RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2114
         (147 letters)



>d2ozua1 d.108.1.1 (A:507-776) Histone acetyltransferase MYST3
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 270

 Score =  111 bits (279), Expect = 1e-31
 Identities = 47/63 (74%), Positives = 51/63 (80%)

Query: 31  RKDKISVWEVDGKRFKPYCQNLCLLAKFFLDHKTLYDDVEPFLFYVMTICDSEGCHTVGY 90
           RK+ ISV+EVDG     YCQNLCLLAK FLDHKTLY DVEPFLFYV+T  D +GCH VGY
Sbjct: 66  RKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGY 125

Query: 91  FSK 93
           FSK
Sbjct: 126 FSK 128


>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
           MYST1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 271

 Score =  111 bits (278), Expect = 2e-31
 Identities = 46/63 (73%), Positives = 50/63 (79%)

Query: 31  RKDKISVWEVDGKRFKPYCQNLCLLAKFFLDHKTLYDDVEPFLFYVMTICDSEGCHTVGY 90
           RK  ISV EVDGK  K YCQNLCLLAK FLDHKTLY DVEPF+FY++T  D +G H VGY
Sbjct: 66  RKSNISVHEVDGKDHKIYCQNLCLLAKLFLDHKTLYFDVEPFVFYILTEVDRQGAHIVGY 125

Query: 91  FSK 93
           FSK
Sbjct: 126 FSK 128


>d1fy7a_ d.108.1.1 (A:) Histone acetyltransferase ESA1 {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 273

 Score =  110 bits (276), Expect = 4e-31
 Identities = 39/63 (61%), Positives = 49/63 (77%)

Query: 31  RKDKISVWEVDGKRFKPYCQNLCLLAKFFLDHKTLYDDVEPFLFYVMTICDSEGCHTVGY 90
           R D +S +E+DG++ + +C+NLCLL+K FLDHKTLY DV+PFLFY MT  D  G H VGY
Sbjct: 69  RDDYVSFFEIDGRKQRTWCRNLCLLSKLFLDHKTLYYDVDPFLFYCMTRRDELGHHLVGY 128

Query: 91  FSK 93
           FSK
Sbjct: 129 FSK 131


>d1boba_ d.108.1.1 (A:) Histone acetyltransferase HAT1 {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 315

 Score = 59.8 bits (145), Expect = 4e-12
 Identities = 7/74 (9%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 29  SSRKDKISVWEVDGK--RFKPYCQNLCLLAKFFLDHKTLYDDVEPFLFYVMTICDSEGCH 86
           S   ++  V++        +   + + + +  F++     D+ +P  + +  + + +   
Sbjct: 123 SLNGEEFVVYKSSLVDDFARRMHRRVQIFSLLFIEAANYIDETDPS-WQIYWLLNKKTKE 181

Query: 87  TVGYFSKLHYAKFM 100
            +G+ +   Y  ++
Sbjct: 182 LIGFVTTYKYWHYL 195


>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP)
           {Escherichia coli [TaxId: 562]}
          Length = 796

 Score = 27.7 bits (61), Expect = 0.65
 Identities = 14/113 (12%), Positives = 27/113 (23%), Gaps = 14/113 (12%)

Query: 25  FSILSSRKDKISVWEVDGKRFKPYCQNLCLLAKFFLDH-KTLYDDVEPFLFYV------- 76
            +++    ++  V  V       + Q +  +   F    +  +   E     +       
Sbjct: 345 HTLMPEALERWDVKLVK-GLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAKLAVVHDKQ 403

Query: 77  --MTICDSEGCHTVGYFSKLH--YAKFMTWFGLKTPTSRFKIHRANHATAALR 125
             M      G   V   + LH         F         K H   +     R
Sbjct: 404 VHMANLCVVGGFAVNGVAALHSDLVV-KDLFPEYHQLWPNKFHNVTNGITPRR 455


>d1wgda_ d.15.1.1 (A:) Homocysteine-responsive endoplasmic
          reticulum-resident ubiquitin-like domain member 1
          protein, HERPUD1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 93

 Score = 23.7 bits (51), Expect = 7.0
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 32 KDKISVWEVDGKRFKPYCQNLCLLAKFFLDHKTLYD 67
          K  +S   V  +R +P  Q L    K  LDH+ L D
Sbjct: 36 KAHLS--RVYPERPRPEDQRLIYSGKLLLDHQCLRD 69


>d1lnla2 b.112.1.1 (A:305-405) C-terminal domain of mollusc
           hemocyanin {Mollusca (Rapana thomasiana) [TaxId: 29165]}
          Length = 101

 Score = 23.0 bits (50), Expect = 9.1
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 1/25 (4%)

Query: 79  ICDSEG-CHTVGYFSKLHYAKFMTW 102
           IC  +G C   GYF  L  +    W
Sbjct: 23  ICAIDGECTHAGYFDVLGGSLETPW 47


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.140    0.451 

Gapped
Lambda     K      H
   0.267   0.0636    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 538,470
Number of extensions: 23065
Number of successful extensions: 52
Number of sequences better than 10.0: 1
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 12
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 49 (22.9 bits)