+++ +...+++|.++|+.+++
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 8899965 6554 45568899999998764
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.67 E-value=9.9e-06 Score=56.11 Aligned_cols=146 Identities=10% Similarity=0.055 Sum_probs=93.9
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccceEEE--eccCCCeeEEEEccCCeEE-EEeCCCeEEEEEcC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPLITL--KGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAE 81 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~l~-s~~~d~~v~vwd~~ 81 (183)
...++++.+++.+..+.. +..++. . . ....+ ......+.++.+.+++.+. +...++.|.+||.
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~-------~-g-~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~- 127 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITK-------K-G-IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD- 127 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-------T-S-CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECC-------C-C-cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-
Confidence 356788888888766542 222221 1 1 12222 2245578899999887755 4456789999997
Q ss_pred CCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEe
Q psy2113 82 LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSG 160 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~ 160 (183)
++... ..........+..+++.+ +++++++...++.|..||. +++............+..+++.++ ..+++.
T Consensus 128 ~g~~~-----~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 128 DGKIR-----EYELPNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVE 200 (299)
T ss_dssp TCCEE-----EEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCEE-----EecCCCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEc
Confidence 43321 111223445689999999 7778887777789999999 655312223334556889999865 666666
Q ss_pred cCCCcEEEEEe
Q psy2113 161 GQDNSVRVFKT 171 (183)
Q Consensus 161 ~~dg~i~iwd~ 171 (183)
..++.|..||.
T Consensus 201 ~~~~~i~~~~~ 211 (299)
T 2z2n_A 201 IIGNKIGRITT 211 (299)
T ss_dssp TTTTEEEEECT
T ss_pred cCCceEEEECC
Confidence 66788999998
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.62 E-value=3.8e-07 Score=71.77 Aligned_cols=113 Identities=17% Similarity=0.190 Sum_probs=73.9
Q ss_pred CCeeEEEEccCCe-EEEEeCC-----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC----
Q psy2113 53 EAISAVQWTAVDE-IITSSWD-----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN---- 122 (183)
Q Consensus 53 ~~v~~~~~~~~~~-l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg---- 122 (183)
..+..+.|+|+|+ |+.++.+ ..|++||+.+++.. ....+...+..++|+| + +.|+.++.++
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~-------~~~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~ 233 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL-------ADELKWVKFSGLAWLG-N-DALLYSRFAEPKEG 233 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE-------EEEEEEEESCCCEEST-T-SEEEEEECCCC---
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC-------CccCCCceeccEEEEC-C-CEEEEEEecCcccc
Confidence 3678899999987 5444332 46999999887641 1111222235789999 6 7777666554
Q ss_pred ----------eEEEEeCCCCCc---ceEEeccCCCcEEEEEecCC-cEEEEecCCC-----cEEEEEecCC
Q psy2113 123 ----------SVKLWDLRSPKV---PLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN-----SVRVFKTKHQ 174 (183)
Q Consensus 123 ----------~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg-----~i~iwd~~~~ 174 (183)
.|++|++.++.. .+.....+...+..+.|+|+ ++|+..+.++ .|.+||+.++
T Consensus 234 ~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 234 QAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp -----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred cccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 389999977652 12222233345889999966 6776665443 7999999875
No 201
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.60 E-value=6.2e-06 Score=60.52 Aligned_cols=117 Identities=9% Similarity=0.054 Sum_probs=78.6
Q ss_pred cCCCeeEEEEcc-CCeEEEEeCCCeEEEEEcCCCCCccCceeEEE--eecCCcce--EEEEEecCCCCEEEEEeCCCeEE
Q psy2113 51 HKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKST--FSSHKEWV--QSVRWSPIDPQLFVSASFDNSVK 125 (183)
Q Consensus 51 h~~~v~~~~~~~-~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~--~~~~~~~v--~~~~~~p~~~~~l~~~~~dg~i~ 125 (183)
....+.+++++| ++.|+.+..++.|+.||..+.... .... ..++...- ..++|+|+++.++++-..++.|+
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~----~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT----LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE----EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE----EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 345678899998 677777778899999998765421 0100 11122222 38999995577777777788999
Q ss_pred EEeCCCCCcceEEeccCC---------------CcEEEEEecCC-cEEEEec-CCCcEEEEEecCC
Q psy2113 126 LWDLRSPKVPLFDMLGHE---------------DKVMCVNWSDY-RYIMSGG-QDNSVRVFKTKHQ 174 (183)
Q Consensus 126 vwd~~~~~~~~~~~~~~~---------------~~v~~~~~~~~-~~l~~~~-~dg~i~iwd~~~~ 174 (183)
.|+.... ...+.++. .....++++++ .++++-. .++.|+.||+.++
T Consensus 293 ~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 293 KITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT
T ss_pred EEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC
Confidence 9987643 23333322 34789999965 6667777 7889999996544
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.58 E-value=2.1e-05 Score=54.97 Aligned_cols=143 Identities=9% Similarity=0.115 Sum_probs=91.0
Q ss_pred eEEEEEeecCcEEEE-------EE----eccCCCCcccccccCccceEEEe-----ccCCCeeEEEEccC-CeEEEEeCC
Q psy2113 10 TLGVIFMTVGALLTL-------TN----IEVTSLPSFFQLILQKTPLITLK-----GHKEAISAVQWTAV-DEIITSSWD 72 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~-~~l~s~~~d 72 (183)
..+++|++++.++.+ .. +..|+.. ..+. ..+. ++...+.++.+.++ +.+..++..
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~-------~g~~-~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK-------TGKK-TVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTT-------TCCE-EEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC-------CCcE-EEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 357889999987766 21 3333321 1111 2222 25567899999988 887766666
Q ss_pred CeEEEEEcCCCCCccCceeEEEe-e-----cCCcceEEEEEecCCCCEEEEEeCC---------------CeEEEEeCCC
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTF-S-----SHKEWVQSVRWSPIDPQLFVSASFD---------------NSVKLWDLRS 131 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~-~-----~~~~~v~~~~~~p~~~~~l~~~~~d---------------g~i~vwd~~~ 131 (183)
..|.+||.. ++. ..+ . .....+.+++++| +++++++...+ +.|..||..
T Consensus 92 ~~l~~~d~~-g~~-------~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~- 161 (314)
T 1pjx_A 92 LGLLVVQTD-GTF-------EEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD- 161 (314)
T ss_dssp TEEEEEETT-SCE-------EECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-
T ss_pred CCEEEEeCC-CCE-------EEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-
Confidence 689999987 442 111 1 1124578999999 78887777655 567777765
Q ss_pred CCcceEEeccCCCcEEEEEec----CCc-EE-EEecCCCcEEEEEec
Q psy2113 132 PKVPLFDMLGHEDKVMCVNWS----DYR-YI-MSGGQDNSVRVFKTK 172 (183)
Q Consensus 132 ~~~~~~~~~~~~~~v~~~~~~----~~~-~l-~~~~~dg~i~iwd~~ 172 (183)
++ ......+......++|+ ++. .+ ++...++.|.+||+.
T Consensus 162 g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 162 GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 43 23333334456888998 773 44 455668899999986
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=5.8e-06 Score=58.75 Aligned_cols=127 Identities=9% Similarity=0.060 Sum_probs=83.7
Q ss_pred cccCccceEEEeccCCCeeEEEEccCCeEEEEe-CCCeEEEEEcCCCCCccCceeEEEeecCC-----cceEEEEEecCC
Q psy2113 38 LILQKTPLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKKGAIVKSTFSSHK-----EWVQSVRWSPID 111 (183)
Q Consensus 38 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~p~~ 111 (183)
+..+.+.+.++. .......+++++++++..+. .++.|.+||..+.+. ...+.... .....+++ . +
T Consensus 70 D~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~------~~~i~~g~~~~~~~~p~~i~~-~-~ 140 (328)
T 3dsm_A 70 DINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI------TGYIECPDMDMESGSTEQMVQ-Y-G 140 (328)
T ss_dssp ETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEE------EEEEECTTCCTTTCBCCCEEE-E-T
T ss_pred ECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeE------EEEEEcCCccccCCCcceEEE-E-C
Confidence 334556666664 34667899998888866555 889999999987654 22333222 14556666 3 5
Q ss_pred CCEEEEEe-CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCC----------CcEEEEEecCCC
Q psy2113 112 PQLFVSAS-FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQD----------NSVRVFKTKHQP 175 (183)
Q Consensus 112 ~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~d----------g~i~iwd~~~~~ 175 (183)
+.++++.. .++.|.++|+.+++. ...+.. ......+.++++ .++++...+ +.|.++|.++.+
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~-~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~ 214 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKV-VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT 214 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEE-EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE
T ss_pred CEEEEEcCCCCCEEEEEECCCCeE-EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe
Confidence 66666654 488999999998764 444433 334567888875 555555444 789999987654
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.55 E-value=6.3e-06 Score=57.66 Aligned_cols=155 Identities=8% Similarity=0.109 Sum_probs=89.4
Q ss_pred ceeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEecc-----CCCeeEEEEccCCeEEEEeC----------C
Q psy2113 8 ILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGH-----KEAISAVQWTAVDEIITSSW----------D 72 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~l~s~~~----------d 72 (183)
-...++++++++.+++...-.++. + +....+ +..+... ...++.+++.|++.+..++. .
T Consensus 54 ~~~~~i~~~~dG~l~v~~~~~l~~---~--d~~~g~-~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~ 127 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATIGTKFCA---L--NWKEQS-AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLER 127 (297)
T ss_dssp SCEEEEEEBTTSSEEEEETTEEEE---E--ETTTTE-EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCT
T ss_pred CceEEEEECCCCCEEEEECCeEEE---E--ECCCCc-EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccC
Confidence 345688999999966654311111 1 111121 1222111 23478899999888655542 1
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCC-EEEEEeCCCeEEEEeCC--CCCcc----eEEeccCCCc
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDNSVKLWDLR--SPKVP----LFDMLGHEDK 145 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg~i~vwd~~--~~~~~----~~~~~~~~~~ 145 (183)
..-.+|.+..... ...+.........++|+| +++ ++++.+.++.|.+||+. ++... ...+..+...
T Consensus 128 ~~~~l~~~d~~g~------~~~~~~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~ 200 (297)
T 3g4e_A 128 HQGALYSLFPDHH------VKKYFDQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQI 200 (297)
T ss_dssp TCEEEEEECTTSC------EEEEEEEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCE
T ss_pred CCcEEEEEECCCC------EEEEeeccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCC
Confidence 3345555543321 112223334568899999 665 45666668899999873 44320 1122233456
Q ss_pred EEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 146 VMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 146 v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+..+++.++ .+.++...++.|..||..+++
T Consensus 201 p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 201 PDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred CCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 788999855 666666667889999987654
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.55 E-value=5.7e-05 Score=53.59 Aligned_cols=143 Identities=10% Similarity=0.020 Sum_probs=87.6
Q ss_pred eeEEEEEeecCcEEEEEEe--------ccCCCCcccccccCccceEEEeccCCCeeEEEEccCCe-E-EEEeCCCeEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTNI--------EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l-~s~~~d~~v~vw 78 (183)
...+++++|+|.+.....- .+|.+ + ..+ +..+..+....+.++|+|++. + ++.+.++.|.+|
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~-----~--~g~-~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~ 206 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHV-----A--KGK-VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRV 206 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEE-----E--TTE-EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEE
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEE-----e--CCc-EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEE
Confidence 4567889999987655421 12211 1 122 222333444567899998875 4 455667899999
Q ss_pred EcC--CC-CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CC
Q psy2113 79 DAE--LG-GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DY 154 (183)
Q Consensus 79 d~~--~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~ 154 (183)
|+. ++ .... ......+......+..+++.+ +++++++...++.|..||. +++. ...+..+...+.+++|. ++
T Consensus 207 d~~~~~Gl~~~~-~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~-~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 207 PLDARTGLPTGK-AEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNH-IARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp EBCTTTCCBSSC-CEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCE-EEEEECSCSBEEEEEEESTT
T ss_pred EcccccCCcccC-ceEEEECCCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCE-EEEEECCCCCcEEEEEecCC
Confidence 986 33 2211 111222223345677899998 7788877767789999998 4443 45555566679999998 65
Q ss_pred -cEE-EEecCC
Q psy2113 155 -RYI-MSGGQD 163 (183)
Q Consensus 155 -~~l-~~~~~d 163 (183)
..| ++...+
T Consensus 283 ~~~L~vt~~~~ 293 (326)
T 2ghs_A 283 ASRLLVTSARE 293 (326)
T ss_dssp SCEEEEEEBCT
T ss_pred CCEEEEEecCC
Confidence 555 444333
No 206
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.52 E-value=6.3e-06 Score=62.99 Aligned_cols=105 Identities=13% Similarity=0.117 Sum_probs=76.7
Q ss_pred cCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCC--CCCcceEE
Q psy2113 62 AVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR--SPKVPLFD 138 (183)
Q Consensus 62 ~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~--~~~~~~~~ 138 (183)
+.+. +++...++.|.++|..+.+. ...+. ....+..+.++| +++++++++.|+.|.+||+. +.+. +..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v------~~~i~-~g~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~-v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEI------KTVLD-TGYAVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTT-VAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCE------EEEEE-CSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCE-EEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeE------EEEEe-CCCCccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcE-eEE
Confidence 4445 56777889999999988764 43444 334577999999 88898889999999999996 5554 444
Q ss_pred eccCCCcEEEEEec----CC-cEEEEecC-CCcEEEEEecCCCC
Q psy2113 139 MLGHEDKVMCVNWS----DY-RYIMSGGQ-DNSVRVFKTKHQPK 176 (183)
Q Consensus 139 ~~~~~~~v~~~~~~----~~-~~l~~~~~-dg~i~iwd~~~~~~ 176 (183)
+.. ......++|+ |+ +++++++. ++.|.++|..+.+.
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 443 3356899999 34 66666554 68999999776543
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.50 E-value=3.9e-05 Score=54.41 Aligned_cols=147 Identities=14% Similarity=0.025 Sum_probs=88.0
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccC
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKG 88 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 88 (183)
+..+.+|+|++..+...+.....+..+ +.... ....+. ....+.++.|.+++.++.++.+ .|.+||..+++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~--d~~~~-~~~~~~-~~~~v~~i~~~~dg~l~v~~~~-gl~~~d~~~g~~--- 121 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHEL--HLASG-RKTVHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVL--- 121 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEE--ETTTT-EEEEEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCE---
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEE--ECCCC-cEEEEE-CCCcceEEEEeCCCeEEEEECC-CEEEEECCCCcE---
Confidence 456788999866555544322111111 11112 222232 3467899999999987666644 489999876653
Q ss_pred ceeEEEeec-----CCcceEEEEEecCCCCEEEEEeC------CCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cE
Q psy2113 89 AIVKSTFSS-----HKEWVQSVRWSPIDPQLFVSASF------DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RY 156 (183)
Q Consensus 89 ~~~~~~~~~-----~~~~v~~~~~~p~~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 156 (183)
..+.. ....+..+.++| +++++++... .+.|..++ +++ ...+.........++|+++ +.
T Consensus 122 ----~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~--~~~~~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 122 ----TLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGK--VTKLFADISIPNSICFSPDGTT 192 (326)
T ss_dssp ----EEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTE--EEEEEEEESSEEEEEECTTSCE
T ss_pred ----EEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCc--EEEeeCCCcccCCeEEcCCCCE
Confidence 11211 124588999999 7777765542 24566666 333 2333333345688999965 44
Q ss_pred E-EEecCCCcEEEEEec
Q psy2113 157 I-MSGGQDNSVRVFKTK 172 (183)
Q Consensus 157 l-~~~~~dg~i~iwd~~ 172 (183)
+ ++.+.++.|.+||+.
T Consensus 193 lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEETTTCEEEEEEBC
T ss_pred EEEEECCCCEEEEEEcc
Confidence 4 555667899999986
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.50 E-value=2.5e-05 Score=54.78 Aligned_cols=154 Identities=9% Similarity=0.066 Sum_probs=94.3
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeC-CCeEEEEEcCCCCCcc
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKK 87 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~ 87 (183)
...+.+|+|++..+...+.....+..+ +. .. ....+..+...+..+.+.+++.++.+.. ++.|.+|+.. +....
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~--~~-~g-~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~ 120 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGW--RE-DG-TVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHL 120 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEE--ET-TS-CEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEE--eC-CC-CEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEE
Confidence 346889999998555554322221111 11 22 2345555667789999999988776654 5789999875 33210
Q ss_pred CceeEEEeec-CCcceEEEEEecCCCCEEEE----EeC-------------CCeEEEEeCCCCCcceEEeccCCCcEEEE
Q psy2113 88 GAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS----ASF-------------DNSVKLWDLRSPKVPLFDMLGHEDKVMCV 149 (183)
Q Consensus 88 ~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~----~~~-------------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 149 (183)
......+ ....+..+++.| +++++++ |.. .+.|..+|..+++. ..+. .....+.+
T Consensus 121 ---~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--~~~~-~~~~p~gl 193 (305)
T 3dr2_A 121 ---LVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--QRMA-DLDHPNGL 193 (305)
T ss_dssp ---EECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--EEEE-EESSEEEE
T ss_pred ---EEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--EEEe-cCCCCcce
Confidence 0001111 113467899999 8888886 332 25688888876664 2222 44567889
Q ss_pred EecCC-cEEEEecCC------CcEEEEEecCC
Q psy2113 150 NWSDY-RYIMSGGQD------NSVRVFKTKHQ 174 (183)
Q Consensus 150 ~~~~~-~~l~~~~~d------g~i~iwd~~~~ 174 (183)
+|+++ ..|+.+... +.|.+|++...
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 99976 556665554 68999998753
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.48 E-value=7.8e-05 Score=51.57 Aligned_cols=147 Identities=7% Similarity=0.063 Sum_probs=94.1
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccce-EEEeccCCCeeEEEEccCCeEEEE-eCCCeEEEEEcCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTPL-ITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAEL 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~l~s~-~~d~~v~vwd~~~ 82 (183)
...++++.+++.+..+.. +..++. . .+.. ..+..+...+.++.+.+++.+..+ ..++.|..+|..
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~-------~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQ-------S-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECT-------T-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECC-------C-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 456788899988766542 222221 1 1111 122233467889999988775544 457889999876
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
++.. ..........+..+++.+ +++++++...++.|..+|.. ++............+..+++.++ ...++..
T Consensus 92 g~~~-----~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 92 GGFT-----EYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp SCEE-----EEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCeE-----EecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 3321 112222346689999998 78888877778899999987 54312223334567889999865 6556666
Q ss_pred CCCcEEEEEe
Q psy2113 162 QDNSVRVFKT 171 (183)
Q Consensus 162 ~dg~i~iwd~ 171 (183)
.++.|..+|.
T Consensus 165 ~~~~i~~~~~ 174 (300)
T 2qc5_A 165 QNNSIGRITN 174 (300)
T ss_dssp TTTEEEEECT
T ss_pred CCCeEEEECC
Confidence 6788998887
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.45 E-value=3e-05 Score=60.66 Aligned_cols=161 Identities=17% Similarity=0.161 Sum_probs=90.8
Q ss_pred eeEEEEEeecCcEEEEEEeccCC--CCcccccccCccceEE-EeccCCCeeEEEEccCCe-EEEEeCCC-----------
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTS--LPSFFQLILQKTPLIT-LKGHKEAISAVQWTAVDE-IITSSWDH----------- 73 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~-l~s~~~d~----------- 73 (183)
...++.|||+|..++...-..-+ ......+...++.+.. +.. .....++|+ ++. |+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 45678999999988864311111 0011112333333221 111 113577899 765 77776663
Q ss_pred --eEEEEEcCCCCCccCceeEEEeec-CCcceEEEEEecCCCCEEE-EEeC---CCeEEEEeCCCCCcceEEeccCCCcE
Q psy2113 74 --TLKIWDAELGGMKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFV-SASF---DNSVKLWDLRSPKVPLFDMLGHEDKV 146 (183)
Q Consensus 74 --~v~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~-~~~~---dg~i~vwd~~~~~~~~~~~~~~~~~v 146 (183)
.|++|++.+..... ..+..... |...+..+.++| ++++++ +... +..|+++|+.++......+..+....
T Consensus 207 ~~~v~~~~lgt~~~~~--~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~ 283 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDD--RLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDAD 283 (693)
T ss_dssp CCEEEEEETTSCGGGC--EEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSC
T ss_pred CcEEEEEECCCCcccc--eEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCce
Confidence 49999987654321 11212222 444578899999 676654 3332 35899999987643245555666555
Q ss_pred EEEEecCC-cEEEEecCC---CcEEEEEecCCC
Q psy2113 147 MCVNWSDY-RYIMSGGQD---NSVRVFKTKHQP 175 (183)
Q Consensus 147 ~~~~~~~~-~~l~~~~~d---g~i~iwd~~~~~ 175 (183)
......++ .+++....+ +.|..+|+.++.
T Consensus 284 ~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~ 316 (693)
T 3iuj_A 284 VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPG 316 (693)
T ss_dssp EEEEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 55433344 455555444 578999988754
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.44 E-value=2e-05 Score=56.35 Aligned_cols=149 Identities=13% Similarity=0.105 Sum_probs=92.0
Q ss_pred eceeEEEEEeecCcEEEEEE-e-----ccCCCCcccccccCccceEEE-------eccCCCeeEEEEccCCeEEEEeC--
Q psy2113 7 GILTLGVIFMTVGALLTLTN-I-----EVTSLPSFFQLILQKTPLITL-------KGHKEAISAVQWTAVDEIITSSW-- 71 (183)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~~~~~~~~~l~s~~~-- 71 (183)
.....+++++++|+++.... . .++.+. .++ +..+ ..|...+.++++.++++|.....
T Consensus 16 ~~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-------~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~ 87 (343)
T 2qe8_A 16 SLAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-------QDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN 87 (343)
T ss_dssp SSCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-------TTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH
T ss_pred CCCcceEEECCCCCEEEEeCCCCCCceEEEEEC-------CCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC
Confidence 34567899999998877642 1 222211 111 1111 23556889999999888655442
Q ss_pred ----CCeEEEEEcCCCCCccCceeEEEee------cCCcceEEEEEecCCCCEEEEEe---CCCeEEEEeCCCCCcceEE
Q psy2113 72 ----DHTLKIWDAELGGMKKGAIVKSTFS------SHKEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDLRSPKVPLFD 138 (183)
Q Consensus 72 ----d~~v~vwd~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~p~~~~~l~~~~---~dg~i~vwd~~~~~~~~~~ 138 (183)
+..|.+||+.+++. ...+. .+...+..++++|.++..+++-. .++.|.+||+.+++. ...
T Consensus 88 ~~~~~~~i~~~d~~tg~~------~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~-~r~ 160 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNNQL------SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA-ARV 160 (343)
T ss_dssp HHTSCCEEEEEETTTTEE------EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE-EEE
T ss_pred CcCCCCeEEEEECCCCeE------EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE-EEE
Confidence 57999999987653 22222 12345688999984455556655 678999999987653 222
Q ss_pred eccC-----------------------------CCcEEEEEecCC-cEEEEecCCC-cEEEEE
Q psy2113 139 MLGH-----------------------------EDKVMCVNWSDY-RYIMSGGQDN-SVRVFK 170 (183)
Q Consensus 139 ~~~~-----------------------------~~~v~~~~~~~~-~~l~~~~~dg-~i~iwd 170 (183)
+.+| ...+..++|+++ ..|+.+..++ .|..++
T Consensus 161 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 161 LQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp CTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred ecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 2221 123688999966 5777766655 455444
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.42 E-value=1.9e-05 Score=57.94 Aligned_cols=113 Identities=10% Similarity=0.076 Sum_probs=78.2
Q ss_pred CCeeEEEEccCCeEE-EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC--eEEEEeC
Q psy2113 53 EAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN--SVKLWDL 129 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~vwd~ 129 (183)
.....|+|++++.|+ +...++.|++||..++.. ...... ..... ++|+| +++.++.+..++ .|.+++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~------~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKV------TTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEE------EEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEE------EEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEc
Confidence 356789999888854 555678999999976553 222222 22334 99999 777777777655 8999998
Q ss_pred CCCCcceEEe----ccCCCcEEEEEecC-CcEEEEecCCCcEEEEEecCCC
Q psy2113 130 RSPKVPLFDM----LGHEDKVMCVNWSD-YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 130 ~~~~~~~~~~----~~~~~~v~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
..... ...+ ......+.+++++| +..|+.+..++.|+.||+.+..
T Consensus 202 ~~~~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 202 ASGWA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp GGTTC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred CCCce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 76553 2222 22446678899997 5667667778899999987553
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.42 E-value=0.00014 Score=50.34 Aligned_cols=147 Identities=12% Similarity=0.073 Sum_probs=91.4
Q ss_pred eeEEEEEeecCcEEEEEE----eccCCCCcccccccCccc-eEEEeccCCCeeEEEEccCCeEE-EEeCCCeEEEEEcCC
Q psy2113 9 LTLGVIFMTVGALLTLTN----IEVTSLPSFFQLILQKTP-LITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAEL 82 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~l~-s~~~d~~v~vwd~~~ 82 (183)
...++++.+++.+..+.. +..++ .. .+. ...+......+.++++.+++.+. +...++.|..+|..
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d-------~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 133 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLS-------KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD- 133 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEEC-------TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-
T ss_pred cceeEEECCCCCEEEEecCCCeEEEEC-------CC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-
Confidence 356778888887666542 22221 11 111 11222234678899999887755 44457899999876
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEec
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGG 161 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~ 161 (183)
++.. ...+......+..+++.+ +++++++...++.|..+|. +++............+..+++.++ ...++..
T Consensus 134 g~~~-----~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 134 GTIY-----EYDLPNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp SCEE-----EEECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CCEE-----EccCCCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEcc
Confidence 3321 111222345689999999 7777777766789999998 544312222234456889999865 5556555
Q ss_pred CCCcEEEEEe
Q psy2113 162 QDNSVRVFKT 171 (183)
Q Consensus 162 ~dg~i~iwd~ 171 (183)
..+.|..||.
T Consensus 207 ~~~~i~~~~~ 216 (300)
T 2qc5_A 207 MGNKIGRITT 216 (300)
T ss_dssp TTTEEEEECT
T ss_pred CCCEEEEEcC
Confidence 6678999987
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.39 E-value=1.6e-05 Score=57.72 Aligned_cols=148 Identities=9% Similarity=-0.042 Sum_probs=95.6
Q ss_pred EEEeecCcEEEEEEeccCCCCc--ccccccCccceEEEeccCCCeeEEEEccCCe-EEEEe----------CCCeEEEEE
Q psy2113 13 VIFMTVGALLTLTNIEVTSLPS--FFQLILQKTPLITLKGHKEAISAVQWTAVDE-IITSS----------WDHTLKIWD 79 (183)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~----------~d~~v~vwd 79 (183)
.+..|++..+.+.+...+.... ...+..+.+.+.++.....+ . +.++|+++ ++.++ .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4567889888888754221111 11244566677777665555 4 99999987 44443 367899999
Q ss_pred cCCCCCccCceeEEEeecC-------CcceEEEEEecCCCCEEEEEeC--CCeEEEEeCCCCCcceEEeccCCCcEEEEE
Q psy2113 80 AELGGMKKGAIVKSTFSSH-------KEWVQSVRWSPIDPQLFVSASF--DNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150 (183)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 150 (183)
..+.+. ...+.-. ......+.++| ++++++.+.. ++.|.++|+.+.+. +..+.-.. . ...
T Consensus 116 ~~t~~v------~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~v-v~tI~v~g--~-~~~ 184 (386)
T 3sjl_D 116 PVTLLP------TADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAF-KRMLDVPD--C-YHI 184 (386)
T ss_dssp TTTCCE------EEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEE-EEEEECCS--E-EEE
T ss_pred CCCCeE------EEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcE-EEEEECCC--c-cee
Confidence 988764 3333211 12456789999 7777776653 68999999999875 44443221 1 122
Q ss_pred ecC-CcEEEEecCCCcEEEEEecC
Q psy2113 151 WSD-YRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 151 ~~~-~~~l~~~~~dg~i~iwd~~~ 173 (183)
+.. ...+++.+.||++.+.++..
T Consensus 185 ~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 185 FPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEEETTEEEEEETTSCEEEEECCS
T ss_pred ecCCCceeEEECCCCCEEEEECCC
Confidence 322 25677888899999999876
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.29 E-value=0.00026 Score=51.33 Aligned_cols=120 Identities=7% Similarity=-0.118 Sum_probs=76.2
Q ss_pred cCccceEEEeccCCCeeEEEEccCCe-EEEEe----------CCCeEEEEEcCCCCCccCceeEEEeecC-------Ccc
Q psy2113 40 LQKTPLITLKGHKEAISAVQWTAVDE-IITSS----------WDHTLKIWDAELGGMKKGAIVKSTFSSH-------KEW 101 (183)
Q Consensus 40 ~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~----------~d~~v~vwd~~~~~~~~~~~~~~~~~~~-------~~~ 101 (183)
.+.+.+..+.....+ .+.++|+++ ++.+. .++.|.+||..+.+. ...+... ...
T Consensus 55 ~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~------~~~i~~~~~~~~~~g~~ 126 (373)
T 2mad_H 55 GSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP------IADIELPDAPRFDVGPY 126 (373)
T ss_pred CCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE------EEEEECCCccccccCCC
Confidence 345556666554444 999999987 44443 367899999986554 2222111 123
Q ss_pred eEEEEEecCCCCEEEEEeC--CCeEEEEeCCCCCcceEE-eccCCCcEEEEEec-C-CcEEEEecCCCcEEEEEecCCC
Q psy2113 102 VQSVRWSPIDPQLFVSASF--DNSVKLWDLRSPKVPLFD-MLGHEDKVMCVNWS-D-YRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 102 v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
...+.++| ++++++.+.. ++.|.++| .+++. +.. +. .... +.+. . ...+++.+.||.+.++|. +++
T Consensus 127 p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~-~~~~i~-~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 127 SWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSS-DDQLLS-SPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred ccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCE-EeEEcC-CCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 45889999 7888777764 57899999 88764 444 32 2222 2232 2 256677788999999998 544
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.24 E-value=1.3e-07 Score=68.48 Aligned_cols=106 Identities=16% Similarity=0.080 Sum_probs=56.7
Q ss_pred cCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc
Q psy2113 62 AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG 141 (183)
Q Consensus 62 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 141 (183)
.++.+++++.|+.++.||..+++. ...+.. ..+.+..+.+ ++..+++++.|+.|+.||.++++. +.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~------~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~-~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI------KWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEG-LTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE------EEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CC-SEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE------EEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCce-eeeeec
Confidence 357789999999999999998875 445544 3444444455 566778888999999999988765 333322
Q ss_pred CCC-cEE-EEEecCCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 142 HED-KVM-CVNWSDYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 142 ~~~-~v~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+.. .+. ......+..+++++.|+.|+.||.++++..
T Consensus 78 ~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~ 115 (369)
T 2hz6_A 78 TIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQ 115 (369)
T ss_dssp CHHHHHTTCSCC-----CCCCEEEEEEEEECCC-----
T ss_pred cCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEE
Confidence 210 010 001112356667777788888887776654
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.16 E-value=0.00053 Score=47.25 Aligned_cols=155 Identities=8% Similarity=-0.043 Sum_probs=89.5
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCC-CeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKE-AISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|++++.++....... .-.....+..+.+.+..+.-... ....+.+.. ++ +++.-.++.+.++|..+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~-~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v-- 98 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYG-RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSN-- 98 (266)
T ss_dssp EEEEEECSTTEEEEEECSTT-TCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEE--
T ss_pred cccEEEeCCCeEEEECCCCC-CCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcE--
Confidence 46899999875555432110 00001113445555555542222 223555553 45 45556789999999987664
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec-cC-C---CcEEEEEecCCcEEEEecC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GH-E---DKVMCVNWSDYRYIMSGGQ 162 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~-~---~~v~~~~~~~~~~l~~~~~ 162 (183)
...+...... ...+++ ++..++.+..++.|.++|..+.+. ...+. +. . ..++.+.|.++...+....
T Consensus 99 ----~~~i~~g~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v-~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~ 170 (266)
T 2iwa_A 99 ----IKNFTHQMKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKL-IKKHNVKYNGHRVIRLNELEYINGEVWANIWQ 170 (266)
T ss_dssp ----EEEEECCSSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred ----EEEEECCCCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcE-EEEEEECCCCcccccceeEEEECCEEEEecCC
Confidence 3344321111 233556 444444445688999999998775 33332 21 1 2367888886655566666
Q ss_pred CCcEEEEEecCCCC
Q psy2113 163 DNSVRVFKTKHQPK 176 (183)
Q Consensus 163 dg~i~iwd~~~~~~ 176 (183)
++.|.+.|+.+++.
T Consensus 171 ~~~V~vID~~tg~V 184 (266)
T 2iwa_A 171 TDCIARISAKDGTL 184 (266)
T ss_dssp SSEEEEEETTTCCE
T ss_pred CCeEEEEECCCCcE
Confidence 88999999988764
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.16 E-value=0.00039 Score=54.43 Aligned_cols=157 Identities=15% Similarity=0.143 Sum_probs=88.6
Q ss_pred eEEEEEeecCcEEEEEEeccCCC-CcccccccCc-cceEEEeccCCCeeEEEEccCCeEE-EEeC---CCeEEEEEcCCC
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSL-PSFFQLILQK-TPLITLKGHKEAISAVQWTAVDEII-TSSW---DHTLKIWDAELG 83 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~l~-s~~~---d~~v~vwd~~~~ 83 (183)
..+..++|+|+.+++.......- ..+..+.... .....+..+.+.......++++.|+ .... .+.|.++|+.+.
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANP 315 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 46788999999887765322211 1111122222 2445666676666665333455654 4433 367999998765
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe-CCC--eEEEEeCCCCCcceEEec-cCCCcEEEEEecCC-cEEE
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDN--SVKLWDLRSPKVPLFDML-GHEDKVMCVNWSDY-RYIM 158 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg--~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~l~ 158 (183)
.... ...+..|...+. .|++ +++.|+... .++ .|++||+.... ...+. .....+..+.++++ ..++
T Consensus 316 ~~~~----~~~l~~~~~~~~--~~s~-~g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~ 386 (693)
T 3iuj_A 316 GPAH----WRDLIPERQQVL--TVHS-GSGYLFAEYMVDATARVEQFDYEGKR--VREVALPGLGSVSGFNGKHDDPALY 386 (693)
T ss_dssp CGGG----CEEEECCCSSCE--EEEE-ETTEEEEEEEETTEEEEEEECTTSCE--EEEECCSSSSEEEECCCCTTCSCEE
T ss_pred Cccc----cEEEecCCCCEE--EEEE-ECCEEEEEEEECCeeEEEEEECCCCe--eEEeecCCCceEEeeecCCCCCEEE
Confidence 4311 124455655555 8888 555555544 454 68899987543 23332 34456667777743 4443
Q ss_pred EecCC----CcEEEEEecCCC
Q psy2113 159 SGGQD----NSVRVFKTKHQP 175 (183)
Q Consensus 159 ~~~~d----g~i~iwd~~~~~ 175 (183)
....+ +.|..||+.+++
T Consensus 387 ~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 387 FGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEECSSSCCEEEEECTTTCC
T ss_pred EEecCCCCCCEEEEEECCCCe
Confidence 33333 678889887654
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.13 E-value=3e-07 Score=66.56 Aligned_cols=126 Identities=12% Similarity=0.033 Sum_probs=60.3
Q ss_pred cccCccceEEEeccCCCeeEEEEccCC-eEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCc-ceEE-EEEecCCCCE
Q psy2113 38 LILQKTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE-WVQS-VRWSPIDPQL 114 (183)
Q Consensus 38 ~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~-~v~~-~~~~p~~~~~ 114 (183)
+..+++.+..+.. +.+.+..+..++ .+++++.|+.++.||..+++. ......+.. .+.+ ..+. .+..
T Consensus 25 d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~------~w~~~~~~~~~~~~sp~~~--~~~~ 94 (369)
T 2hz6_A 25 SKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG------LTKLPFTIPELVQASPCRS--SDGI 94 (369)
T ss_dssp ETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC------SEECSCCHHHHHTTCSCC-------
T ss_pred ECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce------eeeeeccCccccccCceEe--cCCE
Confidence 3446666666665 455554445555 467778999999999987664 222221111 1100 0011 2346
Q ss_pred EEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCCC
Q psy2113 115 FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 115 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
+++++.|+.++.||.++++. ...+..+.. ..++ .+..+++++.|+.|+.||.++++..-
T Consensus 95 v~~g~~dg~v~a~D~~tG~~-~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 95 LYMGKKQDIWYVIDLLTGEK-QQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred EEEEeCCCEEEEEECCCCcE-EEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 77788899999999999875 444433321 2233 34788889999999999999887543
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.06 E-value=0.001 Score=48.15 Aligned_cols=150 Identities=8% Similarity=-0.037 Sum_probs=83.1
Q ss_pred EEEEeecCcEEEEEEeccCC------CC-cccccccCccceEEEecc-------CCCeeEEEEccCCe-EEEEeC--CCe
Q psy2113 12 GVIFMTVGALLTLTNIEVTS------LP-SFFQLILQKTPLITLKGH-------KEAISAVQWTAVDE-IITSSW--DHT 74 (183)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~-l~s~~~--d~~ 74 (183)
.++|+|+++.+.+.+-.... -. ....+....+.+..+..- ...-..+.|+|+++ |+.+.. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 89999999998887621000 00 001122234444443321 12345789999887 555553 578
Q ss_pred EEEEEcCCCCCccCceeEEE-eecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec-----cCCCcE-E
Q psy2113 75 LKIWDAELGGMKKGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-----GHEDKV-M 147 (183)
Q Consensus 75 v~vwd~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-----~~~~~v-~ 147 (183)
|.++| .+++. ... +. ... ++.+.|...+.+++.+.||.+.++|. +++. ..... ....++ .
T Consensus 150 v~viD-~t~~~------~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~-~~~~~~~~~~~~~~p~~~ 216 (373)
T 2mad_H 150 VGLVV-QGGSS------DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGA-AGAGLVGAMLTAAQNLLT 216 (373)
T ss_pred EEEEE-CCCCE------EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcE-EEEEeccccccCCcceee
Confidence 99999 87664 223 22 111 24556645567777888999999999 7664 31211 111121 2
Q ss_pred EEEecC-CcEEEEecCCCcEEEEEecCC
Q psy2113 148 CVNWSD-YRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 148 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~ 174 (183)
...+.+ +..++..+.++.+.+.|+...
T Consensus 217 ~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 217 QPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred cceeEecCCEEEEEcCCceEEEEeccCC
Confidence 233442 233333346778888887643
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.98 E-value=7.1e-05 Score=54.38 Aligned_cols=95 Identities=12% Similarity=-0.034 Sum_probs=66.2
Q ss_pred CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe----------CCCeEEEEeCCCCCcceEEecc
Q psy2113 72 DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS----------FDNSVKLWDLRSPKVPLFDMLG 141 (183)
Q Consensus 72 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~ 141 (183)
++.|.+.|..+.+. ...+.....+ . +.++| +++.++.+. .++.|.+||..+.+. +..+.-
T Consensus 58 ~~~V~ViD~~t~~v------~~~I~vG~~P-~-va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v-~~~I~v 127 (386)
T 3sjl_D 58 VTQQFVIDGEAGRV------IGMIDGGFLP-N-PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP-TADIEL 127 (386)
T ss_dssp SEEEEEEETTTTEE------EEEEEECSSC-E-EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEE
T ss_pred CCEEEEEECCCCeE------EEEEECCCCC-c-EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeE-EEEEEC
Confidence 67999999988765 4445443444 4 99999 676665554 367899999999875 444321
Q ss_pred C-------CCcEEEEEecCC-cEEEEecC--CCcEEEEEecCCCC
Q psy2113 142 H-------EDKVMCVNWSDY-RYIMSGGQ--DNSVRVFKTKHQPK 176 (183)
Q Consensus 142 ~-------~~~v~~~~~~~~-~~l~~~~~--dg~i~iwd~~~~~~ 176 (183)
. ......+.++|+ ++++++.. ++.|.++|+.+.+.
T Consensus 128 ~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 128 PDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp TTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 1 124567899965 77776653 68999999988764
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.97 E-value=0.00015 Score=51.00 Aligned_cols=125 Identities=11% Similarity=0.023 Sum_probs=77.5
Q ss_pred CccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC
Q psy2113 41 QKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 120 (183)
Q Consensus 41 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 120 (183)
..+.+.........+.++...+++.+..++.++.+..+|.. +.. ...+......+..+...+ ++ .+..++.
T Consensus 203 ~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~-g~~------~~~~~~~~~~~~~~~~~~-~g-~l~v~t~ 273 (330)
T 3hxj_A 203 DGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD-GTE------KWRFKTGKRIESSPVIGN-TD-TIYFGSY 273 (330)
T ss_dssp TSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECTT-SCE------EEEEECSSCCCSCCEECT-TS-CEEEECT
T ss_pred CCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECCC-CCE------eEEeeCCCCccccceEcC-CC-eEEEecC
Confidence 33444455445566778888888888888888888888743 222 233333333334455554 44 5666777
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+|.+..+|. +++. ..........+.++...++..|..++.+|.+++...+..+.
T Consensus 274 ~ggl~~~d~-~g~~-~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~~~ 327 (330)
T 3hxj_A 274 DGHLYAINP-DGTE-KWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEHHH 327 (330)
T ss_dssp TCEEEEECT-TSCE-EEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC-----
T ss_pred CCCEEEECC-CCcE-EEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccccc
Confidence 889999996 5553 44444444556667776667788899999999987665443
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.96 E-value=0.0016 Score=44.63 Aligned_cols=152 Identities=13% Similarity=0.064 Sum_probs=87.6
Q ss_pred eeEEEEEeecCcEEEEEEecc-CCCCcccccccCccceEEEeccCCCeeE--EEEccCCe-EEEEeCCCeEEEEEcCCCC
Q psy2113 9 LTLGVIFMTVGALLTLTNIEV-TSLPSFFQLILQKTPLITLKGHKEAISA--VQWTAVDE-IITSSWDHTLKIWDAELGG 84 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~--~~~~~~~~-l~s~~~d~~v~vwd~~~~~ 84 (183)
.+-++.|+ ++.++....... ..+. ..+..+++.+..+.... ..+. +.... ++ +++.-.++.+.++|..+.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~--~vD~~Tgkv~~~~~l~~-~~FgeGit~~g-~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIR--KVDIESGKTLQQIELGK-RYFGEGISDWK-DKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEE--EECTTTCCEEEEEECCT-TCCEEEEEEET-TEEEEEESSSSEEEEEETTTCC
T ss_pred ccceEEEE-CCEEEEECCCCCCceEE--EEECCCCcEEEEEecCC-ccceeEEEEeC-CEEEEEEeeCCEEEEEECccCc
Confidence 34678887 565554443210 0010 11344556666655433 3333 44433 45 4455568999999998877
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc----CC-CcEEEEEecCCcEEEE
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG----HE-DKVMCVNWSDYRYIMS 159 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----~~-~~v~~~~~~~~~~l~~ 159 (183)
. ...+... ..-..+ ++ ++..++....++.|.++|..+.+. ...+.- .. ..++.+.|.++...+.
T Consensus 119 ~------~~ti~~~-~eG~gl--t~-dg~~L~~SdGs~~i~~iDp~T~~v-~~~I~V~~~g~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 119 Q------VRSFNYD-GEGWGL--TH-NDQYLIMSDGTPVLRFLDPESLTP-VRTITVTAHGEELPELNELEWVDGEIFAN 187 (262)
T ss_dssp E------EEEEECS-SCCCCE--EE-CSSCEEECCSSSEEEEECTTTCSE-EEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred E------EEEEECC-CCceEE--ec-CCCEEEEECCCCeEEEEcCCCCeE-EEEEEeccCCccccccceeEEECCEEEEE
Confidence 5 4444322 222333 35 445555555578899999998875 333322 11 3356678887666666
Q ss_pred ecCCCcEEEEEecCCCC
Q psy2113 160 GGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 160 ~~~dg~i~iwd~~~~~~ 176 (183)
...+..|.+.|+++++.
T Consensus 188 ~w~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 188 VWQTNKIVRIDPETGKV 204 (262)
T ss_dssp ETTSSEEEEECTTTCBE
T ss_pred EccCCeEEEEECCCCcE
Confidence 66788899999887764
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.95 E-value=0.00051 Score=48.06 Aligned_cols=106 Identities=8% Similarity=0.090 Sum_probs=72.1
Q ss_pred ccceEEEeccCCCeeEEEEccCCe--EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe
Q psy2113 42 KTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS 119 (183)
Q Consensus 42 ~~~~~~~~~h~~~v~~~~~~~~~~--l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 119 (183)
...+..+........+..|++++. +++...++.|..|+.. +. ...+..+...+..++++| +++++++..
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-------~~~~~~~~~~~~gl~~d~-dG~l~v~~~ 104 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-------VDVLLDATAFTNGNAVDA-QQRLVHCEH 104 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-------EEEEEESCSCEEEEEECT-TSCEEEEET
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-------EEEEeCCCCccceeeECC-CCCEEEEEC
Confidence 344556666667788999998765 6677788999999873 33 233444667789999999 788777666
Q ss_pred CCCeEEEEeCCCCCcceEEeccC-----CCcEEEEEecCC-cEEEE
Q psy2113 120 FDNSVKLWDLRSPKVPLFDMLGH-----EDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 120 ~dg~i~vwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~-~~l~~ 159 (183)
.++.|.+|+.. ++. ..+..+ ...++.+++.++ .++++
T Consensus 105 ~~~~v~~~~~~-g~~--~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 105 GRRAITRSDAD-GQA--HLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TTTEEEEECTT-SCE--EEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CCCEEEEECCC-CCE--EEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 66889999986 442 222211 134677889865 55555
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.92 E-value=0.0019 Score=44.24 Aligned_cols=156 Identities=8% Similarity=0.010 Sum_probs=88.3
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEE-eccCCCeeEEEEcc-CCeEEEEeC---CCeEEEEEcCCC
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITL-KGHKEAISAVQWTA-VDEIITSSW---DHTLKIWDAELG 83 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~l~s~~~---d~~v~vwd~~~~ 83 (183)
...++++++++..+...+.....+..+.. .......+ .........+++.| ++.|..+.. .+.|..+++...
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~---~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKM---DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEET---TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEc---CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 34678888876666655522111111111 11111222 22224568899998 566554443 468888887643
Q ss_pred CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCC
Q psy2113 84 GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQD 163 (183)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d 163 (183)
.. .......-.....++++|+++.++++-...+.|.++|...... ..... .......++...+..+++...+
T Consensus 157 ~~------~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~-~~~~P~gi~~d~~~lyva~~~~ 228 (267)
T 1npe_A 157 NR------RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR-RKVLE-GLQYPFAVTSYGKNLYYTDWKT 228 (267)
T ss_dssp CC------EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE-EEEEE-CCCSEEEEEEETTEEEEEETTT
T ss_pred Cc------EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce-EEEec-CCCCceEEEEeCCEEEEEECCC
Confidence 32 1111122345789999994445556666678999999975432 22222 2234466766654555666667
Q ss_pred CcEEEEEecCCC
Q psy2113 164 NSVRVFKTKHQP 175 (183)
Q Consensus 164 g~i~iwd~~~~~ 175 (183)
+.|..+|..+++
T Consensus 229 ~~v~~~d~~~g~ 240 (267)
T 1npe_A 229 NSVIAMDLAISK 240 (267)
T ss_dssp TEEEEEETTTTE
T ss_pred CeEEEEeCCCCC
Confidence 899999987654
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.91 E-value=0.00031 Score=48.26 Aligned_cols=121 Identities=6% Similarity=-0.023 Sum_probs=77.3
Q ss_pred ceEEEeccCCC--eeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC
Q psy2113 44 PLITLKGHKEA--ISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 121 (183)
Q Consensus 44 ~~~~~~~h~~~--v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 121 (183)
.+.++ .|... ...+.|..+..+.+.+.++.|+++|+++++... .+......--.+++. +..+.+..-.+
T Consensus 45 Vv~~~-phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~------~~l~~~~FgeGit~~--g~~Ly~ltw~~ 115 (268)
T 3nok_A 45 IIREY-PHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVW------MERLGNIFAEGLASD--GERLYQLTWTE 115 (268)
T ss_dssp EEEEE-ECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSE------EEECTTCCEEEEEEC--SSCEEEEESSS
T ss_pred EEEEE-cCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEe------EECCCCcceeEEEEe--CCEEEEEEccC
Confidence 34455 34433 468888754446788888999999999887632 221111112334443 34566666678
Q ss_pred CeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 122 NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 122 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+.+.+||..+.+. +..+.. ...-..+++.. ..|+.+..++.|.++|..+.+.
T Consensus 116 ~~v~V~D~~Tl~~-~~ti~~-~~eGwGLt~Dg-~~L~vSdGs~~l~~iDp~T~~v 167 (268)
T 3nok_A 116 GLLFTWSGMPPQR-ERTTRY-SGEGWGLCYWN-GKLVRSDGGTMLTFHEPDGFAL 167 (268)
T ss_dssp CEEEEEETTTTEE-EEEEEC-SSCCCCEEEET-TEEEEECSSSEEEEECTTTCCE
T ss_pred CEEEEEECCcCcE-EEEEeC-CCceeEEecCC-CEEEEECCCCEEEEEcCCCCeE
Confidence 9999999999875 555543 23335555543 5555555688999999888654
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.87 E-value=0.00034 Score=49.93 Aligned_cols=121 Identities=7% Similarity=0.005 Sum_probs=73.7
Q ss_pred CCeeEEEEccCCeE-EEEe--CCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC-----CCeE
Q psy2113 53 EAISAVQWTAVDEI-ITSS--WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-----DNSV 124 (183)
Q Consensus 53 ~~v~~~~~~~~~~l-~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-----dg~i 124 (183)
.....+++++++++ ++.. .++.++||.+.+++...-.........+-..+..++++| +++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCCCeE
Confidence 67889999988875 4533 234356666643221100000001123456799999999 7777666543 5799
Q ss_pred EEEeCCCCCcceEEecc------CCCcEEEEEecC-CcE-EEEec---CCCcEEEEEecCCC
Q psy2113 125 KLWDLRSPKVPLFDMLG------HEDKVMCVNWSD-YRY-IMSGG---QDNSVRVFKTKHQP 175 (183)
Q Consensus 125 ~vwd~~~~~~~~~~~~~------~~~~v~~~~~~~-~~~-l~~~~---~dg~i~iwd~~~~~ 175 (183)
.+||+.+++. ...+.. +...+..+++++ +.. +++.. .++.|.+||+.+++
T Consensus 96 ~~~d~~tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~ 156 (343)
T 2qe8_A 96 VAWDTLNNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL 156 (343)
T ss_dssp EEEETTTTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC
T ss_pred EEEECCCCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC
Confidence 9999998763 333321 223568899984 344 45555 67899999987653
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.87 E-value=0.0014 Score=51.21 Aligned_cols=54 Identities=13% Similarity=0.184 Sum_probs=38.7
Q ss_pred CeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 122 NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 122 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
|.|..||+.+++. +-... +..++....+. .+..++.++.||.+++||.++++..
T Consensus 457 g~l~A~D~~tG~~-~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 457 GRLLAWDPVAQKA-AWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp EEEEEEETTTTEE-EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cEEEEEeCCCCcE-EeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 7899999999875 33332 33334443344 5578888999999999999988754
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.83 E-value=0.0027 Score=49.82 Aligned_cols=55 Identities=13% Similarity=0.155 Sum_probs=39.4
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+|.|..||+.+++. +-....+. ++..-.+. .+.+++.++.||.|+.||.++++..
T Consensus 454 ~g~l~A~D~~tG~~-~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 454 SGKLIAWDPVKQQA-AWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEETTTTEE-EEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeEEEEECCCCCe-EeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 37899999999875 44443332 23322333 5688999999999999999998764
No 230
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.81 E-value=0.0023 Score=43.41 Aligned_cols=121 Identities=7% Similarity=-0.009 Sum_probs=75.1
Q ss_pred ceEEEeccCC--CeeEEEEccCCeEEEEeCC--CeEEEEEcCCCCCccCceeEEEeecCCcc-eEEEEEecCCCCEEEEE
Q psy2113 44 PLITLKGHKE--AISAVQWTAVDEIITSSWD--HTLKIWDAELGGMKKGAIVKSTFSSHKEW-VQSVRWSPIDPQLFVSA 118 (183)
Q Consensus 44 ~~~~~~~h~~--~v~~~~~~~~~~l~s~~~d--~~v~vwd~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~p~~~~~l~~~ 118 (183)
.+.++ .|.. -...+.|+++..+.+.+.+ ..|+++|+.+++. .......... --.++.. +..+....
T Consensus 11 v~~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv------~~~~~l~~~~fgeGi~~~--~~~ly~lt 81 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRI------LQRAEVPPPYFGAGIVAW--RDRLIQLT 81 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCE------EEEEECCTTCCEEEEEEE--TTEEEEEE
T ss_pred EEEEc-CCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCE------EEEEeCCCCcceeEEEEe--CCEEEEEE
Confidence 34455 4544 3568999873335666665 4899999998875 3333222211 1234443 44566666
Q ss_pred eCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 119 SFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 119 ~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
-.++.+.++|..+.+. +..+... ..-..+++.. ..|+.+..++.|.++|..+.+.
T Consensus 82 w~~~~v~v~D~~tl~~-~~ti~~~-~~Gwglt~dg-~~L~vSdgs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 82 WRNHEGFVYDLATLTP-RARFRYP-GEGWALTSDD-SHLYMSDGTAVIRKLDPDTLQQ 136 (243)
T ss_dssp SSSSEEEEEETTTTEE-EEEEECS-SCCCEEEECS-SCEEEECSSSEEEEECTTTCCE
T ss_pred eeCCEEEEEECCcCcE-EEEEeCC-CCceEEeeCC-CEEEEECCCCeEEEEeCCCCeE
Confidence 6789999999999875 5555432 2335666544 4444445688999999887654
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.77 E-value=0.00086 Score=49.45 Aligned_cols=124 Identities=10% Similarity=-0.068 Sum_probs=78.2
Q ss_pred cccCccceEEEeccCCCeeEEEEccCCe-EEEEe----------CCCeEEEEEcCCCCCccCceeEEEeecC-------C
Q psy2113 38 LILQKTPLITLKGHKEAISAVQWTAVDE-IITSS----------WDHTLKIWDAELGGMKKGAIVKSTFSSH-------K 99 (183)
Q Consensus 38 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~----------~d~~v~vwd~~~~~~~~~~~~~~~~~~~-------~ 99 (183)
+..+.+.+.++..-..+ .+.++|+++ ++.+. .++.|.++|..+.+. ...+.-. .
T Consensus 105 D~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v------v~~I~v~g~~r~~~g 176 (426)
T 3c75_H 105 DGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP------IADIELPDAPRFLVG 176 (426)
T ss_dssp ETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE------EEEEEETTCCCCCBS
T ss_pred ECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE------EEEEECCCccccccC
Confidence 34566667777655556 899999887 54443 467899999988765 3333211 1
Q ss_pred cceEEEEEecCCCCEEEEEeC--CCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecC
Q psy2113 100 EWVQSVRWSPIDPQLFVSASF--DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 100 ~~v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~ 173 (183)
.....+.++| ++++++.+.. ++.|.+.|+.+.+. +..+.-.. ...+.......+++.+.||++.+.+..+
T Consensus 177 ~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kv-v~~I~v~g--~~~~~p~g~~~~v~~~~dG~~~~V~~~~ 248 (426)
T 3c75_H 177 TYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTF-DRMLDVPD--CYHIFPASPTVFYMNCRDGSLARVDFAD 248 (426)
T ss_dssp CCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEE-EEEEECCS--EEEEEEEETTEEEEEETTSSEEEEECCT
T ss_pred CCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeE-EEEEEcCC--ceeeccCCCcEEEEEcCCCCEEEEECCC
Confidence 2346789999 7777777663 57899999999875 44443211 1111111225566666777777777633
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.74 E-value=0.00046 Score=48.45 Aligned_cols=116 Identities=14% Similarity=0.093 Sum_probs=72.3
Q ss_pred cceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC
Q psy2113 43 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122 (183)
Q Consensus 43 ~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 122 (183)
+...........+.++...+++.+..++.++.+..+|.. ++. ...+......+.++...+ ++.+++.. +
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~------~~~~~~~~~~~~~~~~d~-~g~l~v~t---~ 195 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTE------KWRFKTNDAITSAASIGK-DGTIYFGS---D 195 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCE------EEEEECSSCCCSCCEECT-TCCEEEES---S
T ss_pred CEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCE------eEEEecCCCceeeeEEcC-CCEEEEEe---C
Confidence 344444444555666666677888888888999999987 443 333333444566666666 55554443 7
Q ss_pred eEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEe
Q psy2113 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKT 171 (183)
Q Consensus 123 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~ 171 (183)
.+..+| .+++. ..........+.++...++..+..++.++.|..+|.
T Consensus 196 ~l~~~d-~~g~~-~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~ 242 (330)
T 3hxj_A 196 KVYAIN-PDGTE-KWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP 242 (330)
T ss_dssp SEEEEC-TTSCE-EEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT
T ss_pred EEEEEC-CCCcE-EEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC
Confidence 788888 55553 334444445566667766556666777777777763
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.72 E-value=0.0046 Score=42.61 Aligned_cols=123 Identities=7% Similarity=0.077 Sum_probs=76.3
Q ss_pred cceEEEeccCC--CeeEEEEccCCeEEEEe-C--CCeEEEEEcCCCCCccCceeEEEeec-CCcceEEEEEecCCCCEEE
Q psy2113 43 TPLITLKGHKE--AISAVQWTAVDEIITSS-W--DHTLKIWDAELGGMKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFV 116 (183)
Q Consensus 43 ~~~~~~~~h~~--~v~~~~~~~~~~l~s~~-~--d~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~ 116 (183)
+.+.++. |.. ....+.|++++.|..++ . ++.|++.|+.+++. ...+.- .......+++. +..+.+
T Consensus 10 ~vv~~~p-~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v------~~~i~l~~~~fgeGi~~~--g~~lyv 80 (266)
T 2iwa_A 10 EVLNEFP-HDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKV------ENIHKMDDSYFGEGLTLL--NEKLYQ 80 (266)
T ss_dssp EEEEEEE-CCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCE------EEEEECCTTCCEEEEEEE--TTEEEE
T ss_pred eEEEEEE-CCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCE------EEEEecCCCcceEEEEEe--CCEEEE
Confidence 3445553 443 35799999877765543 3 58999999998875 333321 11223345554 345666
Q ss_pred EEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 117 SASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 117 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
+.-.++.+.++|..+.+. +..+......-..+.+. ++.++.+..++.|.++|..+.+.
T Consensus 81 ~t~~~~~v~viD~~t~~v-~~~i~~g~~~g~glt~D-g~~l~vs~gs~~l~viD~~t~~v 138 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSN-IKNFTHQMKDGWGLATD-GKILYGSDGTSILYEIDPHTFKL 138 (266)
T ss_dssp EETTCSEEEEEETTTTEE-EEEEECCSSSCCEEEEC-SSSEEEECSSSEEEEECTTTCCE
T ss_pred EEecCCEEEEEECCCCcE-EEEEECCCCCeEEEEEC-CCEEEEECCCCeEEEEECCCCcE
Confidence 666789999999998775 44443221233445554 44444455688999999887653
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.68 E-value=0.0028 Score=43.47 Aligned_cols=119 Identities=7% Similarity=0.055 Sum_probs=74.4
Q ss_pred ceEEEeccCCC--eeEEEEccCCe-EEEEeCCC--eEEEEEcCCCCCccCceeEEEeecCCcceE--EEEEecCCCCEEE
Q psy2113 44 PLITLKGHKEA--ISAVQWTAVDE-IITSSWDH--TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ--SVRWSPIDPQLFV 116 (183)
Q Consensus 44 ~~~~~~~h~~~--v~~~~~~~~~~-l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~p~~~~~l~ 116 (183)
.+.++ .|... ...|.|+ ++. +.+.+.+| .|+++|+.+++. ...+... .... .+... +..+.+
T Consensus 33 vv~~~-phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv------~~~~~l~-~~~FgeGit~~--g~~ly~ 101 (262)
T 3nol_A 33 IVHSY-PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKT------LQQIELG-KRYFGEGISDW--KDKIVG 101 (262)
T ss_dssp EEEEE-ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCE------EEEEECC-TTCCEEEEEEE--TTEEEE
T ss_pred EEEEe-cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcE------EEEEecC-CccceeEEEEe--CCEEEE
Confidence 34455 35443 4788998 456 55666665 899999998875 3333322 2232 34443 345555
Q ss_pred EEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 117 SASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 117 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
..-.++.+.++|..+.+. +..+... ..-..+++. +..|+.+..++.|.++|..+.+.
T Consensus 102 ltw~~~~v~v~D~~t~~~-~~ti~~~-~eG~glt~d-g~~L~~SdGs~~i~~iDp~T~~v 158 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQ-VRSFNYD-GEGWGLTHN-DQYLIMSDGTPVLRFLDPESLTP 158 (262)
T ss_dssp EESSSSEEEEEETTTCCE-EEEEECS-SCCCCEEEC-SSCEEECCSSSEEEEECTTTCSE
T ss_pred EEeeCCEEEEEECccCcE-EEEEECC-CCceEEecC-CCEEEEECCCCeEEEEcCCCCeE
Confidence 555689999999999886 5555432 233455544 45555555578899999887653
No 235
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.64 E-value=0.008 Score=47.62 Aligned_cols=157 Identities=10% Similarity=0.009 Sum_probs=83.3
Q ss_pred eeEEEEEe-ecCcEEEEEEeccCCCC--cccccccCc-cce-EEEeccCCCeeEEEEccCCe-EEEEeCC-----CeEEE
Q psy2113 9 LTLGVIFM-TVGALLTLTNIEVTSLP--SFFQLILQK-TPL-ITLKGHKEAISAVQWTAVDE-IITSSWD-----HTLKI 77 (183)
Q Consensus 9 ~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~-~~~~~h~~~v~~~~~~~~~~-l~s~~~d-----~~v~v 77 (183)
...+..|| |+|..++...-..-.-. ....+...+ +.+ ..+.. ....+.|+|+++ |+....+ ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC---ceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 44567899 99998886542211100 011122222 111 01111 134688998875 5555444 36778
Q ss_pred EEcCCCCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeC---CCeEEEEeCCCCCcce--EEe-ccCCCcEEEEE
Q psy2113 78 WDAELGGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASF---DNSVKLWDLRSPKVPL--FDM-LGHEDKVMCVN 150 (183)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~---dg~i~vwd~~~~~~~~--~~~-~~~~~~v~~~~ 150 (183)
+++.+..... ...+. ........+.|+| ++++|+..+. ...|+++|+.++.... ..+ ........++.
T Consensus 252 ~~lgt~~~~~----~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 252 HVMGKLQSED----VCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EETTSCGGGC----EEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred EECCCCchhc----EEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 8876643211 11222 2234467889999 7776665442 3468889998763212 333 33445667787
Q ss_pred ecCCc-EEEEecCC--C--cEEEEEecC
Q psy2113 151 WSDYR-YIMSGGQD--N--SVRVFKTKH 173 (183)
Q Consensus 151 ~~~~~-~l~~~~~d--g--~i~iwd~~~ 173 (183)
|+.+. +++....+ + .|..+|+.+
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 77664 44444443 2 566666654
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.64 E-value=0.00073 Score=49.99 Aligned_cols=153 Identities=9% Similarity=0.049 Sum_probs=90.3
Q ss_pred EEEEe--ecCcEEEEEEeccCCCCcccc--cccCccceEEEe-------ccCCCeeEEEEccCCeEEEEeCC------Ce
Q psy2113 12 GVIFM--TVGALLTLTNIEVTSLPSFFQ--LILQKTPLITLK-------GHKEAISAVQWTAVDEIITSSWD------HT 74 (183)
Q Consensus 12 ~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~l~s~~~d------~~ 74 (183)
+.+++ ++++.+.+.++..-.+..+.. +....+....++ .....-..+...|++.++++..+ +.
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGG 165 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCE
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCe
Confidence 33556 788888887755433333221 122234444442 01113345667788866665555 78
Q ss_pred EEEEEcCCCCCccCceeEEEeec--C-CcceEEEEEecCCCCEEEEEe-------------------CCCeEEEEeCCCC
Q psy2113 75 LKIWDAELGGMKKGAIVKSTFSS--H-KEWVQSVRWSPIDPQLFVSAS-------------------FDNSVKLWDLRSP 132 (183)
Q Consensus 75 v~vwd~~~~~~~~~~~~~~~~~~--~-~~~v~~~~~~p~~~~~l~~~~-------------------~dg~i~vwd~~~~ 132 (183)
+.+.|..+.+. ...+.. . ...-..+.|+| +.+.+++.. .+..|.+||+.+.
T Consensus 166 v~vlD~~T~~v------~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 166 ILMLDHYSFEP------LGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp EEEECTTTCCE------EEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred EEEEECCCCeE------EEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 99999987765 333331 1 12245688899 777777774 3689999999986
Q ss_pred CcceEEeccC--CCcEEEEEe--cCC-cEEEEec------CCCcEEEEEec
Q psy2113 133 KVPLFDMLGH--EDKVMCVNW--SDY-RYIMSGG------QDNSVRVFKTK 172 (183)
Q Consensus 133 ~~~~~~~~~~--~~~v~~~~~--~~~-~~l~~~~------~dg~i~iwd~~ 172 (183)
+. +..+..- ......+.| +|+ .++++++ .+++|.+|...
T Consensus 239 k~-~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 239 KR-IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp EE-EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred cE-eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 54 4444432 134556666 665 6666555 56678765543
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.61 E-value=0.00044 Score=50.97 Aligned_cols=94 Identities=12% Similarity=-0.029 Sum_probs=65.7
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe----------CCCeEEEEeCCCCCcceEEeccC
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS----------FDNSVKLWDLRSPKVPLFDMLGH 142 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~----------~dg~i~vwd~~~~~~~~~~~~~~ 142 (183)
+.|.+.|..+.+. ...+.....+ .+.++| +++.++.+. .++.|.++|..+.+. +..+.-.
T Consensus 99 ~~VsVID~~t~~v------v~~I~vG~~P--gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v-v~~I~v~ 168 (426)
T 3c75_H 99 TQQFVIDGSTGRI------LGMTDGGFLP--HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP-IADIELP 168 (426)
T ss_dssp EEEEEEETTTTEE------EEEEEECSSC--EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE-EEEEEET
T ss_pred CeEEEEECCCCEE------EEEEECCCCC--ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCCCcE-EEEEECC
Confidence 7999999988765 4455433444 899999 666555554 467899999999875 4443211
Q ss_pred -------CCcEEEEEecCC-cEEEEecC--CCcEEEEEecCCCC
Q psy2113 143 -------EDKVMCVNWSDY-RYIMSGGQ--DNSVRVFKTKHQPK 176 (183)
Q Consensus 143 -------~~~v~~~~~~~~-~~l~~~~~--dg~i~iwd~~~~~~ 176 (183)
......+.++|+ ++++.+.. ++.|.+.|+.+.+.
T Consensus 169 g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 169 DAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp TCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 123467889965 77777653 67899999988754
No 238
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.59 E-value=0.0074 Score=41.47 Aligned_cols=125 Identities=6% Similarity=-0.125 Sum_probs=78.0
Q ss_pred ccCccceEEEeccCCCee--EEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEE
Q psy2113 39 ILQKTPLITLKGHKEAIS--AVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 116 (183)
Q Consensus 39 ~~~~~~~~~~~~h~~~v~--~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 116 (183)
..+++.+..+ - ....+ .+....+..++..-.++.+.++|..+.+. ...+.. ...-..++ + ++..|+
T Consensus 82 ~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~------~~ti~~-~~eGwGLt--~-Dg~~L~ 149 (268)
T 3nok_A 82 LESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR------ERTTRY-SGEGWGLC--Y-WNGKLV 149 (268)
T ss_dssp SSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE------EEEEEC-SSCCCCEE--E-ETTEEE
T ss_pred CCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE------EEEEeC-CCceeEEe--c-CCCEEE
Confidence 3455555555 2 22333 35555444455666789999999988765 344432 22223444 4 455555
Q ss_pred EEeCCCeEEEEeCCCCCcceEEecc--CC---CcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 117 SASFDNSVKLWDLRSPKVPLFDMLG--HE---DKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 117 ~~~~dg~i~vwd~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
....++.|.++|..+.+. ...+.- +. ..++.+.|.++...+....+..|.+.|+++++.
T Consensus 150 vSdGs~~l~~iDp~T~~v-~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 150 RSDGGTMLTFHEPDGFAL-VGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBE
T ss_pred EECCCCEEEEEcCCCCeE-EEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcE
Confidence 555688999999999875 433322 21 245778888776666666788999999888764
No 239
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.58 E-value=0.0074 Score=41.19 Aligned_cols=155 Identities=8% Similarity=0.064 Sum_probs=88.5
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccC-CeE-EEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAV-DEI-ITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l-~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..++++++++..+...+.....+..+. .........+.........+++.+. +.+ ++-...+.|.++++.....
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~--~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-- 113 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRAS--LHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-- 113 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEE--SSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEe--cCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE--
Confidence 357888987766666653221111111 1111111222222346789999874 554 4555678999999865332
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeC--CCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcE-EEEecCC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF--DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRY-IMSGGQD 163 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~d 163 (183)
.............++++|+++.++++... .+.|..+++..... .............+++++ +.. .++-...
T Consensus 114 ----~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~ 188 (267)
T 1npe_A 114 ----RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (267)
T ss_dssp ----EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred ----EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEcCCCCEEEEEECCC
Confidence 11122222457899999944544555433 46888888864332 222222334678999986 444 4556667
Q ss_pred CcEEEEEecC
Q psy2113 164 NSVRVFKTKH 173 (183)
Q Consensus 164 g~i~iwd~~~ 173 (183)
+.|..+|+..
T Consensus 189 ~~I~~~~~~g 198 (267)
T 1npe_A 189 HRAECLNPAQ 198 (267)
T ss_dssp TEEEEEETTE
T ss_pred CEEEEEecCC
Confidence 8899998764
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.57 E-value=0.0052 Score=44.12 Aligned_cols=104 Identities=9% Similarity=0.020 Sum_probs=65.7
Q ss_pred cCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc
Q psy2113 62 AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG 141 (183)
Q Consensus 62 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 141 (183)
.++.++.++.++.+..+|..+++. ................. +..++.++.++.+..+|.++++. .-....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~------~W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~-~W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTV------AWQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAV-KWTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCE------EEEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCE-EEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE------EEEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcE-EEEEeC
Confidence 567888899999999999988775 33333222111111222 33677788899999999999875 333322
Q ss_pred CCCcEE------EEEecCCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 142 HEDKVM------CVNWSDYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 142 ~~~~v~------~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
.. .+. ..... +..++.++.++.|..+|.++++..
T Consensus 172 ~~-~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 172 DM-PSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMI 211 (376)
T ss_dssp CC------CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEE
T ss_pred CC-CceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEE
Confidence 21 111 11111 457788888999999998876543
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.53 E-value=0.0086 Score=40.63 Aligned_cols=153 Identities=10% Similarity=0.006 Sum_probs=86.3
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCe-eEEEEccCCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAI-SAVQWTAVDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
+-++.|+. +.++.......-+. ....+..+++.+..+....... ..+.... ++ +...-.++.+.++|..+.+.
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~-v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~-- 97 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSS-VRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTP-- 97 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCE-EEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEE--
T ss_pred cccEEEEC-CEEEEECCCCCCce-EEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcE--
Confidence 45778876 44444433211000 0011344555555554333221 2344433 44 45556789999999988765
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc--CC---CcEEEEEecCCcEEEEecC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG--HE---DKVMCVNWSDYRYIMSGGQ 162 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~l~~~~~ 162 (183)
...+... ..-..++ + ++..|+....++.|.++|..+.+. ...+.- +. ..++.+.|.++...+....
T Consensus 98 ----~~ti~~~-~~Gwglt--~-dg~~L~vSdgs~~l~~iDp~t~~~-~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~ 168 (243)
T 3mbr_X 98 ----RARFRYP-GEGWALT--S-DDSHLYMSDGTAVIRKLDPDTLQQ-VGSIKVTAGGRPLDNLNELEWVNGELLANVWL 168 (243)
T ss_dssp ----EEEEECS-SCCCEEE--E-CSSCEEEECSSSEEEEECTTTCCE-EEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred ----EEEEeCC-CCceEEe--e-CCCEEEEECCCCeEEEEeCCCCeE-EEEEEEccCCcccccceeeEEeCCEEEEEECC
Confidence 4444422 2223444 4 344444445688999999998875 333332 11 3456777877766666666
Q ss_pred CCcEEEEEecCCCC
Q psy2113 163 DNSVRVFKTKHQPK 176 (183)
Q Consensus 163 dg~i~iwd~~~~~~ 176 (183)
+..|.+.|+++++.
T Consensus 169 s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 169 TSRIARIDPASGKV 182 (243)
T ss_dssp TTEEEEECTTTCBE
T ss_pred CCeEEEEECCCCCE
Confidence 77888888887754
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.50 E-value=0.005 Score=44.23 Aligned_cols=105 Identities=10% Similarity=-0.002 Sum_probs=67.1
Q ss_pred cCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecC---------CcceE-EEEEecCCCCEEEEEeCCCeEEEEeCCC
Q psy2113 62 AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH---------KEWVQ-SVRWSPIDPQLFVSASFDNSVKLWDLRS 131 (183)
Q Consensus 62 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~---------~~~v~-~~~~~p~~~~~l~~~~~dg~i~vwd~~~ 131 (183)
.++.++.++.++.+..+|..+++. ....... ...+. .... .+..++.++.++.|..+|.++
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~------~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~t 122 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKE------IWSVSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSD 122 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCE------EEEEECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTT
T ss_pred ECCEEEEEcCCCeEEEEEccCCce------eeeecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCC
Confidence 357788888899999999988775 3333221 12222 2222 344677788899999999999
Q ss_pred CCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 132 PKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 132 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
++. .-............... +..++.++.++.|..+|.++++..
T Consensus 123 G~~-~W~~~~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~ 166 (376)
T 3q7m_A 123 GTV-AWQTKVAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVK 166 (376)
T ss_dssp CCE-EEEEECSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCE-EEEEeCCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEE
Confidence 885 33333222111111122 457888888999999998877643
No 243
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.018 Score=42.55 Aligned_cols=123 Identities=11% Similarity=0.139 Sum_probs=71.9
Q ss_pred eEEEeccCCCeeEEEEccCCe-EEEEeC-CC----eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEE
Q psy2113 45 LITLKGHKEAISAVQWTAVDE-IITSSW-DH----TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 118 (183)
Q Consensus 45 ~~~~~~h~~~v~~~~~~~~~~-l~s~~~-d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~ 118 (183)
+..+.........++|++++. |+.+.. ++ .+.+.+.. +.... ...+. .......++++|+++.++++-
T Consensus 171 v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~~~~----~~~l~-~~~~p~giavdp~~g~lyv~d 244 (430)
T 3tc9_A 171 VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SGFKV----ITELT-KGQNCNGAETHPINGELYFNS 244 (430)
T ss_dssp EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GTSCS----EEEEE-ECSSCCCEEECTTTCCEEEEE
T ss_pred EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cceee----eeeec-cCCCceEEEEeCCCCEEEEEE
Confidence 334434455678999998776 555443 22 23334432 22211 11121 123457788999666677776
Q ss_pred eCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-c-EEEEecCCCcEEEEEecC
Q psy2113 119 SFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R-YIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 119 ~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~~~~~dg~i~iwd~~~ 173 (183)
..++.|..++....................++|+++ + .+++-...+.|..++...
T Consensus 245 ~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 245 WNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 678899999998654211111122235688999965 5 455666778899988764
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.44 E-value=0.00057 Score=49.43 Aligned_cols=98 Identities=11% Similarity=-0.143 Sum_probs=66.3
Q ss_pred EEEEeCCC----eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEe----------CCCeEEEEeCCC
Q psy2113 66 IITSSWDH----TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS----------FDNSVKLWDLRS 131 (183)
Q Consensus 66 l~s~~~d~----~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~----------~dg~i~vwd~~~ 131 (183)
+++-..++ .|.+.|..+.+. ...+.....+ .+.++| ++..+..+. .++.|.+||..+
T Consensus 35 yV~~~~~~~~~d~vsvID~~t~~v------~~~i~vG~~P--~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T 105 (368)
T 1mda_H 35 HITLPAYFAGTTENWVSCAGCGVT------LGHSLGAFLS--LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVT 105 (368)
T ss_dssp EEEECTTTCSSEEEEEEETTTTEE------EEEEEECTTC--EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTT
T ss_pred EEECCccCCccceEEEEECCCCeE------EEEEeCCCCC--ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 45555455 888999988765 4455444444 799999 666666654 368999999999
Q ss_pred CCcceEEeccC-------CCcEEEEEecCC-cEEEEecC--CCcEEE--EEecC
Q psy2113 132 PKVPLFDMLGH-------EDKVMCVNWSDY-RYIMSGGQ--DNSVRV--FKTKH 173 (183)
Q Consensus 132 ~~~~~~~~~~~-------~~~v~~~~~~~~-~~l~~~~~--dg~i~i--wd~~~ 173 (183)
.+. +..+... ......+.++|+ ++++++.. +..+.+ +|+.+
T Consensus 106 ~~v-v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 106 FLP-IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCE-EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 886 5555322 123567889965 67776654 456888 88754
No 245
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.34 E-value=0.0011 Score=47.89 Aligned_cols=121 Identities=7% Similarity=-0.137 Sum_probs=76.7
Q ss_pred cccCccceEEEeccCCCeeEEEEccCCe-EEEEe----------CCCeEEEEEcCCCCCccCceeEEEeecC-------C
Q psy2113 38 LILQKTPLITLKGHKEAISAVQWTAVDE-IITSS----------WDHTLKIWDAELGGMKKGAIVKSTFSSH-------K 99 (183)
Q Consensus 38 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~~----------~d~~v~vwd~~~~~~~~~~~~~~~~~~~-------~ 99 (183)
+..+.+.+.++..-..+ .+.++|+++ ++.+. .++.|.+||..+.+. ...+... .
T Consensus 52 D~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v------v~~I~v~~~~~~~~g 123 (368)
T 1mda_H 52 CAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP------IADIELPDAPRFSVG 123 (368)
T ss_dssp ETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE------EEEEEETTSCSCCBS
T ss_pred ECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE------EEEEECCCccccccC
Confidence 44566777777666666 799999876 55543 468899999998775 3444322 1
Q ss_pred cceEEEEEecCCCCEEEEEeC--CCeEEE--EeCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecC
Q psy2113 100 EWVQSVRWSPIDPQLFVSASF--DNSVKL--WDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 100 ~~v~~~~~~p~~~~~l~~~~~--dg~i~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~ 173 (183)
.....+.++| ++++++.+.. +..+.+ +|..+ +..+..- +. ..+.......+++.+.||.+.+.|+.+
T Consensus 124 ~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~-~~-~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 124 PRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD----DQLTKSA-SC-FHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE----EEEEECS-SC-CCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred CCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh----ceEEECC-Cc-eEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 2356899999 7777777654 457888 99977 2222211 11 111112224566677788888888776
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.29 E-value=0.022 Score=40.00 Aligned_cols=116 Identities=12% Similarity=0.034 Sum_probs=69.4
Q ss_pred CeeEEEEccCCe-EE-EEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC----------C
Q psy2113 54 AISAVQWTAVDE-II-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF----------D 121 (183)
Q Consensus 54 ~v~~~~~~~~~~-l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~----------d 121 (183)
..+.+++++++. |+ +-...+.|.++++....... ...+....+ ...+++.+ +++++++... .
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~----~~~~~~~~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT----AEVLVKIPN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC----EEEEEECSS-EEEEEECT-TSCEEEEEEEETTSSTTSCEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc----cceEEeCCC-CCCeEECC-CCCEEEEecCcccccccCCCc
Confidence 456789998865 44 44667899999987532211 111111223 67889999 7777776654 4
Q ss_pred CeEEEEeCCCCCcceEEeccC----CCcEEEEEecCCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 122 NSVKLWDLRSPKVPLFDMLGH----EDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 122 g~i~vwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+.|..+|.. ++. ...+... -..+..+.+..+.++++...++.|..+++......
T Consensus 260 ~~v~~~d~~-G~~-~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~~~~~ 317 (322)
T 2fp8_A 260 PKGIKFDEF-GNI-LEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDKKGNS 317 (322)
T ss_dssp EEEEEECTT-SCE-EEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC------
T ss_pred cEEEEECCC-CCE-EEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEecccccCc
Confidence 678888874 443 3333322 23466677765566666667889999998755443
No 247
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.27 E-value=0.028 Score=40.85 Aligned_cols=154 Identities=7% Similarity=-0.005 Sum_probs=86.6
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEE-eccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITL-KGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMK 86 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~ 86 (183)
..+++|.+....+...+.....+... .. .......+ .........+++.+ .+. +++-...+.|.+.++.....
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~--~~-~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~- 193 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRA--NL-NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR- 193 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEE--ET-TSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEE--ec-CCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-
Confidence 45677877666655555322211111 11 11112222 22223456778774 455 45556677888888764432
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-CeEEEEeCCCCCcceEEeccCCCcEEEEEecC-C-cEEEEecCC
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIMSGGQD 163 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~d 163 (183)
...+...-.....+++.|.++.++.+-..+ +.|...++..... .......-...+.+++++ + .+.++-...
T Consensus 194 -----~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 194 -----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp -----EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred -----EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 222223335678999999555556655555 7888888875432 223333344578999984 3 445555667
Q ss_pred CcEEEEEecC
Q psy2113 164 NSVRVFKTKH 173 (183)
Q Consensus 164 g~i~iwd~~~ 173 (183)
+.|..+|+..
T Consensus 268 ~~I~~~d~dG 277 (386)
T 3v65_B 268 HVIERANLDG 277 (386)
T ss_dssp TEEEEECTTS
T ss_pred CEEEEEeCCC
Confidence 7898888764
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.26 E-value=0.027 Score=40.32 Aligned_cols=155 Identities=7% Similarity=-0.027 Sum_probs=88.8
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|++....+...++....+.... .........+.........+++.+ ++. +++-...+.|.+.++.....
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~--~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-- 150 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRAN--LNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-- 150 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEE--TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred eEEEEEeccccEEEEEeccCCceEEEe--cCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce--
Confidence 367788876666665553322221111 111111112222233456788875 455 45666678999999875432
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-CeEEEEeCCCCCcceEEeccCCCcEEEEEecC-Cc-EEEEecCCC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YR-YIMSGGQDN 164 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~dg 164 (183)
...+...-.....++++|.++.++.+-..+ +.|...++..... .......-...+.+++++ +. +.++-...+
T Consensus 151 ----~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~ 225 (349)
T 3v64_C 151 ----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHH 225 (349)
T ss_dssp ----EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ----EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCC
Confidence 222223335678999999556566665555 7899888875432 222222334578999984 44 445556677
Q ss_pred cEEEEEecC
Q psy2113 165 SVRVFKTKH 173 (183)
Q Consensus 165 ~i~iwd~~~ 173 (183)
.|..+|+..
T Consensus 226 ~I~~~~~dG 234 (349)
T 3v64_C 226 VIERANLDG 234 (349)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 899998764
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.20 E-value=0.03 Score=43.81 Aligned_cols=55 Identities=9% Similarity=0.125 Sum_probs=37.8
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+|.|..||+.+++. +-.... ..+.....+. .+.+++.++.||.|+.||.++++..
T Consensus 437 ~g~l~A~D~~tG~~-~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 437 SGALLAWDPVKQKA-AWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp EEEEEEEETTTTEE-EEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEeCCCCcE-EEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 47899999999875 333332 2222222233 5578888999999999999887654
No 250
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.17 E-value=0.04 Score=40.60 Aligned_cols=115 Identities=12% Similarity=0.178 Sum_probs=76.8
Q ss_pred CeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccC------ceeEEEeec------CCcceEEEEEecCC--CCEEEEEe
Q psy2113 54 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKG------AIVKSTFSS------HKEWVQSVRWSPID--PQLFVSAS 119 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~------~~~~~~~~~------~~~~v~~~~~~p~~--~~~l~~~~ 119 (183)
.|..+..+|+|.+++-..+..|.|-.+..+..... ......+.- ...+|..+.|+|.. +..|++-.
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt 146 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK 146 (452)
T ss_dssp TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence 67889999999988888899999999873321111 111222222 24679999999953 34788888
Q ss_pred CCCeEEEEeCCCCC-cceEEec---------cCCCcEEEEEecCC-cEEEE--ecCCCcEEEE
Q psy2113 120 FDNSVKLWDLRSPK-VPLFDML---------GHEDKVMCVNWSDY-RYIMS--GGQDNSVRVF 169 (183)
Q Consensus 120 ~dg~i~vwd~~~~~-~~~~~~~---------~~~~~v~~~~~~~~-~~l~~--~~~dg~i~iw 169 (183)
.|+.|++||+.... .|. .+. .....|.+++|..+ -.|.. .+..|.|+-.
T Consensus 147 sD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 147 EDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred cCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999999998632 222 222 22257889999865 34444 5577877654
No 251
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.07 E-value=0.013 Score=43.03 Aligned_cols=115 Identities=18% Similarity=0.188 Sum_probs=69.5
Q ss_pred EEEEEeecCcEEEEEE---eccCCCCccccccc-----CccceEEEec------cCCCeeEEEEccC----CeEEEEeCC
Q psy2113 11 LGVIFMTVGALLTLTN---IEVTSLPSFFQLIL-----QKTPLITLKG------HKEAISAVQWTAV----DEIITSSWD 72 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~~~~------h~~~v~~~~~~~~----~~l~s~~~d 72 (183)
.-+..+|+|.++++.+ +.+..+|....... ..-....+.- ...+|..+.|+|- ..|++-..|
T Consensus 69 ~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 69 FHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred eEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC
Confidence 3478999999999876 55555552211111 1111223322 2467999999975 359999999
Q ss_pred CeEEEEEcCCCCCccCceeEE-----EeecCCcceEEEEEecCCCCEEEE--EeCCCeEEEE
Q psy2113 73 HTLKIWDAELGGMKKGAIVKS-----TFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLW 127 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~p~~~~~l~~--~~~dg~i~vw 127 (183)
+.|++||+......+. .... ........|.+++|.+ ++-.|.. .+..|.|+-.
T Consensus 149 ~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 149 DTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEEEEE
T ss_pred CEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCEEEE
Confidence 9999999986332221 0000 1112235688999998 6654444 4477887644
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.04 E-value=0.05 Score=43.26 Aligned_cols=115 Identities=9% Similarity=0.145 Sum_probs=76.9
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEe----ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd 128 (183)
..|.++...++|.|..|+.++-+..++........ .... ......|.++...+ ++++. .|+.++-|..||
T Consensus 310 ~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~----~~~~~~~~~l~~~~V~~i~~d~-~g~lW-iGt~~~Gl~~~~ 383 (795)
T 4a2l_A 310 RSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKN----IRNIPYKNSLSDNVVSCIVEDK-DKNLW-IGTNDGGLNLYN 383 (795)
T ss_dssp SCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEE----ECCCTTSSSCSCSSEEEEEECT-TSCEE-EEESSSCEEEEC
T ss_pred CcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceE----EcCCCCCCCCCCCeeEEEEECC-CCCEE-EEECCCCeEEEc
Confidence 56889988888999999988889999876543210 0000 01245689998877 66544 466677788999
Q ss_pred CCCCCcceEEec---------cCCCcEEEEEecCCcE-EEEecCCCcEEEEEecCCC
Q psy2113 129 LRSPKVPLFDML---------GHEDKVMCVNWSDYRY-IMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 129 ~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~ 175 (183)
..++.. ..+. -....|.++...++.. |..|+.++-|..||.++++
T Consensus 384 ~~~~~~--~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 384 PITQRF--TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp TTTCCE--EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCCcE--EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 887653 2221 1235788888875544 7778877779999877643
No 253
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.02 E-value=0.019 Score=42.65 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=68.2
Q ss_pred EEEEeCCCeEEEEEcCCCCCccCceeEEEee------c-CCcceEEEEEecCCCCEEEEEeCC------CeEEEEeCCCC
Q psy2113 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFS------S-HKEWVQSVRWSPIDPQLFVSASFD------NSVKLWDLRSP 132 (183)
Q Consensus 66 l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~------~-~~~~v~~~~~~p~~~~~l~~~~~d------g~i~vwd~~~~ 132 (183)
++++-.++.|+++|+.+.... ..+...+. . .....+.+...| ++ +++++..+ |.|.+.|.++.
T Consensus 99 ~v~~l~s~~I~viD~~t~p~~--p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~ 174 (462)
T 2ece_A 99 IVPGLRSSRIYIIDTKPNPRE--PKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSF 174 (462)
T ss_dssp EEEBTTTCCEEEEECCSCTTS--CEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTC
T ss_pred EEccCCCCeEEEEECCCCCCC--ceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCC
Confidence 567778899999998754221 12233331 0 112456777889 67 77776665 78999999988
Q ss_pred CcceEEeccCCC---cEEEEEecCC-cEEEEec-------------------CCCcEEEEEecCC
Q psy2113 133 KVPLFDMLGHED---KVMCVNWSDY-RYIMSGG-------------------QDNSVRVFKTKHQ 174 (183)
Q Consensus 133 ~~~~~~~~~~~~---~v~~~~~~~~-~~l~~~~-------------------~dg~i~iwd~~~~ 174 (183)
+. +........ -...+.|+|+ +.+++.. .+.+|.+||+.++
T Consensus 175 ~v-~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 175 EP-LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp CE-EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred eE-EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 75 555542211 2356778866 6777763 3688999999865
No 254
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.92 E-value=0.11 Score=41.40 Aligned_cols=118 Identities=8% Similarity=0.075 Sum_probs=75.7
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEE-e-ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCC
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKST-F-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 130 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~ 130 (183)
..|.++...+++.|..|+.++-+..||..+............ - ......|.++...+ +++.+..|+.++-+..+|..
T Consensus 357 ~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 357 NVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp SSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETT
T ss_pred CeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCC
Confidence 458888888888888899888899999876542110000000 0 01235688998887 67645566777789999998
Q ss_pred CCCcceEEec-----cCCCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 131 SPKVPLFDML-----GHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 131 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
+++. ..+. .....|.++...++..|..|+. +-|..||..++
T Consensus 436 ~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~ 481 (795)
T 4a2l_A 436 SGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR 481 (795)
T ss_dssp TCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT
T ss_pred CCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC
Confidence 7763 2322 1345788888876555555555 45788887653
No 255
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.91 E-value=0.039 Score=43.29 Aligned_cols=72 Identities=10% Similarity=0.145 Sum_probs=48.9
Q ss_pred EEEEecCCCCEEEEEeCCCe-------------------EEEEeCCCCCcceEEecc--CC-------CcEEEEEec-CC
Q psy2113 104 SVRWSPIDPQLFVSASFDNS-------------------VKLWDLRSPKVPLFDMLG--HE-------DKVMCVNWS-DY 154 (183)
Q Consensus 104 ~~~~~p~~~~~l~~~~~dg~-------------------i~vwd~~~~~~~~~~~~~--~~-------~~v~~~~~~-~~ 154 (183)
.++++| +..+++.+..++. |..+|.++++. +-.++. |. .++...... .+
T Consensus 239 ~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 239 SFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-VWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce-eEeeecCCcccccccCCCCcEEEeeccCC
Confidence 577888 6678888877764 99999999986 443332 21 112111211 23
Q ss_pred ---cEEEEecCCCcEEEEEecCCCCC
Q psy2113 155 ---RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 155 ---~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
..++.++.+|.++++|.++++..
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEe
Confidence 37889999999999999988754
No 256
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.90 E-value=0.019 Score=43.98 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=36.8
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
+|.+..||..+++. +-.... ...+...... .+..++.++.||.|+.||.++++..
T Consensus 443 ~g~l~a~D~~tG~~-~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 443 MGQIRAFDLTTGKA-KWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEECTTTCCE-EEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCE-EEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 57899999998875 333322 2222222222 4567788999999999999988754
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.90 E-value=0.017 Score=45.74 Aligned_cols=112 Identities=10% Similarity=0.040 Sum_probs=67.1
Q ss_pred CeeEEEEc-cCCe-EE-EEeCC----CeEEEEEcCCC-CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC----
Q psy2113 54 AISAVQWT-AVDE-II-TSSWD----HTLKIWDAELG-GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---- 121 (183)
Q Consensus 54 ~v~~~~~~-~~~~-l~-s~~~d----~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---- 121 (183)
.+....|+ |+|. ++ +...+ ..|+++|+.++ +.... .+. .....++|+| +++.|+....|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~~~---~~~~~~~Wsp-Dg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----KVS---GTNGEIVWGP-DHTSLFYVTKDETLR 245 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----CEE---EECSCCEECS-STTEEEEEEECTTCC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----ccc---CceeeEEEec-CCCEEEEEEECCCCC
Confidence 57789999 9987 33 22222 35999999887 52111 111 1134678999 66655555544
Q ss_pred -CeEEEEeCCCCCcc-eEEec-cCCCcEEEEEecCC-cEEEEec---CCCcEEEEEecCC
Q psy2113 122 -NSVKLWDLRSPKVP-LFDML-GHEDKVMCVNWSDY-RYIMSGG---QDNSVRVFKTKHQ 174 (183)
Q Consensus 122 -g~i~vwd~~~~~~~-~~~~~-~~~~~v~~~~~~~~-~~l~~~~---~dg~i~iwd~~~~ 174 (183)
..|+++++.++... ...+. ........+.|+++ ++|+..+ ....|.++|+.++
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 36888888775421 22222 22345677889966 6665443 2345888888765
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.88 E-value=0.072 Score=38.66 Aligned_cols=117 Identities=8% Similarity=0.018 Sum_probs=74.0
Q ss_pred CCCeeEEEEccC-CeE-EEEeCC-CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy2113 52 KEAISAVQWTAV-DEI-ITSSWD-HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128 (183)
Q Consensus 52 ~~~v~~~~~~~~-~~l-~s~~~d-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd 128 (183)
......+++.|. +.| ++-... +.|...++..... .......-.....++++|.++.++++-...+.|..+|
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~------~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d 274 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 274 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc------EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe
Confidence 355688999864 554 444444 7888888765432 1122223345789999985565666666678999999
Q ss_pred CCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 129 LRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+..... .............+++..+..+++-...+.|..+|..+++
T Consensus 275 ~dG~~~-~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 275 LDGSHR-KAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGK 320 (386)
T ss_dssp TTSCSC-EEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCee-EEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCc
Confidence 875432 2233333445677777665677777778888888854443
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.81 E-value=0.066 Score=37.32 Aligned_cols=122 Identities=6% Similarity=-0.028 Sum_probs=71.7
Q ss_pred ccceEEEeccCCCeeEEEEccCCeEEEE-eCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC
Q psy2113 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 120 (183)
Q Consensus 42 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~ 120 (183)
.+.+..+... .....++|.+++.|+.+ ..++.|..||..... .... .....+..+++.+ +++++++...
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-------~~~~-~~~~~p~gia~~~-dG~l~vad~~ 91 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-------QIHA-TVEGKVSGLAFTS-NGDLVATGWN 91 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-------EEEE-ECSSEEEEEEECT-TSCEEEEEEC
T ss_pred ceEeEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-------EEEE-eCCCCceeEEEcC-CCcEEEEecc
Confidence 3444455432 46789999988775544 478899999876422 1122 2345688999999 7776666543
Q ss_pred C--CeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEEEEecCCCcEEEEEecC
Q psy2113 121 D--NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 121 d--g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~ 173 (183)
. ..|..+|..+++...............++..++ ..+++-..++.|..+|...
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT
T ss_pred CCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC
Confidence 2 257777877765311111112223344554444 4445555688888888754
No 260
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.80 E-value=0.087 Score=38.45 Aligned_cols=158 Identities=8% Similarity=-0.056 Sum_probs=88.4
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccC--ccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCC
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQ--KTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~ 85 (183)
..+++|++....+...+.....+.....+... ......+.........+++.+ .+. +++-...+.|.+.++.....
T Consensus 114 ~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~ 193 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 193 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE
T ss_pred ceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce
Confidence 45778887666666655332211111111100 111222222344567888875 455 45556678899988875442
Q ss_pred ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC-CCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcEE-EEecC
Q psy2113 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYI-MSGGQ 162 (183)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~~~~~ 162 (183)
...+...-.....|++.|..+.++.+-.. .+.|...++..... .......-...+.|++++ +..| ++-..
T Consensus 194 ------~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~~~~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 194 ------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp ------EEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred ------EEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEEEECCCCceEEEEEEeCCCEEEEEECC
Confidence 22233334457899999955555555433 36888888865442 233333335678999984 4444 44455
Q ss_pred CCcEEEEEecCC
Q psy2113 163 DNSVRVFKTKHQ 174 (183)
Q Consensus 163 dg~i~iwd~~~~ 174 (183)
.+.|..+|+...
T Consensus 267 ~~~I~~~d~dG~ 278 (400)
T 3p5b_L 267 LHSISSIDVNGG 278 (400)
T ss_dssp TTEEEEEETTSC
T ss_pred CCEEEEEeCCCC
Confidence 678888887643
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.78 E-value=0.15 Score=40.85 Aligned_cols=158 Identities=8% Similarity=-0.050 Sum_probs=86.7
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCccccccc--CccceEEEeccCCCeeEEEEccC-Ce-EEEEeCCCeEEEEEcCCCCC
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLIL--QKTPLITLKGHKEAISAVQWTAV-DE-IITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~~~~-~~-l~s~~~d~~v~vwd~~~~~~ 85 (183)
..+++|.+....+...+.....+.....+.. .......+.........|++.+. +. +++-...+.|.+.++.....
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 505 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE
Confidence 3567777765555555432111111110100 01122223323445678888744 34 55666788999999875432
Q ss_pred ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-CeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcEE-EEecC
Q psy2113 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYI-MSGGQ 162 (183)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~~~~~ 162 (183)
...+...-.....|++.|..+.++.+-..+ +.|.+.++..... .......-...+.|++.+ +..| ++-..
T Consensus 506 ------~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 506 ------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp ------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred ------EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 222223344588999999445555554333 7888888865442 233333335678888883 3444 44455
Q ss_pred CCcEEEEEecCC
Q psy2113 163 DNSVRVFKTKHQ 174 (183)
Q Consensus 163 dg~i~iwd~~~~ 174 (183)
.+.|...++...
T Consensus 579 ~~~I~~~d~dG~ 590 (791)
T 3m0c_C 579 LHSISSIDVNGG 590 (791)
T ss_dssp TTEEEEEETTSC
T ss_pred CCcEEEEecCCC
Confidence 667888887543
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.77 E-value=0.021 Score=43.88 Aligned_cols=56 Identities=18% Similarity=0.174 Sum_probs=37.1
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEEEe-cCCcEEEEecCCCcEEEEEecCCCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
+|.|.-||+.+++. +-..... .++..-.. ..+.+++.++.||.++.||.++++..-
T Consensus 465 ~G~l~A~D~~tG~~-~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 465 VGSLRAMDPVSGKV-VWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW 521 (582)
T ss_dssp SEEEEEECTTTCCE-EEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cceEEEEECCCCCE-EEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence 57899999999875 3333222 12211111 245778889999999999999887543
No 263
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.69 E-value=0.067 Score=41.65 Aligned_cols=112 Identities=17% Similarity=0.197 Sum_probs=66.0
Q ss_pred EEEEcc-CCe-EEEEeCCC-----------eEEEEEcCCCCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeC-C
Q psy2113 57 AVQWTA-VDE-IITSSWDH-----------TLKIWDAELGGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASF-D 121 (183)
Q Consensus 57 ~~~~~~-~~~-l~s~~~d~-----------~v~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~-d 121 (183)
..++.+ +++ ++.|+.+. .+.+||..+++... ...+. .+.....++++.+ ++.+++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~----~~~~~~~~~~~~~~~~~~~-~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD----RTVTVTKHDMFCPGISMDG-NGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC----CEEEECSCCCSSCEEEECT-TSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe----CcccCCCCCCccccccCCC-CCCEEEeCCCCC
Confidence 556665 677 55665432 58899998776532 12221 2333344566777 7888888884 4
Q ss_pred CeEEEEeCCCCCcc-eEEeccCCCcEEEEEec-CCcEEEEec-CC-----CcEEEEEecCC
Q psy2113 122 NSVKLWDLRSPKVP-LFDMLGHEDKVMCVNWS-DYRYIMSGG-QD-----NSVRVFKTKHQ 174 (183)
Q Consensus 122 g~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~~-~~~~l~~~~-~d-----g~i~iwd~~~~ 174 (183)
..+.+||..+.+-. +..+...... .++... ++..++.|+ .+ ..+.+||+.+.
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred CceEEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 58999999876420 1111111122 233444 667777777 44 46899998764
No 264
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.67 E-value=0.023 Score=44.56 Aligned_cols=92 Identities=12% Similarity=0.118 Sum_probs=59.1
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEec-cCCCcEEEEEe
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNW 151 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~ 151 (183)
+.|..||+.+++. ..... +..++....+.. .+.+++.++.||.+++||.++++. +..+. ++.....-+.|
T Consensus 457 g~l~A~D~~tG~~------~W~~~-~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~-lw~~~~~~~~~~~p~~y 527 (677)
T 1kb0_A 457 GRLLAWDPVAQKA------AWSVE-HVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEK-LWEAPTGTGVVAAPSTY 527 (677)
T ss_dssp EEEEEEETTTTEE------EEEEE-ESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEEE
T ss_pred cEEEEEeCCCCcE------EeecC-CCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCce-eeeeeCCCCcccCCEEE
Confidence 7899999988764 33433 333344444555 566888889999999999999987 55544 33333344556
Q ss_pred c-CC-cEEEEecC----------------CCcEEEEEecC
Q psy2113 152 S-DY-RYIMSGGQ----------------DNSVRVFKTKH 173 (183)
Q Consensus 152 ~-~~-~~l~~~~~----------------dg~i~iwd~~~ 173 (183)
. ++ .+++..+. .+.+..|.+..
T Consensus 528 ~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 528 MVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 4 55 44444222 36788888773
No 265
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.59 E-value=0.0087 Score=40.02 Aligned_cols=110 Identities=5% Similarity=-0.021 Sum_probs=64.9
Q ss_pred CCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEee--cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 52 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 52 ~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
-..+..++|+|++.|.+. .++.++-.+..+.....=......+- +... ..++-|.| ++.+.++ .||.|+-++.
T Consensus 40 w~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~-~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 40 WSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDP-NGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp CTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECT-TSCEEEE--ETTEEEEESC
T ss_pred cccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECC-CCCEEEe--CCCEEEEeCC
Confidence 347889999999998777 77876665543322110000001110 1111 47888999 7877766 5799988877
Q ss_pred CCCCcc-----eEEe-ccCCCcEEEEEecCCcEEEEecCCCcEE
Q psy2113 130 RSPKVP-----LFDM-LGHEDKVMCVNWSDYRYIMSGGQDNSVR 167 (183)
Q Consensus 130 ~~~~~~-----~~~~-~~~~~~v~~~~~~~~~~l~~~~~dg~i~ 167 (183)
.+...- ...+ ..-=..+..|.+.|+..|.+.. |+.+.
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEE
Confidence 543220 0111 1111467888999887777777 88854
No 266
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.50 E-value=0.19 Score=38.66 Aligned_cols=73 Identities=11% Similarity=0.060 Sum_probs=50.3
Q ss_pred cceEEEEEecCCCCE-EEEEeCCCeEEEEeCCCCCc----------ceEEeccCCCcEEEEEecCCcEE-EEecCCCcEE
Q psy2113 100 EWVQSVRWSPIDPQL-FVSASFDNSVKLWDLRSPKV----------PLFDMLGHEDKVMCVNWSDYRYI-MSGGQDNSVR 167 (183)
Q Consensus 100 ~~v~~~~~~p~~~~~-l~~~~~dg~i~vwd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~i~ 167 (183)
....++.++| ++.+ ++++..+..|.++|+.+.+. .+.....-......++|+++..+ ++.-.|++|.
T Consensus 277 ~~PhGv~~sP-DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 277 NNPHGCNMAP-DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp SSCCCEEECT-TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCceEEEEcC-CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 3567899999 6664 55555788999999985421 12222233356789999965444 4566799999
Q ss_pred EEEecC
Q psy2113 168 VFKTKH 173 (183)
Q Consensus 168 iwd~~~ 173 (183)
+||+.+
T Consensus 356 kwdi~~ 361 (595)
T 1fwx_A 356 KWNIED 361 (595)
T ss_dssp EEEHHH
T ss_pred EEEhhH
Confidence 999876
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.50 E-value=0.12 Score=36.32 Aligned_cols=157 Identities=8% Similarity=-0.055 Sum_probs=87.6
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCccccccc-C-ccceEEEeccCCCeeEEEEcc-CCeE-EEEeCCCeEEEEEcCCCCC
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLIL-Q-KTPLITLKGHKEAISAVQWTA-VDEI-ITSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~h~~~v~~~~~~~-~~~l-~s~~~d~~v~vwd~~~~~~ 85 (183)
..+++|++.+..+...+.....+..+..... . ......+........++++.+ ++.| ++-...+.|.+.++.....
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~ 111 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 111 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce
Confidence 3578888877666665533222111111110 0 111112222234557888874 4554 5556788999999865332
Q ss_pred ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-CeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcE-EEEecC
Q psy2113 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRY-IMSGGQ 162 (183)
Q Consensus 86 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~~~~~ 162 (183)
.............++++|.++.++.+.... +.|...++..... .......-...+.+++++ +.. .++-..
T Consensus 112 ------~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 112 ------KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp ------EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred ------EEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 112222335678999998555555554443 7888888864332 222222335678999984 444 455556
Q ss_pred CCcEEEEEecC
Q psy2113 163 DNSVRVFKTKH 173 (183)
Q Consensus 163 dg~i~iwd~~~ 173 (183)
.+.|..+|+..
T Consensus 185 ~~~I~~~d~dg 195 (316)
T 1ijq_A 185 LHSISSIDVNG 195 (316)
T ss_dssp TTEEEEEETTS
T ss_pred CCeEEEEecCC
Confidence 77899999864
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.49 E-value=0.13 Score=36.68 Aligned_cols=117 Identities=8% Similarity=0.009 Sum_probs=73.2
Q ss_pred cCCCeeEEEEcc-CCeE-EEEeCC-CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEE
Q psy2113 51 HKEAISAVQWTA-VDEI-ITSSWD-HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 127 (183)
Q Consensus 51 h~~~v~~~~~~~-~~~l-~s~~~d-~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vw 127 (183)
.......+++.| ++.| ++-... +.|...++..... .......-.....++++|.++.+.++-...+.|..+
T Consensus 157 ~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~------~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 157 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp TCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC------EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc------EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 334568899987 4554 444444 7888888765432 111122234578999998555566666667899999
Q ss_pred eCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 128 DLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 128 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
|+..... .............+++..+..+++-...+.|..+|..++
T Consensus 231 ~~dG~~~-~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 231 NLDGSHR-KAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp ETTSCSC-EEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred eCCCCce-EEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 9875432 223333344567777765566677777788888875444
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.44 E-value=0.17 Score=37.38 Aligned_cols=152 Identities=6% Similarity=0.085 Sum_probs=81.4
Q ss_pred eEEEEEeec--CcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCC----e-EEEEEcCC
Q psy2113 10 TLGVIFMTV--GALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDH----T-LKIWDAEL 82 (183)
Q Consensus 10 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~----~-v~vwd~~~ 82 (183)
..+++++|+ ...+.+.+.. ..+..+ +. ....+..+.........+++.+++.|+.+...+ . +...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~i--d~-~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~- 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHV--DF-VNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA- 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEE--ET-TTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEE--EC-CCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-
Confidence 357888884 3334444332 111111 11 122334444445567899999887765554321 2 2223322
Q ss_pred CCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe--ccCCCcEEEEEecCC-c-EEE
Q psy2113 83 GGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM--LGHEDKVMCVNWSDY-R-YIM 158 (183)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~-~-~l~ 158 (183)
..... ...+. .......++++|.++.++++-..++.|+.+|..++.. ...+ .+.......++|+++ + +.+
T Consensus 216 ~~~~~----~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~-~~~~~~~~~~~~~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 216 SGFTE----RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL-TEEEVMMDTKGSNFHIVWHPTGDWAYI 289 (433)
T ss_dssp GTTCC----EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE-EEEEEECSCCSSCEEEEECTTSSEEEE
T ss_pred CCeec----ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE-EEEEeccCCCCCcccEEEeCCCCEEEE
Confidence 11110 01111 2234567888885566666666778999999986653 1122 112223356999965 5 555
Q ss_pred EecCCCcEEEEEec
Q psy2113 159 SGGQDNSVRVFKTK 172 (183)
Q Consensus 159 ~~~~dg~i~iwd~~ 172 (183)
+-...+.|+.+++.
T Consensus 290 ad~~~~~I~~~~~d 303 (433)
T 4hw6_A 290 IYNGKHCIYRVDYN 303 (433)
T ss_dssp EETTTTEEEEEEBC
T ss_pred EeCCCCEEEEEeCC
Confidence 66667889998865
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.37 E-value=0.23 Score=39.46 Aligned_cols=112 Identities=12% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEee---cCCcceEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy2113 52 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128 (183)
Q Consensus 52 ~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd 128 (183)
...|.++...+++.|..|+.++-+..+|..++.. ..+. .....|.++...+ ++.+.+ |+. +-+..+|
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-------~~~~~~~~~~~~v~~i~~d~-~g~lwi-gt~-~Gl~~~~ 475 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKF-------QIIELEKNELLDVRVFYEDK-NKKIWI-GTH-AGVFVID 475 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEE-------EECCSTTTCCCCEEEEEECT-TSEEEE-EET-TEEEEEE
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcE-------EEeccCCCCCCeEEEEEECC-CCCEEE-EEC-CceEEEe
Confidence 3568888877778888888877888888765442 1221 1345788888877 565544 444 5688899
Q ss_pred CCCCCcceEEeccC-----CCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 129 LRSPKVPLFDMLGH-----EDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 129 ~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
..+.+. ....... ...|.++...++..|..|+.++-|..||.++.
T Consensus 476 ~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 476 LASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ 525 (781)
T ss_dssp SSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC
T ss_pred CCCCeE-EecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC
Confidence 887654 2222111 35788888876656666666445777776543
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.32 E-value=0.17 Score=36.02 Aligned_cols=113 Identities=6% Similarity=0.058 Sum_probs=73.4
Q ss_pred eeEEEE---ccCCeEEEEeC--------------CCeEEEEEcC---CCCCccCceeEEEeec-----------CCcceE
Q psy2113 55 ISAVQW---TAVDEIITSSW--------------DHTLKIWDAE---LGGMKKGAIVKSTFSS-----------HKEWVQ 103 (183)
Q Consensus 55 v~~~~~---~~~~~l~s~~~--------------d~~v~vwd~~---~~~~~~~~~~~~~~~~-----------~~~~v~ 103 (183)
+.+|.| .+.++|+.... +..+..+|+. +++... ...+.. ......
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~----~~dL~~~~~~~~~~~g~~~~~~n 140 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVW----SVNFEKVQDEFEKKAGKRPFGVV 140 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSE----EEESHHHHHHHHHHHSSCCEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEE----EecCccccccccccccccccCCc
Confidence 578999 57787554332 6789999998 554321 111211 112478
Q ss_pred EEEEecCCCCEEEEEeCC-CeEEEEeCCCCCcceEEec-c-----CCCcEEEEEecCC-cEEEEecCCCcEEEEEecCC
Q psy2113 104 SVRWSPIDPQLFVSASFD-NSVKLWDLRSPKVPLFDML-G-----HEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 104 ~~~~~p~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~-~-----~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 174 (183)
.++..+ +++..++++.- +.|...+..... ...+. . .....+.|+++|+ ..|++...+|.|..+|++..
T Consensus 141 DvavD~-~GnaYVt~s~~~~~I~rV~pdG~~--~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 141 QSAQDR-DGNSYVAFALGMPAIARVSADGKT--VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEECT-TSCEEEEEEESSCEEEEECTTSCC--EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eeEECC-CCCEEEeCCCCCCeEEEEeCCCCE--EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 999999 88999988888 887777776442 22211 1 1123568999965 56666655999999998843
No 272
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.14 E-value=0.024 Score=44.57 Aligned_cols=112 Identities=10% Similarity=-0.005 Sum_probs=65.7
Q ss_pred eeEEEEc-cCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-CeEEEEeCCC
Q psy2113 55 ISAVQWT-AVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDLRS 131 (183)
Q Consensus 55 v~~~~~~-~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-g~i~vwd~~~ 131 (183)
...|++. ..+. +++-...+.|.+.++..... ...+.........+++.|..+.++++-... +.|.+.++..
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~------~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR------KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE------EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCce------EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 4567776 3444 45555678899998765432 111222224467888998555555554333 6788877754
Q ss_pred CCcceEEeccCCCcEEEEEecCC--cEEEEecCCCcEEEEEecC
Q psy2113 132 PKVPLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 132 ~~~~~~~~~~~~~~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~ 173 (183)
... .......-...+.|+|++. .++++-...+.|..+|+..
T Consensus 529 ~~~-~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 529 VDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCC-CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCe-eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 332 2222222345678899853 4555666677899998864
No 273
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.05 E-value=0.15 Score=39.34 Aligned_cols=56 Identities=7% Similarity=-0.015 Sum_probs=36.1
Q ss_pred CCeEEEEeCCCCCcceEEeccCCCcEEEE-EecCCcEEEEecCCCcEEEEEecCCCCCC
Q psy2113 121 DNSVKLWDLRSPKVPLFDMLGHEDKVMCV-NWSDYRYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 121 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
+|.+.-||+.+++. +-... +..+...- ....+..++.++.||.|+.||.++++..-
T Consensus 452 ~G~l~A~D~~tG~~-~W~~~-~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 452 LGQIKAYNAITGDY-KWEKM-ERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLW 508 (599)
T ss_dssp CEEEEEECTTTCCE-EEEEE-ESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cCeEEEEECCCCCE-EeEec-CCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEE
Confidence 47888999998874 33322 11122111 11245677789999999999999887543
No 274
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.01 E-value=0.43 Score=37.89 Aligned_cols=115 Identities=8% Similarity=0.004 Sum_probs=70.4
Q ss_pred CCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEee---cCCcceEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy2113 52 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128 (183)
Q Consensus 52 ~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd 128 (183)
...|.++...+++.|..|+. +-+..+|..+..... ..... .....|.++...+ ++.+.+....+| +..+|
T Consensus 449 ~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~----~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIH----HYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp CCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCE----EECTTTSSCSCSCEEEEEECT-TCCEEEEESSSC-EEEEC
T ss_pred CCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEe----cccCcccccccceeEEEEEcC-CCCEEEEEcCCC-EEEEe
Confidence 35688888777888777777 568889887654311 10000 1135688998887 676655443344 67788
Q ss_pred CCCCCcceEEecc----CCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 129 LRSPKVPLFDMLG----HEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 129 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
..+.+. ..+.. ....|.++...++..|..++.+|.|..||.++.+
T Consensus 522 ~~~~~~--~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 522 PDMQLV--RKFNQYEGFCSNTINQIYRSSKGQMWLATGEGLVCFPSARNFD 570 (781)
T ss_dssp TTCCEE--EEECTTTTCSCSCEEEEEECTTSCEEEEETTEEEEESCTTTCC
T ss_pred CCCCeE--EEccCCCCCCCCeeEEEEECCCCCEEEEECCCceEEECCCCCc
Confidence 876542 22221 2346888888765555555556665778876543
No 275
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.86 E-value=0.26 Score=35.25 Aligned_cols=103 Identities=9% Similarity=0.086 Sum_probs=59.4
Q ss_pred CCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEe---ecCCcceEEEEEecC---CCCEEEEEeCC----
Q psy2113 52 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF---SSHKEWVQSVRWSPI---DPQLFVSASFD---- 121 (183)
Q Consensus 52 ~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~---~~~~l~~~~~d---- 121 (183)
-..-..++|.|++.++.+..++.|++++ .+... ....+ .........++++|+ ++.+.++-..+
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~----~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR--EGRLS----TYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE--TTEEE----EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE--CCCcc----EeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3455799999999988888889999998 22211 11111 112356889999993 24455554432
Q ss_pred -CeEEEEeCCCCC-----cceEEec---cCCCcEEEEEecCCcEEEEe
Q psy2113 122 -NSVKLWDLRSPK-----VPLFDML---GHEDKVMCVNWSDYRYIMSG 160 (183)
Q Consensus 122 -g~i~vwd~~~~~-----~~~~~~~---~~~~~v~~~~~~~~~~l~~~ 160 (183)
..|..++..... .....+. ........++|.++..|+.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~ 151 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT 151 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE
Confidence 577788776432 1111122 11123468899976444433
No 276
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.85 E-value=0.28 Score=34.32 Aligned_cols=117 Identities=7% Similarity=0.054 Sum_probs=69.9
Q ss_pred EeccCCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCceeEEEeec--------------------CCcceEEEE
Q psy2113 48 LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS--------------------HKEWVQSVR 106 (183)
Q Consensus 48 ~~~h~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~--------------------~~~~v~~~~ 106 (183)
+.+.-....+++|.+++. +.++..++.|..||...... ..+.. ....+..++
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-------VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS 86 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE-------EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-------EEEecccccccccccccccchhccccCCCCceEE
Confidence 334334456888988877 88888899999998765432 11110 113578899
Q ss_pred EecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc-----CCCcEEEEEecC-C-cEEEEecC-----------------
Q psy2113 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG-----HEDKVMCVNWSD-Y-RYIMSGGQ----------------- 162 (183)
Q Consensus 107 ~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~-~-~~l~~~~~----------------- 162 (183)
+.+.+++ |..+...+.+..+|..++.. ..+.. .......+++.+ + ...++-..
T Consensus 87 ~~~~~g~-l~v~d~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~ 163 (322)
T 2fp8_A 87 YNLQNNQ-LYIVDCYYHLSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDK 163 (322)
T ss_dssp EETTTTE-EEEEETTTEEEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCC
T ss_pred EcCCCCc-EEEEECCCCEEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCC
Confidence 9873444 44444455688888775432 12211 113468888887 6 44444322
Q ss_pred CCcEEEEEecCC
Q psy2113 163 DNSVRVFKTKHQ 174 (183)
Q Consensus 163 dg~i~iwd~~~~ 174 (183)
++.|..||..++
T Consensus 164 ~g~v~~~d~~~~ 175 (322)
T 2fp8_A 164 TGRLIKYDPSTK 175 (322)
T ss_dssp CEEEEEEETTTT
T ss_pred CceEEEEeCCCC
Confidence 366888886544
No 277
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.79 E-value=0.24 Score=38.61 Aligned_cols=70 Identities=9% Similarity=0.046 Sum_probs=39.3
Q ss_pred EEEecCCCCEEEEEeCCC-----------eEEEEeCCCCCcceEEe--ccCCCcE-EEEEec-CCcEEEEecCC------
Q psy2113 105 VRWSPIDPQLFVSASFDN-----------SVKLWDLRSPKVPLFDM--LGHEDKV-MCVNWS-DYRYIMSGGQD------ 163 (183)
Q Consensus 105 ~~~~p~~~~~l~~~~~dg-----------~i~vwd~~~~~~~~~~~--~~~~~~v-~~~~~~-~~~~l~~~~~d------ 163 (183)
+.+...++.+++.|+.++ .+.+||..+..- .... ....... .+.... ++..++.|+.+
T Consensus 404 v~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W-~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~ 482 (656)
T 1k3i_A 404 VMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN-TVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFE 482 (656)
T ss_dssp EEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE-EEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTC
T ss_pred EeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe-eEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcC
Confidence 333333567777777532 678888877653 2111 1112222 233344 55788888764
Q ss_pred -----CcEEEEEecCCC
Q psy2113 164 -----NSVRVFKTKHQP 175 (183)
Q Consensus 164 -----g~i~iwd~~~~~ 175 (183)
..+.+||+.+.+
T Consensus 483 ~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 483 DSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CCSBCCCCEEEEGGGTE
T ss_pred CCCcccceEEEcCCCCc
Confidence 458999987643
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.78 E-value=0.26 Score=33.64 Aligned_cols=118 Identities=15% Similarity=0.216 Sum_probs=75.0
Q ss_pred EEeccCCCeeEEEEccC-CeEE-EEeCCCeEEEEEcCCCCCccCceeEEEee-cCCcceEEEEEecCCCCEEEEEeCCCe
Q psy2113 47 TLKGHKEAISAVQWTAV-DEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNS 123 (183)
Q Consensus 47 ~~~~h~~~v~~~~~~~~-~~l~-s~~~d~~v~vwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~~~~~dg~ 123 (183)
.+.+-.+.+..++|+|+ +.|+ +...++.|...|.. ++. ...+. .-....-.|++.+ ++.++++.-.++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v------~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~ 92 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL------IRTIPLDFVKDLETIEYIG-DNQFVISDERDYA 92 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE------EEEEECSSCSSEEEEEECS-TTEEEEEETTTTE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE------EEEEecCCCCChHHeEEeC-CCEEEEEECCCCc
Confidence 45566678999999975 5554 56778888888886 443 22332 2224577888888 6767676656788
Q ss_pred EEEEeCCCCCc--ceEEec------cCCCcEEEEEecCC-cEEEEecCCCcEEEEEec
Q psy2113 124 VKLWDLRSPKV--PLFDML------GHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 124 i~vwd~~~~~~--~~~~~~------~~~~~v~~~~~~~~-~~l~~~~~dg~i~iwd~~ 172 (183)
+.++++..... ...... ..+.....++|++. +.|+++.......+|.+.
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 99998865442 011111 12334589999965 566666665555666554
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.74 E-value=0.31 Score=34.17 Aligned_cols=117 Identities=7% Similarity=-0.031 Sum_probs=72.8
Q ss_pred cCCCeeEEEEcc-CCeEE-EEeCC-CeEEEEEcCCCCCccCceeEEEe-ecCCcceEEEEEecCCCCEEEEEeCCCeEEE
Q psy2113 51 HKEAISAVQWTA-VDEII-TSSWD-HTLKIWDAELGGMKKGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKL 126 (183)
Q Consensus 51 h~~~v~~~~~~~-~~~l~-s~~~d-~~v~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~v 126 (183)
.......+++.| ++.|+ +.... +.|...++.... ...+ ...-.....++++|+++.++++-...+.|..
T Consensus 118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~ 190 (316)
T 1ijq_A 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 190 (316)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEE
Confidence 335668899987 45544 43333 688888876433 1122 2233457899999845555565556779999
Q ss_pred EeCCCCCcceEEec--cCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 127 WDLRSPKVPLFDML--GHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 127 wd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+|+..... ..... ........+++..+..+++-...+.|..+|..+++
T Consensus 191 ~d~dg~~~-~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 191 IDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGS 240 (316)
T ss_dssp EETTSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred EecCCCce-EEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCc
Confidence 99975432 21221 12334577777666666777778889888876554
No 280
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.73 E-value=0.073 Score=41.90 Aligned_cols=114 Identities=8% Similarity=-0.015 Sum_probs=65.8
Q ss_pred CCeeEEEEccC-CeEEEEe-C-CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 53 EAISAVQWTAV-DEIITSS-W-DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 53 ~~v~~~~~~~~-~~l~s~~-~-d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
.....|++.|. +.|+... . .+.|.+.++..... .......-.....|+++|.++.++++-...+.|.++|+
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~------~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC------CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe------eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 34567788764 4443332 2 26777777654322 11111122346789999855667676667789999999
Q ss_pred CCCCcceEEec--cCCCcEEEEEecCCcEEEEecCCCcEEEEEecC
Q psy2113 130 RSPKVPLFDML--GHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 130 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~ 173 (183)
..... ..... ........|++..+.++++....+.|..+|..+
T Consensus 570 dG~~~-~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~ 614 (699)
T 1n7d_A 570 NGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLT 614 (699)
T ss_dssp SSSCC-EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTT
T ss_pred CCCce-EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccC
Confidence 75432 22221 112233455555556666777778888888654
No 281
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.73 E-value=0.26 Score=33.08 Aligned_cols=149 Identities=8% Similarity=-0.044 Sum_probs=74.5
Q ss_pred EEEEEeecCcEEEEEEeccCCCCcccccccCc-cceEEEe--ccCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCcc
Q psy2113 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQK-TPLITLK--GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..++|+|+|.+.++.+=++|..+......... ..-..+- +-. ....+.|.+++.|.++ .||.|+-++..+....
T Consensus 44 ~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~- 120 (236)
T 1tl2_A 44 KFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTD- 120 (236)
T ss_dssp SEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETTEEEEESCCCSTTC-
T ss_pred eeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe-CCCEEEEeCCCcCCCC-
Confidence 37899999999888332233222100000000 0111110 111 2467888899987777 6699887775332211
Q ss_pred CceeE-EEe-ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc-----ceEEe-ccCCCcEEEEEecCCcEEEE
Q psy2113 88 GAIVK-STF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV-----PLFDM-LGHEDKVMCVNWSDYRYIMS 159 (183)
Q Consensus 88 ~~~~~-~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~-----~~~~~-~~~~~~v~~~~~~~~~~l~~ 159 (183)
...-. ..+ ..-=..+..|.+.| ++.+.+.. |+.++-+...+... ....+ ...-..-..+.|.++..|..
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECT-TSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred ceeccccEeccCCCCceEEEEECC-CceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 10000 011 11114579999999 88666655 78765443332221 01111 12223345566887766655
Q ss_pred ecCCCcE
Q psy2113 160 GGQDNSV 166 (183)
Q Consensus 160 ~~~dg~i 166 (183)
+. +|.+
T Consensus 198 v~-~g~~ 203 (236)
T 1tl2_A 198 VQ-GGKF 203 (236)
T ss_dssp EE-TTEE
T ss_pred Ee-CCeE
Confidence 55 7744
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.69 E-value=0.4 Score=35.35 Aligned_cols=112 Identities=11% Similarity=0.108 Sum_probs=65.6
Q ss_pred CeeEEEEcc--CCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCC-EEEEEeCCC----eEEE
Q psy2113 54 AISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDN----SVKL 126 (183)
Q Consensus 54 ~v~~~~~~~--~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~~~~~dg----~i~v 126 (183)
....|+++| ++.|..+...+.|+.+|+..... ..+.........+++++ +++ ++++...++ .+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-------~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-------STVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-------EEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-------EEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEE
Confidence 346788886 36666665558888899876542 23333445688999999 777 444443222 3444
Q ss_pred EeCCCCCcceEEeccCCCcEEEEEecC-C-cEEEEecCCCcEEEEEecCC
Q psy2113 127 WDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 127 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~ 174 (183)
.+..........+. .......++++| + ..+++-..++.|..++....
T Consensus 210 ~~~~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 210 LTRESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp EEGGGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred EeCCCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 44332211112222 123456778887 4 55556666788999987654
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.67 E-value=0.34 Score=34.12 Aligned_cols=119 Identities=7% Similarity=-0.036 Sum_probs=75.5
Q ss_pred cCCCeeEEEEccC-CeEEEEe--CCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEE
Q psy2113 51 HKEAISAVQWTAV-DEIITSS--WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 127 (183)
Q Consensus 51 h~~~v~~~~~~~~-~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vw 127 (183)
.......+++.|. +.|+... ..+.|...++..... .......-.....++++|+++.+..+=...+.|..+
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~------~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~ 193 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR------FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKS 193 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe------EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEE
Confidence 3445678898864 6654443 357888888764332 111222234568999999555555655667899999
Q ss_pred eCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 128 DLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 128 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|+..... .............+++..+..+.+-...+.|..+|..+++.
T Consensus 194 d~dG~~~-~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 194 NLDGTNR-QAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp ETTSCSC-EEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred cCCCCce-EEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCc
Confidence 9875432 22233334556777776666777777788899998866553
No 284
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.64 E-value=0.029 Score=43.04 Aligned_cols=107 Identities=7% Similarity=0.014 Sum_probs=65.9
Q ss_pred CeeEEEEccCCe--EEEEeCCCeEEEEEcCCCC------CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEE
Q psy2113 54 AISAVQWTAVDE--IITSSWDHTLKIWDAELGG------MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125 (183)
Q Consensus 54 ~v~~~~~~~~~~--l~s~~~d~~v~vwd~~~~~------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~ 125 (183)
...++.++|+|+ ++++..+.+|.++|+.+.+ ............ -......++|+| ++...++.-.|+.|.
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~-dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDG-RGNAYTSLFLDSQVV 355 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECT-TSEEEEEETTTTEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECC-CCeEEEEEecCCcEE
Confidence 446789999987 4566678999999998532 111112222222 234578899999 676566667799999
Q ss_pred EEeCCCC---------CcceEEeccCCCcEE-EE----EecC-CcEEEEecC
Q psy2113 126 LWDLRSP---------KVPLFDMLGHEDKVM-CV----NWSD-YRYIMSGGQ 162 (183)
Q Consensus 126 vwd~~~~---------~~~~~~~~~~~~~v~-~~----~~~~-~~~l~~~~~ 162 (183)
+||+.+. ...+..+..|..+.. +. ..++ +++|++...
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 9999761 222555555544321 11 2233 477776543
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.50 E-value=0.4 Score=33.79 Aligned_cols=114 Identities=5% Similarity=-0.030 Sum_probs=67.0
Q ss_pred cCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEe-ecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 51 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 51 h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
....+..+.+.+++.++.++.+|.+++.+...+.. ......- ......+..+.+.+ ++.+++.+. +|.+ ++..
T Consensus 203 ~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~t---W~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~ 276 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSEN---WGELLSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQ 276 (327)
T ss_dssp SSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEE---ECCCBCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEES
T ss_pred CCCccceeEECCCCCEEEEeCCceEEEecCCCCCe---eEeccCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeC
Confidence 45578888888888887888888888764221110 0000000 01223578898988 666666654 6766 3334
Q ss_pred CCCCcceEEec---cCCCcEEEEEecCCcEEEEecCCCcEEEEEe
Q psy2113 130 RSPKVPLFDML---GHEDKVMCVNWSDYRYIMSGGQDNSVRVFKT 171 (183)
Q Consensus 130 ~~~~~~~~~~~---~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~ 171 (183)
..++. =.... .....+..+.|.++..+++++.+|.|.-++-
T Consensus 277 DgG~t-W~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 277 DGGQT-WQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp STTSS-CEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred CCCcc-cEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 43432 12222 2345678888875566777788998877654
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.43 E-value=0.43 Score=33.64 Aligned_cols=156 Identities=6% Similarity=-0.063 Sum_probs=86.7
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|.+....+...++....+.....+... .....+........++++.+ ++. +++-...+.|.++++.....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~-~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-- 113 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE-SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-- 113 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSS-CCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCC-ceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE--
Confidence 45677877666655555332222111111111 11112222233456788874 455 45556678999999875432
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEe-CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-Cc-EEEEecCCC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YR-YIMSGGQDN 164 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~dg 164 (183)
.............+++.|.++.++.+-. ..+.|...++..... .......-...+.+++++ +. ..++-+..+
T Consensus 114 ----~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~ 188 (318)
T 3sov_A 114 ----KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLN 188 (318)
T ss_dssp ----EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ----EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEECCCCCccEEEEeccCCEEEEEECCCC
Confidence 1122234456789999984454455442 357888888864332 222223334568999995 44 445556677
Q ss_pred cEEEEEecC
Q psy2113 165 SVRVFKTKH 173 (183)
Q Consensus 165 ~i~iwd~~~ 173 (183)
.|..+|+..
T Consensus 189 ~I~~~d~dG 197 (318)
T 3sov_A 189 FIHKSNLDG 197 (318)
T ss_dssp EEEEEETTS
T ss_pred EEEEEcCCC
Confidence 899998764
No 287
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.41 E-value=0.5 Score=37.00 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=47.9
Q ss_pred EEEEecCCCCEEEEEeCCC-------------------eEEEEeCCCCCcceEEecc--CC-------CcEEEEEec-CC
Q psy2113 104 SVRWSPIDPQLFVSASFDN-------------------SVKLWDLRSPKVPLFDMLG--HE-------DKVMCVNWS-DY 154 (183)
Q Consensus 104 ~~~~~p~~~~~l~~~~~dg-------------------~i~vwd~~~~~~~~~~~~~--~~-------~~v~~~~~~-~~ 154 (183)
.+++.| ...+++.+..++ .|.-+|.++++. +-.++. |. .+....... ++
T Consensus 234 ~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~-~W~~~~~~~~~wd~~~~~~~~~~d~~~~G 311 (668)
T 1kv9_A 234 SMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL-AWHYQVTPGDSWDFTATQQITLAELNIDG 311 (668)
T ss_dssp CEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-EEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred ceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce-eeEeecCCCccccccCCCCcEEEEeccCC
Confidence 467888 566777777665 499999999985 433332 22 222222222 33
Q ss_pred ---cEEEEecCCCcEEEEEecCCCCC
Q psy2113 155 ---RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 155 ---~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
..++.++.+|.++++|.++++..
T Consensus 312 ~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 312 KPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cEEEEEEEECCCCEEEEEECCCCCEe
Confidence 36889999999999999888754
No 288
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.12 E-value=0.55 Score=33.10 Aligned_cols=107 Identities=5% Similarity=-0.037 Sum_probs=60.4
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC--C
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL--R 130 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~--~ 130 (183)
+.+..+.+.+++.++.++.++.+. ....... .. ..........+..+.+.| ++.+++.+...+..+-+|- .
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~v~--~S~DgG~--tW--~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~ 194 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGAIY--RTKDSGK--NW--QALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQT 194 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCCEE--EESSTTS--SE--EEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCS
T ss_pred CCeEEEEEECCCCEEEEeCCccEE--EEcCCCC--CC--EEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCC
Confidence 456778777667765555666543 2222211 11 111224456788999998 6777766654334444443 2
Q ss_pred CCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEE
Q psy2113 131 SPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVF 169 (183)
Q Consensus 131 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iw 169 (183)
+.+ .........+..+.+.++..++.++.+|.+++.
T Consensus 195 tW~---~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 195 AWE---PHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp SCE---EEECCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred cee---ECCCCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 222 122344567888888866555566667877766
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.06 E-value=0.71 Score=34.07 Aligned_cols=112 Identities=7% Similarity=0.035 Sum_probs=64.2
Q ss_pred CeeEEEEccC---CeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC---C-eEEE
Q psy2113 54 AISAVQWTAV---DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---N-SVKL 126 (183)
Q Consensus 54 ~v~~~~~~~~---~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g-~i~v 126 (183)
.-..|+|.|+ +.|..+...+.|+.+|..++.. ..+.........+++++ +++++++-... . .+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-------~~~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-------DIKTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE-------EEECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE-------EEeecCCCCccEEEECC-CCCEEEEcCCCCcccceEEE
Confidence 3568899874 6776665558899999876552 23333445689999999 77765554321 1 2333
Q ss_pred EeCCCCCcceEEeccCCCcEEEEEecC-C-cEEEEecCCCcEEEEEecCC
Q psy2113 127 WDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 127 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~ 174 (183)
.+..........+. .......+++++ + .+.++-..++.|+.+|..++
T Consensus 212 ~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 212 FTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp ECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred EECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence 33322211011111 223446677776 4 44445556677888887644
No 290
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.67 E-value=0.43 Score=36.92 Aligned_cols=106 Identities=6% Similarity=0.082 Sum_probs=62.6
Q ss_pred CCeEEEEeC-CCeEEEEEc-CCCCCccCceeEEEeecCCc-----------ceEEEEEecCCCCE----EEEEeCCCeEE
Q psy2113 63 VDEIITSSW-DHTLKIWDA-ELGGMKKGAIVKSTFSSHKE-----------WVQSVRWSPIDPQL----FVSASFDNSVK 125 (183)
Q Consensus 63 ~~~l~s~~~-d~~v~vwd~-~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~p~~~~~----l~~~~~dg~i~ 125 (183)
++.++.++. ++.|.-+|. ++++. +..+..... ....+++.| .+.. ++.++.|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~------lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~ 134 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTI------LWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVA 134 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSE------EEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcE------EEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEE
Confidence 567777777 889999998 77765 333322111 012345544 2333 77788899999
Q ss_pred EEeCCCCCcceEEeccCC----CcEEE-EEecCCcEEEEec------CCCcEEEEEecCCCCC
Q psy2113 126 LWDLRSPKVPLFDMLGHE----DKVMC-VNWSDYRYIMSGG------QDNSVRVFKTKHQPKS 177 (183)
Q Consensus 126 vwd~~~~~~~~~~~~~~~----~~v~~-~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~ 177 (183)
-+|.++++. +-...... ..+.+ -... +..++.++ .+|.|+-+|.++++..
T Consensus 135 AlDa~TG~~-~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 135 ALNAETGET-VWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp EEETTTCCE-EEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEE
T ss_pred EEECCCCCE-EEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEE
Confidence 999999985 33222111 01111 0112 34555555 3789999999988753
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=94.66 E-value=1.2 Score=34.69 Aligned_cols=154 Identities=5% Similarity=-0.006 Sum_probs=88.6
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEE-EeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLIT-LKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMK 86 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~ 86 (183)
..+++|++....+...+.....+..... .+..... +.........|++.. .+. +++-...+.|.+.++.....
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~---~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~- 114 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFM---NGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR- 114 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEET---TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEEC---CCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-
Confidence 5688899877777766643222211111 1111122 222224566888873 355 45656678999999875432
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCCEEEEE-eCCCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-Cc-EEEEecCC
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA-SFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YR-YIMSGGQD 163 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~~~~~d 163 (183)
...+...-.....+++.|..+.++.+- +..+.|...++..... ..+...-.....+++++ ++ ..++-...
T Consensus 115 -----~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~~~~~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 115 -----QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLVPNVGRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp -----EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEECSCSSEEEEEEETTTTEEEEEETTT
T ss_pred -----EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEECCCCCcceEEEccccCEEEEEECCC
Confidence 112223344578999999555555543 2256888888765442 22223445678899885 34 44555566
Q ss_pred CcEEEEEecCC
Q psy2113 164 NSVRVFKTKHQ 174 (183)
Q Consensus 164 g~i~iwd~~~~ 174 (183)
+.|...|+...
T Consensus 188 ~~I~~~d~dG~ 198 (628)
T 4a0p_A 188 NLIESSNMLGL 198 (628)
T ss_dssp TEEEEEETTSC
T ss_pred CEEEEEcCCCC
Confidence 78888887653
No 292
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.61 E-value=1.1 Score=33.91 Aligned_cols=116 Identities=9% Similarity=0.082 Sum_probs=68.5
Q ss_pred CeeEEEE-------ccCCe-EEEEeCCC-------eEEEEEcCC-CCCcc-C-ceeEEEeecCCcceEEEEEecCCCCEE
Q psy2113 54 AISAVQW-------TAVDE-IITSSWDH-------TLKIWDAEL-GGMKK-G-AIVKSTFSSHKEWVQSVRWSPIDPQLF 115 (183)
Q Consensus 54 ~v~~~~~-------~~~~~-l~s~~~d~-------~v~vwd~~~-~~~~~-~-~~~~~~~~~~~~~v~~~~~~p~~~~~l 115 (183)
....|+| .+++. |+.+...+ .+.+.+... +.... . ......+ .....++++|+++.++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LY 262 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY----KQCNGATIHPINGELY 262 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEE
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC----CCceEEEEcCCCCeEE
Confidence 5789999 87765 66555443 255665333 12210 0 0112221 2346778899667777
Q ss_pred EEEeCCCeEEEEeCC-------CCCc-----c-----eEE-e-ccCCCcEEEEEecCC-c-EEEEecCCCcEEEEEecC
Q psy2113 116 VSASFDNSVKLWDLR-------SPKV-----P-----LFD-M-LGHEDKVMCVNWSDY-R-YIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 116 ~~~~~dg~i~vwd~~-------~~~~-----~-----~~~-~-~~~~~~v~~~~~~~~-~-~l~~~~~dg~i~iwd~~~ 173 (183)
++-..++.|..+|+. ++.. + ... . .+.......++|+|+ + ..++-+....|+.++...
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 777788999999997 4442 0 111 1 122345688999966 5 355556677888876543
No 293
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=94.49 E-value=0.97 Score=32.93 Aligned_cols=119 Identities=7% Similarity=-0.028 Sum_probs=73.8
Q ss_pred cCCCeeEEEEcc-CCeEEEEe--CCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEE
Q psy2113 51 HKEAISAVQWTA-VDEIITSS--WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 127 (183)
Q Consensus 51 h~~~v~~~~~~~-~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vw 127 (183)
.......|++.| .+.|+-.. ..+.|...++..... .......-.....|+++|.++.+.++=...+.|..+
T Consensus 200 ~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~------~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~ 273 (400)
T 3p5b_L 200 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI------YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 273 (400)
T ss_dssp SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc------EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEE
Confidence 344578899987 45544333 247888888865432 112222335678999998455555555567799999
Q ss_pred eCCCCCcceEEec--cCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCCC
Q psy2113 128 DLRSPKVPLFDML--GHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 128 d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
|+..... ..... ........++...+..+++-...+.|..+|..+++.
T Consensus 274 d~dG~~~-~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 274 DVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 323 (400)
T ss_dssp ETTSCCC-EEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCC
T ss_pred eCCCCcc-EEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCc
Confidence 9875443 22222 123445677776666777777778898888655543
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.41 E-value=1.6 Score=35.07 Aligned_cols=155 Identities=8% Similarity=-0.013 Sum_probs=86.8
Q ss_pred EEEEEeecCcEEEEEEeccCCCCcccccccCccceEEE-eccCCCeeEEEEccC-CeEEEEe-C-CCeEEEEEcCCCCCc
Q psy2113 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITL-KGHKEAISAVQWTAV-DEIITSS-W-DHTLKIWDAELGGMK 86 (183)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~-~~l~s~~-~-d~~v~vwd~~~~~~~ 86 (183)
.++++.+.+..|...+.....+... ...+.....+ .........|++.|. +.|+-.. . .+.|.+.++.....
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~---~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~- 549 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVA---DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI- 549 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEE---ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-
T ss_pred ceeeeeecCCcEEEEecCCCeEEEE---eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-
Confidence 4677777666665555221111111 1122222233 233445789999875 5654433 3 37888888865432
Q ss_pred cCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEecc--CCCcEEEEEecCCcEEEEecCCC
Q psy2113 87 KGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG--HEDKVMCVNWSDYRYIMSGGQDN 164 (183)
Q Consensus 87 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~dg 164 (183)
...+...-.....|++.+.++.++++=...+.|...++..... ...... .-.....|+...+.++++-...+
T Consensus 550 -----~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~~lYwtD~~~~ 623 (791)
T 3m0c_C 550 -----YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINE 623 (791)
T ss_dssp -----EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTTT
T ss_pred -----EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCCEEEEEECCCC
Confidence 1122223356889999984555555555567899999875443 222222 22345667766656666666677
Q ss_pred cEEEEEecCCC
Q psy2113 165 SVRVFKTKHQP 175 (183)
Q Consensus 165 ~i~iwd~~~~~ 175 (183)
.|...|..+++
T Consensus 624 ~I~~~dk~tG~ 634 (791)
T 3m0c_C 624 AIFSANRLTGS 634 (791)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEeCCCCc
Confidence 78777765553
No 295
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.30 E-value=0.057 Score=38.58 Aligned_cols=109 Identities=6% Similarity=-0.004 Sum_probs=62.2
Q ss_pred CCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecC-CcceEEEEE--ecCCCCEEEEE-eCCCeEEEEeCCCCCcceEE
Q psy2113 63 VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH-KEWVQSVRW--SPIDPQLFVSA-SFDNSVKLWDLRSPKVPLFD 138 (183)
Q Consensus 63 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--~p~~~~~l~~~-~~dg~i~vwd~~~~~~~~~~ 138 (183)
++.++.++.||.++-.|..+++. ...+... ..++....- .+.++..++.. ..||.+..+|..++.. ...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~------~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~-~~~ 82 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHI------IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ-KLP 82 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEE------EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-EEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcE------EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-Eee
Confidence 45688899999999999887765 4444332 112222110 01122333333 5799999999887743 211
Q ss_pred ecc----CCCcEEE---EEe------cCCcEEEEecCCCcEEEEEecCCCCCC
Q psy2113 139 MLG----HEDKVMC---VNW------SDYRYIMSGGQDNSVRVFKTKHQPKSG 178 (183)
Q Consensus 139 ~~~----~~~~v~~---~~~------~~~~~l~~~~~dg~i~iwd~~~~~~~~ 178 (183)
... ..+++.. ... +.+..+++|+.+|.+...|+++++...
T Consensus 83 ~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 83 LSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIIS 135 (339)
T ss_dssp EEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEE
T ss_pred eccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEE
Confidence 110 1122221 000 135788899999999988888876543
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.07 E-value=2.3 Score=35.71 Aligned_cols=111 Identities=16% Similarity=0.231 Sum_probs=67.3
Q ss_pred CeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCC-----CCEEEEEeC-CCeEEEE
Q psy2113 54 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID-----PQLFVSASF-DNSVKLW 127 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~-----~~~l~~~~~-dg~i~vw 127 (183)
.|...+.+. .+++.++ ++.+.++++..++... ... ..-...|.|+++.|.. ..+++.|.. |++++++
T Consensus 515 ~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~----~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 515 NISVASCNS-SQVVVAV-GRALYYLQIHPQELRQ----ISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp CCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEE----EEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred EEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceee----ecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 454444332 3444444 5778788776533211 111 1235679999997622 368888886 9999999
Q ss_pred eCCCCCcceEEe-ccCCCcEEEEEec--CC-cEEEEecCCCcEEEEEec
Q psy2113 128 DLRSPKVPLFDM-LGHEDKVMCVNWS--DY-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 128 d~~~~~~~~~~~-~~~~~~v~~~~~~--~~-~~l~~~~~dg~i~iwd~~ 172 (183)
++.+.+. +... .+....+.++... .+ .+|..|-.||.+.-+.+.
T Consensus 588 sL~~l~~-~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 588 KLPSFEL-LHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp ETTTCCE-EEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred ECCCCCe-EEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 9987553 3221 1222344555443 33 688999999998766654
No 297
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=93.77 E-value=1.1 Score=31.01 Aligned_cols=155 Identities=12% Similarity=0.132 Sum_probs=79.2
Q ss_pred ceeEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeC--CC-eEEEEEcCCCC
Q psy2113 8 ILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DH-TLKIWDAELGG 84 (183)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~--d~-~v~vwd~~~~~ 84 (183)
....++++++++.++.+.. ....+..+ +. .......+ ........+++.+++.++.+.. ++ .+..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~-~~~~I~~~--d~-~g~~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNH-EVGEIVSI--TP-DGNQQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEET-TTTEEEEE--CT-TCCEEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeC-CCCeEEEE--CC-CCceEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 4567889999988655532 11111111 11 11222222 2234678999998887655542 22 46666765554
Q ss_pred CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEe---------ccCCCcEEEEEecCCc
Q psy2113 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM---------LGHEDKVMCVNWSDYR 155 (183)
Q Consensus 85 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---------~~~~~~v~~~~~~~~~ 155 (183)
... .... ........++..+ ++..+++-..++.|.++|...++..+... ...-...+.+....+.
T Consensus 107 ~~~----~~~~-~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ 180 (306)
T 2p4o_A 107 VET----LLTL-PDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNF 180 (306)
T ss_dssp EEE----EEEC-TTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTE
T ss_pred EEE----EEeC-CCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCE
Confidence 310 1111 1122334455445 55455555468899999987542101100 0111234556222224
Q ss_pred EEEEecCCCcEEEEEecC
Q psy2113 156 YIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~ 173 (183)
.+++-...+.|..+++..
T Consensus 181 lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEEETTTTEEEEEEBCT
T ss_pred EEEEeCCCCEEEEEEeCC
Confidence 556666788999999875
No 298
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=93.69 E-value=1.1 Score=30.61 Aligned_cols=159 Identities=9% Similarity=0.044 Sum_probs=84.1
Q ss_pred eeEEEEEeecCcEEE-EEEeccCCCCcccccccCccceEEEec-cCCCeeEEEEccCCeEE-EEeCCCeEEEEEcCCCCC
Q psy2113 9 LTLGVIFMTVGALLT-LTNIEVTSLPSFFQLILQKTPLITLKG-HKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGM 85 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~l~-s~~~d~~v~vwd~~~~~~ 85 (183)
...+++|+|++..+. +.+ +--.+..+ +. .++.+..+.- -......|++.+++.++ +.-.++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d-~~~~I~~l--d~-~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTIN-KPAAIVEM--TT-NGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp CEEEEEEETTTTEEEEEEE-TTEEEEEE--ET-TCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred CcceeEEeCCCCEEEEEEC-CCCeEEEE--eC-CCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 467899999766554 444 21111111 12 2445555432 22457788998888864 444678899998865442
Q ss_pred ccCceeEEEe----ecCCcceEEEEEecCCCCEEEEEeCCC-eEEEEeCC-CCCcceEEec-------cCCCcEEEEEec
Q psy2113 86 KKGAIVKSTF----SSHKEWVQSVRWSPIDPQLFVSASFDN-SVKLWDLR-SPKVPLFDML-------GHEDKVMCVNWS 152 (183)
Q Consensus 86 ~~~~~~~~~~----~~~~~~v~~~~~~p~~~~~l~~~~~dg-~i~vwd~~-~~~~~~~~~~-------~~~~~v~~~~~~ 152 (183)
... .....+ .......-.++++|.+.+++++.-.+. .|+.|+-. .... ..... .+...+..++++
T Consensus 104 i~~-~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~-l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 104 VKI-LKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE-LHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp EEE-EEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC-CEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eee-eeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc-eeeecchhhccccccCCceeEEEc
Confidence 110 001111 123455789999994334444443343 45555511 1111 22221 123356788888
Q ss_pred CC--cEEEEecCCCcEEEEEecC
Q psy2113 153 DY--RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 153 ~~--~~l~~~~~dg~i~iwd~~~ 173 (183)
|. .+++....+..|..+|...
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTTC
T ss_pred CCCCeEEEEECCCCeEEEEcCCC
Confidence 64 5666666667777777553
No 299
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.66 E-value=1.1 Score=34.41 Aligned_cols=104 Identities=11% Similarity=0.113 Sum_probs=61.1
Q ss_pred CCeEEEEeC-CCeEEEEEc-CCCCCccCceeEEEeecCCc----------ce-EEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 63 VDEIITSSW-DHTLKIWDA-ELGGMKKGAIVKSTFSSHKE----------WV-QSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 63 ~~~l~s~~~-d~~v~vwd~-~~~~~~~~~~~~~~~~~~~~----------~v-~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
++.++.++. ++.+.-+|. .+++. +..+..... .+ ..+.. .+..++.++.|+.+..+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~------~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~dg~l~alD~ 132 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKI------VWQHKPKQDASTKAVMCCDVVDRGLAY---GAGQIVKKQANGHLLALDA 132 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSE------EEEECCCCCGGGGGGCTTCSCCCCCEE---ETTEEEEECTTSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccE------EEEEcCCCCccccccccccccccccEE---ECCEEEEEeCCCEEEEEEC
Confidence 567777777 889999998 77765 333321110 00 11222 2346777788999999999
Q ss_pred CCCCcceEEeccCC----CcEEE-EEecCCcEEEEecC------CCcEEEEEecCCCCC
Q psy2113 130 RSPKVPLFDMLGHE----DKVMC-VNWSDYRYIMSGGQ------DNSVRVFKTKHQPKS 177 (183)
Q Consensus 130 ~~~~~~~~~~~~~~----~~v~~-~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~ 177 (183)
++++. +-...... ..+.+ .... +..++.++. ++.|..+|.++++..
T Consensus 133 ~tG~~-~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~ 189 (571)
T 2ad6_A 133 KTGKI-NWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELK 189 (571)
T ss_dssp TTCCE-EEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEE
T ss_pred CCCCE-EEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEE
Confidence 99985 33222111 01111 0111 345555554 789999999887754
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.65 E-value=2 Score=33.42 Aligned_cols=156 Identities=6% Similarity=-0.065 Sum_probs=88.4
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|++.+..+...++....+.....+.. ......+.........+++.+ ++. +++-...+.|.+.++.....
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~-~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-- 118 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT-ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-- 118 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCC-CceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE--
Confidence 5688899877777766643222211111111 111222333335678899986 455 45556778999999876442
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeC-CCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-C-cEEEEecCCC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-Y-RYIMSGGQDN 164 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg 164 (183)
.......-.....|++.|..+.++.+--. .+.|...++..... .......-...+.+++++ + .+.++-...+
T Consensus 119 ----~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~~P~Glald~~~~~LY~aD~~~~ 193 (619)
T 3s94_A 119 ----KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSEIYWPNGLTLDYEEQKLYWADAKLN 193 (619)
T ss_dssp ----EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSSEEEEEEETTTTEEEEEETTTC
T ss_pred ----EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCCCCCCcEEEEEccCCEEEEEeCCCC
Confidence 11222334456789999954555555422 46777777764332 223333345678899884 3 4445555667
Q ss_pred cEEEEEecC
Q psy2113 165 SVRVFKTKH 173 (183)
Q Consensus 165 ~i~iwd~~~ 173 (183)
.|...|+..
T Consensus 194 ~I~~~~~dG 202 (619)
T 3s94_A 194 FIHKSNLDG 202 (619)
T ss_dssp CEEEESSSC
T ss_pred eEEEecCCC
Confidence 788888764
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.49 E-value=1.5 Score=31.43 Aligned_cols=103 Identities=12% Similarity=0.075 Sum_probs=59.1
Q ss_pred cCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEe---ecCCcceEEEEEecC---CCCEEEEEeC---C
Q psy2113 51 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF---SSHKEWVQSVRWSPI---DPQLFVSASF---D 121 (183)
Q Consensus 51 h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~p~---~~~~l~~~~~---d 121 (183)
.-..-..++|.|++.|+.+..++.|+++|. .+. . ....+ .........++++|+ ++.++++-.. +
T Consensus 27 ~l~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~----~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 27 DLEVPWSIAPLGGGRYLVTERPGRLVLISP-SGK-K----LVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp SCSCEEEEEEEETTEEEEEETTTEEEEECS-SCE-E----EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-e----EeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 344567999999999888888899998873 222 1 12111 112346889999994 3555554432 3
Q ss_pred ----CeEEEEeCCCCC------cce-EEec-cCCCcEEEEEecCC-cEEEE
Q psy2113 122 ----NSVKLWDLRSPK------VPL-FDML-GHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 122 ----g~i~vwd~~~~~------~~~-~~~~-~~~~~v~~~~~~~~-~~l~~ 159 (183)
..|..|+..... ..+ ..+. ........++|.|+ .+.++
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 567777766441 101 1122 11123467889866 44444
No 302
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.05 E-value=1.7 Score=31.01 Aligned_cols=79 Identities=14% Similarity=0.163 Sum_probs=46.0
Q ss_pred CCCeeEEEEccCCe-EEEEeCCCeEEEEEcCCCCCccCceeE-EEeecCCcceEEEEEecC---CCCEEEEEeC------
Q psy2113 52 KEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVK-STFSSHKEWVQSVRWSPI---DPQLFVSASF------ 120 (183)
Q Consensus 52 ~~~v~~~~~~~~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~p~---~~~~l~~~~~------ 120 (183)
-..-..|+|.|++. ++.+...+.|++++... .......-. ............++++|+ ++.+.++-..
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 34567999999998 88888899999998532 111000000 011122345789999994 3545554332
Q ss_pred -CCeEEEEeCCC
Q psy2113 121 -DNSVKLWDLRS 131 (183)
Q Consensus 121 -dg~i~vwd~~~ 131 (183)
...|..++...
T Consensus 96 ~~~~v~r~~~~~ 107 (353)
T 2g8s_A 96 AGTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEEECT
T ss_pred ceeEEEEEEECC
Confidence 23566666643
No 303
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=92.68 E-value=1.5 Score=30.23 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=47.6
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEeCCCCCcceEEeccCC--Cc
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDLRSPKVPLFDMLGHE--DK 145 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~--~~ 145 (183)
..+.+||+.+..... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+.+- ..+.... ..
T Consensus 173 ~~~~~yd~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~~~r~ 243 (302)
T 2xn4_A 173 STVECYNATTNEWTY----IAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAW--RQVADMNMCRR 243 (302)
T ss_dssp CCEEEEETTTTEEEE----ECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEE--EEECCCSSCCB
T ss_pred cEEEEEeCCCCcEEE----CCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCE--eeCCCCCCccc
Confidence 457888887654321 1111111111122222 56677777654 3688999987642 1111111 11
Q ss_pred EEEEEecCCcEEEEecCCC-----cEEEEEecCC
Q psy2113 146 VMCVNWSDYRYIMSGGQDN-----SVRVFKTKHQ 174 (183)
Q Consensus 146 v~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 174 (183)
-..+....+..++.|+.++ .+.+||+++.
T Consensus 244 ~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 244 NAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred cCeEEEECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 1123333556777777654 4888888764
No 304
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.66 E-value=2 Score=30.78 Aligned_cols=83 Identities=17% Similarity=0.095 Sum_probs=50.3
Q ss_pred eEEEeccCCCeeEEEEccCCeEEEEeC-CCeEEEEEcCCCCCccCceeEEEe----ecCCcceEEEEEecC---CCCEEE
Q psy2113 45 LITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTF----SSHKEWVQSVRWSPI---DPQLFV 116 (183)
Q Consensus 45 ~~~~~~h~~~v~~~~~~~~~~l~s~~~-d~~v~vwd~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~p~---~~~~l~ 116 (183)
+..+...-..-..|+|.|++.++.... .|.|++++...+... ....+ .........++++|+ ++.+.+
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~----~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKT----ELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE----EEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEe----eecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 344444555678999999998777776 899999876543321 11111 123456899999993 244444
Q ss_pred EE--eCCCeEEEEeCCC
Q psy2113 117 SA--SFDNSVKLWDLRS 131 (183)
Q Consensus 117 ~~--~~dg~i~vwd~~~ 131 (183)
+- ..+..|.-|....
T Consensus 100 ~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 100 YFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECSSSEEEEEEEBCT
T ss_pred EEecCCCCEEEEEEeCC
Confidence 32 2345666666554
No 305
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.40 E-value=3.1 Score=32.37 Aligned_cols=116 Identities=4% Similarity=-0.089 Sum_probs=74.4
Q ss_pred cCCCeeEEEEcc-CCeEEEEe--CCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEE
Q psy2113 51 HKEAISAVQWTA-VDEIITSS--WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 127 (183)
Q Consensus 51 h~~~v~~~~~~~-~~~l~s~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vw 127 (183)
....-..|++.| .+.|.-.. ..+.|...++..... ..+...-.....+++++.++++..+=...+.|...
T Consensus 121 ~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-------~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 121 DLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-------TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp SCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-------EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-------EEEECCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 344567899986 46654443 356788787765442 12223445678999999445555555567899999
Q ss_pred eCCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 128 DLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 128 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
|+..... ..+.........+++..+..+++-...+.|...|..+++
T Consensus 194 d~dG~~~--~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 194 NMLGLNR--EVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp ETTSCSC--EEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCCce--EEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCC
Confidence 9976443 233333445567777766666676678888888866554
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.32 E-value=1.8 Score=29.77 Aligned_cols=104 Identities=13% Similarity=0.228 Sum_probs=52.5
Q ss_pred CCe-EEEEeCC-----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEeCCC
Q psy2113 63 VDE-IITSSWD-----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDLRS 131 (183)
Q Consensus 63 ~~~-l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd~~~ 131 (183)
++. ++.|+.+ ..+.+||+.+..... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~----~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN----VTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEE----ECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEe----CCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCC
Confidence 344 5555543 458888887654321 1111111111122222 55677777654 4689999987
Q ss_pred CCcceE-EeccCCCcEEEEEecCCcEEEEecCC-----CcEEEEEecCC
Q psy2113 132 PKVPLF-DMLGHEDKVMCVNWSDYRYIMSGGQD-----NSVRVFKTKHQ 174 (183)
Q Consensus 132 ~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 174 (183)
.+-... ........ ..+...++..++.|+.+ ..+.+||+++.
T Consensus 232 ~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 232 DSWTTVTSMTTPRCY-VGATVLRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp TEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CcEEECCCCCCcccc-eeEEEECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 653111 11111111 12223355677777665 35778887764
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.68 E-value=2 Score=29.49 Aligned_cols=104 Identities=13% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCe-EEEEeCCC-----eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-------CeEEEEeC
Q psy2113 63 VDE-IITSSWDH-----TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-------NSVKLWDL 129 (183)
Q Consensus 63 ~~~-l~s~~~d~-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-------g~i~vwd~ 129 (183)
++. ++.|+.++ .+.+||+.+..... ...+.........+.+ ++.+++.|+.+ ..+..||+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~ 180 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH----VAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNA 180 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEE----ECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEET
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEee----cCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeC
Confidence 344 56666543 57788877654321 1111111111122222 45666766542 35889999
Q ss_pred CCCCcceE-EeccCCCcEEEEEecCCcEEEEecCCC-----cEEEEEecCC
Q psy2113 130 RSPKVPLF-DMLGHEDKVMCVNWSDYRYIMSGGQDN-----SVRVFKTKHQ 174 (183)
Q Consensus 130 ~~~~~~~~-~~~~~~~~v~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 174 (183)
.+.+-... ........ .++....+..++.|+.++ .+.+||+++.
T Consensus 181 ~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 181 TTNEWTYIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCCcEEECCCCcccccc-ccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 87642111 11111111 223333556777776643 5888887654
No 308
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.51 E-value=2.3 Score=29.52 Aligned_cols=100 Identities=10% Similarity=0.147 Sum_probs=49.8
Q ss_pred EEEEeC------CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC-----eEEEEeCCCCCc
Q psy2113 66 IITSSW------DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDLRSPKV 134 (183)
Q Consensus 66 l~s~~~------d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg-----~i~vwd~~~~~~ 134 (183)
++.|+. ...+.+||+.+..... ...+........++.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKE----LAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEE----CCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEE----CCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 556655 2468888887654321 1111111111122222 556777776544 588899987642
Q ss_pred ceEEecc--CCCcEEEEEecCCcEEEEecCCC--------------cEEEEEecCC
Q psy2113 135 PLFDMLG--HEDKVMCVNWSDYRYIMSGGQDN--------------SVRVFKTKHQ 174 (183)
Q Consensus 135 ~~~~~~~--~~~~v~~~~~~~~~~l~~~~~dg--------------~i~iwd~~~~ 174 (183)
..+.. ....-.++....+..++.|+.++ .+.+||+++.
T Consensus 225 --~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 225 --APFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp --EEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred --EECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 11111 11111223333556666666542 3677887664
No 309
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.90 E-value=6.6 Score=33.11 Aligned_cols=115 Identities=9% Similarity=0.037 Sum_probs=69.4
Q ss_pred cCCCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEe--
Q psy2113 51 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD-- 128 (183)
Q Consensus 51 h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd-- 128 (183)
..++|++++-- +|+|++|- ..++++|++...+... .....+. .+..+.... .+++++.|..-..+.+..
T Consensus 884 v~g~v~al~~~-~g~Lla~i-g~~l~vy~l~~~~~L~-----~~~~~~~-~i~~~~l~~-~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 884 VKGAVYSMVEF-NGKLLASI-NSTVRLYEWTTEKELR-----TECNHYN-NIMALYLKT-KGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp ESSCEEEEEEE-TTEEEEEE-TTEEEEEEECTTSCEE-----EEEEECC-CSCEEEEEE-ETTEEEEEESSBCEEEEEEE
T ss_pred cCCcCEEEeee-CCEEEEEc-CCEEEEEECCCCceEE-----EEeeccc-cEEEEEEec-cCCEEEEEEhhheEEEEEEE
Confidence 46778887743 35666554 5799999997654311 1111111 122222322 456888888766666554
Q ss_pred CCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 129 LRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
....+........+...++++.+.+...++.+..+|.|.+......
T Consensus 955 ~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~~ 1000 (1158)
T 3ei3_A 955 PMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDSA 1000 (1158)
T ss_dssp TTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECTT
T ss_pred cCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCCC
Confidence 4333321222233556788999886678888999999999887664
No 310
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.67 E-value=4.9 Score=31.24 Aligned_cols=156 Identities=9% Similarity=-0.009 Sum_probs=86.2
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCccceEEEeccCCCeeEEEEcc-CCe-EEEEeCCCeEEEEEcCCCCCcc
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKK 87 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~-l~s~~~d~~v~vwd~~~~~~~~ 87 (183)
..+++|.+.+..+...+.....+.....+. ......+........++++.. .+. +++-+..+.|.+.++.....
T Consensus 351 ~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g--~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~-- 426 (619)
T 3s94_A 351 AIAIDYDPVEGYIYWTDDEVRAIRRSFIDG--SGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR-- 426 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTS--CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC--
T ss_pred cEEEEEEcCCCeEEEEeCCCCeEEEEEcCC--CccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE--
Confidence 456778876666665553222211111111 111122222334567888874 455 55666778999999875432
Q ss_pred CceeEEEeecCCcceEEEEEecCCCCEEEEEeC-CCeEEEEeCCCCCcceEEeccCCCcEEEEEecC-CcEE-EEecCCC
Q psy2113 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYI-MSGGQDN 164 (183)
Q Consensus 88 ~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l-~~~~~dg 164 (183)
.......-.....+++.|..+.++.+-.. .+.|...++..... .......-...+.+++++ ++.| ++-+..+
T Consensus 427 ----~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~ 501 (619)
T 3s94_A 427 ----KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNTSLGWPNGLALDYDEGKIYWGDAKTD 501 (619)
T ss_dssp ----EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ----EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeCCCCCCeeeEEcccCCEEEEEECCCC
Confidence 11222334567899999954655555432 36777777654332 223333345678888884 4444 4445566
Q ss_pred cEEEEEecCC
Q psy2113 165 SVRVFKTKHQ 174 (183)
Q Consensus 165 ~i~iwd~~~~ 174 (183)
.|...++...
T Consensus 502 ~I~~~~~dG~ 511 (619)
T 3s94_A 502 KIEVMNTDGT 511 (619)
T ss_dssp EEEEEESSSC
T ss_pred EEEEEecCCC
Confidence 7888887544
No 311
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=90.04 E-value=0.77 Score=35.33 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=46.4
Q ss_pred CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCc-EEEEE
Q psy2113 72 DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVN 150 (183)
Q Consensus 72 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-v~~~~ 150 (183)
++.+..||+.+++. ....... .++..-.... .+.+++.++.|+.++.||.++++. +-.+...... ..-+.
T Consensus 465 ~G~l~A~D~~tG~~------~W~~~~~-~~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~-lW~~~~~~g~~a~P~~ 535 (582)
T 1flg_A 465 VGSLRAMDPVSGKV------VWEHKEH-LPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKE-LWKFQTGSGIVSPPIT 535 (582)
T ss_dssp SEEEEEECTTTCCE------EEEEEES-SCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCE-EEEEECSSCCCSCCEE
T ss_pred cceEEEEECCCCCE------EEEecCC-CCCcccceEe-CCCEEEEECCCCcEEEEECCCCCE-EEEecCCCCcccCceE
Confidence 57899999988774 3333222 1221111122 355777899999999999999986 5444432221 12355
Q ss_pred ec-CC-cEEEEe
Q psy2113 151 WS-DY-RYIMSG 160 (183)
Q Consensus 151 ~~-~~-~~l~~~ 160 (183)
|. ++ .++++.
T Consensus 536 y~~~G~qYv~~~ 547 (582)
T 1flg_A 536 WEQDGEQYLGVT 547 (582)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCEEEEEEE
Confidence 54 44 455443
No 312
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.07 E-value=4.2 Score=28.09 Aligned_cols=103 Identities=13% Similarity=0.203 Sum_probs=52.1
Q ss_pred CCe-EEEEeCC-----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEeCCC
Q psy2113 63 VDE-IITSSWD-----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDLRS 131 (183)
Q Consensus 63 ~~~-l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd~~~ 131 (183)
++. ++.|+.+ ..+.+||+.+..... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRM----ITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEE----CCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEee----CCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCC
Confidence 344 5555543 458888887654321 1111111111222222 55677777654 4689999987
Q ss_pred CCcceEEeccCC--CcEEEEEecCCcEEEEecCC-----CcEEEEEecCC
Q psy2113 132 PKVPLFDMLGHE--DKVMCVNWSDYRYIMSGGQD-----NSVRVFKTKHQ 174 (183)
Q Consensus 132 ~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 174 (183)
.+- ..+.... ..-.++....+..++.|+.+ ..+.+||+++.
T Consensus 241 ~~W--~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 241 ETW--TFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp TEE--EECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CcE--EECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 642 1111111 11122333355677777654 34778887764
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=88.41 E-value=6.3 Score=29.31 Aligned_cols=110 Identities=11% Similarity=0.213 Sum_probs=59.4
Q ss_pred EEEeccCCCeeEEEEccCCeEEEEeCCC-eEEEEEcCCCCCccCceeEEEee------cCCcceEEEEEecC---CCCEE
Q psy2113 46 ITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFS------SHKEWVQSVRWSPI---DPQLF 115 (183)
Q Consensus 46 ~~~~~h~~~v~~~~~~~~~~l~s~~~d~-~v~vwd~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~p~---~~~~l 115 (183)
..+...-..-..|+|.|++.|+.+...+ .|++++..++... ....+. ........|+|+|+ ++.+.
T Consensus 20 ~~~a~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~----~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 20 KVILSNLNKPHALLWGPDNQIWLTERATGKILRVNPESGSVK----TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp EEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE----EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred EEEECCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEe----EEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 3333334456799999999988777775 6888875443321 111121 12456789999994 44444
Q ss_pred EEEeC------------CCeEEEEeCCCCC------cceE-Eec-cCCCcEEEEEecCC-cEEEE
Q psy2113 116 VSASF------------DNSVKLWDLRSPK------VPLF-DML-GHEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 116 ~~~~~------------dg~i~vwd~~~~~------~~~~-~~~-~~~~~v~~~~~~~~-~~l~~ 159 (183)
++-+. ...|.-++..... ..+. .+. ........|+|.++ .+.++
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 44432 2345555543321 1011 122 11235688999966 44444
No 314
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.26 E-value=5.6 Score=28.60 Aligned_cols=99 Identities=16% Similarity=0.272 Sum_probs=60.3
Q ss_pred eEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCC----C---EEEEEe-C--CCeEEEEeCCCCCc
Q psy2113 65 EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDP----Q---LFVSAS-F--DNSVKLWDLRSPKV 134 (183)
Q Consensus 65 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~----~---~l~~~~-~--dg~i~vwd~~~~~~ 134 (183)
.++.....+-+.+||+ .++. +..+.. +.++.+..-| +- . ++++.. . ++.|.+|++.....
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~------l~~~~~--g~~nnVD~r~-~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKM------LHSYNT--GKLNNVDIRY-DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCE------EEEECC--SCEEEEEEEE-EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred EEEEEcCCCCEEEEcC-CCcE------EEEccC--CCcccEEEec-ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 3666677889999999 4443 444432 5677777766 32 1 233333 3 57899997642221
Q ss_pred ceEEecc------CC-CcEEEEEe--cC--C-cEEEEecCCCcEEEEEecC
Q psy2113 135 PLFDMLG------HE-DKVMCVNW--SD--Y-RYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 135 ~~~~~~~------~~-~~v~~~~~--~~--~-~~l~~~~~dg~i~iwd~~~ 173 (183)
++..... .. ..+..+++ ++ + .++++...+|.+..|++..
T Consensus 112 ~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~ 162 (355)
T 3amr_A 112 TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKA 162 (355)
T ss_dssp CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEe
Confidence 2433321 11 45666776 54 2 3688888899999999854
No 315
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=88.13 E-value=5.7 Score=28.52 Aligned_cols=132 Identities=8% Similarity=0.096 Sum_probs=80.7
Q ss_pred CccceEEEeccCCCeeEEEEccC--C-eE-EEEeC---CCeEEEEEcCCC---CCccCceeEEEeec---CCcceEEEEE
Q psy2113 41 QKTPLITLKGHKEAISAVQWTAV--D-EI-ITSSW---DHTLKIWDAELG---GMKKGAIVKSTFSS---HKEWVQSVRW 107 (183)
Q Consensus 41 ~~~~~~~~~~h~~~v~~~~~~~~--~-~l-~s~~~---d~~v~vwd~~~~---~~~~~~~~~~~~~~---~~~~v~~~~~ 107 (183)
..+..+.+++|......+....+ . .+ .-+.. .+++++-++... ...-.......+.. ..+...++..
T Consensus 188 er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqv 267 (365)
T 2xzh_A 188 DRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQI 267 (365)
T ss_dssp TTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEE
T ss_pred cccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEe
Confidence 34455677888776655554411 1 23 32322 268999998543 11111111111211 2455678888
Q ss_pred ecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCC
Q psy2113 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 108 ~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
++ ....+..-..-|.+++||++++.+ +..-+-..++|..-+.. ...-++.....|.|.--.++..
T Consensus 268 s~-kygviyviTK~G~ihlyDleTgt~-i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 268 SE-KHDVVFLITKYGYIHLYDLETGTC-IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp ET-TTTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred cc-cCCEEEEEeCCcEEEEEEcccCcE-EEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 88 566788888899999999999987 66666666777655554 3356666778888876665543
No 316
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=88.02 E-value=3.9 Score=28.26 Aligned_cols=104 Identities=14% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCe-EEEEeCC-----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEeCCC
Q psy2113 63 VDE-IITSSWD-----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDLRS 131 (183)
Q Consensus 63 ~~~-l~s~~~d-----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd~~~ 131 (183)
++. ++.|+.+ ..+.+||+.+...... ..+.........+.+ ++.+++.|+.+ ..+..||+.+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~----~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLV----APMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEEC----CCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeEC----CCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 344 4555433 4678888876543211 111111111122222 45677777654 4588899877
Q ss_pred CCcc-eEEeccCCCcEEEEEecCCcEEEEecCC-----CcEEEEEecCC
Q psy2113 132 PKVP-LFDMLGHEDKVMCVNWSDYRYIMSGGQD-----NSVRVFKTKHQ 174 (183)
Q Consensus 132 ~~~~-~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 174 (183)
.+-. +......... .++....+..++.|+.+ ..+.+||+.+.
T Consensus 194 ~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 194 NEWRMITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CeEeeCCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 5420 1011111111 12223355667777664 45888887764
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.64 E-value=5.2 Score=27.48 Aligned_cols=103 Identities=10% Similarity=0.073 Sum_probs=51.7
Q ss_pred CCe-EEEEeCC----CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC------CeEEEEeCCC
Q psy2113 63 VDE-IITSSWD----HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD------NSVKLWDLRS 131 (183)
Q Consensus 63 ~~~-l~s~~~d----~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d------g~i~vwd~~~ 131 (183)
++. ++.|+.+ ..+.+||..+..... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYS----KLGPPTPRDSLAACAA---EGKIYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEE----EECCSSCCBSCEEEEE---TTEEEEECCBBTTBSCCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEE----CCCCCccccceeEEEE---CCEEEEECCCCCCCcEeeeEEEEeCCC
Confidence 344 5666644 678888987765321 1111111111122222 55677777655 4688999987
Q ss_pred CCcceEEeccCC--CcEEEEEecCCcEEEEecC---------CCcEEEEEecCC
Q psy2113 132 PKVPLFDMLGHE--DKVMCVNWSDYRYIMSGGQ---------DNSVRVFKTKHQ 174 (183)
Q Consensus 132 ~~~~~~~~~~~~--~~v~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~ 174 (183)
.+- ....... ..-.++....+..++.|+. -..+.+||+.+.
T Consensus 128 ~~W--~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~ 179 (306)
T 3ii7_A 128 ESW--HTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE 179 (306)
T ss_dssp TEE--EEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT
T ss_pred Cce--EeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC
Confidence 642 1111111 1111222335556666654 234778887665
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.42 E-value=4.4 Score=28.04 Aligned_cols=93 Identities=12% Similarity=0.100 Sum_probs=46.1
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC-C-----CeEEEEeCCCCCcceEEeccCC--C
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF-D-----NSVKLWDLRSPKVPLFDMLGHE--D 144 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~-d-----g~i~vwd~~~~~~~~~~~~~~~--~ 144 (183)
..+.+||..+..... ...+...... .++.. - ++.+++.|+. + ..+.+||+.+.+- ....... .
T Consensus 117 ~~~~~~d~~~~~W~~----~~~~p~~r~~-~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r 187 (315)
T 4asc_A 117 DSVMCYDRLSFKWGE----SDPLPYVVYG-HTVLS-H-MDLVYVIGGKGSDRKCLNKMCVYDPKKFEW--KELAPMQTAR 187 (315)
T ss_dssp CCEEEEETTTTEEEE----CCCCSSCCBS-CEEEE-E-TTEEEEECCBCTTSCBCCCEEEEETTTTEE--EECCCCSSCC
T ss_pred ceEEEECCCCCcEeE----CCCCCCcccc-eeEEE-E-CCEEEEEeCCCCCCcccceEEEEeCCCCeE--EECCCCCCch
Confidence 458888887654321 1111111111 22222 2 5567777765 2 4688999987642 1111111 1
Q ss_pred cEEEEEecCCcEEEEecCCC-----cEEEEEecCC
Q psy2113 145 KVMCVNWSDYRYIMSGGQDN-----SVRVFKTKHQ 174 (183)
Q Consensus 145 ~v~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 174 (183)
.-.++....+..++.|+.++ .+.+||+.+.
T Consensus 188 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 188 SLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp BSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred hceEEEEECCEEEEEeccCCCCccceEEEEECCCC
Confidence 11222233556666776554 4778887664
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.05 E-value=5.6 Score=27.29 Aligned_cols=101 Identities=9% Similarity=0.120 Sum_probs=51.2
Q ss_pred EEEEeC--CCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC----CeEEEEeCCCCCcc-eEE
Q psy2113 66 IITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD----NSVKLWDLRSPKVP-LFD 138 (183)
Q Consensus 66 l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d----g~i~vwd~~~~~~~-~~~ 138 (183)
++.|+. ...+.+||..+.+... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-. +..
T Consensus 15 ~~~GG~~~~~~~~~~d~~~~~W~~----~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 15 IALFGGSQPQSCRYFNPKDYSWTD----IRCPFEKRRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp EEEECCSSTTSEEEEETTTTEEEE----CCCCSCCCBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred EEEeCCCCCceEEEecCCCCCEec----CCCCCcccceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 444543 3678889987755321 1111111111222222 55677777754 57889999876521 111
Q ss_pred eccCCCcEEEEEecCCcEEEEecCC------CcEEEEEecCC
Q psy2113 139 MLGHEDKVMCVNWSDYRYIMSGGQD------NSVRVFKTKHQ 174 (183)
Q Consensus 139 ~~~~~~~v~~~~~~~~~~l~~~~~d------g~i~iwd~~~~ 174 (183)
+...... ..+....+..++.|+.+ ..+.+||+.+.
T Consensus 88 ~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~ 128 (306)
T 3ii7_A 88 PPTPRDS-LAACAAEGKIYTSGGSEVGNSALYLFECYDTRTE 128 (306)
T ss_dssp CSSCCBS-CEEEEETTEEEEECCBBTTBSCCCCEEEEETTTT
T ss_pred CCccccc-eeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC
Confidence 1111111 12222355666777665 35888887764
No 320
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=87.01 E-value=5.9 Score=27.44 Aligned_cols=94 Identities=12% Similarity=0.220 Sum_probs=45.8
Q ss_pred CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEeCCCCCcc-eEEeccCCCcE
Q psy2113 73 HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDLRSPKVP-LFDMLGHEDKV 146 (183)
Q Consensus 73 ~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd~~~~~~~-~~~~~~~~~~v 146 (183)
..+.+||+.+..... ...+.........+.+ ++.+++.|+.+ ..+.+||+.+.+-. +.........
T Consensus 175 ~~~~~yd~~~~~W~~----~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~- 246 (318)
T 2woz_A 175 NRVFIYNPKKGDWKD----LAPMKTPRSMFGVAIH---KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSS- 246 (318)
T ss_dssp CCEEEEETTTTEEEE----ECCCSSCCBSCEEEEE---TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBS-
T ss_pred ceEEEEcCCCCEEEE----CCCCCCCcccceEEEE---CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccc-
Confidence 458888887654321 1111111111122222 45677777643 35778999876521 1111111111
Q ss_pred EEEEecCCcEEEEecCC--------------CcEEEEEecCC
Q psy2113 147 MCVNWSDYRYIMSGGQD--------------NSVRVFKTKHQ 174 (183)
Q Consensus 147 ~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~~ 174 (183)
.++....+..++.|+.+ ..+.+||+++.
T Consensus 247 ~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 247 ISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred eEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 22333355666776654 35778887764
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=86.74 E-value=6.8 Score=27.94 Aligned_cols=143 Identities=8% Similarity=0.058 Sum_probs=69.4
Q ss_pred eEEEEEeecCcEEEEEEeccCCCCcccccccCc-cceEEEe---ccCCCeeEEEEccC----CeEEEEeC----C----C
Q psy2113 10 TLGVIFMTVGALLTLTNIEVTSLPSFFQLILQK-TPLITLK---GHKEAISAVQWTAV----DEIITSSW----D----H 73 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~h~~~v~~~~~~~~----~~l~s~~~----d----~ 73 (183)
..+++|.|+|.++.+.. . -.+..+ + ... +.+..+. ........|+++|+ +.|..+.. + .
T Consensus 31 P~~ia~~pdG~l~V~e~-~-g~I~~~--d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTER-P-GRLVLI--S-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp EEEEEEEETTEEEEEET-T-TEEEEE--C-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CeEEEEcCCCeEEEEeC-C-CEEEEE--e-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 45789999998666532 1 111111 0 111 2222221 12346789999986 56544332 3 5
Q ss_pred eEEEEEcCCCC--CccCceeEEEeec-CCcceEEEEEecCCCCEEEEEeC-------------CCeEEEEeCCCCC----
Q psy2113 74 TLKIWDAELGG--MKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASF-------------DNSVKLWDLRSPK---- 133 (183)
Q Consensus 74 ~v~vwd~~~~~--~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~-------------dg~i~vwd~~~~~---- 133 (183)
.|..|+..... ......+...+.. .......+.|.| ++.++++.+. .|.|.-++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 67777765431 1111111111221 111246799999 7777776432 2566666654320
Q ss_pred ---cceEEeccCCCcEEEEEecC-CcEEEE
Q psy2113 134 ---VPLFDMLGHEDKVMCVNWSD-YRYIMS 159 (183)
Q Consensus 134 ---~~~~~~~~~~~~v~~~~~~~-~~~l~~ 159 (183)
.......++. ....++|++ +..|.+
T Consensus 185 pf~~~~i~a~G~r-np~Gla~d~~~g~l~v 213 (354)
T 3a9g_A 185 PFPNSPIWSYGHR-NPQGIDWHRASGVMVA 213 (354)
T ss_dssp SSTTCCEEEECCS-CCCEEEECTTTCCEEE
T ss_pred CCCCCcEEEEccC-CcceEEEeCCCCCEEE
Confidence 0011222333 346788987 444443
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=85.09 E-value=13 Score=29.48 Aligned_cols=112 Identities=10% Similarity=0.107 Sum_probs=61.3
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeec----CCcceEEEEEecCCCCEEEEEeCCCeEEEEe
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSS----HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd 128 (183)
..|.++...+++.|..++.. -+..++..+..... . .... ....|.++...+ ++..|-.|.. +-+..+|
T Consensus 146 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~----~-~~~~~~~~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~ 217 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEG----I-PLPVHSSQSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYF 217 (758)
T ss_dssp SCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEE----E-CCCCCTTCSSCCEEEEEEET-TTTEEEEEEE-EEEEEEE
T ss_pred CeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEE----e-cCCCccccccceeEEEEEEC-CCCEEEEEEC-CCCeEEc
Confidence 35677776667777666654 46677765543210 0 0011 123478887776 4554334443 4577888
Q ss_pred CCCCCcceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 129 LRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 129 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
..+.+. ..........|.++.-.++..|..|+.+ -+.+++..+.
T Consensus 218 ~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 218 PSTGQI-KQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTT 261 (758)
T ss_dssp TTTTEE-EEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTS
T ss_pred CCCCeE-EeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCC
Confidence 876542 1111112335777776655556566644 4777776553
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.09 E-value=9.3 Score=27.15 Aligned_cols=31 Identities=3% Similarity=-0.092 Sum_probs=20.5
Q ss_pred CcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 144 DKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 144 ~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
.....++|..+..+++....+.|...++...
T Consensus 268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 268 FPPGNLAFFRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEEEEEEE
T ss_pred CCCcceEEECCEEEEEECCCCEEEEEEECCC
Confidence 3456777766666666666677777776643
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.76 E-value=8.3 Score=26.32 Aligned_cols=104 Identities=17% Similarity=0.223 Sum_probs=52.5
Q ss_pred CCe-EEEEeCC-----CeEEEEEcCCCC---CccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCC-----CeEEEEe
Q psy2113 63 VDE-IITSSWD-----HTLKIWDAELGG---MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWD 128 (183)
Q Consensus 63 ~~~-l~s~~~d-----~~v~vwd~~~~~---~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d-----g~i~vwd 128 (183)
++. ++.|+.+ ..+.+||..+.. ... ...+.........+.. ++.+++.|+.+ ..+.+||
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~----~~~~p~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d 134 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYS----VAPMNVRRGLAGATTL---GDMIYVSGGFDGSRRHTSMERYD 134 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEE----ECCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEE----CCCCCCCccceeEEEE---CCEEEEEcccCCCcccceEEEEc
Confidence 344 5666654 468899988765 321 1111111111222222 45677777643 3688999
Q ss_pred CCCCCcc-eEEeccCCCcEEEEEecCCcEEEEecCC-----CcEEEEEecCC
Q psy2113 129 LRSPKVP-LFDMLGHEDKVMCVNWSDYRYIMSGGQD-----NSVRVFKTKHQ 174 (183)
Q Consensus 129 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 174 (183)
+.+.+-. +......... .++...++..++.|+.+ ..+.+||+.+.
T Consensus 135 ~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 135 PNIDQWSMLGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp TTTTEEEEEEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred CCCCeEEECCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 8876521 1111111111 22222355666666654 35788887654
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=83.41 E-value=9 Score=26.48 Aligned_cols=62 Identities=16% Similarity=0.259 Sum_probs=32.9
Q ss_pred CCCEEEEEeC------CCeEEEEeCCCCCcceEEecc--CCCcEEEEEecCCcEEEEecCC-----CcEEEEEecCC
Q psy2113 111 DPQLFVSASF------DNSVKLWDLRSPKVPLFDMLG--HEDKVMCVNWSDYRYIMSGGQD-----NSVRVFKTKHQ 174 (183)
Q Consensus 111 ~~~~l~~~~~------dg~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~ 174 (183)
++.+++.|+. -..+.+||+.+.+- ..... ....-.++....+..++.|+.+ ..+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W--~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDW--KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEE--EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEE--EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCC
Confidence 5667777653 23588999987642 11111 1111122233355666666543 24677887665
No 326
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=82.46 E-value=11 Score=26.84 Aligned_cols=116 Identities=7% Similarity=0.039 Sum_probs=68.2
Q ss_pred EEeccCCCeeEEEEcc-CCeEEEEe-CCCeEEEEEcCCCCCccCceeEEEeec----C--CcceEEEEE---ecCCCCEE
Q psy2113 47 TLKGHKEAISAVQWTA-VDEIITSS-WDHTLKIWDAELGGMKKGAIVKSTFSS----H--KEWVQSVRW---SPIDPQLF 115 (183)
Q Consensus 47 ~~~~h~~~v~~~~~~~-~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~~~~~----~--~~~v~~~~~---~p~~~~~l 115 (183)
.+....-.-.+++|.+ .+.|..++ ..++|..||...+.... . .+.+ . ...+..+.+ .| +++++
T Consensus 7 ~~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~----~-~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~ 80 (334)
T 2p9w_A 7 DVKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN----V-VIDGASSNGDGEQQMSGLSLLTHDN-SKRLF 80 (334)
T ss_dssp EECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE----E-CCTTTCCSSCCSEEEEEEEESSSSS-CCEEE
T ss_pred EecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE----E-ecCCccccCCCcceeeEEEEeccCC-CCcEE
Confidence 3444444556889985 57766666 68999999986443211 1 1211 1 124688999 68 67777
Q ss_pred EEEe-------------CCCeEEEEeCC---CCCcceE-Eecc-----------CCCcEEEEEecCC-cEEEEecCC-Cc
Q psy2113 116 VSAS-------------FDNSVKLWDLR---SPKVPLF-DMLG-----------HEDKVMCVNWSDY-RYIMSGGQD-NS 165 (183)
Q Consensus 116 ~~~~-------------~dg~i~vwd~~---~~~~~~~-~~~~-----------~~~~v~~~~~~~~-~~l~~~~~d-g~ 165 (183)
++.. .+..+..+|+. +++.... .+.. -......++..++ +..++++.. +.
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~ 160 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA 160 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe
Confidence 7543 26789999998 6664211 1211 1124778888854 555555555 44
Q ss_pred EEE
Q psy2113 166 VRV 168 (183)
Q Consensus 166 i~i 168 (183)
|..
T Consensus 161 I~r 163 (334)
T 2p9w_A 161 IAR 163 (334)
T ss_dssp EEE
T ss_pred EEE
Confidence 333
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.17 E-value=19 Score=28.54 Aligned_cols=119 Identities=8% Similarity=0.034 Sum_probs=65.0
Q ss_pred CCeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeE--EEee---c-CCcceEEEEEecCCCCEEEEEeCCCeEEE
Q psy2113 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVK--STFS---S-HKEWVQSVRWSPIDPQLFVSASFDNSVKL 126 (183)
Q Consensus 53 ~~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~--~~~~---~-~~~~v~~~~~~p~~~~~l~~~~~dg~i~v 126 (183)
..|.++.-.+++.|..|+..+-+.++|............. ..+. + ....|.++...+ ++++.+.++..+-+..
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWi~~~t~~Gl~~ 497 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDN-EGNVWVLLYNNKGIDK 497 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECT-TSCEEEEETTCSSEEE
T ss_pred ceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcC-CCCEEEEccCCCCcEE
Confidence 3567777667788888887777788885421000000000 1111 1 123588888887 6777763333445777
Q ss_pred EeCCCCCcceEEecc----CCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 127 WDLRSPKVPLFDMLG----HEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 127 wd~~~~~~~~~~~~~----~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+|..+.+. ..+.. ....+.++....+..|..|+.+| |..+|..+..
T Consensus 498 ~d~~~~~~--~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~G-l~~~~~~~~~ 547 (758)
T 3ott_A 498 INPRTREV--TKLFADELTGEKSPNYLLCDEDGLLWVGFHGG-VMRINPKDES 547 (758)
T ss_dssp EETTTTEE--EEECTTTSCGGGCEEEEEECTTSCEEEEETTE-EEEECC--CC
T ss_pred EeCCCCce--EEecCCCcCCCcccceEEECCCCCEEEEecCc-eEEEecCCCc
Confidence 88876542 22221 12356777766555555556554 7778876554
No 328
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=81.00 E-value=22 Score=29.30 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=27.8
Q ss_pred ceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy2113 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV 134 (183)
Q Consensus 101 ~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~ 134 (183)
.+.++...+ +..++++-+.|+++|+|++.++++
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCe
Confidence 466777777 677999999999999999998875
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=81.00 E-value=15 Score=27.53 Aligned_cols=164 Identities=9% Similarity=0.051 Sum_probs=94.8
Q ss_pred eeEEEEEeecCcEEEEEEeccCCCC---cccccccCccceEEEeccCCCeeEEEEccC----CeEEEEeC---CCeEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSLP---SFFQLILQKTPLITLKGHKEAISAVQWTAV----DEIITSSW---DHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~l~s~~~---d~~v~vw 78 (183)
...+..-+++..+++..++..-.-. .........+..+.+++|......+....+ ..+.-+.. .++++|-
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~ 231 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEE
Confidence 3445555666666665443211100 000012234455778888877766665421 12333333 2789999
Q ss_pred EcCCCC-C--ccCceeEEEee---cCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec
Q psy2113 79 DAELGG-M--KKGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152 (183)
Q Consensus 79 d~~~~~-~--~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 152 (183)
++.... . .-.......+. .......++..++ ....+..-..-|.+++||++++.+ +..-+-..++|..-+..
T Consensus 232 Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G~i~lyDleTgt~-i~~nrIs~~~iF~t~~~ 309 (494)
T 1bpo_A 232 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTC-IYMNRISGETIFVTAPH 309 (494)
T ss_dssp ECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEE
T ss_pred EcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCceEEEEeccccee-eeeecccCCceEEeccc
Confidence 986531 1 11111111111 1244567888888 566788888899999999999987 66666666777666555
Q ss_pred -CCcEEEEecCCCcEEEEEecCC
Q psy2113 153 -DYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 153 -~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
+..-++.....|.|.--.+...
T Consensus 310 ~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 310 EATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp TTTTEEEEEETTCEEEEEEECTT
T ss_pred CCCCcEEEEccCceEEEEEEccc
Confidence 3466777778888876665543
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=77.96 E-value=24 Score=27.87 Aligned_cols=111 Identities=11% Similarity=0.132 Sum_probs=56.4
Q ss_pred CCe-EEEEeCCC--eEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeC--C-----CeEEEEeCCCC
Q psy2113 63 VDE-IITSSWDH--TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF--D-----NSVKLWDLRSP 132 (183)
Q Consensus 63 ~~~-l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--d-----g~i~vwd~~~~ 132 (183)
++. ++.|+.++ .+.+||..+........ ............++.+....+.+++.|+. + ..+..||+.+.
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~-~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTP-KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCC-SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccC-CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 444 66666554 68899987755321000 00011111112334555523667777765 2 46889999877
Q ss_pred C------cc-eEEec-cCCCcEEEEEecCCcEEEEecCC--------CcEEEEEecCC
Q psy2113 133 K------VP-LFDML-GHEDKVMCVNWSDYRYIMSGGQD--------NSVRVFKTKHQ 174 (183)
Q Consensus 133 ~------~~-~~~~~-~~~~~v~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~ 174 (183)
. -. +.... ........+.+.++..++.|+.+ ..+.+||+.+.
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 6 10 11111 11112233334336677777643 45888998765
No 331
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=76.15 E-value=23 Score=26.80 Aligned_cols=109 Identities=7% Similarity=0.062 Sum_probs=63.3
Q ss_pred eeEEEEccC--CeEEEE-eCCCeEEEEEcCCCCCccCceeEEEeec----CCcceEEEEE-------ecCCCCEEEEEeC
Q psy2113 55 ISAVQWTAV--DEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSS----HKEWVQSVRW-------SPIDPQLFVSASF 120 (183)
Q Consensus 55 v~~~~~~~~--~~l~s~-~~d~~v~vwd~~~~~~~~~~~~~~~~~~----~~~~v~~~~~-------~p~~~~~l~~~~~ 120 (183)
-..|+|.|. +.|+.+ ...+.|++.|+..+.. ..+.. .......++| ++ ++..++....
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v-------~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~ 212 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML-------SSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAID 212 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE-------EEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEEC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE-------EEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeC
Confidence 457888873 455544 4446788888876553 22221 1235789999 99 6664444443
Q ss_pred CC-------eEEEEeCCC-CCcc----eEEeccCCCcEEEEEecC-C-cEEEEecCCCcEEEEEec
Q psy2113 121 DN-------SVKLWDLRS-PKVP----LFDMLGHEDKVMCVNWSD-Y-RYIMSGGQDNSVRVFKTK 172 (183)
Q Consensus 121 dg-------~i~vwd~~~-~~~~----~~~~~~~~~~v~~~~~~~-~-~~l~~~~~dg~i~iwd~~ 172 (183)
.+ .|.+.+... +... ...+.. ......++.+| + .++++-..++.|..+|+.
T Consensus 213 ~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 213 YDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 32 366666443 1211 012221 12345677786 3 556677778889999997
No 332
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.68 E-value=3.4 Score=33.91 Aligned_cols=31 Identities=6% Similarity=0.154 Sum_probs=25.0
Q ss_pred cEEEEEecCC-cEEEEecCCCcEEEEEecCCC
Q psy2113 145 KVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 145 ~v~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~ 175 (183)
.+.+++..++ .++++-+.|+++|+|++.+++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 4566666654 799999999999999988875
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=74.67 E-value=25 Score=27.41 Aligned_cols=75 Identities=7% Similarity=0.009 Sum_probs=48.5
Q ss_pred CcceEEEEEecCCCCEE-EEEeCCCeEEEEeCCCC-----------CcceEEeccCCCcEEEEEecCCcEE-EEecCCCc
Q psy2113 99 KEWVQSVRWSPIDPQLF-VSASFDNSVKLWDLRSP-----------KVPLFDMLGHEDKVMCVNWSDYRYI-MSGGQDNS 165 (183)
Q Consensus 99 ~~~v~~~~~~p~~~~~l-~~~~~dg~i~vwd~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~l-~~~~~dg~ 165 (183)
....+.+..+| ++.++ ++|-.+.++.++|++.. +..+.....-.-.....+|.+.... .+--.|.+
T Consensus 322 pksPHGv~vsP-DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 322 PKNPHGCNTSS-DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp SSSCCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTE
T ss_pred CCCCcceeeCC-CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecce
Confidence 45567889999 66655 44556889999999831 1111112223345678899865444 44557999
Q ss_pred EEEEEecCC
Q psy2113 166 VRVFKTKHQ 174 (183)
Q Consensus 166 i~iwd~~~~ 174 (183)
|.-|++...
T Consensus 401 vvkWni~~a 409 (638)
T 3sbq_A 401 VVKWNMEEA 409 (638)
T ss_dssp EEEEEHHHH
T ss_pred EEEEeccHH
Confidence 999998753
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=72.32 E-value=27 Score=25.90 Aligned_cols=106 Identities=6% Similarity=0.088 Sum_probs=52.1
Q ss_pred eEEEEEeecCcEEEEEEe--ccCCCCcccccccCccceEEEec------cCCCeeEEEEcc----CCeEEEE-eC-----
Q psy2113 10 TLGVIFMTVGALLTLTNI--EVTSLPSFFQLILQKTPLITLKG------HKEAISAVQWTA----VDEIITS-SW----- 71 (183)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~~~~~~----~~~l~s~-~~----- 71 (183)
..+++|.|+|+++.+..- +++.+.. .......+..+.. ..+.+..|+|+| ++.|..+ +.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~---~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNP---ESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECT---TTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEEC---CCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 357899999998777531 1221110 0111112222221 245677999998 5664433 22
Q ss_pred -------CCeEEEEEcCCCCC--ccCceeEEEeec-CCcceEEEEEecCCCCEEEEEe
Q psy2113 72 -------DHTLKIWDAELGGM--KKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSAS 119 (183)
Q Consensus 72 -------d~~v~vwd~~~~~~--~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~ 119 (183)
...|.-++...... .....+...+.. .......+.|.| ++.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 23555565543211 111111111221 122468999999 777776644
No 335
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=71.43 E-value=26 Score=25.26 Aligned_cols=153 Identities=10% Similarity=0.166 Sum_probs=91.2
Q ss_pred ceeceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
+..+...+..-+|....++.-. +.++ +...+..+..+.- .+.|.--.|.....|+-.+ +..|+-|++.
T Consensus 64 Rrpi~AdsAIMnP~~~ViALrag~~LQiF-------nletK~klks~~~-~e~VvfWkWis~~~L~lVT-~taVyHWs~~ 134 (365)
T 2xzh_A 64 RRPISADSAIMNPASKVIALKAGKTLQIF-------NIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSME 134 (365)
T ss_dssp EEECCCSEEEECSSSSEEEEEETTEEEEE-------ETTTTEEEEEEEC-SSCEEEEEECSSSEEEEEE-SSEEEEEESS
T ss_pred ccccccceeeeCCCccEEEEecCCeEEEe-------chHHhhhhcceec-CCccEEEEecCCCeEEEEc-CCcEEEEccc
Confidence 5566667777888888877754 2222 3445555555543 4578888888777754443 4588999987
Q ss_pred CCCCccCceeEEEeecC----CcceEEEEEecCCCCEE-EEEe------CCCeEEEEeCCCCCcceEEeccCCCcEEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSH----KEWVQSVRWSPIDPQLF-VSAS------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l-~~~~------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 150 (183)
.... +...+..| ...|..-..++ +...+ ++|- -.|.+.+|..+... .+.+.+|...-..+.
T Consensus 135 ~~s~-----P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~ 206 (365)
T 2xzh_A 135 GESQ-----PVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFK 206 (365)
T ss_dssp TTCC-----CEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTE--EEEECCSEEEEEEEC
T ss_pred CCCC-----CceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecccc--cceeeeeeeeeEEEe
Confidence 5322 13333333 35566777777 55543 3332 24688899888654 567788865444443
Q ss_pred ec--CC--cEEEEecC---CCcEEEEEecCC
Q psy2113 151 WS--DY--RYIMSGGQ---DNSVRVFKTKHQ 174 (183)
Q Consensus 151 ~~--~~--~~l~~~~~---dg~i~iwd~~~~ 174 (183)
.. +. ..++-+.. .++++|-++...
T Consensus 207 ~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~ 237 (365)
T 2xzh_A 207 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 237 (365)
T ss_dssp CTTCSSCEEEEEEEEEETTEEEEEEEECSSC
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 33 11 23332222 368999998554
No 336
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=69.44 E-value=29 Score=25.00 Aligned_cols=118 Identities=6% Similarity=0.061 Sum_probs=72.8
Q ss_pred CCeeEEEE--cc-CCe--EEEEeCCCeEEEEEcCCC-CCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEE
Q psy2113 53 EAISAVQW--TA-VDE--IITSSWDHTLKIWDAELG-GMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL 126 (183)
Q Consensus 53 ~~v~~~~~--~~-~~~--l~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~v 126 (183)
..+..+++ ++ .+. ++....+|.+..|++... .........+.+.. .+.+-.+...+ ....|..+-.+.-|..
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd-~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD-EYGRLYIAEEDEAIWK 205 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET-TTTEEEEEETTTEEEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC-CCCeEEEecccceEEE
Confidence 45677777 55 353 667778899999998532 11122233445543 45788888888 6668888888877777
Q ss_pred EeCCCCC----cceEEec-cCC-CcEEEEEec--C-C-cEEEEec-CCCcEEEEEec
Q psy2113 127 WDLRSPK----VPLFDML-GHE-DKVMCVNWS--D-Y-RYIMSGG-QDNSVRVFKTK 172 (183)
Q Consensus 127 wd~~~~~----~~~~~~~-~~~-~~v~~~~~~--~-~-~~l~~~~-~dg~i~iwd~~ 172 (183)
++.+... ..+.... ++- ..+..|+.- + + .+|++++ .+..+.+||.+
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 7755221 1132221 222 367778764 2 2 3565555 57799999986
No 337
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=68.00 E-value=12 Score=29.81 Aligned_cols=30 Identities=17% Similarity=0.416 Sum_probs=24.3
Q ss_pred eEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy2113 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV 134 (183)
Q Consensus 102 v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~ 134 (183)
|.++.+ +..++++-+.|..+|+|+++++.+
T Consensus 224 Is~~~~---~~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 224 ISCKLF---HERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp EEEEEE---TTTEEEEEETTCEEEEEETTTTEE
T ss_pred EEEecc---CCcEEEEEEcCCeEEEEEcCCCce
Confidence 555444 467999999999999999999874
No 338
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.07 E-value=7.7 Score=30.82 Aligned_cols=30 Identities=13% Similarity=0.336 Sum_probs=24.0
Q ss_pred cEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 145 KVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 145 ~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
.|.++.+ ++.++++-+.|.++|+||+++++
T Consensus 223 ~Is~~~~-~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLF-HERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEE-TTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEecc-CCcEEEEEEcCCeEEEEEcCCCc
Confidence 3454444 46899999999999999999875
No 339
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=67.05 E-value=37 Score=25.35 Aligned_cols=57 Identities=12% Similarity=0.049 Sum_probs=34.0
Q ss_pred CCeeEEEEccCC--eEEEEeCCCeEEEEEcCCCCCccCceeEE-Ee-e----cCCcceEEEEEec
Q psy2113 53 EAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKS-TF-S----SHKEWVQSVRWSP 109 (183)
Q Consensus 53 ~~v~~~~~~~~~--~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~-~----~~~~~v~~~~~~p 109 (183)
..-..|+|.|++ +++.+...|.|++++...........-+. .+ . ........|+++|
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P 78 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP 78 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC
Confidence 345689999887 48888899999999754221111100000 01 1 1135678999999
No 340
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=66.58 E-value=33 Score=24.61 Aligned_cols=114 Identities=8% Similarity=0.028 Sum_probs=67.5
Q ss_pred CCeeEEEEcc--CC--eEEEE-eC--CCeEEEEEcCCCCCccCceeEEEeecC-CcceEEEEEecCCCCEEEEEe-----
Q psy2113 53 EAISAVQWTA--VD--EIITS-SW--DHTLKIWDAELGGMKKGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSAS----- 119 (183)
Q Consensus 53 ~~v~~~~~~~--~~--~l~s~-~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~----- 119 (183)
.....+.+.+ ++ +|+.+ .. +..+.+|++...... ......+.+. -...+.+.+.+ ++++.++..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~--~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd 188 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS--LLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFID 188 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE--EEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSS
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE--EEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCC
Confidence 3566777754 34 34444 22 567888887654321 1122233322 24578999999 787777654
Q ss_pred ------------CCCeEEEEeCCCCCcceEEeccCCCcEEEEEecCC-cEE-EEecCCCcEEEEEecC
Q psy2113 120 ------------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI-MSGGQDNSVRVFKTKH 173 (183)
Q Consensus 120 ------------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l-~~~~~dg~i~iwd~~~ 173 (183)
..|.+.-+|. ++ +......-...+.++|+|+ +.+ ++-+..+.|..|++..
T Consensus 189 ~~~~~~e~~~~~~~g~vyr~d~--~~--~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 189 PYLKSWEMHLGLAWSFVTYYSP--ND--VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHHHHHTTCCCEEEEEECT--TC--CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccccchhhccCCccEEEEEEC--Ce--EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 1245555555 33 2333333446799999976 454 4556678899999874
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=64.22 E-value=44 Score=25.21 Aligned_cols=153 Identities=10% Similarity=0.167 Sum_probs=93.1
Q ss_pred ceeceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
+..+...+..-+|....++.-. +.++ +...+..+..+.- .+.|.--.|.....|+-.+ +..|+-|++.
T Consensus 63 rrpi~AdsAIMnP~~~iiALrag~~lQiF-------nle~K~klks~~~-~e~VvfWkWis~~~l~lVT-~taVyHWsi~ 133 (494)
T 1bpo_A 63 RRPISADSAIMNPASKVIALKAGKTLQIF-------NIEMKSKMKAHTM-TDDVTFWKWISLNTVALVT-DNAVYHWSME 133 (494)
T ss_dssp EEECCCSEEEECSSSSCEEEEETTEEEEE-------ETTTTEEEEEEEC-SSCCCEEEEEETTEEEEEC-SSEEEEEESS
T ss_pred ecccccceeeeCCCCcEEEEecCCeEEEE-------chHHhhhhcceec-CCCceEEEecCCCeEEEEc-CCeeEEeccc
Confidence 4566667777888888777754 2222 3445555555543 4567788888777755443 4689999997
Q ss_pred CCCCccCceeEEEeecC----CcceEEEEEecCCCCEEE-EEe------CCCeEEEEeCCCCCcceEEeccCCCcEEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSH----KEWVQSVRWSPIDPQLFV-SAS------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l~-~~~------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 150 (183)
.... +...+..| ...|..-..++ +..+++ +|- -.|.+.+|..+... .+.+.+|...-..+.
T Consensus 134 ~~s~-----P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~--sQ~ieGhaa~F~~~~ 205 (494)
T 1bpo_A 134 GESQ-----PVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFK 205 (494)
T ss_dssp SSCC-----CEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEESTTCC--EEEECCSEEEEEEEE
T ss_pred CCCC-----chhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeeccccc--cchheeeeeeeEEEe
Confidence 5322 13334333 35677777777 555443 332 24788999998765 577888866555554
Q ss_pred ecC--C--cEEEEecC---CCcEEEEEecCC
Q psy2113 151 WSD--Y--RYIMSGGQ---DNSVRVFKTKHQ 174 (183)
Q Consensus 151 ~~~--~--~~l~~~~~---dg~i~iwd~~~~ 174 (183)
... . ..++-+.. .++++|-++...
T Consensus 206 ~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~ 236 (494)
T 1bpo_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (494)
T ss_dssp CTTCSSEEEEEEEEECSTTCCEEEEEECSCC
T ss_pred cCCCCCCceEEEEEEecCCCcEEEEEEcCCC
Confidence 441 1 23333333 378999998654
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.94 E-value=6.6 Score=32.98 Aligned_cols=32 Identities=22% Similarity=0.324 Sum_probs=25.6
Q ss_pred eEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy2113 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV 134 (183)
Q Consensus 102 v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~ 134 (183)
+.+++..+ +..++++-+.|+++|+|++.++.+
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTTTEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCCCCe
Confidence 34455556 677999999999999999998865
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=62.96 E-value=36 Score=23.79 Aligned_cols=50 Identities=8% Similarity=-0.071 Sum_probs=25.1
Q ss_pred CeEEEEeCCCCCcc-eEEeccCCCcEEEEEecCCcEEEEecCC------CcEEEEEe
Q psy2113 122 NSVKLWDLRSPKVP-LFDMLGHEDKVMCVNWSDYRYIMSGGQD------NSVRVFKT 171 (183)
Q Consensus 122 g~i~vwd~~~~~~~-~~~~~~~~~~v~~~~~~~~~~l~~~~~d------g~i~iwd~ 171 (183)
..+.+||+.+.+-. +.........-.++....+..++.|+.+ ..+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 57899999876531 1111111111123333455666666542 34666765
No 344
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=62.14 E-value=39 Score=23.93 Aligned_cols=107 Identities=7% Similarity=-0.077 Sum_probs=52.9
Q ss_pred CCCeeEEEEccC----CeEEEE-eC-------CCeEEEEEcCCCCC--ccCceeEEEee---cCCcceEEEEEecCCCCE
Q psy2113 52 KEAISAVQWTAV----DEIITS-SW-------DHTLKIWDAELGGM--KKGAIVKSTFS---SHKEWVQSVRWSPIDPQL 114 (183)
Q Consensus 52 ~~~v~~~~~~~~----~~l~s~-~~-------d~~v~vwd~~~~~~--~~~~~~~~~~~---~~~~~v~~~~~~p~~~~~ 114 (183)
.+....|+++|+ +.|..+ +. ...|..++...... .....+...+. ........+.|.| ++.+
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~L 143 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYL 143 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcE
Confidence 345689999984 664433 22 23566666653321 11000111111 0111235799999 7766
Q ss_pred EEEEeC-------------CCeEEEEeCCCCC------------cceEEeccCCCcEEEEEecC-CcEEEEe
Q psy2113 115 FVSASF-------------DNSVKLWDLRSPK------------VPLFDMLGHEDKVMCVNWSD-YRYIMSG 160 (183)
Q Consensus 115 l~~~~~-------------dg~i~vwd~~~~~------------~~~~~~~~~~~~v~~~~~~~-~~~l~~~ 160 (183)
+++.+. .|.|.-+|....- .......++ .....++|.+ ...|.++
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 666433 2567777765320 111122233 3467889987 5555544
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.97 E-value=4.2 Score=34.09 Aligned_cols=30 Identities=10% Similarity=0.200 Sum_probs=23.0
Q ss_pred EEEEecC-CcEEEEecCCCcEEEEEecCCCC
Q psy2113 147 MCVNWSD-YRYIMSGGQDNSVRVFKTKHQPK 176 (183)
Q Consensus 147 ~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~ 176 (183)
.+++..+ ..++++-+.|+++|+|++.+++.
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCe
Confidence 3334443 48999999999999999988753
No 346
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=61.61 E-value=42 Score=24.08 Aligned_cols=99 Identities=6% Similarity=0.084 Sum_probs=54.4
Q ss_pred CeeEEEEccCCeEEEEeC----C------------CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEE-E
Q psy2113 54 AISAVQWTAVDEIITSSW----D------------HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLF-V 116 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~----d------------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l-~ 116 (183)
..+.+.+.++|.+..++. | ..-++|.+..++. ..+...-...+.++|+| +++.+ +
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~-------~~~~~~l~~pNGia~sp-Dg~~lYv 237 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDV-------RVVAEGFDFANGINISP-DGKYVYI 237 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCC-------EEEEEEESSEEEEEECT-TSSEEEE
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeE-------EEeecCCcccCcceECC-CCCEEEE
Confidence 568888888888654432 1 1223333333221 12222234568999999 66544 5
Q ss_pred EEeCCCeEEEEeCCCC-Ccc-eEEeccCCCcEEEEEecC--CcEEEEec
Q psy2113 117 SASFDNSVKLWDLRSP-KVP-LFDMLGHEDKVMCVNWSD--YRYIMSGG 161 (183)
Q Consensus 117 ~~~~dg~i~vwd~~~~-~~~-~~~~~~~~~~v~~~~~~~--~~~l~~~~ 161 (183)
+-+..+.|..|++... ... ...+ ......-.++..+ +.+.+++.
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec
Confidence 5556789999998742 211 1122 2245566777775 35555443
No 347
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=61.32 E-value=88 Score=27.70 Aligned_cols=163 Identities=10% Similarity=0.076 Sum_probs=86.8
Q ss_pred eeEEEEEeecCcEEEEEEeccCCC--C-cccccccCccceEEEeccCCCeeEEEEc--cC-CeEEE-EeC---CCeEEEE
Q psy2113 9 LTLGVIFMTVGALLTLTNIEVTSL--P-SFFQLILQKTPLITLKGHKEAISAVQWT--AV-DEIIT-SSW---DHTLKIW 78 (183)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~-~~l~s-~~~---d~~v~vw 78 (183)
...+..-+++..+++..++..-.- . .........+..+.++||......+... +. ..+++ +.. .++++|-
T Consensus 152 QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~ 231 (1630)
T 1xi4_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHII 231 (1630)
T ss_pred eeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEE
Confidence 344555666777776655431110 0 0000112333445667777766555554 11 22322 222 3789998
Q ss_pred EcCCC---CCccCceeEEEeec---CCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcceEEeccCCCcEEEEEec
Q psy2113 79 DAELG---GMKKGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152 (183)
Q Consensus 79 d~~~~---~~~~~~~~~~~~~~---~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 152 (183)
++... ...........+.. ......++..++ ....+...+.-|.++++|+.++.+ +..-+-...+|...+..
T Consensus 232 Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~-i~~~ris~~~iF~~~~~ 309 (1630)
T 1xi4_A 232 EVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTC-IYMNRISGETIFVTAPH 309 (1630)
T ss_pred ecCCCccCCCCCccccccccCCcccccCcceEEEecc-ccCEEEEEecCceEEEEecccchh-hhhccccCCceEEeccC
Confidence 88543 11110011111111 234456777787 555777778889999999999986 54444455566555554
Q ss_pred -CCcEEEEecCCCcEEEEEecC
Q psy2113 153 -DYRYIMSGGQDNSVRVFKTKH 173 (183)
Q Consensus 153 -~~~~l~~~~~dg~i~iwd~~~ 173 (183)
+..-++.....|.|.--.+..
T Consensus 310 ~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 310 EATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred CCCCceEEEcCCceEEEEEEcc
Confidence 335556666777776555544
No 348
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=54.71 E-value=48 Score=22.66 Aligned_cols=107 Identities=11% Similarity=0.059 Sum_probs=54.8
Q ss_pred CeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC
Q psy2113 54 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~ 133 (183)
.|..++......++. . +|.++.|-........ ........|..++... ...+.-. ||.++.|-.....
T Consensus 103 ~v~~ia~G~~hs~al-~-~G~v~~wG~n~~gqlg------~~~~~~~~i~~i~~G~---~~~~~l~-~G~v~~wG~n~~g 170 (282)
T 3qhy_B 103 GVDAIAAGAWASYAL-K-DGKVIAWGDDSDGQTT------VPAEAQSGVTALDGGV---YTALAVK-NGGVIAWGDNYFG 170 (282)
T ss_dssp SEEEEEEETTEEEEE-E-TTEEEEEECCTTSTTS------CCGGGGSSEEEEEECS---SEEEEEE-TTEEEEEECCTTS
T ss_pred CeEEEECcCCEEEEE-e-CCeEEEecCCCCCcCC------CCccCCCCeEEEEccc---CEEEEEE-CCEEEEecCCCCC
Confidence 454554433323333 3 7888888764432211 0011223466665533 2333333 7888888765432
Q ss_pred cceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCCC
Q psy2113 134 VPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 134 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
. +.........|..++......++. .||.|..|-.....
T Consensus 171 q-lg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 171 Q-TTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYK 209 (282)
T ss_dssp T-TSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTS
T ss_pred C-CCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCC
Confidence 2 111111234677777665555555 58999999765543
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=51.66 E-value=87 Score=24.70 Aligned_cols=107 Identities=13% Similarity=0.213 Sum_probs=55.0
Q ss_pred CCe-EEEEeCC------CeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCC--eEEEEeCCCCC
Q psy2113 63 VDE-IITSSWD------HTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN--SVKLWDLRSPK 133 (183)
Q Consensus 63 ~~~-l~s~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg--~i~vwd~~~~~ 133 (183)
++. ++.|+.+ ..+.+||..+..... ...+. ....-.+.+... ++.+++.|+.++ .+.+||+.+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~----~~~~p-~~R~~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM----IKSLS-HTRFRHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEI 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEE----CCCCS-BCCBSCEEEECT-TSCEEEECCBCSSCSEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEE----CCCCC-CCcccceEEEEc-CCEEEEECCCCCCCCEEEEECCCCc
Confidence 555 5566543 357788887654321 11111 111122333323 567788877654 68999998764
Q ss_pred cceEE----eccCCCcEEEEEecC--CcEEEEecC--C-----CcEEEEEecCCC
Q psy2113 134 VPLFD----MLGHEDKVMCVNWSD--YRYIMSGGQ--D-----NSVRVFKTKHQP 175 (183)
Q Consensus 134 ~~~~~----~~~~~~~v~~~~~~~--~~~l~~~~~--d-----g~i~iwd~~~~~ 175 (183)
-.... ..........+.+.. +..++.|+. + ..+.+||+.+..
T Consensus 525 W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 525 FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 21111 111111223344442 456666665 2 358899988776
No 350
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=49.22 E-value=20 Score=23.07 Aligned_cols=35 Identities=6% Similarity=0.227 Sum_probs=25.2
Q ss_pred CCcEEEEEecCC--cEEEEecCCCcEEEEEecCCCCC
Q psy2113 143 EDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 143 ~~~v~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
..-+.++.|.++ ..+++.+.+|++.+||++-++-.
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 334556667655 67777788999999998876543
No 351
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=48.21 E-value=98 Score=24.28 Aligned_cols=77 Identities=8% Similarity=0.108 Sum_probs=50.6
Q ss_pred CCeeEEEEccCCe--EEEEeCCCeEEEEEcCC------CCC-ccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCe
Q psy2113 53 EAISAVQWTAVDE--IITSSWDHTLKIWDAEL------GGM-KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS 123 (183)
Q Consensus 53 ~~v~~~~~~~~~~--l~s~~~d~~v~vwd~~~------~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~ 123 (183)
.+-.++..+|+|+ +++|-.+.++.++|++. .+. ........... -.-.....+|.+ +++...|---|..
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecce
Confidence 4456788889988 45666789999999873 111 11122222222 233467788998 7755566667999
Q ss_pred EEEEeCCC
Q psy2113 124 VKLWDLRS 131 (183)
Q Consensus 124 i~vwd~~~ 131 (183)
|.-|++..
T Consensus 401 vvkWni~~ 408 (638)
T 3sbq_A 401 VVKWNMEE 408 (638)
T ss_dssp EEEEEHHH
T ss_pred EEEEeccH
Confidence 99999974
No 352
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=47.51 E-value=55 Score=23.34 Aligned_cols=61 Identities=8% Similarity=0.184 Sum_probs=36.6
Q ss_pred CEEEEEeCCCeEEEEeCCCCCcceEEeccC-CCcEEEEEec---CCcEEE-Ee-cCCCcEEEEEecCC
Q psy2113 113 QLFVSASFDNSVKLWDLRSPKVPLFDMLGH-EDKVMCVNWS---DYRYIM-SG-GQDNSVRVFKTKHQ 174 (183)
Q Consensus 113 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~---~~~~l~-~~-~~dg~i~iwd~~~~ 174 (183)
..++.++.||.|.-.|..+++. .-.+... ..++....-. .+..++ .. ..||.|..+|..++
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~-~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHI-IWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEE-EEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEEeCCCeEEEEECCCCcE-EEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 4788888999999999988875 3333332 1222221111 122333 33 57999988887665
No 353
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=47.16 E-value=70 Score=22.29 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=15.7
Q ss_pred CCCEEEEEeC-C---------CeEEEEeCCCCC
Q psy2113 111 DPQLFVSASF-D---------NSVKLWDLRSPK 133 (183)
Q Consensus 111 ~~~~l~~~~~-d---------g~i~vwd~~~~~ 133 (183)
++.+++.|+. + ..+.+||+.+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 4567777665 2 468899998764
No 354
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=45.22 E-value=1.7e+02 Score=26.11 Aligned_cols=153 Identities=10% Similarity=0.181 Sum_probs=80.8
Q ss_pred ceeceeEEEEEeecCcEEEEEE---eccCCCCcccccccCccceEEEeccCCCeeEEEEccCCeEEEEeCCCeEEEEEcC
Q psy2113 5 KFGILTLGVIFMTVGALLTLTN---IEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 81 (183)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~~~d~~v~vwd~~ 81 (183)
+..+...+..-+|....++.-. +.++ +...+..+..+. ...+|.--.|.....|+-.+ +..|+-|++.
T Consensus 63 rrpi~AdsAIMnP~~~iiALrag~~lQiF-------nl~~k~klks~~-~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~ 133 (1630)
T 1xi4_A 63 RRPISADSAIMNPASKVIALKAGKTLQIF-------NIEMKSKMKAHT-MTDDVTFWKWISLNTVALVT-DNAVYHWSME 133 (1630)
T ss_pred cccccchhhccCCCcceEEEecCCeEEEe-------ehHHhhhhcccc-cCCCceEEEecCCCeeEEEc-CCeEEEeccC
Confidence 3445555556666666665543 2222 223333344433 24467777887666644333 4588999996
Q ss_pred CCCCccCceeEEEeecC----CcceEEEEEecCCCCEE-EEEe------CCCeEEEEeCCCCCcceEEeccCCCcEEEEE
Q psy2113 82 LGGMKKGAIVKSTFSSH----KEWVQSVRWSPIDPQLF-VSAS------FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150 (183)
Q Consensus 82 ~~~~~~~~~~~~~~~~~----~~~v~~~~~~p~~~~~l-~~~~------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 150 (183)
..... ...+..| ...|..-..++ +..++ ++|- -.|.+.+|.++... .+.+.||...-..+.
T Consensus 134 ~~s~P-----~k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~~--sQ~iegha~~F~~~~ 205 (1630)
T 1xi4_A 134 GESQP-----VKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV--SQPIEGHAASFAQFK 205 (1630)
T ss_pred CCCcc-----HHHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeeccccc--chhhhHhHhhhheec
Confidence 52221 1122222 45566666677 44443 3332 35788999887654 355666655443333
Q ss_pred ec--CC-cEEEE-ec---CCCcEEEEEecCC
Q psy2113 151 WS--DY-RYIMS-GG---QDNSVRVFKTKHQ 174 (183)
Q Consensus 151 ~~--~~-~~l~~-~~---~dg~i~iwd~~~~ 174 (183)
.. +. ..+++ +. ..++++|-++...
T Consensus 206 ~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~ 236 (1630)
T 1xi4_A 206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTP 236 (1630)
T ss_pred cCCCCCCceEEEEEEecCCCceEEEEecCCC
Confidence 32 11 22222 11 1368999998654
No 355
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=36.67 E-value=1.1e+02 Score=21.76 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=46.3
Q ss_pred CcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCCcc-eEEe----ccCCCcEEEEEecCC----cEEEEe---cCCCcE
Q psy2113 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP-LFDM----LGHEDKVMCVNWSDY----RYIMSG---GQDNSV 166 (183)
Q Consensus 99 ~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~~~-~~~~----~~~~~~v~~~~~~~~----~~l~~~---~~dg~i 166 (183)
-.....++|.| +++++++-...|.|++++..+++.. +..+ .........|+++|+ ..|+.. ..++.|
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 44578999999 7887777655899999987655421 1111 122456789999973 444432 234555
Q ss_pred EEEEecC
Q psy2113 167 RVFKTKH 173 (183)
Q Consensus 167 ~iwd~~~ 173 (183)
.-|.+..
T Consensus 110 ~R~~~~~ 116 (347)
T 3das_A 110 VRMLYDE 116 (347)
T ss_dssp EEEEBCT
T ss_pred EEEEeCC
Confidence 5566554
No 356
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=36.44 E-value=1.3e+02 Score=23.00 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=40.4
Q ss_pred CeeEEEEcc-CCe--EEEEeCCCeEEEEEcCCCCCccCceeEEEe--ecCCcceE-EEEEecCCCCEEEEEeCCCeEEE
Q psy2113 54 AISAVQWTA-VDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTF--SSHKEWVQ-SVRWSPIDPQLFVSASFDNSVKL 126 (183)
Q Consensus 54 ~v~~~~~~~-~~~--l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~--~~~~~~v~-~~~~~p~~~~~l~~~~~dg~i~v 126 (183)
.+++|+... .+. +..|..+|.|.-..+..... .......+ .....+|. .+.+++ +...|..++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~--~~~~~e~~~v~~~~~pv~~~l~~~~-~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPH--GGVQYEMVSVFKDGSPILRDMAFSI-NQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTT--EEEEEEEEECCTTCCCCCSCCEECT-TSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCc--cceeEEEEEeecCCCccccceEEcc-CCCeEEEEecccccee
Confidence 466666553 233 67888999887555432211 00112222 22345775 888999 7778888876665554
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=32.97 E-value=1.7e+02 Score=22.75 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=35.2
Q ss_pred eEEEEEecCCCCEEEEEeCC------------CeEEEEeCCCCCcceEEecc-CCCcEEEEEecCC-cEEEE
Q psy2113 102 VQSVRWSPIDPQLFVSASFD------------NSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 102 v~~~~~~p~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~l~~ 159 (183)
.-.|.|+| .+++++.-..+ ..+.+.+..+++. ...+.+ ....++.+.|+|+ +.|+.
T Consensus 478 PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEE
Confidence 45689999 78777754322 2456666666664 333333 4578999999976 55544
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=31.34 E-value=1.4e+02 Score=21.09 Aligned_cols=121 Identities=10% Similarity=0.119 Sum_probs=69.6
Q ss_pred CCCeeEEEEc----cCCeEEEEeCCCeEEEEEcCCCCCcc-CceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEE
Q psy2113 52 KEAISAVQWT----AVDEIITSSWDHTLKIWDAELGGMKK-GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL 126 (183)
Q Consensus 52 ~~~v~~~~~~----~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~v 126 (183)
.+.|..+... ++..++..+.+|.++.-.+..-.... .......+.. ...+..+.... ....++..+..|.+..
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~r 171 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIR 171 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEE
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEE
Confidence 3445554333 24569999999999988865422211 1111112333 34455554444 4456777888998887
Q ss_pred EeCC--CCCcc------e--EEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCC
Q psy2113 127 WDLR--SPKVP------L--FDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQP 175 (183)
Q Consensus 127 wd~~--~~~~~------~--~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~ 175 (183)
+... .-... + ..+ ...+.|..+... ++..++..+..|.++.-.+..-.
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L-~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~ 230 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRF-NIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYP 230 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCC-CTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSC
T ss_pred EECcccccCcCCcCCCCeeeecC-CCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHcc
Confidence 7766 22110 1 111 224556666555 45788899999999888766543
No 359
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=30.72 E-value=1.3e+02 Score=20.56 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=70.8
Q ss_pred CCCeeEEEEc--cCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeC
Q psy2113 52 KEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129 (183)
Q Consensus 52 ~~~v~~~~~~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~ 129 (183)
.+.|..+... ++..++..+.+|.++...+..-...........+.. ...+..+.... +...++..+.+|.+..+..
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~-~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSV-DETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECC-SSCEEEEEETTSEEEEEEG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeC-CCCEEEEEECCCEEEEEEh
Confidence 4556555432 235588999999999988755321111111112332 34455555544 4557778888998887765
Q ss_pred CCCCc--------ceEEeccCCCcEEEEEec-CCcEEEEecCCCcEEEEEecCCCCC
Q psy2113 130 RSPKV--------PLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177 (183)
Q Consensus 130 ~~~~~--------~~~~~~~~~~~v~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 177 (183)
..-.. ....+. ..+.|..+... ++..++..+..|.++...+..-...
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~ 200 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKT 200 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCC
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccC
Confidence 42111 011122 23455555443 5578888899999998887665443
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=27.21 E-value=2.2e+02 Score=22.21 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=31.0
Q ss_pred CeeEEEEccCCeEEEEeCC-------------CeEEEEEcCCCCCccCceeEEEeec-CCcceEEEEEecCCCCEEEE
Q psy2113 54 AISAVQWTAVDEIITSSWD-------------HTLKIWDAELGGMKKGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS 117 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d-------------~~v~vwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~ 117 (183)
.-..|.|.++|.|..+... ..+..++..+++. ...+.. ....++.++|+| +++.|..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel------~~fl~~P~~aEpnGiafSP-D~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI------RRFMVGPIGCEVTGISFSP-DQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE------EEEEECCTTCEEEEEEECT-TSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE------EEEEeCCCCccccCCEECC-CCCEEEE
Confidence 3456778877765443211 1455555444442 223332 245689999999 5554443
No 361
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=22.39 E-value=1.9e+02 Score=19.67 Aligned_cols=106 Identities=10% Similarity=0.053 Sum_probs=56.2
Q ss_pred CeeEEEEccCCeEEEEeCCCeEEEEEcCCCCCccCceeEEEeecCCcceEEEEEecCCCCEEEEEeCCCeEEEEeCCCCC
Q psy2113 54 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133 (183)
Q Consensus 54 ~v~~~~~~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~i~vwd~~~~~ 133 (183)
.|..++......++. . |+.++.|-......... .......|..++... ...+.- .||.++.|-....-
T Consensus 142 ~i~~i~~G~~~~~~l-~-~G~v~~wG~n~~gqlg~------p~~~~~~v~~i~~G~---~hs~al-~~G~v~~wG~n~~g 209 (282)
T 3qhy_B 142 GVTALDGGVYTALAV-K-NGGVIAWGDNYFGQTTV------PAEAQSGVDDVAGGI---FHSLAL-KDGKVIAWGDNRYK 209 (282)
T ss_dssp SEEEEEECSSEEEEE-E-TTEEEEEECCTTSTTSC------CGGGGSSEEEEEECS---SEEEEE-ETTEEEEEECCTTS
T ss_pred CeEEEEcccCEEEEE-E-CCEEEEecCCCCCCCCC------ceecCCCeEEEEecC---CEEEEE-ECCeEEEEECCCCC
Confidence 455555433333333 3 78888887654332110 001134577776643 233333 59999999776533
Q ss_pred cceEEeccCCCcEEEEEecCCcEEEEecCCCcEEEEEecCC
Q psy2113 134 VPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQ 174 (183)
Q Consensus 134 ~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 174 (183)
. +.........|..++-.....++.. ||.|..|-....
T Consensus 210 q-lg~p~~~~~~v~~i~~G~~h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 210 Q-TTVPTEALSGVSAIASGEWYSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp T-TCCCGGGGSSCCEEEECSSCEEEEE--TTEEEEESTTCC
T ss_pred C-CCCCcccCCCceEEEcCCCEEEEEE--CCEEEEecCCCC
Confidence 2 1111122245677766554444444 999999965543
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=20.79 E-value=3.1e+02 Score=21.48 Aligned_cols=58 Identities=12% Similarity=0.124 Sum_probs=36.1
Q ss_pred cceEEEEEecCCCCEEEEEeC------------CCeEEEEeCCCCCcceEEecc-CCCcEEEEEecCC-cEEEE
Q psy2113 100 EWVQSVRWSPIDPQLFVSASF------------DNSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWSDY-RYIMS 159 (183)
Q Consensus 100 ~~v~~~~~~p~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~l~~ 159 (183)
.....|.|.+ ++.+.+.... ...+..++..+++. ...+.. ....++.++|+|+ +.|+.
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEE
Confidence 3467899999 7877773321 12577777777663 223332 3467899999976 55544
Done!