Query psy2115
Match_columns 77
No_of_seqs 108 out of 410
Neff 4.6
Searched_HMMs 13730
Date Sat Aug 17 00:38:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2115.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2115hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1obba1 c.2.1.5 (A:2-172) Alph 39.2 6 0.00043 24.5 1.5 15 11-25 144-158 (171)
2 d1s6ya1 c.2.1.5 (A:4-172) 6-ph 37.9 6.5 0.00047 24.2 1.5 14 12-25 140-153 (169)
3 d1up7a1 c.2.1.5 (A:1-162) 6-ph 37.6 6.7 0.00048 24.0 1.5 15 11-25 132-146 (162)
4 d1u8xx1 c.2.1.5 (X:3-169) Malt 29.3 11 0.00079 23.5 1.5 14 12-25 140-153 (167)
5 d3c0na2 f.8.1.1 (A:85-468) (Pr 22.9 20 0.0015 25.7 2.2 31 37-68 221-254 (384)
6 d1hynp_ d.112.1.2 (P:) Erythro 21.2 19 0.0014 24.8 1.7 16 53-69 35-50 (293)
7 d1dpea_ c.94.1.1 (A:) Dipeptid 20.9 26 0.0019 23.3 2.3 33 33-65 180-213 (507)
8 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 16.7 13 0.00092 22.9 -0.2 19 6-24 37-55 (121)
9 d1a5za1 c.2.1.5 (A:22-163) Lac 16.4 29 0.0021 20.4 1.5 13 13-25 111-123 (140)
10 d2cqma1 d.188.1.1 (A:28-136) P 15.9 34 0.0025 20.2 1.7 18 59-76 89-106 (109)
No 1
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}
Probab=39.16 E-value=6 Score=24.53 Aligned_cols=15 Identities=13% Similarity=0.025 Sum_probs=12.2
Q ss_pred EEEEEeccChhhhhC
Q psy2115 11 RGHKFNWTNPEDIRN 25 (77)
Q Consensus 11 ~~y~FNvTNpeevl~ 25 (77)
+-++.|+|||.+++.
T Consensus 144 ~a~~i~~TNPvdv~t 158 (171)
T d1obba1 144 KAWYLQAANPIFEGT 158 (171)
T ss_dssp TCEEEECSSCHHHHH
T ss_pred CeEEEEECChHHHHH
Confidence 347899999999864
No 2
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=37.95 E-value=6.5 Score=24.24 Aligned_cols=14 Identities=29% Similarity=0.501 Sum_probs=11.8
Q ss_pred EEEEeccChhhhhC
Q psy2115 12 GHKFNWTNPEDIRN 25 (77)
Q Consensus 12 ~y~FNvTNpeevl~ 25 (77)
=+++|+|||.+++.
T Consensus 140 a~~i~vtNPvdv~t 153 (169)
T d1s6ya1 140 AWLINFTNPAGMVT 153 (169)
T ss_dssp CEEEECSSSHHHHH
T ss_pred eEEEEeCChHHHHH
Confidence 37899999999874
No 3
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
Probab=37.63 E-value=6.7 Score=23.97 Aligned_cols=15 Identities=27% Similarity=0.357 Sum_probs=12.2
Q ss_pred EEEEEeccChhhhhC
Q psy2115 11 RGHKFNWTNPEDIRN 25 (77)
Q Consensus 11 ~~y~FNvTNpeevl~ 25 (77)
+=++.|+|||.+++.
T Consensus 132 ~a~~i~vtNPvdiit 146 (162)
T d1up7a1 132 NATIVNFTNPSGHIT 146 (162)
T ss_dssp CCEEEECSSSHHHHH
T ss_pred CeEEEEeCCHHHHHH
Confidence 447889999999874
No 4
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=29.28 E-value=11 Score=23.46 Aligned_cols=14 Identities=29% Similarity=0.536 Sum_probs=11.6
Q ss_pred EEEEeccChhhhhC
Q psy2115 12 GHKFNWTNPEDIRN 25 (77)
Q Consensus 12 ~y~FNvTNpeevl~ 25 (77)
-++.|+|||.+++.
T Consensus 140 A~li~~TNPvdv~t 153 (167)
T d1u8xx1 140 AWMLNYSNPAAIVA 153 (167)
T ss_dssp CEEEECCSCHHHHH
T ss_pred eEEEEeCCHHHHHH
Confidence 36899999999864
No 5
>d3c0na2 f.8.1.1 (A:85-468) (Pro)aerolysin, pore-forming lobe {Aeromonas hydrophila [TaxId: 644]}
Probab=22.92 E-value=20 Score=25.73 Aligned_cols=31 Identities=32% Similarity=0.583 Sum_probs=23.5
Q ss_pred CeEEEEeeeeeceEEcCCcccCCCCeee---cccc
Q psy2115 37 PYRFHYGDKYKSQKTSGPQKWSGGPHVA---RRPL 68 (77)
Q Consensus 37 PYvY~E~~~K~nvtf~~~~~~~~~~~~~---~~~~ 68 (77)
||+|+. ...-+|+|.+==.|+||+|.. +||=
T Consensus 221 PYt~t~-~I~Ydv~~~gFLRwgGNa~~~hp~~Rpt 254 (384)
T d3c0na2 221 PYEFKA-DVSYDLTLSGFLRWGGNAWYTHPDNRPN 254 (384)
T ss_dssp EEEEEE-EEEEEEEEEEEBCTTCCCBTTCCSSCCE
T ss_pred eeEEEE-EEEEEEEEeeeEeccccccccCCCCCCc
Confidence 788853 455688888878899999887 6664
No 6
>d1hynp_ d.112.1.2 (P:) Erythrocite membrane Band 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.16 E-value=19 Score=24.76 Aligned_cols=16 Identities=19% Similarity=0.520 Sum_probs=12.5
Q ss_pred CCcccCCCCeeeccccc
Q psy2115 53 GPQKWSGGPHVARRPLV 69 (77)
Q Consensus 53 ~~~~~~~~~~~~~~~~~ 69 (77)
+..-||| ||||.+.||
T Consensus 35 e~~rW~k-PHVa~Ls~h 50 (293)
T d1hynp_ 35 ENGAWGR-PHLSHLTFW 50 (293)
T ss_dssp TTSCBCC-CBCCCBCHH
T ss_pred cCCccCC-CccccccHH
Confidence 3456998 999998874
No 7
>d1dpea_ c.94.1.1 (A:) Dipeptide-binding protein {Escherichia coli [TaxId: 562]}
Probab=20.93 E-value=26 Score=23.34 Aligned_cols=33 Identities=15% Similarity=0.410 Sum_probs=22.7
Q ss_pred EEeCCeEEEEeeeeeceEEcCCcc-cCCCCeeec
Q psy2115 33 VEMGPYRFHYGDKYKSQKTSGPQK-WSGGPHVAR 65 (77)
Q Consensus 33 ~EvGPYvY~E~~~K~nvtf~~~~~-~~~~~~~~~ 65 (77)
.=-|||...+......+++..++. |.+.|+++.
T Consensus 180 vgsGPy~l~~~~~~~~i~l~~n~~y~~~~p~~d~ 213 (507)
T d1dpea_ 180 IGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDT 213 (507)
T ss_dssp CCSSSEEEEEEETTTEEEEEECTTCSSCCCSCSE
T ss_pred eeccceEeeEeccCceEEEEecCCccCcccceeE
Confidence 357999998877666677777766 445555553
No 8
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=16.65 E-value=13 Score=22.94 Aligned_cols=19 Identities=11% Similarity=0.059 Sum_probs=15.0
Q ss_pred CcceEEEEEEeccChhhhh
Q psy2115 6 NPKKLRGHKFNWTNPEDIR 24 (77)
Q Consensus 6 ~p~~~~~y~FNvTNpeevl 24 (77)
+-.+=++.+||+||-++|.
T Consensus 37 i~p~E~V~V~N~~NG~Rf~ 55 (121)
T g1uhe.1 37 LREGMKVEIVDVNNGERFS 55 (121)
T ss_dssp CCTTCEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCeEEE
Confidence 4456689999999988763
No 9
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=16.42 E-value=29 Score=20.38 Aligned_cols=13 Identities=31% Similarity=0.268 Sum_probs=10.8
Q ss_pred EEEeccChhhhhC
Q psy2115 13 HKFNWTNPEDIRN 25 (77)
Q Consensus 13 y~FNvTNpeevl~ 25 (77)
.+.++|||.+++.
T Consensus 111 ivivvtNPvd~~t 123 (140)
T d1a5za1 111 IVIVVTNPVDVLT 123 (140)
T ss_dssp EEEECSSSHHHHH
T ss_pred EEEEeCCcHHHHH
Confidence 5788999999864
No 10
>d2cqma1 d.188.1.1 (A:28-136) Prokaryotic ribosomal protein L17 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.88 E-value=34 Score=20.16 Aligned_cols=18 Identities=17% Similarity=0.100 Sum_probs=15.1
Q ss_pred CCCeeecccccCCCCccC
Q psy2115 59 GGPHVARRPLVGNPWSRV 76 (77)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~ 76 (77)
.++..|.+-|+|||+..+
T Consensus 89 D~A~ma~iElv~~p~p~~ 106 (109)
T d2cqma1 89 DRAKMAVIEYKGNCLPPL 106 (109)
T ss_dssp SCCCEEEEEESSCCCCCC
T ss_pred CCCCeEEEEECCCCCCCC
Confidence 468899999999998754
Done!