RPS-BLAST 2.2.26 [Sep-21-2011]

Database: CDD.v3.10 
           44,354 sequences; 10,937,602 total letters

Searching..................................................done

Query= psy2116
         (102 letters)



>gnl|CDD|215056 PLN00104, PLN00104, MYST -like histone acetyltransferase;
           Provisional.
          Length = 450

 Score = 99.4 bits (248), Expect = 4e-26
 Identities = 34/61 (55%), Positives = 45/61 (73%)

Query: 42  LQMGKYEMEVWYQSPYPDDYARLPKLYLCEFCLKYMKTKTILFRHANKCVWKHPPGEEVY 101
           +++G+YE++ WY SP+P +Y    KLY CEFCLK+MK K  L RH  KC  KHPPG+E+Y
Sbjct: 173 IELGRYEIDTWYFSPFPPEYNDCSKLYFCEFCLKFMKRKEQLQRHMKKCDLKHPPGDEIY 232

Query: 102 R 102
           R
Sbjct: 233 R 233


>gnl|CDD|215642 PLN03238, PLN03238, probable histone acetyltransferase MYST;
           Provisional.
          Length = 290

 Score = 90.3 bits (224), Expect = 2e-23
 Identities = 37/81 (45%), Positives = 50/81 (61%)

Query: 22  VLFSQEAELKTLPNTRGTKYLQMGKYEMEVWYQSPYPDDYARLPKLYLCEFCLKYMKTKT 81
           VL   E E +     +  + +++GKYEM+ WY SPYP+ YA   KLY+CE+CLKYM+ K 
Sbjct: 3   VLAELEREHEETTKVKNIEMIELGKYEMDTWYYSPYPEPYASCTKLYICEYCLKYMRKKK 62

Query: 82  ILFRHANKCVWKHPPGEEVYR 102
            L RH  KC  + PPG  +Y 
Sbjct: 63  SLLRHLAKCDIRQPPGGGIYG 83


>gnl|CDD|227360 COG5027, SAS2, Histone acetyltransferase (MYST family) [Chromatin
           structure and dynamics].
          Length = 395

 Score = 79.4 bits (196), Expect = 5e-19
 Identities = 32/63 (50%), Positives = 46/63 (73%)

Query: 40  KYLQMGKYEMEVWYQSPYPDDYARLPKLYLCEFCLKYMKTKTILFRHANKCVWKHPPGEE 99
             +++G YE+E WY SPYP++++ L  +Y+CEFCLKY  ++T L RH  KC  +HPPG E
Sbjct: 131 NEIKLGNYEIEPWYFSPYPEEFSDLDIVYICEFCLKYYGSQTSLVRHRKKCSLQHPPGNE 190

Query: 100 VYR 102
           +YR
Sbjct: 191 IYR 193


>gnl|CDD|173359 PTZ00064, PTZ00064, histone acetyltransferase; Provisional.
          Length = 552

 Score = 76.6 bits (188), Expect = 7e-18
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 6/83 (7%)

Query: 20  ALVLFSQEAELKTLPNTRGTKYLQMGKYEMEVWYQSPYPDDYARLPKLYLCEFCLKYMKT 79
           A++   +   L+T+   R      +GK+ ++ WY SP PD+Y  +  L+ CE+CL +   
Sbjct: 239 AILDHEETTRLRTIGRVR------IGKFILDTWYFSPLPDEYQNVDTLHFCEYCLDFFCF 292

Query: 80  KTILFRHANKCVWKHPPGEEVYR 102
           +  L RH ++C  +HPPG E+YR
Sbjct: 293 EDELIRHLSRCQLRHPPGNEIYR 315


>gnl|CDD|178777 PLN03239, PLN03239, histone acetyltransferase; Provisional.
          Length = 351

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 29  ELKTLPNTRGTKYLQMGKYEMEVWYQSPYP----DDYARLPKLYLCEFCLKYMKTKTILF 84
           E + +   +   +L++G Y+M+ WY SP P         +  LY+CEF   +   K+ L 
Sbjct: 64  EHEEVTKVKNVAFLELGPYQMDTWYFSPLPKELFKAGGFIDVLYVCEFSFGFFARKSELL 123

Query: 85  RHANKCVWK---HPPGEEVYR 102
           R   K + K   HPPG E+YR
Sbjct: 124 RFQAKELPKERRHPPGNEIYR 144


>gnl|CDD|219619 pfam07885, Ion_trans_2, Ion channel.  This family includes the
          two membrane helix type ion channels found in bacteria.
          Length = 74

 Score = 26.8 bits (60), Expect = 0.83
 Identities = 5/25 (20%), Positives = 11/25 (44%)

Query: 1  MYACSRKPRPWSLINWFYFALVLFS 25
           Y+   +   W  ++  YF+ V  +
Sbjct: 13 YYSLEEEGWGWDFLDALYFSFVTLT 37


>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M
           transition [Transcription / Cell division and chromosome
           partitioning].
          Length = 423

 Score = 27.8 bits (61), Expect = 1.0
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)

Query: 31  KTLPNTRGTKYLQMGKYEMEVWYQSPYPDD---YARLPKLYLCEFCLKYMK 78
           K   N  G KY  +  ++ +  +++P P+    ++   K Y CE C K  K
Sbjct: 359 KKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYK 409


>gnl|CDD|215473 PLN02876, PLN02876, acyl-CoA dehydrogenase.
          Length = 822

 Score = 27.1 bits (60), Expect = 1.8
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)

Query: 4   CSRKPRPWSLINW-FYFALVLF 24
           CS   +PW   NW FY A  LF
Sbjct: 306 CSASGKPWPAANWKFYVAFSLF 327


>gnl|CDD|235955 PRK07190, PRK07190, hypothetical protein; Provisional.
          Length = 487

 Score = 26.7 bits (59), Expect = 2.5
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 5   SRKPRPWSLINWFYFALVLFSQEAELKTLPNTRGTKYLQMGKYEMEVWY---QSPYPDDY 61
           S K R +SL+++  F L +F        +P     K + +   + +  +    SPY    
Sbjct: 396 SEKTRLYSLLDYRKFTLFIFGDCEVELNVPEF--VKVIHIYPQQEQANFWTRNSPYAGQA 453


>gnl|CDD|216741 pfam01853, MOZ_SAS, MOZ/SAS family.  This region of these proteins
           has been suggested to be homologous to
           acetyltransferases.
          Length = 189

 Score = 25.7 bits (57), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query: 92  WKHPPGEEVYR 102
            +HPPG E+YR
Sbjct: 1   LRHPPGNEIYR 11


>gnl|CDD|215532 PLN02982, PLN02982, galactinol-raffinose
           galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl
           compounds.
          Length = 865

 Score = 24.8 bits (54), Expect = 9.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 38  GTKYLQMGKYEMEVWYQSPYPD 59
           GTK + MG+   + W+Q P  D
Sbjct: 542 GTKQISMGRVGDDFWFQDPNGD 563


  Database: CDD.v3.10
    Posted date:  Mar 20, 2013  7:55 AM
  Number of letters in database: 10,937,602
  Number of sequences in database:  44,354
  
Lambda     K      H
   0.325    0.139    0.481 

Gapped
Lambda     K      H
   0.267   0.0581    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 5,177,636
Number of extensions: 403700
Number of successful extensions: 446
Number of sequences better than 10.0: 1
Number of HSP's gapped: 444
Number of HSP's successfully gapped: 22
Length of query: 102
Length of database: 10,937,602
Length adjustment: 68
Effective length of query: 34
Effective length of database: 7,921,530
Effective search space: 269332020
Effective search space used: 269332020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 53 (24.5 bits)