Query psy2118
Match_columns 357
No_of_seqs 328 out of 2751
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 16:32:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/2118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3148|consensus 100.0 1.6E-33 3.6E-38 237.6 11.8 189 1-189 1-264 (273)
2 PTZ00285 glucosamine-6-phospha 100.0 6.9E-30 1.5E-34 235.7 16.0 134 42-175 117-250 (253)
3 KOG0163|consensus 100.0 4.6E-31 1E-35 259.8 1.9 203 59-273 340-557 (1259)
4 COG5022 Myosin heavy chain [Cy 100.0 5.3E-31 1.2E-35 276.7 1.9 192 42-244 299-514 (1463)
5 PRK02122 glucosamine-6-phospha 100.0 1.1E-28 2.5E-33 252.6 15.8 211 1-213 28-322 (652)
6 PRK12358 putative 6-phosphoglu 100.0 3.5E-28 7.6E-33 222.4 16.1 167 1-172 1-237 (239)
7 PTZ00014 myosin-A; Provisional 100.0 2.8E-30 6E-35 269.3 1.3 203 42-250 327-551 (821)
8 COG0363 NagB 6-phosphogluconol 100.0 1.4E-28 3E-33 223.3 12.2 163 1-172 1-236 (238)
9 cd01381 MYSc_type_VII Myosin m 100.0 1E-29 2.2E-34 261.6 3.7 201 42-250 229-451 (671)
10 PTZ00285 glucosamine-6-phospha 100.0 2.8E-28 6.2E-33 224.9 11.9 118 234-351 136-253 (253)
11 cd01387 MYSc_type_XV Myosin mo 100.0 9.6E-30 2.1E-34 262.1 1.8 201 42-250 230-450 (677)
12 TIGR00502 nagB glucosamine-6-p 100.0 2E-27 4.4E-32 220.0 16.2 173 1-173 1-248 (259)
13 cd01384 MYSc_type_XI Myosin mo 99.9 2.1E-29 4.6E-34 259.1 1.2 201 42-250 234-456 (674)
14 cd01385 MYSc_type_IX Myosin mo 99.9 2.8E-29 6.1E-34 259.2 1.7 202 42-250 240-466 (692)
15 cd01383 MYSc_type_VIII Myosin 99.9 2.4E-29 5.1E-34 258.9 1.0 199 42-250 234-454 (677)
16 cd01377 MYSc_type_II Myosin mo 99.9 4.9E-29 1.1E-33 257.7 2.4 198 42-249 244-463 (693)
17 cd01379 MYSc_type_III Myosin m 99.9 4.3E-29 9.3E-34 256.0 1.7 202 42-250 235-462 (653)
18 cd01378 MYSc_type_I Myosin mot 99.9 4.6E-29 9.9E-34 257.2 1.6 195 42-247 232-453 (674)
19 PRK09762 galactosamine-6-phosp 99.9 6.8E-27 1.5E-31 212.8 15.1 122 42-166 111-232 (232)
20 cd01380 MYSc_type_V Myosin mot 99.9 4.9E-29 1.1E-33 257.6 0.9 198 42-250 235-456 (691)
21 cd01382 MYSc_type_VI Myosin mo 99.9 5.4E-29 1.2E-33 258.0 1.2 202 42-250 260-486 (717)
22 KOG0164|consensus 99.9 7.2E-29 1.6E-33 243.8 1.1 228 59-303 269-515 (1001)
23 COG0363 NagB 6-phosphogluconol 99.9 6.9E-27 1.5E-31 212.2 13.0 106 233-346 131-237 (238)
24 KOG3147|consensus 99.9 1.8E-26 3.9E-31 204.1 13.9 199 122-347 40-250 (252)
25 PLN02360 probable 6-phosphoglu 99.9 3E-26 6.6E-31 212.9 13.4 118 42-172 123-261 (268)
26 PRK12358 putative 6-phosphoglu 99.9 2.9E-26 6.3E-31 209.8 12.6 118 224-346 119-238 (239)
27 TIGR01198 pgl 6-phosphoglucono 99.9 5.3E-26 1.1E-30 207.2 14.2 128 200-345 104-233 (233)
28 cd00124 MYSc Myosin motor doma 99.9 6.5E-28 1.4E-32 250.0 1.6 200 42-249 230-450 (679)
29 smart00242 MYSc Myosin. Large 99.9 1E-27 2.2E-32 248.1 0.8 199 42-249 238-457 (677)
30 TIGR00502 nagB glucosamine-6-p 99.9 8.3E-26 1.8E-30 209.3 13.3 128 224-356 131-258 (259)
31 TIGR01198 pgl 6-phosphoglucono 99.9 1.3E-25 2.9E-30 204.6 11.8 154 4-171 67-232 (233)
32 KOG3148|consensus 99.9 2E-26 4.4E-31 194.7 5.7 127 226-355 131-257 (273)
33 KOG0162|consensus 99.9 1.1E-26 2.3E-31 228.8 0.6 190 43-245 251-470 (1106)
34 cd01386 MYSc_type_XVIII Myosin 99.9 1.2E-26 2.7E-31 241.1 -0.5 201 42-250 232-483 (767)
35 PLN02360 probable 6-phosphoglu 99.9 6.2E-25 1.4E-29 204.1 10.4 108 224-347 149-263 (268)
36 KOG3147|consensus 99.9 4.8E-24 1E-28 188.7 13.5 118 42-173 123-249 (252)
37 PRK00443 nagB glucosamine-6-ph 99.9 3.6E-23 7.8E-28 192.1 15.5 173 1-173 1-248 (261)
38 PRK09762 galactosamine-6-phosp 99.9 6.5E-24 1.4E-28 193.2 10.0 103 234-339 130-232 (232)
39 PRK02122 glucosamine-6-phospha 99.9 1.1E-23 2.4E-28 215.9 12.2 117 224-346 159-275 (652)
40 PF00063 Myosin_head: Myosin h 99.9 9.7E-26 2.1E-30 235.5 -3.7 198 42-249 233-453 (689)
41 PRK00443 nagB glucosamine-6-ph 99.9 9.4E-23 2E-27 189.3 13.2 128 224-356 131-258 (261)
42 cd01400 6PGL 6PGL: 6-Phosphogl 99.9 5.7E-23 1.2E-27 185.7 11.0 147 2-163 61-218 (219)
43 cd01400 6PGL 6PGL: 6-Phosphogl 99.9 3.1E-22 6.6E-27 180.9 13.1 92 233-337 124-219 (219)
44 cd01399 GlcN6P_deaminase GlcN6 99.8 1.7E-20 3.6E-25 171.1 12.6 116 224-345 117-232 (232)
45 KOG0160|consensus 99.8 4.7E-22 1E-26 204.6 2.2 178 59-248 265-454 (862)
46 cd01399 GlcN6P_deaminase GlcN6 99.8 6.5E-20 1.4E-24 167.2 12.4 162 7-171 66-231 (232)
47 PF01182 Glucosamine_iso: Gluc 99.8 4.4E-20 9.5E-25 164.5 8.3 123 5-142 64-199 (199)
48 KOG0161|consensus 99.8 9.3E-22 2E-26 216.1 -6.6 226 59-305 345-585 (1930)
49 PF01182 Glucosamine_iso: Gluc 99.7 1.7E-18 3.6E-23 154.3 7.2 96 201-315 101-199 (199)
50 KOG4229|consensus 99.7 2.3E-19 4.9E-24 189.1 0.7 184 59-249 320-515 (1062)
51 cd00458 SugarP_isomerase Sugar 99.0 4.8E-10 1E-14 97.3 7.3 107 2-164 59-169 (169)
52 cd00458 SugarP_isomerase Sugar 98.5 9E-08 2E-12 83.1 5.0 53 283-337 117-169 (169)
53 COG2390 DeoR Transcriptional r 91.7 0.49 1.1E-05 45.2 6.7 52 281-345 265-316 (321)
54 PF04198 Sugar-bind: Putative 90.3 0.75 1.6E-05 42.5 6.3 52 281-345 202-253 (255)
55 PRK15418 transcriptional regul 88.2 1.1 2.4E-05 42.8 6.0 52 281-345 262-313 (318)
56 PF04198 Sugar-bind: Putative 80.7 3.5 7.6E-05 38.1 5.6 105 45-171 134-252 (255)
57 PRK15418 transcriptional regul 79.3 8.1 0.00017 36.9 7.7 51 109-172 263-313 (318)
58 COG2390 DeoR Transcriptional r 79.0 2.5 5.5E-05 40.4 4.1 51 108-171 265-315 (321)
59 COG0677 WecC UDP-N-acetyl-D-ma 39.1 49 0.0011 32.6 4.6 89 133-248 186-275 (436)
60 KOG0062|consensus 32.3 71 0.0015 32.6 4.7 173 127-315 198-412 (582)
61 PRK00561 ppnK inorganic polyph 29.7 1.3E+02 0.0029 27.8 5.8 69 1-73 1-72 (259)
62 cd06533 Glyco_transf_WecG_TagA 26.8 1.5E+02 0.0033 25.3 5.4 9 56-64 100-108 (171)
63 PF11210 DUF2996: Protein of u 24.7 1.7E+02 0.0038 23.6 4.8 59 191-254 7-73 (119)
64 PRK05723 flavodoxin; Provision 22.1 2.4E+02 0.0053 23.6 5.6 67 1-67 1-96 (151)
No 1
>KOG3148|consensus
Probab=100.00 E-value=1.6e-33 Score=237.59 Aligned_cols=189 Identities=72% Similarity=1.163 Sum_probs=181.5
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
||+++.++.+..++++|+|+..+|.+..|...++|++|+++
T Consensus 1 mkliile~~d~~~ewaakyv~~ri~~f~p~~dkyf~lglptgstplg~ykklie~~k~g~~sf~yvktfnmdeyvglprd 80 (273)
T KOG3148|consen 1 MKLIILENYDKVSEWAAKYVVNRINQFTPGGDKYFVLGLPTGSTPLGMYKKLIEFYKNGVLSFKYVKTFNMDEYVGLPRD 80 (273)
T ss_pred CcEEEeechhHHHHHHHHHHHHHHhhcCCCCceEEEEecCCCCCchhHHHHHHHHHhcCceEEEEEeeecchhhcCCCCC
Confidence 89999999999999999999999999888888899999876
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
+|..|+..|+..|++|+.+.|||+|||||||+|||++.++++++
T Consensus 81 h~esyhsfmwnnffkhidi~p~n~hildgna~dl~aec~~fe~kikeaggidlfvggigpdghiafnepgsslvsrtrvk 160 (273)
T KOG3148|consen 81 HPESYHSFMWNNFFKHIDINPANIHILDGNAADLQAECDAFERKIKEAGGIDLFVGGIGPDGHIAFNEPGSSLVSRTRVK 160 (273)
T ss_pred ChhHHHHHHHHhhhhhcccCcccceeecCchHHHHHHHHHHHHHHHhcCCeEEEeeccCCCCceeeCCCcchhhhhhhHH
Confidence 89999999999999999999999999999999999999999999
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.++.+++..++++|+.+..++|++++|.+..+++.||+++++++|+.|+-+|.+++.++.+..|.|+.+++|+++++++|
T Consensus 161 tla~dti~anarffdgd~tkvpt~altvgvgtvmdarevmilitgahkafalykaieegvnhmwtvsafqqh~~t~ficd 240 (273)
T KOG3148|consen 161 TLAMDTILANARFFDGDLTKVPTQALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTTFICD 240 (273)
T ss_pred HHhHHHHHhhceecCCccccCccceeEeeeeeeeecceEEEEEeccHHHHHHHHHHHhcccceeehhhHhhCCceEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred cchhhhhhccccchhhHHhhhchh
Q psy2118 166 EDATQELRVKTVNFEQLCINYANE 189 (357)
Q Consensus 166 ~~a~~~l~~~~n~feq~~in~~nE 189 (357)
+++-.++++++..|...+.|-.|+
T Consensus 241 edatlelkvktvkyfkglm~~h~~ 264 (273)
T KOG3148|consen 241 EDATLELKVKTVKYFKGLMNVHNK 264 (273)
T ss_pred CCceeEEEeeehHHHHHHHHhhcc
Confidence 999999999999998888887764
No 2
>PTZ00285 glucosamine-6-phosphate isomerase; Provisional
Probab=99.97 E-value=6.9e-30 Score=235.68 Aligned_cols=134 Identities=63% Similarity=0.994 Sum_probs=122.1
Q ss_pred HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhcc
Q psy2118 42 ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDA 121 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a 121 (357)
+|.+|++.|+++++||+++||||.|||||||||+++..+.++++.++..++...+..++.+.+.+|.+|||||++.|++|
T Consensus 117 ~~~~y~~~i~~~~~~Dl~lLG~G~DGH~AslfP~~~~~~~~~~v~~~~~t~~~~~~~~~~~~~~~p~~riTlt~~~i~~a 196 (253)
T PTZ00285 117 ECRRYEEKIRAVGGIDLFLAGIGTDGHIAFNEPGSSLDSRTRVKSLNQETIDANARFFGNDISKVPTMALTVGIRTIMEA 196 (253)
T ss_pred HHHHHHHHHHHhCCCcEEEeCCCCCCceeecCCCCccCCceEEEECCHHHHHHHhhhccCCcCCCCCccEEcCHHHHHhC
Confidence 78899999999999999999999999999999999887788888888888888777777777888899999999999999
Q ss_pred ceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhhhcc
Q psy2118 122 QEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVK 175 (357)
Q Consensus 122 ~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l~~~ 175 (357)
++++++++|++|+++|++++++..+..+|++.++.|++++|++|+.++..+.++
T Consensus 197 ~~i~l~~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~~~ 250 (253)
T PTZ00285 197 REVLLLATGASKAIAVARCVEGGVTHMCPASALQMHPAAVLCLDEDATLELKVK 250 (253)
T ss_pred CEEEEEecCHHHHHHHHHHhcCCCCCccchHHhccCCCEEEEEcHHHHhhhhhc
Confidence 999999999999999999998766568999999999999999999998876544
No 3
>KOG0163|consensus
Probab=99.96 E-value=4.6e-31 Score=259.84 Aligned_cols=203 Identities=27% Similarity=0.375 Sum_probs=164.6
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccc-----eEEEeeC----
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQ-----EVMILIT---- 129 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~-----~i~~~~~---- 129 (357)
+++||+|+|||+|.+.+++....|.|...++..+...+.+||+++.++ ++.|..+.+...+ +++-+.-
T Consensus 340 ~vA~vLHLGNieFEE~~ddsrGGC~v~n~seqsL~~~a~LLGld~~el---r~~L~aRvMqtt~GG~kGTvIrVPLK~~e 416 (1259)
T KOG0163|consen 340 TVAAVLHLGNIEFEEIPDDSRGGCQVSNGSEQSLTIAAELLGLDQTEL---RTGLCARVMQTTKGGFKGTVIRVPLKIHE 416 (1259)
T ss_pred HHHHHHHccccchhcccCcCCCceecccCchhhHHHHHHHhCCCHHHH---HHHHHHHHHHhccCCccceEEEeeccHHh
Confidence 789999999999999887777889999999999999999999998877 7777655554433 2333332
Q ss_pred CchhHHHHHHHHhcCCcccceecccccc------cceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhh
Q psy2118 130 GSHKAFALYKAVEEGVNHMWTVSAFQMH------PCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYE 203 (357)
Q Consensus 130 G~~Kadal~k~l~~~~~~~~pv~~l~~~------~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e 203 (357)
...-||+|+|++|+.+ |+|.|.+||+. ...|++||..|++. |..||||||||||||||||+|||+++++.|
T Consensus 417 A~n~RDALaKaiYSkL-FD~lV~~iNqsiPFe~St~fiGVLDiAGFEy--f~~NSFEQFCINyCNEKLQ~FFNerILkeE 493 (1259)
T KOG0163|consen 417 ASNARDALAKAIYSKL-FDWLVGRINQSIPFEKSTFFIGVLDIAGFEY--FAVNSFEQFCINYCNEKLQKFFNERILKEE 493 (1259)
T ss_pred hcchHHHHHHHHHHHH-HHHHHHHhhcccccccccceeEEEeecccee--eecccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2234899999999999 99999999973 56899999977553 688999999999999999999999999999
Q ss_pred HHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccC
Q psy2118 204 QEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFD 273 (357)
Q Consensus 204 ~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~ 273 (357)
|+.|++||+.+..|+|.||+.|++|+|.+..||++--.--.-+|-+++ .+++..-++.+.+.|.
T Consensus 494 QElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLDEEaklP~~s~------qhFT~~vHe~~k~HfR 557 (1259)
T KOG0163|consen 494 QELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLDEEAKLPKPSY------QHFTARVHESNKNHFR 557 (1259)
T ss_pred HHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhhhhccCCCcch------HHHHHHHHHhhhccee
Confidence 999999999999999999999999999999999984444455565442 1233333455555554
No 4
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=99.96 E-value=5.3e-31 Score=276.70 Aligned_cols=192 Identities=29% Similarity=0.455 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHhC--CeeE--------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GIHL--------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~Dl--------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
..++|...+.++- |||= +|+||+|.|||.|....+. ... ..+...+..++.+||+|+... ...+
T Consensus 299 D~kefk~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~g---~a~--~~~~~~~~~~c~LLgId~~~f-~k~l 372 (1463)
T COG5022 299 DAKEFKITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRNG---AAI--FSDNSVLDKACYLLGIDPSLF-VKWL 372 (1463)
T ss_pred cHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeecccc---hhh--cCCchHHHHHHHHhCCCHHHH-HHHH
Confidence 4577887776653 2222 8999999999999763221 111 224456677889999988776 4444
Q ss_pred ecchhhhhccceEEEeeCCchh----HHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITGSHK----AFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~~K----adal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
+- +.|......+........ +|+|+|+||+.+ |+|+|.+||. +.++|++||++| ||+ |..||||
T Consensus 373 vk--~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~~l-FdwiV~rIN~sL~~~~~~~~fIGVLDIyG-FEi-FEkNSFE 447 (1463)
T COG5022 373 VK--RQIKTGGEWIVVPLNLEQALAIRDSLAKALYSNL-FDWIVDRINKSLDHSAAASNFIGVLDIYG-FEI-FEKNSFE 447 (1463)
T ss_pred HH--hHhhcCceEEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCccccccceeEEeecc-hhh-hccCcHH
Confidence 43 344444555555544333 699999999998 9999999986 246899999988 555 7999999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecC-CCCCCCC--Ccceee
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGIGP--DGHIAF 244 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~-~~~G~~~--dGH~a~ 244 (357)
||||||+||||||+|++|+|+.||++|.+|||.|..|+|.||++|+||||+ .|.||.+ |-.|+.
T Consensus 448 QlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~ 514 (1463)
T COG5022 448 QLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVM 514 (1463)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcC
Confidence 999999999999999999999999999999999999999999999999997 4679997 444443
No 5
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=99.96 E-value=1.1e-28 Score=252.59 Aligned_cols=211 Identities=33% Similarity=0.491 Sum_probs=185.5
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.++++..+|+.|.+.|++++ ..+..+++++++
T Consensus 28 i~~~if~~~ee~a~~vA~~I~~~I~~~~-~~~~~~~laLsGGsTP~~~Y~~L~~~~~~~~l~w~~V~~F~~DEr~~vp~d 106 (652)
T PRK02122 28 IPTDIFESSEEASRAVAQEIATLIRERQ-AEGKPCVLGLATGSSPIGVYAELIRMHREEGLSFKNVITFNLDEYYPMQPD 106 (652)
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEEcCCcCHHHHHHHHHhhhhccCCCchheEEEeCeeccCCCCC
Confidence 5788999999999999999999998744 333334333332
Q ss_pred --------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCce
Q psy2118 42 --------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTR 83 (357)
Q Consensus 42 --------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~ 83 (357)
+|.+|++.|+++++||++|||||.||||||||||++..+.++
T Consensus 107 ~~~Sn~~~~re~L~~~i~Ip~~ni~~~dg~~~~~~~~~~~~~Ye~~I~~~gg~DlvLLGiG~DGHiAsnfPgs~~~s~tr 186 (652)
T PRK02122 107 SLQSYHRFMKENLFDHVDIPPENIHIPDGTIPKEEIDEYCRDYEEKIEAAGGIDFQLLGIGRTGHIGFNEPGSGRNSRTR 186 (652)
T ss_pred cHHHHHHHHHHHhhccCCCCHHHeecCCCccCcCCHHHHHHHHHHHHHhhCCCcEEEeCCCCCCceeccCCCCcccccce
Confidence 588999999999999999999999999999999999888889
Q ss_pred EEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEE
Q psy2118 84 LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMI 163 (357)
Q Consensus 84 v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~i 163 (357)
++.++..+...++..|+. .+.+|.+|||||++.|++|++|+++++|++|++++++++++..+..+|++.++.|++++|+
T Consensus 187 ~v~l~~~tr~~aa~~f~~-~~~~P~~rITmgi~~I~~Ar~Iilla~G~~Ka~iv~~~l~g~~~~~~PAs~Lq~h~~~~~~ 265 (652)
T PRK02122 187 LVTLDHITRRDAASDFFG-EENVPRKAITMGVGTILKARRIVLLAWGEHKAPIIKRAVEGEISDEVPASYLQEHPNATFV 265 (652)
T ss_pred EEEccchhhhhhccccCC-CCCCCCceEEeCHHHHHhhCeEEEEEeCHHHHHHHHHHHhCCCCCccchHHhccCCCEEEE
Confidence 888898888877776663 5778899999999999999999999999999999999999877678999999999999999
Q ss_pred eccchhhhhh-------ccccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCc
Q psy2118 164 CDEDATQELR-------VKTVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIR 213 (357)
Q Consensus 164 lD~~a~~~l~-------~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~ 213 (357)
+|..|+..+. +..+.|...++..|--+|.+-..+.+++...++|.+.|+.
T Consensus 266 lD~~AA~~Ltr~~~pw~~~~~~~~~~~~~~~~~~l~~~~~k~~l~l~~~d~~~~~~~ 322 (652)
T PRK02122 266 LDLAAASELTRIKTPWLVTSCEWTDKLIRRAVVWLCQKLGKPILKLTDKDYNENGLS 322 (652)
T ss_pred EcHHHhhhcccCCCCceecccccCHHHHHHHHHHHHHHhCCCcccCchhhhhhcCHH
Confidence 9999988774 3456799999999999999999999999999999999863
No 6
>PRK12358 putative 6-phosphogluconolactonase; Provisional
Probab=99.96 E-value=3.5e-28 Score=222.42 Aligned_cols=167 Identities=28% Similarity=0.433 Sum_probs=142.6
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++++|.+++++.+|+.|.+.|.... . +.+++++
T Consensus 1 m~i~i~~~~~e~~~~~a~~i~~~i~~~~-~----~~l~lsgG~tp~~~y~~L~~~~~~~~~w~~v~~f~~DEv~~~~~~~ 75 (239)
T PRK12358 1 MKIIITKDYEEMSRVAAHHLLGYMSKTK-R----VNLAITAGSTPKGMYEYLITLVKGKAWYDNVHYYNFDEIPFRGKEG 75 (239)
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHhCC-C----eEEEECCCCCHHHHHHHHHHHHhcCCCHHHcEEEeccccCCCCccc
Confidence 8999999999999999999999997722 1 1111111
Q ss_pred -----------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCC-CCCCCceEEecchHH
Q psy2118 42 -----------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGS-SLASRTRLKTLAQET 91 (357)
Q Consensus 42 -----------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~-~~~~~~~v~~~~~~~ 91 (357)
+|.+|++.|.+.++||++|||||.|||||||||++ .+.+.++++.+++.+
T Consensus 76 ~~s~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~y~~~i~~~~~~Dl~lLG~G~DGH~As~fPg~~~~~~~~~~v~~~~~~ 155 (239)
T PRK12358 76 EGVTITNLRNLFFTPAGIKEENIHKLTIDNYREHDQKLARDGGLDLVVLGLGADGHFCGNLPGTTHFHDETVEVPIQGEM 155 (239)
T ss_pred cccHHHHHHHHhcCcCCCCHHHeeCCCHHHHHHHHHHHHhcCCCCEEEEccCCCCceeecCCCCCcCCCceEEEECcHHH
Confidence 68999999999999999999999999999999995 467777888888777
Q ss_pred HHHHh-cccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhh
Q psy2118 92 LEANA-RFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQ 170 (357)
Q Consensus 92 ~~~~a-~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~ 170 (357)
..+.. +.++.+++..|.+|||||++.|++||+++++++|++|++++++++++..+..+|++.++.|++++|++|+.++.
T Consensus 156 ~~~~~~~~~~~~~~~~P~~riTlt~~~i~~A~~i~ll~~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~aa~ 235 (239)
T PRK12358 156 VDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLLLIVNGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAA 235 (239)
T ss_pred HHHhhhhhccCCcccCCCeeEEcchHHHHhCCEEEEEEeCHHHHHHHHHHHcCCCCCCcCcHHhccCCCEEEEECHHHHh
Confidence 76643 45555678888999999999999999999999999999999999998776789999999999999999998876
Q ss_pred hh
Q psy2118 171 EL 172 (357)
Q Consensus 171 ~l 172 (357)
.+
T Consensus 236 ~l 237 (239)
T PRK12358 236 EL 237 (239)
T ss_pred hc
Confidence 54
No 7
>PTZ00014 myosin-A; Provisional
Probab=99.96 E-value=2.8e-30 Score=269.32 Aligned_cols=203 Identities=22% Similarity=0.275 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCC-CCCCCceEEecchHHHHHHhcccCCCCCCCCccc
Q psy2118 42 ECVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGS-SLASRTRLKTLAQETLEANARFFDNDIKKVPKEA 110 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~-~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~r 110 (357)
++++|.+...++.-+.+ +|+||+|+||+.|...+. ...+.+.+..-+.+.+..++.+||+++..+ ...
T Consensus 327 D~~~f~~~~~A~~~lg~s~~e~~~If~ilaaILhLGNi~F~~~~~~~~~~~~~i~~~~~~~l~~~a~LLgv~~~~L-~~~ 405 (821)
T PTZ00014 327 DVKDFEEVMESFDSMGLSESQIEDIFSILSGVLLLGNVEIEGKEEGGLTDAAAISDESLEVFNEACELLFLDYESL-KKE 405 (821)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEeccccCCCCCceeccCCCHHHHHHHHHHhCCCHHHH-HHH
Confidence 45667776666532111 789999999999965332 222334444445567888999999988877 444
Q ss_pred eecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceecccccc-------cceEEEeccchhhhhhccccch
Q psy2118 111 LTVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQMH-------PCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 111 iTlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~~-------~~~i~ilD~~a~~~l~~~~n~f 179 (357)
+|. +.+...+..+...... .-+|+|+|+||+++ |+|+|.+||.. ..+|++||++|++. |+.|||
T Consensus 406 L~~--~~~~~~~e~i~~~~~~~qA~~~rdalaK~lY~rL-F~wiV~~IN~~l~~~~~~~~~IGiLDI~GFE~--f~~NSf 480 (821)
T PTZ00014 406 LTV--KVTYAGNQKIEGPWSKDESEMLKDSLSKAVYEKL-FLWIIRNLNATIEPPGGFKVFIGMLDIFGFEV--FKNNSL 480 (821)
T ss_pred hhc--eEEEeCCeeEecCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCcccCceEEEEecccccc--cCcchH
Confidence 444 3333333333322222 23799999999999 99999999862 35899999998653 689999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
||||||||||||||+|++++|+.||++|.+|||+|..+.|.||++|+|||+++|.||..--.-.+++|+.+
T Consensus 481 EQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLDEec~~p~~t 551 (821)
T PTZ00014 481 EQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILEDQCLAPGGT 551 (821)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999555677888754
No 8
>COG0363 NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.4e-28 Score=223.27 Aligned_cols=163 Identities=42% Similarity=0.627 Sum_probs=140.2
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++++|.+++++++++.|.+.+....+. ++.+++++++
T Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~~~~~~~~-~~~~~l~LsgGsTP~~~ye~L~~~~~~~~~w~~v~~f~~DEr~vp~~~~ 79 (238)
T COG0363 1 MKLIIFEDAEELAKAAAEIIADKLQAAKAE-RGRAVLALSGGSTPLALYEALVKLPQGQLDWSKVTIFNLDERVVPPDDP 79 (238)
T ss_pred CceEEcCCHHHHHHHHHHHHHHHHHhhhhc-cCcEEEEECCCCCHHHHHHHHHhhhccCCCchheEEEeccccccCCCCc
Confidence 889999999999999999999999986543 4445554443
Q ss_pred --------------------------------HHH-HHHHHHHHhCCeeEEEEeecCCCcccccCCCCC-CCCCceEEec
Q psy2118 42 --------------------------------ECV-QYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSS-LASRTRLKTL 87 (357)
Q Consensus 42 --------------------------------~~~-~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~-~~~~~~v~~~ 87 (357)
+|. +|++.|...++||+++||||.|||||||||+++ +.+.+
T Consensus 80 ~Sn~~~~~~~l~~~~~~~~~~i~~~~~~~~~~e~~~~ye~~i~~~~~~Dl~lLG~G~DGHias~fP~~~~l~~~~----- 154 (238)
T COG0363 80 ESNYGLMRRNLFDHIDIPAEFIHNGDASDPDAECAARYEAKLPSAGGFDLILLGMGEDGHIASLFPGTPALDSAT----- 154 (238)
T ss_pred hhHHHHHHHHHhccccCcHhhcCCCCccChhHHHHHHHHhhccccCCCCEEEEcccCCCcccccCCCCccccccc-----
Confidence 566 899999999999999999999999999999987 54333
Q ss_pred chHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccc
Q psy2118 88 AQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDED 167 (357)
Q Consensus 88 ~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~ 167 (357)
+.....+++..+.+.+|.+|||||++.|++|++|+++++|+.|++++++++.++.+..||++.++.|++++|++|++
T Consensus 155 ---~~~~~~~~~~~~~~~~P~~riTlt~~~I~~Ak~v~llv~G~~Ka~al~~~l~~~~~~~~Pas~l~~~~~~~~~~d~~ 231 (238)
T COG0363 155 ---TEEANSRVFVGDSPKVPKERITLTLPTILDAKEVLLLVTGEEKADALKQALEGPVTELYPASILQLHPNVTWFLDEE 231 (238)
T ss_pred ---chhhceeeecCCCCCCCcceEEeCHHHHhcCCeEEEEEcCchHHHHHHHHhcCCCcccccHHHHhcCCCeEEEEchH
Confidence 22334466677888999999999999999999999999999999999999998887789999999999999999999
Q ss_pred hhhhh
Q psy2118 168 ATQEL 172 (357)
Q Consensus 168 a~~~l 172 (357)
++.++
T Consensus 232 A~~~l 236 (238)
T COG0363 232 AASLL 236 (238)
T ss_pred Hhhhc
Confidence 98765
No 9
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=99.95 E-value=1e-29 Score=261.62 Aligned_cols=201 Identities=27% Similarity=0.366 Sum_probs=155.7
Q ss_pred HHHHHHHHHHHhCCee----------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIH----------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~D----------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++++|.+...++.-+. -+|+||+|+|++.|...+......+. ..+.+.+..+|.+||+++..+ ...+
T Consensus 229 D~~~f~~~~~al~~lG~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~--i~~~~~l~~~a~LLgv~~~~L-~~~l 305 (671)
T cd01381 229 DAKDFADIRSAMKVLMFTDQEIWEIFKLLAAILHIGNLRFEATEVDNLAACE--VDDTPNLQRVAQLLGVPIQDL-MDAL 305 (671)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeeccCCCCCcee--eCChHHHHHHHHHhCCCHHHH-hhhh
Confidence 5667777766654211 18899999999999754322223333 346778899999999988877 4455
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc--------cceEEEeccchhhhhhccccch
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH--------PCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~--------~~~i~ilD~~a~~~l~~~~n~f 179 (357)
|. +.+......+..... ...||+++|+||+++ |.|.|.+||.. ..+|++||++|++. |..|+|
T Consensus 306 t~--~~~~~~~e~i~~~~~~~qA~~~rdalak~lY~~l-F~wiV~~IN~~l~~~~~~~~~~IgiLDIfGFE~--f~~Nsf 380 (671)
T cd01381 306 TS--RTIFTRGETVVTPLSREQAVDVRDAFVKGIYGRL-FVWIVRKINAAIYKPVQQSRNSIGVLDIFGFEN--FDVNSF 380 (671)
T ss_pred ce--EEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCccccccceEEEEecCCccc--CCCCCH
Confidence 43 233333333332222 234799999999998 99999999862 34799999999764 688999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||++|++++|+.||++|++|||.|..+.|.||.+|+|||+++|.||..--.-.+.+|...
T Consensus 381 EQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLDee~~~p~~t 451 (671)
T cd01381 381 EQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLIDEESKFPKGT 451 (671)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceechHhhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999555566778643
No 10
>PTZ00285 glucosamine-6-phosphate isomerase; Provisional
Probab=99.95 E-value=2.8e-28 Score=224.95 Aligned_cols=118 Identities=64% Similarity=0.960 Sum_probs=109.9
Q ss_pred CCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKA 313 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~ 313 (357)
+|||+||||||||||+++++.++++.++..++..+..+|..+.+.+|++|||||++.|++||+|+|+++|++|+++|+++
T Consensus 136 LG~G~DGH~AslfP~~~~~~~~~~v~~~~~t~~~~~~~~~~~~~~~p~~riTlt~~~i~~a~~i~l~~~G~~K~~~l~~~ 215 (253)
T PTZ00285 136 AGIGTDGHIAFNEPGSSLDSRTRVKSLNQETIDANARFFGNDISKVPTMALTVGIRTIMEAREVLLLATGASKAIAVARC 215 (253)
T ss_pred eCCCCCCceeecCCCCccCCceEEEECCHHHHHHHhhhccCCcCCCCCccEEcCHHHHHhCCEEEEEecCHHHHHHHHHH
Confidence 39999999999999998888889999998898888888866678889999999999999999999999999999999999
Q ss_pred HhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhh
Q psy2118 314 VEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 351 (357)
Q Consensus 314 l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~ 351 (357)
++++.+.++|+++++.|++++||+|++||+.|..+|+|
T Consensus 216 l~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~~~~~~ 253 (253)
T PTZ00285 216 VEGGVTHMCPASALQMHPAAVLCLDEDATLELKVKTTK 253 (253)
T ss_pred hcCCCCCccchHHhccCCCEEEEEcHHHHhhhhhcccC
Confidence 99987778999999999999999999999999988865
No 11
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=99.95 E-value=9.6e-30 Score=262.07 Aligned_cols=201 Identities=25% Similarity=0.354 Sum_probs=154.4
Q ss_pred HHHHHHHHHHHhCCee----------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIH----------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~D----------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+++.|.+...++.-+. -+|+||+|+|++.|...+....+.+ ...+.+.+..++.+||+++..+ ...+
T Consensus 230 d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~F~~~~~~~~~~~--~~~~~~~l~~~a~LLgv~~~~L-~~~l 306 (677)
T cd01387 230 DADDFRRLLAAMEVLGFSSEDQDSIFRILASILHLGNVYFEKRETDAQEVA--SVVSAREIQAVAELLQISPEGL-QKAI 306 (677)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeEEeeccCCCCccc--ccCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 4567777666553221 1889999999999965432211122 2345667888999999988877 4455
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceecccccc------cceEEEeccchhhhhhccccchhh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQMH------PCTIMICDEDATQELRVKTVNFEQ 181 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~~------~~~i~ilD~~a~~~l~~~~n~feq 181 (357)
|.. .+......+...... .-||+++|+||+++ |+|+|.+||.. ...|++||++|++. |..|+|||
T Consensus 307 t~~--~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~l-F~wiV~~iN~~l~~~~~~~~IgILDIfGFE~--f~~NsfEQ 381 (677)
T cd01387 307 TFK--VTETRREKIFTPLTVESAVDARDAIAKVLYALL-FNWLITRVNALVSPTQDTLSIAILDIYGFED--LSFNSFEQ 381 (677)
T ss_pred ccC--eEEeCCceEeccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCCceEEEEecCcccc--CCCCCHHH
Confidence 442 222222333322222 23799999999998 99999999862 35799999999764 68899999
Q ss_pred HHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 182 LCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 182 ~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||++|++++|+.||++|.+|||+|..+.|.||.+|+|||+++|.||..--.-.+.+|+..
T Consensus 382 LcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLdee~~~p~~t 450 (677)
T cd01387 382 LCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILDDQCCFPQAT 450 (677)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHHHHhcCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999555667788754
No 12
>TIGR00502 nagB glucosamine-6-phosphate isomerase. The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.
Probab=99.95 E-value=2e-27 Score=220.04 Aligned_cols=173 Identities=61% Similarity=1.086 Sum_probs=148.9
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.+++++.+|+.|.+.++......+..+++++++
T Consensus 1 m~i~~~~~~~~l~~~~a~~i~~~i~~~~~~~~~~~~i~lsgGstP~~~y~~L~~~~~~~~i~w~~v~~f~~DEr~~vp~~ 80 (259)
T TIGR00502 1 MRLIILQTYEELSKWAARHIANRINEFKPTAARPFVLGLPTGGTPIGTYKQLIELHQAGKISFQNVTTFNMDEYAGLSEE 80 (259)
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHHhCccccCceEEEEcCCCChHHHHHHHHHHhhccCCchhHeEEEeCeecCCCCCC
Confidence 89999999999999999999999988333323333333322
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
+|++|++.|+..++||++++|||.||||||+||++++.+..+++
T Consensus 81 ~~~Sn~~~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~a~~y~~~i~~~~~~Dl~llG~G~DGH~As~fP~~~~~~~~~~~ 160 (259)
T TIGR00502 81 HPESYHSFMHNNFFQHIDIKPENINILNGNAPDLEAECRRYEEKIRSYGGIDLFMGGIGPDGHIAFNEPGSSLTSRTRIK 160 (259)
T ss_pred chHHHHHHHHHHhcccCCCCHHHEecCCCCccCHHHHHHHHHHHHHHcCCCCEEEEccCCCCceecCCCCCCCCCceEEE
Confidence 68899999999999999999999999999999998877778888
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.+++.+....+++++.+.+..|.+|||||++.|+++++++++++|++|++++++++.+..+..+|++.++.|++++|++|
T Consensus 161 ~l~~~~~~~~~~~~~~~~~~~p~~riTlt~~~i~~a~~vi~~~~G~~Ka~al~~al~~~~~~~~Pas~l~~~~~~~~~~d 240 (259)
T TIGR00502 161 TLTEDTIQANSRFFEGDVNQVPKYALTVGIGTILDSKEVLILVSGHQKALALQKAVEGGVNHMWTISALQLHKHAIVVCD 240 (259)
T ss_pred EcchhhHHHHhhhhcCCCCCCCCceEecCHHHHhhCCEEEEEEcCHHHHHHHHHHHcCCCCCccchHHhccCCCEEEEEc
Confidence 88887776667788767777788999999999999999999999999999999999987667899999999999999999
Q ss_pred cchhhhhh
Q psy2118 166 EDATQELR 173 (357)
Q Consensus 166 ~~a~~~l~ 173 (357)
..++..+.
T Consensus 241 ~~Aa~~l~ 248 (259)
T TIGR00502 241 ENATQELK 248 (259)
T ss_pred HHHHhhhh
Confidence 99887663
No 13
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=99.95 E-value=2.1e-29 Score=259.12 Aligned_cols=201 Identities=32% Similarity=0.397 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHhCCee----------EEEEeecCCCcccccCCCCCCCCCceEEe-cchHHHHHHhcccCCCCCCCCccc
Q psy2118 42 ECVQYEKDIKEAGGIH----------LFVGGIGPDGHIAFNEPGSSLASRTRLKT-LAQETLEANARFFDNDIKKVPKEA 110 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~D----------lvllGiG~dGHiaf~~p~~~~~~~~~v~~-~~~~~~~~~a~~l~~~~~~~p~~r 110 (357)
++..|.+.+.++.-+. -+|+||+|+|++.|...+. .+.+.+.. -+.+.+..+|.+||+++..+ ...
T Consensus 234 D~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~--~~~~~~~~~~~~~~l~~~a~LLgv~~~~L-~~~ 310 (674)
T cd01384 234 DAEEYLATRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEE--IDSSVLKDEKSEFHLKTAAELLMCDEKAL-EDA 310 (674)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCC--CCcccccCcccHHHHHHHHHHhCCCHHHH-HHH
Confidence 5667777766654221 1889999999999964322 12222222 23577888999999988877 444
Q ss_pred eecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc-------cceEEEeccchhhhhhccccch
Q psy2118 111 LTVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH-------PCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 111 iTlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~-------~~~i~ilD~~a~~~l~~~~n~f 179 (357)
+|. +.+......+..... ...||+++|+||+++ |.|.|.+||.. ...|++||++|++. |+.|+|
T Consensus 311 L~~--~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~L-F~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~--f~~Nsf 385 (674)
T cd01384 311 LCK--RVMVTPEEVITKPLDPDSAELSRDALAKTIYSRL-FDWLVNKINSSIGQDPDSKSLIGVLDIYGFES--FKTNSF 385 (674)
T ss_pred hcc--cEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCeEEEEEecccccc--cCcCCH
Confidence 443 233222333322222 234799999999998 99999999852 35799999999764 688999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||++|++++|+.||++|++|||+|..+.|.||.+|+|||+++|.||..--.-.+.+|+..
T Consensus 386 EQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLdee~~~p~~t 456 (674)
T cd01384 386 EQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKST 456 (674)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999555567788754
No 14
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=99.95 E-value=2.8e-29 Score=259.19 Aligned_cols=202 Identities=30% Similarity=0.452 Sum_probs=153.4
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+...|++...++. +| =-+|+||+|+|++.|...+.. .....+...+++.+..+|.+||+++..+ .+.+
T Consensus 240 d~~~f~~~~~al~~lG~~~~~~~~i~~iLaaILhLGni~F~~~~~~-~~~~~~~~~~~~~l~~~a~LLgv~~~~L-~~~l 317 (692)
T cd01385 240 EKHEFERLKQAMEMVGFLAATQKQIFAVLSAVLLLGNVTYKKRATY-HRDESLEVGNPEVVDLLSQLLKVKRETL-MEAL 317 (692)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeeecccC-CCCCceecCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 4556666555543 22 128999999999999754321 1112223346788899999999998877 4455
Q ss_pred ecchhhhhccceEEEee-C---CchhHHHHHHHHhcCCcccceecccccc----------cceEEEeccchhhhhhccc-
Q psy2118 112 TVGVGTVMDAQEVMILI-T---GSHKAFALYKAVEEGVNHMWTVSAFQMH----------PCTIMICDEDATQELRVKT- 176 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~-~---G~~Kadal~k~l~~~~~~~~pv~~l~~~----------~~~i~ilD~~a~~~l~~~~- 176 (357)
|. +.+......+... + ....||+++|+||+++ |.|+|++||.. ...|++||++|++. |..
T Consensus 318 ~~--~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~L-F~wiV~~IN~~l~~~~~~~~~~~~IgiLDI~GFE~--f~~~ 392 (692)
T cd01385 318 TK--KRTVTVNETLILPYSLSEAITARDAMAKCLYSAL-FDWIVLRINHALLNKDDVAVSGLSIGVLDIFGFED--FGRC 392 (692)
T ss_pred cc--CeEEeCCCeEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcccccccccceEEEEEecCcccc--CCCC
Confidence 54 2332223322221 1 2234899999999999 99999999862 24699999999764 567
Q ss_pred cchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 177 VNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 177 n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|+||||||||||||||++|++++|+.||++|++|||+|..+.|.||.+|++||+++|.||..--.-.+.+|+.+
T Consensus 393 NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lLdee~~~p~~t 466 (692)
T cd01385 393 NSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLLDEESNFPHAT 466 (692)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998555567788744
No 15
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=99.95 E-value=2.4e-29 Score=258.89 Aligned_cols=199 Identities=27% Similarity=0.437 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHhCCee----------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIH----------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~D----------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+++.|.+.+.++.-+. -+|+||+|+|++.|...+.. ..+...+.+.+..++.+||+++..+ ...+
T Consensus 234 d~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGNi~F~~~~~~----~~~~~~~~~~l~~~a~LLgv~~~~L-~~~l 308 (677)
T cd01383 234 DAQRFHTLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNE----NHVEPVADEALSTAAKLIGCNIEDL-MLAL 308 (677)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCCC----cccccCChHHHHHHHHHhCCCHHHH-HHHh
Confidence 5667777776654222 28899999999999654321 1222335667889999999998877 4444
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc--------cceEEEeccchhhhhhccccch
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH--------PCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~--------~~~i~ilD~~a~~~l~~~~n~f 179 (357)
|. +.+......+..... ...+|+++|+||+++ |.|.|.+||.. ..+|++||++|++. |..|+|
T Consensus 309 ~~--~~~~~~~e~~~~~~~~~qa~~~rdalak~lY~~l-F~wiV~~IN~~l~~~~~~~~~~IgiLDI~GFE~--f~~Nsf 383 (677)
T cd01383 309 ST--RKMHVNNDNIVQKLTLQQAIDARDALAKSIYASL-FDWLVEQINKSLEVGKRRTGRSISILDIYGFES--FDKNSF 383 (677)
T ss_pred hh--cEEEeCCceEeecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCcccccceEEEeecccccc--CCCCCH
Confidence 43 333333333332222 233799999999998 99999999851 35799999999764 688999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||++|++++|+.||++|++|||+|..++|.||++|++||+++|.||..--.-.+.+|+.+
T Consensus 384 EQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLdee~~~p~~t 454 (677)
T cd01383 384 EQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNAT 454 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhHHHHcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999998444456777643
No 16
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=99.95 E-value=4.9e-29 Score=257.68 Aligned_cols=198 Identities=27% Similarity=0.376 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++..|++.+.++.-+.+ +|+||+|+|++.|...+. .+.+. ..+.+.+..+|.+||+++..+ ...+
T Consensus 244 d~~~f~~~~~al~~lG~~~~e~~~i~~iLaaILhLGni~F~~~~~--~~~~~--~~~~~~l~~~a~LLgv~~~~L-~~~l 318 (693)
T cd01377 244 DAEEFKLTDEAFDILGFSDEEKNSIFKIVAAILHLGNIKFKQRQR--EEQAE--LDGTEEADKAAHLLGVNSADL-LKAL 318 (693)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEecCC--CCccc--cCChHHHHHHHHHhCCCHHHH-HHHh
Confidence 56777777776642211 899999999999965421 12222 335678889999999988877 4455
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
|. +.+......+..... ...||+++|+||+++ |+|+|.+||. ....|++||++|++. |..|+||
T Consensus 319 ~~--~~~~~~~e~i~~~~~~~~A~~~rDalak~lY~~L-F~wiV~~IN~~l~~~~~~~~~IgiLDIfGFE~--f~~NsfE 393 (693)
T cd01377 319 LH--PRIKVGREWVTKGQNVEQVSFSVGALAKALYERL-FLWLVKRINKTLDTKQQRAYFIGVLDIAGFEI--FDFNSFE 393 (693)
T ss_pred cc--eEEEECCeeEeeCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCCCceEEEEecccccc--cCCCCHH
Confidence 44 333333333332222 234799999999998 9999999985 245799999999775 6889999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeec-CCcceeeeecCCCCCCCCCcceeecCCCC
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGKPNGIGPDGHIAFNEPGS 249 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~-~n~~~~~ll~~~~~G~~~dGH~a~~~P~~ 249 (357)
||||||||||||++|++++|+.||++|++|||+|..++|. ||.+|++||+++|.||..--.-.+.+|..
T Consensus 394 QLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lLdee~~~~~~ 463 (693)
T cd01377 394 QLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLLDEECVFPKA 463 (693)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhhhHHhcCCCC
Confidence 9999999999999999999999999999999999999995 99999999999999999844445567753
No 17
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=99.95 E-value=4.3e-29 Score=256.04 Aligned_cols=202 Identities=29% Similarity=0.358 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
.++.|.+...++. +| =-+|+||+|+|++.|...+.... .......+.+.+..+|.+||++...+ ...+
T Consensus 235 ~~~~f~~~~~al~~lg~~~~e~~~I~~iLaaILhLGNi~F~~~~~~~~-~~~~~i~~~~~l~~~A~LLgv~~~~L-~~~L 312 (653)
T cd01379 235 YKDQFEQIEQCFRVIGFTDEEVGSVYRILAAILNLGDIEFGSVASEHQ-TDKSRVSNVAALENAASLLCIRSDEL-QEAL 312 (653)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEEeccccCC-CcccccCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 3556666666553 22 12899999999999975543211 11222346778899999999998887 4444
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc------------cceEEEeccchhhhhhcc
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH------------PCTIMICDEDATQELRVK 175 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~------------~~~i~ilD~~a~~~l~~~ 175 (357)
|. +.+......+..... ...+|+++|+||+++ |.|+|.+||.. ...|++||++|++. |.
T Consensus 313 ~~--~~~~~~ge~i~~~~~~~qA~~~rdalak~lY~~L-F~wiV~~IN~~l~~~~~~~~~~~~~~IgiLDI~GFE~--f~ 387 (653)
T cd01379 313 TS--HCVVTRGETIVRHNTVEKATDARDAMAKALYGRL-FSWIVNRINSLLKHDRNASNSSDQLNVGILDIFGFEN--FK 387 (653)
T ss_pred cc--cEEEeCCceeeecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccccccccccccceEEEEecccccc--CC
Confidence 43 333333333332222 234799999999998 99999999852 24799999999764 68
Q ss_pred ccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 176 TVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 176 ~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
.|+||||||||||||||++|++++|+.||++|++|||+|..+.|.||.+|+|||+++|.||..--.-.+.+|..+
T Consensus 388 ~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lLdee~~~~~~t 462 (653)
T cd01379 388 KNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQAT 462 (653)
T ss_pred CCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHHHHHhcCCCCC
Confidence 899999999999999999999999999999999999999999999999999999999999998444456778643
No 18
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=99.95 E-value=4.6e-29 Score=257.21 Aligned_cols=195 Identities=28% Similarity=0.379 Sum_probs=151.9
Q ss_pred HHHHHHHHHHHhCC--ee--------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGG--IH--------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~--~D--------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++..|++...++.- |+ -+|+||+|+|++.|...+.. . +...+.+.+..++.+||+++..+ ...+
T Consensus 232 d~~~f~~~~~al~~lG~s~~e~~~i~~ilaaILhLGni~f~~~~~~---~--~~~~~~~~l~~~a~LLgv~~~~L-~~~l 305 (674)
T cd01378 232 DKKDFKETQNAMKVIGFSEDEQDEIFRIVAAILHLGNVQFAENGDG---A--AVISDKDVLDFAAYLLGVDPSEL-EKAL 305 (674)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceEEeccCCC---c--cccCChHHHHHHHHHcCCCHHHH-HHHh
Confidence 45677777666542 21 28999999999999654322 1 22346778889999999988877 4444
Q ss_pred ecchhhhhccc----eEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc--------ccceEEEeccchhhhhhcc
Q psy2118 112 TVGVGTVMDAQ----EVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM--------HPCTIMICDEDATQELRVK 175 (357)
Q Consensus 112 Tlt~~~i~~a~----~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~--------~~~~i~ilD~~a~~~l~~~ 175 (357)
|. +.+.... +.+...... ..+|+++|+||+++ |.|.|.+||. ....|++||++|++. |.
T Consensus 306 ~~--~~~~~~~~~~~e~i~~~~~~~~a~~~rdalak~lY~~l-F~wiV~~IN~~l~~~~~~~~~~IgILDIfGFE~--f~ 380 (674)
T cd01378 306 TS--RTIETGGGGRGEVYDVPLNVEQAAYTRDALAKAIYSRL-FDWLVSRINKALQVKSPGKNKVIGVLDIYGFEI--FQ 380 (674)
T ss_pred cc--cEEEeCCCCCceeEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCcccCcceEEEEecccccc--cc
Confidence 43 2222221 333322222 34799999999998 9999999985 234799999999764 68
Q ss_pred ccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecC-CCCCCCCCcceeecCC
Q psy2118 176 TVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGIGPDGHIAFNEP 247 (357)
Q Consensus 176 ~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~-~~~G~~~dGH~a~~~P 247 (357)
.|+||||||||||||||++|++++|+.||++|.+|||.|..+.|.||.+|+|||++ +|.||..--.-.+.+|
T Consensus 381 ~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lLdee~~~p 453 (674)
T cd01378 381 KNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSILDDVCATP 453 (674)
T ss_pred cccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHHHHHHcCC
Confidence 89999999999999999999999999999999999999999999999999999999 8999999666677778
No 19
>PRK09762 galactosamine-6-phosphate isomerase; Provisional
Probab=99.95 E-value=6.8e-27 Score=212.83 Aligned_cols=122 Identities=28% Similarity=0.471 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhcc
Q psy2118 42 ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDA 121 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a 121 (357)
+|.+|++.|+++++||+++||||.|||||||||++++...+++..+++.+.... . ++ +.+.+|.+|||||++.|++|
T Consensus 111 ~~~~y~~~i~~~~~~Dl~lLGmG~DGH~A~n~P~~slfp~~~~~~l~~~~~~~~-~-~~-~~~~~p~~riTlt~~~i~~A 187 (232)
T PRK09762 111 ECERVTNLIARKGGLDLCVLGLGKNGHLGLNEPGESLQPACHISQLDARTQQHE-M-LK-TAGRPVTRGITLGLKDILNA 187 (232)
T ss_pred HHHHHHHHHHhcCCCCEEEEccCCCCceecCCCCCCCCCCceeeeccHhhhhhh-c-cC-CCCCCCCccEEeCHHHHHhc
Confidence 689999999999999999999999999999999988888777666666554322 1 22 34677889999999999999
Q ss_pred ceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEecc
Q psy2118 122 QEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDE 166 (357)
Q Consensus 122 ~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~ 166 (357)
|+++++++|++|++++++++.+..+..||++.++.|+++++++|.
T Consensus 188 ~~i~llv~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~d~ 232 (232)
T PRK09762 188 REVLLLVTGEGKQDATERFLTAKVSTAIPASFLWLHSNFICLIDR 232 (232)
T ss_pred CEEEEEEeCHHHHHHHHHHHcCCCCCcccHHHHhhCCCEEEEecC
Confidence 999999999999999999998776678999999999999999994
No 20
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=99.95 E-value=4.9e-29 Score=257.65 Aligned_cols=198 Identities=28% Similarity=0.400 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHhCC--ee--------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGG--IH--------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~--~D--------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++..|++.+.++.- |+ -+|+||+|+|++.|...+.. .+ ....+.+.+..+|.+||+++..+ ...+
T Consensus 235 d~~~f~~~~~al~~lg~s~~e~~~I~~iLaaILhLGni~F~~~~~~---~~-~~~~~~~~l~~~a~LLgv~~~~L-~~~l 309 (691)
T cd01380 235 DAEDFNATVQALTLLGISEEQQMDIFKLLAALLHLGNIEIEATRND---SS-SISPKDENLQIACELLGVDASDL-RKWL 309 (691)
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccceeeeccCCc---cc-eecCChHHHHHHHHHhCCCHHHH-HHHH
Confidence 56677777766642 21 28999999999999754321 11 22234567888999999988877 4444
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc----------cceEEEeccchhhhhhcccc
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH----------PCTIMICDEDATQELRVKTV 177 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~----------~~~i~ilD~~a~~~l~~~~n 177 (357)
|. +.+......+..... ...||+++|+||+++ |.|.|.+||.. ...|++||++|++. |..|
T Consensus 310 ~~--~~~~~~~e~i~~~~~~~qA~~~rdalak~lY~~L-F~wiV~~iN~~l~~~~~~~~~~~~IgiLDI~GFE~--f~~N 384 (691)
T cd01380 310 VK--RQIVTRSEKIVKPLTKEQAIVARDALAKHIYSKL-FDWIVDVINKSLNTGEVKKKQTSFIGVLDIYGFET--FEKN 384 (691)
T ss_pred Hh--CEEEECCeeEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcCcccCCccceEEEEecCcccc--cCCC
Confidence 44 333333333332222 233799999999998 99999999862 23799999999764 6889
Q ss_pred chhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 178 NFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 178 ~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
+||||||||||||||++|++++|+.||++|++|||+|..+.|.||++|+|||+++ .||..--.-.+.+|+.+
T Consensus 385 sfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~-~Gil~lLdee~~~p~~t 456 (691)
T cd01380 385 SFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIESK-LGILSLLDEECRLPKGS 456 (691)
T ss_pred CHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhCC-CchHHHhHHhhcCCCCC
Confidence 9999999999999999999999999999999999999999999999999999975 79998555566778643
No 21
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=99.95 E-value=5.4e-29 Score=257.96 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=154.6
Q ss_pred HHHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+++.|++.+.++.-+.+ +|+||+|+|++.|...+. ....+.+...+.+.+..+|.+||+++..+ ...+
T Consensus 260 D~~~f~~~~~Al~~lg~s~~e~~~i~~iLaaILhLGni~F~~~~~-~~~~~~~~~~~~~~l~~~a~LLgv~~~~L-~~~l 337 (717)
T cd01382 260 DYGDFQRMCVALKKIGLDDTEKLDLFRVVAGVLHLGNIDFEEAGS-TSGGCNVKNQSEQSLEYCAELLGLDQDDL-RVSL 337 (717)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCceeEeccCC-CCCcceecCCCHHHHHHHHHHcCCCHHHH-HHHH
Confidence 45667777666542211 889999999999975432 22334444456778889999999988877 4444
Q ss_pred ecchhhhhc----cc-eEEEeeC----CchhHHHHHHHHhcCCcccceeccccc------ccceEEEeccchhhhhhccc
Q psy2118 112 TVGVGTVMD----AQ-EVMILIT----GSHKAFALYKAVEEGVNHMWTVSAFQM------HPCTIMICDEDATQELRVKT 176 (357)
Q Consensus 112 Tlt~~~i~~----a~-~i~~~~~----G~~Kadal~k~l~~~~~~~~pv~~l~~------~~~~i~ilD~~a~~~l~~~~ 176 (357)
|. +.+.. ++ .++.... ....||+++|+||+++ |.|.|.+||. ....|++||++|++. |..
T Consensus 338 ~~--r~~~~~~g~~~~~~i~~~l~~~qA~~~rdalak~lY~~L-F~wiV~~IN~~l~~~~~~~~IgiLDIfGFE~--f~~ 412 (717)
T cd01382 338 TT--RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKAVYSHL-FDHVVSRVNQCFPFETSSNFIGVLDIAGFEY--FEH 412 (717)
T ss_pred hh--eEEecccccCCCceEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCCcEEEEEecccccc--CCC
Confidence 43 22210 12 2222211 1234799999999998 9999999985 245899999999764 688
Q ss_pred cchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 177 VNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 177 n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|+||||||||||||||++|++++|+.||++|++|||+|..+.|.||.+|++||+++|.||..--.-.+.+|+.+
T Consensus 413 NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLDee~~~p~~t 486 (717)
T cd01382 413 NSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILDEENRLPQPS 486 (717)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhHHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998555556778643
No 22
>KOG0164|consensus
Probab=99.94 E-value=7.2e-29 Score=243.76 Aligned_cols=228 Identities=25% Similarity=0.369 Sum_probs=166.5
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCch----hH
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSH----KA 134 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~----Ka 134 (357)
++++++|+||+.|..-+.+.. ..+-..+...++++++..+.+ +=+|+.+++...+.++.-.-... -|
T Consensus 269 iiAavLhLGNv~f~~~ed~~~------~~~~~~l~~~aell~v~~del---~~aL~~Rtvaa~~e~v~k~hn~~qA~YaR 339 (1001)
T KOG0164|consen 269 IIAAVLHLGNVEFADNEDSSG------IVNGAQLKYIAELLSVTGDEL---ERALTSRTVAAGGEIVLKQHNVEQASYAR 339 (1001)
T ss_pred HHHHHHhccceEEeecCcccc------cchhHHHHHHHHHHcCCHHHH---HHHHHHHHHHhccchhhccccHHHHHHHH
Confidence 789999999999965443211 112256677889999877777 34455578888888776544333 36
Q ss_pred HHHHHHHhcCCcccceecccccc------------cceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchh
Q psy2118 135 FALYKAVEEGVNHMWTVSAFQMH------------PCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQY 202 (357)
Q Consensus 135 dal~k~l~~~~~~~~pv~~l~~~------------~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~ 202 (357)
||++|++|+++ |.|++++||.. +.++|+||+++++- |..|||||||||||||||||.|++.++++
T Consensus 340 DAlAKaiY~Rl-F~Wiv~rIn~~i~~~~~~~~~~~~~Vigvldiygfei--f~~NSFEQfcINYCNEKLQQlFIel~LKq 416 (1001)
T KOG0164|consen 340 DALAKAIYSRL-FTWIVNRINRSIEVKGVITLRKGNTVIGVLDIYGFEI--FQDNSFEQFCINYCNEKLQQLFIELVLKQ 416 (1001)
T ss_pred HHHHHHHHHHH-HHHHHHhhhhheecccccccccCceEEEEEEeeeEEe--ecCCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998 99999999861 35899999999653 68999999999999999999999999999
Q ss_pred hHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCc
Q psy2118 203 EQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKE 282 (357)
Q Consensus 203 e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~ 282 (357)
||+||++|||.|..|+|++|..++||+|.+-.||..--.-+++-||.- .+.+++-++++.. . ....|.+. +..+.
T Consensus 417 EQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailDe~Cl~~G~v-tD~tfL~~l~~~~-~-~H~Hy~sr--~~~~~ 491 (1001)
T KOG0164|consen 417 EQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILDEACLRPGTV-TDETFLEKLNQKL-K-KHPHYTSR--KLKQT 491 (1001)
T ss_pred hHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhhHHhcCCCcc-chHHHHHHHHHHh-h-hCCcchhh--hcccc
Confidence 999999999999999999999999999999999999555667778843 3344443433221 1 12222111 11112
Q ss_pred eEEeCHHH---HhccceEEEEEcC
Q psy2118 283 ALTVGVGT---VMDAQEVMILITG 303 (357)
Q Consensus 283 riTlt~~~---i~~a~~v~~~~~G 303 (357)
.=||+... ..-|-.|.+-++|
T Consensus 492 dksl~~~~Fri~HYAG~V~YsV~g 515 (1001)
T KOG0164|consen 492 DKSLGFSDFRITHYAGDVTYSVEG 515 (1001)
T ss_pred ccccCccceeEEEeccceEEEEEe
Confidence 23333322 2357778888877
No 23
>COG0363 NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism]
Probab=99.94 E-value=6.9e-27 Score=212.15 Aligned_cols=106 Identities=45% Similarity=0.640 Sum_probs=95.5
Q ss_pred CCCCCCCcceeecCCCCC-CCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHH
Q psy2118 233 PNGIGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALY 311 (357)
Q Consensus 233 ~~G~~~dGH~a~~~P~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~ 311 (357)
.+|||+||||||||||++ +...+ +...+.++|..+.|.+|.+|||||++.|++||+|+++|+|++|+++++
T Consensus 131 lLG~G~DGHias~fP~~~~l~~~~--------~~~~~~~~~~~~~~~~P~~riTlt~~~I~~Ak~v~llv~G~~Ka~al~ 202 (238)
T COG0363 131 LLGMGEDGHIASLFPGTPALDSAT--------TEEANSRVFVGDSPKVPKERITLTLPTILDAKEVLLLVTGEEKADALK 202 (238)
T ss_pred EEcccCCCcccccCCCCccccccc--------chhhceeeecCCCCCCCcceEEeCHHHHhcCCeEEEEEcCchHHHHHH
Confidence 349999999999999987 65544 345566777778899999999999999999999999999999999999
Q ss_pred HHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 312 KAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 312 ~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
++++|+++..||+++++.|+++.||+|++|++.|.
T Consensus 203 ~~l~~~~~~~~Pas~l~~~~~~~~~~d~~A~~~l~ 237 (238)
T COG0363 203 QALEGPVTELYPASILQLHPNVTWFLDEEAASLLK 237 (238)
T ss_pred HHhcCCCcccccHHHHhcCCCeEEEEchHHhhhcc
Confidence 99999988889999999999999999999999874
No 24
>KOG3147|consensus
Probab=99.94 E-value=1.8e-26 Score=204.07 Aligned_cols=199 Identities=19% Similarity=0.212 Sum_probs=135.2
Q ss_pred ceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHH------
Q psy2118 122 QEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYF------ 195 (357)
Q Consensus 122 ~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~------ 195 (357)
.+.-+..+|.+=-.+|.+.++.. +...+.-..-.|++.|+..--.-.-.+| +.++.-.-+.++....
T Consensus 40 g~F~i~lSGGSLi~~L~~~l~~~-----~~~~i~w~kW~if~~DER~Vp~~~~dSN--yg~~~~~~l~~v~~~~~~i~~i 112 (252)
T KOG3147|consen 40 GRFTLALSGGSLIQVLSKLLESP-----YQDDIDWSKWHIFFVDERVVPLDDPDSN--YGLAKRHFLSKVPIPHYNIYPI 112 (252)
T ss_pred CeEEEEEcCCcHHHHHHHHhccc-----ccCCCCccceEEEEEeccccCCCCCccc--HHHHHHhhhhhCCCCcCcEEEC
Confidence 34667778988888899888863 2222332345688888854211000111 1122111112221111
Q ss_pred hhhc---chhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCC-CCC-CccceEEecchHHHHHhhh
Q psy2118 196 NQHV---FQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPG-SSL-ASRTRLKTLAQETLEANAR 270 (357)
Q Consensus 196 ~~~~---f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~-~~~-~~~~~~~~~~~~~~~~~~~ 270 (357)
+..+ -+...++|+++-...-. .++.|.+||+ ++|||+|||||||||| ..+ +...+++.+
T Consensus 113 d~~L~~~~~~~a~~ye~~l~~~v~---~~s~p~FDL~---LLG~GpDGHtaSLFP~~~~l~e~~~wV~~i---------- 176 (252)
T KOG3147|consen 113 DESLIADAEEAADLYEKELKALVA---NDSFPVFDLL---LLGMGPDGHTASLFPGHPLLNEKLKWVVPI---------- 176 (252)
T ss_pred ChhhccCHHHHHHHHHHHHHHHhc---cCCCcceeEE---EeccCCCCCeeecCCCchhhhcccCEEEEe----------
Confidence 1111 12334666665432211 1446788887 7799999999999999 444 444556666
Q ss_pred ccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccC-CcEEEEeeHHHHhhhhh
Q psy2118 271 FFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMH-PCTIMICDEDATQELRV 347 (357)
Q Consensus 271 ~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~-~~~~~~~D~~aa~~l~~ 347 (357)
+++|++|+.|||+|+|+|++|++|.|+++|+.||++++.+++... ..+|++++.++ ++++||+|++|+++++.
T Consensus 177 ---tdSPkpPp~RITlTLPvIn~A~~v~fvv~G~~Ka~iv~~i~~~~~-~~lPaa~V~~~~~~l~WflD~~A~~~l~~ 250 (252)
T KOG3147|consen 177 ---TDSPKPPPKRITLTLPVINHAKNVAFVVCGASKAEIVKAILEDKE-KKLPAALVNPAKGKLVWFLDDDAASKLPV 250 (252)
T ss_pred ---CCCCCCCCccEEEehHHhhhhhceEEEEeCcchhHhHHHHHhccc-ccCCchheeccCCeEEEEEchHHhcCCCC
Confidence 578999999999999999999999999999999999999999854 57999999975 48999999999998863
No 25
>PLN02360 probable 6-phosphogluconolactonase
Probab=99.94 E-value=3e-26 Score=212.91 Aligned_cols=118 Identities=24% Similarity=0.313 Sum_probs=97.9
Q ss_pred HHHHHHHHHHH--------------hCCeeEEEEeecCCCcccccCCCCCC-CCCc-eEEecchHHHHHHhcccCCCCCC
Q psy2118 42 ECVQYEKDIKE--------------AGGIHLFVGGIGPDGHIAFNEPGSSL-ASRT-RLKTLAQETLEANARFFDNDIKK 105 (357)
Q Consensus 42 ~~~~y~~~i~~--------------~~~~DlvllGiG~dGHiaf~~p~~~~-~~~~-~v~~~~~~~~~~~a~~l~~~~~~ 105 (357)
+|.+|++.|++ .++||++|||||+|||||||||+++. .... .++.. .+++.
T Consensus 123 ~a~~ye~~l~~~~~~~~~~~~~~~~~p~fDlvlLGmG~DGHtASlFPg~~~l~~~~~~v~~~-------------~~~~~ 189 (268)
T PLN02360 123 AATDYEFAIRQLVKTRTIGVSDISDCPKFDLILLGMGSDGHVASLFPNHPALEEKDDWVTFI-------------TDSPK 189 (268)
T ss_pred HHHHHHHHHHHHhhccccccccccCCCcccEEEEccCCCCceeccCCCCchhhhccceEEee-------------cCCCC
Confidence 78899999977 34799999999999999999999763 2222 22211 24567
Q ss_pred CCccceecchhhhhccceEEEeeCCchhHHHHHHHHh----cCCcccceeccccccc-ceEEEeccchhhhh
Q psy2118 106 VPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE----EGVNHMWTVSAFQMHP-CTIMICDEDATQEL 172 (357)
Q Consensus 106 ~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~----~~~~~~~pv~~l~~~~-~~i~ilD~~a~~~l 172 (357)
.|.+|||||++.|++|++++++++|++|++++++++. +..+..+|++.++.++ +++|++|..+++++
T Consensus 190 ~p~~RITlt~~~i~~A~~i~llv~G~~Ka~al~~~l~~~~~~~~~~~~Pas~l~~~~~~~~w~~D~~Aa~~l 261 (268)
T PLN02360 190 PPPERITFTLPVINSASNVAVVATGESKANAVHLAIDDVTEGPDAPSLPARMVQPTKGKLVWFLDKPAASKL 261 (268)
T ss_pred CCCceEEEcHHHHhcCCeEEEEEeCccHHHHHHHHHhhccCCCCcccCChhhhcCCCCcEEEEECHHHHhhC
Confidence 8889999999999999999999999999999999995 4444589999999875 89999999988765
No 26
>PRK12358 putative 6-phosphogluconolactonase; Provisional
Probab=99.94 E-value=2.9e-26 Score=209.77 Aligned_cols=118 Identities=30% Similarity=0.452 Sum_probs=103.4
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCC-CCCccceEEecchHHHHH-hhhccCCCCCCCCCceEEeCHHHHhccceEEEEE
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGS-SLASRTRLKTLAQETLEA-NARFFDNDIKKVPKEALTVGVGTVMDAQEVMILI 301 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~-~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~ 301 (357)
.++-+| |||+|||+||||||+ .+++.++++.++..++.. +.+.|..+.+++|++|||||++.|++||+|+|++
T Consensus 119 ~Dl~lL-----G~G~DGH~As~fPg~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~P~~riTlt~~~i~~A~~i~ll~ 193 (239)
T PRK12358 119 LDLVVL-----GLGADGHFCGNLPGTTHFHDETVEVPIQGEMVDIVAHGELGGDFSLVPDSYVTMGPKSIMAAKNLLLIV 193 (239)
T ss_pred CCEEEE-----ccCCCCceeecCCCCCcCCCceEEEECcHHHHHHhhhhhccCCcccCCCeeEEcchHHHHhCCEEEEEE
Confidence 345555 999999999999994 578888998888777655 3455544678899999999999999999999999
Q ss_pred cCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 302 TGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 302 ~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
+|++|+++|+++++++++.++||++++.|++++||+|++|++.|+
T Consensus 194 ~G~~Ka~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D~~aa~~l~ 238 (239)
T PRK12358 194 NGKGKAQILKKVLQGPVTEDVPASILQLHPNLTVILDEAAAAELA 238 (239)
T ss_pred eCHHHHHHHHHHHcCCCCCCcCcHHhccCCCEEEEECHHHHhhcc
Confidence 999999999999999888899999999999999999999998774
No 27
>TIGR01198 pgl 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with
Probab=99.94 E-value=5.3e-26 Score=207.20 Aligned_cols=128 Identities=27% Similarity=0.295 Sum_probs=98.4
Q ss_pred chhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC-CCccceEEecchHHHHHhhhccCCCCCC
Q psy2118 200 FQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKK 278 (357)
Q Consensus 200 f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 278 (357)
...+.+.|+++-....... ..|.+|++ .+|||+||||||||||++ ++..++.+... .+.++
T Consensus 104 ~~~~a~~y~~~i~~~~~~~---~~p~fDl~---lLGmG~DGHtASlFPg~~~l~~~~~~~~~~------------~~~~~ 165 (233)
T TIGR01198 104 IEEAAELYEQELAAAFQPI---VFPVFDLL---LLGMGPDGHTASLFPHTPALQETERLVTVL------------TKSPK 165 (233)
T ss_pred HHHHHHHHHHHHHHhhccc---CCCcccEE---EECCcCCccceeCCCCChhhccccceEEee------------cCCCC
Confidence 3456677776532221110 22455655 459999999999999965 34444433221 24678
Q ss_pred CCCceEEeCHHHHhccceEEEEEcCchHHHHHHHHHh-cCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 279 VPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE-EGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 279 ~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~-~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
+|++|||||++.|++||+|+|+++|++|+++++++++ ++.+.++||+.++.|++++||+|++|++.|
T Consensus 166 ~p~~RITlt~~~i~~a~~i~~lv~G~~Ka~~~~~~l~~~~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 233 (233)
T TIGR01198 166 PPHERITLTLPAINAARKVFLLIAGEEKRNALAEALAVEAEPYPLPAAGVLHSGKTLWLLDYAAARKL 233 (233)
T ss_pred CCCCcEEecHHHHhcCCeEEEEEEChHHHHHHHHHHhcCCCcccCCHhHcCCCCcEEEEEChHhhhcC
Confidence 8999999999999999999999999999999999999 666678999999999999999999999754
No 28
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=99.94 E-value=6.5e-28 Score=250.04 Aligned_cols=200 Identities=32% Similarity=0.432 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+++.|.+...++.-+.+ +|+||+|+|++.|...+..... .+...+.+.+..++.+||++...+ ...+
T Consensus 230 d~~~f~~~~~al~~lg~~~~e~~~i~~iLaaILhLGni~f~~~~~~~~~--~~~~~~~~~l~~~a~LLgv~~~~L-~~~l 306 (679)
T cd00124 230 DAEEFEELKEALKSLGFSEEEIESIFRILAAILHLGNIEFKSVGGEGQE--AAEVKNTEVLSKAAELLGLDPEEL-EEAL 306 (679)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCeeEEecCCCCcc--eeecCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 56777777776643222 8899999999999765433211 344557788999999999988777 4444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
|. +.+.....++...... ..||+++|.||+++ |.|.|.+||. ....|++||.+|++. +..|+||
T Consensus 307 ~~--~~~~~~~~~~~~~~~~~~a~~~rdalak~lY~~l-F~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~--f~~NsfE 381 (679)
T cd00124 307 TY--KVTKVGGEVITIPLTKEEAVDSRDSLAKALYSRL-FDWIVSRINSSLKPKDGRSLFIGILDIFGFEI--FEKNSFE 381 (679)
T ss_pred hc--cEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCceeeEEecccccc--CCCCCHH
Confidence 44 2232222333322222 33799999999998 9999999986 235799999999764 6789999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCC
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGS 249 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~ 249 (357)
||||||||||||++|++++|+.||++|++|||.|..+.|.||.+|++||++++.||..--.-.+.+|+.
T Consensus 382 QLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLdee~~~~~~ 450 (679)
T cd00124 382 QLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLDEECLFPKG 450 (679)
T ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999854556667753
No 29
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=99.93 E-value=1e-27 Score=248.09 Aligned_cols=199 Identities=32% Similarity=0.459 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHhCC--ee--------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGG--IH--------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~--~D--------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++..|.+...++.. |+ -+|+||+|+|++.|...+...... ...+.+.+..+|.+||++...+ ...+
T Consensus 238 d~~~f~~~~~al~~lG~~~~e~~~I~~iLaaILhLGni~F~~~~~~~~~~---~~~~~~~l~~~a~LLgv~~~~L-~~~l 313 (677)
T smart00242 238 DAEEFKETLNAMRVLGFSEEEQESIFKILAAILHLGNIEFEEGRNDNAAS---TVKDKEELENAAELLGVDPEEL-EKAL 313 (677)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCCCccc---ccCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 56677766666532 21 288999999999996543321111 1346778889999999988777 4444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
|. +.+......+...... ..+|+++|.||+++ |.|.|.+||. ....|++||++|++. +..|+||
T Consensus 314 ~~--~~~~~~~e~~~~~~~~~~a~~~rd~lak~lY~~l-F~wiV~~iN~~l~~~~~~~~~IgiLDifGFE~--f~~NsfE 388 (677)
T smart00242 314 TK--RKIKTGGEVITKPLNVEQALDARDALAKALYSRL-FDWLVKRINKSLSFKDGSTYFIGVLDIYGFEI--FEVNSFE 388 (677)
T ss_pred cc--cEEEeCCceEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCceEEEEEecccccc--cccCCHH
Confidence 43 2332223333322222 34799999999998 9999999986 235799999999764 6789999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCC
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGS 249 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~ 249 (357)
||||||||||||++|++++|+.||++|++|||.|..+.|.||.+|++||+++|.||..--.-.+.+|+.
T Consensus 389 QLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLdee~~~~~~ 457 (677)
T smart00242 389 QLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLDEECRFPKA 457 (677)
T ss_pred HHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999844455667764
No 30
>TIGR00502 nagB glucosamine-6-phosphate isomerase. The set of proteins recognized by this model includes a closely related pair from Bacillus subtilis, one of which is uncharacterized but included as a member of the orthologous set.
Probab=99.93 E-value=8.3e-26 Score=209.29 Aligned_cols=128 Identities=64% Similarity=1.063 Sum_probs=115.6
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||||||||++.+.+.++++.++..+.....++|+.+.+.+|++|||||++.|++||+|+++++|
T Consensus 131 ~Dl~ll-----G~G~DGH~As~fP~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~riTlt~~~i~~a~~vi~~~~G 205 (259)
T TIGR00502 131 IDLFMG-----GIGPDGHIAFNEPGSSLTSRTRIKTLTEDTIQANSRFFEGDVNQVPKYALTVGIGTILDSKEVLILVSG 205 (259)
T ss_pred CCEEEE-----ccCCCCceecCCCCCCCCCceEEEEcchhhHHHHhhhhcCCCCCCCCceEecCHHHHhhCCEEEEEEcC
Confidence 355556 999999999999998888888998888877777778887666778899999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhcccC
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKVR 356 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~~~ 356 (357)
++|+++++++++++.+.++||+.++.|++++||+|++||+.|+.++.+|++-.
T Consensus 206 ~~Ka~al~~al~~~~~~~~Pas~l~~~~~~~~~~d~~Aa~~l~~~~~~~~~~~ 258 (259)
T TIGR00502 206 HQKALALQKAVEGGVNHMWTISALQLHKHAIVVCDENATQELKVKTVEYFNEL 258 (259)
T ss_pred HHHHHHHHHHHcCCCCCccchHHhccCCCEEEEEcHHHHhhhhHHHHHHhhcc
Confidence 99999999999998878999999999999999999999999999999988753
No 31
>TIGR01198 pgl 6-phosphogluconolactonase. This enzyme of the pentose phosphate pathway is often found as a part of a multifunctional protein with
Probab=99.93 E-value=1.3e-25 Score=204.58 Aligned_cols=154 Identities=23% Similarity=0.302 Sum_probs=115.7
Q ss_pred EEcCCHHHHHHHHHHHHHHHHhccCCCCCccccc----cchHHHHHHHHHHHHhCC------eeEEEEeecCCCcccccC
Q psy2118 4 IILDDVSNVAEWSARYVLKKITDFKPGPDNYFVL----GLPTECVQYEKDIKEAGG------IHLFVGGIGPDGHIAFNE 73 (357)
Q Consensus 4 ~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~----gl~~~~~~y~~~i~~~~~------~DlvllGiG~dGHiaf~~ 73 (357)
+..+|++++...+.+.+.+.+.. +....+.+. ....+|++|++.|.+.++ ||++|||||+||||||||
T Consensus 67 Vp~~~~~SN~~~~~~~Ll~~~~i--~~~~i~~~~~~~~~~~~~a~~y~~~i~~~~~~~~~p~fDl~lLGmG~DGHtASlF 144 (233)
T TIGR01198 67 VPLDHADSNTGLAREALLDRVAI--PASNIHPMPTELSDIEEAAELYEQELAAAFQPIVFPVFDLLLLGMGPDGHTASLF 144 (233)
T ss_pred cCCCCccchHHHHHHHHhccCCC--ChhheeeCCCccCCHHHHHHHHHHHHHHhhcccCCCcccEEEECCcCCccceeCC
Confidence 44556666666666666655532 222222222 133589999999988753 799999999999999999
Q ss_pred CCCCCC-CCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHh-cCCccccee
Q psy2118 74 PGSSLA-SRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE-EGVNHMWTV 151 (357)
Q Consensus 74 p~~~~~-~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~-~~~~~~~pv 151 (357)
|+++.. +.++.+. ...+++..|.+|||||++.|++|++++++++|++|+++++++++ +..+..+|+
T Consensus 145 Pg~~~l~~~~~~~~------------~~~~~~~~p~~RITlt~~~i~~a~~i~~lv~G~~Ka~~~~~~l~~~~~~~~~Pa 212 (233)
T TIGR01198 145 PHTPALQETERLVT------------VLTKSPKPPHERITLTLPAINAARKVFLLIAGEEKRNALAEALAVEAEPYPLPA 212 (233)
T ss_pred CCChhhccccceEE------------eecCCCCCCCCcEEecHHHHhcCCeEEEEEEChHHHHHHHHHHhcCCCcccCCH
Confidence 997532 2222111 11246778889999999999999999999999999999999998 455457999
Q ss_pred cccccccceEEEeccchhhh
Q psy2118 152 SAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 152 ~~l~~~~~~i~ilD~~a~~~ 171 (357)
+.++.+++++|++|.++++.
T Consensus 213 s~l~~~~~~~~~~D~~Aa~~ 232 (233)
T TIGR01198 213 AGVLHSGKTLWLLDYAAARK 232 (233)
T ss_pred hHcCCCCcEEEEEChHhhhc
Confidence 99998899999999988754
No 32
>KOG3148|consensus
Probab=99.93 E-value=2e-26 Score=194.71 Aligned_cols=127 Identities=80% Similarity=1.193 Sum_probs=122.0
Q ss_pred eeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCch
Q psy2118 226 LQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSH 305 (357)
Q Consensus 226 ~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~ 305 (357)
++|+ ..|||+|||+|||+||+++.++||+..+.+.|+.+|.|||+.+..++|.+++|.|..++|.||+|++++||+.
T Consensus 131 idlf---vggigpdghiafnepgsslvsrtrvktla~dti~anarffdgd~tkvpt~altvgvgtvmdarevmilitgah 207 (273)
T KOG3148|consen 131 IDLF---VGGIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGDLTKVPTQALTVGVGTVMDAREVMILITGAH 207 (273)
T ss_pred eEEE---eeccCCCCceeeCCCcchhhhhhhHHHHhHHHHHhhceecCCccccCccceeEeeeeeeeecceEEEEEeccH
Confidence 5666 4699999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhccc
Q psy2118 306 KAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKV 355 (357)
Q Consensus 306 Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~~ 355 (357)
||-++.++++..++..|.+|.+|.|+++++++|++|.-+|++||.||||-
T Consensus 208 kafalykaieegvnhmwtvsafqqh~~t~ficdedatlelkvktvkyfkg 257 (273)
T KOG3148|consen 208 KAFALYKAIEEGVNHMWTVSAFQQHPRTTFICDEDATLELKVKTVKYFKG 257 (273)
T ss_pred HHHHHHHHHHhcccceeehhhHhhCCceEEEecCCceeEEEeeehHHHHH
Confidence 99999999998899999999999999999999999999999999999984
No 33
>KOG0162|consensus
Probab=99.92 E-value=1.1e-26 Score=228.80 Aligned_cols=190 Identities=31% Similarity=0.457 Sum_probs=143.4
Q ss_pred HHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCcccee
Q psy2118 43 CVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALT 112 (357)
Q Consensus 43 ~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riT 112 (357)
-++|++.+.+..-+.+ +++||++.|||.|.+-+.. +.| -+.+.+.-.+.+||+++..+ .+.+|
T Consensus 251 ~kdfq~Tl~AM~vIGi~~~eQ~~v~rmva~IL~lGNIsF~Ee~~~----a~V--~~~~~~~f~ayLlgi~s~~l-~~~Lt 323 (1106)
T KOG0162|consen 251 RKDFQETLHAMKVIGINQEEQDEVLRMVAGILHLGNISFIEEGNY----AAV--SDKSVLEFPAYLLGIDSARL-EEKLT 323 (1106)
T ss_pred HHHHHHHHHHheeccCChHHHHHHHHHHHHHHhccceeEEeeCCc----cee--ccchHHHhHHHHhcCCHHHH-HHHHH
Confidence 4678887777642222 7899999999999884321 111 13345556678888877666 44444
Q ss_pred cchhhhhccc----e-EEEeeC----CchhHHHHHHHHhcCCcccceeccccc--------ccceEEEeccchhhhhhcc
Q psy2118 113 VGVGTVMDAQ----E-VMILIT----GSHKAFALYKAVEEGVNHMWTVSAFQM--------HPCTIMICDEDATQELRVK 175 (357)
Q Consensus 113 lt~~~i~~a~----~-i~~~~~----G~~Kadal~k~l~~~~~~~~pv~~l~~--------~~~~i~ilD~~a~~~l~~~ 175 (357)
- .+|.++ + ++-+.- ....||||+|++|.++ |+|+|.++|. ....|++||++|+ || |.
T Consensus 324 ~---R~M~s~~G~kr~~~~v~LNv~QA~~~RDAlakaiy~~l-FD~lV~rvNkam~~~~~~~~~sIGiLDIYGF-EI-Fe 397 (1106)
T KOG0162|consen 324 S---RIMESKWGGKREVIHVPLNVEQASYTRDALAKAIYARL-FDWLVERVNKAMQAFKGSEEYSIGILDIYGF-EI-FE 397 (1106)
T ss_pred H---HHHhhcccccceeEEecccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCCccccceeeEEeeee-ee-cc
Confidence 3 333332 2 222222 2234899999999998 9999999885 2357999999984 55 78
Q ss_pred ccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecC-CCCCCCC--Ccceeec
Q psy2118 176 TVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGIGP--DGHIAFN 245 (357)
Q Consensus 176 ~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~-~~~G~~~--dGH~a~~ 245 (357)
.|+|||+||||.||||||.|++..++.|||+|.+|||.|.+|.|+||...+||||. +|-||.. |.-||-.
T Consensus 398 ~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~ldD~~At~ 470 (1106)
T KOG0162|consen 398 NNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSALDDVCATA 470 (1106)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999996 4678886 5555553
No 34
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=99.92 E-value=1.2e-26 Score=241.14 Aligned_cols=201 Identities=18% Similarity=0.200 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHhCCeeE----------EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIHL----------FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~Dl----------vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+++.|++...++.-+.+ +|+||+|+|++.|.. . .......+.+.+..+|.+||++...+ ...+
T Consensus 232 D~~~f~~~~~Al~~lGfs~~e~~~If~iLaaILhLGNi~f~~-~-----~~~~~~~~~~~~~~vA~LLgv~~~~L-~~al 304 (767)
T cd01386 232 AAIDFSRLQQAMEVLGISEGEQRAIWRVLAAIYHLGAAGATK-V-----AGRKQFARPEWAQKAAELLGCPLEEL-SSAT 304 (767)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceeee-c-----CCccccCCHHHHHHHHHHhCCCHHHH-HHHh
Confidence 45677777766532111 889999999999853 1 11122336677888999999988776 3333
Q ss_pred ec-chhhhhcc-----------ceEE---EeeCCchhHHHHHHHHhcCCcccceecccccc-------cceEEEeccchh
Q psy2118 112 TV-GVGTVMDA-----------QEVM---ILITGSHKAFALYKAVEEGVNHMWTVSAFQMH-------PCTIMICDEDAT 169 (357)
Q Consensus 112 Tl-t~~~i~~a-----------~~i~---~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~-------~~~i~ilD~~a~ 169 (357)
+. ++...... +.+. ......+-+|+|+|+||+++ |+|.|.+||.. ...|++||++|+
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~rdalaK~lY~rL-F~wiV~~IN~~l~~~~~~~~~IgiLDIfGF 383 (767)
T cd01386 305 FKHTLRGGINQMTTGPQRPGLSDTETSSGLKMTAVECLEGMASGLYSEL-FAAVVSLINRSISSSHHSIASIMLVDTPGF 383 (767)
T ss_pred cccEEeecceeeeccccccccccccccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCCCcEEEEEecccc
Confidence 21 11111000 0000 00012234899999999998 99999999862 357999999997
Q ss_pred hhhhc----cccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccce-eecCCcceeeeecCCC-----------
Q psy2118 170 QELRV----KTVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHI-EFSDNTLCLQLVEGKP----------- 233 (357)
Q Consensus 170 ~~l~~----~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i-~~~~n~~~~~ll~~~~----------- 233 (357)
+.... +.|+||||||||||||||++|++++|+.||++|++|||+|..+ .+.||.+|+++++++|
T Consensus 384 E~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~~~~~~~~~~~ 463 (767)
T cd01386 384 QNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQQVVVPAGLRA 463 (767)
T ss_pred cccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccccccccchhhc
Confidence 65321 2589999999999999999999999999999999999999754 3458899999999865
Q ss_pred ---CCCCCCcceeecCCCCC
Q psy2118 234 ---NGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 234 ---~G~~~dGH~a~~~P~~~ 250 (357)
.||..--.-.+.+|+.+
T Consensus 464 ~~~~GIl~lLDEec~~p~~t 483 (767)
T cd01386 464 EDARGLLWLLDEEALVPGSS 483 (767)
T ss_pred cCCCchhhhhhHhhcCCCCc
Confidence 48887555556678743
No 35
>PLN02360 probable 6-phosphogluconolactonase
Probab=99.92 E-value=6.2e-25 Score=204.11 Aligned_cols=108 Identities=24% Similarity=0.287 Sum_probs=89.6
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCC-CCccc-eEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEE
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSS-LASRT-RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILI 301 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~-~~~~~-~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~ 301 (357)
+.+|++ .+|||+||||||||||++ ++... +++.+ .+.+++|++|||||+++|++||+|+|++
T Consensus 149 p~fDlv---lLGmG~DGHtASlFPg~~~l~~~~~~v~~~-------------~~~~~~p~~RITlt~~~i~~A~~i~llv 212 (268)
T PLN02360 149 PKFDLI---LLGMGSDGHVASLFPNHPALEEKDDWVTFI-------------TDSPKPPPERITFTLPVINSASNVAVVA 212 (268)
T ss_pred CcccEE---EEccCCCCceeccCCCCchhhhccceEEee-------------cCCCCCCCceEEEcHHHHhcCCeEEEEE
Confidence 445555 459999999999999966 44443 33333 2457888999999999999999999999
Q ss_pred cCchHHHHHHHHHh----cCCCcccchhhhccCC-cEEEEeeHHHHhhhhh
Q psy2118 302 TGSHKAFALYKAVE----EGVNHMWTVSAFQMHP-CTIMICDEDATQELRV 347 (357)
Q Consensus 302 ~G~~Ka~~~~~~l~----~~~~~~~Pa~~~~~~~-~~~~~~D~~aa~~l~~ 347 (357)
+|++|+++|++++. ++++.++||+.++.|+ +++||+|++|++.|..
T Consensus 213 ~G~~Ka~al~~~l~~~~~~~~~~~~Pas~l~~~~~~~~w~~D~~Aa~~l~~ 263 (268)
T PLN02360 213 TGESKANAVHLAIDDVTEGPDAPSLPARMVQPTKGKLVWFLDKPAASKLDG 263 (268)
T ss_pred eCccHHHHHHHHHhhccCCCCcccCChhhhcCCCCcEEEEECHHHHhhCcc
Confidence 99999999999995 6666789999999986 9999999999998763
No 36
>KOG3147|consensus
Probab=99.91 E-value=4.8e-24 Score=188.68 Aligned_cols=118 Identities=25% Similarity=0.367 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHhC-C-----eeEEEEeecCCCcccccCCCCC-CC-CCceEEecchHHHHHHhcccCCCCCCCCccceec
Q psy2118 42 ECVQYEKDIKEAG-G-----IHLFVGGIGPDGHIAFNEPGSS-LA-SRTRLKTLAQETLEANARFFDNDIKKVPKEALTV 113 (357)
Q Consensus 42 ~~~~y~~~i~~~~-~-----~DlvllGiG~dGHiaf~~p~~~-~~-~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTl 113 (357)
++..|++.+.+.. + ||++|||||+||||||+||+.. .. ...+|+.++ +++++|++|||+
T Consensus 123 ~a~~ye~~l~~~v~~~s~p~FDL~LLG~GpDGHtaSLFP~~~~l~e~~~wV~~it-------------dSPkpPp~RITl 189 (252)
T KOG3147|consen 123 AADLYEKELKALVANDSFPVFDLLLLGMGPDGHTASLFPGHPLLNEKLKWVVPIT-------------DSPKPPPKRITL 189 (252)
T ss_pred HHHHHHHHHHHHhccCCCcceeEEEeccCCCCCeeecCCCchhhhcccCEEEEeC-------------CCCCCCCccEEE
Confidence 5678888887652 4 9999999999999999999944 22 223455544 789999999999
Q ss_pred chhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccc-cccceEEEeccchhhhhh
Q psy2118 114 GVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQ-MHPCTIMICDEDATQELR 173 (357)
Q Consensus 114 t~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~-~~~~~i~ilD~~a~~~l~ 173 (357)
|+++|+.|+.+.++++|+.|++++..++.... ..||++.++ ...+.+|++|++|+.++.
T Consensus 190 TLPvIn~A~~v~fvv~G~~Ka~iv~~i~~~~~-~~lPaa~V~~~~~~l~WflD~~A~~~l~ 249 (252)
T KOG3147|consen 190 TLPVINHAKNVAFVVCGASKAEIVKAILEDKE-KKLPAALVNPAKGKLVWFLDDDAASKLP 249 (252)
T ss_pred ehHHhhhhhceEEEEeCcchhHhHHHHHhccc-ccCCchheeccCCeEEEEEchHHhcCCC
Confidence 99999999999999999999999999998655 789999999 457799999999988763
No 37
>PRK00443 nagB glucosamine-6-phosphate deaminase; Provisional
Probab=99.90 E-value=3.6e-23 Score=192.09 Aligned_cols=173 Identities=57% Similarity=0.909 Sum_probs=145.8
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++.+|+|.+++++.+|++|.+.++.++..++...++|+++
T Consensus 1 m~~~~~~~~~~l~~~aa~~l~~~l~~~~~~~~~~~~iglsgG~T~~~~~~~L~~~~~~~~~~~~~v~v~~~DEr~gv~~~ 80 (261)
T PRK00443 1 MRLIILKTAEEVGKWAARHIANRINAFLPTKERPFVLGLATGSSPLETYKALIELHKAGKVDFSRVTTFNLDEYVGLPAD 80 (261)
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHHHhhccCCceEEEecCCCCHHHHHHHHHHHhhhcCCchHHeEEEeCceecCCCCC
Confidence 89999999999999999999999986443332222222111
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
++..|++.|...+++|++|+|||.|||++|+||++...+..++.
T Consensus 81 ~~~s~~~~~~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Dl~llGiG~dgh~aslfp~~~~~~~~~~~ 160 (261)
T PRK00443 81 HPESYRYFMRENFFDHVDIPPENINLLNGNAPDPEAECRRYEEKIKSAGGIDLQILGIGENGHIAFNEPGSSFASRTRIK 160 (261)
T ss_pred ChHHHHHHHHHHHhccCCCCHHHeecCCCCCcCHHHHHHHHHHHHHHcCCCCEEEEccCCCCcccccCCCCCCCCCeEEE
Confidence 56789999999999999999999999999999998777777777
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.+.+.......+++..+.+.+|..|||+|++.|.+++++++++.|++|++++..++.++.+..+|++.++.|++++|++|
T Consensus 161 ~l~~~~~~~~~~~~d~~g~~~~~~~itl~l~~L~~a~~vi~~a~G~~K~~ai~~al~~~~~~~~Pa~~l~~~~~~~~~~d 240 (261)
T PRK00443 161 TLTEDTRIANSRFFDGDIEQVPKYALTVGVGTILDAKEIMLLAPGHNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLD 240 (261)
T ss_pred EccHhhHHHHHhhcCCCccCCCCeeEEcCHHHHHhcCeEEEEecChHHHHHHHHHHhCCCCCCcchHHHhhCCCEEEEEc
Confidence 77776555556677766678889999999999999999999999999999999999987767899999998899999999
Q ss_pred cchhhhhh
Q psy2118 166 EDATQELR 173 (357)
Q Consensus 166 ~~a~~~l~ 173 (357)
..++..+.
T Consensus 241 ~~aa~~l~ 248 (261)
T PRK00443 241 EAAASELK 248 (261)
T ss_pred HHHHhHHH
Confidence 99987764
No 38
>PRK09762 galactosamine-6-phosphate isomerase; Provisional
Probab=99.90 E-value=6.5e-24 Score=193.24 Aligned_cols=103 Identities=26% Similarity=0.455 Sum_probs=90.0
Q ss_pred CCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKA 313 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~ 313 (357)
+|||+||||||||||+++...++.+.+++.+.... .+ ...+++|++|||||++.|++||+|+|+++|++|+++|+++
T Consensus 130 LGmG~DGH~A~n~P~~slfp~~~~~~l~~~~~~~~--~~-~~~~~~p~~riTlt~~~i~~A~~i~llv~G~~Ka~~l~~~ 206 (232)
T PRK09762 130 LGLGKNGHLGLNEPGESLQPACHISQLDARTQQHE--ML-KTAGRPVTRGITLGLKDILNAREVLLLVTGEGKQDATERF 206 (232)
T ss_pred EccCCCCceecCCCCCCCCCCceeeeccHhhhhhh--cc-CCCCCCCCccEEeCHHHHHhcCEEEEEEeCHHHHHHHHHH
Confidence 39999999999999988888888777766554322 23 2457889999999999999999999999999999999999
Q ss_pred HhcCCCcccchhhhccCCcEEEEeeH
Q psy2118 314 VEEGVNHMWTVSAFQMHPCTIMICDE 339 (357)
Q Consensus 314 l~~~~~~~~Pa~~~~~~~~~~~~~D~ 339 (357)
++++++.++||+++|.|+++++++|+
T Consensus 207 l~~~~~~~~Pas~l~~h~~~~~~~d~ 232 (232)
T PRK09762 207 LTAKVSTAIPASFLWLHSNFICLIDR 232 (232)
T ss_pred HcCCCCCcccHHHHhhCCCEEEEecC
Confidence 99988889999999999999999995
No 39
>PRK02122 glucosamine-6-phosphate deaminase-like protein; Validated
Probab=99.90 E-value=1.1e-23 Score=215.92 Aligned_cols=117 Identities=42% Similarity=0.596 Sum_probs=107.4
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-|| |||+||||||||||+++.+.++++.++..++..+...|. ..+.+|++|||||+++|++||+|+|+++|
T Consensus 159 ~DlvLL-----GiG~DGHiAsnfPgs~~~s~tr~v~l~~~tr~~aa~~f~-~~~~~P~~rITmgi~~I~~Ar~Iilla~G 232 (652)
T PRK02122 159 IDFQLL-----GIGRTGHIGFNEPGSGRNSRTRLVTLDHITRRDAASDFF-GEENVPRKAITMGVGTILKARRIVLLAWG 232 (652)
T ss_pred CcEEEe-----CCCCCCceeccCCCCcccccceEEEccchhhhhhccccC-CCCCCCCceEEeCHHHHHhhCeEEEEEeC
Confidence 455555 999999999999999998999999999888887777775 47889999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
++|+++|+++++|+++..+|||+|+.|++++||+|++||+.|+
T Consensus 233 ~~Ka~iv~~~l~g~~~~~~PAs~Lq~h~~~~~~lD~~AA~~Lt 275 (652)
T PRK02122 233 EHKAPIIKRAVEGEISDEVPASYLQEHPNATFVLDLAAASELT 275 (652)
T ss_pred HHHHHHHHHHHhCCCCCccchHHhccCCCEEEEEcHHHhhhcc
Confidence 9999999999999988899999999999999999999999885
No 40
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=99.90 E-value=9.7e-26 Score=235.55 Aligned_cols=198 Identities=32% Similarity=0.456 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHhCCee----------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAGGIH----------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~D----------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+.+.|++...++..++ -+|+||+|+|++.|....+. +.+ ..-+.+.+..+|.+||+++..+ ...+
T Consensus 233 d~~~f~~l~~al~~lg~~~~e~~~I~~iLaaILhLGni~F~~~~~~--~~~--~~~~~~~l~~~a~LLgv~~~~L-~~~l 307 (689)
T PF00063_consen 233 DAEEFQELKDALKTLGFSDEEIDDIFRILAAILHLGNIEFVEDESD--ESA--EVENSEELQKAAELLGVDSEEL-EKAL 307 (689)
T ss_dssp HHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHTTSSEEEETTS--SSE--EESTSHHHHHHHHHTTS-HHHH-HHHH
T ss_pred CHHHhhhhhhhhccccCchhHHHHHHHHHHHHhhhccccccccccc--cce--eechHHHHHHhhhhcCCCHHHH-HHHH
Confidence 4556665555543211 28899999999999655421 122 3335566889999999987776 4444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc--------ccceEEEeccchhhhhhccccch
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM--------HPCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~--------~~~~i~ilD~~a~~~l~~~~n~f 179 (357)
|. +.+...+.++...... ..+|+++|+||+++ |.|+|.+||. ....|++||.+|++. +..|+|
T Consensus 308 ~~--~~~~~~~e~~~~~~~~~~a~~~rdalak~LY~~L-F~wIV~~iN~~L~~~~~~~~~~IgILDi~GFE~--~~~N~f 382 (689)
T PF00063_consen 308 TT--RTIKVGGETVTKPLSVEQASDARDALAKALYSRL-FDWIVERINSALSPSESENSSSIGILDIFGFEN--FSVNSF 382 (689)
T ss_dssp HS--EEEESTTSEEEEE-BHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH--SS-S-SEEEEEEEEE-B-----SSB-H
T ss_pred hh--ccccccccccccccchhhhhhhhhhhhhhhhhHH-HHHHHHhhhhccccccccccccCcccCcccccc--cccccc
Confidence 44 3444344443333222 34799999999998 9999999986 135799999999765 488999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceee-cCCcceeeeecCCCCCCCCCcceeecCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGIGPDGHIAFNEPGS 249 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~-~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~ 249 (357)
|||||||||||||++|++++|+.|+++|.+|||.|..+.| .||.+|++||++++.||..--.-.+..|+.
T Consensus 383 EQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lLdee~~~~~~ 453 (689)
T PF00063_consen 383 EQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLLDEECLLPRG 453 (689)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHHHHHCTSTTS
T ss_pred ccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHhhhhhhcccc
Confidence 9999999999999999999999999999999999999999 899999999999999999833344556664
No 41
>PRK00443 nagB glucosamine-6-phosphate deaminase; Provisional
Probab=99.89 E-value=9.4e-23 Score=189.29 Aligned_cols=128 Identities=60% Similarity=0.922 Sum_probs=114.5
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+|||||++.+....+++.+.+.......++|+.+.+..|.+|||||++.|++|++++++++|
T Consensus 131 ~Dl~ll-----GiG~dgh~aslfp~~~~~~~~~~~~l~~~~~~~~~~~~d~~g~~~~~~~itl~l~~L~~a~~vi~~a~G 205 (261)
T PRK00443 131 IDLQIL-----GIGENGHIAFNEPGSSFASRTRIKTLTEDTRIANSRFFDGDIEQVPKYALTVGVGTILDAKEIMLLAPG 205 (261)
T ss_pred CCEEEE-----ccCCCCcccccCCCCCCCCCeEEEEccHhhHHHHHhhcCCCccCCCCeeEEcCHHHHHhcCeEEEEecC
Confidence 355555 999999999999998888888888887766555778887656788899999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhcccC
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKVR 356 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~~~ 356 (357)
++|+++++.++.++.++++|+++++.|++++||+|++|++.|+.++++||+-.
T Consensus 206 ~~K~~ai~~al~~~~~~~~Pa~~l~~~~~~~~~~d~~aa~~l~~~~~~~~~~~ 258 (261)
T PRK00443 206 HNKAEAVKAAVEGPVNHMWPASILQLHPKATLVLDEAAASELKVKTVKYFTEL 258 (261)
T ss_pred hHHHHHHHHHHhCCCCCCcchHHHhhCCCEEEEEcHHHHhHHHHHHHHHhhhc
Confidence 99999999999998878999999999999999999999999999999999754
No 42
>cd01400 6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.
Probab=99.89 E-value=5.7e-23 Score=185.67 Aligned_cols=147 Identities=24% Similarity=0.324 Sum_probs=116.1
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccc---cchHHHHHHHHHHHH----hCCeeEEEEeecCCCcccccCC
Q psy2118 2 RLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVL---GLPTECVQYEKDIKE----AGGIHLFVGGIGPDGHIAFNEP 74 (357)
Q Consensus 2 ~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~---gl~~~~~~y~~~i~~----~~~~DlvllGiG~dGHiaf~~p 74 (357)
|++..+|++++...+.+.+.+.+.. +....+.+. ....+|.+|++.|.+ .++||+++||||.|||||||||
T Consensus 61 r~Vp~~~~~Sn~~~~~~~ll~~~~~--~~~~v~~~~~~~~~~~~a~~y~~~i~~~~~~~~~~Dl~lLGmG~DGH~ASlfP 138 (219)
T cd01400 61 RCVPPDDPDSNYRLAREALLSHVAI--PAANIHPIPTELGPEDAAAAYEKELRALFGGVPPFDLVLLGMGPDGHTASLFP 138 (219)
T ss_pred cccCCCCcccHHHHHHHHhhccCCC--CHhhEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCEEEECCcCCCceeecCC
Confidence 3456778899999999999887754 333333332 245689999999998 5789999999999999999999
Q ss_pred CCCCC--CCce-EEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCccccee
Q psy2118 75 GSSLA--SRTR-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTV 151 (357)
Q Consensus 75 ~~~~~--~~~~-v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv 151 (357)
+++.. +.++ +..++ +++..|.+|||||++.|++|++++++++|++|++++++++.+..+.++|+
T Consensus 139 ~~~~~~~~~~~~v~~~~-------------~~~~~p~~RiTlt~~~i~~a~~i~ll~~G~~K~~~l~~~l~~~~~~~~Pa 205 (219)
T cd01400 139 GHPALLEETDRLVVAVT-------------DSPKPPPERITLTLPVLNNARRVVFLVTGAEKAEALKRALAGPDPEELPA 205 (219)
T ss_pred CCcccccccCceEEEEe-------------CCCCCCCccEEecHHHHhcCCeEEEEEeChhHHHHHHHHHcCCCCCCCCh
Confidence 98754 3332 33221 23457889999999999999999999999999999999999876578999
Q ss_pred cccccc-cceEEE
Q psy2118 152 SAFQMH-PCTIMI 163 (357)
Q Consensus 152 ~~l~~~-~~~i~i 163 (357)
+.++.+ .++.|+
T Consensus 206 s~l~~~~~~~~w~ 218 (219)
T cd01400 206 ARVLPRPGEVLWF 218 (219)
T ss_pred hhhcCCCCcEEEe
Confidence 999887 456665
No 43
>cd01400 6PGL 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate. 6PGL is thought to guard against the accumulation of the delta form of the lactone, which may be toxic through its reaction with endogenous cellular nucleophiles.
Probab=99.88 E-value=3.1e-22 Score=180.92 Aligned_cols=92 Identities=28% Similarity=0.380 Sum_probs=78.4
Q ss_pred CCCCCCCcceeecCCCCCCC--ccce-EEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHH
Q psy2118 233 PNGIGPDGHIAFNEPGSSLA--SRTR-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFA 309 (357)
Q Consensus 233 ~~G~~~dGH~a~~~P~~~~~--~~~~-~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~ 309 (357)
.+|||+||||||||||++.. +.++ ++.+ .+.+++|++|||||++.|++||+|+|+++|++|+++
T Consensus 124 lLGmG~DGH~ASlfP~~~~~~~~~~~~v~~~-------------~~~~~~p~~RiTlt~~~i~~a~~i~ll~~G~~K~~~ 190 (219)
T cd01400 124 LLGMGPDGHTASLFPGHPALLEETDRLVVAV-------------TDSPKPPPERITLTLPVLNNARRVVFLVTGAEKAEA 190 (219)
T ss_pred EECCcCCCceeecCCCCcccccccCceEEEE-------------eCCCCCCCccEEecHHHHhcCCeEEEEEeChhHHHH
Confidence 33999999999999998764 4454 3343 134568899999999999999999999999999999
Q ss_pred HHHHHhcCCCcccchhhhccCC-cEEEEe
Q psy2118 310 LYKAVEEGVNHMWTVSAFQMHP-CTIMIC 337 (357)
Q Consensus 310 ~~~~l~~~~~~~~Pa~~~~~~~-~~~~~~ 337 (357)
++++++++++.++|++.++.|+ +++||.
T Consensus 191 l~~~l~~~~~~~~Pas~l~~~~~~~~w~~ 219 (219)
T cd01400 191 LKRALAGPDPEELPAARVLPRPGEVLWFL 219 (219)
T ss_pred HHHHHcCCCCCCCChhhhcCCCCcEEEeC
Confidence 9999999877899999999984 788873
No 44
>cd01399 GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.
Probab=99.84 E-value=1.7e-20 Score=171.08 Aligned_cols=116 Identities=53% Similarity=0.807 Sum_probs=101.3
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+|||||++.+..++.+..+.+.......++|+.+ +..|.+|||||++.|++|++++++++|
T Consensus 117 ~Dl~ll-----GiG~dgh~as~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~itltl~~l~~a~~vi~~a~G 190 (232)
T cd01399 117 IDLQLL-----GIGENGHIGFNEPGSSLDSRTRVVTLDESTRQANARFFDGD-EDVPTQAITMGIGTIMKAKEILLLATG 190 (232)
T ss_pred CCEEEE-----CCCCCceeeecCCCCCCCCceEEEECCHHhHHHHhhhcCCc-CCCCCceEecCHHHHhhCCEEEEEeCC
Confidence 355566 99999999999999887777777777766655666777644 678899999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
++|+++++.++.++.+.++|++.++.|++++||+|++||+.|
T Consensus 191 ~~K~~ai~~al~~~~~~~~P~~~l~~~~~~~~~~d~~aa~~~ 232 (232)
T cd01399 191 EGKAEAVKKALEGPVTEECPASILQLHPNVTVILDEAAASEL 232 (232)
T ss_pred hHHHHHHHHHHhCCCCCCcchHHHhhCCCeEEEEcHHHhccC
Confidence 999999999999988779999999999999999999999754
No 45
>KOG0160|consensus
Probab=99.84 E-value=4.7e-22 Score=204.57 Aligned_cols=178 Identities=34% Similarity=0.416 Sum_probs=140.8
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEee-CCc--hh-H
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILI-TGS--HK-A 134 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~-~G~--~K-a 134 (357)
+++|+++.|++.|.--... +.....+. .+..++.++|.+.+.+ .-++....|..++..+.-. ++. .+ +
T Consensus 265 lla~ilhlGni~f~~~~~~----~~~~~~~~-~~~~~a~Llg~~~~~l---~~~L~~r~i~~~~e~i~k~l~~~qa~~~r 336 (862)
T KOG0160|consen 265 LLAAILHLGNIQFSSGVEE----TSSSPVDD-HLWTAAELLGCDEEAL---EQWLSKRKILTARESIVKPLTLSQAVKRR 336 (862)
T ss_pred HHHHHhccCceEeeccccc----ccccccch-HHHHHHHHhCCCHHHH---HHHHHHHHhhcccceeecccCHHHHHHhh
Confidence 6889999999998422111 11111121 5566778999887776 5556666777777655533 222 23 6
Q ss_pred HHHHHHHhcCCcccceecccccc--------cceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhHHH
Q psy2118 135 FALYKAVEEGVNHMWTVSAFQMH--------PCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQEE 206 (357)
Q Consensus 135 dal~k~l~~~~~~~~pv~~l~~~--------~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~ 206 (357)
|+++|.+|+.+ |+|.|..+|.. ..+|++||+++++ +|+.|+||||||||+||+|||.|++|+|+.||++
T Consensus 337 D~lak~iys~L-FdwlV~~in~sL~~~~~~~~~~igVLDiYgFE--sF~~nsfeQfcINyanEkLqq~fnqHvfk~Eqee 413 (862)
T KOG0160|consen 337 DALAKQLYSLL-FDWLVAKINGSLGANDPKAERFIGVLDIYGFE--SFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEE 413 (862)
T ss_pred hhhHHHHHHHH-HHHHHHHhhcccccCCCCccceeeeehccccc--ccccCcHHHhhhhhHHHHhhHHHHHHHHHHHHHH
Confidence 99999999988 99999999862 3589999999976 4899999999999999999999999999999999
Q ss_pred HHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCC
Q psy2118 207 YNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPG 248 (357)
Q Consensus 207 y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~ 248 (357)
|.+|+|+|..++|.||++|++++++ +.|+.+----.+.+|.
T Consensus 414 y~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Llde~c~lp~ 454 (862)
T KOG0160|consen 414 YTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLDEECMLPK 454 (862)
T ss_pred HHhhccccccccCcCccchhhhhcc-ccchhhccchhccCCC
Confidence 9999999999999999999999998 8899985555666665
No 46
>cd01399 GlcN6P_deaminase GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium. The reaction is an aldo-keto isomerization coupled with an amination or deamination. It is the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate (GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that is allosterically activated by GlcNAc6P.
Probab=99.82 E-value=6.5e-20 Score=167.19 Aligned_cols=162 Identities=45% Similarity=0.655 Sum_probs=129.8
Q ss_pred CCHHHHHHHHHHHHHHHHhccCCCCCcccccc----chHHHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCc
Q psy2118 7 DDVSNVAEWSARYVLKKITDFKPGPDNYFVLG----LPTECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRT 82 (357)
Q Consensus 7 ~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~g----l~~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~ 82 (357)
++.+.....+.+.+.+.+.. +....+...+ ...++..|++.|...+++|++++|||.|||++|+||++...+..
T Consensus 66 ~~~~sn~~~~~~~l~~~~~~--~~~~i~~p~~~~~~~~~~~~~~~~~l~~~~~~Dl~llGiG~dgh~as~~p~~~~~~~~ 143 (232)
T cd01399 66 DHPQSYHYFMRENLFDHIDI--KPENIHIPDGNAADLEAECRRYEALIAEAGGIDLQLLGIGENGHIGFNEPGSSLDSRT 143 (232)
T ss_pred CcchhHHHHHHHHhhccCCC--CHHHEecCCCCccCHHHHHHHHHHHHHHcCCCCEEEECCCCCceeeecCCCCCCCCce
Confidence 45667777777777776532 2212222222 23378899999999999999999999999999999998776667
Q ss_pred eEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEE
Q psy2118 83 RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIM 162 (357)
Q Consensus 83 ~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ 162 (357)
.+..+.+.......+.+..+ +.+|.+|||+|++.|.+++++++++.|++|++++..++.++.+..+|++.++.|++++|
T Consensus 144 ~~~~l~~~~~~~~~~~~~~~-~~~~~~~itltl~~l~~a~~vi~~a~G~~K~~ai~~al~~~~~~~~P~~~l~~~~~~~~ 222 (232)
T cd01399 144 RVVTLDESTRQANARFFDGD-EDVPTQAITMGIGTIMKAKEILLLATGEGKAEAVKKALEGPVTEECPASILQLHPNVTV 222 (232)
T ss_pred EEEECCHHhHHHHhhhcCCc-CCCCCceEecCHHHHhhCCEEEEEeCChHHHHHHHHHHhCCCCCCcchHHHhhCCCeEE
Confidence 77777766655555666654 67889999999999999999999999999999999999987767899999999999999
Q ss_pred Eeccchhhh
Q psy2118 163 ICDEDATQE 171 (357)
Q Consensus 163 ilD~~a~~~ 171 (357)
++|+.++.+
T Consensus 223 ~~d~~aa~~ 231 (232)
T cd01399 223 ILDEAAASE 231 (232)
T ss_pred EEcHHHhcc
Confidence 999987653
No 47
>PF01182 Glucosamine_iso: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; InterPro: IPR006148 This domain is characteristic of the enzymes 6-phosphogluconolactonase (3.1.1.31 from EC), Glucosamine-6-phosphate isomerase (3.5.99.6 from EC), and Galactosamine-6-phosphate isomerase. 6-Phosphogluconolactonase is the enzyme responsible for the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate, the second step in the pentose phosphate pathway. Glucosamine-6-phosphate isomerase (or Glucosamine 6-phosphate deaminase) is the enzyme responsible for the conversion of D-glucosamine 6-phosphate into D-fructose 6-phosphate []. It is the last specific step in the pathway for N-acetylglucosamine (GlcNAC) utilization in bacteria such as Escherichia coli (gene nagB) or in fungi such as Candida albicans (gene NAG1).; GO: 0005975 carbohydrate metabolic process; PDB: 3CSS_A 3CH7_A 1Y89_B 3TX2_A 2BKX_B 2BKV_B 3E15_B 1HOR_B 1JT9_A 1HOT_A ....
Probab=99.81 E-value=4.4e-20 Score=164.46 Aligned_cols=123 Identities=27% Similarity=0.372 Sum_probs=87.9
Q ss_pred EcCCHHHHHHHHHHHHHHHHhccCCCCCcccccc----chHHHHHHHHHHHHhCC------eeEEEEeecCCCcccccCC
Q psy2118 5 ILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLG----LPTECVQYEKDIKEAGG------IHLFVGGIGPDGHIAFNEP 74 (357)
Q Consensus 5 ~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~g----l~~~~~~y~~~i~~~~~------~DlvllGiG~dGHiaf~~p 74 (357)
..++++++...+.+.+.+.+.. +..+.+.+.+ ...+|.+|++.|.+.++ ||+++||||.|||||||||
T Consensus 64 ~~~~~~Sn~~~~~~~l~~~~~i--~~~~i~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~p~~Dl~lLG~G~DGH~aslfP 141 (199)
T PF01182_consen 64 PPDDPDSNYRMLREHLLDPLPI--PPENIHPIDGEADDPEEAAERYEQELASLGGEAGFPGFDLVLLGMGEDGHTASLFP 141 (199)
T ss_dssp TTTSTTSHHHHHHHHTGGGSGG--GGGGEETSSTTTSSHHHHHHHHHHHHHHHSSSEECESBSEEEEE--TTS-BTTB-T
T ss_pred CCCCCccHHHHHHHHhhccCCC--CcceEEeCCCCCCCHHHHHHHHHHHHHHhccccCCCceeEEEeccccCCCeeccCC
Confidence 3467777788877777776642 2222222222 34589999999999975 9999999999999999999
Q ss_pred CCCCCC---CceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHh
Q psy2118 75 GSSLAS---RTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE 142 (357)
Q Consensus 75 ~~~~~~---~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~ 142 (357)
++.... ...+.. +. +.+..|.+|||||++.|++|++++++++|++|++++++++.
T Consensus 142 g~~~~~~~~~~~~~~------------~~-~~~~~p~~riTlt~~~i~~a~~i~~l~~G~~Ka~~v~~~l~ 199 (199)
T PF01182_consen 142 GSPALLEESERWVVA------------VT-DSPKPPPQRITLTLPTIMSARKIVLLATGEEKAEAVKRALQ 199 (199)
T ss_dssp TCHTTHHHHSSSSEE------------EE-CCTTSSSEEEEE-HHHHHTSSEEEEEEESGGGHHHHHHHH-
T ss_pred CCccccccccceEEE------------ec-CCCCCCcceEEeCHHHHHhcCEEEEEEeCHHHHHHHHHHhC
Confidence 976422 111111 11 35778899999999999999999999999999999999873
No 48
>KOG0161|consensus
Probab=99.79 E-value=9.3e-22 Score=216.09 Aligned_cols=226 Identities=27% Similarity=0.384 Sum_probs=153.0
Q ss_pred EEEeecCCCcccccC-CCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCch-----
Q psy2118 59 FVGGIGPDGHIAFNE-PGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSH----- 132 (357)
Q Consensus 59 vllGiG~dGHiaf~~-p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~----- 132 (357)
++++|+|.|++.|-- |++. .+.+ .+......++.++|++.... ..+++. |.|-..+ -+ +..|..
T Consensus 345 i~sailhlGn~~f~~~~~~~---qa~~--~~~~~a~ka~~llg~~~~~~-~~al~~--priKvg~-e~-v~k~q~~~q~~ 414 (1930)
T KOG0161|consen 345 IVSAILHLGNIKFKQEPREE---QAEF--DNTEVADKACHLLGINVEEF-LKALLR--PRIKVGR-EW-VSKAQNVEQVL 414 (1930)
T ss_pred HHHHHHHhcchhhhcccccc---ccCC--CCchHHHHHHHHcCCCHHHH-HHHhcc--cceeccc-hh-hhhcchHHHHH
Confidence 788999999999953 2221 1111 12234455677888776554 222211 2221111 11 111111
Q ss_pred -hHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhH
Q psy2118 133 -KAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQ 204 (357)
Q Consensus 133 -Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~ 204 (357)
--.++++++|.++ |.|.|.++|. ...+|+++|++| |+| |..|||||+||||+||+||||||+++|-.||
T Consensus 415 ~~v~alAk~lYerl-F~wlV~riN~sld~~~~~~~fIgvLDiaG-FEI-fe~nSFEQLciNytnEkLQqfFnh~mFvlEq 491 (1930)
T KOG0161|consen 415 FAVEALAKALYERL-FGWLVKRINKSLDSKQQRDYFIGVLDIAG-FEI-FEFNSFEQLCINYTNEKLQQFFNHHMFVLEQ 491 (1930)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHhhhccccCCcceeeeecc-ccc-cCcCCHHHHHHHHHHHHHHhhhcchhhhhhH
Confidence 1379999999998 9999999985 346899999977 555 5779999999999999999999999999999
Q ss_pred HHHHHcCCcccceeec-CCcceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCce
Q psy2118 205 EEYNKEGIRWRHIEFS-DNTLCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEA 283 (357)
Q Consensus 205 ~~y~~Egi~~~~i~~~-~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~r 283 (357)
++|.+|||.|..|+|. |-+||++||+++. ||..--.--++||++. +.+.+.++.........+|-. |+ ..+
T Consensus 492 eeY~~EgIew~fidfG~Dlq~~idLIEkp~-Gi~slLdEEc~~PkAt--d~tf~~kL~~~~~gk~~~f~~---~k--~~~ 563 (1930)
T KOG0161|consen 492 EEYQREGIEWDFIDFGLDLQPTIDLIEKPM-GILSLLDEECVVPKAT--DKTFLEKLCDQHLGKHPKFQK---PK--GKK 563 (1930)
T ss_pred HHHHHhCCceeeeccccchhhhHHHHhchh-hHHHHHHHHHhcCCCc--cchHHHHHHHHhhccCccccC---cc--ccc
Confidence 9999999999999998 6789999998755 8887555556789865 333333332222122222211 11 336
Q ss_pred EEeCHHHHhccceEEEEEcCch
Q psy2118 284 LTVGVGTVMDAQEVMILITGSH 305 (357)
Q Consensus 284 iTlt~~~i~~a~~v~~~~~G~~ 305 (357)
..-.+..++.|-.|-+-+.|--
T Consensus 564 ~~~~F~l~HyaG~V~Y~~~~WL 585 (1930)
T KOG0161|consen 564 AEAHFALVHYAGTVDYNVDGWL 585 (1930)
T ss_pred chhhhheeeecceeccCccchh
Confidence 6777777888888888887743
No 49
>PF01182 Glucosamine_iso: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; InterPro: IPR006148 This domain is characteristic of the enzymes 6-phosphogluconolactonase (3.1.1.31 from EC), Glucosamine-6-phosphate isomerase (3.5.99.6 from EC), and Galactosamine-6-phosphate isomerase. 6-Phosphogluconolactonase is the enzyme responsible for the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate, the second step in the pentose phosphate pathway. Glucosamine-6-phosphate isomerase (or Glucosamine 6-phosphate deaminase) is the enzyme responsible for the conversion of D-glucosamine 6-phosphate into D-fructose 6-phosphate []. It is the last specific step in the pathway for N-acetylglucosamine (GlcNAC) utilization in bacteria such as Escherichia coli (gene nagB) or in fungi such as Candida albicans (gene NAG1).; GO: 0005975 carbohydrate metabolic process; PDB: 3CSS_A 3CH7_A 1Y89_B 3TX2_A 2BKX_B 2BKV_B 3E15_B 1HOR_B 1JT9_A 1HOT_A ....
Probab=99.75 E-value=1.7e-18 Score=154.29 Aligned_cols=96 Identities=29% Similarity=0.361 Sum_probs=64.0
Q ss_pred hhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCCCCc---cceEEecchHHHHHhhhccCCCCC
Q psy2118 201 QYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSSLAS---RTRLKTLAQETLEANARFFDNDIK 277 (357)
Q Consensus 201 ~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~---~~~~~~~~~~~~~~~~~~f~~~~~ 277 (357)
..+.+.|+++--....-.. .|.+|++ .+|||+|||+||||||++... ..+++.+ .+.+
T Consensus 101 ~~~~~~y~~~l~~~~~~~~---~p~~Dl~---lLG~G~DGH~aslfPg~~~~~~~~~~~~~~~-------------~~~~ 161 (199)
T PF01182_consen 101 EEAAERYEQELASLGGEAG---FPGFDLV---LLGMGEDGHTASLFPGSPALLEESERWVVAV-------------TDSP 161 (199)
T ss_dssp HHHHHHHHHHHHHHSSSEE---CESBSEE---EEE--TTS-BTTB-TTCHTTHHHHSSSSEEE-------------ECCT
T ss_pred HHHHHHHHHHHHHhccccC---CCceeEE---EeccccCCCeeccCCCCccccccccceEEEe-------------cCCC
Confidence 3556777766432211000 2345554 449999999999999977522 1222232 2458
Q ss_pred CCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHHHh
Q psy2118 278 KVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE 315 (357)
Q Consensus 278 ~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~ 315 (357)
++|++|||||++.|++||+|+|+++|++|+++|+++|+
T Consensus 162 ~~p~~riTlt~~~i~~a~~i~~l~~G~~Ka~~v~~~l~ 199 (199)
T PF01182_consen 162 KPPPQRITLTLPTIMSARKIVLLATGEEKAEAVKRALQ 199 (199)
T ss_dssp TSSSEEEEE-HHHHHTSSEEEEEEESGGGHHHHHHHH-
T ss_pred CCCcceEEeCHHHHHhcCEEEEEEeCHHHHHHHHHHhC
Confidence 89999999999999999999999999999999999985
No 50
>KOG4229|consensus
Probab=99.74 E-value=2.3e-19 Score=189.12 Aligned_cols=184 Identities=33% Similarity=0.416 Sum_probs=137.0
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeC---CchhHH
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILIT---GSHKAF 135 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~---G~~Kad 135 (357)
++.|++++|++.+.--.....+.+. ..+...+..++.++..+...+ .+.+|.-. .++....++.-.+ ..+-+|
T Consensus 320 ~la~il~~gni~~~~~~~~~~d~~~--v~~~~~v~~vA~lL~~~~~~l-~~alt~~~-~~~~ge~~~~~l~~~~A~d~rd 395 (1062)
T KOG4229|consen 320 SLAAILHIGNISYIKFALDQQDSAE--VENEEAVERVACLLLIKEKLL-QEALTARV-NVTRGELLLAPLLVERAVDVRD 395 (1062)
T ss_pred hcccceeecceeHHhhhcccccchh--cccchHHHHHHHHhhcCHHHh-hhhhcccc-eeeehhhhhhhhhHHHhccCch
Confidence 8899999999999643222222222 335556666776666555444 33333321 1111111221111 123479
Q ss_pred HHHHHHhcCCcccceecccccc---------cceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhHHH
Q psy2118 136 ALYKAVEEGVNHMWTVSAFQMH---------PCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQEE 206 (357)
Q Consensus 136 al~k~l~~~~~~~~pv~~l~~~---------~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~ 206 (357)
+++|.+|+.+ |.|++.+||.. ...|+++|.+|++.+ ..|+|||+|||+|||++|+||++|+|..|+++
T Consensus 396 a~ak~ly~~l-f~~iv~rIn~~~~~~~~~~~~~~IgiLdiFgfE~f--~~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~e 472 (1062)
T KOG4229|consen 396 AMAKTLYGRL-FDWIVLRINAALSPESDISDILSIGILDIFGFENF--ERNSFEQLCINLANEQLQYYFNQHIFALEQEE 472 (1062)
T ss_pred HHHHHHHHHH-HHHHHhhHHhccCccccccccceeehhhhhcccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999988 99999999862 246899999998764 78999999999999999999999999999999
Q ss_pred HHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCC
Q psy2118 207 YNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGS 249 (357)
Q Consensus 207 y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~ 249 (357)
|..|+|+|..+.|.||..++++|..+|.|+..-=..-+.||+.
T Consensus 473 y~~e~I~w~~i~~~dN~~~ldli~~kp~gil~liDees~fP~~ 515 (1062)
T KOG4229|consen 473 YDNESIDWRNIEFADNRRRLDLISPKPMGILSLIDEESRFPKA 515 (1062)
T ss_pred hhhcCCCeeeeeeeeccchhhhhccCccchhheecccCcCCch
Confidence 9999999999999999999999999999998844478888873
No 51
>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.
Probab=99.04 E-value=4.8e-10 Score=97.32 Aligned_cols=107 Identities=22% Similarity=0.299 Sum_probs=81.1
Q ss_pred EEEEcCCHHHHHHHHHHHHHHHHhccCCCCCcccccc---chHHHHHHH-HHHHHhCCeeEEEEeecCCCcccccCCCCC
Q psy2118 2 RLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLG---LPTECVQYE-KDIKEAGGIHLFVGGIGPDGHIAFNEPGSS 77 (357)
Q Consensus 2 ~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~g---l~~~~~~y~-~~i~~~~~~DlvllGiG~dGHiaf~~p~~~ 77 (357)
|++..+|++++...+.+.+.+.+.. +....+.+.+ ...++.+|. +.+..+++||++|+|||
T Consensus 59 r~v~~~~~~Sn~~~~~~~ll~~~~i--~~~~v~~~~~~~~~~~~a~~y~~~~~~~~~~~Dl~lLG~G------------- 123 (169)
T cd00458 59 RYVPLDSDQSNFRQAKLLAFEHDII--PASNVHYVDTSLPIEKACEKYEREILDQVDAIDLAVDGAG------------- 123 (169)
T ss_pred ccCCCCCchHHHHHHHHHhhccCCC--CHHHeecCCCCCCcHHHHHHHHHHHHhhCCCCCEEEECcC-------------
Confidence 3455678889998988888876542 3333333322 233444454 46677788999999999
Q ss_pred CCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccc
Q psy2118 78 LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMH 157 (357)
Q Consensus 78 ~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~ 157 (357)
+.|++++++++|+.|+++|.+++.+..+..+|++.++.|
T Consensus 124 -----------------------------------------~~a~~i~~~~~G~~Ka~~l~~~~~~~~~~~~Pas~l~~~ 162 (169)
T cd00458 124 -----------------------------------------YRAGTVIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGK 162 (169)
T ss_pred -----------------------------------------ccccEEEEEecChhHHHHHHHHhcCCCCCcCCHHHhccC
Confidence 778999999999999999999998766568999999999
Q ss_pred cceEEEe
Q psy2118 158 PCTIMIC 164 (357)
Q Consensus 158 ~~~i~il 164 (357)
++++|++
T Consensus 163 ~~~~~~~ 169 (169)
T cd00458 163 EKDIVIV 169 (169)
T ss_pred CCeEEeC
Confidence 8888875
No 52
>cd00458 SugarP_isomerase SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate, the first step of the non-oxidative branch of the pentose phosphate pathway. GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium, the last step of the metabolic pathway of N-acetyl-D-glucosamine-6-phosphate. 6PGL converts 6-phosphoglucono-1,5-lactone to 6-phosphogluconate, the second step of the oxidative phase of the pentose phosphate pathway.
Probab=98.54 E-value=9e-08 Score=83.06 Aligned_cols=53 Identities=25% Similarity=0.278 Sum_probs=47.2
Q ss_pred eEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEe
Q psy2118 283 ALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMIC 337 (357)
Q Consensus 283 riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~ 337 (357)
-+=||+. ++||+++|+++|++|+++|+++++++++.++||+.++.|++++||+
T Consensus 117 l~lLG~G--~~a~~i~~~~~G~~Ka~~l~~~~~~~~~~~~Pas~l~~~~~~~~~~ 169 (169)
T cd00458 117 LAVDGAG--YRAGTVIVLVDGRKKVDYLCQNTEPGVIENGIFADIRGKEKDIVIV 169 (169)
T ss_pred EEEECcC--ccccEEEEEecChhHHHHHHHHhcCCCCCcCCHHHhccCCCeEEeC
Confidence 3445555 8999999999999999999999999888899999999999999985
No 53
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=91.69 E-value=0.49 Score=45.19 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=44.9
Q ss_pred CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 281 KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 281 ~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
.+-|.++++.|-+..+++.+|-|+.|++++..+|.|..- -++++|+.+|..|
T Consensus 265 ~r~igl~L~~l~~ip~vI~vAgG~~K~~AI~aaL~gg~~-------------n~LITDe~tA~~l 316 (321)
T COG2390 265 DRVIGLSLDDLRQIPKVIAVAGGESKAEAILAALRGGYI-------------NVLITDEATAEAL 316 (321)
T ss_pred CceecCCHHHHhcCCcEEEEeCCcccHHHHHHHHhCCCC-------------CEEEeCHHHHHHH
Confidence 467899999999999999999999999999999998632 2456899988765
No 54
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=90.27 E-value=0.75 Score=42.52 Aligned_cols=52 Identities=21% Similarity=0.360 Sum_probs=41.4
Q ss_pred CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 281 KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 281 ~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
.+.|.+++..|.+.++++.++.|.+|+++++.+|.+..- + ++++|++.|..|
T Consensus 202 ~r~igi~l~~L~~i~~~I~va~G~~K~~aI~aALr~g~i------------~-~LItDe~tA~~l 253 (255)
T PF04198_consen 202 DRTIGISLEDLRKIPRVIAVAGGEEKAEAILAALRGGYI------------N-VLITDESTARAL 253 (255)
T ss_dssp GGBSB--HHHHHTSSEEEEEE-SGGGHHHHHHHHHTTST------------S-EEEEEHHHHHHH
T ss_pred CceeecCHHHHhCCCcEEEEcCchhhHHHHHHHHhcCCC------------C-EEEECHHHHHHH
Confidence 357899999999999999999999999999999998521 2 456899988765
No 55
>PRK15418 transcriptional regulator LsrR; Provisional
Probab=88.19 E-value=1.1 Score=42.84 Aligned_cols=52 Identities=19% Similarity=0.316 Sum_probs=44.3
Q ss_pred CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 281 KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 281 ~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
.+.|.+++..+.+.++++.+|.|.+|+++++.+|.|..- -++++|+++|..|
T Consensus 262 ~r~igi~le~Lk~ip~~I~vA~G~~K~~Ai~aALrgg~i-------------~~LITDe~tA~~l 313 (318)
T PRK15418 262 NELIGLPLSSLKTIPTVIGVAGGEEKAEAIIAALKGGYI-------------NALVTDEKTARAI 313 (318)
T ss_pred cceecCCHHHHcCCCCEEEEecCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence 347899999999999999999999999999999998521 2456899988865
No 56
>PF04198 Sugar-bind: Putative sugar-binding domain; InterPro: IPR007324 This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. One of these proteins, Q8U7I7 from SWISSPROT, has an N-terminal helix-turn-helix IPR000792 from INTERPRO that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.; GO: 0030246 carbohydrate binding; PDB: 3KV1_A 3EFB_C 2W48_A 3BXH_A 3BXE_A 2OKG_A 3BXF_A 3BXG_A 2R5F_A 2O0M_A ....
Probab=80.69 E-value=3.5 Score=38.06 Aligned_cols=105 Identities=21% Similarity=0.305 Sum_probs=63.3
Q ss_pred HHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHH----------hcccCCCCC----CCCccc
Q psy2118 45 QYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEAN----------ARFFDNDIK----KVPKEA 110 (357)
Q Consensus 45 ~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~----------a~~l~~~~~----~~p~~r 110 (357)
.+.+.+......|+++.|||.-..-...+...-+ +++.+... .++|..+-. ......
T Consensus 134 ~i~~~l~~~~~~dial~giG~~~~~~~~~~~~~~---------~~~~~~~l~~~gAVGdi~~~f~d~~G~~v~~~~~~r~ 204 (255)
T PF04198_consen 134 SIREVLDLARKADIALVGIGSPSSDSTLYRSGYL---------SEEEIEELREKGAVGDICGRFFDADGNIVDTPLNDRT 204 (255)
T ss_dssp HHHHHHHHHCT-SEEEEEEEEHHHHHHHCHHTTS---------CHHHHHHHHHTTEEEEETTEEEETTS-EEEHGGGGGB
T ss_pred HHHHHHHHHHhCCEEEEecCCCCCcchHHHhCCC---------CHHHHHHHHHCCcEEEhhchhhcCCCCCccCcCcCce
Confidence 3555666667799999999987664433211111 11111110 122322211 223557
Q ss_pred eecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhh
Q psy2118 111 LTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 111 iTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~ 171 (357)
+.+++..+.+.++++.++.|.+|.+++..+|.++. . .+.++|+..+..
T Consensus 205 igi~l~~L~~i~~~I~va~G~~K~~aI~aALr~g~-i------------~~LItDe~tA~~ 252 (255)
T PF04198_consen 205 IGISLEDLRKIPRVIAVAGGEEKAEAILAALRGGY-I------------NVLITDESTARA 252 (255)
T ss_dssp SB--HHHHHTSSEEEEEE-SGGGHHHHHHHHHTTS-T------------SEEEEEHHHHHH
T ss_pred eecCHHHHhCCCcEEEEcCchhhHHHHHHHHhcCC-C------------CEEEECHHHHHH
Confidence 88889999999999999999999999999999875 2 255677766554
No 57
>PRK15418 transcriptional regulator LsrR; Provisional
Probab=79.34 E-value=8.1 Score=36.95 Aligned_cols=51 Identities=20% Similarity=0.321 Sum_probs=41.7
Q ss_pred cceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 109 EALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 109 ~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
..+.+++..+.+.+.++.++.|.+|++++..++.++. . ...++|+..+..+
T Consensus 263 r~igi~le~Lk~ip~~I~vA~G~~K~~Ai~aALrgg~-i------------~~LITDe~tA~~l 313 (318)
T PRK15418 263 ELIGLPLSSLKTIPTVIGVAGGEEKAEAIIAALKGGY-I------------NALVTDEKTARAI 313 (318)
T ss_pred ceecCCHHHHcCCCCEEEEecCHHHHHHHHHHHhcCC-C------------CEEEECHHHHHHH
Confidence 4678888999999999999999999999999999875 2 2457788766543
No 58
>COG2390 DeoR Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]
Probab=79.02 E-value=2.5 Score=40.41 Aligned_cols=51 Identities=20% Similarity=0.362 Sum_probs=42.4
Q ss_pred ccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhh
Q psy2118 108 KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 108 ~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~ 171 (357)
..-+++++..+...++++.++.|+.|.+++..+|.++. -.+.+.|+..+..
T Consensus 265 ~r~igl~L~~l~~ip~vI~vAgG~~K~~AI~aaL~gg~-------------~n~LITDe~tA~~ 315 (321)
T COG2390 265 DRVIGLSLDDLRQIPKVIAVAGGESKAEAILAALRGGY-------------INVLITDEATAEA 315 (321)
T ss_pred CceecCCHHHHhcCCcEEEEeCCcccHHHHHHHHhCCC-------------CCEEEeCHHHHHH
Confidence 45788899999999999999999999999999999765 1356778776654
No 59
>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=39.09 E-value=49 Score=32.63 Aligned_cols=89 Identities=22% Similarity=0.305 Sum_probs=57.9
Q ss_pred hHHHHHHHHhcCCcccceecccccccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCC
Q psy2118 133 KAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGI 212 (357)
Q Consensus 133 Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi 212 (357)
|...+++++|.... ...+.+.+...++-.+...|.|----|-++||- .-.|.+-||
T Consensus 186 ~~~e~a~~lY~~iv-----------~~~~~vts~~tAEm~Kl~EN~fRdVNIALaNEl-------------ali~~~~GI 241 (436)
T COG0677 186 KCAELAAALYKTIV-----------EGVIPVTSARTAEMVKLTENTFRDVNIALANEL-------------ALICNAMGI 241 (436)
T ss_pred HHHHHHHHHHHHhe-----------EEEEEcCChHHHHHHHHHhhhhhHHHHHHHHHH-------------HHHHHHhCC
Confidence 46778888886431 113333444455544556788888888888863 456677788
Q ss_pred c-ccceeecCCcceeeeecCCCCCCCCCcceeecCCC
Q psy2118 213 R-WRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPG 248 (357)
Q Consensus 213 ~-~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~ 248 (357)
+ |+-++-.+..|-+..+ .+.-|+| |||-...|-
T Consensus 242 dvwevIeaAnt~P~~~~~-~PGpGvG--GHCIpvDP~ 275 (436)
T COG0677 242 DVWEVIEAANTKPRVNIF-YPGPGVG--GHCIPVDPY 275 (436)
T ss_pred cHHHHHHHhccCCceeec-CCCCCCC--CcccccCch
Confidence 7 7777777777775444 3333666 999999886
No 60
>KOG0062|consensus
Probab=32.29 E-value=71 Score=32.64 Aligned_cols=173 Identities=17% Similarity=0.193 Sum_probs=96.5
Q ss_pred eeCCchh-HHHHHHHHhcCCc---------------ccceecccccccceEEEeccchhhhhhccccchhhHHhhhchhh
Q psy2118 127 LITGSHK-AFALYKAVEEGVN---------------HMWTVSAFQMHPCTIMICDEDATQELRVKTVNFEQLCINYANEH 190 (357)
Q Consensus 127 ~~~G~~K-adal~k~l~~~~~---------------~~~pv~~l~~~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~ 190 (357)
..+|.+| +-+|++++....+ -.|....|+..+.+++++-.+..|. |.--+-.|.|-|+|
T Consensus 198 slSGGWrMrlaLARAlf~~pDlLLLDEPTNhLDv~av~WLe~yL~t~~~T~liVSHDr~FL-----n~V~tdIIH~~~~k 272 (582)
T KOG0062|consen 198 SLSGGWRMRLALARALFAKPDLLLLDEPTNHLDVVAVAWLENYLQTWKITSLIVSHDRNFL-----NTVCTDIIHLENLK 272 (582)
T ss_pred ccCcchhhHHHHHHHHhcCCCEEeecCCcccchhHHHHHHHHHHhhCCceEEEEeccHHHH-----HHHHHHHHHHhhhh
Confidence 3467777 7899999875321 1256666666676666666665443 22335667777777
Q ss_pred hHHHHhhh-cch--------hhHHHHHHcC-----Ccc--cceeecCC-----cceeeeecCCCCCCCC--CcceeecCC
Q psy2118 191 LQYYFNQH-VFQ--------YEQEEYNKEG-----IRW--RHIEFSDN-----TLCLQLVEGKPNGIGP--DGHIAFNEP 247 (357)
Q Consensus 191 lq~~~~~~-~f~--------~e~~~y~~Eg-----i~~--~~i~~~~n-----~~~~~ll~~~~~G~~~--dGH~a~~~P 247 (357)
|-.|--+. .|. ..+.+|+..- +.. ....|+.+ +..+.+|++.|.|--. +--+.+.||
T Consensus 273 L~~YkGN~~~Fvk~k~E~~~n~qrefe~q~~~R~h~q~fid~FrYna~ra~svqSRIk~L~kl~~lk~~~~~~~~~~~fP 352 (582)
T KOG0062|consen 273 LDYYKGNYSQFVKTKPEAKKNQQREFEVQMKYRAHLQVFIDKFRYNAARASSVQSRIKMLGKLPALKSTLIEVLIGFLFP 352 (582)
T ss_pred hhhhcCcHHHHHHhhHHhhhhhhhhcchHHHHHHHHHHHHHHhccCcccchhHHHHHHHhccCCCCCccceecccceecC
Confidence 76653211 111 1122332111 111 12334432 1234555533333222 677899999
Q ss_pred C--CCCCc-cceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHHHh
Q psy2118 248 G--SSLAS-RTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVE 315 (357)
Q Consensus 248 ~--~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~ 315 (357)
. ..+.. ..++..+. |+. .|..|++|--++...=+.+|-.++...|.+|+-.++-...
T Consensus 353 ~~~e~~~~p~l~i~~V~----------f~y-~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~ 412 (582)
T KOG0062|consen 353 TEGEVLSPPNLRISYVA----------FEY-TPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKG 412 (582)
T ss_pred CCCCcCCCCeeEEEeee----------ccC-CCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhc
Confidence 7 22211 12222221 332 3444467888888888889999999999999977776655
No 61
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.72 E-value=1.3e+02 Score=27.79 Aligned_cols=69 Identities=23% Similarity=0.197 Sum_probs=45.7
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCC---CccccccchHHHHHHHHHHHHhCCeeEEEEeecCCCcccccC
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGP---DNYFVLGLPTECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNE 73 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~---~~~~~~gl~~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~ 73 (357)
||+.++.+...-+.++++.|.+.+....... .-.+++|..+-.-+...... +.++=++||-. ||.+|+-
T Consensus 1 ~~~~i~~~~~~~s~~~~~~l~~~~~~~~~~~~~~D~vi~iGGDGT~L~a~~~~~---~~~iPilGIN~-G~lGFL~ 72 (259)
T PRK00561 1 MKYKIFASTTPQTEPVLPKLKKVLKKKLAVEDGADYLFVLGGDGFFVSTAANYN---CAGCKVVGINT-GHLGFYT 72 (259)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHhhCCCccCCCCEEEEECCcHHHHHHHHHhc---CCCCcEEEEec-CCCcccc
Confidence 8888999988889999999999886522111 12335777775444333332 33566788865 8888864
No 62
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=26.85 E-value=1.5e+02 Score=25.28 Aligned_cols=9 Identities=22% Similarity=0.637 Sum_probs=5.0
Q ss_pred eeEEEEeec
Q psy2118 56 IHLFVGGIG 64 (357)
Q Consensus 56 ~DlvllGiG 64 (357)
.|++++|||
T Consensus 100 pdiv~vglG 108 (171)
T cd06533 100 ADILFVGLG 108 (171)
T ss_pred CCEEEEECC
Confidence 355555555
No 63
>PF11210 DUF2996: Protein of unknown function (DUF2996); InterPro: IPR021374 This family of proteins has no known function.
Probab=24.72 E-value=1.7e+02 Score=23.63 Aligned_cols=59 Identities=20% Similarity=0.396 Sum_probs=43.8
Q ss_pred hHHHHhhhcchhhHHHHHHcCCcccceeecCC------cceeeeecCCCCCCCCCc--ceeecCCCCCCCcc
Q psy2118 191 LQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDN------TLCLQLVEGKPNGIGPDG--HIAFNEPGSSLASR 254 (357)
Q Consensus 191 lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n------~~~~~ll~~~~~G~~~dG--H~a~~~P~~~~~~~ 254 (357)
+.+|+.++++..-++..+++||.-..+.|.++ .+|..+. |-..+| ..---||..++.+.
T Consensus 7 F~efi~ed~lPaL~~~l~~~Gi~d~~L~f~~~~~pi~g~~CW~v~-----G~~~~~~r~Fwl~F~~~~i~g~ 73 (119)
T PF11210_consen 7 FPEFIEEDFLPALKKALEKEGISDVELSFEKNKRPIVGGPCWQVI-----GSWPKGQRQFWLYFPEEDITGP 73 (119)
T ss_pred HHHHHHHhhhHHHHHHHHHcCCCcceEEeccCCccccCCcceEEE-----EEecCCceEEEEEecccccCcc
Confidence 46788899999999999999998888888865 5677777 666666 33444676555544
No 64
>PRK05723 flavodoxin; Provisional
Probab=22.10 E-value=2.4e+02 Score=23.58 Aligned_cols=67 Identities=19% Similarity=0.171 Sum_probs=38.1
Q ss_pred CEE-EEcCCHHHHHHHHHHHHHHHHhccCCCC---------------Ccccccc--------chHHHHHHHHHHHH----
Q psy2118 1 MRL-IILDDVSNVAEWSARYVLKKITDFKPGP---------------DNYFVLG--------LPTECVQYEKDIKE---- 52 (357)
Q Consensus 1 m~~-~~~~~~~~~~~~~a~~i~~~l~~~~~~~---------------~~~~~~g--------l~~~~~~y~~~i~~---- 52 (357)
|++ ++|-|..-.++.+|+.|.+.+...--.. ...++++ ++.++..+.+.|.+
T Consensus 1 ~~i~I~ygS~tG~ae~~A~~la~~l~~~g~~~~~~~~~~~~~~~~~~~~~li~~~sT~G~Ge~Pd~~~~f~~~L~~~~~~ 80 (151)
T PRK05723 1 MKVAILSGSVYGTAEEVARHAESLLKAAGFEAWHNPRASLQDLQAFAPEALLAVTSTTGMGELPDNLMPLYSAIRDQLPA 80 (151)
T ss_pred CeEEEEEEcCchHHHHHHHHHHHHHHHCCCceeecCcCCHhHHHhCCCCeEEEEECCCCCCCCchhHHHHHHHHHhcCcc
Confidence 555 4567777778888888877775421010 0112222 33366666555653
Q ss_pred -hCCeeEEEEeecCCC
Q psy2118 53 -AGGIHLFVGGIGPDG 67 (357)
Q Consensus 53 -~~~~DlvllGiG~dG 67 (357)
+.+..+.++|+|.-.
T Consensus 81 ~l~~~~~aVfGLGDs~ 96 (151)
T PRK05723 81 AWRGLPGAVIALGDSS 96 (151)
T ss_pred CCCCCEEEEEeEeCCc
Confidence 334667888888653
Done!