BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2121
(66 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q16HW7|GNPI_AEDAE Glucosamine-6-phosphate isomerase OS=Aedes aegypti GN=Gnpda1 PE=3
SV=1
Length = 278
Score = 115 bits (289), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/60 (90%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILI G+HKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILIIGAHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVKYFKAL 258
>sp|Q8TDQ7|GNPI2_HUMAN Glucosamine-6-phosphate isomerase 2 OS=Homo sapiens GN=GNPDA2 PE=1
SV=1
Length = 276
Score = 115 bits (288), Expect = 7e-26, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258
>sp|Q17QL1|GNPI2_BOVIN Glucosamine-6-phosphate isomerase 2 OS=Bos taurus GN=GNPDA2 PE=2
SV=1
Length = 276
Score = 115 bits (288), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258
>sp|Q6PA43|GNPI2_XENLA Glucosamine-6-phosphate isomerase 2 OS=Xenopus laevis GN=gnpda2
PE=2 SV=1
Length = 275
Score = 115 bits (287), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258
>sp|A4IHW6|GNPI2_XENTR Glucosamine-6-phosphate isomerase 2 OS=Xenopus tropicalis GN=gnpda2
PE=2 SV=1
Length = 275
Score = 114 bits (286), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/60 (88%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258
>sp|Q5TNH5|GNPI_ANOGA Glucosamine-6-phosphate isomerase OS=Anopheles gambiae GN=Gnpda1
PE=3 SV=3
Length = 273
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/63 (87%), Positives = 58/63 (92%), Gaps = 2/63 (3%)
Query: 2 SRELMVMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVK 61
+RE+M+MIL GSHKAFALYKAIEEGVNHMWTVSAFQ HP TIMICDEDAT ELRVKTVK
Sbjct: 196 AREVMIMIL--GSHKAFALYKAIEEGVNHMWTVSAFQQHPHTIMICDEDATLELRVKTVK 253
Query: 62 YFK 64
YFK
Sbjct: 254 YFK 256
>sp|Q9CRC9|GNPI2_MOUSE Glucosamine-6-phosphate isomerase 2 OS=Mus musculus GN=Gnpda2 PE=2
SV=1
Length = 276
Score = 114 bits (284), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/60 (86%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKA+EEGVNHMWTVSAFQ HP TI +CDEDAT ELRVKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAMEEGVNHMWTVSAFQQHPRTIFVCDEDATLELRVKTVKYFKGL 258
>sp|Q29NT9|GNPI_DROPS Glucosamine-6-phosphate isomerase OS=Drosophila pseudoobscura
pseudoobscura GN=Gnpda1 PE=3 SV=1
Length = 274
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/58 (89%), Positives = 54/58 (93%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H T+MICDEDAT ELRVKTVKYFK
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFK 256
>sp|A4FV08|GNPI1_BOVIN Glucosamine-6-phosphate isomerase 1 OS=Bos taurus GN=GNPDA1 PE=2
SV=1
Length = 289
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258
>sp|O88958|GNPI1_MOUSE Glucosamine-6-phosphate isomerase 1 OS=Mus musculus GN=Gnpda1 PE=2
SV=3
Length = 289
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258
>sp|Q9VMP9|GNPI_DROME Glucosamine-6-phosphate isomerase OS=Drosophila melanogaster
GN=Gnpda1 PE=2 SV=1
Length = 273
Score = 112 bits (280), Expect = 6e-25, Method: Composition-based stats.
Identities = 52/58 (89%), Positives = 54/58 (93%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFK 64
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ H T+MICDEDAT ELRVKTVKYFK
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHANTLMICDEDATLELRVKTVKYFK 256
>sp|Q5R8T8|GNPI1_PONAB Glucosamine-6-phosphate isomerase 1 OS=Pongo abelii GN=GNPDA1 PE=2
SV=1
Length = 289
Score = 112 bits (280), Expect = 8e-25, Method: Composition-based stats.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258
>sp|P46926|GNPI1_HUMAN Glucosamine-6-phosphate isomerase 1 OS=Homo sapiens GN=GNPDA1 PE=1
SV=1
Length = 289
Score = 112 bits (279), Expect = 9e-25, Method: Composition-based stats.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258
>sp|Q64422|GNPI1_MESAU Glucosamine-6-phosphate isomerase 1 OS=Mesocricetus auratus
GN=GNPDA1 PE=2 SV=1
Length = 289
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 55/60 (91%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITG+HKAFALYKAIEEGVNHMWTVSAFQ HP T+ +CDEDAT EL+VKTVKYFK L
Sbjct: 199 VMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFVCDEDATLELKVKTVKYFKGL 258
>sp|Q54XK9|GNPI_DICDI Glucosamine-6-phosphate isomerase OS=Dictyostelium discoideum
GN=gnpda1 PE=3 SV=1
Length = 267
Score = 91.3 bits (225), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 50/60 (83%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+++++TG KA ALY+ IEEGVNHMWT SA QMH +I++CDEDAT EL+VKT KYFK++
Sbjct: 202 IILIVTGHSKAIALYRTIEEGVNHMWTASAIQMHKKSIIVCDEDATAELKVKTYKYFKQV 261
>sp|B6EN78|NAGB_ALISL Glucosamine-6-phosphate deaminase OS=Aliivibrio salmonicida (strain
LFI1238) GN=nagB PE=3 SV=1
Length = 266
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 49/60 (81%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MILITG +KA AL A+E VNHMWTVSA Q+HP ++++CDE + QEL+VKTVKYFK L
Sbjct: 199 IMILITGHNKALALQAAVEGSVNHMWTVSALQIHPKSVIVCDEASQQELKVKTVKYFKEL 258
>sp|B7VTI0|NAGB_VIBSL Glucosamine-6-phosphate deaminase OS=Vibrio splendidus (strain
LGP32) GN=nagB PE=3 SV=1
Length = 266
Score = 89.4 bits (220), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+M+L+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE ATQEL+VKTVKYF L
Sbjct: 199 IMVLVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPATQELKVKTVKYFSEL 258
>sp|Q9XVJ2|GNPI_CAEEL Probable glucosamine-6-phosphate isomerase OS=Caenorhabditis
elegans GN=T03F6.3 PE=1 SV=1
Length = 267
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/60 (73%), Positives = 49/60 (81%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMILITGSHKA AL++AIE G++HM TVSA QMH C I DEDAT EL+VKTVKYFK L
Sbjct: 198 VMILITGSHKALALHQAIECGISHMCTVSAMQMHRCATFIADEDATLELKVKTVKYFKGL 257
>sp|B5FBU7|NAGB_VIBFM Glucosamine-6-phosphate deaminase OS=Vibrio fischeri (strain MJ11)
GN=nagB PE=3 SV=1
Length = 266
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 50/60 (83%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MILITG +K AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF++L
Sbjct: 199 IMILITGHNKGLALQAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFQQL 258
>sp|Q5E294|NAGB_VIBF1 Glucosamine-6-phosphate deaminase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=nagB PE=3 SV=1
Length = 266
Score = 89.4 bits (220), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 50/60 (83%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MILITG +K AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF++L
Sbjct: 199 IMILITGHNKGLALQAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFQQL 258
>sp|Q7MGE1|NAGB_VIBVY Glucosamine-6-phosphate deaminase OS=Vibrio vulnificus (strain
YJ016) GN=nagB PE=3 SV=1
Length = 266
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MIL+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF L
Sbjct: 199 IMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFTEL 258
>sp|Q8D4T9|NAGB_VIBVU Glucosamine-6-phosphate deaminase OS=Vibrio vulnificus (strain
CMCP6) GN=nagB PE=3 SV=1
Length = 266
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 49/60 (81%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MIL+TG +KA AL A+E VNH+WTVSA Q+HP ++++CDE +TQEL+VKTVKYF L
Sbjct: 199 IMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKSVIVCDEPSTQELKVKTVKYFTEL 258
>sp|C3LWT7|NAGB_VIBCM Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain M66-2) GN=nagB PE=3 SV=1
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF L
Sbjct: 199 IMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYFTEL 258
>sp|Q9KKS5|NAGB_VIBCH Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=nagB PE=3
SV=1
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF L
Sbjct: 199 IMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYFTEL 258
>sp|A5F125|NAGB_VIBC3 Glucosamine-6-phosphate deaminase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=nagB PE=3 SV=1
Length = 266
Score = 88.2 bits (217), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+MIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE +TQEL+VKTVKYF L
Sbjct: 199 IMILVTGHNKALALQAAVEGSVNHLWTVSALQLHPKAVIVCDEPSTQELKVKTVKYFTEL 258
>sp|A7N5W3|NAGB_VIBHB Glucosamine-6-phosphate deaminase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=nagB PE=3 SV=1
Length = 266
Score = 86.7 bits (213), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE + QEL+VKTVKYF L
Sbjct: 199 VMILVTGHNKALALEAAVEGSVNHLWTVSALQLHPKAVIVCDEPSQQELKVKTVKYFSEL 258
>sp|Q87K60|NAGB_VIBPA Glucosamine-6-phosphate deaminase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=nagB PE=3 SV=1
Length = 266
Score = 85.5 bits (210), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+TG +KA AL A+E VNH+WTVSA Q+HP +++CDE + QEL+VKTVKYF L
Sbjct: 199 VMILVTGHNKALALEAAVEGCVNHLWTVSALQLHPKAVIVCDEPSQQELKVKTVKYFSEL 258
>sp|Q65QE8|NAGB_MANSM Glucosamine-6-phosphate deaminase OS=Mannheimia succiniciproducens
(strain MBEL55E) GN=nagB PE=3 SV=1
Length = 267
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/60 (63%), Positives = 46/60 (76%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VM+LITG KA AL +E VNH+WTVSA Q+H +I++CDE ATQEL+VKTVKYF L
Sbjct: 199 VMLLITGHQKALALQACVEGAVNHLWTVSALQLHRHSIVVCDEPATQELKVKTVKYFTEL 258
>sp|C5BGA6|NAGB_EDWI9 Glucosamine-6-phosphate deaminase OS=Edwardsiella ictaluri (strain
93-146) GN=nagB PE=3 SV=1
Length = 266
Score = 84.0 bits (206), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/60 (58%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+TG K+ AL A+E VNHMWT+SA Q+HP ++++CD+ AT EL+VKTV YF+ L
Sbjct: 199 VMILVTGHAKSLALQAAVEGSVNHMWTISALQLHPKSVVVCDQPATMELKVKTVNYFREL 258
>sp|Q7VKN1|NAGB_HAEDU Glucosamine-6-phosphate deaminase OS=Haemophilus ducreyi (strain
35000HP / ATCC 700724) GN=nagB PE=3 SV=1
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/60 (61%), Positives = 48/60 (80%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
+M+LITG +KA AL +E VNH+WTVSA Q+H +I++CDE ATQEL+VKTVKYF +L
Sbjct: 199 IMLLITGYNKALALQAGVEGSVNHLWTVSALQLHERSIIVCDEPATQELKVKTVKYFTQL 258
>sp|B0BSS6|NAGB_ACTPJ Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=nagB PE=3
SV=1
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VM+LITG +KA AL +E VNHMWTVSA Q+H I++CDE ATQEL+VKTVKYF +L
Sbjct: 199 VMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIVVCDEPATQELKVKTVKYFTQL 258
>sp|B3GZ06|NAGB_ACTP7 Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=nagB PE=3
SV=1
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VM+LITG +KA AL +E VNHMWTVSA Q+H I++CDE ATQEL+VKTVKYF +L
Sbjct: 199 VMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIVVCDEPATQELKVKTVKYFTQL 258
>sp|A3N353|NAGB_ACTP2 Glucosamine-6-phosphate deaminase OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=nagB PE=3
SV=1
Length = 267
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/60 (65%), Positives = 47/60 (78%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VM+LITG +KA AL +E VNHMWTVSA Q+H I++CDE ATQEL+VKTVKYF +L
Sbjct: 199 VMLLITGYNKALALQACVEGSVNHMWTVSALQLHKRGIVVCDEPATQELKVKTVKYFTQL 258
>sp|C6DBY4|NAGB_PECCP Glucosamine-6-phosphate deaminase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+TG +KA AL A+E VNHMWT+S Q+H IM+CDE +T EL+VKTVKYF+ L
Sbjct: 199 VMILVTGRNKALALQAAVEGNVNHMWTISCLQLHAKAIMVCDEPSTMELKVKTVKYFREL 258
>sp|Q3Z4C2|NAGB_SHISS Glucosamine-6-phosphate deaminase OS=Shigella sonnei (strain Ss046)
GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|Q324M6|NAGB_SHIBS Glucosamine-6-phosphate deaminase OS=Shigella boydii serotype 4
(strain Sb227) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B2TU53|NAGB_SHIB3 Glucosamine-6-phosphate deaminase OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B7LKT5|NAGB_ESCF3 Glucosamine-6-phosphate deaminase OS=Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CDC 0568-73) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|Q1REP9|NAGB_ECOUT Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain UTI89
/ UPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B1LLC0|NAGB_ECOSM Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B6HYN6|NAGB_ECOSE Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain SE11)
GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B7N9S4|NAGB_ECOLU Glucosamine-6-phosphate deaminase OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|P0A759|NAGB_ECOLI Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain K12)
GN=nagB PE=1 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B1IY50|NAGB_ECOLC Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|Q0TK13|NAGB_ECOL5 Glucosamine-6-phosphate deaminase OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|A1A8T7|NAGB_ECOK1 Glucosamine-6-phosphate deaminase OS=Escherichia coli O1:K1 / APEC
GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|A7ZXT7|NAGB_ECOHS Glucosamine-6-phosphate deaminase OS=Escherichia coli O9:H4 (strain
HS) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B1X6L1|NAGB_ECODH Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain K12 /
DH10B) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|C4ZWF4|NAGB_ECOBW Glucosamine-6-phosphate deaminase OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
>sp|B7M5J6|NAGB_ECO8A Glucosamine-6-phosphate deaminase OS=Escherichia coli O8 (strain
IAI1) GN=nagB PE=3 SV=1
Length = 266
Score = 83.6 bits (205), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/60 (60%), Positives = 45/60 (75%)
Query: 7 VMILITGSHKAFALYKAIEEGVNHMWTVSAFQMHPCTIMICDEDATQELRVKTVKYFKRL 66
VMIL+ GS KA AL A+E VNHMWT+S Q+HP IM+CDE +T EL+VKT++YF L
Sbjct: 199 VMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNEL 258
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,413,599
Number of Sequences: 539616
Number of extensions: 547123
Number of successful extensions: 1712
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1541
Number of HSP's gapped (non-prelim): 171
length of query: 66
length of database: 191,569,459
effective HSP length: 38
effective length of query: 28
effective length of database: 171,064,051
effective search space: 4789793428
effective search space used: 4789793428
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)