Query psy2118
Match_columns 357
No_of_seqs 328 out of 2751
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 16:32:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2118.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2118hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hn6_A Glucosamine-6-phosphate 100.0 2.7E-33 9.4E-38 261.0 19.2 176 1-176 22-272 (289)
2 3hn6_A Glucosamine-6-phosphate 100.0 8.9E-32 3E-36 250.8 12.9 127 224-355 152-278 (289)
3 3tx2_A Probable 6-phosphogluco 100.0 2.9E-29 1E-33 229.7 10.7 118 42-172 124-250 (251)
4 3oc6_A 6-phosphogluconolactona 100.0 4.5E-29 1.5E-33 228.1 10.8 117 42-171 124-247 (248)
5 3ico_A 6PGL, 6-phosphogluconol 100.0 5.5E-29 1.9E-33 229.7 10.9 118 42-172 140-266 (268)
6 1ne7_A Glucosamine-6-phosphate 100.0 3.7E-28 1.3E-32 227.2 16.4 181 1-181 1-256 (289)
7 1lkx_A Myosin IE heavy chain; 100.0 1.4E-30 4.6E-35 267.6 -4.6 184 59-250 269-469 (697)
8 2v26_A Myosin VI; calmodulin-b 99.9 2E-30 6.9E-35 269.7 -5.1 185 59-250 336-535 (784)
9 4anj_A Unconventional myosin-V 99.9 5.3E-30 1.8E-34 272.5 -5.3 202 42-250 313-539 (1052)
10 1w7j_A Myosin VA; motor protei 99.9 7.8E-30 2.7E-34 265.3 -5.4 198 42-250 301-519 (795)
11 3eb9_A 6-phosphogluconolactona 99.9 4.7E-27 1.6E-31 216.9 13.6 119 42-172 126-263 (266)
12 4db1_A Myosin-7; S1DC, cardiac 99.9 3.6E-30 1.2E-34 266.9 -9.3 181 59-250 352-544 (783)
13 3lwd_A 6-phosphogluconolactona 99.9 6.8E-28 2.3E-32 217.1 6.8 147 1-158 3-219 (226)
14 3oc6_A 6-phosphogluconolactona 99.9 2E-27 6.7E-32 217.2 8.2 99 234-345 148-248 (248)
15 3ico_A 6PGL, 6-phosphogluconol 99.9 3E-27 1E-31 218.1 9.0 100 234-346 166-267 (268)
16 1w9i_A Myosin II heavy chain; 99.9 2.5E-29 8.5E-34 259.9 -5.9 198 42-250 320-539 (770)
17 3eb9_A 6-phosphogluconolactona 99.9 5E-27 1.7E-31 216.7 9.6 102 233-346 157-264 (266)
18 1kk8_A Myosin heavy chain, str 99.9 1.7E-29 5.6E-34 264.1 -8.1 181 59-250 351-543 (837)
19 3tx2_A Probable 6-phosphogluco 99.9 4.5E-27 1.5E-31 215.2 8.7 99 234-345 150-250 (251)
20 3e15_A Glucose-6-phosphate 1-d 99.9 1.7E-27 5.8E-32 222.7 6.0 166 1-168 27-295 (312)
21 3nwp_A 6-phosphogluconolactona 99.9 2.7E-27 9.2E-32 214.3 6.4 149 1-159 6-224 (233)
22 2dfs_A Myosin-5A; myosin-V, in 99.9 7.2E-29 2.5E-33 266.6 -5.4 198 42-250 301-519 (1080)
23 3lhi_A Putative 6-phosphogluco 99.9 4.8E-27 1.6E-31 212.7 7.2 149 1-159 3-223 (232)
24 1fs5_A Glucosamine-6-phosphate 99.9 2.6E-25 8.9E-30 205.7 18.5 173 1-173 1-248 (266)
25 2ycu_A Non muscle myosin 2C, a 99.9 3.4E-28 1.2E-32 259.5 -3.1 200 41-250 295-519 (995)
26 1g8x_A Myosin II heavy chain f 99.9 2.5E-28 8.5E-33 260.4 -4.5 198 42-250 320-539 (1010)
27 1ne7_A Glucosamine-6-phosphate 99.9 9.8E-26 3.4E-30 210.8 13.0 127 224-355 131-257 (289)
28 2bkx_A Glucosamine-6-phosphate 99.9 8.7E-25 3E-29 199.3 18.0 130 42-172 112-241 (242)
29 1y89_A DEVB protein; structura 99.9 1.4E-25 4.8E-30 204.1 12.3 118 42-172 111-237 (238)
30 3css_A 6-phosphogluconolactona 99.9 8.3E-25 2.8E-29 202.2 15.8 122 41-172 128-265 (267)
31 2ri0_A Glucosamine-6-phosphate 99.9 4.2E-24 1.4E-28 193.8 17.5 168 1-171 2-233 (234)
32 1i84_S Smooth muscle myosin he 99.9 3.7E-27 1.3E-31 257.6 -3.4 199 42-250 327-550 (1184)
33 1fs5_A Glucosamine-6-phosphate 99.9 9.3E-25 3.2E-29 201.9 12.6 126 224-354 131-256 (266)
34 1vl1_A 6PGL, 6-phosphogluconol 99.9 2.2E-25 7.4E-30 201.7 7.7 107 42-166 123-232 (232)
35 3css_A 6-phosphogluconolactona 99.9 4.1E-25 1.4E-29 204.2 7.4 104 233-346 160-266 (267)
36 2bkx_A Glucosamine-6-phosphate 99.9 3.9E-24 1.3E-28 195.0 12.2 117 224-346 126-242 (242)
37 2ri0_A Glucosamine-6-phosphate 99.9 4.9E-24 1.7E-28 193.4 12.1 116 224-345 119-234 (234)
38 1y89_A DEVB protein; structura 99.9 2.4E-24 8.1E-29 196.0 8.7 99 234-345 137-237 (238)
39 3lwd_A 6-phosphogluconolactona 99.9 1.1E-23 3.6E-28 189.7 8.3 93 234-335 131-224 (226)
40 3e15_A Glucose-6-phosphate 1-d 99.9 3.2E-24 1.1E-28 200.6 4.5 111 224-341 159-295 (312)
41 3nwp_A 6-phosphogluconolactona 99.9 1.8E-22 6.1E-27 182.6 9.7 94 224-331 130-223 (233)
42 3lhi_A Putative 6-phosphogluco 99.9 1.3E-22 4.5E-27 183.5 7.6 95 224-332 128-223 (232)
43 1vl1_A 6PGL, 6-phosphogluconol 99.9 4.7E-22 1.6E-26 179.8 8.2 93 224-339 138-232 (232)
44 2r5f_A Transcriptional regulat 99.2 1.6E-11 5.5E-16 112.8 8.5 147 8-172 99-262 (264)
45 2r5f_A Transcriptional regulat 99.2 3E-11 1E-15 111.1 6.6 102 223-345 152-262 (264)
46 2okg_A Central glycolytic gene 99.0 2.7E-11 9.2E-16 110.8 0.0 145 9-172 97-251 (255)
47 2okg_A Central glycolytic gene 99.0 3.4E-11 1.2E-15 110.1 -0.2 100 224-345 149-251 (255)
48 2w48_A Sorbitol operon regulat 98.9 2E-10 6.9E-15 108.2 2.2 116 42-172 191-313 (315)
49 2w48_A Sorbitol operon regulat 98.9 2.3E-10 7.8E-15 107.8 1.5 102 224-345 205-313 (315)
50 2gnp_A Transcriptional regulat 98.9 7.9E-10 2.7E-14 101.6 4.2 104 223-346 150-260 (266)
51 2gnp_A Transcriptional regulat 98.8 6.8E-10 2.3E-14 102.1 2.5 147 9-172 98-259 (266)
52 2o0m_A Transcriptional regulat 98.8 2.4E-10 8.3E-15 109.0 -0.7 100 224-345 236-339 (345)
53 2o0m_A Transcriptional regulat 98.8 4.2E-10 1.5E-14 107.3 0.6 146 8-172 183-339 (345)
54 3nze_A Putative transcriptiona 98.1 5.9E-06 2E-10 75.7 7.0 110 43-172 138-261 (267)
55 3nze_A Putative transcriptiona 98.0 1.1E-05 3.8E-10 73.9 7.5 66 268-346 193-262 (267)
56 3kv1_A Transcriptional repress 97.6 4.3E-05 1.5E-09 69.9 4.3 115 44-172 137-259 (267)
57 3efb_A Probable SOR-operon reg 97.5 0.00021 7.3E-09 65.2 7.8 106 44-171 144-263 (266)
58 3kv1_A Transcriptional repress 97.2 0.00051 1.7E-08 62.7 6.7 64 270-346 193-260 (267)
59 3efb_A Probable SOR-operon reg 97.1 0.0005 1.7E-08 62.7 5.1 65 268-345 196-264 (266)
60 2a7y_A Hypothetical protein RV 23.2 33 0.0011 24.8 1.5 15 236-250 44-58 (83)
No 1
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=100.00 E-value=2.7e-33 Score=260.98 Aligned_cols=176 Identities=61% Similarity=1.029 Sum_probs=159.4
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.+++++.+|++|.+.++.+++.++..+++|+++
T Consensus 22 M~i~i~~~~~~la~~aA~~i~~~i~~a~~~~~~~~~l~LsgGsTP~~~y~~L~~~~~~~~idw~~v~~f~~DEr~gvp~~ 101 (289)
T 3hn6_A 22 MRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEEN 101 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHHhhccCCcEEEEECCCccHHHHHHHHHHhHhhcCCCchheEEEeCcceecCCCC
Confidence 89999999999999999999999998665544445444433
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
+|++|++.|+++++||++|||||.|||||||||++++.+.++++
T Consensus 102 ~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~d~~~~a~~Ye~~i~~~~~~Dl~lLGmG~DGH~asnfPg~~l~~~t~~v 181 (289)
T 3hn6_A 102 HPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSFGGIMLFVGGIGPDGHIAFNEPGSSLTSRTRIK 181 (289)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHTTSCSEEEEECCTTSCBTTBCTTCCTTCCSEEE
T ss_pred cHHHHHHHHHHHhhccCCCCHHHeecCCCCCCCHHHHHHHHHHHHhhcCCCCEEEEccCCCCceeecCCCCcccccceEE
Confidence 78999999999999999999999999999999999988899999
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.+++.++..++++|+.+++.+|.+|||||+++|++||+++++++|++|++++++++.++.+..+|++.++.|++++|++|
T Consensus 182 ~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD 261 (289)
T 3hn6_A 182 TLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAIIVSD 261 (289)
T ss_dssp ECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEE
T ss_pred eccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEEEEEcChHHHHHHHHHHhCCCCcccChHHHccCCCEEEEEc
Confidence 99999998889999878899999999999999999999999999999999999999988777899999999999999999
Q ss_pred cchhhhhhccc
Q psy2118 166 EDATQELRVKT 176 (357)
Q Consensus 166 ~~a~~~l~~~~ 176 (357)
++|++++..++
T Consensus 262 ~~Aa~~L~~~~ 272 (289)
T 3hn6_A 262 KNATYELKVGT 272 (289)
T ss_dssp SGGGTTSBHHH
T ss_pred HHHHccccHhH
Confidence 99999886543
No 2
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=99.97 E-value=8.9e-32 Score=250.80 Aligned_cols=127 Identities=62% Similarity=1.010 Sum_probs=119.9
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-+| |||+||||||||||+++++.++++.+++.++..+.++|+.+.+++|++|||||+++|++||+|+|+++|
T Consensus 152 ~Dl~lL-----GmG~DGH~asnfPg~~l~~~t~~v~l~~~t~~~n~~~f~~~~~~~P~~rITl~l~~I~~Ar~i~lla~G 226 (289)
T 3hn6_A 152 IMLFVG-----GIGPDGHIAFNEPGSSLTSRTRIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNG 226 (289)
T ss_dssp CSEEEE-----ECCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECS
T ss_pred CCEEEE-----ccCCCCceeecCCCCcccccceEEeccHHHHHHhhhhccCCCCCCCCeEEECCHHHHHccCeEEEEEcC
Confidence 355556 999999999999999999999999999999999999997678999999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhccc
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKV 355 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~~ 355 (357)
++||++|+++++|+++.++|+|+++.|++++||+|++||+.|+.+|++||+.
T Consensus 227 ~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~~~~~~y~~~ 278 (289)
T 3hn6_A 227 HNKARALKHAIEKGVNHMWTISALQLHKNAIIVSDKNATYELKVGTVEYFND 278 (289)
T ss_dssp GGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEESGGGTTSBHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCcccChHHHccCCCEEEEEcHHHHccccHhHHHHHHH
Confidence 9999999999999988899999999999999999999999999999999974
No 3
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=99.96 E-value=2.9e-29 Score=229.74 Aligned_cols=118 Identities=22% Similarity=0.292 Sum_probs=103.4
Q ss_pred HHHHHHHHHHH-------hCCeeEEEEeecCCCcccccCCCCCCCCCc--eEEecchHHHHHHhcccCCCCCCCCcccee
Q psy2118 42 ECVQYEKDIKE-------AGGIHLFVGGIGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALT 112 (357)
Q Consensus 42 ~~~~y~~~i~~-------~~~~DlvllGiG~dGHiaf~~p~~~~~~~~--~v~~~~~~~~~~~a~~l~~~~~~~p~~riT 112 (357)
+|++|++.|++ .++||++|||||.|||||||||+++..+.+ +++.++ +.+++|.+|||
T Consensus 124 ~a~~Ye~~i~~~~~~~~~~~~~Dl~lLG~G~DGH~as~fPg~~~~~~~~~~vv~~~-------------~~~~~P~~riT 190 (251)
T 3tx2_A 124 AALAYEQLLAANAEPGQDCPAFDVHLLGMGGEGHINSLFPHTDAVKETQRLVVAVP-------------DSPKPPPQRIT 190 (251)
T ss_dssp HHHHHHHHHHHTSCTTCSSCCCSEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEES-------------CCSSSSSCEEE
T ss_pred HHHHHHHHHHhhhccccCCCCCCEEEECCCCCCceEEcCCcChhhccCcceEEEec-------------CCCCCCCcEEE
Confidence 68999999998 779999999999999999999998643333 344322 45678899999
Q ss_pred cchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 113 VGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 113 lt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
||+++|++||+++++++|++|++++++++.+..+..||++.++.|++++|++|+.|++++
T Consensus 191 lt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 191 LTLPAIQRSREVWLVVSGEAKADAVAAAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL 250 (251)
T ss_dssp ECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred ECHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCCCCChHHhccCCCEEEEEeHHHHhhc
Confidence 999999999999999999999999999999877678999999999999999999998764
No 4
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=99.96 E-value=4.5e-29 Score=228.14 Aligned_cols=117 Identities=21% Similarity=0.290 Sum_probs=102.4
Q ss_pred HHHHHHHHHHH-----hCCeeEEEEeecCCCcccccCCCCCCCCCc--eEEecchHHHHHHhcccCCCCCCCCccceecc
Q psy2118 42 ECVQYEKDIKE-----AGGIHLFVGGIGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVG 114 (357)
Q Consensus 42 ~~~~y~~~i~~-----~~~~DlvllGiG~dGHiaf~~p~~~~~~~~--~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt 114 (357)
+|++|++.|++ .++||++|||||.|||||||||+++..+.+ +++.++ +.+++|.+|||||
T Consensus 124 ~a~~Ye~~i~~~~~~~~~~~Dl~lLG~G~dGH~aslfPg~~~~~~~~~~vv~~~-------------~~~~~P~~riTlt 190 (248)
T 3oc6_A 124 AAAGYAQLLSANFDSSVPGFDVHLLGMGGEGHVNSLFPDTDAVRETERLVVGVS-------------DSPKPPPRRITLT 190 (248)
T ss_dssp HHHHHHHHHHHHHTSSSCSEEEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEES-------------CCSSSSSCEEEEC
T ss_pred HHHHHHHHHHHhcccCCCCCCEEEECCCCCCCEEEcCCCChhhccCcceEEEec-------------CCCCCCCcEEEcC
Confidence 68899999997 789999999999999999999998644333 343322 4567889999999
Q ss_pred hhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhh
Q psy2118 115 VGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 115 ~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~ 171 (357)
+++|++||+++++++|++|++++++++.+..+..||++.++.|++++|++|+.|+++
T Consensus 191 ~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~ 247 (248)
T 3oc6_A 191 LPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWLVDEAAAAK 247 (248)
T ss_dssp HHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCSSEEEEEEETTTTTT
T ss_pred HHHHHhhCeEEEEEeCHHHHHHHHHHHcCCCCCCCChHHhccCCCEEEEEchHHhhC
Confidence 999999999999999999999999999987767899999999999999999998764
No 5
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=99.96 E-value=5.5e-29 Score=229.69 Aligned_cols=118 Identities=24% Similarity=0.341 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHh-------CCeeEEEEeecCCCcccccCCCCCCCCCc-e-EEecchHHHHHHhcccCCCCCCCCcccee
Q psy2118 42 ECVQYEKDIKEA-------GGIHLFVGGIGPDGHIAFNEPGSSLASRT-R-LKTLAQETLEANARFFDNDIKKVPKEALT 112 (357)
Q Consensus 42 ~~~~y~~~i~~~-------~~~DlvllGiG~dGHiaf~~p~~~~~~~~-~-v~~~~~~~~~~~a~~l~~~~~~~p~~riT 112 (357)
+|++|++.|++. ++||++|||||.|||||||||+++..+.+ + ++.++ +.+++|.+|||
T Consensus 140 ~a~~Ye~~i~~~~~~~~~~p~~Dl~lLGmG~DGH~as~fPg~~~~~~t~~~vv~~~-------------~~~~~P~~rIT 206 (268)
T 3ico_A 140 AALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPHSPAVLESTRMVVAVD-------------DSPKPPPRRIT 206 (268)
T ss_dssp HHHHHHHHHHHHSSTTCSSCCCSEEEECCCTTCCBTTBCTTCHHHHCSSCSEEEES-------------CCSSSSSCEEE
T ss_pred HHHHHHHHHhhccCCCCCCCCcceEEeccCCcccccccCCCChhhhhhceEEEEec-------------CCCCCCCceEE
Confidence 689999999987 48999999999999999999998644333 1 33222 35678899999
Q ss_pred cchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 113 VGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 113 lt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
||+++|++||+++++++|++|++++++++.+..+..||++.++.|++++|++|++|++++
T Consensus 207 lt~~~I~~Ar~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L 266 (268)
T 3ico_A 207 LTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKL 266 (268)
T ss_dssp ECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEEEEEEHHHHTTC
T ss_pred EechhhhccceEEEEecCCCchHHHHHHhcCCCCccccccccccccceEEEecchhhhhC
Confidence 999999999999999999999999999999877678999999999999999999998765
No 6
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=99.95 E-value=3.7e-28 Score=227.23 Aligned_cols=181 Identities=71% Similarity=1.185 Sum_probs=154.0
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.+++++.+|++|.+.+++++..++..+++|+++
T Consensus 1 m~i~i~~~~~~la~~aA~~i~~~i~~~~~~~~~~~~lglsgGsTp~~~~~~L~~~~~~~~i~~~~v~v~~lDEr~gv~~~ 80 (289)
T 1ne7_A 1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRD 80 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHTTSCCCTTEEEEESEEETTSCTT
T ss_pred CeEEEECCHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEcCCccHHHHHHHHHhhhhccCCCchheEEEeCceeecCCCC
Confidence 89999999999999999999999987443332223322221
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
+|.+|++.|+..+++|++|+|||.|||++|+||++.+.+.++++
T Consensus 81 ~~~Sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~ye~~i~~~~~~Dl~lLGiG~dGH~aslfPg~~l~~~~~~~ 160 (289)
T 1ne7_A 81 HPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAAGGIELFVGGIGPDGHIAFNEPGSSLVSRTRVK 160 (289)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHTTSCSEEEECCCTTCCSTTCCTTCCTTCCSEEE
T ss_pred cHHHHHHHHHHHhhccCCCCHHHEecCCCCCCCHHHHHHHHHHHHHhcCCCCEEEEccCCCCcceecCCCCCCccccceE
Confidence 67899999999999999999999999999999998887777888
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.+...+...++++|..+.+.+|..+||+|++.|+++++++++++|++|++++++++.++....||++.++.|++++|++|
T Consensus 161 ~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G~~Ka~ai~~al~g~~~~~~Pas~l~~h~~~~li~D 240 (289)
T 1ne7_A 161 TLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCD 240 (289)
T ss_dssp ECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEE
T ss_pred EcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEEEEEcCHHHHHHHHHHHhCCCCccCchHHHccCCCEEEEEc
Confidence 88887776677888777788899999999999999999999999999999999999988767899999999999999999
Q ss_pred cchhhhhhccccchhh
Q psy2118 166 EDATQELRVKTVNFEQ 181 (357)
Q Consensus 166 ~~a~~~l~~~~n~feq 181 (357)
+.++..+.+....|..
T Consensus 241 ~~aA~~L~~~~~~~~~ 256 (289)
T 1ne7_A 241 EDATLELKVKTVKYFK 256 (289)
T ss_dssp GGGGTTSBHHHHHHHH
T ss_pred HHHHhhcccchhhhhH
Confidence 9999887544334433
No 7
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=99.95 E-value=1.4e-30 Score=267.65 Aligned_cols=184 Identities=30% Similarity=0.380 Sum_probs=140.1
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhcc----ceEEEeeCC----
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDA----QEVMILITG---- 130 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a----~~i~~~~~G---- 130 (357)
+|+||+|.||+.|............+...+.+.+..++.+||+++..+ ...+|. +.+... ...+.....
T Consensus 269 ilaaILhLGNi~F~~~~~~~~~~~~~~v~~~~~l~~~a~LLgv~~~~L-~~~L~~--r~~~~~~g~~~e~i~~~l~~~qA 345 (697)
T 1lkx_A 269 ILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSL-SIALCY--RSISTGVGKRCSVISVPMDCNQA 345 (697)
T ss_dssp HHHHHHHHTTCCEEEETTC----CEEEESSHHHHHHHHHHHTSCHHHH-HHHHHB--CC----------CCCCBCCHHHH
T ss_pred HHHHHHhcccceEeecccccCCCCcceeCCHHHHHHHHHhhCCCHHHH-HHHHhc--cEEeeccCCCCCeEEecCCHHHH
Confidence 789999999999964111111112333446778889999999988777 444443 222222 222222211
Q ss_pred chhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhh
Q psy2118 131 SHKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYE 203 (357)
Q Consensus 131 ~~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e 203 (357)
...||+|+|+||+++ |+|+|.+||. ...+|++||++|++. |+.|+|||||||||||||||+|++++|+.|
T Consensus 346 ~~~rdalaK~lY~rL-F~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~--f~~NsFEQlcINy~NEkLQq~F~~~~f~~E 422 (697)
T 1lkx_A 346 AYSRDALAKALYERL-FNWLVSKINTIINCTTEKGPVIGILDIYGFEV--FQNNSFEQLNINFCNEKLQQLFIELTLKSE 422 (697)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCSCCCCEEEEEECCCCCC--CSSBCHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHhhcCCCCCCceeEEeeccccccc--cCcCCHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 134799999999998 9999999986 245899999999664 688999999999999999999999999999
Q ss_pred HHHHHHcCCcccceeecCCcceeeeecCCCCCCCC--CcceeecCCCCC
Q psy2118 204 QEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGP--DGHIAFNEPGSS 250 (357)
Q Consensus 204 ~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~--dGH~a~~~P~~~ 250 (357)
|++|.+|||+|..|.|.||++|+|||+++|.||.. |..+ .+|..+
T Consensus 423 qeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslLDEec--~~p~~t 469 (697)
T 1lkx_A 423 QEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEAC--LIAKST 469 (697)
T ss_dssp HHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHHHHHH--HSTTCC
T ss_pred HHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhhHHhh--CCCCCC
Confidence 99999999999999999999999999999999998 4443 677643
No 8
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=99.95 E-value=2e-30 Score=269.68 Aligned_cols=185 Identities=29% Similarity=0.390 Sum_probs=143.1
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhc----c-ceEEEeeCC---
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMD----A-QEVMILITG--- 130 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~----a-~~i~~~~~G--- 130 (357)
+|+||+|+||+.|...+. ..+.+.+...+.+.+..++.+||+++..+ ...+|. +.+.. + .+.+.....
T Consensus 336 ilaaILhLGNi~F~~~~~-~~~~~~v~~~~~~~l~~~a~LLgv~~~~L-~~aL~~--r~~~t~~g~~~ge~i~~~l~~~q 411 (784)
T 2v26_A 336 VVAGVLHLGNIDFEEAGS-TSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTT--RVMLTTAGGAKGTVIKVPLKVEQ 411 (784)
T ss_dssp HHHHHHHHHTCCEEECTT-TTSSEEECGGGHHHHHHHHHHHTCCHHHH-HHHHHE--EEC-----------CEEECCHHH
T ss_pred HHHHHHhcccceeeeccC-CCCccccccCCHHHHHHHHHHhCCCHHHH-HHHHhh--cEEeccccCCCCCeEeecCCHHH
Confidence 789999999999975322 22334444445678889999999988777 444443 23321 1 122222211
Q ss_pred -chhHHHHHHHHhcCCcccceecccccc------cceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhh
Q psy2118 131 -SHKAFALYKAVEEGVNHMWTVSAFQMH------PCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYE 203 (357)
Q Consensus 131 -~~Kadal~k~l~~~~~~~~pv~~l~~~------~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e 203 (357)
...||+|+|+||+++ |+|+|.+||.. ..+|++||++|++. |+.|+|||||||||||||||+|++++|+.|
T Consensus 412 A~~~rdalaK~lY~rL-F~wlV~~IN~~l~~~~~~~~IGvLDI~GFE~--f~~NsFEQlcINyaNEkLQq~F~~~~f~~E 488 (784)
T 2v26_A 412 ANNARDALAKTVYSHL-FDHVVNRVNQCFPFETSSYFIGVLDIAGFEY--FEHNSFEQFCINYCNEKLQQFFNERILKEE 488 (784)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHTTSCCSCCSEEEEEEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHhcCcccccceeeecccCCccc--CCcCCHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 234799999999998 99999999862 45899999999664 689999999999999999999999999999
Q ss_pred HHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 204 QEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 204 ~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|++|.+|||+|..|.|.||++|+|||+++|.||..--.-.+.+|+..
T Consensus 489 qeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLDEe~~~p~~t 535 (784)
T 2v26_A 489 QELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 535 (784)
T ss_dssp HHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCC
T ss_pred HHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHHHHhcCCCCC
Confidence 99999999999999999999999999999999998333345778743
No 9
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=99.94 E-value=5.3e-30 Score=272.51 Aligned_cols=202 Identities=27% Similarity=0.369 Sum_probs=148.4
Q ss_pred HHHHHHHHHHHhC--Cee--------EEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GIH--------LFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~D--------lvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++++|.+...++. +|+ -+|+||+|+||+.|...+.. .+.+.+...+.+.+..++.+||+++..+ ...+
T Consensus 313 D~~~f~~~~~Am~~lGfs~~e~~~I~~iLAaILhLGNi~F~~~~~~-~~~~~~~~~~~~~l~~~a~LLgv~~~~L-~~aL 390 (1052)
T 4anj_A 313 DHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST-SGGCNLKNKSTQALEYCAELLGLDQDDL-RVSL 390 (1052)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCEEC--------CEECGGGHHHHHHHHHHTTCCHHHH-HHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcceeEEecCCC-CCCcccccCChHHHHHHHHHhCCCHHHH-HHHH
Confidence 4556666655542 221 28999999999999654322 2334445556677888999999988776 3333
Q ss_pred ecchhhhh-----ccceEEEeeCC----chhHHHHHHHHhcCCcccceeccccc------ccceEEEeccchhhhhhccc
Q psy2118 112 TVGVGTVM-----DAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQM------HPCTIMICDEDATQELRVKT 176 (357)
Q Consensus 112 Tlt~~~i~-----~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~------~~~~i~ilD~~a~~~l~~~~ 176 (357)
|. +.+. ...+++..... ...+|+|+|+||+++ |+|+|.+||. ...+|++||++|++. |..
T Consensus 391 t~--r~~~~~~~~~~~e~i~~~l~~~qA~~~rDaLAK~LY~rL-F~wiV~~IN~~l~~~~~~~~IGILDI~GFE~--f~~ 465 (1052)
T 4anj_A 391 TT--RVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHL-FDHVVNRVNQCFPFETSSYFIGVLDIAGFEY--FEH 465 (1052)
T ss_dssp HE--EC-------------CEECCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTSCCSCCSEEEEEEECCCCCC--CSS
T ss_pred hh--ceeeecccccCceEEEecCCHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcccccccccceEEEEecCCCcc--ccc
Confidence 32 2221 11222222222 234799999999998 9999999986 245899999999764 788
Q ss_pred cchhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 177 VNFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 177 n~feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||||||||++++|+.||++|.+|||+|..|+|.||++|+|||+++|.||..--.-.+.+|+..
T Consensus 466 NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLDEe~~~p~~t 539 (1052)
T 4anj_A 466 NSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPS 539 (1052)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHHHHHHSSSCC
T ss_pred CcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988444456678743
No 10
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=99.94 E-value=7.8e-30 Score=265.33 Aligned_cols=198 Identities=29% Similarity=0.398 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++++|++...++. +| =-+|+||+|+||+.|...+. +.+.+ ..+.+.+..++.+||+++..+ ...+
T Consensus 301 D~~~f~~~~~Am~~lG~s~~e~~~i~~ilaaILhLGNi~F~~~~~---~~~~v-~~~~~~l~~~a~LLgv~~~~L-~~aL 375 (795)
T 1w7j_A 301 DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDS---DSCAI-PPKHDPLTIFCDLMGVDYEEM-AHWL 375 (795)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCEEEET---TEEEC-CTTCHHHHHHHHHHTCCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEeecCC---cceee-cCChHHHHHHHHHhCCCHHHH-HHHh
Confidence 4556666555542 22 12889999999999954321 12222 135567888999999988777 3444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
|. +.+...+..+...... ..+|+|+|+||+++ |+|.|.+||. ...+|++||++|++. |+.|+||
T Consensus 376 ~~--~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rL-F~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~--f~~NsFE 450 (795)
T 1w7j_A 376 CH--RKLATATETYIKPISKLHAINARDALAKHIYANL-FNWIVDHVNKALHSTVKQHSFIGVLDIYGFET--FEINSFE 450 (795)
T ss_dssp SE--EEEECSSCEEEEECCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCSSCCSEEEEEEECCCCCC--CSSCCHH
T ss_pred cc--cEEEeCCceecCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcCCccccceEEeeccCcccc--cCcCCHH
Confidence 33 3444444444433322 34799999999998 9999999985 245899999999764 6899999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||+|++++|+.||++|.+|||+|..+.|.||++|+|||+++ .||..--.-.+.+|+..
T Consensus 451 QlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLDEec~~p~~t 519 (795)
T 1w7j_A 451 QFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGS 519 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHHHHHTSTTCC
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhhhhccCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 78888333445788744
No 11
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=99.94 E-value=4.7e-27 Score=216.86 Aligned_cols=119 Identities=19% Similarity=0.260 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhC-------------CeeEEEEeecCCCcccccCCCCCC-CCC--ceEEecchHHHHHHhcccCCCCC-
Q psy2118 42 ECVQYEKDIKEAG-------------GIHLFVGGIGPDGHIAFNEPGSSL-ASR--TRLKTLAQETLEANARFFDNDIK- 104 (357)
Q Consensus 42 ~~~~y~~~i~~~~-------------~~DlvllGiG~dGHiaf~~p~~~~-~~~--~~v~~~~~~~~~~~a~~l~~~~~- 104 (357)
+|++|++.|++.+ +||++|||||.|||||||||+++. .+. ++++.++ -+.+
T Consensus 126 ~a~~Ye~~i~~~~~~~~~~g~~~~~p~~Dl~lLGmG~DGH~as~fPg~~~l~~~~~~~~v~~~------------~~~~~ 193 (266)
T 3eb9_A 126 VAEAYGKQLASLLPLKSVGEAGPKVPVFDVVLLGLGSDGHTASIFPGSQAEKETDGKVVVSVG------------FPSET 193 (266)
T ss_dssp HHHHHHHHHHHHSCEEETTTTSCEEECCSEEEECCCTTSCBTTBCTTCSGGGCCSSSCSEEEE------------CCCTT
T ss_pred HHHHHHHHHHHhccccccccccccCCCCCEEEEccCCCCCeeecCCCCcccccCCCccEEEec------------CCCcc
Confidence 5789999999974 799999999999999999999875 333 5544332 1144
Q ss_pred -CCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceeccccc-ccceEEEeccchhhhh
Q psy2118 105 -KVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQM-HPCTIMICDEDATQEL 172 (357)
Q Consensus 105 -~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~-~~~~i~ilD~~a~~~l 172 (357)
++|++|||||+++|++||+++++++|++|++++++++.+..+..+|++.++. |++++|++|+.+++++
T Consensus 194 ~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~pAs~l~~~h~~~~~~~D~~Aa~~L 263 (266)
T 3eb9_A 194 MKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENL 263 (266)
T ss_dssp CSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSCSSCCGGGGGGGCSSEEEEEEEHHHHC--
T ss_pred cCCCCeEEEcCHHHHHhcCeEEEEEeCHHHHHHHHHHHhCCCCccchhHHhcCCCCCEEEEEcHHHhccc
Confidence 7889999999999999999999999999999999999988767899999998 9999999999998765
No 12
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=99.94 E-value=3.6e-30 Score=266.89 Aligned_cols=181 Identities=30% Similarity=0.409 Sum_probs=136.3
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeC---C-chhH
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILIT---G-SHKA 134 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~---G-~~Ka 134 (357)
+|+||+|+||+.|...+.. ......+.+.+..++.+||+++..+ ...+|. +.+...+..+.... . ...+
T Consensus 352 ilaaILhLGNi~F~~~~~~----~~~~~~~~~~l~~~a~LLgv~~~~L-~~aL~~--~~i~~~~e~v~~~~~~~qA~~~r 424 (783)
T 4db1_A 352 LTGAIMHFGNMKFKLKQRE----EQAEPDGTEEADKSAYLMGLNSADL-LKGLCH--PRVKVGNEYVTKGQNVQQVIYAT 424 (783)
T ss_dssp HHHHHHHHTTCCEEECTTS----SCEEESCCHHHHHHHHHTTCCHHHH-HHHHHS--CC------CCCCCCCHHHHHHHH
T ss_pred HHHHHHhhccceeeccCCC----cccccCChHHHHHHHHHhCCCHHHH-HHhhcc--eEEEeCCeeEeeCCCHHHHHHHH
Confidence 7899999999999643211 1223345667888999999988777 344443 33332222221111 1 1347
Q ss_pred HHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhHHHH
Q psy2118 135 FALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQEEY 207 (357)
Q Consensus 135 dal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y 207 (357)
|+|+|+||+++ |.|+|.+||. ...+|++||++|++. |..|+|||||||||||||||+|++++|+.||++|
T Consensus 425 dalAK~lY~rL-F~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~--f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY 501 (783)
T 4db1_A 425 GALAKAVYERM-FNWMVTRINATLETKQPRQYFIGVLDIAGFEI--FDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEY 501 (783)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHCCSCCCSEEEEEEECCCCCC--CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhcCCCCCCCceEEEeccccccc--cccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh
Confidence 99999999998 9999999986 235899999998654 6899999999999999999999999999999999
Q ss_pred HHcCCcccceeec-CCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 208 NKEGIRWRHIEFS-DNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 208 ~~Egi~~~~i~~~-~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
.+|||+|..|+|. ||++|+|||++ |.||..--.-.+.+|+..
T Consensus 502 ~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lLDEec~~p~~t 544 (783)
T 4db1_A 502 KKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSILEEECMFPKAT 544 (783)
T ss_dssp HHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHHCC-TTCTTCC
T ss_pred hhcCCCcccccccCChHHHHHHHhC-CCchHhhhhHHhcCCCCC
Confidence 9999999999995 99999999986 679988333345678643
No 13
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=99.94 E-value=6.8e-28 Score=217.15 Aligned_cols=147 Identities=21% Similarity=0.207 Sum_probs=122.4
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|+ ++|+|.+++++.+|+.|.+.+++++.. +..+++++++
T Consensus 3 m~-~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~LsgGstp~~~y~~L~~~~idw~~v~~f~~DEr~vp~~~~~Sn 80 (226)
T 3lwd_A 3 MN-TTQEGRQRLAERLADTVAQALEADLAK-RERALLVVSGGSTPKPFFTSLAAKALPWARVDVTLADERWVTADDADSN 80 (226)
T ss_dssp -C-HHHHHHHHHHHHHHHHHHHHHHHHHTT-SSCEEEEECCSSTTHHHHHHHHTSCSCGGGEEEEESEEESSCTTSTTCH
T ss_pred Cc-eecCCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEcCCCCHHHHHHHHHhcCCCchhEEEEEeeecccCCCChHHH
Confidence 67 889999999999999999888775533 3334444333
Q ss_pred ------------------------------HHHHHHHHHHHhC-CeeEEEEeecCCCcccccCCCCCCCCCceEEecchH
Q psy2118 42 ------------------------------ECVQYEKDIKEAG-GIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQE 90 (357)
Q Consensus 42 ------------------------------~~~~y~~~i~~~~-~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~ 90 (357)
+|++|++.|++++ +||++|||||.|||||||||+++. +++.
T Consensus 81 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ye~~i~~~~~~~Dl~lLG~G~dGH~as~fPg~~~--------L~~~ 152 (226)
T 3lwd_A 81 ARLVRETLLVGPAAEACFHPLTTDDDTPEAGVETVAERLESLPWPASAVILGMGGDGHTASLFPDSEQ--------LATA 152 (226)
T ss_dssp HHHHHHHTSSGGGGGSEEECSCCSSSSHHHHHHHHHHHHHTSCSSBSEEEECCCTTSCBTTBCTTCTT--------HHHH
T ss_pred HHHHHHHhcCCCCcHHhEecCCCCcCCHHHHHHHHHHHHHhcCCCCCEEEECcCCCCCeeecCCCChh--------hhhh
Confidence 7899999999998 899999999999999999999862 3333
Q ss_pred HHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceeccccccc
Q psy2118 91 TLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHP 158 (357)
Q Consensus 91 ~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~ 158 (357)
+ .....++.++++++|++|||||+++|++||+++++++|++|++++++++.+..+..+|++.++.|+
T Consensus 153 ~-~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~ 219 (226)
T 3lwd_A 153 L-ETTSAAVVVHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQP 219 (226)
T ss_dssp H-HCCSSEEEECCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTSC
T ss_pred h-ccCCeEEecCCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHHHcCCCCCcCChHHHhcCC
Confidence 3 333456666788899999999999999999999999999999999999998776789999999874
No 14
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=99.94 E-value=2e-27 Score=217.24 Aligned_cols=99 Identities=24% Similarity=0.300 Sum_probs=88.6
Q ss_pred CCCCCCcceeecCCCCCCCccc--eEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALY 311 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~--~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~ 311 (357)
+|||+||||||||||+++...+ +++.+ .+.+++|++|||||+++|++||+|+|+++|++|+++|+
T Consensus 148 LG~G~dGH~aslfPg~~~~~~~~~~vv~~-------------~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~ 214 (248)
T 3oc6_A 148 LGMGGEGHVNSLFPDTDAVRETERLVVGV-------------SDSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVA 214 (248)
T ss_dssp ECCCTTCCBTTBCTTCHHHHCSSCSEEEE-------------SCCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHH
T ss_pred ECCCCCCCEEEcCCCChhhccCcceEEEe-------------cCCCCCCCcEEEcCHHHHHhhCeEEEEEeCHHHHHHHH
Confidence 3999999999999998755444 45554 24678899999999999999999999999999999999
Q ss_pred HHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 312 KAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 312 ~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
++++|+++.++|||+++.|++++||+|++||+.|
T Consensus 215 ~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L 248 (248)
T 3oc6_A 215 AAVGGADPVDIPAAGAVGRERTVWLVDEAAAAKL 248 (248)
T ss_dssp HHHHTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred HHHcCCCCCCCChHHhccCCCEEEEEchHHhhCC
Confidence 9999998889999999999999999999999865
No 15
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=99.94 E-value=3e-27 Score=218.08 Aligned_cols=100 Identities=26% Similarity=0.348 Sum_probs=89.2
Q ss_pred CCCCCCcceeecCCCCCCCccc-e-EEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRT-R-LKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALY 311 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~-~-~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~ 311 (357)
+|||+||||||||||+++...+ + ++.+ .+.+++|++|||||+++|++||+|+|+++|++|+++|+
T Consensus 166 LGmG~DGH~as~fPg~~~~~~t~~~vv~~-------------~~~~~~P~~rITlt~~~I~~Ar~i~ll~~G~~Ka~av~ 232 (268)
T 3ico_A 166 LGMGPEGHINSLFPHSPAVLESTRMVVAV-------------DDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVA 232 (268)
T ss_dssp ECCCTTCCBTTBCTTCHHHHCSSCSEEEE-------------SCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHH
T ss_pred eccCCcccccccCCCChhhhhhceEEEEe-------------cCCCCCCCceEEEechhhhccceEEEEecCCCchHHHH
Confidence 3999999999999998754444 2 4444 24578899999999999999999999999999999999
Q ss_pred HHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 312 KAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 312 ~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
++++|+++.++|||+++.|++++||+|++||+.|+
T Consensus 233 ~~l~g~~~~~~Pas~l~~h~~~~~~lD~~Aa~~L~ 267 (268)
T 3ico_A 233 AAIGGADPVSVPAAGAVGRQNTLWLLDRDAAAKLP 267 (268)
T ss_dssp HHHTTCCTTTSGGGGCCCSSEEEEEEEHHHHTTCC
T ss_pred HHhcCCCCccccccccccccceEEEecchhhhhCC
Confidence 99999988899999999999999999999999875
No 16
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=99.94 E-value=2.5e-29 Score=259.86 Aligned_cols=198 Identities=27% Similarity=0.431 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++++|.+...++. +| =-+|+||+|.||+.|..++. +. ....+.+.+..++.+||+++..+ ...+
T Consensus 320 D~~~f~~~~~Am~~lGf~~~e~~~i~~ilaaILhLGNi~F~~~~~---~~--~~~~~~~~l~~~a~LLgv~~~~L-~~aL 393 (770)
T 1w9i_A 320 DSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG---EG--AVLKDKTALNAASTVFGVNPSVL-EKAL 393 (770)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCCEECSS---SS--EECSCCHHHHHHHHHHTCCHHHH-HHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhcCceEecCCC---Cc--cccCChHHHHHHHHHhCCCHHHH-HHHh
Confidence 4556666555542 21 12789999999999972211 11 22335667888999999988776 3444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc------ccceEEEeccchhhhhhccccchhh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM------HPCTIMICDEDATQELRVKTVNFEQ 181 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~------~~~~i~ilD~~a~~~l~~~~n~feq 181 (357)
|. +.+...+..+...... ..+|+|+|+||+++ |.|+|.+||. ...+|++||++|++. |..|+|||
T Consensus 394 ~~--~~~~~~~e~v~~~~~~~qA~~~rdalaK~lY~rL-F~wlV~~IN~~l~~~~~~~~IGvLDI~GFE~--F~~NsFEQ 468 (770)
T 1w9i_A 394 ME--PRILAGRDLVAQHLNVEKSSSSRDALVKALYGRL-FLWLVKKINNVLCQERKAYFIGVLDIYGFEI--FKVNSFEQ 468 (770)
T ss_dssp HS--CEEEETTEEEECCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCSCCSEEEEEEECCCCCC--CSSCCHHH
T ss_pred hC--cEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCCeeeeccCccccc--cccCCHHH
Confidence 33 3343334444332222 33799999999998 9999999985 245899999998653 68999999
Q ss_pred HHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeec-CCcceeeeecCC-CCCCCCCcceeecCCCCC
Q psy2118 182 LCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGK-PNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 182 ~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~-~n~~~~~ll~~~-~~G~~~dGH~a~~~P~~~ 250 (357)
||||||||||||+|++++|+.||++|.+|||+|..|+|. ||++|+|||+++ |.||..--.-.+.||+..
T Consensus 469 lCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~GilslLDEec~~p~~t 539 (770)
T 1w9i_A 469 LCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539 (770)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHHHHHHHSSSSCC
T ss_pred HHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhhhhhhhCCCCCC
Confidence 999999999999999999999999999999999999995 999999999984 889998333345778743
No 17
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=99.94 E-value=5e-27 Score=216.72 Aligned_cols=102 Identities=21% Similarity=0.277 Sum_probs=88.0
Q ss_pred CCCCCCCcceeecCCCCCC-Ccc--ceEEecchHHHHHhhhccCCCCC--CCCCceEEeCHHHHhccceEEEEEcCchHH
Q psy2118 233 PNGIGPDGHIAFNEPGSSL-ASR--TRLKTLAQETLEANARFFDNDIK--KVPKEALTVGVGTVMDAQEVMILITGSHKA 307 (357)
Q Consensus 233 ~~G~~~dGH~a~~~P~~~~-~~~--~~~~~~~~~~~~~~~~~f~~~~~--~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka 307 (357)
.+|||+||||||||||+++ ... ++++.++ .+.+ ++|++|||||+++|++||+|+|+++|++|+
T Consensus 157 lLGmG~DGH~as~fPg~~~l~~~~~~~~v~~~------------~~~~~~~~P~~rITlt~~~I~~A~~i~ll~~G~~Ka 224 (266)
T 3eb9_A 157 LLGLGSDGHTASIFPGSQAEKETDGKVVVSVG------------FPSETMKPKVWRVTLSPATIMQARNVIVLATGAEKK 224 (266)
T ss_dssp EECCCTTSCBTTBCTTCSGGGCCSSSCSEEEE------------CCCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGH
T ss_pred EEccCCCCCeeecCCCCcccccCCCccEEEec------------CCCcccCCCCeEEEcCHHHHHhcCeEEEEEeCHHHH
Confidence 3499999999999999775 444 6666552 1145 889999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccchhhhcc-CCcEEEEeeHHHHhhhh
Q psy2118 308 FALYKAVEEGVNHMWTVSAFQM-HPCTIMICDEDATQELR 346 (357)
Q Consensus 308 ~~~~~~l~~~~~~~~Pa~~~~~-~~~~~~~~D~~aa~~l~ 346 (357)
++|+++++|++++.+|||++|. |++++||+|++||+.|+
T Consensus 225 ~av~~~l~g~~~~~~pAs~l~~~h~~~~~~~D~~Aa~~L~ 264 (266)
T 3eb9_A 225 WVVDGILADTAHKAPVARFLRGCEGNVSFLLDKEIAENLA 264 (266)
T ss_dssp HHHHHHHCSSCSSCCGGGGGGGCSSEEEEEEEHHHHC---
T ss_pred HHHHHHHhCCCCccchhHHhcCCCCCEEEEEcHHHhcccc
Confidence 9999999999888999999999 99999999999999874
No 18
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=99.94 E-value=1.7e-29 Score=264.14 Aligned_cols=181 Identities=29% Similarity=0.398 Sum_probs=137.3
Q ss_pred EEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCC----chhH
Q psy2118 59 FVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG----SHKA 134 (357)
Q Consensus 59 vllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G----~~Ka 134 (357)
+|+||+|.||+.|..-+.. +.+ ...+.+.+..++.+||+++..+ ...+|. +.+...+..+..... ...+
T Consensus 351 ilAaILhLGNi~F~~~~~~--~~~--~~~~~~~l~~~a~LLgv~~~~L-~~aL~~--~~~~~~~e~v~~~~~~~qA~~~r 423 (837)
T 1kk8_A 351 CTASILHMGEMKFKQRPRE--EQA--ESDGTAEAEKVAFLCGINAGDL-LKALLK--PKVKVGTEMVTKGQNMNQVVNSV 423 (837)
T ss_dssp HHHHHHHHTTCCEEC------CCC--EESCSHHHHHHHHHHTSCHHHH-HHHHHS--CEEC----CEECCCCHHHHHHHH
T ss_pred HHHHHHhhccceEEecCCC--Ccc--ccCCHHHHHHHHHHHCCCHHHH-HHHhcC--cEEEcCCceEEeCCCHHHHHHHH
Confidence 8899999999999643211 122 2335667888999999988776 344433 333333333332221 2347
Q ss_pred HHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchhhHHhhhchhhhHHHHhhhcchhhHHHH
Q psy2118 135 FALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFEQLCINYANEHLQYYFNQHVFQYEQEEY 207 (357)
Q Consensus 135 dal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~feq~~in~~nE~lq~~~~~~~f~~e~~~y 207 (357)
|+|+|+||+++ |+|.|.+||. ...+|++||++|++. |+.|+|||||||||||||||+|++++|+.||++|
T Consensus 424 dalaK~lY~rL-F~wlV~~IN~~l~~~~~~~~~IGvLDI~GFE~--f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY 500 (837)
T 1kk8_A 424 GALAKSLYDRM-FNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEI--FDFNSFEQLCINYTNERLQQFFNHHMFILEQEEY 500 (837)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC--CSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhccCCCCCcceEEEEecCCccc--cccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHh
Confidence 99999999998 9999999985 235899999998653 6899999999999999999999999999999999
Q ss_pred HHcCCcccceeec-CCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 208 NKEGIRWRHIEFS-DNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 208 ~~Egi~~~~i~~~-~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
.+|||+|..|+|. ||++|+|||++ |.||..--.-.+.||+.+
T Consensus 501 ~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslLDEec~~p~~t 543 (837)
T 1kk8_A 501 KKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSILEEECMFPKAD 543 (837)
T ss_dssp HHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHHHHHTTCTTCC
T ss_pred hhcCCceeecccccCHHHHHHHHhc-CCcHHHHHHHHhcCCCCC
Confidence 9999999999995 99999999997 779988333345778743
No 19
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=99.94 E-value=4.5e-27 Score=215.23 Aligned_cols=99 Identities=24% Similarity=0.289 Sum_probs=88.8
Q ss_pred CCCCCCcceeecCCCCCCCccc--eEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRT--RLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALY 311 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~--~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~ 311 (357)
+|||+||||||||||+++...+ +++.+ .+.+++|++|||||+++|++||+|+|+++|++|+++|+
T Consensus 150 LG~G~DGH~as~fPg~~~~~~~~~~vv~~-------------~~~~~~P~~riTlt~~~I~~Ar~i~ll~~G~~Ka~av~ 216 (251)
T 3tx2_A 150 LGMGGEGHINSLFPHTDAVKETQRLVVAV-------------PDSPKPPPQRITLTLPAIQRSREVWLVVSGEAKADAVA 216 (251)
T ss_dssp ECCCTTCCBTTBCTTCHHHHCSSCSEEEE-------------SCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHH
T ss_pred ECCCCCCceEEcCCcChhhccCcceEEEe-------------cCCCCCCCcEEEECHHHHHhcCeEEEEEeCHHHHHHHH
Confidence 3999999999999998754444 45554 25678899999999999999999999999999999999
Q ss_pred HHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 312 KAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 312 ~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
++++|+++.++|||+++.|++++||+|++||+.|
T Consensus 217 ~~l~g~~~~~~Pas~l~~h~~~~~~~D~~Aa~~L 250 (251)
T 3tx2_A 217 AAVGGADPVDVPAAGAKGIERTVWLLDEAAASQL 250 (251)
T ss_dssp HHHTTCCTTTSGGGGCCCSSEEEEEEETTTTTTC
T ss_pred HHHhCCCCCCCChHHhccCCCEEEEEeHHHHhhc
Confidence 9999998889999999999999999999999876
No 20
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=99.94 E-value=1.7e-27 Score=222.74 Aligned_cols=166 Identities=16% Similarity=0.200 Sum_probs=130.0
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhcc-CCCCCccccccchH--------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDF-KPGPDNYFVLGLPT-------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~-~~~~~~~~~~gl~~-------------------------------------- 41 (357)
|++++++|.+++++.+|++|.+.|... ...++..+++|+++
T Consensus 27 Mkiii~~d~~~ls~~aA~~i~~~I~~~~~~~~~~~~~l~LsgGsTP~~ly~~L~~~~~~~idw~~V~~f~~DEr~vp~d~ 106 (312)
T 3e15_A 27 VKYLEAKDLTDFNQKSAYYICHQIAEKQLSKEGGHVVIGLSGGKTPIDVYKNIALVKDIKIDTSKLIFFIIDERYKRDDH 106 (312)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEECCSHHHHHHHHHHTTCCSSCCCGGGCEEEESEEECCTTCC
T ss_pred eeEEEeCCHHHHHHHHHHHHHHHHHhhhhhhhCCCEEEEEeCCCCHHHHHHHHHHhhccCCCccceEEEEeeeecCCCCC
Confidence 799999999999999999999988752 01222223333222
Q ss_pred ----------------------------------HHHHHHHHHH----HhCCeeEEEEeecCCCcccccCCCCCCCC---
Q psy2118 42 ----------------------------------ECVQYEKDIK----EAGGIHLFVGGIGPDGHIAFNEPGSSLAS--- 80 (357)
Q Consensus 42 ----------------------------------~~~~y~~~i~----~~~~~DlvllGiG~dGHiaf~~p~~~~~~--- 80 (357)
+|++|++.|+ ..++||++|||||+|||||||||++++.+
T Consensus 107 ~~Sn~~~~~~l~~~v~i~~~~~i~~~~g~~d~~~~a~~Ye~~I~~~~~~~g~~DL~LLGiG~DGHiaslfPg~~~~~~~~ 186 (312)
T 3e15_A 107 KFSNYNNIKFLFESLKINEKEQLYRPDTSKNIVECVRDYNEKIKNMVKKYTKVDIAILGMGSDFHIASLFPNIFFNIYMN 186 (312)
T ss_dssp TTCHHHHHHHHHHHTTCCHHHHEECCCTTSCHHHHHHHHHHHHHHHHHHHCSCCEEEECCCTTSCBTTBCSSHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCCCccccEEcCCCCcCHHHHHHHHHHHHHHHHhhcCCCcEEEEccCCCCceeecCCCCccccccc
Confidence 6889999986 56899999999999999999999975422
Q ss_pred ---CceEEecchHHHH--------------H--HhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHH
Q psy2118 81 ---RTRLKTLAQETLE--------------A--NARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAV 141 (357)
Q Consensus 81 ---~~~v~~~~~~~~~--------------~--~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l 141 (357)
.+++. .+.++. . ..++++.+.+.+|.+|||||+++|++|++++++++|++|+++|++++
T Consensus 187 ~~~~t~~l--~e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~~~l 264 (312)
T 3e15_A 187 NYQNSYIY--DESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWKNML 264 (312)
T ss_dssp HTGGGSSS--CGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHHHHH
T ss_pred ccccceee--cHHHHHHhhcccccccccccccccceeeccCCCCCCCeEEEecHHHHhcCCeEEEEEcChHHHHHHHHHH
Confidence 33321 122211 0 12456667777789999999999999999999999999999999999
Q ss_pred h-cCCcc---cceecccccccceEEEeccch
Q psy2118 142 E-EGVNH---MWTVSAFQMHPCTIMICDEDA 168 (357)
Q Consensus 142 ~-~~~~~---~~pv~~l~~~~~~i~ilD~~a 168 (357)
+ ++.+. .||++.|+.|+++++++|.++
T Consensus 265 ~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~ 295 (312)
T 3e15_A 265 LKSYVDVNYCLYPAVYLIDSMNTTVVTCGYT 295 (312)
T ss_dssp HHTTTTCCTTTCHHHHHHHTSCEEEEEESCT
T ss_pred HhCCCCCCcCccchHHHhhCCCEEEEEcCCc
Confidence 9 77655 899999999999999999865
No 21
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=99.93 E-value=2.7e-27 Score=214.30 Aligned_cols=149 Identities=15% Similarity=0.176 Sum_probs=120.3
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.+++++.+|++|.+.+++++.. +..+++++++
T Consensus 6 m~~~i~~~~~~l~~~~A~~i~~~i~~~i~~-~~~~~l~lsgGstp~~~y~~L~~~~idw~~v~~f~~DEr~vp~~~~~Sn 84 (233)
T 3nwp_A 6 TVFKSFDTPSALEQQLASKIASQLQEAVDA-RGKASLVVSGGSTPLKLFQLLSMKSIDWSDVYITLADERWVEADADASN 84 (233)
T ss_dssp CCEEEESSHHHHHHHHHHHHHHHHHHHHHH-HSCEEEEECCSSTTHHHHHHHHHCCSCGGGEEEEESEEESSCTTSTTCH
T ss_pred eEEEEECCHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEEcCCCCHHHHHHHHHhcCCChhHeEEEeCeecccCCCChHHH
Confidence 789999999999999999998887765422 2233333322
Q ss_pred ------------------------------HHHHHHHHHHHhC-CeeEEEEeecCCCcccccCCCCCCCCCceEEecchH
Q psy2118 42 ------------------------------ECVQYEKDIKEAG-GIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQE 90 (357)
Q Consensus 42 ------------------------------~~~~y~~~i~~~~-~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~ 90 (357)
+|++|++.|++++ +||++|||||.|||||||||+++. +++.
T Consensus 85 ~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~ye~~i~~~~~~~Dl~lLG~G~dGHias~fPg~~~--------L~~~ 156 (233)
T 3nwp_A 85 ERLVREHLLQNRASNAKFRGLKNMFSTAEAGADMAAESLSNFPRPFDVVVLGMGNDGHTCSWFPCSAE--------LENA 156 (233)
T ss_dssp HHHHHHHTSSGGGGGSEECCSCCSSSSHHHHHHHHHHHTTTSCSSBSEEEECCCTTSCBTTBCTTCTT--------HHHH
T ss_pred HHHHHHHhhccCCccceEEcCCCCCCCHHHHHHHHHHHHHhcCCCCCEEEEccCCCCCeeecCCCCch--------hhhh
Confidence 7999999999998 999999999999999999999762 1111
Q ss_pred HHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccc
Q psy2118 91 TLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPC 159 (357)
Q Consensus 91 ~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~ 159 (357)
+ ....+++.++.+++|++|||||+++|++||+++++++|++|++++++++.+..+..+|++.++.|++
T Consensus 157 ~-~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g~~~~~~Pas~l~~h~~ 224 (233)
T 3nwp_A 157 L-TTQALCVATNPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRK 224 (233)
T ss_dssp H-HCCSSEEEECCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSS
T ss_pred c-ccCceEEECCCCCCCCceEECCHHHHHhhCeEEEEEECHHHHHHHHHHHhCCCCCCccHHHHHhCCC
Confidence 1 1011344445678889999999999999999999999999999999999987777899999998764
No 22
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=99.93 E-value=7.2e-29 Score=266.59 Aligned_cols=198 Identities=29% Similarity=0.398 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++.+|.+...++. +| =-+|+||+|.||+.|...+. +.+.+ ..+.+.+..++.+||+++..+ ...+
T Consensus 301 D~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~---~~~~~-~~~~~~l~~~a~LLgv~~~~L-~~~l 375 (1080)
T 2dfs_A 301 DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDS---DSCAI-PPKHDPLTIFCDLMGVDYEEM-AHWL 375 (1080)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEETT---TEEEC-CSSCHHHHHHHHHHTCCHHHH-HHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCceEEecCC---cceee-cCChHHHHHHHHHhCCCHHHH-HHHh
Confidence 4566666655542 22 12889999999999964322 12222 135567888999999988777 3444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc-------ccceEEEeccchhhhhhccccchh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM-------HPCTIMICDEDATQELRVKTVNFE 180 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~-------~~~~i~ilD~~a~~~l~~~~n~fe 180 (357)
|. +.+......+...... ..+|+|+|+||+++ |+|+|.+||. ...+|++||++|++. |+.||||
T Consensus 376 ~~--~~~~~~~e~i~~~~~~~qa~~~rdalak~lY~~L-F~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~--f~~NsFE 450 (1080)
T 2dfs_A 376 CH--RKLATATETYIKPISKLHAINARDALAKHIYANL-FNWIVDHVNKALHSTVKQHSFIGVLDIYGFET--FEINSFE 450 (1080)
T ss_dssp HE--EEECC----EEEECCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCSSCCCEEEEEEEECCCCC--CSSBCHH
T ss_pred cc--cEEEeCCceEEeCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhccccccCceEEeeccCCccc--cCcCCHH
Confidence 33 3444344444333222 34799999999998 9999999986 235899999999664 6899999
Q ss_pred hHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeecCCcceeeeecCCCCCCCCCcceeecCCCCC
Q psy2118 181 QLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 181 q~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~~n~~~~~ll~~~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||+|||+|++++|+.||++|.+|||+|..|.|.||.+|+|||+++ .||..--.-.+.||+..
T Consensus 451 QlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLdee~~~p~~t 519 (1080)
T 2dfs_A 451 QFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGS 519 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHHHHTTSTTCC
T ss_pred HHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-CceeeeccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999998 78888333445788744
No 23
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=99.93 E-value=4.8e-27 Score=212.69 Aligned_cols=149 Identities=15% Similarity=0.168 Sum_probs=118.6
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccc-----------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGL----------------------------------------- 39 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl----------------------------------------- 39 (357)
|++++|+|.+++++.+|++|.+.+++++..+ ..+++++
T Consensus 3 m~i~i~~~~~~l~~~~A~~i~~~i~~~i~~~-~~~~l~lsgGstp~~~y~~L~~~~i~w~~v~~f~~DEr~vp~~~~~Sn 81 (232)
T 3lhi_A 3 FVWHEYENAAEAAQSLADAVADALQGALDEK-GGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTNHADSN 81 (232)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHH-SCEEEEECCSSTTHHHHHHHHTSCCCGGGEEEEESEEESSCTTSTTCH
T ss_pred eEEEEeCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEeCCCCHHHHHHHHHhcCCCchheEEEEeeeccCCCCChHHH
Confidence 7899999999999999999988777643221 1112111
Q ss_pred ----------------------------h--HHHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecch
Q psy2118 40 ----------------------------P--TECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQ 89 (357)
Q Consensus 40 ----------------------------~--~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~ 89 (357)
. .+|++|++.|+++++||++|||||.|||||||||+++..+ +
T Consensus 82 ~~~~~~~ll~~~~~~~~~~p~~~~~~~~~~~~~~~~ye~~i~~~~~~Dl~lLG~G~dGH~as~fPg~~~l~--------~ 153 (232)
T 3lhi_A 82 TGLVREYLLKNKAAAAVWIPMVEDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQ--------T 153 (232)
T ss_dssp HHHHHHHTSSGGGGGSEECCSSCTTCCGGGCCHHHHHHHHHHHCCCCSEEEECCCTTSCBTTBCTTCTTHH--------H
T ss_pred HHHHHHHhccCCCccceEecCCCCCCChhhHHHHHHHHHHHhhCCCCCEEEEccCCCCCeeecCCCChhhh--------h
Confidence 2 4689999999999999999999999999999999986421 1
Q ss_pred HHHHHHh-cccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccc
Q psy2118 90 ETLEANA-RFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPC 159 (357)
Q Consensus 90 ~~~~~~a-~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~ 159 (357)
.+..... +++..+++++|++|||||+++|++||+++++++|++|++++++++.+ .+..+|++.++.|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~l~g-~~~~~Pas~l~~h~~ 223 (232)
T 3lhi_A 154 AIDGSAGVALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQG-ENREYPISLVLNHQG 223 (232)
T ss_dssp HHCCTTCCCEEEECCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTS-CCTTSTHHHHHTSTT
T ss_pred hhccccCcEEEeCCCCCCCCceEEecHHHHHhcCeEEEEEECHHHHHHHHHHHhC-CCccCcHHHHHhCCC
Confidence 1100111 34545678889999999999999999999999999999999999997 557899999999875
No 24
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=99.93 E-value=2.6e-25 Score=205.65 Aligned_cols=173 Identities=63% Similarity=1.029 Sum_probs=146.6
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCCCccccccchH---------------------------------------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGPDNYFVLGLPT--------------------------------------- 41 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~~--------------------------------------- 41 (357)
|++++|+|.+++++.+|++|.+.++++++..+..+++|+++
T Consensus 1 m~~~~~~~~~~l~~~aA~~l~~~l~~~~~~~~~~~~i~lsgGsTp~~~~~~L~~~~~~~~~~~~~v~v~~ldEr~gv~~~ 80 (266)
T 1fs5_A 1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKE 80 (266)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHHhhhcccCceEEEEcCCCCHHHHHHHHHHHhhcCCCChHHeEEEeCeeccCCCCC
Confidence 89999999999999999999999987442222112211111
Q ss_pred ------------------------------------HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEE
Q psy2118 42 ------------------------------------ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLK 85 (357)
Q Consensus 42 ------------------------------------~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~ 85 (357)
+|..|++.|+..+++|++|+|||.|||++|+||++++.+.++++
T Consensus 81 ~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~~~~e~~~~~y~~~l~~~~~~Dl~llGiG~dGh~asl~pg~~~~~~~~~~ 160 (266)
T 1fs5_A 81 HPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK 160 (266)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHHCCCSEEEECCCTTCCSTTCCSSCCTTCCSEEE
T ss_pred CHHHHHHHHHHHhhccCCCCHHHEEeCCCCCCCHHHHHHHHHHHHHhcCCCCEEEEccCCCCCeeecCCCCCCCccccEE
Confidence 58899999999999999999999999999999998777778888
Q ss_pred ecchHHHHHHhcccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEec
Q psy2118 86 TLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICD 165 (357)
Q Consensus 86 ~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD 165 (357)
.+...+....+++|..+.+.+|..+||+|++.|+++++++++++|++|++++.+++.++....+|++.++.|++++|++|
T Consensus 161 ~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~li~D 240 (266)
T 1fs5_A 161 TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCD 240 (266)
T ss_dssp ECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEEEC
T ss_pred EechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEEEEecChHHHHHHHHHhcCCCCCcCChHHHccCCCEEEEEe
Confidence 88887777777888666666777788888899999999999999999999999999988767899999999999999999
Q ss_pred cchhhhhh
Q psy2118 166 EDATQELR 173 (357)
Q Consensus 166 ~~a~~~l~ 173 (357)
+.++..+.
T Consensus 241 ~~aA~~L~ 248 (266)
T 1fs5_A 241 EPSTMELK 248 (266)
T ss_dssp SGGGTTSB
T ss_pred HHHhhhcc
Confidence 99988764
No 25
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=99.93 E-value=3.4e-28 Score=259.53 Aligned_cols=200 Identities=25% Similarity=0.367 Sum_probs=149.2
Q ss_pred HHHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccc
Q psy2118 41 TECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEA 110 (357)
Q Consensus 41 ~~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~r 110 (357)
.++++|.+...++. +| =-+|+||+|.||+.|...+.. + .....+.+.+..++.+||+++..+ ...
T Consensus 295 dD~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhlGni~F~~~~~~--~--~~~~~~~~~l~~~a~LLgv~~~~L-~~~ 369 (995)
T 2ycu_A 295 QERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNT--D--QATMPDNTAAQKLCRLLGLGVTDF-SRA 369 (995)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHGGGCCCEECSSS--C--CEECSCCHHHHHHHHHTTCCHHHH-HHH
T ss_pred cHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhhccceEeecCCC--c--ccccCChHHHHHHHHHHCCCHHHH-HHH
Confidence 45566666655543 22 128899999999999543211 1 122335567888999999988776 334
Q ss_pred eecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc--------ccceEEEeccchhhhhhccccc
Q psy2118 111 LTVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM--------HPCTIMICDEDATQELRVKTVN 178 (357)
Q Consensus 111 iTlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~--------~~~~i~ilD~~a~~~l~~~~n~ 178 (357)
+|. +.+...+..+...... ..+|+|+|+||+++ |+|+|.+||. ...+|++||++|++. |+.|+
T Consensus 370 l~~--~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~L-F~wlV~~iN~~l~~~~~~~~~~IgvLDI~GFE~--f~~Ns 444 (995)
T 2ycu_A 370 LLT--PRIKVGRDYVQKAQTKEQADFALEALAKATYERL-FRWLVLRLNRALDRSPRQGASFLGILDIAGFEI--FQLNS 444 (995)
T ss_dssp HHS--CEEESSSSEEECCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCSCCCSEEEEEEECCCBCC--CSSBC
T ss_pred hcC--cEEEcCCceecCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCCCccceEEEeccccccc--cccch
Confidence 433 3333333433332222 34799999999998 9999999985 235899999998653 68999
Q ss_pred hhhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceee-cCCcceeeeecC--CCCCCCCCcceeecCCCCC
Q psy2118 179 FEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 179 feq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~-~~n~~~~~ll~~--~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||||||+|++++|+.||++|.+|||+|..|.| .||++|+|||++ +|.||..--.-.+.||+.+
T Consensus 445 fEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~lLdee~~~p~~t 519 (995)
T 2ycu_A 445 FEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKAT 519 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHHHHHHSSSSTTCC
T ss_pred HHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchhhhhHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999 599999999998 4889988333345678743
No 26
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=99.93 E-value=2.5e-28 Score=260.40 Aligned_cols=198 Identities=27% Similarity=0.428 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
++++|.+...++. +| =-+|+||+|.||+.|..-+. +.+. ..+.+.+..++.+||+++..+ ...+
T Consensus 320 D~~~f~~~~~A~~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~---~~~~--~~~~~~l~~~a~LLgv~~~~L-~~~l 393 (1010)
T 1g8x_A 320 DEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAG---EGAV--LKDKTALNAASTVFGVNPSVL-EKAL 393 (1010)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTTCCCBCCTT---SSCB--CSCCHHHHHHHHHHTSCHHHH-HHHH
T ss_pred hHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhccceEEecCC---Cccc--cCChHHHHHHHHHHCCCHHHH-HHHH
Confidence 4556665555442 22 12889999999999864322 2222 234567888999999988776 3444
Q ss_pred ecchhhhhccceEEEeeCCc----hhHHHHHHHHhcCCcccceeccccc------ccceEEEeccchhhhhhccccchhh
Q psy2118 112 TVGVGTVMDAQEVMILITGS----HKAFALYKAVEEGVNHMWTVSAFQM------HPCTIMICDEDATQELRVKTVNFEQ 181 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G~----~Kadal~k~l~~~~~~~~pv~~l~~------~~~~i~ilD~~a~~~l~~~~n~feq 181 (357)
|. +.+...+..+...... ..+|+|+|+||+++ |+|+|.+||. ...+|++||++|++. |+.|+|||
T Consensus 394 ~~--~~~~~~~e~v~~~~~~~qa~~~rdalak~lY~~L-F~wlV~~IN~~l~~~~~~~~IgvLDI~GFE~--f~~NsfEQ 468 (1010)
T 1g8x_A 394 ME--PRILAGRDLVAQHLNVEKSSSSRDALVKALYGRL-FLWLVKKINNVLCSERKAYFIGVLDISGFEI--FKVNSFEQ 468 (1010)
T ss_dssp HS--CEEESSSSEEECCCCSHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCSSCSEEEEEEECCCCCC--CSSBCHHH
T ss_pred hC--cEEEeCCeeEEeCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCcCceeeeccCccccc--CCcCcHHH
Confidence 43 3333333443322222 34799999999998 9999999986 245899999998653 68999999
Q ss_pred HHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeec-CCcceeeeecC-CCCCCCCCcceeecCCCCC
Q psy2118 182 LCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEG-KPNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 182 ~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~-~n~~~~~ll~~-~~~G~~~dGH~a~~~P~~~ 250 (357)
|||||||||||++|++++|+.||++|.+|||+|..|.|. ||++|+|||++ +|.||..--.-.+.||+.+
T Consensus 469 lcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~lLdee~~~p~~t 539 (1010)
T 1g8x_A 469 LCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNAT 539 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHHHHHHTTSSSCC
T ss_pred HHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeehhhhHHhCCCCCC
Confidence 999999999999999999999999999999999999995 99999999998 4889998333345788743
No 27
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=99.93 E-value=9.8e-26 Score=210.80 Aligned_cols=127 Identities=78% Similarity=1.168 Sum_probs=116.4
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+||||||+.+.+.++++.+...+...+.++|+.+.+.+|..+||||++.|++|++++++++|
T Consensus 131 ~Dl~lL-----GiG~dGH~aslfPg~~l~~~~~~~~L~~~~~~~~~~~f~~~~~~vp~~~iTl~l~~l~~a~~vi~la~G 205 (289)
T 1ne7_A 131 IELFVG-----GIGPDGHIAFNEPGSSLVSRTRVKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITG 205 (289)
T ss_dssp CSEEEE-----CCCTTCCSTTCCTTCCTTCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECS
T ss_pred CCEEEE-----ccCCCCcceecCCCCCCccccceEEcchhhhhhhhccccCCCCCCCCEEEECCHHHHhcCCEEEEEEcC
Confidence 456666 999999999999999888888999988888778889997677888999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhccc
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKV 355 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~~ 355 (357)
++|+++++++++|+...++|+|+++.|++++||+|++||+.|++++.+||+.
T Consensus 206 ~~Ka~ai~~al~g~~~~~~Pas~l~~h~~~~li~D~~aA~~L~~~~~~~~~~ 257 (289)
T 1ne7_A 206 AHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKG 257 (289)
T ss_dssp GGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEEEEGGGGTTSBHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCccCchHHHccCCCEEEEEcHHHHhhcccchhhhhHH
Confidence 9999999999999887789999999999999999999999998888888873
No 28
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=99.93 E-value=8.7e-25 Score=199.34 Aligned_cols=130 Identities=38% Similarity=0.670 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhhhcc
Q psy2118 42 ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDA 121 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i~~a 121 (357)
+|..|++.|+..+++|++|+|||.|||++|+||++++.+.+++..+.+.+....++++. +.+.+|.+|||+|++.|+++
T Consensus 112 ~~~~y~~~i~~~~~~Dl~llGiG~dgh~a~l~p~~~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~p~~~itltl~~l~~a 190 (242)
T 2bkx_A 112 ECRRYEQLVDSLGDTDIQLLGIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFP-SIDSVPKKALTMGIQTILSS 190 (242)
T ss_dssp HHHHHHHHHHHTTSCSEEEECCCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGGSS-SGGGSCSEEEECCHHHHHTS
T ss_pred HHHHHHHHHHhcCCCCEEEECcCCCCcceeCCCCCccccCceEEeCCHHHHHHHhhhcC-CCCCCCCccEEcCHHHHhhc
Confidence 67899999999889999999999999999999998887788888888877665567776 35567889999999999999
Q ss_pred ceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 122 QEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 122 ~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
++++++++|++|++++.+++.++.+..+|++.++.|++++|++|+.+++++
T Consensus 191 ~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 241 (242)
T 2bkx_A 191 KRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLR 241 (242)
T ss_dssp SCEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred CEEEEEEeChHHHHHHHHHHcCCCCCcccHHHhccCCCEEEEEchHHhccC
Confidence 999999999999999999999887678999999999999999999988754
No 29
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=99.93 E-value=1.4e-25 Score=204.09 Aligned_cols=118 Identities=15% Similarity=0.168 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHh-------CCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccceecc
Q psy2118 42 ECVQYEKDIKEA-------GGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVG 114 (357)
Q Consensus 42 ~~~~y~~~i~~~-------~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt 114 (357)
+|++|++.|+.. ++||++|+|||.||||||+||++ +.+.++++.. +. +.+++|.+|||||
T Consensus 111 ~~~~y~~~l~~~~~~~~~~~~~Dl~lLGiG~dGH~aslfP~~-l~~~~~~v~~----------~~--~~~~~p~~rITlt 177 (238)
T 1y89_A 111 EAERFAQAMAHVIPTENGTPVFDWILLGVGADGHTASLFPGQ-TDYADANLSV----------VA--SHPESGQLRVSKT 177 (238)
T ss_dssp HHHHHHHHHHHHSCEETTEECCSEEEECCCTTSCBTTBCTTT-CCTTCCSSEE----------EE--ECTTTCCEEEEEC
T ss_pred HHHHHHHHHHHhhcccCCCCCCCEEEECCCCCCceeecCCCC-CCCCCcEEEe----------cc--CCCCCCCCeEECC
Confidence 789999999987 26999999999999999999998 6655553321 11 2245688999999
Q ss_pred hhhhhccceEEEeeCCchhHHHHHHHHhcC-Ccccceeccccc-ccceEEEeccchhhhh
Q psy2118 115 VGTVMDAQEVMILITGSHKAFALYKAVEEG-VNHMWTVSAFQM-HPCTIMICDEDATQEL 172 (357)
Q Consensus 115 ~~~i~~a~~i~~~~~G~~Kadal~k~l~~~-~~~~~pv~~l~~-~~~~i~ilD~~a~~~l 172 (357)
++.|++|++++++++|++|++++++++.++ .+..||++.++. |++++|++|+.++.++
T Consensus 178 l~~i~~a~~vi~~a~G~~Ka~ai~~~l~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l 237 (238)
T 1y89_A 178 AKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI 237 (238)
T ss_dssp HHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSSSEEEEEEEHHHHTTT
T ss_pred HHHHHhCCEEEEEEeCHHHHHHHHHHHhCCCCCccCCHHHHhcCCCCEEEEEChHHHhhc
Confidence 999999999999999999999999999984 557899999999 7999999999987654
No 30
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=99.92 E-value=8.3e-25 Score=202.16 Aligned_cols=122 Identities=19% Similarity=0.245 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHhC-------------CeeEEEEeecCCCcccccCCCCCC-CCCceEEecchHHHHHHhcccCCCCCCC
Q psy2118 41 TECVQYEKDIKEAG-------------GIHLFVGGIGPDGHIAFNEPGSSL-ASRTRLKTLAQETLEANARFFDNDIKKV 106 (357)
Q Consensus 41 ~~~~~y~~~i~~~~-------------~~DlvllGiG~dGHiaf~~p~~~~-~~~~~v~~~~~~~~~~~a~~l~~~~~~~ 106 (357)
.+|.+|++.|+..+ +||++|||||.|||||||||+++. .+.++++.+ .++ .+.+++
T Consensus 128 ~~a~~Ye~~l~~~~~~~~~~~~~~~~p~~Dl~lLGiG~dGH~aslfP~~~~L~~~~~~v~~---------~~~-~~~~~~ 197 (267)
T 3css_A 128 AVAQDYEVKLLNCLPCKQINGTAKSVPVVDIVLLGFGSDGHTASIFPDSVAATDEEHVVSV---------SFP-SPTMSP 197 (267)
T ss_dssp HHHHHHHHHHHHHSCEEECTTSSCEEECCSEEEEECCTTSCBTTBCTTSGGGGCCSCSEEE---------ECC-CTTCSS
T ss_pred HHHHHHHHHHHHhcCccccccccCCCCCCCEEEECCCCCccceeCCCCCcccCCCCcEEEe---------ecc-cCCCCC
Confidence 45778999999864 699999999999999999999873 444443210 111 145677
Q ss_pred CccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccc-c-ccceEEEeccchhhhh
Q psy2118 107 PKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQ-M-HPCTIMICDEDATQEL 172 (357)
Q Consensus 107 p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~-~-~~~~i~ilD~~a~~~l 172 (357)
|.+|||||++.|++|++++++++|++|++++++++.+..+..||++.++ . |++++|++|..+++.+
T Consensus 198 p~~rITltl~~I~~A~~v~~la~G~~Ka~av~~~l~g~~~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l 265 (267)
T 3css_A 198 KVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGV 265 (267)
T ss_dssp CSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSCCSSCCGGGGGGGCSSEEEEEECTTTTTTT
T ss_pred CCceEECCHHHHHcCCEEEEEEeCHHHHHHHHHHHcCCCCCcCCHHHhccCCCCCEEEEECHHHHhhc
Confidence 8899999999999999999999999999999999998776789999999 7 8999999999988764
No 31
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=99.92 E-value=4.2e-24 Score=193.84 Aligned_cols=168 Identities=32% Similarity=0.478 Sum_probs=140.7
Q ss_pred CEEEEcCCHHHHHHHHHHHHHHHHhccCCCC-----C-------------------cccc--c---cch-----------
Q psy2118 1 MRLIILDDVSNVAEWSARYVLKKITDFKPGP-----D-------------------NYFV--L---GLP----------- 40 (357)
Q Consensus 1 m~~~~~~~~~~~~~~~a~~i~~~l~~~~~~~-----~-------------------~~~~--~---gl~----------- 40 (357)
|++++|+|.+++++.+|++|.+.++.. +.. + ..++ . |++
T Consensus 2 m~~~~~~~~~~l~~~aA~~l~~~i~~~-~~~i~ls~G~T~~~~~~~L~~~~~~~~~v~v~~ldEr~gv~~~~~~sn~~~~ 80 (234)
T 2ri0_A 2 MKTIKVKNKTEGSKVAFRMLEEEITFG-AKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQSYAYFM 80 (234)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHTT-CCEEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTSHHHHH
T ss_pred CeEEEeCCHHHHHHHHHHHHHHHHHhC-CCEEEEcCCCCHHHHHHHHHhcCCChhheEEEeCeeecCCCCCChHHHHHHH
Confidence 789999999999999999999998851 110 0 0000 0 111
Q ss_pred ------------------------HHHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHh
Q psy2118 41 ------------------------TECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANA 96 (357)
Q Consensus 41 ------------------------~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a 96 (357)
.+|..|++.|+. +++|++|+|||.|||++|+||++++.+.++++.+.+.+....+
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~i~~-~~~Dl~llGiG~dgh~a~l~p~~~~~~~~~~~~l~~~~~~~~~ 159 (234)
T 2ri0_A 81 KQNLFAAKPFKKSYLPNGLAADLAKETEYYDQILAQ-YPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANS 159 (234)
T ss_dssp HHHTTTTSCCSEEECCCTTCSCHHHHHHHHHHHHHH-SCCSEEEECCCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHH
T ss_pred HHHHhccCCCcHhhcCCCCCCCHHHHHHHHHHHHHh-CCCCEEEEccCCCCCchhcCCCCCCCCCceEEECCHHHHHHhh
Confidence 058899999999 8999999999999999999999877777788888877766667
Q ss_pred cccCCCCCCCCccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhh
Q psy2118 97 RFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 97 ~~l~~~~~~~p~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~ 171 (357)
++|..+ +.+|.+|||+|++.|++++++++++.|++|++++.+++.++.+..+|++.++.|++++|++|+.++.+
T Consensus 160 ~~fd~~-~~~~~~~itl~l~~l~~a~~vi~va~G~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~ 233 (234)
T 2ri0_A 160 RFFEKA-EDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAG 233 (234)
T ss_dssp TTCSCG-GGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEETTTTTT
T ss_pred hhcCCc-cCCCCceEEeCHHHHhhcCEEEEEEeChHHHHHHHHHHcCCCCCccchHHHhhCCCEEEEEchHHhcc
Confidence 888643 45789999999999999999999999999999999999988767899999999999999999988764
No 32
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=99.92 E-value=3.7e-27 Score=257.55 Aligned_cols=199 Identities=24% Similarity=0.382 Sum_probs=144.9
Q ss_pred HHHHHHHHHHHhC--Ce--------eEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHHHhcccCCCCCCCCccce
Q psy2118 42 ECVQYEKDIKEAG--GI--------HLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEAL 111 (357)
Q Consensus 42 ~~~~y~~~i~~~~--~~--------DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~ri 111 (357)
+...|.....++. +| =-+|+||+|.||+.|...+.. +.+. ..+.+.+..++.+||+++..+ ...+
T Consensus 327 d~~~f~~~~~a~~~lg~~~~e~~~i~~ilaaiLhlGni~f~~~~~~--~~~~--~~~~~~~~~~a~lLg~~~~~l-~~~l 401 (1184)
T 1i84_S 327 DDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNT--DQAS--MPDNTAAQKVCHLMGINVTDF-TRSI 401 (1184)
T ss_dssp HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTTCCCBCCTTT--SCCB--CCCSHHHHHHHHHTTSCHHHH-HHHH
T ss_pred hHHHHHHHHHHHHhceeCHHHHHHHHHHHHHHHhhcCceeeccCCC--cCcc--cCChHHHHHHHHHHCCCHHHH-HHHh
Confidence 4566666555542 22 127899999999998643211 1122 224567888999999988766 3344
Q ss_pred ecchhhhhccceEEEeeCC----chhHHHHHHHHhcCCcccceecccccc--------cceEEEeccchhhhhhccccch
Q psy2118 112 TVGVGTVMDAQEVMILITG----SHKAFALYKAVEEGVNHMWTVSAFQMH--------PCTIMICDEDATQELRVKTVNF 179 (357)
Q Consensus 112 Tlt~~~i~~a~~i~~~~~G----~~Kadal~k~l~~~~~~~~pv~~l~~~--------~~~i~ilD~~a~~~l~~~~n~f 179 (357)
|. +.+...+..+..... ...+|+|+|+||+++ |.|+|.+||.. ..+|++||++|++. |..|||
T Consensus 402 ~~--~~~~~~~e~~~~~~~~~~a~~~rdalak~lY~~l-F~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~--f~~Nsf 476 (1184)
T 1i84_S 402 LT--PRIKVGRDVVQKAQTKEQADFAIEALAKAKFERL-FRWILTRVNKALDKTKRQGASFLGILDIAGFEI--FEINSF 476 (1184)
T ss_dssp HS--CCCCCTTSCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHTTTCC------CEEEEEEECCCCCC--CSSBCH
T ss_pred cC--cEEEeCCceEecCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCccCCcceEEEeecCCcCC--CCcchH
Confidence 33 233322322221111 234799999999998 99999999861 34899999999664 689999
Q ss_pred hhHHhhhchhhhHHHHhhhcchhhHHHHHHcCCcccceeec-CCcceeeeecCC--CCCCCCCcceeecCCCCC
Q psy2118 180 EQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLVEGK--PNGIGPDGHIAFNEPGSS 250 (357)
Q Consensus 180 eq~~in~~nE~lq~~~~~~~f~~e~~~y~~Egi~~~~i~~~-~n~~~~~ll~~~--~~G~~~dGH~a~~~P~~~ 250 (357)
||||||||||+||+||++++|+.||++|.+|||+|..|.|. ||++|+|||+++ |.||..--.-.+.||+.+
T Consensus 477 eQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~lLdee~~~p~~t 550 (1184)
T 1i84_S 477 EQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKAT 550 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHHHHHHTTSCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchhhhhhhhCCCCCC
Confidence 99999999999999999999999999999999999999995 999999999873 238887323345678743
No 33
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=99.91 E-value=9.3e-25 Score=201.94 Aligned_cols=126 Identities=65% Similarity=1.021 Sum_probs=114.7
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+||||||+++.+.++++.+.+.+...+.+||+.+.+.+|..+||||++.|++|++++++++|
T Consensus 131 ~Dl~ll-----GiG~dGh~asl~pg~~~~~~~~~~~l~~~~~~~~~~~f~~~~~~~p~~~itl~l~~l~~a~~vi~va~G 205 (266)
T 1fs5_A 131 IHLFMG-----GVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLG 205 (266)
T ss_dssp CSEEEE-----CCCTTCCSTTCCSSCCTTCCSEEEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECS
T ss_pred CCEEEE-----ccCCCCCeeecCCCCCCCccccEEEechhhhhhhhccccCCcCCCCcEEEECChHHHhcCCEEEEEecC
Confidence 455666 999999999999998888888999998888888889997666777888899999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhhhhhhhhcc
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 354 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~~~~~~~~~ 354 (357)
++|+++++++++|+.+.++|+++++.|++++||+|++||+.|+.++.+||+
T Consensus 206 ~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~li~D~~aA~~L~~~~~~~~~ 256 (266)
T 1fs5_A 206 SQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFN 256 (266)
T ss_dssp GGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEEECSGGGTTSBHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCCCcCChHHHccCCCEEEEEeHHHhhhcccchHHHhh
Confidence 999999999999987778999999999999999999999999988888987
No 34
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=99.91 E-value=2.2e-25 Score=201.67 Aligned_cols=107 Identities=19% Similarity=0.271 Sum_probs=95.2
Q ss_pred HHHHHHHHHHH-hCCeeEEEEeecCCCcccccCC-CCCC-CCCceEEecchHHHHHHhcccCCCCCCCCccceecchhhh
Q psy2118 42 ECVQYEKDIKE-AGGIHLFVGGIGPDGHIAFNEP-GSSL-ASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTV 118 (357)
Q Consensus 42 ~~~~y~~~i~~-~~~~DlvllGiG~dGHiaf~~p-~~~~-~~~~~v~~~~~~~~~~~a~~l~~~~~~~p~~riTlt~~~i 118 (357)
+|.+|++.|+. .++||++|||||.||||||||| +++. .+.++++. +.+++|.+|||||++.|
T Consensus 123 ~~~~y~~~i~~~~~~~Dl~lLGiG~dGH~aslfP~g~~~l~~~~~~v~---------------~~~~~p~~rITltl~~I 187 (232)
T 1vl1_A 123 ACEKYEREIRSATDQFDLAILGMGPDGHVASIFDLETGNKDNLVTFTD---------------PSGDPKVPRVTLTFRAL 187 (232)
T ss_dssp HHHHHHHHHHHHCSSCSEEEECCCTTSCBTTBCSHHHHTCSSSEEECS---------------SBTTTTBCEEEECHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEecCCCCchhhccCCCCcccccCCcEEe---------------cCCCCCCCEEECCHHHH
Confidence 78999999998 8899999999999999999999 8764 55555442 34678899999999999
Q ss_pred hccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEecc
Q psy2118 119 MDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDE 166 (357)
Q Consensus 119 ~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~ 166 (357)
++|++++++++|++|++++++++.+. .||++.++.|++++|++|+
T Consensus 188 ~~A~~iilla~G~~Ka~av~~~l~g~---~~Pas~l~~h~~~~~~~D~ 232 (232)
T 1vl1_A 188 NTSLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK 232 (232)
T ss_dssp TTCSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred HhCCEEEEEEcCHHHHHHHHHHHhCC---CCChHHhCcCCCEEEEeCC
Confidence 99999999999999999999999873 4999999999999999995
No 35
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogen protozoa consortium, SGPP, leish hydrolase; 1.70A {Leishmania braziliensis} PDB: 3ch7_A
Probab=99.91 E-value=4.1e-25 Score=204.25 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=89.2
Q ss_pred CCCCCCCcceeecCCCCC-CCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHH
Q psy2118 233 PNGIGPDGHIAFNEPGSS-LASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALY 311 (357)
Q Consensus 233 ~~G~~~dGH~a~~~P~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~ 311 (357)
.+|||+||||||||||++ +...++++.+ .+| .+.+++|++|||||+++|++||+|+++++|++|+++|+
T Consensus 160 lLGiG~dGH~aslfP~~~~L~~~~~~v~~---------~~~-~~~~~~p~~rITltl~~I~~A~~v~~la~G~~Ka~av~ 229 (267)
T 3css_A 160 LLGFGSDGHTASIFPDSVAATDEEHVVSV---------SFP-SPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVR 229 (267)
T ss_dssp EEECCTTSCBTTBCTTSGGGGCCSCSEEE---------ECC-CTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHH
T ss_pred EECCCCCccceeCCCCCcccCCCCcEEEe---------ecc-cCCCCCCCceEECCHHHHHcCCEEEEEEeCHHHHHHHH
Confidence 349999999999999977 4555554331 121 14577889999999999999999999999999999999
Q ss_pred HHHhcCCCcccchhhhc-c-CCcEEEEeeHHHHhhhh
Q psy2118 312 KAVEEGVNHMWTVSAFQ-M-HPCTIMICDEDATQELR 346 (357)
Q Consensus 312 ~~l~~~~~~~~Pa~~~~-~-~~~~~~~~D~~aa~~l~ 346 (357)
++++|+++.++|||+++ . |++++||+|++||+.|.
T Consensus 230 ~~l~g~~~~~~Pas~l~~~~h~~~~~~~D~~Aa~~l~ 266 (267)
T 3css_A 230 GVLSESPTDPLPVSRFLRDCRGSVTLLLDPGAGEGVC 266 (267)
T ss_dssp HHHCSSCCSSCCGGGGGGGCSSEEEEEECTTTTTTTC
T ss_pred HHHcCCCCCcCCHHHhccCCCCCEEEEECHHHHhhcc
Confidence 99999888889999999 8 99999999999998763
No 36
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=99.91 E-value=3.9e-24 Score=195.02 Aligned_cols=117 Identities=40% Similarity=0.675 Sum_probs=106.3
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+||||||+++.+.++++.+.+.+...+.++|+ ..+++|.+|||||++.|++|++++++++|
T Consensus 126 ~Dl~ll-----GiG~dgh~a~l~p~~~~~~~~~~~~L~~~~~~~~~~~~~-~~~~~p~~~itltl~~l~~a~~vi~va~G 199 (242)
T 2bkx_A 126 TDIQLL-----GIGRNGHIGFNEPGTSFKSRTHVVTLNEQTRQANARYFP-SIDSVPKKALTMGIQTILSSKRILLLISG 199 (242)
T ss_dssp CSEEEE-----CCCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHGGGSS-SGGGSCSEEEECCHHHHHTSSCEEEEECS
T ss_pred CCEEEE-----CcCCCCcceeCCCCCccccCceEEeCCHHHHHHHhhhcC-CCCCCCCccEEcCHHHHhhcCEEEEEEeC
Confidence 456666 999999999999998888888988898888777788997 45678899999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
++|+++++++++|+++.++|||+++.|++++||+|++||+.|+
T Consensus 200 ~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l~ 242 (242)
T 2bkx_A 200 KSKAEAVRKLLEGNISEDFPASALHLHSDVTVLIDREAASLRP 242 (242)
T ss_dssp GGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEETTTTTTCC
T ss_pred hHHHHHHHHHHcCCCCCcccHHHhccCCCEEEEEchHHhccCC
Confidence 9999999999999888899999999999999999999998763
No 37
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism,; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=99.90 E-value=4.9e-24 Score=193.45 Aligned_cols=116 Identities=38% Similarity=0.659 Sum_probs=104.9
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-++ |||+|||+||||||.++.+.++++.+.+.+...+.+||+.. +.+|.+|||||++.|++|++++++++|
T Consensus 119 ~Dl~ll-----GiG~dgh~a~l~p~~~~~~~~~~~~l~~~~~~~~~~~fd~~-~~~~~~~itl~l~~l~~a~~vi~va~G 192 (234)
T 2ri0_A 119 IDLQIL-----GIGRNAHIGFNEPGTAFSSQTHLVDLTPSTIAANSRFFEKA-EDVPKQAISMGLASIMSAKMILLMAFG 192 (234)
T ss_dssp CSEEEE-----CCCTTSCBTTBCTTCCTTCCSEEEECCHHHHHHHHTTCSCG-GGSCCEEEECCHHHHHTSSEEEEEECS
T ss_pred CCEEEE-----ccCCCCCchhcCCCCCCCCCceEEECCHHHHHHhhhhcCCc-cCCCCceEEeCHHHHhhcCEEEEEEeC
Confidence 456666 99999999999999888888888888888877889999743 557899999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
++|+++++++++|+++.++|||+++.|++++||+|++||+.|
T Consensus 193 ~~Ka~ai~~al~g~~~~~~Pas~l~~~~~~~~~~D~~Aa~~l 234 (234)
T 2ri0_A 193 EEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVDEKAGAGI 234 (234)
T ss_dssp GGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEETTTTTTC
T ss_pred hHHHHHHHHHHcCCCCCccchHHHhhCCCEEEEEchHHhccC
Confidence 999999999999998889999999999999999999999864
No 38
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=99.90 E-value=2.4e-24 Score=195.97 Aligned_cols=99 Identities=17% Similarity=0.167 Sum_probs=87.2
Q ss_pred CCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKA 313 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~ 313 (357)
+|||+|||+||||||+ +.+.++++.. ++ +.+++|++|||||++.|++||+|+++++|++|+++++++
T Consensus 137 LGiG~dGH~aslfP~~-l~~~~~~v~~----------~~--~~~~~p~~rITltl~~i~~a~~vi~~a~G~~Ka~ai~~~ 203 (238)
T 1y89_A 137 LGVGADGHTASLFPGQ-TDYADANLSV----------VA--SHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQI 203 (238)
T ss_dssp ECCCTTSCBTTBCTTT-CCTTCCSSEE----------EE--ECTTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHH
T ss_pred ECCCCCCceeecCCCC-CCCCCcEEEe----------cc--CCCCCCCCeEECCHHHHHhCCEEEEEEeCHHHHHHHHHH
Confidence 3999999999999998 7777665442 11 235678999999999999999999999999999999999
Q ss_pred HhcC-CCcccchhhhcc-CCcEEEEeeHHHHhhh
Q psy2118 314 VEEG-VNHMWTVSAFQM-HPCTIMICDEDATQEL 345 (357)
Q Consensus 314 l~~~-~~~~~Pa~~~~~-~~~~~~~~D~~aa~~l 345 (357)
++++ ++.++|||+++. |++++||+|++||+.|
T Consensus 204 l~~~~~~~~~Pas~l~~~~~~~~~~~D~~Aa~~l 237 (238)
T 1y89_A 204 HTTPAEQLPYPAAKIHSTSGVTEWYLDSDAAAKI 237 (238)
T ss_dssp HHSCGGGCCCHHHHCCCSSSEEEEEEEHHHHTTT
T ss_pred HhCCCCCccCCHHHHhcCCCCEEEEEChHHHhhc
Confidence 9996 677899999999 7999999999999876
No 39
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=99.89 E-value=1.1e-23 Score=189.73 Aligned_cols=93 Identities=28% Similarity=0.328 Sum_probs=80.8
Q ss_pred CCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcCchHHHHHHHH
Q psy2118 234 NGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITGSHKAFALYKA 313 (357)
Q Consensus 234 ~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~ 313 (357)
+|||+||||||||||++ .+++.+ +.+.++|..+.+++|++|||||+++|++||+|+|+++|++|+++|+++
T Consensus 131 LG~G~dGH~as~fPg~~--------~L~~~~-~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G~~Ka~av~~~ 201 (226)
T 3lwd_A 131 LGMGGDGHTASLFPDSE--------QLATAL-ETTSAAVVVHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEA 201 (226)
T ss_dssp ECCCTTSCBTTBCTTCT--------THHHHH-HCCSSEEEECCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHH
T ss_pred ECcCCCCCeeecCCCCh--------hhhhhh-ccCCeEEecCCCCCCCcEEEcCHHHHHhhCeEEEEEECHHHHHHHHHH
Confidence 39999999999999976 344444 445667754678899999999999999999999999999999999999
Q ss_pred HhcCCCcccchhhhccCC-cEEE
Q psy2118 314 VEEGVNHMWTVSAFQMHP-CTIM 335 (357)
Q Consensus 314 l~~~~~~~~Pa~~~~~~~-~~~~ 335 (357)
++|+++.++|||+++.|+ .+.|
T Consensus 202 l~g~~~~~~Pas~l~~h~~~v~w 224 (226)
T 3lwd_A 202 LAGDDVRQLPIRAFLSQPIATYW 224 (226)
T ss_dssp HHCCCTTTSTTHHHHTSCCEEEE
T ss_pred HcCCCCCcCChHHHhcCCCeEEe
Confidence 999988899999999986 5666
No 40
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=99.89 E-value=3.2e-24 Score=200.62 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=91.5
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCc------cceEEecchHHHH----------------HhhhccCCCCCCCCC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLAS------RTRLKTLAQETLE----------------ANARFFDNDIKKVPK 281 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~------~~~~~~~~~~~~~----------------~~~~~f~~~~~~~p~ 281 (357)
.++-|| |||+||||||||||+++++ +++++. +.++. ...++|....+.+|+
T Consensus 159 ~DL~LL-----GiG~DGHiaslfPg~~~~~~~~~~~~t~~l~--e~t~~~~~~~~s~~~~~~~~~~~~~~f~~~~~~pP~ 231 (312)
T 3e15_A 159 VDIAIL-----GMGSDFHIASLFPNIFFNIYMNNYQNSYIYD--ESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVR 231 (312)
T ss_dssp CCEEEE-----CCCTTSCBTTBCSSHHHHHHHHHTGGGSSSC--GGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCS
T ss_pred CcEEEE-----ccCCCCceeecCCCCcccccccccccceeec--HHHHHHhhcccccccccccccccceeeccCCCCCCC
Confidence 345555 9999999999999986533 454422 33321 124678777788889
Q ss_pred ceEEeCHHHHhccceEEEEEcCchHHHHHHHHHh-cCCCc---ccchhhhccCCcEEEEeeHHH
Q psy2118 282 EALTVGVGTVMDAQEVMILITGSHKAFALYKAVE-EGVNH---MWTVSAFQMHPCTIMICDEDA 341 (357)
Q Consensus 282 ~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~-~~~~~---~~Pa~~~~~~~~~~~~~D~~a 341 (357)
+|||||+++|++||+|+|+++|++||++|+++++ |+++. .+|||+||.||++++++|..+
T Consensus 232 ~rITlt~~~I~~Ak~v~~lv~G~~Ka~av~~~l~~g~vt~~~~~~PAS~Lq~Hp~~~vv~~~~~ 295 (312)
T 3e15_A 232 KRITVSLDLLGNASSKIFLLNSTDKLDLWKNMLLKSYVDVNYCLYPAVYLIDSMNTTVVTCGYT 295 (312)
T ss_dssp EEEEECHHHHHTCSEEEEEECSHHHHHHHHHHHHHTTTTCCTTTCHHHHHHHTSCEEEEEESCT
T ss_pred eEEEecHHHHhcCCeEEEEEcChHHHHHHHHHHHhCCCCCCcCccchHHHhhCCCEEEEEcCCc
Confidence 9999999999999999999999999999999999 98777 899999999999999998776
No 41
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=99.87 E-value=1.8e-22 Score=182.64 Aligned_cols=94 Identities=17% Similarity=0.284 Sum_probs=75.7
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEEcC
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILITG 303 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~G 303 (357)
.++-+| |||+||||||||||++. +.+.+.... ++|..+.+++|++|||||+++|++||+|+|+++|
T Consensus 130 ~Dl~lL-----G~G~dGHias~fPg~~~--------L~~~~~~~~-~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~G 195 (233)
T 3nwp_A 130 FDVVVL-----GMGNDGHTCSWFPCSAE--------LENALTTQA-LCVATNPTTAPHGRITLSKSAILNSRQIYLHLVG 195 (233)
T ss_dssp BSEEEE-----CCCTTSCBTTBCTTCTT--------HHHHHHCCS-SEEEECCSSSSSCEEEECHHHHHSBSCEEEEEES
T ss_pred CCEEEE-----ccCCCCCeeecCCCCch--------hhhhcccCc-eEEECCCCCCCCceEECCHHHHHhhCeEEEEEEC
Confidence 345555 99999999999999761 111111111 3333345788999999999999999999999999
Q ss_pred chHHHHHHHHHhcCCCcccchhhhccCC
Q psy2118 304 SHKAFALYKAVEEGVNHMWTVSAFQMHP 331 (357)
Q Consensus 304 ~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~ 331 (357)
++|+++|+++++|+++.++|||+++.|+
T Consensus 196 ~~Ka~av~~~l~g~~~~~~Pas~l~~h~ 223 (233)
T 3nwp_A 196 EQKLSVYRQALESDDVHAMPIRAVLAQR 223 (233)
T ss_dssp HHHHHHHHHHHTCCCTTTCTTHHHHSCS
T ss_pred HHHHHHHHHHHhCCCCCCccHHHHHhCC
Confidence 9999999999999888899999999986
No 42
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=99.87 E-value=1.3e-22 Score=183.55 Aligned_cols=95 Identities=18% Similarity=0.262 Sum_probs=76.5
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHHHHh-hhccCCCCCCCCCceEEeCHHHHhccceEEEEEc
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEAN-ARFFDNDIKKVPKEALTVGVGTVMDAQEVMILIT 302 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~~ 302 (357)
.++-+| |||+||||||||||++.. .+.+...+ .++|..+.+++|++|||||+++|++||+|+|+++
T Consensus 128 ~Dl~lL-----G~G~dGH~as~fPg~~~l--------~~~~~~~~~~~~~~~~~~~~P~~riTlt~~~I~~A~~i~ll~~ 194 (232)
T 3lhi_A 128 PDVLIL-----GMGNDGHTASIFPKAPQF--------QTAIDGSAGVALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQ 194 (232)
T ss_dssp CSEEEE-----CCCTTSCBTTBCTTCTTH--------HHHHCCTTCCCEEEECCSSSSSCEEEECHHHHHTCSEEEEEEE
T ss_pred CCEEEE-----ccCCCCCeeecCCCChhh--------hhhhccccCcEEEeCCCCCCCCceEEecHHHHHhcCeEEEEEE
Confidence 355556 999999999999997742 11111112 2444345678899999999999999999999999
Q ss_pred CchHHHHHHHHHhcCCCcccchhhhccCCc
Q psy2118 303 GSHKAFALYKAVEEGVNHMWTVSAFQMHPC 332 (357)
Q Consensus 303 G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~ 332 (357)
|++|+++|+++++| ++.++|||+++.|++
T Consensus 195 G~~Ka~av~~~l~g-~~~~~Pas~l~~h~~ 223 (232)
T 3lhi_A 195 GEEKKAVFDQAAQG-ENREYPISLVLNHQG 223 (232)
T ss_dssp SHHHHHHHHHHHTS-CCTTSTHHHHHTSTT
T ss_pred CHHHHHHHHHHHhC-CCccCcHHHHHhCCC
Confidence 99999999999998 677899999999983
No 43
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=99.86 E-value=4.7e-22 Score=179.76 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=81.5
Q ss_pred ceeeeecCCCCCCCCCcceeecCC-CCCC-CccceEEecchHHHHHhhhccCCCCCCCCCceEEeCHHHHhccceEEEEE
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEP-GSSL-ASRTRLKTLAQETLEANARFFDNDIKKVPKEALTVGVGTVMDAQEVMILI 301 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P-~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~p~~riTlt~~~i~~a~~v~~~~ 301 (357)
.++-+| |||+|||+||||| |+++ +..++++. +.+++|++|||||+++|++||+|++++
T Consensus 138 ~Dl~lL-----GiG~dGH~aslfP~g~~~l~~~~~~v~---------------~~~~~p~~rITltl~~I~~A~~iilla 197 (232)
T 1vl1_A 138 FDLAIL-----GMGPDGHVASIFDLETGNKDNLVTFTD---------------PSGDPKVPRVTLTFRALNTSLYVLFLI 197 (232)
T ss_dssp CSEEEE-----CCCTTSCBTTBCSHHHHTCSSSEEECS---------------SBTTTTBCEEEECHHHHTTCSEEEEEE
T ss_pred CCEEEE-----ecCCCCchhhccCCCCcccccCCcEEe---------------cCCCCCCCEEECCHHHHHhCCEEEEEE
Confidence 355666 9999999999999 9764 66666543 246789999999999999999999999
Q ss_pred cCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeH
Q psy2118 302 TGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDE 339 (357)
Q Consensus 302 ~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~ 339 (357)
+|++|+++++++++|+ ++|||+++.|++++||+|+
T Consensus 198 ~G~~Ka~av~~~l~g~---~~Pas~l~~h~~~~~~~D~ 232 (232)
T 1vl1_A 198 RGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFVGK 232 (232)
T ss_dssp ESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEEEC
T ss_pred cCHHHHHHHHHHHhCC---CCChHHhCcCCCEEEEeCC
Confidence 9999999999999994 3999999999999999995
No 44
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.23 E-value=1.6e-11 Score=112.84 Aligned_cols=147 Identities=20% Similarity=0.178 Sum_probs=92.7
Q ss_pred CHHHHHHHHHHHHHHHHhccCCCCCccccccc--------hHHHHHHHHHHHHhCCeeEEEEeecCC---CcccccCCCC
Q psy2118 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGL--------PTECVQYEKDIKEAGGIHLFVGGIGPD---GHIAFNEPGS 76 (357)
Q Consensus 8 ~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl--------~~~~~~y~~~i~~~~~~DlvllGiG~d---GHiaf~~p~~ 76 (357)
+.+..+..+.+.+++++.. ....-+...+. -.+|..|++.|+..+++|++|+|||.+ ||+ |+ |++
T Consensus 99 ~~~~~~~~~~~~la~~~~~--~~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~i-~~-~g~ 174 (264)
T 2r5f_A 99 KGAFEATLLTQRLATLLNC--PAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFDSITLAIVGIGELEPSQLL-RN-SGN 174 (264)
T ss_dssp -CHHHHHHHHHHHHHHHTS--CEECCCCC----------CCHHHHHHHHHHHHTTTCCEEEECCEECC------------
T ss_pred ccccCHHHHHHHHHHHhCC--eeEEeeCCcccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCCCCCccH-hh-cCC
Confidence 3455566667777776644 11111112222 237899999999999999999999987 999 87 775
Q ss_pred CCCCCceEEecchHHHH--HHhcccCCCCCCCC----ccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccce
Q psy2118 77 SLASRTRLKTLAQETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWT 150 (357)
Q Consensus 77 ~~~~~~~v~~~~~~~~~--~~a~~l~~~~~~~p----~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~p 150 (357)
+.+.++++.+.+.... ...++|..+-..+| .+.||+++..|++++++++++.|++|++++..++.++..
T Consensus 175 -~~~~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~~~~vI~vA~G~~Ka~AI~aal~g~~~---- 249 (264)
T 2r5f_A 175 -YYTEDMLRVLAERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL---- 249 (264)
T ss_dssp ----------CTTTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC----
T ss_pred -CCCHHHHHHHHHCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcCCCCEEEEEcCHHHHHHHHHHHhcCCC----
Confidence 6666777777655422 45677865555666 889999999999999999999999999999999998641
Q ss_pred ecccccccceEEEeccchhhhh
Q psy2118 151 VSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 151 v~~l~~~~~~i~ilD~~a~~~l 172 (357)
.++++|+.++..+
T Consensus 250 ---------~~LItDe~aA~~L 262 (264)
T 2r5f_A 250 ---------DVLITDVGTARGL 262 (264)
T ss_dssp ---------SEEEEEHHHHHHH
T ss_pred ---------CEEEECHHHHHHH
Confidence 3788999887653
No 45
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural GE PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=99.16 E-value=3e-11 Score=111.08 Aligned_cols=102 Identities=26% Similarity=0.388 Sum_probs=68.2
Q ss_pred cceeeeecCCCCCCCCC---cceeecCCCCCCCccceEEecchHHH--HHhhhccCCCCCCCC----CceEEeCHHHHhc
Q psy2118 223 TLCLQLVEGKPNGIGPD---GHIAFNEPGSSLASRTRLKTLAQETL--EANARFFDNDIKKVP----KEALTVGVGTVMD 293 (357)
Q Consensus 223 ~~~~~ll~~~~~G~~~d---GH~a~~~P~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~p----~~riTlt~~~i~~ 293 (357)
..++-++ |||.+ ||+ ++ ||+ +.+.++++.+.+.+. +.+.+||+.+-..+| .+.|||++..|++
T Consensus 152 ~~Di~l~-----GIG~~~~~~~i-~~-~g~-~~~~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~l~~ 223 (264)
T 2r5f_A 152 SITLAIV-----GIGELEPSQLL-RN-SGN-YYTEDMLRVLAERGAVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRS 223 (264)
T ss_dssp TCCEEEE-----CCEECC----------------------CTTTTCCEEETTEEECTTSCBC-------CEECCHHHHHT
T ss_pred cCCEEEE-----ecCCCCCCccH-hh-cCC-CCCHHHHHHHHHCCcEEEeEhhhhccCCCCCCCccccceecCCHHHHcC
Confidence 3466777 99975 999 87 886 778888888877653 378999975545677 8999999999999
Q ss_pred cceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 294 AQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 294 a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
+++++++|.|++|+++++.+|+|+.. .++++|++||+.|
T Consensus 224 ~~~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~L 262 (264)
T 2r5f_A 224 INRVLGLAGGVRKVQAIKGALLGGYL-------------DVLITDVGTARGL 262 (264)
T ss_dssp SSEEEEECCCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHH
T ss_pred CCCEEEEEcCHHHHHHHHHHHhcCCC-------------CEEEECHHHHHHH
Confidence 99999999999999999999999742 2778999999865
No 46
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.02 E-value=2.7e-11 Score=110.78 Aligned_cols=145 Identities=19% Similarity=0.211 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCccccccch-------HHHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCC
Q psy2118 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLP-------TECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASR 81 (357)
Q Consensus 9 ~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~-------~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~ 81 (357)
.+..+..+.+.+++++.. ....-+...+.+ .+|..|++.|+..+++|++++|||.+||++ +|+ ..+.
T Consensus 97 ~~~~~~~~~~~la~~~~~--~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~Di~l~GIG~~~~i~--~~g--~~~~ 170 (255)
T 2okg_A 97 VKNQANTICAHMAEKASG--TYRLLFVPGQLSQGAYSSIIEEPSVKEVLNTIKSASMLVHGIGEAKTMA--QRR--NTPL 170 (255)
T ss_dssp -CCHHHHHHHHHHHHHTC--EECCCCCCCSCCHHHHHHHHTSHHHHHHHHHHHTCSEEEECCEEHHHHH--HHT--TCCH
T ss_pred cccCHHHHHHHHHHHHCC--eeEEEeccccCCHHHHHHHHcChHHHHHHHHHhcCCEEEEecCCchhhh--hcC--CCCH
Confidence 334455666666666644 122222333333 246789999999999999999999999996 776 3444
Q ss_pred ceEEecchHHH--HHHhcccCCCCCCCC-ccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceeccccccc
Q psy2118 82 TRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHP 158 (357)
Q Consensus 82 ~~v~~~~~~~~--~~~a~~l~~~~~~~p-~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~ 158 (357)
++++.+.+.+. ..+.++|..+-..+| ...+|+++..|++++++++++.|++|++++..++.++.
T Consensus 171 ~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~------------- 237 (255)
T 2okg_A 171 EDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPR------------- 237 (255)
T ss_dssp HHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSCC-------------
T ss_pred HHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEEEEEcCHHHHHHHHHHHhCCC-------------
Confidence 54443333221 133567765555566 68999999999999999999999999999999998764
Q ss_pred ceEEEeccchhhhh
Q psy2118 159 CTIMICDEDATQEL 172 (357)
Q Consensus 159 ~~i~ilD~~a~~~l 172 (357)
..++++|+.++..+
T Consensus 238 ~~~LItDe~aA~~L 251 (255)
T 2okg_A 238 NTVLVTDEGAAKKL 251 (255)
T ss_dssp CEEEEEEHHHHHHH
T ss_pred CCEEEECHHHHHHH
Confidence 14788999887654
No 47
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.00 E-value=3.4e-11 Score=110.07 Aligned_cols=100 Identities=22% Similarity=0.316 Sum_probs=81.3
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHH--HHhhhccCCCCCCCC-CceEEeCHHHHhccceEEEE
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVMIL 300 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~p-~~riTlt~~~i~~a~~v~~~ 300 (357)
.++-++ |||.+||++ .|| +.+.++++.+.+.+. +.+.+||+.+-..+| .+.|||++..|+++++++++
T Consensus 149 ~Di~l~-----GIG~~~~i~--~~g--~~~~~~~~~L~~~~avg~~~~rffd~~G~~V~~~~~igi~l~~i~~~~~vI~v 219 (255)
T 2okg_A 149 ASMLVH-----GIGEAKTMA--QRR--NTPLEDLKKIDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAV 219 (255)
T ss_dssp CSEEEE-----CCEEHHHHH--HHT--TCCHHHHHHHHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEE
T ss_pred CCEEEE-----ecCCchhhh--hcC--CCCHHHHHHHHHCCeEEEeehhhhccCCCCccCCceecCCHHHHhCCCCEEEE
Confidence 456677 999999986 787 556677666655542 367899975545567 78999999999999999999
Q ss_pred EcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 301 ITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 301 ~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
|.|++|+++++.+|+|+.. .++++|++||+.|
T Consensus 220 A~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~L 251 (255)
T 2okg_A 220 AGGSSKAEAIEAYFKKPRN-------------TVLVTDEGAAKKL 251 (255)
T ss_dssp CCSGGGHHHHHHHTTSCCC-------------EEEEEEHHHHHHH
T ss_pred EcCHHHHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence 9999999999999999742 3778999999875
No 48
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=98.93 E-value=2e-10 Score=108.17 Aligned_cols=116 Identities=12% Similarity=0.185 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHhCCeeEEEEeecCCCcccccCC-CCCCCCCceEEecchHHH--HHHhcccCCCCCCCC----ccceecc
Q psy2118 42 ECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEP-GSSLASRTRLKTLAQETL--EANARFFDNDIKKVP----KEALTVG 114 (357)
Q Consensus 42 ~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p-~~~~~~~~~v~~~~~~~~--~~~a~~l~~~~~~~p----~~riTlt 114 (357)
+|..|++.|+..+++|++++||| ||++|+.| +++..+.++++.+.+.+. ..+.++|..+-..+| .+.+|++
T Consensus 191 ~~~~~~~~l~~~~~~DiailGIG--g~~~~~g~~~~~~~~~~~~~~L~~~~avg~~~~rffd~~g~~v~~~~~~~~i~~~ 268 (315)
T 2w48_A 191 QSQHFKTISSYWDSLDVALVGIG--SPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIE 268 (315)
T ss_dssp HSHHHHHHHHHHTTCSEEEECCB--CTTCCSSSCHHHHHCTHHHHHHHHTTEEEEETTEEEETTSCBCCCSSGGGBCBCC
T ss_pred hChHHHHHHHHHhcCCEEEEccC--cchhhcCccccccCCHHHHHHHHHCCcEEEEECceECCCCCEeCCccccceecCC
Confidence 56889999999999999999999 99999854 011333344333322211 123467755545566 8899999
Q ss_pred hhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 115 VGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 115 ~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
+..|++++++++++.|++|++++..++.++.. .++++|+.++..+
T Consensus 269 l~~i~~~~~ii~vA~G~~Ka~Ai~~al~g~~~-------------~~LitDe~aA~~l 313 (315)
T 2w48_A 269 MAKLRQARYSIGIAMGEEKYSGILGALHGRYI-------------NCLVTNRETAELL 313 (315)
T ss_dssp HHHHHTSSEEEEECCCGGGHHHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred HHHHhCCCCEEEEecChHhHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence 99999999999999999999999999998641 3788999887653
No 49
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=98.91 E-value=2.3e-10 Score=107.83 Aligned_cols=102 Identities=17% Similarity=0.249 Sum_probs=78.8
Q ss_pred ceeeeecCCCCCCCCCcceeecCC-CCCCCccceEEecchHHH--HHhhhccCCCCCCCC----CceEEeCHHHHhccce
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEP-GSSLASRTRLKTLAQETL--EANARFFDNDIKKVP----KEALTVGVGTVMDAQE 296 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P-~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~p----~~riTlt~~~i~~a~~ 296 (357)
.++-++ |+| ||++++.| ++++.+.++++.+.+.+. +.+.+||+.+-..+| .+.|||++..|+++++
T Consensus 205 ~Diail-----GIG--g~~~~~g~~~~~~~~~~~~~~L~~~~avg~~~~rffd~~g~~v~~~~~~~~i~~~l~~i~~~~~ 277 (315)
T 2w48_A 205 LDVALV-----GIG--SPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARY 277 (315)
T ss_dssp CSEEEE-----CCB--CTTCCSSSCHHHHHCTHHHHHHHHTTEEEEETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSE
T ss_pred CCEEEE-----ccC--cchhhcCccccccCCHHHHHHHHHCCcEEEEECceECCCCCEeCCccccceecCCHHHHhCCCC
Confidence 456667 999 99999854 112444555555544432 367899975545677 8899999999999999
Q ss_pred EEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 297 VMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 297 v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
++++|.|++|+++++.+|+|+.. .++++|++||+.|
T Consensus 278 ii~vA~G~~Ka~Ai~~al~g~~~-------------~~LitDe~aA~~l 313 (315)
T 2w48_A 278 SIGIAMGEEKYSGILGALHGRYI-------------NCLVTNRETAELL 313 (315)
T ss_dssp EEEECCCGGGHHHHHHHHHTTSC-------------SEEEEEHHHHHHH
T ss_pred EEEEecChHhHHHHHHHHhCCCC-------------CEEEECHHHHHHH
Confidence 99999999999999999999742 2778999999865
No 50
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=98.88 E-value=7.9e-10 Score=101.63 Aligned_cols=104 Identities=17% Similarity=0.286 Sum_probs=82.0
Q ss_pred cceeeeecCCCCCCCCCcceeec-CCCCCCCccceEEecchHHH--HHhhhccCCCCCCCC----CceEEeCHHHHhccc
Q psy2118 223 TLCLQLVEGKPNGIGPDGHIAFN-EPGSSLASRTRLKTLAQETL--EANARFFDNDIKKVP----KEALTVGVGTVMDAQ 295 (357)
Q Consensus 223 ~~~~~ll~~~~~G~~~dGH~a~~-~P~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~p----~~riTlt~~~i~~a~ 295 (357)
..++-++ |||.+||-+.. +|| +.+.++++.+.+.+. +.+.+||+.+-..+| .+.|||++..|++++
T Consensus 150 ~~Di~l~-----GIG~~~~~~~~~~~g--~~s~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~ 222 (266)
T 2gnp_A 150 DLDIAVV-----GIGDFSNKGKHQWLD--MLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIP 222 (266)
T ss_dssp SCSEEEE-----CCEECSHHHHHTTTT--TSCHHHHHHHHHTTCCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSS
T ss_pred hCCEEEE-----ecCCCCCCCcchhcC--CCCHHHHHHHHHCCeEEEEEchhhccCCCCCCCccccceecCCHHHHcCCC
Confidence 4567777 99999974443 244 556677666655543 367899975556788 899999999999999
Q ss_pred eEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhhh
Q psy2118 296 EVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQELR 346 (357)
Q Consensus 296 ~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l~ 346 (357)
+++++|.|++|+++++.+|+|+.. .++++|++||+.|-
T Consensus 223 ~vI~vA~G~~Ka~AI~aal~g~~~-------------~~LItDe~aA~~Ll 260 (266)
T 2gnp_A 223 QSLAVAYGDTKVSSILSVLRANLV-------------NHLITDKNTILKVL 260 (266)
T ss_dssp EEEEECCSGGGHHHHHHHHHTTCC-------------SEEEEEHHHHHHHH
T ss_pred CEEEEecChhhHHHHHHHHhcCCC-------------CEEEECHHHHHHHH
Confidence 999999999999999999999742 27789999998763
No 51
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, streptococcus pneumonia PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae} SCOP: c.124.1.8
Probab=98.85 E-value=6.8e-10 Score=102.05 Aligned_cols=147 Identities=12% Similarity=0.133 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCccccccch--------HHHHHHHHHHHHhCCeeEEEEeecCCCcccccC-CCCCCC
Q psy2118 9 VSNVAEWSARYVLKKITDFKPGPDNYFVLGLP--------TECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNE-PGSSLA 79 (357)
Q Consensus 9 ~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~--------~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~-p~~~~~ 79 (357)
.+..+..+.+.+++++... ...-+...+.+ .+|..|++.|+..+++|++|+|||.+|+-+..+ |+ ..
T Consensus 98 ~~~~~~~~~~~la~~~~~~--~~~l~~P~~~~~~~~~~~~~~~~~~~~~l~~~~~~Di~l~GIG~~~~~~~~~~~g--~~ 173 (266)
T 2gnp_A 98 AKYHVNTLIYEMSRKFHGE--CTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSNKGKHQWLD--ML 173 (266)
T ss_dssp GGGSHHHHHHHHHHHHTCE--ECCCCSCSBCSSHHHHHHHHTSTTTHHHHHHTTSCSEEEECCEECSHHHHHTTTT--TS
T ss_pred cccCHHHHHHHHHHHhCCe--eEEEeCCcccCCHHHHHHHHcCHHHHHHHHHHHhCCEEEEecCCCCCCCcchhcC--CC
Confidence 4455566667777666441 11112222221 156679999999999999999999999733322 32 33
Q ss_pred CCceEEecchHHHH--HHhcccCCCCCCCC----ccceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecc
Q psy2118 80 SRTRLKTLAQETLE--ANARFFDNDIKKVP----KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSA 153 (357)
Q Consensus 80 ~~~~v~~~~~~~~~--~~a~~l~~~~~~~p----~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~ 153 (357)
+.++++.+.+.+.. .+.++|..+-..+| .+.||+++..|++++++++++.|++|++++..++.++..
T Consensus 174 s~~~~~~L~~~~avgd~~~rffd~~G~~V~~~~~~r~i~i~l~~i~~~~~vI~vA~G~~Ka~AI~aal~g~~~------- 246 (266)
T 2gnp_A 174 TEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLV------- 246 (266)
T ss_dssp CHHHHHHHHHTTCCEEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTCC-------
T ss_pred CHHHHHHHHHCCeEEEEEchhhccCCCCCCCccccceecCCHHHHcCCCCEEEEecChhhHHHHHHHHhcCCC-------
Confidence 44444433322211 33567765656778 889999999999999999999999999999999998641
Q ss_pred cccccceEEEeccchhhhh
Q psy2118 154 FQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 154 l~~~~~~i~ilD~~a~~~l 172 (357)
.++++|+.++..+
T Consensus 247 ------~~LItDe~aA~~L 259 (266)
T 2gnp_A 247 ------NHLITDKNTILKV 259 (266)
T ss_dssp ------SEEEEEHHHHHHH
T ss_pred ------CEEEECHHHHHHH
Confidence 3788999887654
No 52
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=98.84 E-value=2.4e-10 Score=108.98 Aligned_cols=100 Identities=24% Similarity=0.255 Sum_probs=80.5
Q ss_pred ceeeeecCCCCCCCCCcceeecCCCCCCCccceEEecchHHH--HHhhhccCCCCCCCC-CceEEeCHHHHhccceEEEE
Q psy2118 224 LCLQLVEGKPNGIGPDGHIAFNEPGSSLASRTRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVMIL 300 (357)
Q Consensus 224 ~~~~ll~~~~~G~~~dGH~a~~~P~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~~~~p-~~riTlt~~~i~~a~~v~~~ 300 (357)
.++-++ |+|.+||++ .|| +.+.++++.+.+.+. +.+.+||+.+-..+| .+.|||++..|+++++++++
T Consensus 236 ~Diail-----GIG~~~~i~--~~g--~~~~~~~~~L~~~~avg~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi~v 306 (345)
T 2o0m_A 236 ANCVVH-----SIGRALHMA--ARR--KMSDDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAI 306 (345)
T ss_dssp CSEEEE-----CCEEHHHHH--HHT--TCCHHHHHHHHHTTCCEEETTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEE
T ss_pred CCEEEE-----ccCCchhhh--hcC--CCCHHHHHHHHHCCeEEEeeccccccCCCCcCCCceecCCHHHHcCCCCEEEE
Confidence 456667 999999987 777 556666666655443 557899975545566 77999999999999999999
Q ss_pred EcCchHHHHHHHHHhc-CCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 301 ITGSHKAFALYKAVEE-GVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 301 ~~G~~Ka~~~~~~l~~-~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
|.|++|+++++.+++| +.. .++++|++||+.|
T Consensus 307 A~G~~Ka~Ai~~al~g~~~~-------------~~LitDe~aA~~l 339 (345)
T 2o0m_A 307 AGGKTKAKAIRAYMKNAPKQ-------------TWLITDEAAANEI 339 (345)
T ss_dssp CCSGGGHHHHHHHHTTSCTT-------------CEEEEEHHHHHHH
T ss_pred EcChHHHHHHHHHHhCCCCC-------------eEEEECHHHHHHH
Confidence 9999999999999999 743 5778999999876
No 53
>2o0m_A Transcriptional regulator, SORC family; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: c.124.1.8
Probab=98.83 E-value=4.2e-10 Score=107.30 Aligned_cols=146 Identities=21% Similarity=0.169 Sum_probs=101.4
Q ss_pred CHHHHHHHHHHHHHHHHhccCCCCCccccccch-------HHHHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCC
Q psy2118 8 DVSNVAEWSARYVLKKITDFKPGPDNYFVLGLP-------TECVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLAS 80 (357)
Q Consensus 8 ~~~~~~~~~a~~i~~~l~~~~~~~~~~~~~gl~-------~~~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~ 80 (357)
+.+..+..+++.+.+++.. .....+...+.+ .+|..|++.|+..+++|++++|||.+||++ +|+ ..+
T Consensus 183 ~~~~~~~~i~~~la~~~~~--~~~~l~~P~~~~~~~~~~l~~~~~~~~~l~~~~~~DiailGIG~~~~i~--~~g--~~~ 256 (345)
T 2o0m_A 183 AVSVQANSISAVMANKTGG--NYRALYVPEQLSRETYNSLLQEPSIQEVLTLISHANCVVHSIGRALHMA--ARR--KMS 256 (345)
T ss_dssp CGGGSHHHHHHHHHHHHTC--EECCCCCCSSCCHHHHHHHHTCHHHHHHHHHHHTCSEEEECCEEHHHHH--HHT--TCC
T ss_pred CcccCHHHHHHHHHHHhCC--ceEEEeccccCCHHHHHHHHhChHHHHHHHHHHcCCEEEEccCCchhhh--hcC--CCC
Confidence 3444555666666666533 111112222222 146789999999889999999999999987 676 344
Q ss_pred CceEEecchHHH--HHHhcccCCCCCCCC-ccceecchhhhhccceEEEeeCCchhHHHHHHHHhc-CCcccceeccccc
Q psy2118 81 RTRLKTLAQETL--EANARFFDNDIKKVP-KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEE-GVNHMWTVSAFQM 156 (357)
Q Consensus 81 ~~~v~~~~~~~~--~~~a~~l~~~~~~~p-~~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~-~~~~~~pv~~l~~ 156 (357)
.+++..+.+... ..+.++|..+...+| ...+|+++..|++++++++++.|++|++++..++.+ +.
T Consensus 257 ~~~~~~L~~~~avg~~~~~ffd~~g~~v~~~~~i~i~l~~l~~~~~vi~vA~G~~Ka~Ai~~al~g~~~----------- 325 (345)
T 2o0m_A 257 DDEMVMLKQKNAVAESFGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNAPK----------- 325 (345)
T ss_dssp HHHHHHHHHTTCCEEETTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTSCT-----------
T ss_pred HHHHHHHHHCCeEEEeeccccccCCCCcCCCceecCCHHHHcCCCCEEEEEcChHHHHHHHHHHhCCCC-----------
Confidence 444433332221 223567765555566 679999999999999999999999999999999988 75
Q ss_pred ccceEEEeccchhhhh
Q psy2118 157 HPCTIMICDEDATQEL 172 (357)
Q Consensus 157 ~~~~i~ilD~~a~~~l 172 (357)
..++++|+.++..+
T Consensus 326 --~~~LitDe~aA~~l 339 (345)
T 2o0m_A 326 --QTWLITDEAAANEI 339 (345)
T ss_dssp --TCEEEEEHHHHHHH
T ss_pred --CeEEEECHHHHHHH
Confidence 26788999887654
No 54
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=98.06 E-value=5.9e-06 Score=75.66 Aligned_cols=110 Identities=17% Similarity=0.238 Sum_probs=74.5
Q ss_pred HHHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHH---H-------HhcccCCCCCC----CCc
Q psy2118 43 CVQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLE---A-------NARFFDNDIKK----VPK 108 (357)
Q Consensus 43 ~~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~---~-------~a~~l~~~~~~----~p~ 108 (357)
+..|++.++.....|+++.|||..|| +|++.+..... ++++.+. . ..++|..+-.. ++.
T Consensus 138 ~~~i~~~l~~~~~~Diai~GIG~~~~----~~~s~~~~~g~---~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~ 210 (267)
T 3nze_A 138 ERSVQRILDLQARMSIAIFGVGSVDS----DYPSHVYAGGY---LDEHDLTMLAADDVVGDVATVFFRSDGSSDGITLNE 210 (267)
T ss_dssp CHHHHHHHHHHHTCSEEEECCEECC---------CCCTTSC---CCHHHHHHHHHTTEEEEETTEEEETTSCCTTCGGGG
T ss_pred ChHHHHHHHHHhcCCEEEEecCCCCC----CCCChHHHcCC---CCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhc
Confidence 35678888888899999999999997 34444332211 1222222 1 23455433222 336
Q ss_pred cceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 109 EALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 109 ~riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
+.+++++..|+++++++.++.|.+|++++..++.++. -.+.++|+..+..+
T Consensus 211 r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~~-------------~~~LITDe~tA~~l 261 (267)
T 3nze_A 211 RSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGL-------------ATDLILDEASARRL 261 (267)
T ss_dssp GCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTC-------------CSEEEEEHHHHHHH
T ss_pred ceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcCC-------------CCEEEeCHHHHHHH
Confidence 7899999999999999999999999999999998765 13567788776554
No 55
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=97.99 E-value=1.1e-05 Score=73.87 Aligned_cols=66 Identities=20% Similarity=0.265 Sum_probs=53.0
Q ss_pred hhhccCCCCCCCC----CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHh
Q psy2118 268 NARFFDNDIKKVP----KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQ 343 (357)
Q Consensus 268 ~~~~f~~~~~~~p----~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~ 343 (357)
..+||+.+-.-++ .+.|+|++..|+++++++.+|.|++|+++++.+|.|+.- -++++|+++|.
T Consensus 193 ~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~vi~vA~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~ 259 (267)
T 3nze_A 193 ATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLA-------------TDLILDEASAR 259 (267)
T ss_dssp TTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTCC-------------SEEEEEHHHHH
T ss_pred ecccccCCCCCCCcchhcceecCChHHHccCCeEEEEeCChHHHHHHHHHHhcCCC-------------CEEEeCHHHHH
Confidence 4678864323323 678999999999999999999999999999999998632 24569999988
Q ss_pred hhh
Q psy2118 344 ELR 346 (357)
Q Consensus 344 ~l~ 346 (357)
.|-
T Consensus 260 ~lL 262 (267)
T 3nze_A 260 RLV 262 (267)
T ss_dssp HHT
T ss_pred HHH
Confidence 763
No 56
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=97.58 E-value=4.3e-05 Score=69.93 Aligned_cols=115 Identities=13% Similarity=0.187 Sum_probs=72.3
Q ss_pred HHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecc--hHHHHHH-h-cccCCCCCCCC----ccceecch
Q psy2118 44 VQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLA--QETLEAN-A-RFFDNDIKKVP----KEALTVGV 115 (357)
Q Consensus 44 ~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~--~~~~~~~-a-~~l~~~~~~~p----~~riTlt~ 115 (357)
..|++.++.....|+++.|||..+.-..++- ....+.+.+..+. ....-.+ . ++|..+-..++ ...+++++
T Consensus 137 ~~i~~vl~~~~~aDiai~GIG~~~~~s~l~~-~g~~~~~~~~~L~~~~gaVGdi~g~rffD~~G~~v~~~~~~~~i~~~l 215 (267)
T 3kv1_A 137 ATIKETLSQARKAEFALVGIGDMDENSHMVK-LGFFTPKEFVEARLNDGIVGDIGGFDFFKLDGTDADTLMRGRVIGLEM 215 (267)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEEHHHHTHHHH-TTSSCHHHHHHHHHTTCEEEEETTTEEEETTSCBCCCGGGGGBCBCCH
T ss_pred hHHHHHHHHHHhCCEEEEeCCCCCCccHHHH-hCCCCHHHHHHHHHhcCCEEEEcchHhhcCCCCEeccccccceeecCH
Confidence 4577777777889999999998773111110 1111111111110 0000011 2 35544333333 36899999
Q ss_pred hhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhhh
Q psy2118 116 GTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 172 (357)
Q Consensus 116 ~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~l 172 (357)
..|+++++++.++.|..|++++..++.++. -.+.++|+..+..+
T Consensus 216 ~~l~~~~~~i~va~G~~K~~ai~~al~~~~-------------~~~LITDe~tA~~l 259 (267)
T 3kv1_A 216 EDLRQIPNVVAMASESRKALSIMGALRTGV-------------IDVLATSVSCAMAL 259 (267)
T ss_dssp HHHHTSSEEEEECCCGGGHHHHHHHHHTSC-------------CSEEEEEHHHHHHH
T ss_pred HHHcCCCcEEEEecChHHHHHHHHHHhcCC-------------CCEEEeCHHHHHHH
Confidence 999999999999999999999999998764 13567888776553
No 57
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=97.49 E-value=0.00021 Score=65.19 Aligned_cols=106 Identities=12% Similarity=0.140 Sum_probs=69.5
Q ss_pred HHHHHHHHHhCCeeEEEEeecCCCcccccCCCCCCCCCceEEecchHHHHH----------HhcccCCCCCCCC----cc
Q psy2118 44 VQYEKDIKEAGGIHLFVGGIGPDGHIAFNEPGSSLASRTRLKTLAQETLEA----------NARFFDNDIKKVP----KE 109 (357)
Q Consensus 44 ~~y~~~i~~~~~~DlvllGiG~dGHiaf~~p~~~~~~~~~v~~~~~~~~~~----------~a~~l~~~~~~~p----~~ 109 (357)
..|++.++.....|+++.|||... +++.... .-.++++.+.. ..++|..+-..++ .+
T Consensus 144 ~~i~~vl~~~~~aDiai~GIG~~~------~~~~~~~---~g~~s~~~~~~L~~~gaVGdi~~~ffd~~G~~v~~~~~~r 214 (266)
T 3efb_A 144 QHFKTISAYWDNLDIALVGIGSPA------IRDGANW---HAFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMSEK 214 (266)
T ss_dssp HHHHHHHHHHHTCSEEEECCBCCC------------------CSCHHHHHHHHHTTCCEEETTEEECTTSCBCCCTTGGG
T ss_pred hHHHHHHHHHhcCCEEEEecCCCC------CCchhHH---hcCCCHHHHHHHHHCCcEEEEecccccCCCCCCCcchhcc
Confidence 457777777788999999999863 2222110 01123333221 1245654333232 36
Q ss_pred ceecchhhhhccceEEEeeCCchhHHHHHHHHhcCCcccceecccccccceEEEeccchhhh
Q psy2118 110 ALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQE 171 (357)
Q Consensus 110 riTlt~~~i~~a~~i~~~~~G~~Kadal~k~l~~~~~~~~pv~~l~~~~~~i~ilD~~a~~~ 171 (357)
.+++++..++++++++.++.|.+|++++..++.++. . .+.++|+..+..
T Consensus 215 ~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~~-~------------~~LITDe~tA~~ 263 (266)
T 3efb_A 215 TLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKY-I------------NCLVTNSSTAEL 263 (266)
T ss_dssp BCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTS-C------------SEEEEEHHHHHH
T ss_pred eecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcCC-C------------CEEEeCHHHHHH
Confidence 899999999999999999999999999999998765 1 356778766554
No 58
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=97.20 E-value=0.00051 Score=62.73 Aligned_cols=64 Identities=17% Similarity=0.275 Sum_probs=50.9
Q ss_pred hccCCCCCCCC----CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHhhh
Q psy2118 270 RFFDNDIKKVP----KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQEL 345 (357)
Q Consensus 270 ~~f~~~~~~~p----~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~~l 345 (357)
+||+.+-..++ .+.|+|++..|+++++++.++.|++|+++++.+|.|..- -++++|+++|..|
T Consensus 193 rffD~~G~~v~~~~~~~~i~~~l~~l~~~~~~i~va~G~~K~~ai~~al~~~~~-------------~~LITDe~tA~~l 259 (267)
T 3kv1_A 193 DFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTGVI-------------DVLATSVSCAMAL 259 (267)
T ss_dssp EEEETTSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTSCC-------------SEEEEEHHHHHHH
T ss_pred HhhcCCCCEeccccccceeecCHHHHcCCCcEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHHHH
Confidence 57764323333 368999999999999999999999999999999998622 2456999998876
Q ss_pred h
Q psy2118 346 R 346 (357)
Q Consensus 346 ~ 346 (357)
-
T Consensus 260 L 260 (267)
T 3kv1_A 260 L 260 (267)
T ss_dssp H
T ss_pred H
Confidence 3
No 59
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=97.06 E-value=0.0005 Score=62.71 Aligned_cols=65 Identities=15% Similarity=0.217 Sum_probs=51.7
Q ss_pred hhhccCCCCCCCC----CceEEeCHHHHhccceEEEEEcCchHHHHHHHHHhcCCCcccchhhhccCCcEEEEeeHHHHh
Q psy2118 268 NARFFDNDIKKVP----KEALTVGVGTVMDAQEVMILITGSHKAFALYKAVEEGVNHMWTVSAFQMHPCTIMICDEDATQ 343 (357)
Q Consensus 268 ~~~~f~~~~~~~p----~~riTlt~~~i~~a~~v~~~~~G~~Ka~~~~~~l~~~~~~~~Pa~~~~~~~~~~~~~D~~aa~ 343 (357)
..+||+.+-..++ .+.|+|++..|+++++++.+|.|++|+++++.+|.|+.- -++++|+++|.
T Consensus 196 ~~~ffd~~G~~v~~~~~~r~i~~~l~~l~~~~~~i~va~G~~Ka~Ai~aal~g~~~-------------~~LITDe~tA~ 262 (266)
T 3efb_A 196 CSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKYI-------------NCLVTNSSTAE 262 (266)
T ss_dssp TTEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTSC-------------SEEEEEHHHHH
T ss_pred ecccccCCCCCCCcchhcceecCCHHHHhCCCCEEEEecChHHHHHHHHHHhcCCC-------------CEEEeCHHHHH
Confidence 4678864322232 378999999999999999999999999999999998621 24568999887
Q ss_pred hh
Q psy2118 344 EL 345 (357)
Q Consensus 344 ~l 345 (357)
.|
T Consensus 263 ~l 264 (266)
T 3efb_A 263 LL 264 (266)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 60
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=23.18 E-value=33 Score=24.76 Aligned_cols=15 Identities=33% Similarity=0.324 Sum_probs=12.8
Q ss_pred CCCCcceeecCCCCC
Q psy2118 236 IGPDGHIAFNEPGSS 250 (357)
Q Consensus 236 ~~~dGH~a~~~P~~~ 250 (357)
..+|||.+..|||.+
T Consensus 44 w~ddGHe~lv~PGPD 58 (83)
T 2a7y_A 44 WLVNGHETTVYPGSD 58 (83)
T ss_dssp ETTTTEEEEECCCSS
T ss_pred ecCCCcEEEEecCCC
Confidence 457999999999965
Done!