Your job contains 1 sequence.
>psy2113
MSTNKFGILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQW
TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF
DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPKSGQK
SKA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2113
(183 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|B0W517 - symbol:CPIJ001500 "Ribosome biogenesis... 329 1.0e-29 1
UNIPROTKB|Q17BB0 - symbol:AAEL005041 "Ribosome biogenesis... 324 3.4e-29 1
UNIPROTKB|Q7QJ33 - symbol:AGAP007244 "Ribosome biogenesis... 315 3.1e-28 1
UNIPROTKB|B4KKN1 - symbol:GI17814 "Ribosome biogenesis pr... 303 5.7e-27 1
UNIPROTKB|B3MJV8 - symbol:GF14067 "Ribosome biogenesis pr... 302 7.3e-27 1
UNIPROTKB|Q29KQ0 - symbol:GA19813 "Ribosome biogenesis pr... 302 7.3e-27 1
UNIPROTKB|B4Q9T6 - symbol:GD22226 "Ribosome biogenesis pr... 302 7.3e-27 1
UNIPROTKB|B4JPT9 - symbol:GH13339 "Ribosome biogenesis pr... 300 1.2e-26 1
UNIPROTKB|B4GT01 - symbol:GL26386 "Ribosome biogenesis pr... 299 1.5e-26 1
UNIPROTKB|B4HWV6 - symbol:GM11446 "Ribosome biogenesis pr... 299 1.5e-26 1
UNIPROTKB|B4LS78 - symbol:GJ17641 "Ribosome biogenesis pr... 296 3.2e-26 1
UNIPROTKB|B4MU54 - symbol:GK23981 "Ribosome biogenesis pr... 296 3.2e-26 1
FB|FBgn0032298 - symbol:CG6724 species:7227 "Drosophila m... 295 4.0e-26 1
UNIPROTKB|B3N534 - symbol:GG10358 "Ribosome biogenesis pr... 295 4.0e-26 1
UNIPROTKB|B4P116 - symbol:GE13328 "Ribosome biogenesis pr... 295 4.0e-26 1
RGD|735072 - symbol:Wdr12 "WD repeat domain 12" species:1... 261 3.4e-22 1
UNIPROTKB|Q0VC24 - symbol:WDR12 "Ribosome biogenesis prot... 261 3.4e-22 1
UNIPROTKB|A8QB65 - symbol:Bm1_47965 "Ribosome biogenesis ... 261 3.8e-22 1
UNIPROTKB|Q9GZL7 - symbol:WDR12 "Ribosome biogenesis prot... 260 4.3e-22 1
UNIPROTKB|Q5REE6 - symbol:WDR12 "Ribosome biogenesis prot... 260 4.3e-22 1
UNIPROTKB|F1P2Y8 - symbol:WDR12 "Uncharacterized protein"... 259 4.7e-22 1
MGI|MGI:1927241 - symbol:Wdr12 "WD repeat domain 12" spec... 258 7.4e-22 1
UNIPROTKB|E2RNA4 - symbol:WDR12 "Uncharacterized protein"... 257 9.6e-22 1
UNIPROTKB|F1SHE8 - symbol:WDR12 "Uncharacterized protein"... 255 1.6e-21 1
UNIPROTKB|B5DG67 - symbol:wdr12 "Ribosome biogenesis prot... 253 2.7e-21 1
UNIPROTKB|Q5BJ90 - symbol:wdr12 "Ribosome biogenesis prot... 253 2.7e-21 1
ZFIN|ZDB-GENE-030131-371 - symbol:wdr12 "WD repeat domain... 252 3.5e-21 1
UNIPROTKB|A8XL02 - symbol:tag-345 "Ribosome biogenesis pr... 235 3.5e-19 1
WB|WBGene00018893 - symbol:tag-345 species:6239 "Caenorha... 229 1.5e-18 1
UNIPROTKB|P91343 - symbol:tag-345 "Ribosome biogenesis pr... 229 1.5e-18 1
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 218 3.8e-17 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 203 4.0e-16 1
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 206 7.3e-16 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 202 1.5e-15 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 200 3.5e-15 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 192 4.7e-15 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 192 7.3e-15 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 192 7.3e-15 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 192 7.3e-15 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 192 7.3e-15 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 192 7.3e-15 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 192 7.3e-15 1
TAIR|locus:2180952 - symbol:AT5G15550 "AT5G15550" species... 153 8.5e-15 2
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 190 9.4e-15 1
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 195 1.1e-14 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 193 1.4e-14 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 193 1.7e-14 1
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 192 2.2e-14 1
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 192 2.2e-14 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 192 2.3e-14 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 185 4.8e-14 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 184 7.8e-14 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 181 1.1e-13 1
DICTYBASE|DDB_G0295761 - symbol:nle1 "putative notchless"... 186 1.1e-13 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 180 1.4e-13 1
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 184 1.6e-13 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 179 1.8e-13 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 179 1.8e-13 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 179 1.9e-13 1
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 182 2.9e-13 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 189 3.4e-13 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 176 4.2e-13 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 175 4.9e-13 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 175 5.4e-13 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 179 8.0e-13 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 172 1.2e-12 1
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 176 1.4e-12 1
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 173 1.7e-12 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 175 1.7e-12 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 175 1.7e-12 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 175 1.7e-12 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 175 1.7e-12 1
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 175 1.7e-12 1
DICTYBASE|DDB_G0287817 - symbol:wdr24 "WD40 repeat-contai... 179 1.9e-12 1
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 174 2.3e-12 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 173 3.0e-12 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 173 3.0e-12 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 173 3.0e-12 1
UNIPROTKB|P93397 - symbol:P93397 "Guanine nucleotide-bind... 170 3.1e-12 1
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 174 3.4e-12 1
DICTYBASE|DDB_G0288425 - symbol:gemin5 "component of gems... 165 4.9e-12 2
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 171 5.0e-12 1
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 170 6.1e-12 1
UNIPROTKB|C3UJQ7 - symbol:TBL1Y "Transducin (Beta)-like 1... 170 6.3e-12 1
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 169 6.5e-12 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 168 8.9e-12 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 167 9.5e-12 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 168 1.2e-11 1
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 167 1.3e-11 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 165 1.6e-11 1
ZFIN|ZDB-GENE-040426-1192 - symbol:tbl1xr1 "transducin (b... 166 1.6e-11 1
WB|WBGene00021074 - symbol:W07E6.2 species:6239 "Caenorha... 165 1.8e-11 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 160 2.2e-11 1
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 166 2.2e-11 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 165 2.6e-11 1
GENEDB_PFALCIPARUM|PF08_0019 - symbol:PF08_0019 "receptor... 160 2.6e-11 1
UNIPROTKB|Q8IBA0 - symbol:PfRACK "Receptor for activated ... 160 2.6e-11 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 162 3.4e-11 1
DICTYBASE|DDB_G0278285 - symbol:copB2 "coatomer protein c... 167 3.5e-11 1
CGD|CAL0003838 - symbol:orf19.7235 species:5476 "Candida ... 166 3.8e-11 1
WARNING: Descriptions of 881 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 59/107 (55%), Positives = 82/107 (76%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
IIT+S D L+++D + +G +VK+T+ H +WVQSVRWS + LFVS ++DN VK
Sbjct: 315 IITASPDKNLRLYDPK---SNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVK 371
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK P+F+++GHEDKV+ +WS+ R+I+SGG DNSVRVFK+K
Sbjct: 372 LWDYRSPKAPIFELIGHEDKVLACDWSNPRFILSGGSDNSVRVFKSK 418
Score = 224 (83.9 bits), Expect = 4.9e-18, P = 4.9e-18
Identities = 54/141 (38%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TPL+TL GH+E IS VQW + ++TSSWDHT+KIWD L G +KS S +K +
Sbjct: 250 RTPLMTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALNG------IKSEISGNKSF 303
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD--MLGHEDKVMCVNWS---DYRY 156
+ +S ++ L ++AS D +++L+D +S + L LGH V V WS +Y +
Sbjct: 304 FD-LSYSKLNG-LIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLF 361
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN V+++ + PK+
Sbjct: 362 V-SGAYDNHVKLWDYR-SPKA 380
Score = 115 (45.5 bits), Expect = 0.00010, P = 0.00010
Identities = 37/149 (24%), Positives = 72/149 (48%)
Query: 49 KGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL---GGMKKGAIVKS----------- 93
KGH+ + + + ++ T SWD LKIW ++ GG + + K
Sbjct: 193 KGHERGVDCIAANGSKTKMATGSWDTMLKIWSTDVRSGGGDSEPSTSKRQKLDQGSARTP 252
Query: 94 --TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
T + H+E + V+W ID V++S+D+++K+WDL + ++ G++ +++
Sbjct: 253 LMTLAGHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALNGIKS-EISGNKS-FFDLSY 308
Query: 152 SDYR-YIMSGGQDNSVRVFKTKHQPKSGQ 179
S I++ D ++R++ PKS Q
Sbjct: 309 SKLNGLIITASPDKNLRLY----DPKSNQ 333
Score = 110 (43.8 bits), Expect = 0.00044, P = 0.00044
Identities = 40/129 (31%), Positives = 64/129 (49%)
Query: 51 HKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSP 109
H + +SAV+ A D I+T +D+TL +W KG K T H V+ V W
Sbjct: 107 HDDWVSAVE--ARDNWILTGCYDNTLNLWTT------KGKH-KLTIPGHIAPVKGVTWIS 157
Query: 110 IDPQ--LFVSASFDNSVKLWD--LRSPKVPLFDML-GHEDKVMCV--NWSDYRYIMSGGQ 162
+D + +F SAS D +V LW+ + + V + GHE V C+ N S + + +G
Sbjct: 158 LDEEKGVFASASQDQTVMLWEWNVAANSVECVQVCKGHERGVDCIAANGSKTK-MATGSW 216
Query: 163 DNSVRVFKT 171
D ++++ T
Sbjct: 217 DTMLKIWST 225
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 61/124 (49%), Positives = 89/124 (71%)
Query: 50 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK + ++ ++ II +S D L+++D + +G IVK+T+ H +WVQSVRWS
Sbjct: 301 GHKSFFD-LSYSHLNGLIIAASPDKNLRLYDPK---SNQGTIVKNTYLGHTQWVQSVRWS 356
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRV 168
+ LFVS ++DN VKLWD RSPK P+F+++GHEDKV+ +WS+ ++I+SGG DNSVRV
Sbjct: 357 TTNEYLFVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWSNPKFILSGGSDNSVRV 416
Query: 169 FKTK 172
FK+K
Sbjct: 417 FKSK 420
Score = 221 (82.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 52/141 (36%), Positives = 83/141 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP++TL GH+E IS VQW + ++TSSWDHT+KIWD L G +KS HK +
Sbjct: 252 RTPVLTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSG------IKSEICGHKSF 305
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD--MLGHEDKVMCVNWS---DYRY 156
+ +S ++ L ++AS D +++L+D +S + + LGH V V WS +Y +
Sbjct: 306 FD-LSYSHLNG-LIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLF 363
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN V+++ + PK+
Sbjct: 364 V-SGAYDNHVKLWDYR-SPKA 382
Score = 118 (46.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/129 (32%), Positives = 65/129 (50%)
Query: 51 HKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSP 109
H + +SAV+ A D I+T +D+TL IW KG K T H V+ V W
Sbjct: 110 HDDWVSAVE--AKDNWILTGCYDNTLNIWTT------KGKH-KLTIPGHIAPVKGVTWIS 160
Query: 110 IDPQ--LFVSASFDNSVKLWD--LRSPKVPLFDML-GHEDKVMCV--NWSDYRYIMSGGQ 162
+D + +F SAS D +V LW+ +++ V + GHE V C+ N S R + +G
Sbjct: 161 LDEEKGVFASASQDQTVMLWEWNVKANSVECVQVCKGHERGVDCIAANRSKTR-MATGSW 219
Query: 163 DNSVRVFKT 171
D ++++ T
Sbjct: 220 DTMLKIWST 228
Score = 118 (46.6 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/148 (25%), Positives = 70/148 (47%)
Query: 49 KGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL--GGMKKGAIVKS------------ 93
KGH+ + + + + T SWD LKIW ++ G + + K
Sbjct: 196 KGHERGVDCIAANRSKTRMATGSWDTMLKIWSTDVRNDGDSQPSTSKRQKLDTEKARTPV 255
Query: 94 -TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
T + H+E + V+W ID V++S+D+++K+WDL + ++ GH+ +++S
Sbjct: 256 LTLAGHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALSGIKS-EICGHKS-FFDLSYS 311
Query: 153 DYR-YIMSGGQDNSVRVFKTKHQPKSGQ 179
I++ D ++R++ PKS Q
Sbjct: 312 HLNGLIIAASPDKNLRLY----DPKSNQ 335
>UNIPROTKB|Q7QJ33 [details] [associations]
symbol:AGAP007244 "Ribosome biogenesis protein WDR12
homolog" species:7165 "Anopheles gambiae" [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAAB01008807 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_308556.3
ProteinModelPortal:Q7QJ33 STRING:Q7QJ33
EnsemblMetazoa:AGAP007244-RA GeneID:1269902
KEGG:aga:AgaP_AGAP007244 VectorBase:AGAP007244 CTD:1269902
PhylomeDB:Q7QJ33 Uniprot:Q7QJ33
Length = 428
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 56/107 (52%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
IIT+S D L+++D K G VK+T+ H +WVQ+ RWS + LFVS ++DN VK
Sbjct: 316 IITASPDKNLRLYDPR---SKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVK 372
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK P+F+++GHEDKV+ +WS+ +YI+SGG DN+VRVFK++
Sbjct: 373 LWDYRSPKAPIFELIGHEDKVLACDWSNPKYILSGGSDNAVRVFKSR 419
Score = 213 (80.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 49/141 (34%), Positives = 81/141 (57%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP++TL GH+E +S VQW I T SWDHT+K+WD +GG +K+ F+ +K +
Sbjct: 251 RTPVVTLAGHREFVSGVQWIDNTTIATCSWDHTIKLWDLSMGG------IKTEFTGNKSF 304
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD--MLGHEDKVMCVNWS---DYRY 156
+ +SP++ + ++AS D +++L+D RS LGH V WS +Y +
Sbjct: 305 FD-LSYSPLNGMI-ITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLF 362
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN V+++ + PK+
Sbjct: 363 V-SGAYDNRVKLWDYR-SPKA 381
Score = 123 (48.4 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 51 HKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSP 109
H + +SAVQ A D I+T ++D+T+ +W+ KG K T H V+ V W
Sbjct: 110 HDDWVSAVQ--AKDGWILTGTYDNTVNLWNT------KGKH-KLTIPGHVAAVKGVAWIS 160
Query: 110 IDPQ--LFVSASFDNSVKLWD--LRSPKVPLFDML-GHEDKVMCVNWSDYRYIM-SGGQD 163
++ Q +F SAS D ++ +W+ + + + GHE V C+ + + M SG D
Sbjct: 161 LNEQTGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMD 220
Query: 164 NSVRVFKTKHQPKSGQKS 181
++++ T+ Q G+ S
Sbjct: 221 TMLKIWSTELQADKGEPS 238
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 55/117 (47%), Positives = 82/117 (70%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++DA +G++V+ST+ H WVQ+V WS + LFVS ++DN K
Sbjct: 306 IVTASADKNLRLYDARTN---QGSVVRSTYLGHNAWVQTVMWSITEEFLFVSGAYDNQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTKHQPKSGQKSK 182
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK+ ++K
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVFKSSKATVENMETK 419
Score = 207 (77.9 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP +TL+GH+E+ISAVQW + ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 241 RTPRMTLQGHRESISAVQWMDNNTLLTGSWDHTLKVWDLNLEG------IKTEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ S ++ L V+AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 294 IFDASHSKLN-NLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVMWSITEEFLF 352
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 353 V-SGAYDNQNKLWDCR-SPKA 371
Score = 133 (51.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 46 ITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+T+ GH I AV W ++D +++S D T +W + + S H+
Sbjct: 138 LTIPGHTAPIKAVDWISLDNENGRFVSTSQDQTAMMWQWNIASNAVECV--SVCKGHERG 195
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLW--DLRSP-------------KVPLFDMLGHEDKV 146
V SV SP D Q F + S+D +K+W +L + P + GH + +
Sbjct: 196 VDSVCVSP-DAQRFATGSWDTMLKIWSAELEDAGESTAKRAKESGVRTPRMTLQGHRESI 254
Query: 147 MCVNWSDYRYIMSGGQDNSVRVF 169
V W D +++G D++++V+
Sbjct: 255 SAVQWMDNNTLLTGSWDHTLKVW 277
Score = 117 (46.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 29/92 (31%), Positives = 48/92 (52%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAEL--GG------MKKGAI--VKSTFSS 97
KGH+ + +V + T SWD LKIW AEL G K+ + + T
Sbjct: 190 KGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAELEDAGESTAKRAKESGVRTPRMTLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 129
H+E + +V+W +D ++ S+D+++K+WDL
Sbjct: 250 HRESISAVQW--MDNNTLLTGSWDHTLKVWDL 279
>UNIPROTKB|B3MJV8 [details] [associations]
symbol:GF14067 "Ribosome biogenesis protein WDR12 homolog"
species:7217 "Drosophila ananassae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH902620 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001963192.1 ProteinModelPortal:B3MJV8 STRING:B3MJV8
EnsemblMetazoa:FBtr0118767 GeneID:6496895 KEGG:dan:Dana_GF14067
FlyBase:FBgn0091094 InParanoid:B3MJV8 Uniprot:B3MJV8
Length = 419
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 53/107 (49%), Positives = 80/107 (74%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++DA +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 306 IVTASADKNLRLYDARTN---QGSVVRNTYLGHNAWVQAVMWSTTEEFLFVSGAYDNQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++W++ +YI+SGG DNSVRVFK++
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSGGADNSVRVFKSR 409
Score = 213 (80.0 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 51/141 (36%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP +TL+GH+E+ISAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 241 RTPKMTLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEG------IKTEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L V+AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 294 IFDASYSNLN-RLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLF 352
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 353 V-SGAYDNQNKLWDCR-SPKA 371
Score = 149 (57.5 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE ++SS D T +W +G + S H+
Sbjct: 137 ILTISGHTAPIKAVDWISLDEESGRFVSSSQDQTAMLWQWNVGSNTAECV--SVCKGHER 194
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR---------------SPKVPLFDMLGHEDK 145
V SV SP D Q F + S+D +K+W + P + GH +
Sbjct: 195 GVDSVSVSP-DGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQGHRES 253
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
+ V W D +++G D++++V+
Sbjct: 254 ISAVQWMDASTLLTGSWDHTLKVW 277
Score = 133 (51.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 35/136 (25%), Positives = 68/136 (50%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL--GG------MKKGAI--VKSTFSS 97
KGH+ + +V + + T SWD LK+W AEL G MK+ + K T
Sbjct: 190 KGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELDDAGEGTSKRMKESGVRTPKMTLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RY 156
H+E + +V+W +D ++ S+D+++K+WDL + + + ++S+ R
Sbjct: 250 HRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKT--EISTNKSIFDASYSNLNRL 305
Query: 157 IMSGGQDNSVRVFKTK 172
I++ D ++R++ +
Sbjct: 306 IVTASADKNLRLYDAR 321
>UNIPROTKB|Q29KQ0 [details] [associations]
symbol:GA19813 "Ribosome biogenesis protein WDR12 homolog"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH379061 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 HSSP:P61964 KO:K14863
OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001356065.1
ProteinModelPortal:Q29KQ0 GeneID:4816649 KEGG:dpo:Dpse_GA19813
FlyBase:FBgn0079809 InParanoid:Q29KQ0 Uniprot:Q29KQ0
Length = 419
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 53/107 (49%), Positives = 80/107 (74%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D+ +G++V++T+ H WVQ+V WS + LFVS S+DN K
Sbjct: 306 ILTASADKNLRLYDSRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGSDNTVRVFKSR 409
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E+ISAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 241 RTPKITLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEG------IKAEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 294 IFDASYSKLN-HLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 353 V-SGSYDNQNKLWDCR-SPKA 371
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++D+ ++SS D T +W +G + S H+
Sbjct: 137 ILTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECV--SVCKGHER 194
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLW--DLRSP-------------KVPLFDMLGHEDK 145
V SV SP D Q F + S+D +K+W +L + P + GH +
Sbjct: 195 GVDSVSVSP-DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRES 253
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
+ V W D +++G D++++V+
Sbjct: 254 ISAVQWMDASTLLTGSWDHTLKVW 277
Score = 130 (50.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 34/136 (25%), Positives = 68/136 (50%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL--GG------MKKGAI--VKSTFSS 97
KGH+ + +V + + T SWD LK+W AEL G MK+ + K T
Sbjct: 190 KGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY- 156
H+E + +V+W +D ++ S+D+++K+WDL + + + ++S +
Sbjct: 250 HRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKA--EISTNKSIFDASYSKLNHL 305
Query: 157 IMSGGQDNSVRVFKTK 172
I++ D ++R++ ++
Sbjct: 306 ILTASADKNLRLYDSR 321
>UNIPROTKB|B4Q9T6 [details] [associations]
symbol:GD22226 "Ribosome biogenesis protein WDR12 homolog"
species:7240 "Drosophila simulans" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CM000361 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002079018.1
ProteinModelPortal:B4Q9T6 EnsemblMetazoa:FBtr0222136 GeneID:6731883
KEGG:dsi:Dsim_GD22226 FlyBase:FBgn0193635 Uniprot:B4Q9T6
Length = 420
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 54/107 (50%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 307 ILTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 363
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH DKV+ ++WS+ +YI+SGG DNSVRVFK++
Sbjct: 364 LWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNSVRVFKSR 410
Score = 203 (76.5 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 49/141 (34%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E++SAVQW ++T SWD+TLK+WD L G +K+ S++K
Sbjct: 242 RTPKITLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEG------IKTEISTNKS- 294
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 295 IFDASYSKLN-RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 354 V-SGAYDNQNKLWDCR-SPKA 372
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE +++S D T +W +G + S H+
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCV--SVCKGHER 195
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR-------SPK--------VPLFDMLGHEDK 145
V SV SP D F + S+D +K+W S K P + GH +
Sbjct: 196 GVDSVSVSP-DGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRES 254
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
V V W D +++G D +++V+
Sbjct: 255 VSAVQWMDATTLLTGSWDYTLKVW 278
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 49 KGHKEAISAVQWTAVDEI--ITSSWDHTLKIWDAEL-----GG---MKKGAI--VKSTFS 96
KGH+ + +V + D + T SWD LK+W AEL G MK+ + K T
Sbjct: 191 KGHERGVDSVS-VSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQ 249
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R 155
H+E V +V+W +D ++ S+D ++K+WDL + + + ++S R
Sbjct: 250 GHRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKT--EISTNKSIFDASYSKLNR 305
Query: 156 YIMSGGQDNSVRVFKTKHQPKSGQKS 181
I++ D ++R++ P++ Q S
Sbjct: 306 LILTASADKNLRLY----DPRTNQGS 327
>UNIPROTKB|B4JPT9 [details] [associations]
symbol:GH13339 "Ribosome biogenesis protein WDR12 homolog"
species:7222 "Drosophila grimshawi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH916372 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_001992994.1 ProteinModelPortal:B4JPT9 STRING:B4JPT9
EnsemblMetazoa:FBtr0148753 GeneID:6566798 KEGG:dgr:Dgri_GH13339
FlyBase:FBgn0120815 InParanoid:B4JPT9 Uniprot:B4JPT9
Length = 419
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 53/107 (49%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS S+DN K
Sbjct: 306 IVTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVFKSR 409
Score = 207 (77.9 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 51/141 (36%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP +TL+GH+E+ISAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 241 RTPKMTLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDLNLEG------IKTEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L V+AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 294 IFDANFSKLN-RLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 353 V-SGSYDNQNKLWDCR-SPKA 371
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 39/144 (27%), Positives = 66/144 (45%)
Query: 45 LITLKGHKEAISAVQWTAVDEI----ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE+ +++S D T +W + + S H+
Sbjct: 137 ILTIPGHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQWNIDSNAVDCV--SVCKGHER 194
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR-------SPK--------VPLFDMLGHEDK 145
V SV SP D Q F + S+D +KLW S K P + GH +
Sbjct: 195 SVDSVAVSP-DAQRFATGSWDTMLKLWSAELEDAVEGSAKRAKESGVRTPKMTLQGHRES 253
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
+ V W D +++G D++++V+
Sbjct: 254 ISAVQWMDGTTLLTGSWDHTLKVW 277
Score = 133 (51.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 38/145 (26%), Positives = 69/145 (47%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAEL-----GGMKKGA-----IVKSTFSS 97
KGH+ ++ +V + T SWD LK+W AEL G K+ K T
Sbjct: 190 KGHERSVDSVAVSPDAQRFATGSWDTMLKLWSAELEDAVEGSAKRAKESGVRTPKMTLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RY 156
H+E + +V+W +D ++ S+D+++K+WDL + + + N+S R
Sbjct: 250 HRESISAVQW--MDGTTLLTGSWDHTLKVWDLNLEGIKT--EISTNKSIFDANFSKLNRL 305
Query: 157 IMSGGQDNSVRVFKTKHQPKSGQKS 181
I++ D ++R++ P++ Q S
Sbjct: 306 IVTASADKNLRLY----DPRTNQGS 326
>UNIPROTKB|B4GT01 [details] [associations]
symbol:GL26386 "Ribosome biogenesis protein WDR12 homolog"
species:7234 "Drosophila persimilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH479189 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002021667.1
ProteinModelPortal:B4GT01 EnsemblMetazoa:FBtr0192001 GeneID:6596580
KEGG:dpe:Dper_GL26386 FlyBase:FBgn0163968 Uniprot:B4GT01
Length = 419
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 52/107 (48%), Positives = 80/107 (74%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D+ +G++V++T+ H WVQ+V WS + LFVS S+DN K
Sbjct: 306 ILTASADKNLRLYDSRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++W++ +YI+SGG DN+VRVFK++
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWTNPKYIVSGGSDNTVRVFKSR 409
Score = 211 (79.3 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 51/141 (36%), Positives = 83/141 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E+ISAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 241 RTPKITLQGHRESISAVQWMDASTLLTGSWDHTLKVWDLSLEG------IKAEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 294 IFDASYSKLN-HLILTASADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 352
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 353 V-SGSYDNQNKLWDCR-SPKA 371
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/144 (26%), Positives = 67/144 (46%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++D+ ++SS D T +W +G + S H+
Sbjct: 137 ILTIPGHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECV--SVCKGHER 194
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLW--DLRSP-------------KVPLFDMLGHEDK 145
V SV SP D Q F + S+D +K+W +L + P + GH +
Sbjct: 195 GVDSVSVSP-DGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRES 253
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
+ V W D +++G D++++V+
Sbjct: 254 ISAVQWMDASTLLTGSWDHTLKVW 277
Score = 130 (50.8 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 34/136 (25%), Positives = 68/136 (50%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAEL--GG------MKKGAI--VKSTFSS 97
KGH+ + +V + + T SWD LK+W AEL G MK+ + K T
Sbjct: 190 KGHERGVDSVSVSPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY- 156
H+E + +V+W +D ++ S+D+++K+WDL + + + ++S +
Sbjct: 250 HRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKA--EISTNKSIFDASYSKLNHL 305
Query: 157 IMSGGQDNSVRVFKTK 172
I++ D ++R++ ++
Sbjct: 306 ILTASADKNLRLYDSR 321
>UNIPROTKB|B4HWV6 [details] [associations]
symbol:GM11446 "Ribosome biogenesis protein WDR12 homolog"
species:7238 "Drosophila sechellia" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 EMBL:CH480818 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002036578.1
ProteinModelPortal:B4HWV6 EnsemblMetazoa:FBtr0194431 GeneID:6612061
KEGG:dse:Dsec_GM11446 FlyBase:FBgn0166389 Uniprot:B4HWV6
Length = 420
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 53/107 (49%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 307 ILTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 363
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH DKV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 364 LWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRVFKSR 410
Score = 203 (76.5 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 49/141 (34%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E++SAVQW ++T SWD+TLK+WD L G +K+ S++K
Sbjct: 242 RTPKITLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEG------IKTEISTNKS- 294
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 295 IFDASYSKLN-RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 354 V-SGAYDNQNKLWDCR-SPKA 372
Score = 137 (53.3 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE +++S D T +W +G + S H+
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCV--SVCKGHER 195
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR-------SPK--------VPLFDMLGHEDK 145
V SV SP D F + S+D +K+W S K P + GH +
Sbjct: 196 GVDSVSVSP-DGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRES 254
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
V V W D +++G D +++V+
Sbjct: 255 VSAVQWMDATTLLTGSWDYTLKVW 278
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 49 KGHKEAISAVQWTAVDEI--ITSSWDHTLKIWDAEL-----GG---MKKGAI--VKSTFS 96
KGH+ + +V + D + T SWD LK+W AEL G MK+ + K T
Sbjct: 191 KGHERGVDSVS-VSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQ 249
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R 155
H+E V +V+W +D ++ S+D ++K+WDL + + + ++S R
Sbjct: 250 GHRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKT--EISTNKSIFDASYSKLNR 305
Query: 156 YIMSGGQDNSVRVFKTKHQPKSGQKS 181
I++ D ++R++ P++ Q S
Sbjct: 306 LILTASADKNLRLY----DPRTNQGS 327
>UNIPROTKB|B4LS78 [details] [associations]
symbol:GJ17641 "Ribosome biogenesis protein WDR12 homolog"
species:7244 "Drosophila virilis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH940649 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
RefSeq:XP_002052609.1 ProteinModelPortal:B4LS78 STRING:B4LS78
EnsemblMetazoa:FBtr0233566 GeneID:6629233 KEGG:dvi:Dvir_GJ17641
FlyBase:FBgn0204810 InParanoid:B4LS78 Uniprot:B4LS78
Length = 419
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 53/106 (50%), Positives = 78/106 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++DA +G++V++T+ H WVQ+V WS + LFVS S+D K
Sbjct: 306 IVTASADKNLRLYDARTN---QGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGSYDTQNK 362
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKT 171
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK+
Sbjct: 363 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVFKS 408
Score = 210 (79.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 50/140 (35%), Positives = 82/140 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP +TL+GH+E+ISAVQW ++T SWDHTLK+WD +L G +K+ S++K
Sbjct: 241 RTPKMTLQGHRESISAVQWMDATTLVTGSWDHTLKVWDLQLEG------IKTEISTNKS- 293
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWSDYRYIM- 158
+ +S ++ +L V+AS D +++L+D R+ + V LGH V V WS+ +
Sbjct: 294 IFDASYSKLN-RLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLF 352
Query: 159 -SGGQDNSVRVFKTKHQPKS 177
SG D +++ + PK+
Sbjct: 353 VSGSYDTQNKLWDCR-SPKA 371
Score = 133 (51.9 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 37/143 (25%), Positives = 65/143 (45%)
Query: 46 ITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+T+ GH I AV W ++D+ +++S D T +W + + S H+
Sbjct: 138 LTIPGHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQWNIASNAVECV--SVCKGHERG 195
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLW----DLRSP-----------KVPLFDMLGHEDKV 146
V SV SP D Q F + S+D +K+W D S + P + GH + +
Sbjct: 196 VDSVCVSP-DAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQGHRESI 254
Query: 147 MCVNWSDYRYIMSGGQDNSVRVF 169
V W D +++G D++++V+
Sbjct: 255 SAVQWMDATTLVTGSWDHTLKVW 277
Score = 125 (49.1 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 34/136 (25%), Positives = 63/136 (46%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIV----------KSTFSS 97
KGH+ + +V + T SWD LKIW A L +G K T
Sbjct: 190 KGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQG 249
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RY 156
H+E + +V+W +D V+ S+D+++K+WDL+ + + + ++S R
Sbjct: 250 HRESISAVQW--MDATTLVTGSWDHTLKVWDLQLEGIKT--EISTNKSIFDASYSKLNRL 305
Query: 157 IMSGGQDNSVRVFKTK 172
I++ D ++R++ +
Sbjct: 306 IVTASADKNLRLYDAR 321
>UNIPROTKB|B4MU54 [details] [associations]
symbol:GK23981 "Ribosome biogenesis protein WDR12 homolog"
species:7260 "Drosophila willistoni" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
EMBL:CH963852 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB
HAMAP:MF_03029 RefSeq:XP_002064657.1 ProteinModelPortal:B4MU54
STRING:B4MU54 EnsemblMetazoa:FBtr0254632 GeneID:6641752
KEGG:dwi:Dwil_GK23981 FlyBase:FBgn0225943 InParanoid:B4MU54
Uniprot:B4MU54
Length = 423
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 53/107 (49%), Positives = 78/107 (72%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G+IV++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 310 IVTASADKNLRLYDPRTN---QGSIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 366
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI SGG DN+VRVFK++
Sbjct: 367 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYICSGGADNTVRVFKSR 413
Score = 214 (80.4 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 50/141 (35%), Positives = 86/141 (60%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP++TL+GH+E+ISAVQW ++T+SWDHT+KIWD L G +K+ S++K
Sbjct: 245 RTPIMTLQGHRESISAVQWIDTSTLLTTSWDHTMKIWDLSLEG------IKTEISTNKS- 297
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLF--DMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L V+AS D +++L+D R+ + + LGH V V WS ++ +
Sbjct: 298 IFDASYSNLN-RLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEEFLF 356
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 357 V-SGAYDNQNKLWDCR-SPKA 375
Score = 118 (46.6 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/147 (24%), Positives = 70/147 (47%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDA---ELGG------MKKGAIVKS---TF 95
KGH+ + ++ + T SWD LK+W A + GG K V++ T
Sbjct: 192 KGHERGVDSISVSPDATRFATGSWDTMLKVWSAAEDDAGGDAASSKRPKENGVRTPIMTL 251
Query: 96 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY- 154
H+E + +V+W ID ++ S+D+++K+WDL + + + ++S+
Sbjct: 252 QGHRESISAVQW--IDTSTLLTTSWDHTMKIWDLSLEGIKT--EISTNKSIFDASYSNLN 307
Query: 155 RYIMSGGQDNSVRVFKTKHQPKSGQKS 181
R I++ D ++R++ P++ Q S
Sbjct: 308 RLIVTASADKNLRLY----DPRTNQGS 330
>FB|FBgn0032298 [details] [associations]
symbol:CG6724 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005654 EMBL:AE014134
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 HSSP:P63005 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OMA:LQTRFFT OrthoDB:EOG4BNZTB HAMAP:MF_03029
GeneTree:ENSGT00640000091456 EMBL:AY118871 RefSeq:NP_609452.1
UniGene:Dm.37812 ProteinModelPortal:Q9VKQ3 SMR:Q9VKQ3 IntAct:Q9VKQ3
MINT:MINT-818926 STRING:Q9VKQ3 PaxDb:Q9VKQ3 PRIDE:Q9VKQ3
EnsemblMetazoa:FBtr0080191 GeneID:34488 KEGG:dme:Dmel_CG6724
UCSC:CG6724-RA FlyBase:FBgn0032298 InParanoid:Q9VKQ3
PhylomeDB:Q9VKQ3 GenomeRNAi:34488 NextBio:788731 Bgee:Q9VKQ3
Uniprot:Q9VKQ3
Length = 420
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 52/107 (48%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 307 ILTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 363
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 364 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKSR 410
Score = 209 (78.6 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 50/141 (35%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E++SAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 242 RTPKITLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEG------IKTEISTNKS- 294
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 295 IFDASYSKLN-RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 354 V-SGAYDNQNKLWDCR-SPKA 372
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 39/144 (27%), Positives = 65/144 (45%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE +++S D T +W +G + S H+
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECV--SVCKGHER 195
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR-------SPK--------VPLFDMLGHEDK 145
V SV SP D F + S+D +K+W S K P + GH +
Sbjct: 196 GVDSVSVSP-DGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRES 254
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
V V W D +++G D++++V+
Sbjct: 255 VSAVQWMDATTLLTGSWDHTLKVW 278
Score = 131 (51.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 49 KGHKEAISAVQWTAVDEI--ITSSWDHTLKIWDAEL-----GG---MKKGAI--VKSTFS 96
KGH+ + +V + D + T SWD LK+W AEL G MK+ + K T
Sbjct: 191 KGHERGVDSVS-VSPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQ 249
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-R 155
H+E V +V+W +D ++ S+D+++K+WDL + + + ++S R
Sbjct: 250 GHRESVSAVQW--MDATTLLTGSWDHTLKVWDLSLEGIKT--EISTNKSIFDASYSKLNR 305
Query: 156 YIMSGGQDNSVRVFKTKHQPKSGQKS 181
I++ D ++R++ P++ Q S
Sbjct: 306 LILTASADKNLRLY----DPRTNQGS 327
>UNIPROTKB|B3N534 [details] [associations]
symbol:GG10358 "Ribosome biogenesis protein WDR12 homolog"
species:7220 "Drosophila erecta" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH954177
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_001969920.1
ProteinModelPortal:B3N534 EnsemblMetazoa:FBtr0130412 GeneID:6542886
KEGG:der:Dere_GG10358 FlyBase:FBgn0102667 Uniprot:B3N534
Length = 420
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 52/107 (48%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 307 ILTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 363
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 364 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKSR 410
Score = 210 (79.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 50/141 (35%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E++SAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 242 RTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEG------IKTEISTNKS- 294
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 295 IFDASYSKLN-RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 354 V-SGAYDNQNKLWDCR-SPKA 372
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 37/144 (25%), Positives = 64/144 (44%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE +++S D T +W +G + S H+
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECV--SVCKGHER 195
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP---------------KVPLFDMLGHEDK 145
V SV SP D F + S+D +K+W + P + GH +
Sbjct: 196 GVDSVSVSP-DGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRES 254
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
V V W D +++G D++++V+
Sbjct: 255 VSAVQWMDASTLLTGSWDHTLKVW 278
>UNIPROTKB|B4P116 [details] [associations]
symbol:GE13328 "Ribosome biogenesis protein WDR12 homolog"
species:7245 "Drosophila yakuba" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM000157 GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972
Pfam:PF08154 KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029
EMBL:AY231921 RefSeq:XP_002088279.1 ProteinModelPortal:B4P116
STRING:B4P116 EnsemblMetazoa:FBtr0259846 GeneID:6527185
KEGG:dya:Dyak_GE13328 FlyBase:FBgn0068268 Uniprot:B4P116
Length = 420
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 52/107 (48%), Positives = 79/107 (73%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+S D L+++D +G++V++T+ H WVQ+V WS + LFVS ++DN K
Sbjct: 307 ILTASADKNLRLYDPRTN---QGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 363
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
LWD RSPK PL+D+LGH +KV+ ++WS+ +YI+SGG DN+VRVFK++
Sbjct: 364 LWDCRSPKAPLYDLLGHGEKVLDIDWSNPKYIVSGGVDNTVRVFKSR 410
Score = 210 (79.0 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 50/141 (35%), Positives = 84/141 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
+TP ITL+GH+E++SAVQW ++T SWDHTLK+WD L G +K+ S++K
Sbjct: 242 RTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEG------IKTEISTNKS- 294
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWS---DYRY 156
+ +S ++ +L ++AS D +++L+D R+ + V LGH V V WS ++ +
Sbjct: 295 IFDASYSKLN-RLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 157 IMSGGQDNSVRVFKTKHQPKS 177
+ SG DN +++ + PK+
Sbjct: 354 V-SGAYDNQNKLWDCR-SPKA 372
Score = 141 (54.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 39/144 (27%), Positives = 65/144 (45%)
Query: 45 LITLKGHKEAISAVQWTAVDE----IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
++T+ GH I AV W ++DE +++S D T +W +G + S H+
Sbjct: 138 ILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECV--SVCKGHER 195
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR-------SPK--------VPLFDMLGHEDK 145
V SV SP D F + S+D +K+W S K P + GH +
Sbjct: 196 GVDSVSVSP-DGLRFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPKITLQGHRES 254
Query: 146 VMCVNWSDYRYIMSGGQDNSVRVF 169
V V W D +++G D++++V+
Sbjct: 255 VSAVQWMDASTLLTGSWDHTLKVW 278
>RGD|735072 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10116 "Rattus
norvegicus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005654 "nucleoplasm"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO;ISS]
[GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0008283
"cell proliferation" evidence=ISO;ISS] [GO:0030687 "preribosome,
large subunit precursor" evidence=ISO;ISS] [GO:0070545 "PeBoW
complex" evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:735072 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC063180 IPI:IPI00400751
RefSeq:NP_955442.1 UniGene:Rn.106890 ProteinModelPortal:P61480
STRING:P61480 PRIDE:P61480 Ensembl:ENSRNOT00000023463 GeneID:363237
KEGG:rno:363237 UCSC:RGD:735072 InParanoid:P61480 NextBio:682950
Genevestigator:P61480 GermOnline:ENSRNOG00000017340 Uniprot:P61480
Length = 423
Score = 261 (96.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHDQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 244 (91.0 bits), Expect = 2.8e-20, P = 2.8e-20
Identities = 54/140 (38%), Positives = 83/140 (59%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TPL+TL GH EAIS+V W+ DE+ ++SWDHT+++WD E GG+K ST +
Sbjct: 242 QLGLTRTPLVTLSGHTEAISSVLWSDADEVCSASWDHTVRVWDVESGGLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HDQQLISGSLDNMVKLWDTR 373
>UNIPROTKB|Q0VC24 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9913 "Bos taurus" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS] [GO:0008283
"cell proliferation" evidence=ISS] [GO:0000466 "maturation of 5.8S
rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0007219 "Notch signaling
pathway" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 EMBL:BT029892 EMBL:BC120386 EMBL:BC142121
IPI:IPI00725024 RefSeq:NP_001069375.1 UniGene:Bt.42368
ProteinModelPortal:Q0VC24 STRING:Q0VC24 Ensembl:ENSBTAT00000020499
GeneID:528209 KEGG:bta:528209 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 InParanoid:Q0VC24
OrthoDB:EOG4V6ZGM NextBio:20874770 Uniprot:Q0VC24
Length = 423
Score = 261 (96.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNMVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDSGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 243 (90.6 bits), Expect = 3.7e-20, P = 3.7e-20
Identities = 54/140 (38%), Positives = 83/140 (59%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TP++TL GHKEAIS+V W+ +EI ++SWDHT+K+WD E G +K ST +
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIKVWDVESGSLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNMVKLWDTR 373
>UNIPROTKB|A8QB65 [details] [associations]
symbol:Bm1_47965 "Ribosome biogenesis protein WDR12
homolog" species:6279 "Brugia malayi" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545
GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HAMAP:MF_03029 EMBL:DS239429 RefSeq:XP_001901055.1
ProteinModelPortal:A8QB65 GeneID:6104478 KEGG:bmy:Bm1_47965
CTD:6104478 Uniprot:A8QB65
Length = 433
Score = 261 (96.9 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 44/107 (41%), Positives = 71/107 (66%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+IT S D +++WD +G +VK +F H W+ SV W+ + LF+SASFD +VK
Sbjct: 329 LITGSVDPVVRLWDPR---SHEGTLVKQSFIGHCGWISSVFWNKVKENLFISASFDKTVK 385
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
+WD+RS K PL+D++GH D+++C +WS I+SGG D +++ ++ K
Sbjct: 386 MWDVRSNKTPLYDLVGHSDRILCCDWSVNELIVSGGVDCTMKTYRRK 432
Score = 180 (68.4 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 39 ILQKTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
I+ K P++TL GHK+AI + W+ + E++T SWDHT+ IWD EL G K F+
Sbjct: 259 IITKIPMVTLSGHKDAIVSAVWSPNSAKEVLTVSWDHTISIWDLELAGQINTLAAKKAFT 318
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLF--DMLGHEDKVMCVNWSDY 154
S S + ++ S D V+LWD RS + L +GH + V W+
Sbjct: 319 SISVCCSS--------GMLITGSVDPVVRLWDPRSHEGTLVKQSFIGHCGWISSVFWNKV 370
Query: 155 R--YIMSGGQDNSVRVFKTK 172
+ +S D +V+++ +
Sbjct: 371 KENLFISASFDKTVKMWDVR 390
>UNIPROTKB|Q9GZL7 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9606 "Homo sapiens" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IC] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0070545 "PeBoW complex" evidence=IDA] [GO:0000463 "maturation
of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0030687 "preribosome, large subunit
precursor" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972
Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464 OMA:LQTRFFT
HAMAP:MF_03029 CTD:55759 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:AF242546 EMBL:AK001743 EMBL:AK022781 EMBL:AK022782
EMBL:AK056092 EMBL:BC008082 IPI:IPI00304232 RefSeq:NP_060726.3
UniGene:Hs.73291 ProteinModelPortal:Q9GZL7 SMR:Q9GZL7 IntAct:Q9GZL7
STRING:Q9GZL7 PhosphoSite:Q9GZL7 DMDM:20140802 SWISS-2DPAGE:Q9GZL7
PaxDb:Q9GZL7 PeptideAtlas:Q9GZL7 PRIDE:Q9GZL7 DNASU:55759
Ensembl:ENST00000261015 GeneID:55759 KEGG:hsa:55759 UCSC:uc002uzl.3
GeneCards:GC02M203709 HGNC:HGNC:14098 HPA:HPA036389
neXtProt:NX_Q9GZL7 PharmGKB:PA37841 InParanoid:Q9GZL7
PhylomeDB:Q9GZL7 GenomeRNAi:55759 NextBio:60775 ArrayExpress:Q9GZL7
Bgee:Q9GZL7 CleanEx:HS_WDR12 Genevestigator:Q9GZL7
GermOnline:ENSG00000138442 Uniprot:Q9GZL7
Length = 423
Score = 260 (96.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 232 (86.7 bits), Expect = 6.2e-19, P = 6.2e-19
Identities = 51/140 (36%), Positives = 82/140 (58%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TP++TL GH EA+S+V W+ +EI ++SWDHT+++WD E G +K ST +
Sbjct: 242 QLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNIVKLWDTR 373
>UNIPROTKB|Q5REE6 [details] [associations]
symbol:WDR12 "Ribosome biogenesis protein WDR12"
species:9601 "Pongo abelii" [GO:0000463 "maturation of LSU-rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 HSSP:P16649
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:LQTRFFT HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:CR857583 RefSeq:NP_001124867.1 UniGene:Pab.3253
ProteinModelPortal:Q5REE6 Ensembl:ENSPPYT00000015218
GeneID:100171729 KEGG:pon:100171729 InParanoid:Q5REE6
Uniprot:Q5REE6
Length = 423
Score = 260 (96.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 51/130 (39%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 231 (86.4 bits), Expect = 8.0e-19, P = 8.0e-19
Identities = 51/140 (36%), Positives = 82/140 (58%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TP++TL GH EA+S+V W+ +EI ++SWDHT+++WD E G +K ST +
Sbjct: 242 QLGLTRTPVVTLSGHMEAVSSVLWSDAEEICSASWDHTIRVWDVESGSLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNIVKLWDTR 373
>UNIPROTKB|F1P2Y8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0070545 "PeBoW complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:AADN02019869 IPI:IPI00587836
Ensembl:ENSGALT00000013803 Uniprot:F1P2Y8
Length = 411
Score = 259 (96.2 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 50/125 (40%), Positives = 77/125 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K ++V ++ + + S S D +++WD K G++V + +SH WV SV
Sbjct: 281 TLTGNK-VFNSVSYSPLCRRLASGSTDRHIRLWDPR---SKDGSLVLLSLTSHTGWVTSV 336
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP +S S DN VKLWD RS K PL+D+ HEDKV+CV+W++ ++SGG DN
Sbjct: 337 KWSPTHEHQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLCVDWTEAGLLLSGGADNK 396
Query: 166 VRVFK 170
+ ++
Sbjct: 397 LYCYR 401
Score = 255 (94.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 59/140 (42%), Positives = 84/140 (60%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TPL TL GH EAIS+V W+ +EI ++SWDHT+K+WDAE GG+K ST +
Sbjct: 230 QLGLTRTPLATLSGHTEAISSVLWSDAEEICSASWDHTIKLWDAETGGLK------STLT 283
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP--KVPLFDMLGHEDKVMCVNWSDY 154
+K + SV +SP+ +L S S D ++LWD RS + L + H V V WS
Sbjct: 284 GNKVF-NSVSYSPLCRRL-ASGSTDRHIRLWDPRSKDGSLVLLSLTSHTGWVTSVKWSPT 341
Query: 155 R--YIMSGGQDNSVRVFKTK 172
++SG DN V+++ T+
Sbjct: 342 HEHQLISGSLDNIVKLWDTR 361
>MGI|MGI:1927241 [details] [associations]
symbol:Wdr12 "WD repeat domain 12" species:10090 "Mus
musculus" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IPI]
[GO:0008283 "cell proliferation" evidence=ISO] [GO:0030687
"preribosome, large subunit precursor" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0070545 "PeBoW complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1927241 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:AY059431 EMBL:AY059432
EMBL:AF239765 EMBL:AB041608 EMBL:AK007500 EMBL:AK012022
EMBL:AK016611 EMBL:AK031436 EMBL:BC004748 EMBL:BC052386
IPI:IPI00121562 RefSeq:NP_001185989.1 RefSeq:NP_001185990.1
RefSeq:NP_067287.1 UniGene:Mm.281079 ProteinModelPortal:Q9JJA4
SMR:Q9JJA4 STRING:Q9JJA4 PhosphoSite:Q9JJA4 PaxDb:Q9JJA4
PRIDE:Q9JJA4 Ensembl:ENSMUST00000027173 Ensembl:ENSMUST00000117438
Ensembl:ENSMUST00000122038 GeneID:57750 KEGG:mmu:57750
InParanoid:Q9JJA4 NextBio:313896 Bgee:Q9JJA4 CleanEx:MM_WDR12
Genevestigator:Q9JJA4 GermOnline:ENSMUSG00000026019 Uniprot:Q9JJA4
Length = 423
Score = 258 (95.9 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 51/130 (39%), Positives = 79/130 (60%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ + P
Sbjct: 408 -KLYSYSYSP 416
Score = 241 (89.9 bits), Expect = 6.2e-20, P = 6.2e-20
Identities = 54/140 (38%), Positives = 83/140 (59%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TPL+TL GH EAIS+V W+ +EI ++SWDHT+++WD E GG+K ST +
Sbjct: 242 QLGLTRTPLVTLSGHTEAISSVLWSDAEEICSASWDHTIRVWDVESGGLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNIVKLWDTR 373
>UNIPROTKB|E2RNA4 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070545 "PeBoW complex" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
CTD:55759 GeneTree:ENSGT00640000091456 EMBL:AAEX03018031
RefSeq:XP_536036.3 Ensembl:ENSCAFT00000019894 GeneID:478876
KEGG:cfa:478876 Uniprot:E2RNA4
Length = 423
Score = 257 (95.5 bits), Expect = 9.6e-22, P = 9.6e-22
Identities = 50/130 (38%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV S+
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSL 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W+D ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 236 (88.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 52/140 (37%), Positives = 83/140 (59%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TP++TL GHKEAIS+V W+ +EI ++SWDHT+++WD E G +K ST +
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIRVWDVESGSLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V + WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSLKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNIVKLWDTR 373
>UNIPROTKB|F1SHE8 [details] [associations]
symbol:WDR12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070545 "PeBoW complex" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GO:GO:0030687 GO:GO:0070545 GO:GO:0000463
GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154 KO:K14863 OMA:LQTRFFT
GeneTree:ENSGT00640000091456 EMBL:CU469263 RefSeq:XP_003133640.3
Ensembl:ENSSSCT00000017547 GeneID:100512929 KEGG:ssc:100512929
Uniprot:F1SHE8
Length = 423
Score = 255 (94.8 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 50/130 (38%), Positives = 80/130 (61%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLTGNK-VFNCISYSPLCKRLASGSTDRHIRLWDPRT---KDGSLVSLSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q +S S DN VKLWD RS K PL+D+ HEDKV+ V+W++ ++SGG DN
Sbjct: 349 KWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTNTGLLLSGGADN- 407
Query: 166 VRVFKTKHQP 175
+++ ++ P
Sbjct: 408 -KLYSYRYSP 416
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 53/140 (37%), Positives = 82/140 (58%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TP++TL GHKEAIS+V W+ +EI ++SWDHT+ +WD E G +K ST +
Sbjct: 242 QLGLTRTPIVTLSGHKEAISSVLWSDAEEICSASWDHTIGVWDVESGSLK------STLT 295
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPL--FDMLGHEDKVMCVNWSDY 154
+K + + +SP+ +L S S D ++LWD R+ L + H V V WS
Sbjct: 296 GNKVF-NCISYSPLCKRL-ASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWSPT 353
Query: 155 --RYIMSGGQDNSVRVFKTK 172
+ ++SG DN V+++ T+
Sbjct: 354 HEQQLISGSLDNIVKLWDTR 373
>UNIPROTKB|B5DG67 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8030 "Salmo salar" [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730
"nucleolus" evidence=ISS] [GO:0008283 "cell proliferation"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030687 GO:GO:0070545 GO:GO:0000463 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 HAMAP:MF_03029 EMBL:BT043626
ProteinModelPortal:B5DG67 Uniprot:B5DG67
Length = 423
Score = 253 (94.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 45/105 (42%), Positives = 67/105 (63%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+ + S D +++WD K G++V + +SH WV +V+W+P VS S DN VK
Sbjct: 312 LASGSTDRHVRLWDPR---SKDGSLVLLSLTSHSGWVTAVKWAPSHEHQLVSGSLDNLVK 368
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
LWD RS K PL+D+ HEDKV+CV+W+D R ++SGG DN + ++
Sbjct: 369 LWDTRSCKAPLYDVSAHEDKVLCVDWTDSRLMLSGGADNKLYTYR 413
Score = 235 (87.8 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 54/140 (38%), Positives = 79/140 (56%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
QL L +TPL+TL GH EA+S+V W +EI ++SWDHT+++WDAE G +K F+
Sbjct: 242 QLGLTRTPLMTLSGHNEAVSSVLWLDSEEICSASWDHTIRLWDAETGSVKTSLTGSKVFN 301
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP--KVPLFDMLGHEDKVMCVNW--S 152
H + +SP+ +L S S D V+LWD RS + L + H V V W S
Sbjct: 302 -H------ISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHSGWVTAVKWAPS 353
Query: 153 DYRYIMSGGQDNSVRVFKTK 172
++SG DN V+++ T+
Sbjct: 354 HEHQLVSGSLDNLVKLWDTR 373
>UNIPROTKB|Q5BJ90 [details] [associations]
symbol:wdr12 "Ribosome biogenesis protein wdr12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0000466
"maturation of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008283 "cell proliferation" evidence=ISS] [GO:0030687
"preribosome, large subunit precursor" evidence=ISS] [GO:0070545
"PeBoW complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687 GO:GO:0070545
GO:GO:0000463 GO:GO:0000466 InterPro:IPR012972 Pfam:PF08154
KO:K14863 HOGENOM:HOG000264464 HAMAP:MF_03029 CTD:55759
GeneTree:ENSGT00640000091456 HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM
EMBL:BC091577 RefSeq:NP_001025628.1 UniGene:Str.36786 HSSP:Q02793
ProteinModelPortal:Q5BJ90 STRING:Q5BJ90 Ensembl:ENSXETT00000047773
GeneID:595016 KEGG:xtr:595016 Xenbase:XB-GENE-945426 OMA:DNSIGFW
Bgee:Q5BJ90 Uniprot:Q5BJ90
Length = 423
Score = 253 (94.1 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 50/125 (40%), Positives = 75/125 (60%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G+K + + ++ + + + S S D +++WD K G++V + +SH WV SV
Sbjct: 293 TLAGNK-VFNCISYSPLSQRLASGSTDRHIRLWDPR---SKDGSLVLCSLTSHTGWVTSV 348
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+WSP Q VS S D VKLWD RS K PL+D+ H DKV+ V+W+D I+SGG DN
Sbjct: 349 KWSPSHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWTDAGLILSGGSDNK 408
Query: 166 VRVFK 170
+ ++
Sbjct: 409 LYSYR 413
Score = 233 (87.1 bits), Expect = 4.8e-19, P = 4.8e-19
Identities = 52/137 (37%), Positives = 79/137 (57%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
L + P++TL GH EA+S+V W+ VDEI ++SWDH +KIWD E G VKST + +K
Sbjct: 245 LTRIPIVTLSGHSEAVSSVLWSDVDEICSASWDHNIKIWDVETG------TVKSTLAGNK 298
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP--KVPLFDMLGHEDKVMCVNWSDY--R 155
+ + +SP+ +L S S D ++LWD RS + L + H V V WS +
Sbjct: 299 VF-NCISYSPLSQRL-ASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSPSHEQ 356
Query: 156 YIMSGGQDNSVRVFKTK 172
++SG D V+++ T+
Sbjct: 357 QLVSGSLDKLVKLWDTR 373
>ZFIN|ZDB-GENE-030131-371 [details] [associations]
symbol:wdr12 "WD repeat domain 12" species:7955
"Danio rerio" [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
[GO:0030687 "preribosome, large subunit precursor" evidence=ISS]
[GO:0070545 "PeBoW complex" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-371 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030687
GO:GO:0070545 GO:GO:0000463 HSSP:P16649 GO:GO:0000466
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
OMA:LQTRFFT HAMAP:MF_03029 CTD:55759 GeneTree:ENSGT00640000091456
HOVERGEN:HBG054155 OrthoDB:EOG4V6ZGM EMBL:BC044198 EMBL:BC067331
EMBL:BC155268 IPI:IPI00501657 RefSeq:NP_955851.1 UniGene:Dr.76721
ProteinModelPortal:Q6NX08 STRING:Q6NX08 PRIDE:Q6NX08 DNASU:321652
Ensembl:ENSDART00000012903 GeneID:321652 KEGG:dre:321652
InParanoid:Q6NX08 NextBio:20807472 Bgee:Q6NX08 Uniprot:Q6NX08
Length = 422
Score = 252 (93.8 bits), Expect = 3.5e-21, P = 3.5e-21
Identities = 49/125 (39%), Positives = 74/125 (59%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G K + + ++ + + S S D +++WD K G++V + +SH WV +V
Sbjct: 292 TLSGSK-VFNCISYSPLCRRLASGSTDRHVRLWDPR---SKDGSLVLLSLTSHNGWVTAV 347
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
RW+P VS S DN VKLWD RS K PL+D+ HEDKV+C +W++ I+SGG DN
Sbjct: 348 RWAPSHEHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGADNK 407
Query: 166 VRVFK 170
+ ++
Sbjct: 408 LYTYR 412
Score = 248 (92.4 bits), Expect = 9.9e-21, P = 9.9e-21
Identities = 56/140 (40%), Positives = 81/140 (57%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
Q+ L +TPL+TL GH EA+S+V W DE+ ++SWDHT+++WDAE GG K ST S
Sbjct: 241 QMGLTRTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQK------STLS 294
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSP--KVPLFDMLGHEDKVMCVNW--S 152
K + + +SP+ +L S S D V+LWD RS + L + H V V W S
Sbjct: 295 GSKVF-NCISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPS 352
Query: 153 DYRYIMSGGQDNSVRVFKTK 172
++SG DN V+++ T+
Sbjct: 353 HEHQLVSGSLDNVVKLWDTR 372
>UNIPROTKB|A8XL02 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 EMBL:HE600904 HAMAP:MF_03029
ProteinModelPortal:A8XL02 STRING:A8XL02 EnsemblMetazoa:CBG14922
WormBase:CBG14922 HOGENOM:HOG000154844 Uniprot:A8XL02
Length = 446
Score = 235 (87.8 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 47/125 (37%), Positives = 77/125 (61%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE-WVQSVR 106
+KG K S + +I+S D +++D + + GA+VK +F H+ WV+SV+
Sbjct: 325 IKGPKSFTSIDIHPTSNLLISSCTDAIPRLYDPK---NRDGAMVKQSFIGHQNGWVESVK 381
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV 166
W+P+D FVS S D + K+WD+RS K LFD+ GHED+++C W++ I +G D S+
Sbjct: 382 WNPVDENQFVSVSTDKTAKMWDVRSSKSSLFDIHGHEDRILCAAWNE-GLIATGSADCSI 440
Query: 167 RVFKT 171
++F+T
Sbjct: 441 KIFET 445
Score = 115 (45.5 bits), Expect = 0.00011, P = 0.00011
Identities = 36/143 (25%), Positives = 64/143 (44%)
Query: 42 KTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
K P++T+ GH++ +S+V W + SWDHT+ WD EL G S K
Sbjct: 276 KVPMVTIGGHRDKVSSVVWCPWKSGHAFSCSWDHTVVQWDLELAGEV------SRIKGPK 329
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLF--DMLGHEDK-VMCVNWS--DY 154
+ S+ P L +S+ D +L+D ++ + +GH++ V V W+ D
Sbjct: 330 SFT-SIDIHPTS-NLLISSCTDAIPRLYDPKNRDGAMVKQSFIGHQNGWVESVKWNPVDE 387
Query: 155 RYIMSGGQDNSVRVFKTKHQPKS 177
+S D + +++ + S
Sbjct: 388 NQFVSVSTDKTAKMWDVRSSKSS 410
>WB|WBGene00018893 [details] [associations]
symbol:tag-345 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0007276 "gamete
generation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0005654 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035
GO:GO:0040019 GO:GO:0070545 GO:GO:0000463 GO:GO:0007276
InterPro:IPR012972 Pfam:PF08154 EMBL:FO081477 KO:K14863
HAMAP:MF_03029 GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844
PIR:T29587 RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 229 (85.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 44/125 (35%), Positives = 77/125 (61%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE-WVQSVR 106
+KG K S D +I+S D +++D + + G++VK +F H+ WV++V+
Sbjct: 318 IKGPKSFTSIDLHPKSDLLISSCTDAIPRLYDPK---NRDGSMVKQSFIGHQNGWVEAVK 374
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV 166
W+P+D FVS S D + K+WD+RS K LFD+ GH+D+++C W++ I +G D ++
Sbjct: 375 WNPLDTNQFVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNE-GLIATGSADCTI 433
Query: 167 RVFKT 171
++F+T
Sbjct: 434 KIFET 438
Score = 125 (49.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
K P++T+ GH++ +SAV+W + + SWDHT+ WD EL G I S K
Sbjct: 269 KVPMVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAG----EI--SRIKGPK 322
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLF--DMLGHEDK-VMCVNWS--DY 154
+ S+ P L +S+ D +L+D ++ + +GH++ V V W+ D
Sbjct: 323 SFT-SIDLHP-KSDLLISSCTDAIPRLYDPKNRDGSMVKQSFIGHQNGWVEAVKWNPLDT 380
Query: 155 RYIMSGGQDNSVRVFKTKHQPKS 177
+S D + +++ + S
Sbjct: 381 NQFVSVSTDKTAKMWDVRSSKSS 403
>UNIPROTKB|P91343 [details] [associations]
symbol:tag-345 "Ribosome biogenesis protein WDR12 homolog"
species:6239 "Caenorhabditis elegans" [GO:0070545 "PeBoW complex"
evidence=ISS] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0005654
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0040035 GO:GO:0040019
GO:GO:0070545 GO:GO:0000463 GO:GO:0007276 InterPro:IPR012972
Pfam:PF08154 EMBL:FO081477 KO:K14863 HAMAP:MF_03029
GeneTree:ENSGT00640000091456 HOGENOM:HOG000154844 PIR:T29587
RefSeq:NP_491655.1 ProteinModelPortal:P91343 SMR:P91343
STRING:P91343 PaxDb:P91343 EnsemblMetazoa:F55F8.5.1
EnsemblMetazoa:F55F8.5.2 GeneID:172226 KEGG:cel:CELE_F55F8.5
UCSC:F55F8.5.1 CTD:172226 WormBase:F55F8.5 InParanoid:P91343
OMA:FEFLVGE NextBio:874587 Uniprot:P91343
Length = 439
Score = 229 (85.7 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 44/125 (35%), Positives = 77/125 (61%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE-WVQSVR 106
+KG K S D +I+S D +++D + + G++VK +F H+ WV++V+
Sbjct: 318 IKGPKSFTSIDLHPKSDLLISSCTDAIPRLYDPK---NRDGSMVKQSFIGHQNGWVEAVK 374
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV 166
W+P+D FVS S D + K+WD+RS K LFD+ GH+D+++C W++ I +G D ++
Sbjct: 375 WNPLDTNQFVSVSTDKTAKMWDVRSSKSSLFDIHGHDDRILCATWNE-GLIATGSADCTI 433
Query: 167 RVFKT 171
++F+T
Sbjct: 434 KIFET 438
Score = 125 (49.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 38/143 (26%), Positives = 67/143 (46%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
K P++T+ GH++ +SAV+W + + SWDHT+ WD EL G I S K
Sbjct: 269 KVPMVTIGGHRDKVSAVEWCPWNSGHAFSCSWDHTIVEWDLELAG----EI--SRIKGPK 322
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLF--DMLGHEDK-VMCVNWS--DY 154
+ S+ P L +S+ D +L+D ++ + +GH++ V V W+ D
Sbjct: 323 SFT-SIDLHP-KSDLLISSCTDAIPRLYDPKNRDGSMVKQSFIGHQNGWVEAVKWNPLDT 380
Query: 155 RYIMSGGQDNSVRVFKTKHQPKS 177
+S D + +++ + S
Sbjct: 381 NQFVSVSTDKTAKMWDVRSSKSS 403
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 218 (81.8 bits), Expect = 3.8e-17, P = 3.8e-17
Identities = 49/141 (34%), Positives = 73/141 (51%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
+TP+ TLKGH + V W+ E+I T S D+T+++WD K G + H +
Sbjct: 176 QTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDP-----KSGQCLGDALRGHSK 230
Query: 101 WVQSVRWSPID-------PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD 153
W+ S+ W PI P+L S+S D ++K+WD S +V + M GH + V CV W
Sbjct: 231 WITSLSWEPIHLVKPGSKPRL-ASSSKDGTIKIWDTVS-RVCQYTMSGHTNSVSCVKWGG 288
Query: 154 YRYIMSGGQDNSVRVFKTKHQ 174
+ SG D +VRV+ Q
Sbjct: 289 QGLLYSGSHDRTVRVWDINSQ 309
Score = 203 (76.5 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 47/133 (35%), Positives = 83/133 (62%)
Query: 40 LQKT-PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
L+ T P+ + GH++ ++ V ++ I+++S+D+++K+WD + G + STF
Sbjct: 389 LKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDG-----RDGKFI-STFRG 442
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V WS D +L VS S D ++K+WD+R+ K+ + D+ GH+D+V V+WS D +
Sbjct: 443 HVASVYQVAWSS-DCRLLVSCSKDTTLKVWDVRTRKLSV-DLPGHKDEVYTVDWSVDGKR 500
Query: 157 IMSGGQDNSVRVF 169
+ SGG+D VR++
Sbjct: 501 VCSGGKDKMVRLW 513
Score = 146 (56.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 42/121 (34%), Positives = 66/121 (54%)
Query: 53 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDP 112
E I + + ++T+S D+T+ +W+ L K I + T H++ V V +SP D
Sbjct: 361 EKICKKNGNSEEMMVTASDDYTMFLWNP-LKSTKP--IARMT--GHQKLVNHVAFSP-DG 414
Query: 113 QLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKT 171
+ VSASFDNS+KLWD R K + GH V V WS D R ++S +D +++V+
Sbjct: 415 RYIVSASFDNSIKLWDGRDGKF-ISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Query: 172 K 172
+
Sbjct: 474 R 474
Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/118 (28%), Positives = 54/118 (45%)
Query: 48 LKGHKEAI--SAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+ GH I SA ++T + D+T +IWD + T H WV V
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDT------QTPMHTLKGHYNWVLCV 192
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNWSDYRYIMSGGQ 162
WSP D ++ + S DN+++LWD +S + L D L GH + ++W + G +
Sbjct: 193 SWSP-DGEVIATGSMDNTIRLWDPKSGQC-LGDALRGHSKWITSLSWEPIHLVKPGSK 248
Score = 125 (49.1 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/88 (30%), Positives = 48/88 (54%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S + H + ++P V+ + DN+ ++WD + + P+ + GH + V+CV+WS
Sbjct: 137 SAIAGHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDT-QTPMHTLKGHYNWVLCVSWS 195
Query: 153 -DYRYIMSGGQDNSVRVFKTKHQPKSGQ 179
D I +G DN++R++ PKSGQ
Sbjct: 196 PDGEVIATGSMDNTIRLW----DPKSGQ 219
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 203 (76.5 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 49/127 (38%), Positives = 73/127 (57%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GHKE IS + W+ ++I S S D T+KIWD E G M K T HKE+V V
Sbjct: 83 TLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVK------TLKGHKEYVFGV 136
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD +V++WD+ + + + H D V V+++ D ++SG D
Sbjct: 137 SFNP-QSNLIVSGSFDENVRIWDVNTGECTKM-ISAHSDPVTGVHFNRDGTLVVSGSYDG 194
Query: 165 SVRVFKT 171
+VR++ T
Sbjct: 195 TVRIWDT 201
Score = 175 (66.7 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 44/125 (35%), Positives = 74/125 (59%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH ++IS+V+++ + + S S D T+KIW A G ++ T HKE + +
Sbjct: 41 TLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFER------TLEGHKEGISDI 94
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D +L SAS D ++K+WD+ S K+ + + GH++ V V+++ I+SG D
Sbjct: 95 AWSQ-DSKLICSASDDKTIKIWDVESGKM-VKTLKGHKEYVFGVSFNPQSNLIVSGSFDE 152
Query: 165 SVRVF 169
+VR++
Sbjct: 153 NVRIW 157
Score = 151 (58.2 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 41/134 (30%), Positives = 72/134 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGHKE + V + +I S S+D ++IWD G K S+H + V V
Sbjct: 125 TLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTK------MISAHSDPVTGV 178
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHED--KVMCVNWS-DYRYIMSGGQ 162
++ D L VS S+D +V++WD + + L + + ED +V V +S + +++++G
Sbjct: 179 HFNR-DGTLVVSGSYDGTVRIWDTTTGQ--LLNTISTEDGKEVSFVKFSPNGKFVLAGTL 235
Query: 163 DNSVRVFKTKHQPK 176
DN++R++ + K
Sbjct: 236 DNTLRLWSYNNNKK 249
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 32/128 (25%), Positives = 68/128 (53%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+ H + ++ V + ++ S S+D T++IWD G + ST KE V V+
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTI---ST-EDGKE-VSFVK 222
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-----RYIMSGG 161
+SP + + ++ + DN+++LW + K L GH+++ C+ +S + ++I++G
Sbjct: 223 FSP-NGKFVLAGTLDNTLRLWSYNNNKKCLKTYTGHKNEKYCI-FSTFSVTCGKWIVTGS 280
Query: 162 QDNSVRVF 169
+DN + ++
Sbjct: 281 EDNLIYIY 288
Score = 107 (42.7 bits), Expect = 0.00071, P = 0.00071
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 90 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV 149
I+K T H + + SV++SP D + SAS D ++K+W K + GH++ + +
Sbjct: 37 ILKYTLKGHLKSISSVKFSP-DGKWLASASADKTIKIWGAYDGKFER-TLEGHKEGISDI 94
Query: 150 NWS-DYRYIMSGGQDNSVRVF 169
WS D + I S D +++++
Sbjct: 95 AWSQDSKLICSASDDKTIKIW 115
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 206 (77.6 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 54/157 (34%), Positives = 88/157 (56%)
Query: 20 ALLTLTNIEVTSLPSFFQLIL---QKT--PLITLKGHKEAISAVQWTAVDEII-TSSWDH 73
A L + + S QLIL QK+ P+ + GH++ ++ ++ I T+S+D
Sbjct: 352 ACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDS 411
Query: 74 TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133
++++WD K G + +T H V WS D +L VS+S D ++K+WD+RS K
Sbjct: 412 SVRLWDG-----KTGKFL-ATLRGHVAAVYQCAWST-DSRLLVSSSQDTTLKVWDVRSKK 464
Query: 134 VPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+ FD+ GHED+V V+WS D + + SGG D +VR++
Sbjct: 465 MK-FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 205 (77.2 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
+TP+ T+KGH +S V W II T S D+T++ WD KKG+ + H +
Sbjct: 167 QTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDP-----KKGSPIGDALRRHTK 221
Query: 101 WVQSVRWSPID------PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154
+ ++ W P+ P L S S DN+V++W+++ + LF + GH + CV W
Sbjct: 222 PIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKL-RTLLFTLSGHTAPITCVRWGGQ 280
Query: 155 RYIMSGGQDNSVRVFKTK 172
+I S D ++R++ K
Sbjct: 281 NWIYSSSYDKTIRIWDAK 298
Score = 124 (48.7 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 52 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPID 111
KE A + + ++++S D L +WD + I K H++ V +SP D
Sbjct: 347 KERYEACLKQSGERLVSASDDLQLILWDPQ---KSTKPITK--MHGHQKVVNHASFSP-D 400
Query: 112 PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFK 170
+ +ASFD+SV+LWD ++ K L + GH V WS D R ++S QD +++V+
Sbjct: 401 GRCIATASFDSSVRLWDGKTGKF-LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWD 459
Query: 171 TK 172
+
Sbjct: 460 VR 461
Score = 116 (45.9 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 41/166 (24%), Positives = 75/166 (45%)
Query: 18 VGALLTLTNIEVTSLPSFFQLILQKT----PLITLKGHKEAISAVQ---WTAV-DEIITS 69
+ +LL N V L + +L+ + P H++ +Q +T+V +
Sbjct: 44 LASLLVPGNSSVRQLEALLNQLLENSDDPVPYNFALHHEDETIEIQDNLYTSVFHNGLMK 103
Query: 70 SWDHTLKIWDAELGGMKKGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 127
+ DH ++ + + A+ + T S H + S ++SP V+ S D + +LW
Sbjct: 104 TEDHLTLLYTPQ-AVFRVRAVTRCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLW 162
Query: 128 DLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTK 172
D + + P+ M GH + V CV W+ D I +G DN++R + K
Sbjct: 163 DCDT-QTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPK 207
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 202 (76.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 43/154 (27%), Positives = 82/154 (53%)
Query: 30 TSLPSFFQLILQKTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKK 87
T++ +F + + TPL + GH A+ W+ +++ + +W+ + GG K
Sbjct: 203 TAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWEPQEGGTWK 262
Query: 88 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKV 146
I + FSSH + V+ ++WSP + +F S S D S+++WD+R+P + H V
Sbjct: 263 --IDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSMLSANEAHSSDV 320
Query: 147 MCVNWSDYR-YIMSGGQDNSVRVFKTKHQPKSGQ 179
++W+ +I+SGG D ++V+ + Q +SG+
Sbjct: 321 NVISWNRTEPFILSGGDDGLLKVWDLR-QFQSGR 353
Score = 132 (51.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/99 (32%), Positives = 47/99 (47%)
Query: 49 KGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+ H ++ + W + I S D LK+WD L + G V S F H V SV+W
Sbjct: 314 EAHSSDVNVISWNRTEPFILSGGDDGLLKVWD--LRQFQSGRPVAS-FKQHSAPVTSVQW 370
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKV 146
SP+D +F ++ D+ + WDL V DM G + V
Sbjct: 371 SPVDSSVFAASGADDVISQWDL---SVESCDMGGQAEDV 406
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 200 (75.5 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 46/137 (33%), Positives = 75/137 (54%)
Query: 43 TPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
TPL TLKGH + AV ++ +I T S D+T++IWDA KKG + + H +W
Sbjct: 182 TPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDA-----KKGQALGAPLKGHVKW 236
Query: 102 VQSVRWSPID------PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR 155
+ S+ W P P+L SAS D++V++WD+ S + + + GH+ V CV W
Sbjct: 237 ITSLAWEPYHLQQSGHPRL-ASASKDSTVRIWDVISKRADIV-LSGHKGSVTCVRWGGTG 294
Query: 156 YIMSGGQDNSVRVFKTK 172
I + D +++V+ ++
Sbjct: 295 KIYTSSHDRTIKVWNSQ 311
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 38/129 (29%), Positives = 78/129 (60%)
Query: 44 PLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ L GH++ ++ V ++ + I ++ +D+ +K+W+ + G + +T H V
Sbjct: 397 PVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNG-----RDGKFI-TTLRGHVGAV 450
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
+S D +L VS+S D ++K+W++R+ K+ D+ GH+D+V V+WS D + + SGG
Sbjct: 451 YQCCFSA-DSRLLVSSSKDTTLKVWNVRTGKLSE-DLPGHKDEVFAVDWSPDGQKVGSGG 508
Query: 162 QDNSVRVFK 170
+D ++R+++
Sbjct: 509 KDKAIRIWR 517
Score = 142 (55.0 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 47 TLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
++ GH EAI A ++ V +++ S D T +IWD + G T H WV +
Sbjct: 143 SIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG------TPLHTLKGHTSWVLA 196
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSG---- 160
V +SP + + + S DN+V++WD + + + GH + + W Y SG
Sbjct: 197 VSYSP-NGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRL 255
Query: 161 ---GQDNSVRVF 169
+D++VR++
Sbjct: 256 ASASKDSTVRIW 267
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 43 TPLITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
T + TL H ++ + + D I+ +++ DHT K+ +++ K A+ K F E
Sbjct: 314 TLIQTLSAHAHRVNHLA-LSTDFILRTAYHDHTGKVPESDAD---KVAMAKKRF----EK 365
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSG 160
++ + I +L VSAS D ++ LWD S P+ +LGH+ +V V +S D YI S
Sbjct: 366 AATIN-NKIVEKL-VSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASA 423
Query: 161 GQDNSVRVF 169
G DN V+++
Sbjct: 424 GFDNHVKLW 432
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
++ + H E + + +SP+ VS S D++ ++WD + PL + GH V+ V++S
Sbjct: 142 ASIAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG-TPLHTLKGHTSWVLAVSYS 200
Query: 153 -DYRYIMSGGQDNSVRVFKTK 172
+ I +G DN+VR++ K
Sbjct: 201 PNGAMIATGSMDNTVRIWDAK 221
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 192 (72.6 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 14 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 67
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 68 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 125
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 126 SVRIWDVK 133
Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 56 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 109
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 110 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 167
Query: 165 SVRVFKT 171
R++ T
Sbjct: 168 LCRIWDT 174
Score = 143 (55.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 138 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 192
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 193 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 251 GSEDNLVYIW 260
Score = 125 (49.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 149
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 150 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 207
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 208 LDNTLKLW 215
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 143 (55.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 40/130 (30%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L GH+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 192 (72.6 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 50/128 (39%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+S+V+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 93
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D L VSAS D ++K+WD+ S K L + GH + V C N++ I+SG D
Sbjct: 94 AWSS-DSNLLVSASDDKTLKIWDVSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 151
Query: 165 SVRVFKTK 172
SVR++ K
Sbjct: 152 SVRIWDVK 159
Score = 171 (65.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/127 (35%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLKIWD G K T H +V
Sbjct: 82 TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK------TLKGHSNYVFCC 135
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ K L + H D V V+++ D I+S D
Sbjct: 136 NFNP-QSNLIVSGSFDESVRIWDVKTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 193
Query: 165 SVRVFKT 171
R++ T
Sbjct: 194 LCRIWDT 200
Score = 134 (52.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/130 (30%), Positives = 68/130 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + +SAV + I++SS+D +IWD G +K+ V
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA-----SGQCLKTLIDDDNPPVS 218
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMS 159
V++SP + + ++A+ DN++KLWD K L H+++ C+ N+S ++I+S
Sbjct: 219 FVKFSP-NGKYILAATLDNTLKLWDYSKGKC-LKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 277 GSEDNLVYIW 286
Score = 125 (49.1 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/128 (28%), Positives = 70/128 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD +K G +K T +H + V
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD-----VKTGKCLK-TLPAHSDPVS 175
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 176 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 233
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 234 LDNTLKLW 241
>TAIR|locus:2180952 [details] [associations]
symbol:AT5G15550 "AT5G15550" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005730 "nucleolus" evidence=IDA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0000478 "endonucleolytic cleavage involved in rRNA processing"
evidence=RCA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006606 "protein import into nucleus" evidence=RCA] [GO:0006626
"protein targeting to mitochondrion" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 EMBL:AL391143
HSSP:P16649 GO:GO:0080008 InterPro:IPR012972 Pfam:PF08154 KO:K14863
HOGENOM:HOG000264464 OMA:DCTINLW EMBL:AY064011 EMBL:AY091257
IPI:IPI00525355 PIR:T51533 RefSeq:NP_197059.1 UniGene:At.27103
ProteinModelPortal:Q9LF27 SMR:Q9LF27 STRING:Q9LF27 PaxDb:Q9LF27
PRIDE:Q9LF27 EnsemblPlants:AT5G15550.1 GeneID:831408
KEGG:ath:AT5G15550 TAIR:At5g15550 InParanoid:Q9LF27
PhylomeDB:Q9LF27 ProtClustDB:CLSN2687473 ArrayExpress:Q9LF27
Genevestigator:Q9LF27 Uniprot:Q9LF27
Length = 433
Score = 153 (58.9 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 72 DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRS 131
D L++WD G FSSH W+ + +W +SAS+D + LWDLR+
Sbjct: 334 DPILRVWDPRKPGTSAPVF---QFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWDLRT 390
Query: 132 PKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRV 168
PL + H DKV+ +W ++SGG D+++R+
Sbjct: 391 AW-PLSVIDTHNDKVLSADWWKGESVVSGGADSNLRI 426
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 33/127 (25%), Positives = 59/127 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+L GH + +S+V W D I +SSWDH+++ WD E G K ++ + F + +V
Sbjct: 267 SLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRWDVETG---KDSL--NLFCGKA--LNTVD 319
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSP--KVPLFDMLGHEDKVMCVNW--SDYRYIMSGGQ 162
L + D +++WD R P P+F H + W S + +++S
Sbjct: 320 VGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 163 DNSVRVF 169
D + ++
Sbjct: 380 DGKIMLW 386
Score = 64 (27.6 bits), Expect = 8.5e-15, Sum P(2) = 8.5e-15
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 48 LKGHKEAISAVQWTAVDEII-TSSWDHTLKIWD 79
L+GHK ++ +V ++ +SSWD T+ +W+
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWN 233
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 190 (71.9 bits), Expect = 9.4e-15, P = 9.4e-15
Identities = 38/134 (28%), Positives = 72/134 (53%)
Query: 44 PLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ + + H + + +V W V D IT SWD ++KIW+ + K TF H+
Sbjct: 96 PIKSFEEHTKEVYSVDWNLVTKDTFITGSWDQSIKIWNPRMDRSLK------TFREHRYC 149
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMS 159
+ S WSP + LF S S D ++K+WD R + L + H+ +++ +W+ Y + +++
Sbjct: 150 IYSAIWSPRNAHLFASVSGDRTLKIWDSRDNR-SLNTIKAHDHEILTCDWNKYNDKEVVT 208
Query: 160 GGQDNSVRVFKTKH 173
G D ++R++ ++
Sbjct: 209 GSVDKTIRIWDIRY 222
Score = 119 (46.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 30/111 (27%), Positives = 53/111 (47%)
Query: 45 LITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T+K H I W + E++T S D T++IWD + I++ H V
Sbjct: 183 LNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPD-RPTTILRG----HTYAV 237
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS 152
+ ++ SP + S S+D SV +WD + P+ + H + V+ ++W+
Sbjct: 238 RRIKCSPHSESMLASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGLDWN 288
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 45 LITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T + H+ I + W+ + + S S D TLKIWD+ ++ +T +H +
Sbjct: 140 LKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSR----DNRSL--NTIKAHDHEI 193
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM--SG 160
+ W+ + + V+ S D ++++WD+R P P + GH V + S + M S
Sbjct: 194 LTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYAVRRIKCSPHSESMLASC 253
Query: 161 GQDNSVRVF 169
D SV V+
Sbjct: 254 SYDMSVIVW 262
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 195 (73.7 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 45/131 (34%), Positives = 78/131 (59%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ I+ S S+D ++K+WD G K A ++ H
Sbjct: 362 KKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG--KYLASLRG----HVA 415
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ + D+ GH D+V V+WS D + + S
Sbjct: 416 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAM-DLPGHADEVYAVDWSPDGQRVAS 473
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 474 GGKDKCLRIWR 484
Score = 166 (63.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 43/165 (26%), Positives = 79/165 (47%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T KGH+ + ++ W+ + S
Sbjct: 118 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCKGHRHWVLSISWSPDGRKLASG 174
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL-FV-SASFDNSVK 125
+ + +WD G K+ V T + H +W+ + W P+ +P+ +V S+S D SV+
Sbjct: 175 CKNGQILLWDPSTG--KQ---VGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 230 IWDTTAGRCERI-LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 273
Score = 150 (57.9 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 64 DEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+ +++ S D TL +W AE K + + T H+ + V +SP D ++ SASFD
Sbjct: 342 ERLVSGSDDFTLFLWSPAE----DKKPLTRMT--GHQALINQVLFSP-DSRIVASASFDK 394
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQ 174
S+KLWD R+ K L + GH V + WS D R ++SG D++++V+ K Q
Sbjct: 395 SIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 143 (55.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCKGHRHWVLSI 162
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + + LWD + K + GH + ++W + RY+ S
Sbjct: 163 SWSP-DGRKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVAS 221
Query: 160 GGQDNSVRVFKT 171
+D SVR++ T
Sbjct: 222 SSKDGSVRIWDT 233
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S+ H E V SV +SP L S S D +V+ WDL S + P F GH V+ ++WS
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYL-ASGSGDTTVRFWDL-STETPHFTCKGHRHWVLSISWS 165
Query: 153 -DYRYIMSGGQDNSVRVFKTKHQPKSGQK 180
D R + SG ++ + ++ P +G++
Sbjct: 166 PDGRKLASGCKNGQILLW----DPSTGKQ 190
Score = 78 (32.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH ++++ ++W + ++S D T+K+W A G ++ T H WV ++
Sbjct: 242 LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG------VLCRTLQGHGHWVNTMAL 295
Query: 108 S 108
S
Sbjct: 296 S 296
Score = 77 (32.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 112 PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
P+ VS S D ++ LW K PL M GH+ + V +S D R + S D S++++
Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLW 399
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 193 (73.0 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 46/131 (35%), Positives = 77/131 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ II S S+D ++K+WD G K A ++ H
Sbjct: 313 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG--KYLASLRG----HVA 366
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ D+ GH D+V V+WS D + + S
Sbjct: 367 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAA-DLPGHADEVYAVDWSPDGQRVAS 424
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 425 GGKDKCLRIWR 435
Score = 159 (61.0 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T +GH+ + ++ W+ + + S
Sbjct: 69 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCQGHRHWVLSISWSPDGKTLASG 125
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL--FVSASFDNSVK 125
+ + +WD G K+ V + H +W+ + W P+ +P+ S+S D SV+
Sbjct: 126 CKNGQILLWDPSTG--KQ---VGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVR 180
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 181 VWDTTAGRCERI-LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 224
Score = 150 (57.9 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 40/113 (35%), Positives = 63/113 (55%)
Query: 64 DEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+ +++ S D TL +W AE K + + T H+ + V +SP D ++ SASFD
Sbjct: 293 ERLVSGSDDFTLFMWSPAE----DKKPLARMT--GHQALINQVLFSP-DSRIIASASFDK 345
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQ 174
S+KLWD R+ K L + GH V + WS D R ++SG D++++V+ K Q
Sbjct: 346 SIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 397
Score = 141 (54.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 60 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCQGHRHWVLSI 113
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + + LWD + K + GH + ++W + RY+ S
Sbjct: 114 SWSP-DGKTLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMAS 172
Query: 160 GGQDNSVRVFKT 171
+D SVRV+ T
Sbjct: 173 SSKDGSVRVWDT 184
Score = 108 (43.1 bits), Expect = 0.00083, P = 0.00083
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S+ H E V SV +SP L S S D +V+ WDL S + P F GH V+ ++WS
Sbjct: 59 SSLEGHSEAVISVAFSPTGKYL-ASGSGDTTVRFWDL-STETPHFTCQGHRHWVLSISWS 116
Query: 153 -DYRYIMSGGQDNSVRVFKTKHQPKSGQK 180
D + + SG ++ + ++ P +G++
Sbjct: 117 PDGKTLASGCKNGQILLW----DPSTGKQ 141
Score = 78 (32.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH ++++ ++W + ++S D T+K+W A G ++ T H WV ++
Sbjct: 193 LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDG------VLCRTLQGHGHWVNTMAL 246
Query: 108 S 108
S
Sbjct: 247 S 247
Score = 76 (31.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 112 PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
P+ VS S D ++ +W K PL M GH+ + V +S D R I S D S++++
Sbjct: 292 PERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW 350
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 193 (73.0 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 46/131 (35%), Positives = 77/131 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ II S S+D ++K+WD G K A ++ H
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTG--KYLASLRG----HVA 415
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ D+ GH D+V V+WS D + + S
Sbjct: 416 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAA-DLPGHADEVYAVDWSPDGQRVAS 473
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 474 GGKDKCLRIWR 484
Score = 158 (60.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 41/165 (24%), Positives = 80/165 (48%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T +GH+ + ++ W+ + + S
Sbjct: 118 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCQGHRHWVLSISWSPDGKKLASG 174
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL-FV-SASFDNSVK 125
+ + +WD G K+ V + H +W+ ++ W P+ +P+ +V S+S D SV+
Sbjct: 175 CKNGQILLWDPSTG--KQ---VGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 230 VWDTTAGRCERI-LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 273
Score = 154 (59.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 41/119 (34%), Positives = 66/119 (55%)
Query: 58 VQWTAVDEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 116
V+ ++ +++ S D TL +W AE K + + T H+ + V +SP D ++
Sbjct: 336 VRGRGLERLVSGSDDFTLFLWSPAE----DKKPLARMT--GHQALINQVLFSP-DSRIIA 388
Query: 117 SASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQ 174
SASFD S+KLWD R+ K L + GH V + WS D R ++SG D++++V+ K Q
Sbjct: 389 SASFDKSIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 146 (56.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCQGHRHWVLSI 162
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + + LWD + K + GH + ++W + RY+ S
Sbjct: 163 SWSP-DGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVAS 221
Query: 160 GGQDNSVRVFKT 171
+D SVRV+ T
Sbjct: 222 SSKDGSVRVWDT 233
Score = 111 (44.1 bits), Expect = 0.00041, P = 0.00041
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 38 LILQKTPL-ITLKGHK-EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF 95
L+ Q+ PL + H E IS++ T + + + + L I + A+ + T
Sbjct: 51 LLAQEDPLPLAFYVHDAEIISSLGKTLESQAVET--EKVLDIIYQPQAVFRVRAVTRCTS 108
Query: 96 S--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS- 152
S H E V SV +SP L S S D +V+ WDL S + P F GH V+ ++WS
Sbjct: 109 SLEGHSEAVISVAFSPTGKYL-ASGSGDTTVRFWDL-STETPHFTCQGHRHWVLSISWSP 166
Query: 153 DYRYIMSGGQDNSVRVFKTKHQPKSGQK 180
D + + SG ++ + ++ P +G++
Sbjct: 167 DGKKLASGCKNGQILLW----DPSTGKQ 190
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 192 (72.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 45/131 (34%), Positives = 77/131 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ I+ S S+D ++K+WD G K A ++ H
Sbjct: 362 KKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG--KYLASLRG----HVA 415
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ D+ GH D+V V+WS D + + S
Sbjct: 416 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLAT-DLPGHADEVYAVDWSPDGQRVAS 473
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 474 GGKDKCLRIWR 484
Score = 164 (62.8 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 42/165 (25%), Positives = 80/165 (48%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T KGH+ + ++ W+ + + S
Sbjct: 118 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCKGHRHWVLSISWSPDGKKLASG 174
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL-FV-SASFDNSVK 125
+ + +WD G ++ G T + H +W+ + W P+ +P+ +V S+S D SV+
Sbjct: 175 CKNGQVLLWDPSTG-LQVGR----TLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 230 VWDTTAGRCERI-LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 273
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 46/134 (34%), Positives = 72/134 (53%)
Query: 47 TLKGHKEAISA----VQWTAVDEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEW 101
+LK KE S+ V+ + +++ S D TL +W AE K + + T H+
Sbjct: 321 SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLARMT--GHQAL 374
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSG 160
+ V +SP D ++ SASFD S+KLWD R+ K L + GH V + WS D R ++SG
Sbjct: 375 INQVLFSP-DSRIVASASFDKSIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSG 432
Query: 161 GQDNSVRVFKTKHQ 174
D++++V+ K Q
Sbjct: 433 SSDSTLKVWDVKAQ 446
Score = 138 (53.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 109 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCKGHRHWVLSI 162
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + V LWD + + GH + ++W + RY+ S
Sbjct: 163 SWSP-DGKKLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 221
Query: 160 GGQDNSVRVFKT 171
+D SVRV+ T
Sbjct: 222 SSKDGSVRVWDT 233
Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00097
Identities = 28/75 (37%), Positives = 40/75 (53%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S+ H E V SV +SP L S S D +V+ WDL S + P F GH V+ ++WS
Sbjct: 108 SSLEGHSEAVISVAFSPTGKYL-ASGSGDTTVRFWDL-STETPHFTCKGHRHWVLSISWS 165
Query: 153 -DYRYIMSGGQDNSV 166
D + + SG ++ V
Sbjct: 166 PDGKKLASGCKNGQV 180
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 192 (72.6 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 45/131 (34%), Positives = 77/131 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ +I S S+D ++K+WD G K A ++ H
Sbjct: 363 KKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTG--KYLASLRG----HVA 416
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ D+ GH D+V V+WS D + + S
Sbjct: 417 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLST-DLPGHADEVYAVDWSPDGQRVAS 474
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 475 GGKDKCLRIWR 485
Score = 157 (60.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 41/165 (24%), Positives = 80/165 (48%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T +GH+ + ++ W+ + + S
Sbjct: 119 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCQGHRHWVLSISWSPDGKKLASG 175
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL-FV-SASFDNSVK 125
+ + +WD G K+ V + H +W+ ++ W P+ +P+ +V S+S D SV+
Sbjct: 176 CKNGQILLWDPSTG--KQ---VGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 231 VWDTTAGRCER-TLTGHAQSVTCLRWGGDGLLYSASQDRTIKVWR 274
Score = 150 (57.9 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 41/116 (35%), Positives = 64/116 (55%)
Query: 64 DEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+ +++ S D TL +W AE K + + T H+ + V +SP D ++ SASFD
Sbjct: 343 ERLVSGSDDFTLFLWSPAE----DKKPLARMT--GHQALINQVVFSP-DSRVIASASFDK 395
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKS 177
S+KLWD R+ K L + GH V + WS D R ++SG D++++V+ K Q S
Sbjct: 396 SIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLS 450
Score = 146 (56.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 38/132 (28%), Positives = 62/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 110 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCQGHRHWVLSI 163
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + + LWD + K + GH + ++W + RY+ S
Sbjct: 164 SWSP-DGKKLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVAS 222
Query: 160 GGQDNSVRVFKT 171
+D SVRV+ T
Sbjct: 223 SSKDGSVRVWDT 234
Score = 109 (43.4 bits), Expect = 0.00074, P = 0.00074
Identities = 41/148 (27%), Positives = 71/148 (47%)
Query: 38 LILQKTPL-ITLKGHK-EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTF 95
L+ Q+ PL + H E +S++ T + + + + L I + A+ + T
Sbjct: 52 LLAQEDPLPLAFYVHDAEIVSSLGRTLESQAVET--EKVLDIIYQPQAIFRVRAVTRCTS 109
Query: 96 S--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS- 152
S H E V SV +SP L S S D +V+ WDL S + P F GH V+ ++WS
Sbjct: 110 SLEGHSEAVISVAFSPTGKYL-ASGSGDTTVRFWDL-STETPHFTCQGHRHWVLSISWSP 167
Query: 153 DYRYIMSGGQDNSVRVFKTKHQPKSGQK 180
D + + SG ++ + ++ P +G++
Sbjct: 168 DGKKLASGCKNGQILLW----DPSTGKQ 191
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 192 (72.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 45/131 (34%), Positives = 77/131 (58%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ I+ S S+D ++K+WD G K A ++ H
Sbjct: 364 KKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTG--KYLASLRG----HVA 417
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD+++ K+ D+ GH D+V V+WS D + + S
Sbjct: 418 AVYQIAWSA-DSRLLVSGSSDSTLKVWDVKAQKLTT-DLPGHADEVYAVDWSPDGQRVAS 475
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 476 GGKDKCLRIWR 486
Score = 165 (63.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 42/165 (25%), Positives = 78/165 (47%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T KGH+ + ++ W+ + + S
Sbjct: 120 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPHFTCKGHRHWVLSISWSPDGKKLASG 176
Query: 71 WDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI--DPQL-FV-SASFDNSVK 125
+ + +WD G V T + H +W+ + W P+ +P+ +V S+S D SV+
Sbjct: 177 CKNGQILLWDPSTGTQ-----VGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFK 170
+WD + + + GH V C+ W + S QD +++V++
Sbjct: 232 VWDTTAGRCERI-LTGHTQSVTCLRWGGDGLLYSASQDRTIKVWR 275
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 46/134 (34%), Positives = 72/134 (53%)
Query: 47 TLKGHKEAISA----VQWTAVDEIITSSWDHTLKIWD-AELGGMKKGAIVKSTFSSHKEW 101
+LK KE S+ V+ + +++ S D TL +W AE K + + T H+
Sbjct: 323 SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAE----DKKPLARMT--GHQAL 376
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSG 160
+ V +SP D ++ SASFD S+KLWD R+ K L + GH V + WS D R ++SG
Sbjct: 377 INQVLFSP-DSRIVASASFDKSIKLWDGRTGKY-LASLRGHVAAVYQIAWSADSRLLVSG 434
Query: 161 GQDNSVRVFKTKHQ 174
D++++V+ K Q
Sbjct: 435 SSDSTLKVWDVKAQ 448
Score = 138 (53.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/132 (28%), Positives = 61/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD T H+ WV S+
Sbjct: 111 SLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPHFTCKGHRHWVLSI 164
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S + + LWD + + GH + ++W + RY+ S
Sbjct: 165 SWSP-DGKKLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVAS 223
Query: 160 GGQDNSVRVFKT 171
+D SVRV+ T
Sbjct: 224 SSKDGSVRVWDT 235
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 185 (70.2 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 41/132 (31%), Positives = 68/132 (51%)
Query: 42 KTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
K PLI L+ HK + ++ W +++ SWD TLK+WD ++ +I +TF H
Sbjct: 113 KQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCN----RQNSI--TTFVGH 166
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS--DYR 155
+ + ++SP+ LF S S D + LW+ L PL + H + +C +WS D
Sbjct: 167 NDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWSHFDRN 226
Query: 156 YIMSGGQDNSVR 167
+++GG D +R
Sbjct: 227 VLVTGGSDGLIR 238
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 184 (69.8 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 48/128 (37%), Positives = 72/128 (56%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH +A+SAV+++ E + +SS D +KIW A G +K T S HK + V
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEK------TISGHKLGISDV 120
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDN 164
WS D +L VS S D ++K+W+L + K L + GH + V C N++ I+SG D
Sbjct: 121 AWSS-DSRLLVSGSDDKTLKVWELSTGK-SLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE 178
Query: 165 SVRVFKTK 172
SVR++ +
Sbjct: 179 SVRIWDVR 186
Score = 169 (64.5 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 44/127 (34%), Positives = 65/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GHK IS V W++ ++ S S D TLK+W+ G K T H +V
Sbjct: 109 TISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLK------TLKGHSNYVFCC 162
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+R+ K L + H D V V+++ D I+S D
Sbjct: 163 NFNP-QSNLIVSGSFDESVRIWDVRTGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 220
Query: 165 SVRVFKT 171
R++ T
Sbjct: 221 LCRIWDT 227
Score = 122 (48.0 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 36/128 (28%), Positives = 67/128 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + +I S S+D +++IWD G K T +H + V
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLK------TLPAHSDPVS 202
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYRYIMSGG 161
+V ++ D L VS+S+D ++WD S + L ++ ++ V V +S + +YI++
Sbjct: 203 AVHFNR-DGSLIVSSSYDGLCRIWDTASGQC-LKTLIDDDNPPVSFVKFSPNGKYILAAT 260
Query: 162 QDNSVRVF 169
DN+++++
Sbjct: 261 LDNTLKLW 268
Score = 113 (44.8 bits), Expect = 0.00014, P = 0.00014
Identities = 32/111 (28%), Positives = 59/111 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNS 123
I+ ++ D+TLK+WD KG +K T++ HK ++ +S + VS S DN
Sbjct: 256 ILAATLDNTLKLWD-----YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNM 309
Query: 124 VKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGG---QDNSVRVFKT 171
V +W+L+S +V + + GH D V+C I++ D +++++K+
Sbjct: 310 VYIWNLQSKEV-VQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLWKS 359
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 181 (68.8 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 44 PLITLKGHKEAISAVQWTAV-DE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W+ DE +++ SWD T+K+WD +G TF H+
Sbjct: 98 PLQVYKEHTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSL------CTFRGHES 151
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQAEILSCDWCKYNENLLV 210
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 211 TGAVDCSLR 219
Score = 150 (57.9 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 143 LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVR---IV---IPAHQAEI 196
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 197 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 257 SYDFTVRFWNFSKPDP 272
Score = 130 (50.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 39/122 (31%), Positives = 58/122 (47%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E ++T S D +L++WD G + + H + V SV WS D QL
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDT---AKATGPL--QVYKEHTQEVYSVDWSQTRDEQL 122
Query: 115 FVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFK 170
VS S+D +VK+WD P V L GHE + WS + S D ++R++
Sbjct: 123 VVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 171 TK 172
K
Sbjct: 180 VK 181
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 186 (70.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 45/138 (32%), Positives = 71/138 (51%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
I TP TLKGH + V W+ + I T+ + ++IW + G K+ + ST
Sbjct: 169 IYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTG--KQ---LGSTLKG 223
Query: 98 HKEWVQSVRWSP--IDPQL--FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD 153
H +++ + W P ++P+ S+S D+++++WD S K L + GH V C+ W
Sbjct: 224 HTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCK-NLMSLSGHTMSVTCLKWGG 282
Query: 154 YRYIMSGGQDNSVRVFKT 171
I SG QD +VRVF T
Sbjct: 283 EGLIYSGSQDRTVRVFNT 300
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
KT + L GH++ I+ V ++ S S+D ++K+WD + G F H
Sbjct: 384 KTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFL------GNFRGHVG 437
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V V WS D + VS S D+++K+WD+++ K+ ++ GH D+V V+WS D + S
Sbjct: 438 AVYQVCWSS-DSRYLVSGSKDSTLKIWDIKTKKMEK-ELPGHADEVYTVDWSPDGDRVAS 495
Query: 160 GGQDNSVRVF 169
G +D +R++
Sbjct: 496 GSKDRLLRIW 505
Score = 161 (61.7 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 43/114 (37%), Positives = 68/114 (59%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+I+ S D T+ +W+ + K +I S + H++ + V +SP D + F SASFD S+K
Sbjct: 366 LISGSDDFTVIMWNPSV---TKTSI--SRLTGHQQLINLVSFSP-DGRYFASASFDKSIK 419
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF--KTKHQPK 176
LWD +S K L + GH V V WS D RY++SG +D++++++ KTK K
Sbjct: 420 LWDGQSGKF-LGNFRGHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEK 472
Score = 112 (44.5 bits), Expect = 0.00033, P = 0.00033
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S+ S H E V + +SP D + FVS D +V++WD+ + P + GH + V+ V WS
Sbjct: 134 SSMSGHTEAVLNCAFSP-DGKGFVSVGGDTTVRIWDIYT-STPTHTLKGHTNWVLQVAWS 191
Query: 153 -DYRYIMSGGQDNSVRVF 169
D + I + G + +R++
Sbjct: 192 PDSKKIATAGMEGDIRIW 209
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 180 (68.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 42 KTPLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
K PL K H + +V W T ++++ S SWD T K+WD +G + TF H
Sbjct: 99 KGPLQVYKEHTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGKSLR------TFKGH 152
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RY 156
+ + S WSP P F SAS D ++++WD+++P V L + H+ +++ +W Y
Sbjct: 153 EGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPGVRLV-IPAHQAEILSCDWCKYDENL 211
Query: 157 IMSGGQDNSVR 167
+++G D S++
Sbjct: 212 LVTGAVDCSLK 222
Score = 152 (58.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 44/136 (32%), Positives = 67/136 (49%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T KGH+ I + W+ + S S D TL+IWD + G V+ +H+ +
Sbjct: 146 LRTFKGHEGVIYSTIWSPHIPGCFASASGDQTLRIWDVKAPG------VRLVIPAHQAEI 199
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W D L V+ + D S+K WDLR+ + P+F +LGH V V +S + + S
Sbjct: 200 LSCDWCKYDENLLVTGAVDCSLKGWDLRNVRQPVFILLGHTYAVRRVKFSPFHATLLASC 259
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 260 SYDFTVRFWDFSKPNP 275
Score = 133 (51.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 42/138 (30%), Positives = 64/138 (46%)
Query: 42 KTPLITLKGH--KEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
+T ++ L+ + + V W+ +E +ITSS D +L+IWD KG + +
Sbjct: 53 ETGIVLLRSFDWNDGLFDVTWSENNEHVLITSSGDGSLQIWDI---AKPKGPL--QVYKE 107
Query: 98 HKEWVQSVRWSPI-DPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-- 154
H + SV WS QL VS S+D + KLWD K L GHE + WS +
Sbjct: 108 HTQEAYSVDWSQTRGEQLVVSGSWDQTAKLWDPAVGK-SLRTFKGHEGVIYSTIWSPHIP 166
Query: 155 RYIMSGGQDNSVRVFKTK 172
S D ++R++ K
Sbjct: 167 GCFASASGDQTLRIWDVK 184
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 184 (69.8 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
+TPL T KGHK + V W+ + +++ S + W+ KKG + S + HK+
Sbjct: 141 ETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNP-----KKGELEGSPLTGHKK 195
Query: 101 WVQSVRWSPI---DP-QLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY 156
W+ + W P+ P + FV++S D ++WD+ K + + GH V CV W
Sbjct: 196 WITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKK-SIICLSGHTLAVTCVKWGGDGI 254
Query: 157 IMSGGQDNSVRVFKT 171
I +G QD ++++++T
Sbjct: 255 IYTGSQDCTIKMWET 269
Score = 173 (66.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 43/133 (32%), Positives = 79/133 (59%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
+ K P L GH++ ++ V ++ + I S S+D ++++W+ G+ G V + F H
Sbjct: 348 VSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN----GIT-GQFV-TVFRGH 401
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYI 157
V V WS D +L +S S D+++K+W++R+ K+ D+ GH D+V V+WS D +
Sbjct: 402 VGPVYQVSWSA-DSRLLLSGSKDSTLKIWEIRTKKLKQ-DLPGHADEVFAVDWSPDGEKV 459
Query: 158 MSGGQDNSVRVFK 170
+SGG+D ++++K
Sbjct: 460 VSGGKDRVLKLWK 472
Score = 133 (51.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/111 (29%), Positives = 63/111 (56%)
Query: 64 DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS 123
+ +++ S D T+ +W+ + K + + H++ V V +SP D + SASFD S
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRL-----TGHQQLVNHVYFSP-DGKWIASASFDKS 383
Query: 124 VKLWD-LRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTK 172
V+LW+ + V +F GH V V+WS D R ++SG +D+++++++ +
Sbjct: 384 VRLWNGITGQFVTVFR--GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR 432
Score = 125 (49.1 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS- 152
T + H E V V +SP QL S S D +V+LWDL + + PLF GH++ V+ V WS
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQL-ASGSGDTTVRLWDLYT-ETPLFTCKGHKNWVLTVAWSP 161
Query: 153 DYRYIMSGGQDNSVRVFKTKHQPKSGQ 179
D ++++SG + + + PK G+
Sbjct: 162 DGKHLVSGSKSGEICCWN----PKKGE 184
Score = 116 (45.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GH EA+ V ++ + + S S D T+++WD + + T HK WV +V
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL----YTETPLF--TCKGHKNWVLTV 157
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW------SDYRYIMS 159
WSP D + VS S + W+ + ++ + GH+ + ++W S R ++
Sbjct: 158 AWSP-DGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVT 216
Query: 160 GGQDNSVRVF 169
+D R++
Sbjct: 217 SSKDGDARIW 226
Score = 89 (36.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
I K +I L GH A++ V+W I T S D T+K+W+ +G +++ H
Sbjct: 228 ITLKKSIICLSGHTLAVTCVKWGGDGIIYTGSQDCTIKMWETT-----QGKLIRE-LKGH 281
Query: 99 KEWVQSVRWS 108
W+ S+ S
Sbjct: 282 GHWINSLALS 291
Score = 75 (31.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 112 PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
P+ VS S D ++ LW+ K P + GH+ V V +S D ++I S D SVR++
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLW 387
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 179 (68.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G TF H+
Sbjct: 98 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSL------CTFRGHES 151
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVRIV-IPAHQTEILSCDWCKYNENLVV 210
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 211 TGAVDCSLR 219
Score = 151 (58.2 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 143 LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTAGVR---IV---IPAHQTEI 196
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 197 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 257 SYDFTVRFWNFSKPDP 272
Score = 123 (48.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E ++T S D +L++WD G + + H + V SV WS QL
Sbjct: 68 VTWSEDNEHVLVTCSGDGSLQLWDT---AKATGPL--QVYKEHTQEVYSVDWSQTRGEQL 122
Query: 115 FVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFK 170
VS S+D +VK+WD P V L GHE + WS + S D ++R++
Sbjct: 123 VVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 171 TK 172
K
Sbjct: 180 VK 181
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 179 (68.1 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G TF H+
Sbjct: 98 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSL------CTFRGHES 151
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 152 VIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-IPAHQTEILSCDWCKYNENLVV 210
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 211 TGAVDCSLR 219
Score = 149 (57.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 143 LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVR---IV---IPAHQTEI 196
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 197 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 256
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 257 SYDFTVRFWNFSKPDP 272
Score = 123 (48.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E ++T S D +L++WD G + + H + V SV WS QL
Sbjct: 68 VTWSENNEHVLVTCSGDGSLQLWDT---AKATGPL--QVYKEHTQEVYSVDWSQTRGEQL 122
Query: 115 FVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFK 170
VS S+D +VK+WD P V L GHE + WS + S D ++R++
Sbjct: 123 VVSGSWDQTVKVWD---PTVGNSLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWD 179
Query: 171 TK 172
K
Sbjct: 180 VK 181
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 179 (68.1 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/129 (31%), Positives = 70/129 (54%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G K TF H+
Sbjct: 103 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLC---TFRGHES 156
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD++S V + + H+ +++ +W Y ++
Sbjct: 157 VIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVRIV-VPAHQAEILSCDWCKYNENLLV 215
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 216 TGAVDCSLR 224
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 148 LCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVKSTGVR---IV---VPAHQAEI 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 202 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 262 SYDFTVRFWNFSKPDP 277
Score = 128 (50.1 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 38/120 (31%), Positives = 56/120 (46%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E ++T S D +L++WD G + + H + V SV WS QL
Sbjct: 73 VTWSENNEHILVTCSGDGSLQLWDT---AKATGPL--QVYKEHTQEVYSVDWSQTRGEQL 127
Query: 115 FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTK 172
VS S+D +VKLWD K L GHE + WS + S D ++R++ K
Sbjct: 128 VVSGSWDQTVKLWDPTVGK-SLCTFRGHESVIYSTIWSPHIPGCFASASGDQTLRIWDVK 186
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 182 (69.1 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 42/131 (32%), Positives = 73/131 (55%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K PL + GH+ I+ V ++ II S S+D ++K+W+ G ++ H
Sbjct: 375 KKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYL------TSLRGHVS 428
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V + WS D +L VS S D+++K+WD + K+ + D+ GH D+V +WS D + + S
Sbjct: 429 AVYQIAWSA-DSRLLVSGSSDSTLKVWDAETKKLAI-DLPGHADEVFATDWSPDGQRVAS 486
Query: 160 GGQDNSVRVFK 170
GG+D +R+++
Sbjct: 487 GGKDKCLRIWR 497
Score = 165 (63.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 41/167 (24%), Positives = 77/167 (46%)
Query: 11 LGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSS 70
+ V F G L + + T F+ L + TP T KGH+ + ++ W+ + + S
Sbjct: 131 ISVAFSPTGKYLASGSGDTTV--RFWDLSTE-TPQFTAKGHRHWVLSIAWSPDGKKLASG 187
Query: 71 WDHT-LKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSP--IDPQL--FVSASFDNSVK 125
++ + +WD G + + H +W+ + W P I+P+ SAS D S++
Sbjct: 188 CKNSQIFLWDPATGNQ-----IGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIR 242
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVRVFKTK 172
+WD + + GH V CV W + S QD +++V++++
Sbjct: 243 IWDTLMGRCDKI-LTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQ 288
Score = 142 (55.0 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+GH EA+ +V ++ + + S S D T++ WD + T H+ WV S+
Sbjct: 122 SLEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLST------ETPQFTAKGHRHWVLSI 175
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS------DYRYIMS 159
WSP D + S ++ + LWD + + GH + C+ W + RY+ S
Sbjct: 176 AWSP-DGKKLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRYLAS 234
Query: 160 GGQDNSVRVFKT 171
+D S+R++ T
Sbjct: 235 ASKDGSIRIWDT 246
Score = 139 (54.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 37/108 (34%), Positives = 61/108 (56%)
Query: 64 DEIITSSWDHTLKIW-DAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+ +++ S D TL +W AE K + + T H+ + V +SP D ++ SASFD
Sbjct: 355 ERLVSGSDDFTLFLWRPAE----DKKPLERMT--GHQALINQVLFSP-DTRIIASASFDK 407
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
S+KLW+ R+ K L + GH V + WS D R ++SG D++++V+
Sbjct: 408 SIKLWEGRTGKY-LTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVW 454
Score = 85 (35.0 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH ++++ V+W + +SS D T+K+W ++ G I+ T H WV ++
Sbjct: 255 LTGHTQSVTCVKWGGDGLLYSSSQDRTIKVWRSQDG------ILCRTLQGHAHWVNTMAL 308
Query: 108 S 108
S
Sbjct: 309 S 309
Score = 76 (31.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 112 PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFK 170
P+ VS S D ++ LW K PL M GH+ + V +S D R I S D S+++++
Sbjct: 354 PERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWE 413
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 189 (71.6 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 52/154 (33%), Positives = 82/154 (53%)
Query: 20 ALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIW 78
AL ++ I+ L + +L +P KGH A+ +V ++ ++ S S D T+KIW
Sbjct: 233 ALWNISGIKCAPLQVYASALLF-SPA-QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIW 290
Query: 79 DAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD 138
D + +++T H EWV+SV +S D +L SAS D +VK+WD + +
Sbjct: 291 DTAT------SFLQNTLEGHNEWVKSVVFSH-DSRLLASASDDGTVKIWDTATGTLQRM- 342
Query: 139 MLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKT 171
+ GH D V V +S D R I SG D +VR+++T
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWET 376
Score = 158 (60.7 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 42/125 (33%), Positives = 70/125 (56%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH + + +V ++ +I S S D T+KIWD +++ SH WV+SV
Sbjct: 468 TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT------VPLQNNLESHDNWVRSV 521
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+S D +L SAS D +VK+WD + + + GH+D+V V++S D R + S D
Sbjct: 522 VFSH-DSRLLASASDDMTVKIWDTATGSLEN-TLEGHDDRVNSVSFSPDSRLLASASDDG 579
Query: 165 SVRVF 169
+V+++
Sbjct: 580 TVKIW 584
Score = 149 (57.5 bits), Expect = 6.0e-09, P = 6.0e-09
Identities = 40/125 (32%), Positives = 72/125 (57%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
LKGH +++ +V ++ +I S S D T++IW+ G +++ TF H++ V +V
Sbjct: 343 LKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTG------LLRHTFEDHEDSVMAVS 396
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNWS-DYRYIMSGGQDN 164
++ D + SAS +VK+WD R+ L ++L GH+D V V++S D R + S D
Sbjct: 397 FAH-DSRRLASASDGGNVKIWDTRTGS--LQNVLEGHDDCVNSVSFSPDSRLLASASDDR 453
Query: 165 SVRVF 169
+V+++
Sbjct: 454 TVKIW 458
Score = 140 (54.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T + H++++ AV + + S+ D +KIWD G ++ + H + V SV
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQ------NVLEGHDDCVNSV 437
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+SP D +L SAS D +VK+W + + + GH D V V +S D R I S D
Sbjct: 438 SFSP-DSRLLASASDDRTVKIWHAATGSLQR-TLEGHNDWVRSVVFSHDSRLIASASDDM 495
Query: 165 SVRVFKTKHQP 175
+V+++ T P
Sbjct: 496 TVKIWDTATVP 506
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 176 (67.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G K TF H+
Sbjct: 103 PLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLC---TFRGHES 156
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 157 IIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVRIV-IPAHQAEILSCDWCKYNENLLV 215
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 216 TGAVDCSLR 224
Score = 150 (57.9 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 148 LCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGVR---IV---IPAHQAEI 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 202 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 161 GQDNSVRVFKTKHQPKS 177
D +VR F +P S
Sbjct: 262 SYDFTVR-FWNFSKPDS 277
Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/120 (33%), Positives = 56/120 (46%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E +IT S D +L++WD K A + H + V SV WS QL
Sbjct: 73 VTWSENNEHVLITCSGDGSLQLWDTA-----KAAGPLQVYKEHAQEVYSVDWSQTRGEQL 127
Query: 115 FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTK 172
VS S+D +VKLWD K L GHE + WS + S D ++R++ K
Sbjct: 128 VVSGSWDQTVKLWDPTVGK-SLCTFRGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVK 186
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 175 (66.7 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G TF H+
Sbjct: 103 PLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRSL------CTFKGHES 156
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F SAS D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 157 IIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVRIV-VPAHQAEILSCDWCKYNENLLV 215
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 216 TGAVDCSLR 224
Score = 150 (57.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 42/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T KGH+ I + W+ + S S D TL+IWD + G++ IV +H+ +
Sbjct: 148 LCTFKGHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGVR---IV---VPAHQAEI 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 202 LSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQPVFELLGHTYAIRRVKFSPFYASVLASC 261
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 262 SYDFTVRFWNFSKPNP 277
Score = 129 (50.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 41/127 (32%), Positives = 61/127 (48%)
Query: 53 EAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI 110
+A+ V W+ +E ++T S D +L++WD G G + + H + V SV WS
Sbjct: 68 DALFDVTWSENNEHVLVTCSGDGSLQLWDTA-GAA--GPL--QVYKEHTQEVYSVDWSQT 122
Query: 111 -DPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNS 165
QL VS S+D +VKLWD P V L GHE + WS + S D +
Sbjct: 123 RGEQLVVSGSWDQTVKLWD---PTVGRSLCTFKGHESIIYSTIWSPHIPGCFASASGDQT 179
Query: 166 VRVFKTK 172
+R++ K
Sbjct: 180 LRIWDVK 186
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 175 (66.7 bits), Expect = 5.4e-13, P = 5.4e-13
Identities = 39/129 (30%), Positives = 70/129 (54%)
Query: 44 PLITLKGHKEAISAVQW--TAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
PL K H + + +V W T ++++ S SWD T+K+WD +G K TF H+
Sbjct: 103 PLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLC---TFRGHES 156
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIM 158
+ S WSP P F S+S D ++++WD+++ V + + H+ +++ +W Y ++
Sbjct: 157 VIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVRIV-VPAHQAEILSCDWCKYNENLVV 215
Query: 159 SGGQDNSVR 167
+G D S+R
Sbjct: 216 TGAVDCSLR 224
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH+ I + W+ +SS D TL+IWD + G++ IV +H+ +
Sbjct: 148 LCTFRGHESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGVR---IV---VPAHQAEI 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSG 160
S W + L V+ + D S++ WDLR+ + P+F++LGH + V +S + + S
Sbjct: 202 LSCDWCKYNENLVVTGAVDCSLRGWDLRNVQQPVFELLGHTYAIRRVKFSPFHASVLASC 261
Query: 161 GQDNSVRVFK-TKHQP 175
D +VR + +K P
Sbjct: 262 SYDFTVRFWNFSKPDP 277
Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 58 VQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQL 114
V W+ +E ++T S D +L++WD G + F H + V SV WS QL
Sbjct: 73 VTWSENNEHVLVTCSGDGSLQLWDT---ARATGPL--QVFKEHTQEVYSVDWSQTRGEQL 127
Query: 115 FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR---YIMSGGQDNSVRVFKT 171
VS S+D +VKLWD K L GHE + WS + + S G D ++R++
Sbjct: 128 VVSGSWDQTVKLWDPTVGK-SLCTFRGHESVIYSTIWSPHIPGCFASSSG-DQTLRIWDV 185
Query: 172 K 172
K
Sbjct: 186 K 186
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 179 (68.1 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 45/128 (35%), Positives = 74/128 (57%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH++ + +V ++ +++ S S D T+KIWD G ++ T H++WV+SV
Sbjct: 374 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH------TLEGHRDWVRSV 427
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+S D QL SAS D++VK+WD + + + GH D V V +S D R + S D
Sbjct: 428 IFSH-DSQLLASASDDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSRLLASASDDR 485
Query: 165 SVRVFKTK 172
+VR++ T+
Sbjct: 486 TVRIWDTE 493
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 42/126 (33%), Positives = 72/126 (57%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
TL+GH + + +V ++ ++ S+ D T+KIWD G ++ T H++WV+SV
Sbjct: 333 TLEGHSDLVRSVIFSHDSRLLASASDSTVKIWDTGTGSLQH------TLEGHRDWVRSVI 386
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
+S D QL SAS D++VK+WD + + + GH D V V +S D + + S D++
Sbjct: 387 FSH-DSQLLASASDDSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSQLLASASDDST 444
Query: 166 VRVFKT 171
V+++ T
Sbjct: 445 VKIWDT 450
Score = 162 (62.1 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 41/125 (32%), Positives = 69/125 (55%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH++ + +V ++ +++ S S D T+KIWD G ++ T H++WV+SV
Sbjct: 416 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQH------TLEGHRDWVRSV 469
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+S D +L SAS D +V++WD + GH V V++S D R + S D
Sbjct: 470 IFSH-DSRLLASASDDRTVRIWDTEKGSHK-HTLEGHSSLVTSVSFSHDSRLLASASNDQ 527
Query: 165 SVRVF 169
+VR++
Sbjct: 528 TVRIW 532
Score = 155 (59.6 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 43/129 (33%), Positives = 72/129 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L L+GH+ A+ +V ++ ++ S S D T+KIWD E G ++ T H + V+
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQH------TLEGHSDLVR 342
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
SV +S D +L SAS D++VK+WD + + + GH D V V +S D + + S
Sbjct: 343 SVIFSH-DSRLLASAS-DSTVKIWDTGTGSLQ-HTLEGHRDWVRSVIFSHDSQLLASASD 399
Query: 163 DNSVRVFKT 171
D++V+++ T
Sbjct: 400 DSTVKIWDT 408
Score = 123 (48.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 32/95 (33%), Positives = 52/95 (54%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH++ + +V ++ ++ S S D T++IWD E G K T H V SV
Sbjct: 458 TLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKH------TLEGHSSLVTSV 511
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVP-LFDM 139
+S D +L SAS D +V++WD+ + + FD+
Sbjct: 512 SFSH-DSRLLASASNDQTVRIWDIEARSLQHTFDL 545
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 172 (65.6 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/129 (37%), Positives = 69/129 (53%)
Query: 46 ITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
+TL GH AIS+V+++ E + SS D + IW A G KK T H +
Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKK------TLYGHSLEISD 86
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYIMSGGQD 163
V WS D VSAS D ++K+WD+RS K L + GH D V C +++ I+SG D
Sbjct: 87 VAWSS-DSSRLVSASDDKTLKVWDMRSGKC-LKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 164 NSVRVFKTK 172
SV++++ K
Sbjct: 145 ESVKIWEVK 153
Score = 169 (64.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 43/125 (34%), Positives = 69/125 (55%)
Query: 47 TLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH IS V W++ ++++S D TLK+WD M+ G +K T H ++V
Sbjct: 76 TLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWD-----MRSGKCLK-TLKGHSDFVFCC 129
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SVK+W++++ K L + H D + VN++ + I+SG D
Sbjct: 130 DFNP-PSNLIVSGSFDESVKIWEVKTGKC-LKTLSAHSDPISAVNFNCNGSLIVSGSYDG 187
Query: 165 SVRVF 169
R++
Sbjct: 188 LCRIW 192
Score = 132 (51.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/130 (28%), Positives = 68/130 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL H + ISAV + +I S S+D +IWDA G +++ V
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAA-----SGQCLRTLADEGNPPVS 212
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV----NWSDYRYIMS 159
V++SP + + ++A+ DN++KLWD + L GH+++ C+ + + ++++S
Sbjct: 213 FVKFSP-NGKYILTATLDNTLKLWDYSRGRC-LKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 160 GGQDNSVRVF 169
G +DN V ++
Sbjct: 271 GSEDNMVYIW 280
Score = 121 (47.7 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TLKGH + + + +I S S+D ++KIW+ +K G +K T S+H + +
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWE-----VKTGKCLK-TLSAHSDPIS 169
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK--VMCVNWS-DYRYIMSG 160
+V ++ + L VS S+D ++WD S + L E V V +S + +YI++
Sbjct: 170 AVNFN-CNGSLIVSGSYDGLCRIWDAASGQC--LRTLADEGNPPVSFVKFSPNGKYILTA 226
Query: 161 GQDNSVRVF 169
DN+++++
Sbjct: 227 TLDNTLKLW 235
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 176 (67.0 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 42/129 (32%), Positives = 78/129 (60%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ + GH++ ++ V ++ +I S+ WD+ K+W+A + G + +T H V
Sbjct: 405 PIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNA-----RDGKFI-NTLRGHVAPV 458
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
+S D +L V+AS D ++K+W++R+ K+ D+ GHED+V V+WS D + + SGG
Sbjct: 459 YQCSFSA-DSRLLVTASKDTTLKVWNVRTGKLAT-DLPGHEDEVYGVDWSPDGQRVGSGG 516
Query: 162 QDNSVRVFK 170
+D +VR+++
Sbjct: 517 RDKAVRLWR 525
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/137 (32%), Positives = 68/137 (49%)
Query: 43 TPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
TP TLKGH + V W+ + T S D T++IWD E G K+ V S H +W
Sbjct: 186 TPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETG--KQ---VGSELKGHAKW 240
Query: 102 VQSVRWSPID------PQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW---S 152
VQ + W P+ P+L VSAS D + ++W + + + + GH+ V CV W +
Sbjct: 241 VQGIAWEPLHLWRDGTPRL-VSASKDFTARIWTVNTGRTEHV-LSGHKGSVSCVRWGAGN 298
Query: 153 DYRYIMSGGQDNSVRVF 169
+ + D +V+V+
Sbjct: 299 GTGVVYTASHDKTVKVW 315
Score = 144 (55.7 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 35/106 (33%), Positives = 49/106 (46%)
Query: 48 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+ GH E I Q++ + T S D+T +IWDAE G K T H WV V
Sbjct: 148 IPGHGEPILCAQFSPASSARLATGSGDNTARIWDAETG------TPKHTLKGHAGWVLGV 201
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
WSP D + S D +V++WD + K ++ GH V + W
Sbjct: 202 SWSP-DGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAW 246
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 173 (66.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 49/140 (35%), Positives = 71/140 (50%)
Query: 45 LITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L +LKGH+ +S+V + D ++++S DHT+K WD G TF H +WV+
Sbjct: 184 LKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTG------YCVYTFRGHNDWVR 237
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDL--RSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSG 160
+R S D LF SAS D +V +W +S K+ L D HE V CV W+ D Y
Sbjct: 238 MIRISN-DGTLFASASLDQTVTVWSFATKSAKLVLRD---HEHAVECVEWAPDTAYTNVT 293
Query: 161 GQD---NSVRVFKTKHQPKS 177
GQ NS + + + +S
Sbjct: 294 GQQPEGNSTHILFSGSRDRS 313
Score = 123 (48.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
L GH+ I+ V + + I+ S S D T+K+WD E G +++ T H + V +
Sbjct: 102 LTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLER------TLKGHTDAVNDIA 155
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDNS 165
QL VS S D S+KLWD L + GHE V V + +++S +D++
Sbjct: 156 IDAAGKQL-VSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHT 214
Query: 166 VR 167
++
Sbjct: 215 IK 216
Score = 123 (48.4 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 41/130 (31%), Positives = 64/130 (49%)
Query: 47 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH +A++ + A ++++ S D ++K+WD G + KS H+ V SV
Sbjct: 143 TLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDF---GQTYDCL-KS-LKGHEHTVSSV 197
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+ P +SAS D+++K WD+ S ++ GH D V + S D S D
Sbjct: 198 TFLPTG-DFVLSASRDHTIKQWDI-STGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQ 255
Query: 165 SVRV--FKTK 172
+V V F TK
Sbjct: 256 TVTVWSFATK 265
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDNCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
E + +++WSP P + SASFD++V+LWD+ + + + H++ V V +
Sbjct: 393 E-IYTIKWSPTGPGTSNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAF 450
Query: 152 S-DYRYIMSGGQDNSVRVFKTK 172
S D RY+ SG D V ++ T+
Sbjct: 451 SPDGRYLASGSFDKCVHIWNTQ 472
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDNCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
E + +++WSP P + SASFD++V+LWD+ + + + H++ V V +
Sbjct: 393 E-IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAF 450
Query: 152 S-DYRYIMSGGQDNSVRVFKTK 172
S D RY+ SG D V ++ T+
Sbjct: 451 SPDGRYLASGSFDKCVHIWNTQ 472
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDNCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
E + +++WSP P + SASFD++V+LWD+ + + + H++ V V +
Sbjct: 393 E-IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAF 450
Query: 152 S-DYRYIMSGGQDNSVRVFKTK 172
S D RY+ SG D V ++ T+
Sbjct: 451 SPDGRYLASGSFDKCVHIWNTQ 472
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDNCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
E + +++WSP P + SASFD++V+LWD+ + + + H++ V V +
Sbjct: 393 E-IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAF 450
Query: 152 S-DYRYIMSGGQDNSVRVFKTK 172
S D RY+ SG D V ++ T+
Sbjct: 451 SPDGRYLASGSFDKCVHIWNTQ 472
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 175 (66.7 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 45/142 (31%), Positives = 75/142 (52%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDNCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW 151
E + +++WSP P + SASFD++V+LWD+ + + + H++ V V +
Sbjct: 393 E-IYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDV-DRGICIHTLTKHQEPVYSVAF 450
Query: 152 S-DYRYIMSGGQDNSVRVFKTK 172
S D RY+ SG D V ++ T+
Sbjct: 451 SPDGRYLASGSFDKCVHIWNTQ 472
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 179 (68.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 39/124 (31%), Positives = 70/124 (56%)
Query: 51 HKEAISAVQW--TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
H A++ + W +D I+T S D+TL++WD K TFS E ++ V+++
Sbjct: 115 HSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIR----DSANASKITFSPKSESIRDVQFN 170
Query: 109 PIDPQLFVSASFDN-SVKLWDLRSPKVPLFDMLGHEDKVMCVNW--SDYRYIMSGGQDNS 165
P F +A+FDN +++LWD+R P + + + H+ V+ ++W + I SGG+D +
Sbjct: 171 PSQANQF-AAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEEKNIIASGGRDRA 229
Query: 166 VRVF 169
+RV+
Sbjct: 230 IRVW 233
Score = 115 (45.5 bits), Expect = 0.00034, P = 0.00034
Identities = 32/134 (23%), Positives = 60/134 (44%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+ H+ + + W ++ I +S D +++WD G K ST SS V +
Sbjct: 201 ITSHQGLVLTIDWHPEEKNIIASGGRDRAIRVWDFSNG---KSLNNVSTISS----VSRI 253
Query: 106 RWSPIDPQLFVSAS--FDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQD 163
+W P + S S D + +WD++ P +PLF H D + W ++S +D
Sbjct: 254 KWRPGNKWHIASCSSIVDFQIHIWDVKKPYIPLFSFTDHRDVPTGLIWKSPSSLISCSKD 313
Query: 164 NSVRV--FKTKHQP 175
+ + + F+ ++P
Sbjct: 314 SHLLLNEFQDSYKP 327
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 174 (66.3 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ A V + +H++ +
Sbjct: 347 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDACVHN-LQAHRKEI 400
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + H++ V V +S D
Sbjct: 401 YTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQG-VCTHTLRKHQEPVYSVAFSPD 459
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 460 GKYLASGSFDKCVHIWNTQ 478
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 173 (66.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ A V +H + +
Sbjct: 351 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDACVHD-LQAHSKEI 404
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V ++ H++ V V +S D
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQG-VCTHTLMKHQEPVYSVAFSPD 463
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 464 GKYLASGSFDKYVHIWNTQ 482
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 173 (66.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ A V +H + +
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDACVHD-LQAHSKEI 407
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + + H++ V V +S D
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERG-VCIHTLTKHQEPVYSVAFSPD 466
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 467 GKYLASGSFDKCVHIWNTQ 485
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 173 (66.0 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 44/139 (31%), Positives = 74/139 (53%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ A V +H + +
Sbjct: 354 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDACVHD-LQAHSKEI 407
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + + H++ V V +S D
Sbjct: 408 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERG-VCIHTLTKHQEPVYSVAFSPD 466
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 467 GKYLASGSFDKCVHIWNTQ 485
>UNIPROTKB|P93397 [details] [associations]
symbol:P93397 "Guanine nucleotide-binding protein subunit
beta-1" species:4097 "Nicotiana tabacum" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:Z84820 PIR:T04086 ProteinModelPortal:P93397
IntAct:P93397 Uniprot:P93397
Length = 377
Score = 170 (64.9 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 47/133 (35%), Positives = 68/133 (51%)
Query: 48 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS-HKEWVQS 104
L GHK +S+ Q+ ++ +ITSS D T +WD G + ++ F S H VQS
Sbjct: 152 LSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTG--LRTSVFGGEFQSGHTADVQS 209
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQD 163
V S +P+LFVS S D + +LWD R GHE V V + D +G +D
Sbjct: 210 VSISSSNPRLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSED 269
Query: 164 NSVRVF--KTKHQ 174
+ R+F +T+HQ
Sbjct: 270 GTCRLFDIRTEHQ 282
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 174 (66.3 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 45/125 (36%), Positives = 69/125 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + + S S D +K+WD +KG I K + SH + V+
Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR----RKGCIFK--YKSHTQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + KV +F+ GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKV-MFEFTGHSGPVNVVEFHPSEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH I ++Q +A +E+I + S ++++WD E A + T HK +
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE------AAKILRTLLGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P S S D +KLWD+R K +F H V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-SFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 111 (44.1 bits), Expect = 0.00062, P = 0.00062
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
+ +K + K H +A+ ++++ + + S+ D HT+K+WD G V F+
Sbjct: 134 VRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK------VMFEFTG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHE-DKVMCVNWSDYRY 156
H V V + P + L S S D +++ WDL K + + E V C+ ++
Sbjct: 188 HSGPVNVVEFHPSE-YLLASGSSDRTIRFWDLE--KFHVVSCIEEEATPVRCILFNPDGC 244
Query: 157 IMSGGQDNSVRVF 169
+ GG +S+RV+
Sbjct: 245 CLYGGFQDSLRVY 257
>DICTYBASE|DDB_G0288425 [details] [associations]
symbol:gemin5 "component of gems 5" species:44689
"Dictyostelium discoideum" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0288425 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006397 GO:GO:0005681
GenomeReviews:CM000154_GR GO:GO:0003723 EMBL:AAFI02000111
GO:GO:0015030 RefSeq:XP_636745.1 ProteinModelPortal:Q54IY5
EnsemblProtists:DDB0302538 GeneID:8626623 KEGG:ddi:DDB_G0288425
eggNOG:NOG249859 KO:K13133 OMA:SENISKM Uniprot:Q54IY5
Length = 1276
Score = 165 (63.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 35/83 (42%), Positives = 52/83 (62%)
Query: 95 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-- 152
F HK V SV WS +DP L SAS D +V++W+++S K + +M GH+ +V V WS
Sbjct: 861 FIGHKNNVCSVSWSNVDPNLLGSASADGTVQVWNIKS-KEAISNMRGHDGRVFTVCWSLL 919
Query: 153 DYRYIMSGGQDNSVRVFKTKHQP 175
D ++SGG+D +VR++ QP
Sbjct: 920 DPNLLVSGGEDQTVRLWNYSTQP 942
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 29/81 (35%), Positives = 45/81 (55%)
Query: 50 GHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GHK + +V W+ VD + ++S D T+++W+ + K AI S H V +V W
Sbjct: 863 GHKNNVCSVSWSNVDPNLLGSASADGTVQVWNIK----SKEAI--SNMRGHDGRVFTVCW 916
Query: 108 SPIDPQLFVSASFDNSVKLWD 128
S +DP L VS D +V+LW+
Sbjct: 917 SLLDPNLLVSGGEDQTVRLWN 937
Score = 38 (18.4 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 48 LKGHKEAISAVQW-----TAVDE----IITSSWDHTLKIW 78
L GH + +++V + + DE IT S D T++IW
Sbjct: 90 LNGHTDRVTSVGFFKRFESKNDESYKWCITGSDDKTVRIW 129
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 171 (65.3 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 44/139 (31%), Positives = 73/139 (52%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ V +H + +
Sbjct: 355 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDTCVHD-LQAHSKEI 408
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V L + H++ V V +S D
Sbjct: 409 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVERG-VCLHTLTKHQEPVYSVAFSPD 467
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 468 GKYLASGSFDKCVHIWNTQ 486
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 170 (64.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 46/145 (31%), Positives = 77/145 (53%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q P+ T +GH ++A++W ++ S S D TLKIW MK+ + V + +K
Sbjct: 338 QDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWS-----MKQDSCVHDLQAHNK 392
Query: 100 EWVQSVRWSPIDP-------QLFV----SASFDNSVKLWDLRSPKVPLFDMLGHEDKVMC 148
E + +++WSP P L + SASFD++V+LWD+ + + + H++ V
Sbjct: 393 E-IYTIKWSPTGPGTNNPNANLMLASLDSASFDSTVRLWDV-DRGICIHTLTKHQEPVYS 450
Query: 149 VNWS-DYRYIMSGGQDNSVRVFKTK 172
V +S D RY+ SG D V ++ T+
Sbjct: 451 VAFSPDGRYLASGSFDKCVHIWNTQ 475
>UNIPROTKB|C3UJQ7 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1 Y-linked"
species:9593 "Gorilla gorilla" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0000122 GO:GO:0007605 InterPro:IPR013720
Pfam:PF08513 GO:GO:0042393 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 HOGENOM:HOG000220902 EMBL:FJ532265
ProteinModelPortal:C3UJQ7 Uniprot:C3UJQ7
Length = 524
Score = 170 (64.9 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 43/139 (30%), Positives = 73/139 (52%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ A V +H + +
Sbjct: 351 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDACVHD-LQAHSKEI 404
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + H++ V + +S D
Sbjct: 405 YTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQG-VCTHTLTKHQEPVYSIAFSPD 463
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 464 GKYLASGSFDKCVHIWNTQ 482
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 169 (64.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 39 ILQKTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFS 96
+L + PL+ GHK+ A+ W+ +++ + +W+ G A+ F+
Sbjct: 210 VLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSW---AVDPIPFA 266
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY 156
H V+ ++WSP + +F S S D SV +WD+R K P H V ++W+
Sbjct: 267 GHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLAS 326
Query: 157 IM--SGGQDNSVRV 168
M SG D + +
Sbjct: 327 CMLASGSDDGTFSI 340
Score = 118 (46.6 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSS 97
L K+P ++ K H ++ + W + + +S D T I D L +K G V + F
Sbjct: 301 LGKSPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRL--IKGGDAVVAHFEY 358
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK 133
HK + S+ WS + S DN + +WDL K
Sbjct: 359 HKHPITSIEWSAHEASTLAVTSGDNQLTIWDLSLEK 394
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 168 (64.2 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 41 QKTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
Q PL T+ H A+ W+ + T ++++ + +A K F H
Sbjct: 239 QTAPLHTISNHSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDT---QAFKGH 295
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYI 157
E V+ ++WSP + ++F S S D +V++WD+R PK P + H V ++WS + Y+
Sbjct: 296 TESVEDIQWSPSEEKVFASCSIDQTVRIWDIRKPK-PAITVKAHTADVNVISWSRNVEYL 354
Query: 158 M-SGGQDNSVRVF 169
+ SG D S RV+
Sbjct: 355 LVSGCDDGSFRVW 367
Score = 150 (57.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHK 99
KT KGH E++ +QW+ +E + +S D T++IWD K AI T +H
Sbjct: 286 KTDTQAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIR---KPKPAI---TVKAHT 339
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK--VPLFDMLGHEDKVMCVNWSDYR-- 155
V + WS L VS D S ++WDLR+ K P+ D H + + W+ Y
Sbjct: 340 ADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSDFKYHTGPITSIEWNPYEES 399
Query: 156 YIMSGGQDNSVRVF 169
++ D+ V ++
Sbjct: 400 QVIVSSSDDQVTIW 413
Score = 118 (46.6 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTA-VDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFS 96
I + P IT+K H ++ + W+ V+ ++ S D + ++WD L K + V S F
Sbjct: 326 IRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWD--LRAFKDNSPV-SDFK 382
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 128
H + S+ W+P + + +S D+ V +WD
Sbjct: 383 YHTGPITSIEWNPYEESQVIVSSSDDQVTIWD 414
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 167 (63.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 44 PLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ T GH A+ W+ ++T + +W GG + + F H
Sbjct: 200 PIFTFAGHMGEGFALDWSPRVSGRLLTGDCQKNIHLWTPTDGG--SWHVDQRPFMGHTRS 257
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLR---SPKVPLFDMLGHEDKVMCVNWSDYR-YI 157
V+ ++WSP + +F S S D S+++WD+R S L H+ V +NWS ++
Sbjct: 258 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFL 317
Query: 158 MSGGQDNSVRVFKTKHQPKSG 178
+SGG D +++++ + Q KSG
Sbjct: 318 LSGGDDGALKIWDLR-QFKSG 337
Score = 130 (50.8 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D LKIWD L K G+ V +TF H +
Sbjct: 295 LTTTSAHDGDVNVINWSRREPFLLSGGDDGALKIWD--LRQFKSGSPV-ATFKQHVAPIT 351
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ DN + WDL + P
Sbjct: 352 SVEWHPQDSGVFAASGADNQITQWDLAVERDP 383
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 168 (64.2 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 44/139 (31%), Positives = 73/139 (52%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ + + +KE +
Sbjct: 396 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQEVCIHDLQAHNKE-I 449
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + H++ V V +S D
Sbjct: 450 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERG-VCTHTLTKHQEPVYSVAFSPD 508
Query: 154 YRYIMSGGQDNSVRVFKTK 172
RY+ SG D V ++ T+
Sbjct: 509 GRYLASGSFDKCVHIWNTQ 527
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 167 (63.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 43/139 (30%), Positives = 73/139 (52%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ V +H + +
Sbjct: 350 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQDTCVHD-LQAHSKEI 403
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + + H++ V V +S D
Sbjct: 404 YTIKWSPTGPGTSNPNSNIMLASASFDSTVRLWDV-DRGVCIHTLTKHQEPVYSVAFSPD 462
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 463 GKYLASGSFDKCVHIWNTQ 481
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 44 PLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ GH A+ W+ ++T + +W GG + + F H
Sbjct: 206 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGG--SWHVDQRPFVGHTRS 263
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLR---SPKVPLFDMLGHEDKVMCVNWSDYR-YI 157
V+ ++WSP + +F S S D S+++WD+R S L H+ V +NWS ++
Sbjct: 264 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVINWSHREPFL 323
Query: 158 MSGGQDNSVRVFKTKHQPKSG 178
+SGG D +++V+ + Q KSG
Sbjct: 324 LSGGDDGALKVWDLR-QFKSG 343
Score = 128 (50.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D LK+WD L K G+ V +TF H V
Sbjct: 301 LTTATAHDGDVNVINWSHREPFLLSGGDDGALKVWD--LRQFKSGSPV-ATFKQHVAPVT 357
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ DN + WDL + P
Sbjct: 358 SVEWHPQDSGVFAASGADNQITQWDLAVERDP 389
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 43/143 (30%), Positives = 73/143 (51%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHK 99
Q+ P+ T +GH ++A++W ++ S S D TLK+W MK+ V +H
Sbjct: 334 QERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWS-----MKQDTCVHD-LQAHS 387
Query: 100 EWVQSVRWSPIDP---------QLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVN 150
+ + +++WSP P L SASFD++V+LWD + + H++ V V
Sbjct: 388 KEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAERGAC-IHTLTKHQEPVYSVA 446
Query: 151 WS-DYRYIMSGGQDNSVRVFKTK 172
+S D R++ SG D V ++ T+
Sbjct: 447 FSPDGRHLASGSFDKCVHIWNTQ 469
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 165 (63.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 44 PLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
PL T K HK + + W+ +I ++ + + IW+A K G + T HK+W+
Sbjct: 139 PLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNA-----KTGEQIGKTLKRHKQWI 193
Query: 103 QSVRWSPI--DP--QLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM 158
S+ W P+ DP +L S D ++ +WD V + + GH V C+ W I
Sbjct: 194 TSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTV-VRCLSGHTASVTCLRWGGEGLIY 252
Query: 159 SGGQDNSVRVFK 170
SG QD +V++++
Sbjct: 253 SGSQDRTVKMWR 264
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 42/118 (35%), Positives = 66/118 (55%)
Query: 56 SAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLF 115
+A++ + +++ S D TL +W+ + K +I + T H + V V +SP D +
Sbjct: 322 AALEIAGGERLVSGSDDFTLFMWNPK---ETKQSINRMT--GHMQLVNQVVFSP-DTRYI 375
Query: 116 VSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTK 172
SASFD SVKLW R+ K L + GH V V WS D R ++SG D++++VF+ K
Sbjct: 376 ASASFDKSVKLWCGRTGKY-LASLRGHVGPVYQVAWSADSRLLVSGSADSTLKVFELK 432
Score = 141 (54.7 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 38/131 (29%), Positives = 74/131 (56%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K + + GH + ++ V ++ I S S+D ++K+W G K A ++ H
Sbjct: 350 KQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTG--KYLASLRG----HVG 403
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
V V WS D +L VS S D+++K+++L++ + +D+ GH D+V V+WS + ++S
Sbjct: 404 PVYQVAWSA-DSRLLVSGSADSTLKVFELKTKSL-YYDLPGHGDEVFTVDWSPEGTKVVS 461
Query: 160 GGQDNSVRVFK 170
GG+D +++++
Sbjct: 462 GGKDKVLKLWR 472
Score = 116 (45.9 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 33/132 (25%), Positives = 61/132 (46%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
++ GH E + + Q++ + S S D T++IWD EL + T SHK WV +
Sbjct: 100 SIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIEL------ELPLHTCKSHKSWVLCI 153
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY------RYIMS 159
WSP D SA + + +W+ ++ + + H+ + + W R + S
Sbjct: 154 AWSP-DATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLAS 212
Query: 160 GGQDNSVRVFKT 171
G+D ++ ++ T
Sbjct: 213 CGKDGNIFIWDT 224
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 160 (61.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 50/165 (30%), Positives = 85/165 (51%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSTDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + +T S H WV +V +SP D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HASLAATLSGHGSWVLNVAFSPDDAH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ S + + L H+D+V V ++ + I+S G D + V+
Sbjct: 258 VWDV-SARTCVHTFLDHQDQVWGVKYNRNGSKIVSVGDDQEIHVY 301
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 166 (63.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 46/139 (33%), Positives = 69/139 (49%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P T GH+ ++ V+W ++ S S D T KIW+ +K+ V H + +
Sbjct: 440 PAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN-----IKQSTFVHD-LREHTKEI 493
Query: 103 QSVRWSPIDP-------QL-FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
++RWSP P QL SASFD++VKLWD K+ L GH + V + +S +
Sbjct: 494 YTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKM-LCSFNGHREPVYSLAFSPN 552
Query: 154 YRYIMSGGQDNSVRVFKTK 172
YI SG D S+ ++ K
Sbjct: 553 GEYIASGSLDKSIHIWSIK 571
Score = 119 (46.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDE----------IITSSWDHTLKIWDAELGGMKKG 88
I Q T + L+ H + I ++W+ + ++S+D T+K+WDAELG M
Sbjct: 477 IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKML-- 534
Query: 89 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV 134
+F+ H+E V S+ +SP + + S S D S+ +W ++ K+
Sbjct: 535 ----CSFNGHREPVYSLAFSP-NGEYIASGSLDKSIHIWSIKEGKI 575
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 165 (63.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 43/139 (30%), Positives = 73/139 (52%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T +GH ++A++W ++ S S D TLKIW MK+ + + +KE +
Sbjct: 404 PVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWS-----MKQEVCIHDLQAHNKE-I 457
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ V + H++ V V +S D
Sbjct: 458 YTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERG-VCTHTLTKHQEPVYSVAFSPD 516
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+Y+ SG D V ++ T+
Sbjct: 517 GKYLASGSFDKCVHIWNTQ 535
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 160 (61.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 47 TLKGHKEAISAVQWTAVDEI--ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
+L GH +AI+ V ++ D + ++ SWDH++++WD LG ++S F H V S
Sbjct: 67 SLTGHSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLG-----ETIRS-FIGHTSDVFS 119
Query: 105 VRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS---DYRYIMSG 160
V +SP + Q+ VSAS D ++KLW+ L K + D H D + CV +S + I+S
Sbjct: 120 VSFSPDNRQI-VSASRDKTIKLWNTLAQCKYTITDQQ-HTDWITCVRFSPSPNQAIIVSC 177
Query: 161 GQDNSVRVFKTKH 173
G D V+V+ K+
Sbjct: 178 GWDKLVKVWNLKN 190
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 160 (61.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 47/133 (35%), Positives = 75/133 (56%)
Query: 47 TLKGHKEAISAVQWTAVDEI--ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
+L GH +AI+ V ++ D + ++ SWDH++++WD LG ++S F H V S
Sbjct: 67 SLTGHSQAINDVSISS-DGLFALSGSWDHSVRLWDLSLG-----ETIRS-FIGHTSDVFS 119
Query: 105 VRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS---DYRYIMSG 160
V +SP + Q+ VSAS D ++KLW+ L K + D H D + CV +S + I+S
Sbjct: 120 VSFSPDNRQI-VSASRDKTIKLWNTLAQCKYTITDQQ-HTDWITCVRFSPSPNQAIIVSC 177
Query: 161 GQDNSVRVFKTKH 173
G D V+V+ K+
Sbjct: 178 GWDKLVKVWNLKN 190
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 162 (62.1 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 41 QKTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
Q P+ + GH A+ W+ ++T + +W GG + + F H
Sbjct: 203 QMKPIFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGG--SWHVDQRPFVGH 260
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR---SPKVPLFDMLGHEDKVMCVNWSDYR 155
V+ ++WSP + +F S S D S+++WD+R S L H+ V ++WS
Sbjct: 261 TRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRRE 320
Query: 156 -YIMSGGQDNSVRVFKTKHQPKSG 178
+++SGG D +++++ + Q KSG
Sbjct: 321 PFLLSGGDDGALKIWDLR-QFKSG 343
Score = 125 (49.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D LKIWD L K G+ V +TF H V
Sbjct: 301 LTTATAHDGDVNVISWSRREPFLLSGGDDGALKIWD--LRQFKSGSPV-ATFKQHVAPVT 357
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ D+ + WDL + P
Sbjct: 358 SVEWHPQDSGVFAASGADHQITQWDLAVERDP 389
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 167 (63.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I++SS D +K+WD E KG F H +V S+ W+P D F +AS D +VK
Sbjct: 115 ILSSSDDMFIKLWDYE-----KGWSNTQVFEGHSHYVMSIAWNPKDTNQFATASLDKTVK 169
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W + SP P F + GHE + V + + Y++SG D V+++
Sbjct: 170 VWSINSPH-PHFTLEGHEKGINSVEYFSGGEKPYLISGADDKLVKIW 215
Score = 116 (45.9 bits), Expect = 0.00024, P = 0.00024
Identities = 32/125 (25%), Positives = 60/125 (48%)
Query: 49 KGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+GH + ++ W D + T+S D T+K+W T H++ + SV
Sbjct: 140 EGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSIN------SPHPHFTLEGHEKGINSVE 193
Query: 107 W-SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+ S + +S + D VK+WD +S K + + GH + V V + + I+SG +D
Sbjct: 194 YFSGGEKPYLISGADDKLVKIWDYQS-KTCVQTLEGHSNNVSVVCYHPELPLILSGSEDG 252
Query: 165 SVRVF 169
+V+++
Sbjct: 253 TVKLW 257
>CGD|CAL0003838 [details] [associations]
symbol:orf19.7235 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003838 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 EMBL:AACQ01000092
RefSeq:XP_715035.1 ProteinModelPortal:Q59ZV6 GeneID:3643307
KEGG:cal:CaO19.7235 Uniprot:Q59ZV6
Length = 892
Score = 166 (63.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 38/135 (28%), Positives = 71/135 (52%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
+ + P+ +GH ++ ++ W+ + +IT S D T+K+W + + + TF H
Sbjct: 288 VFHRQPVREFRGHSSSVLSLAWSKNNFLITGSMDKTVKLWHVD----RDRCL--QTFE-H 340
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYI 157
+++V SV++ P D + F+S S DN V+LW + V LG E + + +S D +
Sbjct: 341 EDFVTSVKFHPSDDRFFLSGSLDNGVRLWSVLENSVSYSKNLGDEVLITALEFSPDGLHC 400
Query: 158 MSGGQDNSVRVFKTK 172
GG + S+ + +TK
Sbjct: 401 FVGGFNGSLFILETK 415
>UNIPROTKB|Q59ZV6 [details] [associations]
symbol:CaO19.7235 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003838 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0035690 EMBL:AACQ01000092
RefSeq:XP_715035.1 ProteinModelPortal:Q59ZV6 GeneID:3643307
KEGG:cal:CaO19.7235 Uniprot:Q59ZV6
Length = 892
Score = 166 (63.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 38/135 (28%), Positives = 71/135 (52%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
+ + P+ +GH ++ ++ W+ + +IT S D T+K+W + + + TF H
Sbjct: 288 VFHRQPVREFRGHSSSVLSLAWSKNNFLITGSMDKTVKLWHVD----RDRCL--QTFE-H 340
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYI 157
+++V SV++ P D + F+S S DN V+LW + V LG E + + +S D +
Sbjct: 341 EDFVTSVKFHPSDDRFFLSGSLDNGVRLWSVLENSVSYSKNLGDEVLITALEFSPDGLHC 400
Query: 158 MSGGQDNSVRVFKTK 172
GG + S+ + +TK
Sbjct: 401 FVGGFNGSLFILETK 415
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 161 (61.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 38/139 (27%), Positives = 74/139 (53%)
Query: 43 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSH 98
+P + L+GH++ + W + ++++S DHT+ +WD G K+G +V K+ F+ H
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIS-AGPKEGKVVDAKAVFTGH 225
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-R 155
V+ V W + LF S + D + +WD RS P + H +V C++++ Y
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 285
Query: 156 YIMS-GGQDNSVRVFKTKH 173
+I++ G D +V ++ ++
Sbjct: 286 FILATGSADKTVALWDLRN 304
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS---HSVDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 159 (61.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 40/130 (30%), Positives = 74/130 (56%)
Query: 45 LITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+ TL+GH ++IS+ +++ + + TSS D T+KIW+ + I + T + HK V
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD------HMICERTLTGHKLGVN 133
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQ 162
+ WS D + VSAS D ++K++++ + ++ + GH + V C N++ ++SG
Sbjct: 134 DIAWSS-DSRCVVSASDDKTLKIFEIVTSRMTK-TLKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 163 DNSVRVFKTK 172
D SVR++ K
Sbjct: 192 DESVRIWDVK 201
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK ++ + W++ ++++S D TLKI++ M K T H +V
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK------TLKGHNNYVFCC 177
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ + + H D V V+++ D I SG D
Sbjct: 178 NFNP-QSSLVVSGSFDESVRIWDVKTGMC-IKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 165 SVRVFKT 171
VR++ T
Sbjct: 236 LVRIWDT 242
Score = 133 (51.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL H + +SAV + +I S S+D ++IWD G +K+ V V
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-----NGQCIKTLVDDENPPVAFV 262
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMSGG 161
++SP + + ++++ D+++KLWD K L GHE+ C+ N+S ++I+SG
Sbjct: 263 KFSP-NGKYILASNLDSTLKLWDFSKGKT-LKQYTGHENSKYCIFANFSVTGGKWIISGS 320
Query: 162 QDNSVRVF 169
+D + ++
Sbjct: 321 EDCKIYIW 328
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 159 (61.0 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 40/130 (30%), Positives = 74/130 (56%)
Query: 45 LITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+ TL+GH ++IS+ +++ + + TSS D T+KIW+ + I + T + HK V
Sbjct: 80 MCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMD------HMICERTLTGHKLGVN 133
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQ 162
+ WS D + VSAS D ++K++++ + ++ + GH + V C N++ ++SG
Sbjct: 134 DIAWSS-DSRCVVSASDDKTLKIFEIVTSRMTK-TLKGHNNYVFCCNFNPQSSLVVSGSF 191
Query: 163 DNSVRVFKTK 172
D SVR++ K
Sbjct: 192 DESVRIWDVK 201
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK ++ + W++ ++++S D TLKI++ M K T H +V
Sbjct: 124 TLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTK------TLKGHNNYVFCC 177
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+++ + + H D V V+++ D I SG D
Sbjct: 178 NFNP-QSSLVVSGSFDESVRIWDVKTGMC-IKTLPAHSDPVSAVSFNRDGSLIASGSYDG 235
Query: 165 SVRVFKT 171
VR++ T
Sbjct: 236 LVRIWDT 242
Score = 133 (51.9 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL H + +SAV + +I S S+D ++IWD G +K+ V V
Sbjct: 208 TLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTA-----NGQCIKTLVDDENPPVAFV 262
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMSGG 161
++SP + + ++++ D+++KLWD K L GHE+ C+ N+S ++I+SG
Sbjct: 263 KFSP-NGKYILASNLDSTLKLWDFSKGKT-LKQYTGHENSKYCIFANFSVTGGKWIISGS 320
Query: 162 QDNSVRVF 169
+D + ++
Sbjct: 321 EDCKIYIW 328
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 160 (61.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 167 PDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDIS-AGPKEGKIVDAKAIFTGHS 225
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 226 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEF 285
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 286 ILATGSADKTVALWDLRN 303
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 223 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS---HSVDAHTAEVNCLSF 279
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 280 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRR 339
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 340 LNVWDLS---KIGEEQSA 354
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 160 (61.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 38/139 (27%), Positives = 74/139 (53%)
Query: 43 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSH 98
+P + L+GH++ + W + ++++S DHT+ +WD G K+G +V K+ F+ H
Sbjct: 167 SPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIS-AGPKEGKVVDAKAIFTGH 225
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-R 155
V+ V W + LF S + D + +WD RS P + H +V C++++ Y
Sbjct: 226 SAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSE 285
Query: 156 YIMS-GGQDNSVRVFKTKH 173
+I++ G D +V ++ ++
Sbjct: 286 FILATGSADKTVALWDLRN 304
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPS---HSVDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 160 (61.4 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 43 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSH 98
+P + L+GH++ + W ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 SPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-GAPKEGKIVDAKTIFTGH 226
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-R 155
V+ V W + LF S + D + +WD RS P + H +V C++++ Y
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSE 286
Query: 156 YIMS-GGQDNSVRVFKTKH 173
+I++ G D +V ++ ++
Sbjct: 287 FILATGSADKTVALWDLRN 305
Score = 143 (55.4 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 41/160 (25%), Positives = 71/160 (44%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++ P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISGAPKEGKIVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVFKTKHQPKSGQKSKA 183
+ V WS + + S G D + V+ K G++ A
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLS---KIGEEQSA 356
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 157 (60.3 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 46/134 (34%), Positives = 72/134 (53%)
Query: 47 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T GH + +V ++A + +I++ S D T+K+W+ LG K T H EWV V
Sbjct: 100 TFVGHTNDVLSVSFSADNRQIVSGSRDRTIKLWNT-LGDCK----YTITDKGHTEWVSCV 154
Query: 106 RWSPIDPQ--LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
R+SP +PQ + VSA +D VK+W+L S ++ D +GH + V S D SGG+
Sbjct: 155 RFSP-NPQNPVIVSAGWDKLVKVWELASCRLQT-DHIGHTGYINTVTISPDGSLCASGGK 212
Query: 163 DNSVRVF---KTKH 173
D ++ ++KH
Sbjct: 213 DGVTMLWDLNESKH 226
Score = 129 (50.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 38/129 (29%), Positives = 69/129 (53%)
Query: 47 TLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
TL+GH ++++ T+++ +++ S D TL IW+ G K + H V
Sbjct: 10 TLEGHNGWVTSLA-TSLENPNMLLSGSRDKTLIIWNLTRDEQAYG-YPKRSLEGHSHIVS 67
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S D +SAS+D S++LW+L S + +GH + V+ V++S D R I+SG +
Sbjct: 68 DCVISS-DGAYALSASWDKSLRLWELSSGQTTR-TFVGHTNDVLSVSFSADNRQIVSGSR 125
Query: 163 DNSVRVFKT 171
D +++++ T
Sbjct: 126 DRTIKLWNT 134
Score = 128 (50.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 42/132 (31%), Positives = 67/132 (50%)
Query: 44 PLITLKGHKEAIS-AVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P +L+GH +S V + +++SWD +L++W+ G + TF H V
Sbjct: 55 PKRSLEGHSHIVSDCVISSDGAYALSASWDKSLRLWELSSGQTTR------TFVGHTNDV 108
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS---DYRYIM 158
SV +S + Q+ VS S D ++KLW+ L K + D GH + V CV +S I+
Sbjct: 109 LSVSFSADNRQI-VSGSRDRTIKLWNTLGDCKYTITDK-GHTEWVSCVRFSPNPQNPVIV 166
Query: 159 SGGQDNSVRVFK 170
S G D V+V++
Sbjct: 167 SAGWDKLVKVWE 178
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 162 (62.1 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 40/142 (28%), Positives = 73/142 (51%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVDEIIT-SSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
++ P+++L+GH + ++ + IT SS D + ++WD E GG ++ H
Sbjct: 375 IETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGK---CLLDQ--EGH 429
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY-I 157
+ V + D L + S D V++WDLRS + P+ GH +V+ V+WS Y +
Sbjct: 430 SDGVMGISIQS-DGSLLATGSQDGLVRIWDLRSGR-PILYFQGHSKQVISVDWSPNGYQL 487
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
S +DN+V ++ + + +S Q
Sbjct: 488 ASSSEDNTVVIWDIRKKEQSCQ 509
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 160 (61.4 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 39/135 (28%), Positives = 68/135 (50%)
Query: 44 PLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
PL T G + + W+++ ++ T + +W + GG + A+ + + HK+
Sbjct: 220 PLFTNNGSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGG--QWAVGANPLTGHKKS 277
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRS-PKVPLFDML--GHEDKVMCVNWSDYR-YI 157
V+ + WSP + L S S D S+KLWD RS PK + HE V ++W+ + I
Sbjct: 278 VEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWNRHENLI 337
Query: 158 MSGGQDNSVRVFKTK 172
+SGG D ++++ K
Sbjct: 338 VSGGDDGELKIWSLK 352
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 30/128 (23%), Positives = 61/128 (47%)
Query: 48 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
L GHK+++ + W+ + + + S D ++K+WD K A V + +H+ V +
Sbjct: 271 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTR--SAPKDACVCTVQKAHESDVNVI 328
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDYRY--IMSGG 161
W+ + L VS D +K+W L++ + P+ H + V+W + M+ G
Sbjct: 329 SWNRHE-NLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPITSVDWHPHETTTFMASG 387
Query: 162 QDNSVRVF 169
+D+ ++
Sbjct: 388 EDDQTTIW 395
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 162 (62.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 48/152 (31%), Positives = 82/152 (53%)
Query: 27 IEVTSLPSFFQLILQKTPLIT-LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAE--- 81
I V SL ++ L+ L+GHKE++ ++ ++ I+ S S D T+K+W+ +
Sbjct: 458 IAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATR 517
Query: 82 ---LGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFD 138
L +K I K+T++ H ++V SV SP D + +S S D S++ WDL++ + L
Sbjct: 518 SVGLSAIKPEGICKATYTGHTDFVLSVAVSP-DSRWGLSGSKDRSMQFWDLQTGQSYL-T 575
Query: 139 MLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
GH++ V+ V +S D R SG D R++
Sbjct: 576 CQGHKNSVISVCFSPDGRQFASGSGDLRARIW 607
Score = 117 (46.2 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 31/124 (25%), Positives = 65/124 (52%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
TL+ H + V+++ + + + + ++D + G +S S +V+++
Sbjct: 309 TLE-HPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFTLHEESPDPSRDLYVRTIA 367
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
+SP D + V+ + D +KLWDL + KV + GHE + +++S + R+I+SG D +
Sbjct: 368 FSP-DGKYLVTGTEDRQIKLWDLSTQKVR-YVFSGHEQDIYSLDFSHNGRFIVSGSGDRT 425
Query: 166 VRVF 169
R++
Sbjct: 426 ARLW 429
Score = 110 (43.8 bits), Expect = 0.00075, P = 0.00075
Identities = 40/160 (25%), Positives = 73/160 (45%)
Query: 13 VIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITS-SW 71
+ F G L +T E + + L QK + GH++ I ++ ++ I S S
Sbjct: 366 IAFSPDGKYL-VTGTEDRQI-KLWDLSTQKVRYV-FSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 72 DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRS 131
D T ++WD E G I+K + V ++ SP D Q S D +++W +
Sbjct: 423 DRTARLWDVETGQ----CILKLEIENG---VTAIAISPND-QFIAVGSLDQIIRVWSVSG 474
Query: 132 PKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFK 170
V + GH++ V + +S D ++SG D +++V++
Sbjct: 475 TLVERLE--GHKESVYSIAFSPDSSILLSGSLDKTIKVWE 512
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 158 (60.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 44/127 (34%), Positives = 66/127 (51%)
Query: 47 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK ++ W+A + I+T+S D TLKI++ M K T H +V
Sbjct: 116 TLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAK------TLKGHTNYVFCC 169
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++P L VS SFD SV++WD+R+ + + H D V V+++ D I SG D
Sbjct: 170 NFNP-QSSLVVSGSFDESVRIWDVRTGMC-VKTLPAHSDPVSAVSFNRDGSLITSGSYDG 227
Query: 165 SVRVFKT 171
VR++ T
Sbjct: 228 LVRIWDT 234
Score = 151 (58.2 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 41/129 (31%), Positives = 73/129 (56%)
Query: 47 TLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T++GH ++ISAV+++ + + TSS D T+KIW+ + + + T + HK V
Sbjct: 74 TIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWN--MSDLS----CERTLTGHKLGVNDF 127
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNWSDYR-YIMSGGQD 163
WS D + V+AS D ++K++++ P V + L GH + V C N++ ++SG D
Sbjct: 128 AWSA-DSKSIVTASDDKTLKIYEV--PTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFD 184
Query: 164 NSVRVFKTK 172
SVR++ +
Sbjct: 185 ESVRIWDVR 193
Score = 147 (56.8 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 44/138 (31%), Positives = 72/138 (52%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL H + +SAV + +ITS S+D ++IWD G VK+ V V
Sbjct: 200 TLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTA-----NGQCVKTLVDDENPPVAFV 254
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWS--DYRYIMSGG 161
++SP + + +S++ DN++KLWD K L GHE+ C+ N+S ++I+SG
Sbjct: 255 KFSP-NGKYILSSNLDNTLKLWDFGKGKT-LKQYQGHENNKYCIFANFSVTGGKWIISGS 312
Query: 162 QDNSVRVF--KTKHQPKS 177
+D + V+ +TK +S
Sbjct: 313 EDCKIYVWNLQTKEVVQS 330
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 165 (63.1 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 39/115 (33%), Positives = 63/115 (54%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+++SS D +K+WD E KG + F H +V V ++P D F SAS D ++K
Sbjct: 329 VLSSSDDMLIKLWDWE-----KGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 383
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVFKTKHQPKS 177
+W+L SP P F + H V CV++ D Y+++G D++ +V+ +Q KS
Sbjct: 384 IWNLGSPD-PNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWD--YQTKS 435
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 165 (63.1 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 35/119 (29%), Positives = 64/119 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIV---KSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+++ S D +++WD +G V + ++S+ + V+ VRWSP D LF A+
Sbjct: 209 LLSGSQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSG 268
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTKHQPKSGQK 180
+++LWD+R P+ + H+ V+W D ++I+SGG D V+V++ + QK
Sbjct: 269 AIQLWDIRKSSSPILRITAHDRPCYSVDWHPDGKHIVSGGTDRQVKVWEFSITAERRQK 327
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 159 (61.0 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 40/127 (31%), Positives = 73/127 (57%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+ I++VQ++ + ++ S S D T+++W + K+G S F +H V+SV +S
Sbjct: 58 GHKDVITSVQFSPLGNLLASASRDRTIRLWIPD----KRGK--SSEFKAHTAPVRSVDFS 111
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q SAS D S+K+W++ + L+ + H V C +S D R I+S +D +++
Sbjct: 112 A-DGQFLASASEDKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 168 VFKTKHQ 174
++ T ++
Sbjct: 170 IWDTTNK 176
Score = 134 (52.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 49 KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
KGHK AI++V ++ ++ T SWD L +W ++ A + HK+ + SV++
Sbjct: 15 KGHKAAITSVDFSPNGKQLATGSWDTFLMLWS-----LRPQARA-FRYVGHKDVITSVQF 68
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSV 166
SP+ L SAS D +++LW + + + H V V++S D +++ S +D S+
Sbjct: 69 SPLG-NLLASASRDRTIRLW-IPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSI 126
Query: 167 RVFKTKHQ 174
+V+ Q
Sbjct: 127 KVWNMYRQ 134
Score = 117 (46.2 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 36/124 (29%), Positives = 66/124 (53%)
Query: 49 KGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
K H + +V ++A + + S S D ++K+W+ M + + S + H WV+ ++
Sbjct: 99 KAHTAPVRSVDFSADGQFLASASEDKSIKVWN-----MYRQRFLYSLYR-HTHWVRCAKF 152
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPK-VPLF-DMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
SP D +L VS S D ++K+WD + + V F D +G + V N + I S G D++
Sbjct: 153 SP-DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFV-AFN-PNGTCIASAGSDHT 209
Query: 166 VRVF 169
V+++
Sbjct: 210 VKIW 213
Score = 110 (43.8 bits), Expect = 0.00053, P = 0.00053
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 90 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV 149
+++ F HK + SV +SP QL + S+D + LW LR P+ F +GH+D + V
Sbjct: 9 VLERYFKGHKAAITSVDFSPNGKQL-ATGSWDTFLMLWSLR-PQARAFRYVGHKDVITSV 66
Query: 150 NWSDYRYIM-SGGQDNSVRVFKTKHQPKSGQ 179
+S ++ S +D ++R++ + KS +
Sbjct: 67 QFSPLGNLLASASRDRTIRLWIPDKRGKSSE 97
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 163 (62.4 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 55/168 (32%), Positives = 86/168 (51%)
Query: 8 ILTLGVIFMTVGALLTLTNIEVTSLPSFF-QL--ILQK--TPLITLKGHKEAISAVQWTA 62
I G++F AL+ +N LPS+ QL + +K L TL+GH ++ AV
Sbjct: 656 IYCAGLVFAPQTALIR-SNFS-EDLPSWICQLPKVNEKWGAELQTLEGHSNSVWAV---- 709
Query: 63 VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
+ + S D T+++WD G +++ T H WV SV +SP D +L S SFD
Sbjct: 710 ---LASGSDDETVRLWDPATGSLQQ------TLEGHSGWVLSVAFSP-DGRLLASGSFDK 759
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+V+LWD + + + GH + V V +S D R + SG D +VR++
Sbjct: 760 TVRLWDPATGSLQQ-TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLW 806
Score = 133 (51.9 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH + +V ++ ++ S S+D T+++WD G +++ T H + V+SV
Sbjct: 774 TLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQ------TLRGHSDTVRSV 827
Query: 106 RWSPIDPQLFVSASFDNSVKLWD 128
+SP D +L S SFD +V+LWD
Sbjct: 828 AFSP-DGRLLASGSFDKTVRLWD 849
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 38/121 (31%), Positives = 65/121 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQD 163
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y+++ G
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 164 N 164
+
Sbjct: 210 D 210
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+ T D + +W K I+ T H V+SVR + + +L V+ S S++
Sbjct: 36 LATGGDDCRVNLWSIN----KPNCIMSLT--GHTSPVESVRLNTPE-ELIVAGSQSGSIR 88
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQ 174
+WDL + K+ L ++GH+ + +++ Y ++ SG QD +++++ + +
Sbjct: 89 VWDLEAAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 137
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 155 (59.6 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 41/130 (31%), Positives = 69/130 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL+GH AIS V+++ ++ S S D T+ +W A +++ + H +
Sbjct: 36 LKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSAT-----NYSLIHR-YEGHSSGIS 89
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYIMSGGQ 162
+ WS D SAS D ++++WD RSP L + GH + V CVN++ I+SG
Sbjct: 90 DLAWSS-DSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSF 148
Query: 163 DNSVRVFKTK 172
D ++R+++ K
Sbjct: 149 DETIRIWEVK 158
Score = 126 (49.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+K H IS+V + +I S S D + KIWDA K+G +K+ V +
Sbjct: 166 IKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDA-----KEGTCLKTLIDDKSPAVSFAK 220
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV----NWSDYRYIMSGGQ 162
+SP + + + A+ D+++KL + + K L GH +KV C+ + ++ +YI+SG +
Sbjct: 221 FSP-NGKFILVATLDSTLKLSNYATGKF-LKVYTGHTNKVFCITSAFSVTNGKYIVSGSE 278
Query: 163 DNSV 166
DN V
Sbjct: 279 DNCV 282
Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 34/126 (26%), Positives = 61/126 (48%)
Query: 49 KGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+GH IS + W++ S+ D TL+IWDA +K H +V V +
Sbjct: 82 EGHSSGISDLAWSSDSHYTCSASDDCTLRIWDAR----SPYECLK-VLRGHTNFVFCVNF 136
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSV 166
+P L VS SFD ++++W++++ K + H + V+++ D I+S D S
Sbjct: 137 NP-PSNLIVSGSFDETIRIWEVKTGKCVRM-IKAHSMPISSVHFNRDGSLIVSASHDGSC 194
Query: 167 RVFKTK 172
+++ K
Sbjct: 195 KIWDAK 200
Score = 109 (43.4 bits), Expect = 0.00040, P = 0.00040
Identities = 29/87 (33%), Positives = 45/87 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L L+GH + V + +I S S+D T++IW+ +K G V+ +H +
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE-----VKTGKCVRM-IKAHSMPIS 174
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLR 130
SV ++ D L VSAS D S K+WD +
Sbjct: 175 SVHFNR-DGSLIVSASHDGSCKIWDAK 200
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 154 (59.3 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 51/167 (30%), Positives = 83/167 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV SV +SP D FVS+S D S+K
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHGSWVLSVAFSPDDTH-FVSSSSDKSIK 257
Query: 126 LWDL--RSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVF 169
+WD RS FD H+D+V V ++ I+S G D ++ ++
Sbjct: 258 VWDTSSRSCVNTFFD---HQDQVWSVKYNPTGSKIVSAGDDRAIHIY 301
>ZFIN|ZDB-GENE-050417-342 [details] [associations]
symbol:nsmaf "neutral sphingomyelinase (N-SMase)
activation associated factor" species:7955 "Danio rerio"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pfam:PF02893 ZFIN:ZDB-GENE-050417-342
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR004182 SMART:SM00568
Gene3D:1.10.1540.10 Gene3D:2.30.29.40 InterPro:IPR000409
InterPro:IPR023362 Pfam:PF02138 SMART:SM01026 SUPFAM:SSF81837
PROSITE:PS50197 GeneTree:ENSGT00670000097747 CTD:8439 EMBL:CR354563
EMBL:CU929087 IPI:IPI00497443 RefSeq:XP_003199050.1
UniGene:Dr.88496 Ensembl:ENSDART00000073635 GeneID:550506
KEGG:dre:550506 NextBio:20879748 ArrayExpress:F1QZ06 Bgee:F1QZ06
Uniprot:F1QZ06
Length = 911
Score = 162 (62.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 39/126 (30%), Positives = 70/126 (55%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWD---AELGGMKKGAIVKSTFSSHKEWVQ 103
TL GH +A+S + W D++ T+SWD T+K+W+ A++ K+ H+ V
Sbjct: 702 TLMGHDDAVSDICWRD-DKLYTASWDSTVKVWECVAADISSNKRTQFDPLAEFEHEAGVN 760
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
++ SP L + + + ++ +WDL SP +P+ + H K+ V +S D R+I+S G+
Sbjct: 761 TLDLSPAGT-LLATGTKEGTLTVWDLASP-LPVNQLTCHSGKIHQVAFSPDSRHILSVGE 818
Query: 163 DNSVRV 168
D+ + V
Sbjct: 819 DSCLMV 824
Score = 112 (44.5 bits), Expect = 0.00070, P = 0.00070
Identities = 36/123 (29%), Positives = 68/123 (55%)
Query: 49 KGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
K HKEA++ V T + D I T+S D TLK++ E G+++ +FS+ + S
Sbjct: 621 KIHKEAVTGVAVTLSGDSIFTTSQDSTLKMFSKE-NGLQRSV----SFSNMA--LSSCLM 673
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSVR 167
P D ++ V +S+DN+V + + + ++GH+D V + W D + + + D++V+
Sbjct: 674 LP-DDKIVVCSSWDNNVYFYSIAYGRRQ-DTLMGHDDAVSDICWRDDK-LYTASWDSTVK 730
Query: 168 VFK 170
V++
Sbjct: 731 VWE 733
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 162 (62.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/118 (35%), Positives = 67/118 (56%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D T+K+W+ + K ++ TF H+ +V SV ++P DP F SA D +VK
Sbjct: 112 ILTSSDDLTIKLWNWD-HNWK----LEQTFEGHQHYVMSVNFNPKDPNTFASACLDRTVK 166
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYR------YIMSGGQDNSVRVFKTKHQPKS 177
+W L S + P F ++ HE K VN+ DY Y+++ D +++V+ +Q KS
Sbjct: 167 IWSLGSSQ-PNFTLIAHEAKG--VNYVDYYPQADKPYLITSSDDKTIKVWD--YQTKS 219
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAVFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 125 (49.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L +WD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM-CVNWSDYR--YIMSGGQDN 164
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDR 340
Query: 165 SVRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 RLNVWDLS---KIGEEQSA 356
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 158 (60.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 37/124 (29%), Positives = 74/124 (59%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+ GH+ ++ V+++ ++I S S+D ++++W A G +TF H + V +V
Sbjct: 371 MTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYM------ATFRGHVQAVYTVA 424
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
WS D +L VS S D+++K+W +++ K+ ++ GH D+V V+W+ D + SGG+D
Sbjct: 425 WSA-DSRLIVSGSKDSTLKVWSVQTKKLAQ-ELPGHADEVFGVDWAPDGSRVASGGKDKV 482
Query: 166 VRVF 169
++++
Sbjct: 483 IKLW 486
Score = 152 (58.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKE 100
+TP T GHK+ + V W + + S ++ IWD E G +KG S HK+
Sbjct: 151 ETPHFTCTGHKQWVLCVSWAPDGKRLASGCKAGSIIIWDPETG-QQKGR----PLSGHKK 205
Query: 101 WVQSVRWSPI--DPQL--FVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRY 156
+ + W P DP+ SAS D ++WD++ + L ++ GH + V V W
Sbjct: 206 HINCLAWEPYHRDPECRKLASASGDGDCRIWDVKLGQC-LMNIAGHTNAVTAVRWGGAGL 264
Query: 157 IMSGGQDNSVRVFK 170
I + +D +V++++
Sbjct: 265 IYTSSKDRTVKMWR 278
Score = 137 (53.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 63 VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 122
V+ +++ S D+TL +W K + + T H+ V V++SP D +L SASFD
Sbjct: 345 VESLVSCSDDNTLYLWR---NNQNK-CVERMT--GHQNVVNDVKYSP-DVKLIASASFDK 397
Query: 123 SVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKTK 172
SV+LW + + GH V V WS D R I+SG +D++++V+ +
Sbjct: 398 SVRLWRASDGQY-MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQ 447
Score = 126 (49.4 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 33/94 (35%), Positives = 52/94 (55%)
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
S+ H E V S+ +SP D S S D +V+LWDL + + P F GH+ V+CV+W+
Sbjct: 113 SSMPGHAEAVVSLNFSP-DGAHLASGSGDTTVRLWDLNT-ETPHFTCTGHKQWVLCVSWA 170
Query: 153 -DYRYIMSGGQDNSVRVF-----KTKHQPKSGQK 180
D + + SG + S+ ++ + K +P SG K
Sbjct: 171 PDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHK 204
Score = 120 (47.3 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 33/133 (24%), Positives = 59/133 (44%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
++ GH EA+ ++ ++ + S S D T+++WD T + HK+WV V
Sbjct: 114 SMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNT------ETPHFTCTGHKQWVLCV 167
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY------RYIMS 159
W+P D + S S+ +WD + + + GH+ + C+ W Y R + S
Sbjct: 168 SWAP-DGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLAS 226
Query: 160 GGQDNSVRVFKTK 172
D R++ K
Sbjct: 227 ASGDGDCRIWDVK 239
Score = 110 (43.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
L+ + GH A++AV+W I TSS D T+K+W A G I+ TFS H WV +
Sbjct: 244 LMNIAGHTNAVTAVRWGGAGLIYTSSKDRTVKMWRAADG------ILCRTFSGHAHWVNN 297
Query: 105 VRWS 108
+ S
Sbjct: 298 IALS 301
Score = 109 (43.4 bits), Expect = 0.00074, P = 0.00074
Identities = 29/84 (34%), Positives = 40/84 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+ T +GH +A+ V W+A +I S S D TLK+W + KK A H + V
Sbjct: 410 MATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQT---KKLA---QELPGHADEVF 463
Query: 104 SVRWSPIDPQLFVSASFDNSVKLW 127
V W+P D S D +KLW
Sbjct: 464 GVDWAP-DGSRVASGGKDKVIKLW 486
Score = 76 (31.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
P + + VS S DN++ LW K + M GH++ V V +S D + I S D SVR
Sbjct: 342 PDEVESLVSCSDDNTLYLWRNNQNKC-VERMTGHQNVVNDVKYSPDVKLIASASFDKSVR 400
Query: 168 VFK 170
+++
Sbjct: 401 LWR 403
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 46 ITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
+ LKGHK AI + WT+ +I+++S D T++ WD E G K+ +K + H +V S
Sbjct: 90 MVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETG--KQ---IKK-MAEHSSFVNS 143
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQD 163
+ P L +S S D + KLWD+R + ++ V++SD I +GG D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGA--IQTFPDKYQITAVSFSDAADKIFTGGVD 201
Query: 164 NSVRVF 169
N V+V+
Sbjct: 202 NDVKVW 207
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 52 KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPI 110
K I+AV ++ A D+I T D+ +K+WD ++KG T H++ + + SP
Sbjct: 180 KYQITAVSFSDAADKIFTGGVDNDVKVWD-----LRKGEATM-TLEGHQDTITGMSLSP- 232
Query: 111 DPQLFVSASFDNSVKLWDLR--SPK---VPLFDMLGH--EDKVMCVNWS-DYRYIMSGGQ 162
D ++ DN + +WD+R +P+ V +F+ H E ++ +WS D + +G
Sbjct: 233 DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSS 292
Query: 163 DNSVRVFKT 171
D V ++ T
Sbjct: 293 DRMVHIWDT 301
Score = 112 (44.5 bits), Expect = 0.00018, P = 0.00018
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
+ P++ L GH A+ +++ +I S S D + +W G K ++K HK
Sbjct: 43 EAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKG----HKN 97
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKV--MCVNWSDYRYIM 158
+ + W+ Q+ VSAS D +V+ WD+ + K + M H V C I+
Sbjct: 98 AILDLHWTSDGSQI-VSASPDKTVRAWDVETGK-QIKKMAEHSSFVNSCCPTRRGPPLII 155
Query: 159 SGGQDNSVRVFKTKHQ 174
SG D + +++ + +
Sbjct: 156 SGSDDGTAKLWDMRQR 171
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 154 (59.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 50 GHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GH + +V ++A + +I++ S D ++K+W+ LG K T H EWV VR+S
Sbjct: 103 GHTNDVLSVSFSADNRQIVSGSRDRSIKLWNT-LGDCK----YTITEKGHSEWVSCVRFS 157
Query: 109 PIDPQ--LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
P +PQ + VS+ +D VK+W+L S K+ D +GH + V S D SGG+D +
Sbjct: 158 P-NPQNPVIVSSGWDKLVKVWELSSCKLQT-DHIGHTGYINTVTISPDGSLCASGGKDGT 215
Query: 166 VRVF---KTKH 173
++ ++KH
Sbjct: 216 TMLWDLNESKH 226
Score = 130 (50.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 44 PLITLKGHKEAIS-AVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P +LKGH +S V + +++SWD TL++W+ G + F H V
Sbjct: 55 PKRSLKGHSHIVSDCVISSDGAYALSASWDKTLRLWELATGTTTR------RFVGHTNDV 108
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS---DYRYIM 158
SV +S + Q+ VS S D S+KLW+ L K + + GH + V CV +S I+
Sbjct: 109 LSVSFSADNRQI-VSGSRDRSIKLWNTLGDCKYTITEK-GHSEWVSCVRFSPNPQNPVIV 166
Query: 159 SGGQDNSVRVFK 170
S G D V+V++
Sbjct: 167 SSGWDKLVKVWE 178
Score = 128 (50.1 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 42/139 (30%), Positives = 74/139 (53%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKKGAIVKS 93
QLIL+ T L+GH ++++ T+++ +++SS D TL IW+ G K
Sbjct: 4 QLILKGT----LEGHNGWVTSLA-TSMENPNMLLSSSRDKTLIIWNLTRDETSYG-YPKR 57
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS- 152
+ H V S D +SAS+D +++LW+L + +GH + V+ V++S
Sbjct: 58 SLKGHSHIVSDCVISS-DGAYALSASWDKTLRLWELATGTTTR-RFVGHTNDVLSVSFSA 115
Query: 153 DYRYIMSGGQDNSVRVFKT 171
D R I+SG +D S++++ T
Sbjct: 116 DNRQIVSGSRDRSIKLWNT 134
Score = 106 (42.4 bits), Expect = 0.00087, P = 0.00087
Identities = 27/91 (29%), Positives = 46/91 (50%)
Query: 85 MKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV----PLFDML 140
M + I+K T H WV S+ S +P + +S+S D ++ +W+L + P +
Sbjct: 1 MAEQLILKGTLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLK 60
Query: 141 GHEDKVM-CVNWSDYRYIMSGGQDNSVRVFK 170
GH V CV SD Y +S D ++R+++
Sbjct: 61 GHSHIVSDCVISSDGAYALSASWDKTLRLWE 91
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 157 (60.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 44 PLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ + GH A+ W+ ++T + +W GG + + F H
Sbjct: 205 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWN--VDQRPFVGHTRS 262
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRS-P--KVPLFDMLGHEDKVMCVNWSDYR-YI 157
V+ ++WSP + +F S S D S+++WD+R+ P L H+ V ++WS ++
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNVISWSRREPFL 322
Query: 158 MSGGQDNSVRVFKTKHQPKSG 178
+SGG D +++V+ + Q KSG
Sbjct: 323 LSGGDDGTLKVWDLR-QFKSG 342
Score = 134 (52.2 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 31/92 (33%), Positives = 45/92 (48%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D TLK+WD L K G+ V +TF H V
Sbjct: 300 LTTAAAHDGDVNVISWSRREPFLLSGGDDGTLKVWD--LRQFKSGSPV-ATFKQHVAPVT 356
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ DN + WDL + P
Sbjct: 357 SVEWHPQDSGVFAASGADNQITQWDLAVERDP 388
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 157 (60.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 38/141 (26%), Positives = 69/141 (48%)
Query: 44 PLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ + GH A+ W+ ++T + +W GG + + F H
Sbjct: 206 PIFSFAGHMGEGFALDWSPRVPGRLLTGDCQKNVHLWTPTEGGSWN--VDQRPFVGHTRS 263
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRS-P--KVPLFDMLGHEDKVMCVNWSDYR-YI 157
V+ ++WSP + +F S S D S+++WD+R+ P L H+ V ++WS ++
Sbjct: 264 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNVISWSRREPFL 323
Query: 158 MSGGQDNSVRVFKTKHQPKSG 178
+SGG D +++V+ + Q KSG
Sbjct: 324 LSGGDDGALKVWDLR-QFKSG 343
Score = 130 (50.8 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D LK+WD L K G+ V +TF H V
Sbjct: 301 LTTATAHDGDVNVISWSRREPFLLSGGDDGALKVWD--LRQFKSGSPV-ATFKQHMAPVT 357
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ DN + WDL + P
Sbjct: 358 SVEWHPQDSGVFAASGADNQITQWDLAVERDP 389
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 159 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 217
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 278 ILATGSADKTVALWDLRN 295
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 215 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 271
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 331
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 332 LNVWDLS---KIGEEQSA 346
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 156 (60.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 159 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 217
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 218 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 277
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 278 ILATGSADKTVALWDLRN 295
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 215 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 271
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 272 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 331
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 332 LNVWDLS---KIGEEQSA 346
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 168 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 226
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 227 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 286
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 287 ILATGSADKTVALWDLRN 304
Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 224 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 280
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 281 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 340
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 341 LNVWDLS---KIGEEQSA 355
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 158 (60.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 47 TLKGHKEAISAVQ-WTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GH +S+V D I+++S D T+K+W+ + G K TF+ H+EWV+ V
Sbjct: 16 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK------TFTGHREWVRMV 69
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSG-- 160
R + D L S S D +V++W + + + ++ HE V C++W S Y I
Sbjct: 70 RPNQ-DGTLIASCSNDQTVRVWVVATKECKA-ELREHEHVVECISWAPESSYSSISEATG 127
Query: 161 ---GQDNSVR 167
G DN VR
Sbjct: 128 SEVGHDNWVR 137
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 42/130 (32%), Positives = 66/130 (50%)
Query: 47 TLKGHKEAISAVQ-WTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GH +S+V D I+++S D T+K+W+ + G K TF+ H+EWV+ V
Sbjct: 19 TMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK------TFTGHREWVRMV 72
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSG-- 160
R + D L S S D +V++W + + + ++ HE V C++W S Y I
Sbjct: 73 RPNQ-DGTLIASCSNDQTVRVWVVATKECKA-ELREHEHVVECISWAPESSYSSISEATG 130
Query: 161 ---GQDNSVR 167
G DN VR
Sbjct: 131 SEVGHDNWVR 140
>POMBASE|SPAC4F8.11 [details] [associations]
symbol:SPAC4F8.11 "WD repeat protein, human WDR24 family"
species:4896 "Schizosaccharomyces pombe" [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC4F8.11 GO:GO:0005829 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005778 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 PIR:T38840 RefSeq:NP_593862.1
ProteinModelPortal:O14186 EnsemblFungi:SPAC4F8.11.1 GeneID:2543518
KEGG:spo:SPAC4F8.11 OrthoDB:EOG4RBTST NextBio:20804528
Uniprot:O14186
Length = 846
Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 36/115 (31%), Positives = 68/115 (59%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV- 124
++T+S D +K+WD + + + + TF + E + V +SP +P FV+A +D+ +
Sbjct: 150 VLTASQDGLIKLWDYK----ESSSTI--TFRGNSEAARDVVFSPSEPNEFVAA-YDSGIL 202
Query: 125 KLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDNSVRVF-KTKHQPKS 177
+ WD+R PK+P + H V+CVN+S ++ S G+D ++R++ T ++ KS
Sbjct: 203 QKWDIRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKS 257
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 32/130 (24%), Positives = 56/130 (43%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K P + L H + V ++ + S D T++IWD+ KK I + S
Sbjct: 211 KLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDST-SNKKKSLITINNVSP--- 266
Query: 101 WVQSVRWSPIDPQL-----FVSASF--DNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSD 153
+ VRW P + Q S+S D ++ +WD+ P +P + H+ V ++W+
Sbjct: 267 -LNCVRWRPANQQSRGSNQLASSSLVGDTAINVWDITRPYIPYRTVSCHDSIVSTMHWAS 325
Query: 154 YRYIMSGGQD 163
+ S +D
Sbjct: 326 TELLWSCSKD 335
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 153 (58.9 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 41/117 (35%), Positives = 65/117 (55%)
Query: 49 KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
KGH + + +V +++ + +II+ S D T+K+W+ LG K +H++WV +R+
Sbjct: 109 KGHTQDVMSVAFSSDNRQIISGSRDATIKVWNT-LGECK---FTLEGPEAHQDWVSCIRF 164
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQD 163
SP P + VS S+DN VK+WD++S K + H V V S D SGG+D
Sbjct: 165 SPNTPTI-VSGSWDNKVKIWDIKSFKCN-HTLTDHTGYVNTVTISPDGSLCASGGKD 219
Score = 149 (57.5 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 47/141 (33%), Positives = 69/141 (48%)
Query: 41 QKTPLIT------LKGHKEAIS--AVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVK 92
QK P +T L GH ++ AV D II+SS D T+ +W
Sbjct: 4 QKAPQVTYLEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAH 63
Query: 93 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL-RSPKVPLFDMLGHEDKVMCVNW 151
+ H +VQ V S D Q +S S+DN+++LWD+ + LF GH VM V +
Sbjct: 64 RSLKGHSHFVQDVVISH-DGQFALSGSWDNTLRLWDITKGVSTRLFK--GHTQDVMSVAF 120
Query: 152 S-DYRYIMSGGQDNSVRVFKT 171
S D R I+SG +D +++V+ T
Sbjct: 121 SSDNRQIISGSRDATIKVWNT 141
Score = 148 (57.2 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+LKGH + V + + ++ SWD+TL++WD + KG + F H + V SV
Sbjct: 65 SLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWD-----ITKGVSTR-LFKGHTQDVMSV 118
Query: 106 RWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQD 163
+S + Q+ +S S D ++K+W+ L K L H+D V C+ +S + I+SG D
Sbjct: 119 AFSSDNRQI-ISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWD 177
Query: 164 NSVRVFKTK 172
N V+++ K
Sbjct: 178 NKVKIWDIK 186
Score = 120 (47.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 47 TLKG---HKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
TL+G H++ +S ++++ I++ SWD+ +KIWD K T + H +V
Sbjct: 148 TLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDI------KSFKCNHTLTDHTGYV 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQ 162
+V SP D L S D LW+L S K PL+ L + + + +S +Y +S
Sbjct: 202 NTVTISP-DGSLCASGGKDTFACLWELSSGK-PLYK-LEARNTINALAFSPNKYWLSAAT 258
Query: 163 DNSVRVF 169
D+ + ++
Sbjct: 259 DDKIIIW 265
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 212 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 270
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 331 ILATGSADKTVALWDLRN 348
Score = 135 (52.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 268 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 324
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 325 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 384
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 385 LNVWDLS---KIGEEQSA 399
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 156 (60.0 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 39/138 (28%), Positives = 73/138 (52%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W + ++++S DHT+ +WD G K+G IV K+ F+ H
Sbjct: 212 PDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDIN-AGPKEGKIVDAKAIFTGHS 270
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 271 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 330
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 331 ILATGSADKTVALWDLRN 348
Score = 135 (52.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 37/138 (26%), Positives = 61/138 (44%)
Query: 50 GHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
GH + V W + E + S D L IWD K + + +H V + +
Sbjct: 268 GHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHL---VDAHTAEVNCLSF 324
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQDNS 165
+P + + S D +V LWDLR+ K+ L H+D++ V+WS + + S G D
Sbjct: 325 NPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRR 384
Query: 166 VRVFKTKHQPKSGQKSKA 183
+ V+ K G++ A
Sbjct: 385 LNVWDLS---KIGEEQSA 399
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 155 (59.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 44/128 (34%), Positives = 67/128 (52%)
Query: 47 TLKGH-KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH E IS T D ++T S+DHT +WD G +K ++ S H+ + V
Sbjct: 214 TLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG--RKVHVL----SGHRGEISCV 267
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM--CVNWSDYRYIMSGGQD 163
+++ D L +AS D S K+WD + L +LGH D+V+ C N++ + I + D
Sbjct: 268 QFN-WDCSLIATASLDKSCKVWDAEGGQC-LATLLGHNDEVLDVCFNYTG-QLIATASAD 324
Query: 164 NSVRVFKT 171
+ RVF T
Sbjct: 325 GTSRVFST 332
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 45 LITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L TL+GH+ + A+ + D++ T S+D T K+W AE G TF H +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFY------TFRGHTAEI 180
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKV--MCVNWSDYRYIMSG 160
+ ++P L + S D + KLWD+ S + + + GH ++ +C N + R +++G
Sbjct: 181 VCLAFNP-QSTLVATGSMDTTAKLWDVESGE-EVSTLAGHFAEIISLCFNTTGDR-LVTG 237
Query: 161 GQDNS 165
D++
Sbjct: 238 SFDHT 242
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + +GH +A+ ++++ + + S+ D HT+K+WD G M S F
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM------SEFPG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V + P + L S S D +++ WDL +V + + G V V ++ D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 157 IMSGGQDNSVRVF 169
+ SG QD S+RV+
Sbjct: 246 LYSGCQD-SLRVY 257
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + +GH +A+ ++++ + + S+ D HT+K+WD G M S F
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM------SEFPG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V + P + L S S D +++ WDL +V + + G V V ++ D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 157 IMSGGQDNSVRVF 169
+ SG QD S+RV+
Sbjct: 246 LYSGCQD-SLRVY 257
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + +GH +A+ ++++ + + S+ D HT+K+WD G M S F
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM------SEFPG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V + P + L S S D +++ WDL +V + + G V V ++ D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 157 IMSGGQDNSVRVF 169
+ SG QD S+RV+
Sbjct: 246 LYSGCQD-SLRVY 257
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 113 (44.8 bits), Expect = 0.00034, P = 0.00034
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + +GH +A+ ++++ + + S+ D HT+K+WD G M S F
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM------SEFPG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V + P + L S S D +++ WDL +V + + G V V ++ D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSVLFNPDGCC 245
Query: 157 IMSGGQDNSVRVF 169
+ SG QD S+RV+
Sbjct: 246 LYSGCQD-SLRVY 257
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/117 (35%), Positives = 64/117 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + + S S D +K+WD +KG I K + SH + V+
Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR----RKGCIFK--YKSHTQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSG 160
+R+SP D + SA+ D++VKLWDL + KV +F+ GH V V + Y ++G
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSEYPLAG 206
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH I ++Q +A +E+I + S ++++WD E A + T HK +
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE------AAKILRTLLGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P S S D +KLWD+R K +F H V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-SFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 148 (57.2 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 39 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 92
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 93 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 150
Query: 167 RVF 169
R+F
Sbjct: 151 RLF 153
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++ SG
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLLASGSS 209
Query: 163 DNSVR 167
D ++R
Sbjct: 210 DRTIR 214
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 56 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 38/133 (28%), Positives = 66/133 (49%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + +GH +A+ ++++ + + S+ D HT+K+WD G M S F
Sbjct: 134 IRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM------SEFPG 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRY 156
H V V + P + L S S D +++ WDL +V + + G V + ++ D
Sbjct: 188 HTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEPGPVRSILFNPDGCC 245
Query: 157 IMSGGQDNSVRVF 169
+ SG QD S+RV+
Sbjct: 246 LYSGCQD-SLRVY 257
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 157 (60.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 48/145 (33%), Positives = 71/145 (48%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
PL GH + V++ + T S D T+++W A+ G + F+ H V
Sbjct: 415 PLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVR------LFTGHCGPV 468
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
+ + +SP + Q VSA D +KLWDL S + D+ GH D + V +S D I S
Sbjct: 469 RCLAFSP-NGQYLVSAGEDQLLKLWDLASGTL-YKDLHGHTDDITSVTFSLDSSVIASAS 526
Query: 162 QDNSVRVF--KTKHQ--PKSGQKSK 182
DNSVR++ K+KH P G S+
Sbjct: 527 MDNSVRIWDIKSKHNSTPADGSSSE 551
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 158 (60.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 41/127 (32%), Positives = 71/127 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK +IS++ + + E + S S D +K+WD +KG + + + H + V+
Sbjct: 98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVR----RKGCVFR--YKGHTQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
+ +SP D + SAS D++VKLWDL + K+ + + H V V + Y++ SG
Sbjct: 152 CLAFSP-DGKWLASASDDSTVKLWDLIAGKM-ITEFTSHTSAVNVVQFHPNEYLLASGSA 209
Query: 163 DNSVRVF 169
D +V+++
Sbjct: 210 DRTVKLW 216
Score = 158 (60.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 37/127 (29%), Positives = 70/127 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH A+ +Q+ + +E ++ S +L++WD E A + T HK +
Sbjct: 56 IMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE------AAKILRTLMGHKASIS 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P+ L S S D+++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 110 SLDFHPMGEYL-ASGSVDSNIKLWDVRR-KGCVFRYKGHTQAVRCLAFSPDGKWLASASD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DSTVKLW 174
Score = 118 (46.6 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 40/136 (29%), Positives = 68/136 (50%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSS 97
+ +K + KGH +A+ + ++ + + S S D T+K+WD G M I + F+S
Sbjct: 134 VRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM----ITE--FTS 187
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK----VMCVNWSD 153
H V V++ P + L S S D +VKLWDL F+M+G + V V ++
Sbjct: 188 HTSAVNVVQFHP-NEYLLASGSADRTVKLWDLEK-----FNMIGSSEGETGVVRSVLFNP 241
Query: 154 YRYIMSGGQDNSVRVF 169
+ G +N++RV+
Sbjct: 242 DGSCLYSGSENTLRVY 257
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 41/125 (32%), Positives = 67/125 (53%)
Query: 49 KGHKEAI-SAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+ H + + S V + +I+SS D +K+WD + K A+ K +F H +V +
Sbjct: 96 EAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWD----NKWAM-KQSFEGHTHYVMQIAI 150
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDN 164
+P D F +AS D +VK+W S VP F + GHE V CV++ + YI+SG D+
Sbjct: 151 NPKDNNTFATASLDKTVKVWQFGS-NVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDH 209
Query: 165 SVRVF 169
V+++
Sbjct: 210 LVKIW 214
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 157 (60.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + + S S D +K+WD +KG I K + SH + V+
Sbjct: 97 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR----RKGCIFK--YKSHTQAVR 150
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
+R+SP D + SA+ D++VKLWDL + KV +F+ GH V V + Y+++ G
Sbjct: 151 CLRFSP-DGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSIEYLLASGS 208
Query: 163 DN 164
+
Sbjct: 209 SS 210
Score = 135 (52.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 36/124 (29%), Positives = 63/124 (50%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
L GH I ++Q +A +E+I + S ++++WD E A + T HK + S+
Sbjct: 58 LTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE------AAKILRTLLGHKANICSLD 111
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
+ P S S D +KLWD+R K +F H V C+ +S D +++ S D++
Sbjct: 112 FHPYG-SFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHT 169
Query: 166 VRVF 169
V+++
Sbjct: 170 VKLW 173
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 157 (60.3 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + + S S D +K+WD +KG I K + SH + V+
Sbjct: 98 LRTLLGHKANICSLDFHPYGSFVASGSLDTDIKLWDVR----RKGCIFK--YKSHTQAVR 151
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
+R+SP D + SA+ D++VKLWDL + KV +F+ GH V V + Y+++ G
Sbjct: 152 CLRFSP-DGKWLASAADDHTVKLWDLTAGKV-MFEFTGHYGPVNVVEFHPSIEYLLASGS 209
Query: 163 DN 164
+
Sbjct: 210 SS 211
Score = 138 (53.6 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 36/127 (28%), Positives = 66/127 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH I ++Q +A +E+I + S ++++WD E A + T HK +
Sbjct: 56 VMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLE------AAKILRTLLGHKANIC 109
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P S S D +KLWD+R K +F H V C+ +S D +++ S
Sbjct: 110 SLDFHPYG-SFVASGSLDTDIKLWDVRR-KGCIFKYKSHTQAVRCLRFSPDGKWLASAAD 167
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 168 DHTVKLW 174
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 154 (59.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 41/109 (37%), Positives = 59/109 (54%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL+GH + I V ++ ++ S S D T+K+WD GG+K+ T H VQ
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQ------TLEGHSSSVQ 87
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
SV +SP + QL S S D ++KLW+ S + M GH D+V V +S
Sbjct: 88 SVAFSP-NGQLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFS 134
Score = 143 (55.4 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GH + + ++ ++ S S D T+K+WD G +K T H ++S+
Sbjct: 192 TLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKH------TLEGHSNKIESL 245
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+SP + QL S S D ++KLWD + + GH D V+ V +S D + + SG DN
Sbjct: 246 AFSP-NGQLLASGSSDATIKLWDTATGSFR-HTLKGHSDMVLSVVFSPDSQLLESGSGDN 303
Query: 165 SVRVF 169
+++++
Sbjct: 304 TIKLW 308
Score = 131 (51.2 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 31/83 (37%), Positives = 46/83 (55%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH I ++ ++ +++ S S D T+K+WD G + T H + V SV
Sbjct: 234 TLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRH------TLKGHSDMVLSV 287
Query: 106 RWSPIDPQLFVSASFDNSVKLWD 128
+SP D QL S S DN++KLWD
Sbjct: 288 VFSP-DSQLLESGSGDNTIKLWD 309
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 37 QLILQKTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDAELGGMKKGAIVKS 93
QL+ + T+K A +++ T D + + ++ ++W+ +G +K
Sbjct: 96 QLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKH------ 149
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWS 152
T H +WV SV +SP D QL S S + ++KLWD S L LG H + V+ + +S
Sbjct: 150 TIEGHSDWVLSVAFSP-DGQLLASGSAEKTIKLWD--SATCGLKHTLGGHSNWVLPLVFS 206
Query: 153 -DYRYIMSGGQDNSVRVFKTKHQPKSG 178
D R + SG D +++++ P SG
Sbjct: 207 PDGRLLASGSNDATIKLW----DPPSG 229
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 157 (60.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 44 PLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ T KGH ++A++W +++ S S D TLKIW M + +H + +
Sbjct: 526 PIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWS-----MNRDRCCHD-LQAHSKEI 579
Query: 103 QSVRWSPIDPQ--------LFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+++WSP P + SASFD++V+LWD+ + + H + V V +S D
Sbjct: 580 YTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSC-IHTLTKHTEPVYSVAFSPD 638
Query: 154 YRYIMSGGQDNSVRVFKTK 172
+++ SG D V ++ T+
Sbjct: 639 GKHLASGSFDKCVHIWSTQ 657
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 154 (59.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 39/127 (30%), Positives = 73/127 (57%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+ ++++Q++ ++ S S D T+++W + +KG S F +H V+SV +S
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLD----RKGK--SSEFKAHTAPVRSVDFS 111
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D QL V+AS D S+K+W + + L+ + H V C +S D R I+S +D +++
Sbjct: 112 A-DGQLLVTASEDKSIKVWSMFRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 168 VFKTKHQ 174
++ T ++
Sbjct: 170 IWDTTNK 176
Score = 133 (51.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 47 TLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+ KGHK AI++ ++ +I T+SWD L +W +K A + HK+ V S+
Sbjct: 13 SFKGHKAAITSADFSPNCKQIATASWDTFLMLWS-----LKPHARAYR-YVGHKDVVTSL 66
Query: 106 RWSPIDPQLFVSASFDNSVKLWDL-RSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQD 163
++SP L SAS D +V+LW L R K F H V V++S D + +++ +D
Sbjct: 67 QFSP-QGNLLASASRDRTVRLWVLDRKGKSSEFK--AHTAPVRSVDFSADGQLLVTASED 123
Query: 164 NSVRVFKTKHQ 174
S++V+ Q
Sbjct: 124 KSIKVWSMFRQ 134
Score = 110 (43.8 bits), Expect = 0.00052, P = 0.00052
Identities = 33/107 (30%), Positives = 55/107 (51%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I ++ DH +KIWD M K + + H V + + P+ L V+AS D +VK
Sbjct: 201 IASAGSDHAVKIWDIR---MNK---LLQHYQVHSCGVNCLSFHPLGNSL-VTASSDGTVK 253
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKT 171
+ DL ++ ++ + GH V V++S D + SGG D V +++T
Sbjct: 254 MLDLIEGRL-IYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIWRT 299
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 154 (59.3 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 38/127 (29%), Positives = 73/127 (57%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+ +++VQ++ + ++ S S D T+++W + K+G S F +H V+SV +S
Sbjct: 58 GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPD----KRGK--SSEFKAHTAPVRSVDFS 111
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q +AS D S+K+W++ + L+ + H V C +S D R I+S +D +++
Sbjct: 112 A-DGQFLATASEDKSIKVWNMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 169
Query: 168 VFKTKHQ 174
++ T ++
Sbjct: 170 IWDTTNK 176
Score = 143 (55.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 41/141 (29%), Positives = 74/141 (52%)
Query: 38 LILQKTPLIT--LKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKKGAIVKST 94
L Q+ P++ KGHK AI++V ++ + ++ T+SWD L +W+ K
Sbjct: 2 LPFQEDPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNC------KPQARAFR 55
Query: 95 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-D 153
+ HK+ V SV++SP+ L SAS D +V+LW + + + H V V++S D
Sbjct: 56 YVGHKDVVTSVQFSPLG-NLLASASRDRTVRLW-IPDKRGKSSEFKAHTAPVRSVDFSAD 113
Query: 154 YRYIMSGGQDNSVRVFKTKHQ 174
+++ + +D S++V+ Q
Sbjct: 114 GQFLATASEDKSIKVWNMYRQ 134
Score = 121 (47.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/126 (26%), Positives = 65/126 (51%)
Query: 49 KGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
K H + +V ++A + + T+S D ++K+W+ M + + S + H WV+ ++
Sbjct: 99 KAHTAPVRSVDFSADGQFLATASEDKSIKVWN-----MYRQRFLYSLYR-HTHWVRCAKF 152
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR----YIMSGGQD 163
SP D +L VS S D ++K+WD + + + D V N+ D+ I S G D
Sbjct: 153 SP-DGRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Query: 164 NSVRVF 169
++V+++
Sbjct: 208 HTVKIW 213
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 152 (58.6 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 48 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS-HKEWVQS 104
L GH+ +S Q+ ++ +ITSS D T +WD G K ++ F S H V S
Sbjct: 152 LTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLS 209
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW--SDYRYIMSGGQ 162
V S +P F+S S D++ +LWD R+ + GHE V V + YR+ +G
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRF-GTGSD 268
Query: 163 DNSVRVF--KTKHQ 174
D + R++ +T HQ
Sbjct: 269 DGTCRLYDIRTGHQ 282
>FB|FBgn0038617 [details] [associations]
symbol:CG12333 species:7227 "Drosophila melanogaster"
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046331 HSSP:P16649
GeneTree:ENSGT00640000091456 OMA:TGLPRDM EMBL:AY094717
RefSeq:NP_650723.1 UniGene:Dm.12926 SMR:Q9VE73 IntAct:Q9VE73
MINT:MINT-1593181 EnsemblMetazoa:FBtr0083655 GeneID:42218
KEGG:dme:Dmel_CG12333 UCSC:CG12333-RA FlyBase:FBgn0038617
InParanoid:Q9VE73 OrthoDB:EOG434TNF GenomeRNAi:42218 NextBio:827735
Uniprot:Q9VE73
Length = 487
Score = 154 (59.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 41/138 (29%), Positives = 68/138 (49%)
Query: 42 KTPLITLKG---HKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
+TPL G H + A W +++D+IIT SWD T +WD E G + +
Sbjct: 265 RTPLCEFTGPGGHLSVVVAADWLSSMDQIITGSWDRTAILWDVETG------LPLQPLTG 318
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRS--PKVPLFDMLGHEDKVMCVNWSDYR 155
H + V P +L V+AS D + +LWD R P V +F GH + V ++
Sbjct: 319 HDHELTHVSAHPTQ-RLVVTASRDTTFRLWDFREAIPAVSVFQ--GHTETVTSSVFARDD 375
Query: 156 YIMSGGQDNSVRVFKTKH 173
++SG D +++V++ ++
Sbjct: 376 KVVSGSDDRTIKVWELRN 393
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 151 (58.2 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 45/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAV--QWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ T S D T+K+WD KK ++ TF + + V SV
Sbjct: 137 LKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIR----KKASV--HTFQNTYQ-VLSV 189
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ ++ M GH D V ++ S D Y++S DN
Sbjct: 190 TFNDTSDQI-ISGGIDNDIKVWDLRQNKL-IYSMQGHGDSVTGLSLSADGSYLLSNSMDN 247
Query: 165 SVRVFKTK-HQPK 176
SVRV+ + PK
Sbjct: 248 SVRVWDIRPFAPK 260
Score = 136 (52.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + ++ S S D T+ +WD+E G K H +V S
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVK------RLKGHTSFVNSC 147
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSP-KVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQD 163
+ PQL + S D +VKLWD+R V F + +V+ V ++D I+SGG D
Sbjct: 148 FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ---NTYQVLSVTFNDTSDQIISGGID 204
Query: 164 NSVRVF 169
N ++V+
Sbjct: 205 NDIKVW 210
Score = 115 (45.5 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 39/141 (27%), Positives = 68/141 (48%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
I +K + T + + +S D+II+ D+ +K+WD +++ ++ S H
Sbjct: 171 IRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWD-----LRQNKLIYS-MQGH 224
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR--SPK---VPLFDMLGH--EDKVMCVNW 151
+ V + S D +S S DNSV++WD+R +PK V +F H E ++ +W
Sbjct: 225 GDSVTGLSLSA-DGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSW 283
Query: 152 S-DYRYIMSGGQDNSVRVFKT 171
S D I +G D V ++ T
Sbjct: 284 SADGSKIAAGSADRFVYIWDT 304
>RGD|621591 [details] [associations]
symbol:Coro7 "coronin 7" species:10116 "Rattus norvegicus"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA;ISO;ISS;IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IRD]
[GO:0016021 "integral to membrane" evidence=ISO;ISS] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IRD] [GO:0051015 "actin
filament binding" evidence=IRD] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:621591 GO:GO:0016021
GO:GO:0005829 GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016023
InterPro:IPR015505 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08954 HOGENOM:HOG000006535 HOVERGEN:HBG051080 EMBL:Y15054
IPI:IPI00213071 UniGene:Rn.13808 ProteinModelPortal:O35828
PRIDE:O35828 UCSC:RGD:621591 ArrayExpress:O35828
Genevestigator:O35828 GermOnline:ENSRNOG00000004146 Uniprot:O35828
Length = 443
Score = 153 (58.9 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 36/140 (25%), Positives = 72/140 (51%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKST-FS 96
L T L TL+ + A+ + W D + + D +++W GG+K T +
Sbjct: 52 LPDTGLPTLQ-NGAAVMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLKNILTTPETVLT 110
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYR 155
H E + S+R+ P+ + S+S+D ++++WDL++ + + GH+D++ + WS D +
Sbjct: 111 GHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQA-RTEQLRLQGHQDQIFSLAWSPDGK 169
Query: 156 YIMSGGQDNSVRVFKTKHQP 175
+ + +D VRV+ + P
Sbjct: 170 QLATVCKDGRVRVYDPRSSP 189
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 33/103 (32%), Positives = 53/103 (51%)
Query: 43 TPLITLKGHKEAISAVQW--TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
TP L GH E I ++++ A D + +SS+D T++IWD + + H++
Sbjct: 104 TPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQ------ARTEQLRLQGHQD 157
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHE 143
+ S+ WSP QL + D V+++D RS +PL D G E
Sbjct: 158 QIFSLAWSPDGKQL-ATVCKDGRVRVYDPRSSPLPLQDGPGPE 199
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 152 (58.6 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 38/126 (30%), Positives = 69/126 (54%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH I ++ + T+ D IIT S+DHT+ +WDA+ G K ++ H + S
Sbjct: 214 TLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTG-RKVNILI-----GHCAEISSA 267
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM--CVNWSDYRYIMSGGQD 163
++ D L ++ S D + KLWD + K + + GH+D+++ C +++ + I + D
Sbjct: 268 SFN-WDCSLILTGSMDKTCKLWDATNGKC-VATLTGHDDEILDSCFDYTG-KLIATASAD 324
Query: 164 NSVRVF 169
+ R+F
Sbjct: 325 GTARIF 330
Score = 129 (50.5 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 45 LITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L TL+GH+ + A+ + D+I T S+D T K+W E G TF H +
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYH------TFRGHTAEI 180
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCV--NWSDYRYIMSG 160
+ ++P L + S D + KLWD+++ + ++ + GH +++ + N S R I++G
Sbjct: 181 VCLSFNP-QSTLVATGSMDTTAKLWDIQNGE-EVYTLRGHSAEIISLSFNTSGDR-IITG 237
Query: 161 GQDNSVRVF 169
D++V V+
Sbjct: 238 SFDHTVVVW 246
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 149 (57.5 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 48/165 (29%), Positives = 84/165 (50%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI++ + A + +T S H WV +V +SP D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYEVQ------HASLAATLSGHGSWVLNVAFSPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ S + + L H+D+V V ++ + I+S D + V+
Sbjct: 258 VWDV-SARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVY 301
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 153 (58.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 44/128 (34%), Positives = 68/128 (53%)
Query: 50 GHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GH + I+ V + ++ +SS D T+++W + KG + F +H V+SV +S
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSI----KGE--STVFKAHTASVRSVHFS 111
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q V+AS D SVK+W + K L+ + H + V C +S D R I S G D +VR
Sbjct: 112 R-DGQRLVTASDDKSVKVWGVERKKF-LYSLNRHTNWVRCARFSPDGRLIASCGDDRTVR 169
Query: 168 VFKTK-HQ 174
++ T HQ
Sbjct: 170 LWDTSSHQ 177
Score = 109 (43.4 bits), Expect = 0.00075, P = 0.00075
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I +S D+T+KIWD ++ +++ + H V + P L +S S D+++K
Sbjct: 201 IASSGADNTIKIWD-----IRTNKLIQH-YKVHNAGVNCFSFHPSGNYL-ISGSSDSTIK 253
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVFKT 171
+ DL ++ ++ + GH+ V+ V +S D SGG D+ V ++KT
Sbjct: 254 ILDLLEGRL-IYTLHGHKGPVLTVTFSRDGDLFASGGADSQVLMWKT 299
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 156 (60.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH I +V + A + ++ + + T+K+WD E + +V+ T + H+
Sbjct: 52 ILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLE-----EAKVVR-TLTGHRSNCV 105
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
SV + P + F S S D ++K+WD+R K + GH V + ++ D R+I+SGG+
Sbjct: 106 SVNFHPFG-EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGE 163
Query: 163 DNSVRVF 169
DN V+V+
Sbjct: 164 DNVVKVW 170
Score = 156 (60.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 40 LQKTPLI-TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSS 97
L++ ++ TL GH+ +V + E S S D LKIWD KKG I T+
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIR----KKGCI--HTYKG 141
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYI 157
H V +R++P D + VS DN VK+WDL + K+ L + HE K+ +++ + ++
Sbjct: 142 HTRGVNVLRFTP-DGRWIVSGGEDNVVKVWDLTAGKL-LHEFKSHEGKIQSLDFHPHEFL 199
Query: 158 MS-GGQDNSVR 167
++ G D +V+
Sbjct: 200 LATGSADKTVK 210
Score = 117 (46.2 bits), Expect = 0.00014, P = 0.00014
Identities = 37/134 (27%), Positives = 70/134 (52%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + T KGH ++ +++T I++ D+ +K+WD + G ++ F S
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD-----LTAGKLLHE-FKS 183
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYR 155
H+ +QS+ + P + L + S D +VK WDL + L G E V C+ ++ D +
Sbjct: 184 HEGKIQSLDFHPHE-FLLATGSADKTVKFWDLET--FELIGSGGTETTGVRCLTFNPDGK 240
Query: 156 YIMSGGQDNSVRVF 169
++ G Q+ S+++F
Sbjct: 241 SVLCGLQE-SLKIF 253
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 155 (59.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 85 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 140 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 148 (57.2 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 95 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 148
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 149 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 206
Query: 167 RVF 169
R+F
Sbjct: 207 RLF 209
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 149 (57.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 42/137 (30%), Positives = 75/137 (54%)
Query: 47 TLKGHKEAISAVQ-WTAVDE--IITSSWDHTLKIWDAE-LGGMKKGAIVKS--TFSSHKE 100
TL+GH ++ + +T D+ +++SS D T+ +WD + + + +G I + + + H
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
+V V S D Q +S S+D +++LWDL V + H V+ V +S D R I+S
Sbjct: 71 FVSDVVISS-DGQFALSGSWDKTLRLWDLNQG-VSTRQFISHTKDVLSVAFSADNRQIVS 128
Query: 160 GGQDNSVRVFKTKHQPK 176
G +D S++++ T Q K
Sbjct: 129 GSRDKSIKLWNTLAQCK 145
Score = 133 (51.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 44 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ +L GH +S V ++ + ++ SWD TL++WD + +G + F SH + V
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWD-----LNQGVSTRQ-FISHTKDV 114
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWSDYR---YIM 158
SV +S + Q+ VS S D S+KLW+ L K + D H D V V +S I+
Sbjct: 115 LSVAFSADNRQI-VSGSRDKSIKLWNTLAQCKYTITDDC-HTDWVSTVRFSPSNRDPVIV 172
Query: 159 SGGQDNSVRVF 169
S G D V+V+
Sbjct: 173 SAGWDKVVKVW 183
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 46 ITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
IT H + +S V+++ + I+++ WD +K+W+ LG + +K+ H +V
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN--LGNCR----LKTNHIGHTGYV 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQ 162
+V SP D L S D LWDL K L+ + G+ D + +++S RY +
Sbjct: 202 NTVTVSP-DGSLCASGGKDGQAMLWDLNEGK-HLYTLPGN-DVINAMSFSPNRYWLCAAV 258
Query: 163 DNSVRVF 169
+S++++
Sbjct: 259 GSSIKIW 265
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 149 (57.5 bits), Expect = 4.4e-10, P = 4.4e-10
Identities = 42/137 (30%), Positives = 75/137 (54%)
Query: 47 TLKGHKEAISAVQ-WTAVDE--IITSSWDHTLKIWDAE-LGGMKKGAIVKS--TFSSHKE 100
TL+GH ++ + +T D+ +++SS D T+ +WD + + + +G I + + + H
Sbjct: 11 TLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNH 70
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMS 159
+V V S D Q +S S+D +++LWDL V + H V+ V +S D R I+S
Sbjct: 71 FVSDVVISS-DGQFALSGSWDKTLRLWDLNQG-VSTRQFISHTKDVLSVAFSADNRQIVS 128
Query: 160 GGQDNSVRVFKTKHQPK 176
G +D S++++ T Q K
Sbjct: 129 GSRDKSIKLWNTLAQCK 145
Score = 133 (51.9 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 44/131 (33%), Positives = 68/131 (51%)
Query: 44 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ +L GH +S V ++ + ++ SWD TL++WD + +G + F SH + V
Sbjct: 61 PVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWD-----LNQGVSTRQ-FISHTKDV 114
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWSDYR---YIM 158
SV +S + Q+ VS S D S+KLW+ L K + D H D V V +S I+
Sbjct: 115 LSVAFSADNRQI-VSGSRDKSIKLWNTLAQCKYTITDDC-HTDWVSTVRFSPSNRDPVIV 172
Query: 159 SGGQDNSVRVF 169
S G D V+V+
Sbjct: 173 SAGWDKVVKVW 183
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 34/127 (26%), Positives = 64/127 (50%)
Query: 46 ITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
IT H + +S V+++ + I+++ WD +K+W+ LG + +K+ H +V
Sbjct: 148 ITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWN--LGNCR----LKTNHIGHTGYV 201
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQ 162
+V SP D L S D LWDL K L+ + G+ D + +++S RY +
Sbjct: 202 NTVTVSP-DGSLCASGGKDGQAMLWDLNEGK-HLYTLPGN-DVINAMSFSPNRYWLCAAV 258
Query: 163 DNSVRVF 169
+S++++
Sbjct: 259 GSSIKIW 265
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 150 (57.9 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+A++ V ++ ++ S S D T++IW + KG + F +H V+SV +
Sbjct: 90 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNI----KGE--STVFRAHTATVRSVHFC 143
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q FV+AS D ++K+W K LF + H + V C +S D R I+S D +V+
Sbjct: 144 S-DGQSFVTASDDKTIKVWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 201
Query: 168 VF-KTKHQ 174
++ KT +
Sbjct: 202 LWDKTSRE 209
Score = 122 (48.0 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 36/126 (28%), Positives = 63/126 (50%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+ H + +V + + + +T+S D T+K+W +K + S H WV+ ++
Sbjct: 131 RAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTH---RQKFLF---SLSQHINWVRCAKF 184
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSV 166
SP D +L VSAS D +VKLWD S + + H V V++ + + G DN+V
Sbjct: 185 SP-DGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTV 242
Query: 167 RVFKTK 172
+V+ +
Sbjct: 243 KVWDVR 248
Score = 107 (42.7 bits), Expect = 0.00083, P = 0.00083
Identities = 34/128 (26%), Positives = 63/128 (49%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
KGH++A++ V ++ + ++ + S D L +W MK + F+ HK+ V V +
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWH-----MKPQSRAYR-FTGHKDAVTCVNF 100
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQDNSV 166
SP L S S D +V++W + + K H V V++ SD + ++ D ++
Sbjct: 101 SP-SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTI 158
Query: 167 RVFKTKHQ 174
+V+ T Q
Sbjct: 159 KVWSTHRQ 166
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 158 (60.7 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 38/127 (29%), Positives = 75/127 (59%)
Query: 45 LITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL+GH +++ +V ++ ++ +SS D T+K+W++ G +++ TF H W++
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQ------TFKGHDLWIR 1006
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
+V +SP D + VS S DN++KLWDL + ++ + H V V +S D + + S
Sbjct: 1007 AVAFSP-DGKHLVSGSDDNTIKLWDLATSELQQ-SLEDHSRSVHAVAFSPDDKQLASSSL 1064
Query: 163 DNSVRVF 169
D++++++
Sbjct: 1065 DSTIKLW 1071
Score = 149 (57.5 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 43/141 (30%), Positives = 73/141 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL+GH + I +V ++ +++ S S+D T K+WD G + + F H +WV+
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQ------IFEGHSKWVE 1216
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQD 163
SV +SP D +L S+S+ ++KLWD + + L L D+ + + G +
Sbjct: 1217 SVAFSP-DGKLLASSSYGETIKLWDPVTGE--LLQTLNDPDE----SAGSVAFSPDGNRL 1269
Query: 164 NSVRVFKTK-HQPKSGQKSKA 183
SV +F TK P +G+ +A
Sbjct: 1270 ASVDIFDTKIWDPATGELLQA 1290
Score = 147 (56.8 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 37/125 (29%), Positives = 73/125 (58%)
Query: 47 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L+ H ++ AV ++ D ++ +SS D T+K+WD+ G +++ T H + V+SV
Sbjct: 1039 SLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQR------TLEGHSQGVRSV 1092
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+SP D +L S S+D ++KLW+ + ++ + G D V V +S D + + SG D+
Sbjct: 1093 TFSP-DGKLLASNSYDGTIKLWNPLTGELQQ-TLTGRSDWVDSVAFSPDGKQLASGYYDS 1150
Query: 165 SVRVF 169
+++++
Sbjct: 1151 TIKLW 1155
Score = 141 (54.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 41/128 (32%), Positives = 74/128 (57%)
Query: 45 LITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L T +GH +I +V + A D E+ ++S D T+KIWD G +++ T SH + V
Sbjct: 827 LQTFEGHPHSIWSVAF-APDGKELASASDDSTIKIWDLATGELQQ------TLDSHSQSV 879
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
+SV +SP D +L S+S D+++K+W+ + ++ + G V V +S D + + SG
Sbjct: 880 RSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQ-SLEGRSGWVKSVAFSPDGKKLASGS 937
Query: 162 QDNSVRVF 169
+ N+V+++
Sbjct: 938 EKNTVKLW 945
Score = 138 (53.6 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 34/125 (27%), Positives = 68/125 (54%)
Query: 47 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+ H + +V ++ ++++ S+D T+KIWD G + + T H V+S+
Sbjct: 745 TLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQ------TLDGHSGTVESL 798
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+SP D +L S S+DN++ LWD + ++ L GH + V ++ D + + S D+
Sbjct: 799 AFSP-DGKLLASGSYDNTIDLWDSATGEL-LQTFEGHPHSIWSVAFAPDGKELASASDDS 856
Query: 165 SVRVF 169
+++++
Sbjct: 857 TIKIW 861
Score = 132 (51.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/127 (26%), Positives = 69/127 (54%)
Query: 47 TLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL H +++ +V ++ +++ +SS D T+K+W+ G +++ + WV+SV
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQ------SLEGRSGWVKSV 924
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+SP D + S S N+VKLW+ + ++ L + GH V V +S D + + S D
Sbjct: 925 AFSP-DGKKLASGSEKNTVKLWNPATGEL-LQTLEGHSQSVRSVAFSPDGKQLASSSSDT 982
Query: 165 SVRVFKT 171
+++++ +
Sbjct: 983 TIKLWNS 989
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 35/126 (27%), Positives = 67/126 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL G + + +V ++ + + S + D T+K+WD+ G + + T H + +QSV
Sbjct: 1123 TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQ------TLEGHSDRIQSV 1176
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKV-PLFDMLGHEDKVMCVNWS-DYRYIMSGGQD 163
+SP D +L S S+D + KLWD + ++ +F+ GH V V +S D + + S
Sbjct: 1177 VFSP-DGKLLASGSYDQTAKLWDPATGELLQIFE--GHSKWVESVAFSPDGKLLASSSYG 1233
Query: 164 NSVRVF 169
+++++
Sbjct: 1234 ETIKLW 1239
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 152 (58.6 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 349 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 400
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 401 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 456
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 457 ISSSHDDTILIWDFLNVPPSAQ 478
Score = 136 (52.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L L GH ++ +Q+ DE I+T S D T+++WD G V +T H E V
Sbjct: 224 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLNTLIHHNEAV 274
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNWSDYRYIMSG 160
+R+S L V+ S D S+ +WD+ S + L +L GH V V++ D +YI+S
Sbjct: 275 LHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD-KYIVSA 330
Query: 161 GQDNSVRVFKT 171
D +++V+ T
Sbjct: 331 SGDRTIKVWST 341
>UNIPROTKB|C9JXA5 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 HOGENOM:HOG000176356 HGNC:HGNC:4398
IPI:IPI00790302 ProteinModelPortal:C9JXA5 SMR:C9JXA5 STRING:C9JXA5
PRIDE:C9JXA5 Ensembl:ENST00000451587 ArrayExpress:C9JXA5
Bgee:C9JXA5 Uniprot:C9JXA5
Length = 251
Score = 145 (56.1 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNS 165
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDA 248
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 152 (58.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 366 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 417
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 418 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 473
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 474 ISSSHDDTILIWDFLNVPPSAQ 495
Score = 139 (54.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 232 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 282
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 283 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 340 DD-KYIVSASGDRTIKVWST 358
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 152 (58.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 366 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 417
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 418 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 473
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 474 ISSSHDDTILIWDFLNVPPSAQ 495
Score = 139 (54.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 232 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 282
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 283 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 339
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 340 DD-KYIVSASGDRTIKVWST 358
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 151 (58.2 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 44 PLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P+ GH A+ W+ ++T + +W G + + F H
Sbjct: 205 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSG--SWHVDQRPFVGHTRS 262
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLR---SPKVPLFDMLGHEDKVMCVNWSDYR-YI 157
V+ ++WSP + +F S S D S+++WD+R S L H V ++WS ++
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPFL 322
Query: 158 MSGGQDNSVRVFKTKHQPKSG 178
+SGG D +++V+ + Q KSG
Sbjct: 323 LSGGDDGALKVWDLR-QFKSG 342
Score = 129 (50.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITSSWDH-TLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L T H ++ + W+ + + S D LK+WD L K G+ V +TF H V
Sbjct: 300 LTTPAAHNGDVNVISWSRQEPFLLSGGDDGALKVWD--LRQFKSGSPV-ATFKQHVAPVT 356
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVP 135
SV W P D +F ++ DN + WDL + P
Sbjct: 357 SVEWHPQDSGVFAASGADNQITQWDLAVERDP 388
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 152 (58.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 383 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 434
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 435 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 490
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 491 ISSSHDDTILIWDFLNVPPSAQ 512
Score = 136 (52.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L L GH ++ +Q+ DE I+T S D T+++WD G V +T H E V
Sbjct: 258 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLNTLIHHNEAV 308
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNWSDYRYIMSG 160
+R+S L V+ S D S+ +WD+ S + L +L GH V V++ D +YI+S
Sbjct: 309 LHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD-KYIVSA 364
Query: 161 GQDNSVRVFKT 171
D +++V+ T
Sbjct: 365 SGDRTIKVWST 375
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 155 (59.6 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 85 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 139
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 140 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 185
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 152 (58.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 385 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 436
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 437 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 492
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 493 ISSSHDDTILIWDFLNVPPSAQ 514
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 251 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 301
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 302 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 358
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 359 DD-KYIVSASGDRTIKVWST 377
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 152 (58.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 386 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 437
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 438 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 493
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 494 ISSSHDDTILIWDFLNVPPSAQ 515
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 252 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 302
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 303 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 359
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 360 DD-KYIVSASGDRTIKVWST 378
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 148 (57.2 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 42/128 (32%), Positives = 69/128 (53%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+A++ V ++ ++ S S D T++IW + KG + F +H V+SV +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGE--STVFRAHTATVRSVHFC 112
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D QL V+AS D +VK+W + LF + H + V C +S D R I+S D +V+
Sbjct: 113 S-DGQLLVTASDDKTVKVWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 168 VF-KTKHQ 174
++ KT +
Sbjct: 171 LWDKTSRE 178
Score = 126 (49.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/126 (29%), Positives = 65/126 (51%)
Query: 49 KGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+ H + +V + + ++ +T+S D T+K+W ++ + T H WV+ ++
Sbjct: 100 RAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTH----RQRFLFSLT--QHINWVRCAKF 153
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSV 166
SP D +L VSAS D +VKLWD S + + H V V++ I + G DN+V
Sbjct: 154 SP-DGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 167 RVFKTK 172
+V+ T+
Sbjct: 212 KVWDTR 217
Score = 117 (46.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
KGH++A++ V ++ + + S D TL IW MK + F+ HK+ V V +
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWH-----MKPQSRAYR-FTGHKDAVTCVNF 69
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQDNSV 166
SP L S S D +V++W + + K H V V++ SD + +++ D +V
Sbjct: 70 SP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTV 127
Query: 167 RVFKTKHQ 174
+V+ T Q
Sbjct: 128 KVWSTHRQ 135
Score = 111 (44.1 bits), Expect = 0.00021, P = 0.00021
Identities = 23/76 (30%), Positives = 46/76 (60%)
Query: 95 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154
F H++ V V +S ++ + S S D+++ +W ++ P+ + GH+D V CVN+S
Sbjct: 15 FKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMK-PQSRAYRFTGHKDAVTCVNFSPS 72
Query: 155 RYIM-SGGQDNSVRVF 169
+++ SG +D +VR++
Sbjct: 73 GHLLASGSRDKTVRIW 88
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 150 (57.9 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 43/128 (33%), Positives = 69/128 (53%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+A++ V ++ ++ S S D T++IW + KG + F +H V+SV +
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNV----KGE--STVFRAHTATVRSVHFC 112
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q FV+AS D +VK+W K LF + H + V C +S D R I+S D +V+
Sbjct: 113 S-DGQSFVTASDDKTVKVWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVK 170
Query: 168 VF-KTKHQ 174
++ KT +
Sbjct: 171 LWDKTSRE 178
Score = 122 (48.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/126 (29%), Positives = 63/126 (50%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+ H + +V + + + +T+S D T+K+W +K + S H WV+ ++
Sbjct: 100 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWSTH---RQKFLF---SLSQHINWVRCAKF 153
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSV 166
SP D +L VSAS D +VKLWD S + + H V V++ I + G DN+V
Sbjct: 154 SP-DGRLIVSASDDKTVKLWDKTSREC-VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV 211
Query: 167 RVFKTK 172
+V+ +
Sbjct: 212 KVWDVR 217
Score = 116 (45.9 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 26/76 (34%), Positives = 45/76 (59%)
Query: 95 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154
F H++ V SV +S QL S S D+ + +W ++ P+ + GH+D V CVN+S
Sbjct: 15 FKGHRDAVTSVDFSLNTKQL-ASGSMDSCLMVWHMK-PQTRAYRFAGHKDAVTCVNFSPS 72
Query: 155 RYIM-SGGQDNSVRVF 169
+++ SG +D +VR++
Sbjct: 73 GHLLASGSRDKTVRIW 88
Score = 109 (43.4 bits), Expect = 0.00056, P = 0.00056
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
KGH++A+++V ++ ++ + S D L +W MK F+ HK+ V V +
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWH-----MKPQTRAYR-FAGHKDAVTCVNF 69
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQDNSV 166
SP L S S D +V++W + + K H V V++ SD + ++ D +V
Sbjct: 70 SP-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTV 127
Query: 167 RVFKTKHQ 174
+V+ T Q
Sbjct: 128 KVWSTHRQ 135
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 148 (57.2 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 44/121 (36%), Positives = 67/121 (55%)
Query: 50 GH-KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GH K+ +S T +I+++S D T+K+W+ LG K S HKEWV VR+S
Sbjct: 103 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECK---YTISEADGHKEWVSCVRFS 158
Query: 109 P--IDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
P + P + VSAS+D +VK+W+L++ K+ + GH + V S D SGG+D
Sbjct: 159 PNTLVPTI-VSASWDKTVKVWNLQNCKLRN-TLAGHSGYLNTVAVSPDGSLCASGGKDGV 216
Query: 166 V 166
+
Sbjct: 217 I 217
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 40/124 (32%), Positives = 66/124 (53%)
Query: 50 GHKEAISAVQW---TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
GHKE +S V++ T V I+++SWD T+K+W+ L K +++T + H ++ +V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN--LQNCK----LRNTLAGHSGYLNTVA 200
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDM-LGHEDKVMCVNWSDYRYIMSGGQDNS 165
SP D L S D + LWDL K L+ + G +C +S RY + +NS
Sbjct: 201 VSP-DGSLCASGGKDGVILLWDLAEGK-KLYSLEAGSIIHSLC--FSPNRYWLCAATENS 256
Query: 166 VRVF 169
+R++
Sbjct: 257 IRIW 260
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 38/129 (29%), Positives = 67/129 (51%)
Query: 47 TLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
T+ H + ++A+ T VD I+TSS D ++ +W G + + + H +VQ
Sbjct: 10 TMCAHTDMVTAIA-TPVDNSDVIVTSSRDKSIILWKLTKEDKSYG-VAQRRMTGHSHFVQ 67
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
V S D Q +S S+D ++LWDL + + +GH V+ V +S D R I+S +
Sbjct: 68 DVVLSS-DGQFALSGSWDGELRLWDLATGESTR-RFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 163 DNSVRVFKT 171
D +++++ T
Sbjct: 126 DRTIKLWNT 134
Score = 124 (48.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 38/131 (29%), Positives = 66/131 (50%)
Query: 48 LKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+ GH + V ++ + ++ SWD L++WD G + F H + V SV
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR------RFVGHTKDVLSVA 112
Query: 107 WSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWSDYRY---IMSGGQ 162
+S + Q+ VSAS D ++KLW+ L K + + GH++ V CV +S I+S
Sbjct: 113 FSTDNRQI-VSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASW 171
Query: 163 DNSVRVFKTKH 173
D +V+V+ ++
Sbjct: 172 DKTVKVWNLQN 182
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 152 (58.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 449
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 450 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 505
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 506 ISSSHDDTILIWDFLNVPPSAQ 527
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 264 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 314
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 315 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 372 DD-KYIVSASGDRTIKVWST 390
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 152 (58.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 449
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 450 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 505
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 506 ISSSHDDTILIWDFLNVPPSAQ 527
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 39 ILQKTPLITLK---GHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKS 93
I KT L LK GH ++ +Q+ DE I+T S D T+++WD G V +
Sbjct: 264 IWDKTSLECLKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLN 314
Query: 94 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNW 151
T H E V +R+S L V+ S D S+ +WD+ S + L +L GH V V++
Sbjct: 315 TLIHHNEAVLHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF 371
Query: 152 SDYRYIMSGGQDNSVRVFKT 171
D +YI+S D +++V+ T
Sbjct: 372 DD-KYIVSASGDRTIKVWST 390
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 152 (58.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 39/142 (27%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 398 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 449
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 450 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 505
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + P S Q
Sbjct: 506 ISSSHDDTILIWDFLNVPPSAQ 527
Score = 136 (52.9 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L L GH ++ +Q+ DE I+T S D T+++WD G V +T H E V
Sbjct: 273 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVNTGE------VLNTLIHHNEAV 323
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNWSDYRYIMSG 160
+R+S L V+ S D S+ +WD+ S + L +L GH V V++ D +YI+S
Sbjct: 324 LHLRFSN---GLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDFDD-KYIVSA 379
Query: 161 GQDNSVRVFKT 171
D +++V+ T
Sbjct: 380 SGDRTIKVWST 390
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 155 (59.6 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD + KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWD----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GHE V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Score = 113 (44.8 bits), Expect = 0.00052, P = 0.00052
Identities = 32/125 (25%), Positives = 61/125 (48%)
Query: 49 KGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+GH + + D + ++S D T+K+W +LG T H++ V +
Sbjct: 139 EGHTHYVMQIVINPKDNNQFASASLDRTIKVW--QLGSSSPNF----TLEGHEKGVNCID 192
Query: 107 W-SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+ S D +S + D VK+WD ++ K + + GH V CV++ + I++G +D
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCVSFHPELPIIITGSEDG 251
Query: 165 SVRVF 169
+VR++
Sbjct: 252 TVRIW 256
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 155 (59.6 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 37/107 (34%), Positives = 57/107 (53%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+TSS D +K+WD E KK + F H +V + +P D F SAS D ++K
Sbjct: 114 ILTSSDDMLIKLWDWE----KKWSC-SQVFEGHTHYVMQIVINPKDNNQFASASLDRTIK 168
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNW---SDYRYIMSGGQDNSVRVF 169
+W L S P F + GH+ V C+++ D Y++SG D V+++
Sbjct: 169 VWQLGSSS-PNFTLEGHDKGVNCIDYYSGGDKPYLISGADDRLVKIW 214
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 33/125 (26%), Positives = 60/125 (48%)
Query: 49 KGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
+GH + + D + ++S D T+K+W +LG T H + V +
Sbjct: 139 EGHTHYVMQIVINPKDNNQFASASLDRTIKVW--QLGSSSPNF----TLEGHDKGVNCID 192
Query: 107 W-SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
+ S D +S + D VK+WD ++ K + + GH V CVN+ + I++G +D
Sbjct: 193 YYSGGDKPYLISGADDRLVKIWDYQN-KTCVQTLEGHAQNVSCVNFHPELPIIITGSEDG 251
Query: 165 SVRVF 169
+VR++
Sbjct: 252 TVRIW 256
>CGD|CAL0000686 [details] [associations]
symbol:PEX7 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA;ISO] [GO:0016560
"protein import into peroxisome matrix, docking" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000686 GO:GO:0005829 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 116 (45.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS--DYRYIMSGGQ 162
+ WS I V AS D ++KL+DL P P+ + H +V CVNW+ D +SG
Sbjct: 66 IAWSEIHENQAVVASGDGTLKLFDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSW 125
Query: 163 DNSVRVFKTKHQPKS 177
D +++++ + ++P+S
Sbjct: 126 DGNIKLW-SPNRPQS 139
Score = 115 (45.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHED-KVMCVNWSDYR--YIM 158
+ S ++SP P + VS + + V++WD+RSP H + + V+W+ Y+ I
Sbjct: 187 IYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKSTVIA 246
Query: 159 SGGQDNSVRVFKTKHQPKSGQ 179
SGG D SVR++ + K Q
Sbjct: 247 SGGTDKSVRIWDLRSITKIDQ 267
Score = 109 (43.4 bits), Expect = 0.00051, P = 0.00051
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 21 LLTLTNIE--VTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLK 76
L ++T I+ + P I TPL L GH+ A+ VQW+ + E++++S+D T +
Sbjct: 259 LRSITKIDQPIAQSPMASGHIRGPTPLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTAR 318
Query: 77 IWDAELG------GMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSVKLWD 128
IW+ E + G + K F HKE+V +S +P + +D V +WD
Sbjct: 319 IWNDESDERARFLNSRVGGL-KGVFGRHKEFVIGSDYSLWGEPGWVATTGWDEMVYIWD 376
Score = 82 (33.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 36 FQLILQKTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIW 78
F L + P++ K H + V W VD+ ++ SWD +K+W
Sbjct: 88 FDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSWDGNIKLW 132
Score = 66 (28.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 129 LRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQPKS 177
+R P PL +++GHE V V WS + + +MS D + R++ + ++
Sbjct: 279 IRGP-TPLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERA 328
>UNIPROTKB|Q59WW3 [details] [associations]
symbol:PEX7 "Potential intraperoxisomal protein receptor
Pex7" species:237561 "Candida albicans SC5314" [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0016560 "protein import into peroxisome matrix,
docking" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000686 GO:GO:0005829
GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000106 EMBL:AACQ01000112 GO:GO:0016560 KO:K13341
GO:GO:0005053 PANTHER:PTHR22850:SF4 eggNOG:NOG320380
RefSeq:XP_714022.1 RefSeq:XP_714298.1 ProteinModelPortal:Q59WW3
STRING:Q59WW3 GeneID:3644027 GeneID:3644322 KEGG:cal:CaO19.7735
KEGG:cal:CaO19.89 Uniprot:Q59WW3
Length = 380
Score = 116 (45.9 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS--DYRYIMSGGQ 162
+ WS I V AS D ++KL+DL P P+ + H +V CVNW+ D +SG
Sbjct: 66 IAWSEIHENQAVVASGDGTLKLFDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSW 125
Query: 163 DNSVRVFKTKHQPKS 177
D +++++ + ++P+S
Sbjct: 126 DGNIKLW-SPNRPQS 139
Score = 115 (45.5 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHED-KVMCVNWSDYR--YIM 158
+ S ++SP P + VS + + V++WD+RSP H + + V+W+ Y+ I
Sbjct: 187 IYSAQFSPHSPSMVVSCNGGSQVQVWDVRSPNPLQLKFTAHGGLEALSVDWNKYKSTVIA 246
Query: 159 SGGQDNSVRVFKTKHQPKSGQ 179
SGG D SVR++ + K Q
Sbjct: 247 SGGTDKSVRIWDLRSITKIDQ 267
Score = 109 (43.4 bits), Expect = 0.00051, P = 0.00051
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 21 LLTLTNIE--VTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLK 76
L ++T I+ + P I TPL L GH+ A+ VQW+ + E++++S+D T +
Sbjct: 259 LRSITKIDQPIAQSPMASGHIRGPTPLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTAR 318
Query: 77 IWDAELG------GMKKGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVSASFDNSVKLWD 128
IW+ E + G + K F HKE+V +S +P + +D V +WD
Sbjct: 319 IWNDESDERARFLNSRVGGL-KGVFGRHKEFVIGSDYSLWGEPGWVATTGWDEMVYIWD 376
Score = 82 (33.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 36 FQLILQKTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIW 78
F L + P++ K H + V W VD+ ++ SWD +K+W
Sbjct: 88 FDLTVPNFPVMNWKEHSREVFCVNWNLVDKTNFVSGSWDGNIKLW 132
Score = 66 (28.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 129 LRSPKVPLFDMLGHEDKVMCVNWSDY--RYIMSGGQDNSVRVFKTKHQPKS 177
+R P PL +++GHE V V WS + + +MS D + R++ + ++
Sbjct: 279 IRGP-TPLNELIGHEFAVRRVQWSPHNPKELMSTSYDMTARIWNDESDERA 328
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 150 (57.9 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 250
Query: 167 RVF 169
R+F
Sbjct: 251 RLF 253
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 250
Query: 167 RVF 169
R+F
Sbjct: 251 RLF 253
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 250
Query: 167 RVF 169
R+F
Sbjct: 251 RLF 253
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 250
Query: 167 RVF 169
R+F
Sbjct: 251 RLF 253
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 148 (57.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
L GH +S ++ ++IITSS D T +WD E G G F+ H V S+
Sbjct: 139 LPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVG------FAGHSGDVMSLSL 192
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSGGQDNSV- 166
+P D + FVS + D S+KLWD+R +GHE + V + Y + G D++
Sbjct: 193 AP-DGRTFVSGACDASIKLWDVRDSMCRQ-TFIGHESDINAVAFFPNGYAFTTGSDDATC 250
Query: 167 RVF 169
R+F
Sbjct: 251 RLF 253
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 149 (57.5 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 44/133 (33%), Positives = 67/133 (50%)
Query: 48 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTF-SSHKEWVQS 104
L GHK +S+ Q+ E +ITSS D T +WD G ++ +I F S H V S
Sbjct: 153 LTGHKGYVSSCQYVPDQETRLITSSGDQTCVLWDVTTG--QRISIFGGEFPSGHTADVLS 210
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW-SDYRYIMSGGQD 163
+ + + +FVS S D +V+LWD+R + GHE + V + D + +G D
Sbjct: 211 LSINSSNSNMFVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDD 270
Query: 164 NSVRVF--KTKHQ 174
+ R+F +T HQ
Sbjct: 271 GTCRLFDVRTGHQ 283
>MGI|MGI:1920393 [details] [associations]
symbol:Wdr37 "WD repeat domain 37" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920393 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00640000091456
EMBL:AK129254 EMBL:AK032582 EMBL:AK036203 EMBL:BC046236
IPI:IPI00387421 RefSeq:NP_001034477.1 RefSeq:NP_766033.1
UniGene:Mm.284654 ProteinModelPortal:Q8CBE3 SMR:Q8CBE3
IntAct:Q8CBE3 STRING:Q8CBE3 PhosphoSite:Q8CBE3 PaxDb:Q8CBE3
PRIDE:Q8CBE3 Ensembl:ENSMUST00000021572 Ensembl:ENSMUST00000054251
GeneID:207615 KEGG:mmu:207615 UCSC:uc007pki.1 CTD:22884
HOGENOM:HOG000013185 HOVERGEN:HBG057072 InParanoid:Q8CBE3
OMA:TGLPRDM OrthoDB:EOG4DZ1V5 NextBio:371979 Bgee:Q8CBE3
CleanEx:MM_WDR37 Genevestigator:Q8CBE3
GermOnline:ENSMUSG00000021147 Uniprot:Q8CBE3
Length = 496
Score = 151 (58.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 37/134 (27%), Positives = 67/134 (50%)
Query: 42 KTPLITLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
+ PL +LK H+ + A W +++T+SWD T ++D E +V S + H +
Sbjct: 273 RVPLTSLKSHQGVVIAADWLVGGKQVVTASWDRTANLYDVETS-----ELVHS-LTGHDQ 326
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNWSDYRYIMS 159
+ P +L V++S D + +LWD R P + ++ GH D V ++ ++S
Sbjct: 327 ELTHCCTHPTQ-RLVVTSSRDTTFRLWDFRDPSIHSVNVFQGHTDTVTSAVFTVGDNVVS 385
Query: 160 GGQDNSVRVFKTKH 173
G D +V+V+ K+
Sbjct: 386 GSDDRTVKVWDLKN 399
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 37/115 (32%), Positives = 62/115 (53%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL GHK I ++ + E + S S D +K+WD +KG + + + H + V+
Sbjct: 102 LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIR----RKGCVFR--YRGHSQAVR 155
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM 158
+R+SP D + SA+ D++VKLWDL + K+ + + GH V V + Y++
Sbjct: 156 CLRFSP-DGKWLASAADDHTVKLWDLTAGKM-MSEFPGHTGPVNVVEFHPNEYLL 208
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 35/127 (27%), Positives = 67/127 (52%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH + +V+ +E+I + S ++++WD E A + T HK +
Sbjct: 60 IMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE------AAKILRTLMGHKANIC 113
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
S+ + P + S S D ++KLWD+R K +F GH V C+ +S D +++ S
Sbjct: 114 SLDFHPYG-EFVASGSQDTNIKLWDIRR-KGCVFRYRGHSQAVRCLRFSPDGKWLASAAD 171
Query: 163 DNSVRVF 169
D++V+++
Sbjct: 172 DHTVKLW 178
Score = 107 (42.7 bits), Expect = 0.00023, P = 0.00023
Identities = 27/110 (24%), Positives = 57/110 (51%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+ T D + +W K I+ T H V+SVR + + +L V+ S S++
Sbjct: 40 LATGGDDCRVNLWSIN----KPNCIMSLT--GHTSPVESVRLNTPE-ELIVAGSQSGSIR 92
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSVRVFKTKHQ 174
+WDL + K+ L ++GH+ + +++ Y ++ SG QD +++++ + +
Sbjct: 93 VWDLEAAKI-LRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 141
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 149 (57.5 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 134 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 192
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 193 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 252
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 253 ILATGSADKTVALWDLRN 270
Score = 144 (55.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 171 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 227
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 228 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 284
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 285 IFQVQWSPHNETILASSGTDRRLNVW 310
Score = 114 (45.2 bits), Expect = 0.00012, P = 0.00012
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 230 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 284
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 285 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 344
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 345 FSWNPNEPWVICSVSEDNIMQVWQ 368
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 147 (56.8 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 44 PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
P+ GH+ IS V +++ I+++S D TLK+WD E G + K T H +
Sbjct: 63 PVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIK------TLIGHTNYA 116
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
V ++P + VS SFD +V++WD+ + K L + H D V V+++ D I+S
Sbjct: 117 FCVNFNP-QSNMIVSGSFDETVRIWDVTTGKC-LKVLPAHSDPVTAVDFNRDGSLIVSSS 174
Query: 162 QDNSVRVF 169
D R++
Sbjct: 175 YDGLCRIW 182
Score = 141 (54.7 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 38/132 (28%), Positives = 71/132 (53%)
Query: 43 TPLI---TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSH 98
TP + TL H A+S+V++++ ++ S S D T++ + V+ F+ H
Sbjct: 12 TPYVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQE-FTGH 70
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYI 157
+ + V +S D + VSAS D ++KLWD+ + + + ++GH + CVN++ I
Sbjct: 71 ENGISDVAFSS-DARFIVSASDDKTLKLWDVETGSL-IKTLIGHTNYAFCVNFNPQSNMI 128
Query: 158 MSGGQDNSVRVF 169
+SG D +VR++
Sbjct: 129 VSGSFDETVRIW 140
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 147 (56.8 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 43/130 (33%), Positives = 69/130 (53%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
L GHK+A+ VQ++ ++ S S D T+ +W + KG + F +H V+SV
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSV----KGE--STVFKAHTATVRSVH 111
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNS 165
+S D Q V+AS D ++K+W + K LF + H + V C +S D R I S D +
Sbjct: 112 FSS-DGQSLVTASDDKTIKVWTVHRQKF-LFSLSQHINWVRCARFSPDGRLIASASDDKT 169
Query: 166 VRVF-KTKHQ 174
V+++ KT +
Sbjct: 170 VKLWDKTSRE 179
Score = 116 (45.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 25/73 (34%), Positives = 46/73 (63%)
Query: 95 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY 154
F H++ + SV +S QL S S D+ +K+W ++ P++ + ++GH+D VMCV +S
Sbjct: 16 FRGHRDAITSVDFSLNKKQL-ASGSMDSCLKIWSMK-PQMRAYCLVGHKDAVMCVQFSPS 73
Query: 155 RYIM-SGGQDNSV 166
+++ SG +D +V
Sbjct: 74 GHLVASGSRDKTV 86
Score = 116 (45.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/126 (28%), Positives = 61/126 (48%)
Query: 49 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
K H + +V +++ + ++T+S D T+K+W +K + S H WV+ R+
Sbjct: 101 KAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVH---RQKFLF---SLSQHINWVRCARF 154
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY-RYIMSGGQDNSV 166
SP D +L SAS D +VKLWD S + + H V + I + G D +V
Sbjct: 155 SP-DGRLIASASDDKTVKLWDKTSREC-IHSFCEHGGFANHVEFHPSGTCIAAAGTDKTV 212
Query: 167 RVFKTK 172
+V+ +
Sbjct: 213 KVWDVR 218
Score = 110 (43.8 bits), Expect = 0.00027, P = 0.00027
Identities = 31/107 (28%), Positives = 54/107 (50%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I + D T+K+WD + + + + H V S+ + P L ++AS D+++K
Sbjct: 203 IAAAGTDKTVKVWDVRMNRLLQH------YQVHTAAVNSLSFHPSGNYL-ITASNDSTLK 255
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDNSVRVFKT 171
+ DL ++ L+ + GH+ CV +S + SGG D V V+KT
Sbjct: 256 ILDLLEGRL-LYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT 301
Score = 110 (43.8 bits), Expect = 0.00027, P = 0.00027
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 49 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
+GH++AI++V ++ ++ + S D LKIW + M+ +V HK+ V V++
Sbjct: 17 RGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMK-PQMRAYCLV-----GHKDAVMCVQF 70
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSV 166
SP L S S D +V LW + S K H V V++S D + +++ D ++
Sbjct: 71 SP-SGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTI 128
Query: 167 RVFKTKHQPK 176
+V+ T H+ K
Sbjct: 129 KVW-TVHRQK 137
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 151 (58.2 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 47 TLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L GH + +V W ++ S D+ +K+WDA K G ++S F HK VQ V
Sbjct: 86 SLTGHGWDVKSVDWHPTKSLLVSGGKDYLVKLWDA-----KSGRELRS-FHGHKNIVQCV 139
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQD 163
+W+ + ++AS D +KL+D+RS K L GH V + W + Y +SG D
Sbjct: 140 KWNQ-NGNWVLTASKDQIIKLYDIRSMK-ELESFRGHNKDVTALAWHPFHEEYFVSGSYD 197
Query: 164 NSVRVFKTKHQ 174
++ + H+
Sbjct: 198 GAIFHWLVGHE 208
Score = 146 (56.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 37/134 (27%), Positives = 69/134 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L + GHK + V+W ++T+S D +K++D + MK+ +F H + V
Sbjct: 126 LRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYD--IRSMKE----LESFRGHNKDVT 179
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLG-HEDKVMCVNWSDYRYIM-SGG 161
++ W P + FVS S+D ++ W L + P ++ H++ V + W Y++ SGG
Sbjct: 180 ALAWHPFHEEYFVSGSYDGAIFHW-LVGHETPQIEINNAHDNSVWDLAWHPVGYLLCSGG 238
Query: 162 QDNSVRVFKTKHQP 175
D++ R F +++P
Sbjct: 239 NDHATR-FWCRNRP 251
Score = 114 (45.2 bits), Expect = 0.00019, P = 0.00019
Identities = 33/127 (25%), Positives = 64/127 (50%)
Query: 48 LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
L+ H +A+ ++ W+ + ++T +K W + + +K V T +H+E V+ +
Sbjct: 3 LQAHDQAVRSMIWSNNENWMVTGDDGGAIKYWQSNMNNVK----VNKT--AHRESVRDLS 56
Query: 107 WSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQDNS 165
+ D + F S S D +VK+WD + + GH V V+W + ++ SGG+D
Sbjct: 57 FCRTDLK-FCSCSDDTTVKVWDFARCQEER-SLTGHGWDVKSVDWHPTKSLLVSGGKDYL 114
Query: 166 VRVFKTK 172
V+++ K
Sbjct: 115 VKLWDAK 121
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 199
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 200 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 257
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 258 TVRVWDVRPFAPK 270
Score = 144 (55.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 157
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 215
Query: 165 SVRVF 169
++V+
Sbjct: 216 DIKVW 220
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 200
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 201 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 259 TVRVWDVRPFAPK 271
Score = 144 (55.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 158
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 165 SVRVF 169
++V+
Sbjct: 217 DIKVW 221
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 200
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 201 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 259 TVRVWDVRPFAPK 271
Score = 144 (55.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 158
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 165 SVRVF 169
++V+
Sbjct: 217 DIKVW 221
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 200
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 201 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 259 TVRVWDVRPFAPK 271
Score = 144 (55.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 158
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 165 SVRVF 169
++V+
Sbjct: 217 DIKVW 221
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 148 (57.2 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 200
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 201 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 259 TVRVWDVRPFAPK 271
Score = 144 (55.7 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 158
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 165 SVRVF 169
++V+
Sbjct: 217 DIKVW 221
>DICTYBASE|DDB_G0279903 [details] [associations]
symbol:wdr12 "NLE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279903 GO:GO:0005654 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042273 GO:GO:0006364
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HAMAP:MF_03029
EMBL:AAFI02000034 RefSeq:XP_641483.1 ProteinModelPortal:Q54W52
STRING:Q54W52 EnsemblProtists:DDB0233985 GeneID:8622282
KEGG:ddi:DDB_G0279903 OMA:DCTINLW Uniprot:Q54W52
Length = 463
Score = 150 (57.9 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 41/114 (35%), Positives = 59/114 (51%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
I+T+ D ++IWD K + SHK WV SV W+P S S D +VK
Sbjct: 344 IVTAHKDRIVRIWDPRSSDETKSQT--QSLISHKTWVTSVNWNPSSKYHCCSTSHDGTVK 401
Query: 126 LWDLRSPKVPLF--DMLGH-EDKVMCV--------NWSDYRYIMSGGQDNSVRV 168
WD+R+ K+PL+ D L +DKV+ N +DY I+SGG D+ +R+
Sbjct: 402 YWDIRT-KIPLYTIDTLEKSKDKVLSSSFISNKNKNINDYS-IVSGGTDSKLRI 453
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 149 (57.5 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 34/107 (31%), Positives = 62/107 (57%)
Query: 47 TLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
T+ GH +S+V + A D ++++S D T+K+W+ + G VK T++ H+EWV+ V
Sbjct: 188 TMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWE-----VATGYCVK-TYTGHREWVRMV 241
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS 152
R I+ +F + S D ++++W L + K ++ HE V C+ W+
Sbjct: 242 RVH-IEGSIFATCSNDQTIRVW-LTNSKDCKVELRDHEHTVECIAWA 286
Score = 129 (50.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 66 IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+ + S D T++IWD +G + T S H WV+ + + P L VSAS D +++
Sbjct: 312 LASGSRDKTIRIWDVSVG------LCLLTLSGHDNWVRGLAFHPGGKYL-VSASDDKTIR 364
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWSD-YRYIMSGGQDNSVRVFKTK 172
+WDLR+ + + + H+ +++ + Y++SG D +V+V++ +
Sbjct: 365 VWDLRNKRC-MKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWECR 411
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/126 (27%), Positives = 65/126 (51%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
+L GH+ +I+ V + + ++ S S D T++IWD E G ++ + H + VQ V
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYER------SLKGHTDSVQDV 156
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ +L S S D S+KLWD + + M GH+ V V + Y++S +D
Sbjct: 157 AFDA-QGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDR 215
Query: 165 SVRVFK 170
++++++
Sbjct: 216 TIKMWE 221
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 146 (56.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + V+
Sbjct: 258 VWDVGT-RTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 146 (56.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + V+
Sbjct: 258 VWDVGT-RTCIHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 149 (57.5 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 37/138 (26%), Positives = 71/138 (51%)
Query: 44 PLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSHK 99
P + L+GH++ + W ++++S DHT+ +WD K+G +V K+ F+ H
Sbjct: 169 PDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDIS-AVPKEGKVVDAKTIFTGHT 227
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-RY 156
V+ V W + LF S + D + +WD RS P + H +V C++++ Y +
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 157 IMS-GGQDNSVRVFKTKH 173
I++ G D +V ++ ++
Sbjct: 288 ILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISAVPKEGKVVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 114 (45.2 bits), Expect = 0.00014, P = 0.00014
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P ++ H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 147 (56.8 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 44/137 (32%), Positives = 68/137 (49%)
Query: 43 TPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSS--HK 99
T L L GH+ + W D ++ T D T++IW A+ G G V T S H
Sbjct: 5 TLLQCLSGHRGRVWGAGWHPRDPVLATCGEDKTIRIW-ADDG---TGRWVPKTVLSDGHT 60
Query: 100 EWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDML-GHEDKVMCVNWSDYRYIM 158
++ V WSP + SASFD +V +WD RS + L GHE++V V+WS ++
Sbjct: 61 RTIRDVAWSPCG-RFLASASFDATVAIWDRRSGEFECNATLEGHENEVKSVSWSKSGALL 119
Query: 159 SG-GQDNSVRVFKTKHQ 174
+ +D SV +++ +
Sbjct: 120 ATCSRDKSVWIWEVAQE 136
Score = 128 (50.1 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 39/135 (28%), Positives = 71/135 (52%)
Query: 47 TLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL+GH+ + +V W+ ++ T S D ++ IW+ + A V +T H + V+ V
Sbjct: 99 TLEGHENEVKSVSWSKSGALLATCSRDKSVWIWEVAQEDEYECAAVLNT---HSQDVKKV 155
Query: 106 RWSPIDPQLFVSASFDNSVKLW--DLRSPKVPLFDMLG-HEDKVMCVNW--SDYRYIMSG 160
W P + + SAS+DN+++L+ DL FD L H+ V + + S R + S
Sbjct: 156 EWHP-NEDVLASASYDNTIQLYREDLADSDWSSFDTLASHDSTVWSIAFDASGSR-LASC 213
Query: 161 GQDNSVRVFKTKHQP 175
D +VR+++ +++P
Sbjct: 214 SDDQTVRIWQ-EYKP 227
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 153 (58.9 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 45 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
L TL HK + ++W ++T+S DH LK++D + +++ V F HK+
Sbjct: 308 LATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFD--IRNLREEVQV---FRGHKKEAS 362
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIM-SGGQ 162
SV W PI LF S D S+ W++ + K H+ V + W +I+ SG
Sbjct: 363 SVSWHPIHEGLFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSN 422
Query: 163 DNSVRVFKTKHQPKSGQKSK 182
D++++ F T+++P + K
Sbjct: 423 DHTIK-FWTRNRPGDLMRDK 441
Score = 139 (54.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 38/134 (28%), Positives = 69/134 (51%)
Query: 48 LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVR 106
L+ H ++ + W+ D ++T +K W + + +K + +HKE ++ +
Sbjct: 184 LQAHDISVRTMVWSHNDSWMVTGDHGGYVKYWQSNMNNVKM-------YQAHKEAIRGIS 236
Query: 107 WSPIDPQLFVSASFDNSVKLWD-LRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+SP D + FVS S D ++++WD +R + + + GH V CV+W + I+SG +DN
Sbjct: 237 FSPTDSK-FVSGSDDGTLRIWDFMRCQEERV--LRGHGADVKCVHWHPQKGMIVSGSKDN 293
Query: 165 SVRVFKTKHQPKSG 178
+ K PKSG
Sbjct: 294 QQPI-KI-WDPKSG 305
Score = 130 (50.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 48 LKGHKEAISAVQWTAVDEIITS-SWDHT--LKIWDAELGGMKKGAIVKSTFSSHKEWVQS 104
L+GH + V W +I S S D+ +KIWD + G I +T +HK V
Sbjct: 267 LRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSG------IALATLHAHKSTVMD 320
Query: 105 VRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR--YIMSGGQ 162
++W+ + V+AS D+ +KL+D+R+ + + GH+ + V+W SGG
Sbjct: 321 LKWND-NGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGS 379
Query: 163 DNSV 166
D S+
Sbjct: 380 DGSI 383
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 149 (57.5 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 50 GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWS 108
GHK+ +++VQ++ ++ S S D T+++W + K+G S F +H V+SV +S
Sbjct: 16 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPD----KRGKF--SEFKAHTAPVRSVDFS 69
Query: 109 PIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVR 167
D Q +AS D S+K+W + + L+ + H V C +S D R I+S +D +++
Sbjct: 70 A-DGQFLATASEDKSIKVWSMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIK 127
Query: 168 VFKTKHQ 174
++ T ++
Sbjct: 128 IWDTTNK 134
Score = 121 (47.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/129 (27%), Positives = 64/129 (49%)
Query: 49 KGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRW 107
K H + +V ++A + + T+S D ++K+W M + + S + H WV+ ++
Sbjct: 57 KAHTAPVRSVDFSADGQFLATASEDKSIKVWS-----MYRQRFLYSLYR-HTHWVRCAKF 110
Query: 108 SPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR----YIMSGGQD 163
SP D +L VS S D ++K+WD + + + D V N+ D+ I S G D
Sbjct: 111 SP-DGRLIVSCSEDKTIKIWDTTNKQC----VNNFSDSVGFANFVDFNPSGTCIASAGSD 165
Query: 164 NSVRVFKTK 172
+V+V+ +
Sbjct: 166 QTVKVWDVR 174
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 153 (58.9 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 45 LITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
+++L GH I +V + A + ++ + + T+K+WD E + IV+ T + H+
Sbjct: 52 ILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLE-----EAKIVR-TLTGHRSNCI 105
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
SV + P + F S S D ++K+WD+R K + GH V + ++ D R+++SGG+
Sbjct: 106 SVDFHPFG-EFFASGSLDTNLKIWDIRK-KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGE 163
Query: 163 DNSVRVF 169
DN V+V+
Sbjct: 164 DNIVKVW 170
Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/131 (31%), Positives = 69/131 (52%)
Query: 40 LQKTPLI-TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSS 97
L++ ++ TL GH+ +V + E S S D LKIWD KKG I T+
Sbjct: 88 LEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIR----KKGCI--HTYKG 141
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYI 157
H V +R++P D + VS DN VK+WDL + K+ L + HE ++ +++ + ++
Sbjct: 142 HTRGVNVLRFTP-DGRWVVSGGEDNIVKVWDLTAGKL-LTEFKSHEGQIQSLDFHPHEFL 199
Query: 158 MS-GGQDNSVR 167
++ G D +V+
Sbjct: 200 LATGSADRTVK 210
Score = 118 (46.6 bits), Expect = 0.00011, P = 0.00011
Identities = 36/134 (26%), Positives = 70/134 (52%)
Query: 39 ILQKTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKKGAIVKSTFSS 97
I +K + T KGH ++ +++T +++ D+ +K+WD G + + F S
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLL------TEFKS 183
Query: 98 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK-VMCVNWS-DYR 155
H+ +QS+ + P + L + S D +VK WDL + L G E V C++++ D +
Sbjct: 184 HEGQIQSLDFHPHE-FLLATGSADRTVKFWDLET--FELIGSGGPETAGVRCLSFNPDGK 240
Query: 156 YIMSGGQDNSVRVF 169
++ G Q+ S+++F
Sbjct: 241 TVLCGLQE-SLKIF 253
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 147 (56.8 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 43/133 (32%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK A+ TF + + V +V
Sbjct: 148 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAV--QTFQNTYQ-VLAV 200
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 201 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 258
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 259 TVRVWDVRPFAPK 271
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 158
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 159 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDN 216
Query: 165 SVRVF 169
++V+
Sbjct: 217 DIKVW 221
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 148 (57.2 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 44/133 (33%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK AI TF + + V +V
Sbjct: 147 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAI--QTFQNTYQ-VLAV 199
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 200 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 257
Query: 165 SVRVFKTK-HQPK 176
+VRV+ + PK
Sbjct: 258 TVRVWDVRPFAPK 270
Score = 144 (55.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 157
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 158 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDN 215
Query: 165 SVRVF 169
++V+
Sbjct: 216 DIKVW 220
>MGI|MGI:1926135 [details] [associations]
symbol:Coro7 "coronin 7" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1926135 GO:GO:0016021 GO:GO:0005829
GO:GO:0005794 GO:GO:0000139 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016023 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08954 CTD:79585
HOGENOM:HOG000006535 HOVERGEN:HBG051080 OrthoDB:EOG49S65R
OMA:EVEFARC EMBL:AK018739 EMBL:AK040408 EMBL:AK150051 EMBL:BC061006
IPI:IPI00135390 RefSeq:NP_084481.3 UniGene:Mm.325512
ProteinModelPortal:Q9D2V7 SMR:Q9D2V7 STRING:Q9D2V7
PhosphoSite:Q9D2V7 PaxDb:Q9D2V7 PRIDE:Q9D2V7
Ensembl:ENSMUST00000038552 GeneID:78885 KEGG:mmu:78885
UCSC:uc007xzy.1 InParanoid:Q9D2V7 ChiTaRS:CORO7 NextBio:349664
Bgee:Q9D2V7 CleanEx:MM_CORO7 Genevestigator:Q9D2V7
GermOnline:ENSMUSG00000039637 Uniprot:Q9D2V7
Length = 922
Score = 153 (58.9 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 37/140 (26%), Positives = 73/140 (52%)
Query: 40 LQKTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKKGAIVKST-FS 96
L T L TL+ + A+ + W D + + D +++W GG++ T +
Sbjct: 530 LPDTALPTLQ-NGTAVMDLVWDPFDPHRLAVAGEDARIRLWRVPPGGLENVLTTPETVLT 588
Query: 97 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYR 155
H E + S+R+ P+ + S+S+D +V++WDL++ L + GH+D++ + WS D +
Sbjct: 589 GHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAERL-KLQGHQDQIFSLAWSPDGK 647
Query: 156 YIMSGGQDNSVRVFKTKHQP 175
+ + +D VRV++ + P
Sbjct: 648 QLATVCKDGHVRVYEPRSSP 667
Score = 121 (47.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 33/103 (32%), Positives = 56/103 (54%)
Query: 43 TPLITLKGHKEAISAVQW--TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
TP L GH E I ++++ A D + +SS+D T++IWD + G + +K H++
Sbjct: 582 TPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQTGAER----LK--LQGHQD 635
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHE 143
+ S+ WSP QL + D V++++ RS +PL + G E
Sbjct: 636 QIFSLAWSPDGKQL-ATVCKDGHVRVYEPRSSPLPLQEGPGPE 677
Score = 113 (44.8 bits), Expect = 0.00052, P = 0.00052
Identities = 31/142 (21%), Positives = 70/142 (49%)
Query: 46 ITLKG-HKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
+T G H + ++ + ++ D+ + +S D T+K+W G ++ + V
Sbjct: 70 VTYLGCHSDLVTDLDFSPFDDFLLASGSADRTIKLWRLSGTGEALPSVPGVVLGPEELPV 129
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGG 161
+ +++ P + VS + +VK+WD+ + PL ++ H+D V WS D + +
Sbjct: 130 EVLQFHPTVDGVLVSTA-GKTVKVWDVAKQQ-PLTELEAHKDLVQSAVWSRDGAIVGTAC 187
Query: 162 QDNSVRVFKTKHQPKSGQKSKA 183
+D +R+F + + ++ Q ++A
Sbjct: 188 KDKQLRIFDPRARTQASQSTQA 209
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 145 (56.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 47/165 (28%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + V+
Sbjct: 258 VWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHVY 301
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 149 (57.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/127 (30%), Positives = 70/127 (55%)
Query: 45 LITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
++ L GH + I +V+W E+IT S D+++K+WD M++ T +H V
Sbjct: 373 IMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLR---MRRNTY---TMPAHTSVVT 426
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQ 162
VR + Q VSASFD ++K+W + PL + GH+ +++CV+ S D +++ S
Sbjct: 427 RVR-ADAAGQYLVSASFDCTLKMWSTTGWQ-PLRQLQGHDTRILCVDISPDGQWMCSSAF 484
Query: 163 DNSVRVF 169
D + +++
Sbjct: 485 DRTFKLW 491
Score = 110 (43.8 bits), Expect = 0.00056, P = 0.00056
Identities = 34/133 (25%), Positives = 66/133 (49%)
Query: 42 KTPLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
K L+ +GH ++++ V + + +T D ++WD M+ G + H +
Sbjct: 328 KKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWD-----MRTGRCIMF-LDGHTK 381
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDY--RYIM 158
+ SV W P ++ ++ S DNS+K+WDLR + + M H V V +D +Y++
Sbjct: 382 EIHSVEWMPNGYEM-ITGSSDNSMKVWDLRMRR-NTYTMPAHTSVVTRVR-ADAAGQYLV 438
Query: 159 SGGQDNSVRVFKT 171
S D +++++ T
Sbjct: 439 SASFDCTLKMWST 451
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 144 (55.7 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 130 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 186
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 187 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 239
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + ++
Sbjct: 240 VWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 283
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/139 (28%), Positives = 72/139 (51%)
Query: 43 TPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIV--KSTFSSH 98
TP + L+GH++ + W ++++S DHT+ +WD K+G IV K+ F+ H
Sbjct: 168 TPDLRLRGHQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVP-KEGKIVDAKTIFTGH 226
Query: 99 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKV--PLFDMLGHEDKVMCVNWSDY-R 155
V+ V W + LF S + D + +WD RS P + H +V C++++ Y
Sbjct: 227 TAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSE 286
Query: 156 YIMS-GGQDNSVRVFKTKH 173
+I++ G D +V ++ ++
Sbjct: 287 FILATGSADKTVALWDLRN 305
Score = 144 (55.7 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 28 EVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGM 85
+++++P +++ KT + T GH + V W + E + S D L IWD
Sbjct: 206 DISTVPKEGKIVDAKT-IFT--GHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNT 262
Query: 86 KKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDK 145
K + +H V + ++P + + S D +V LWDLR+ K+ L H+D+
Sbjct: 263 SKPS---HAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDE 319
Query: 146 VMCVNWSDYR--YIMSGGQDNSVRVF 169
+ V WS + + S G D + V+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVW 345
Score = 113 (44.8 bits), Expect = 0.00020, P = 0.00020
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 44 PLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEW 101
P + H ++ + + E I T S D T+ +WD L +K + +F SHK+
Sbjct: 265 PSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD--LRNLK---LKLHSFESHKDE 319
Query: 102 VQSVRWSPIDPQLFVSASFDNSVKLWDL------RSPK-----VP--LFDMLGHEDKVMC 148
+ V+WSP + + S+ D + +WDL +SP+ P LF GH K+
Sbjct: 320 IFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISD 379
Query: 149 VNWSDYR--YIMSGGQDNSVRVFK 170
+W+ I S +DN ++V++
Sbjct: 380 FSWNPNEPWVICSVSEDNIMQVWQ 403
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/128 (31%), Positives = 68/128 (53%)
Query: 45 LITLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQ 103
++TL GH I ++ + T+ D IIT S+DHT+ +WDA G +K T H +
Sbjct: 212 VVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTG--RK----VHTLIGHCAEIS 265
Query: 104 SVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVM--CVNWSDYRYIMSGG 161
S +S D L ++ S D + LWD S K + + GH+D+++ C +++ + I +
Sbjct: 266 SALFS-WDCSLILTGSMDKTCMLWDATSGKC-VATLTGHDDEILDSCFDYTG-KLIATAS 322
Query: 162 QDNSVRVF 169
D + RV+
Sbjct: 323 ADGTARVY 330
Score = 125 (49.1 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 45 LITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L TL+GH+ + A+ + D+I T S+D T K+W AE G TF H +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYH------TFRGHTAEI 180
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNW--SDYRYIMSG 160
+ ++P + + S D + KLWD++S + + + GH +++ +++ S R I++G
Sbjct: 181 VCLSFNP-QSTVVATGSMDTTAKLWDIQSGE-EVVTLTGHLAEIISLSFDTSGDR-IITG 237
Query: 161 GQDNSVRVF 169
D++V V+
Sbjct: 238 SFDHTVVVW 246
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + ++
Sbjct: 258 VWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 46/165 (27%), Positives = 82/165 (49%)
Query: 7 GILTLGVIFMTVGALLTLTNIEVTSLPSFFQLILQKTPLITLKGHKEAISAVQWTAVDEI 66
G L + + G L I+ + + F + K L TL+GH I ++ ++ ++
Sbjct: 148 GKFILSIAYSPDGKYLASGAID--GIINIFDIATGKL-LHTLEGHAMPIRSLTFSPDSQL 204
Query: 67 -ITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 125
+T+S D +KI+D + A + T S H WV +V + P D FVS+S D SVK
Sbjct: 205 LVTASDDGYIKIYDVQ------HANLAGTLSGHASWVLNVAFCPDDTH-FVSSSSDKSVK 257
Query: 126 LWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDNSVRVF 169
+WD+ + + + H+D+V V ++ + I+S G D + ++
Sbjct: 258 VWDVGT-RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 301
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 146 (56.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 42/133 (31%), Positives = 69/133 (51%)
Query: 48 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
LKGH +++ + T S D T+K+WD KK A+ TF + + V +V
Sbjct: 174 LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIR----KKAAV--QTFQNTYQ-VLAV 226
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWS-DYRYIMSGGQDN 164
++ Q+ +S DN +K+WDLR K+ + M GH D V ++ S + Y++S DN
Sbjct: 227 TFNDTSDQI-ISGGIDNDIKVWDLRQNKLT-YTMRGHADSVTGLSLSSEGSYLLSNAMDN 284
Query: 165 SVRVFKTK-HQPK 176
+VR++ + PK
Sbjct: 285 TVRIWDVRPFAPK 297
Score = 143 (55.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 40/125 (32%), Positives = 63/125 (50%)
Query: 47 TLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TLKGH A+ + + T + ++S D T+ +WD+E G K H +V S
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK------RLKGHTSFVNSC 184
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYR-YIMSGGQDN 164
+ PQL + S D +VKLWD+R K + +V+ V ++D I+SGG DN
Sbjct: 185 YPARRGPQLVCTGSDDGTVKLWDIR--KKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDN 242
Query: 165 SVRVF 169
++V+
Sbjct: 243 DIKVW 247
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 153 (58.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
Q + LKGHKEAI + ++++ S+D T+K+W+ G +K F+ H+
Sbjct: 1035 QLNECVFLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD------FACHRG 1088
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSG 160
V S SP D F S S D + K+W S V L ++ GHE V C +S +++
Sbjct: 1089 AVLSCAVSP-DGSRFSSTSADKTAKIWSFESSSV-LHELKGHEACVRCSAFSPSNKLLAT 1146
Query: 161 GQDNS-VRVF 169
G D +R++
Sbjct: 1147 GDDKGDIRIW 1156
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 153 (58.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
Q + LKGHKEAI + ++++ S+D T+K+W+ G +K F+ H+
Sbjct: 1036 QLNECVFLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD------FACHRG 1089
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSG 160
V S SP D F S S D + K+W S V L ++ GHE V C +S +++
Sbjct: 1090 AVLSCAVSP-DGSRFSSTSADKTAKIWSFESSSV-LHELKGHEACVRCSAFSPSNKLLAT 1147
Query: 161 GQDNS-VRVF 169
G D +R++
Sbjct: 1148 GDDKGDIRIW 1157
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 153 (58.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 41 QKTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKE 100
Q + LKGHKEAI + ++++ S+D T+K+W+ G +K F+ H+
Sbjct: 1039 QLNECVFLKGHKEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKD------FACHRG 1092
Query: 101 WVQSVRWSPIDPQLFVSASFDNSVKLWDLRSPKVPLFDMLGHEDKVMCVNWSDYRYIMSG 160
V S SP D F S S D + K+W S V L ++ GHE V C +S +++
Sbjct: 1093 AVLSCAVSP-DGSRFSSTSADKTAKIWSFESSSV-LHELKGHEACVRCSAFSPSNKLLAT 1150
Query: 161 GQDNS-VRVF 169
G D +R++
Sbjct: 1151 GDDKGDIRIW 1160
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 148 (57.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 38/142 (26%), Positives = 76/142 (53%)
Query: 47 TLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWVQSV 105
TL GHK I+ +Q+ D ++ S S D+T+++WD E G + H+E V+ +
Sbjct: 383 TLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLR------VLEGHEELVRCI 434
Query: 106 RWSPIDPQLFVSASFDNSVKLWDLRS---PKVP-----LFDMLGHEDKVMCVNWSDYRYI 157
R+ D + VS ++D +K+WDL++ P+ P L ++ H +V + + +++ I
Sbjct: 435 RF---DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQ-I 490
Query: 158 MSGGQDNSVRVFKTKHQPKSGQ 179
+S D+++ ++ + +GQ
Sbjct: 491 ISSSHDDTILIWDFLNVSSNGQ 512
Score = 130 (50.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/131 (32%), Positives = 67/131 (51%)
Query: 45 LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKKGAIVKSTFSSHKEWV 102
L L GH ++ +Q+ DE I+T S D T+++WD G V +T H E V
Sbjct: 258 LKVLTGHTGSVLCLQY---DERVIVTGSSDSTVRVWDVSSGE------VLNTLIHHNEAV 308
Query: 103 QSVRWSPIDPQLFVSASFDNSVKLWDLRSPK-VPLFDML-GHEDKVMCVNWSDYRYIMSG 160
+R+ L V+ S D S+ +WD+ S + L +L GH V V++ D +YI+S
Sbjct: 309 LHLRFCN---GLMVTCSKDRSIAVWDMASATDISLRRVLVGHRAAVNVVDFDD-KYIVSA 364
Query: 161 GQDNSVRVFKT 171
D +++V+ T
Sbjct: 365 SGDRTIKVWST 375
WARNING: HSPs involving 731 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 183 183 0.00076 110 3 11 22 0.43 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 981
No. of states in DFA: 614 (65 KB)
Total size of DFA: 182 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.93u 0.09s 18.02t Elapsed: 00:00:02
Total cpu time: 18.01u 0.10s 18.11t Elapsed: 00:00:02
Start: Thu Aug 15 16:25:12 2013 End: Thu Aug 15 16:25:14 2013
WARNINGS ISSUED: 2