Query psy2117
Match_columns 81
No_of_seqs 105 out of 468
Neff 6.8
Searched_HMMs 13730
Date Fri Aug 16 16:31:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2117.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2117hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pila_ d.24.1.1 (A:) Pilin Gc 50.8 6.4 0.00047 21.6 2.9 20 5-24 8-28 (158)
2 d1obba1 c.2.1.5 (A:2-172) Alph 49.2 3.5 0.00025 24.7 1.5 15 51-65 144-158 (171)
3 d1s6ya1 c.2.1.5 (A:4-172) 6-ph 48.2 3.7 0.00027 24.5 1.6 15 51-65 139-153 (169)
4 d1up7a1 c.2.1.5 (A:1-162) 6-ph 47.0 4 0.00029 24.1 1.6 15 51-65 132-146 (162)
5 d1u8xx1 c.2.1.5 (X:3-169) Malt 37.5 6.8 0.00049 23.5 1.5 14 52-65 140-153 (167)
6 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 28.0 7.6 0.00055 22.7 0.5 18 47-64 38-55 (121)
7 d1ppya_ b.52.2.1 (A:) Pyruvoyl 23.6 10 0.00075 22.0 0.5 19 46-64 38-56 (118)
8 d1a5za1 c.2.1.5 (A:22-163) Lac 19.9 23 0.0016 20.1 1.6 15 51-65 109-123 (140)
9 d1t2da1 c.2.1.5 (A:1-150) Lact 16.6 29 0.0021 20.0 1.6 15 51-65 118-132 (150)
10 d1ojua1 c.2.1.5 (A:22-163) Mal 16.5 27 0.0019 19.9 1.3 15 51-65 111-125 (142)
No 1
>d2pila_ d.24.1.1 (A:) Pilin Gc {Neisseria gonorrhoeae [TaxId: 485]}
Probab=50.82 E-value=6.4 Score=21.64 Aligned_cols=20 Identities=15% Similarity=0.473 Sum_probs=13.5
Q ss_pred HHHHHHHH-hHhccHHHHHHH
Q psy2117 5 ALLTLTNI-EVTSLPSFFQLI 24 (81)
Q Consensus 5 ~~l~~~Gi-~~~~~p~~i~~~ 24 (81)
+.++|+|| ..+.+|.+.+.+
T Consensus 8 VViaIIgILaaia~P~~~~~~ 28 (158)
T d2pila_ 8 IVIAIVGILAAVALPAYQDYT 28 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 45677788 677788665544
No 2
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}
Probab=49.18 E-value=3.5 Score=24.74 Aligned_cols=15 Identities=13% Similarity=0.182 Sum_probs=12.9
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-++.|+|||.+++.
T Consensus 144 ~a~~i~~TNPvdv~t 158 (171)
T d1obba1 144 KAWYLQAANPIFEGT 158 (171)
T ss_dssp TCEEEECSSCHHHHH
T ss_pred CeEEEEECChHHHHH
Confidence 678999999999863
No 3
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=48.17 E-value=3.7 Score=24.49 Aligned_cols=15 Identities=33% Similarity=0.709 Sum_probs=12.6
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-+++|+|||.+++.
T Consensus 139 da~~i~vtNPvdv~t 153 (169)
T d1s6ya1 139 DAWLINFTNPAGMVT 153 (169)
T ss_dssp TCEEEECSSSHHHHH
T ss_pred CeEEEEeCChHHHHH
Confidence 568999999999864
No 4
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
Probab=46.96 E-value=4 Score=24.13 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=12.5
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-++.|+|||.+++.
T Consensus 132 ~a~~i~vtNPvdiit 146 (162)
T d1up7a1 132 NATIVNFTNPSGHIT 146 (162)
T ss_dssp CCEEEECSSSHHHHH
T ss_pred CeEEEEeCCHHHHHH
Confidence 567899999999863
No 5
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=37.53 E-value=6.8 Score=23.47 Aligned_cols=14 Identities=29% Similarity=0.657 Sum_probs=11.5
Q ss_pred EEEEeecChHHhhC
Q psy2117 52 FYFFNWTNPEDIRN 65 (81)
Q Consensus 52 ~y~fN~TN~~e~l~ 65 (81)
-++.|+|||.+++.
T Consensus 140 A~li~~TNPvdv~t 153 (167)
T d1u8xx1 140 AWMLNYSNPAAIVA 153 (167)
T ss_dssp CEEEECCSCHHHHH
T ss_pred eEEEEeCCHHHHHH
Confidence 46899999999863
No 6
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=28.04 E-value=7.6 Score=22.66 Aligned_cols=18 Identities=11% Similarity=0.014 Sum_probs=14.7
Q ss_pred ceeEEEEEEeecChHHhh
Q psy2117 47 PIYLDFYFFNWTNPEDIR 64 (81)
Q Consensus 47 ~~~~~~y~fN~TN~~e~l 64 (81)
-.+=++.++|+||-++|-
T Consensus 38 ~p~E~V~V~N~~NG~Rf~ 55 (121)
T g1uhe.1 38 REGMKVEIVDVNNGERFS 55 (121)
T ss_dssp CTTCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCeEEE
Confidence 345589999999999884
No 7
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=23.62 E-value=10 Score=21.98 Aligned_cols=19 Identities=16% Similarity=0.073 Sum_probs=15.2
Q ss_pred cceeEEEEEEeecChHHhh
Q psy2117 46 VPIYLDFYFFNWTNPEDIR 64 (81)
Q Consensus 46 ~~~~~~~y~fN~TN~~e~l 64 (81)
+-.+=++.++|+||-++|.
T Consensus 38 i~~~EkV~V~Nv~NG~Rf~ 56 (118)
T d1ppya_ 38 ILENEAIDIWNVTNGKRFS 56 (118)
T ss_dssp CCTTCEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECCCCcEEE
Confidence 4455689999999999874
No 8
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=19.88 E-value=23 Score=20.10 Aligned_cols=15 Identities=33% Similarity=0.348 Sum_probs=11.6
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-.+.++|||-+.+.
T Consensus 109 ~aivivvtNPvd~~t 123 (140)
T d1a5za1 109 DSIVIVVTNPVDVLT 123 (140)
T ss_dssp TCEEEECSSSHHHHH
T ss_pred CcEEEEeCCcHHHHH
Confidence 346888999998863
No 9
>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=16.63 E-value=29 Score=19.98 Aligned_cols=15 Identities=27% Similarity=0.403 Sum_probs=11.6
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-.+.++|||-|.+.
T Consensus 118 ~aivivvtNPvD~~t 132 (150)
T d1t2da1 118 NAFIIVVTNPVDVMV 132 (150)
T ss_dssp TSEEEECSSSHHHHH
T ss_pred CeEEEEecCchHHHH
Confidence 346788999999863
No 10
>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=16.47 E-value=27 Score=19.91 Aligned_cols=15 Identities=27% Similarity=0.324 Sum_probs=11.7
Q ss_pred EEEEEeecChHHhhC
Q psy2117 51 DFYFFNWTNPEDIRN 65 (81)
Q Consensus 51 ~~y~fN~TN~~e~l~ 65 (81)
+-.+.++|||-|.+.
T Consensus 111 ~aivivvtNPvD~~t 125 (142)
T d1ojua1 111 ESKILVVTNPMDVMT 125 (142)
T ss_dssp TCEEEECSSSHHHHH
T ss_pred CcEEEEecCChHHHH
Confidence 346889999998863
Done!