BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2123
(143 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328717151|ref|XP_003246132.1| PREDICTED: paired mesoderm homeobox protein 1-like [Acyrthosiphon
pisum]
Length = 244
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/110 (64%), Positives = 83/110 (75%), Gaps = 8/110 (7%)
Query: 22 RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAK 81
+RK KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA++VCLSEARVQVWFQNRRAK
Sbjct: 41 QRKSKPRRNRTTFSSCQLRALEKVFERTHYPDAFVREELARRVCLSEARVQVWFQNRRAK 100
Query: 82 FRRNERNFISHRN--------LDAPTSEQPLPPCTNATPLSSAPPSSSHS 123
FRRNER+ +S N +P EQPL P +N + + PP ++ S
Sbjct: 101 FRRNERSSLSRNNPTLSTVPDCRSPNVEQPLLPRSNTNVVHAEPPFTAGS 150
>gi|242020400|ref|XP_002430643.1| Ultrabithorax, putative [Pediculus humanus corporis]
gi|212515815|gb|EEB17905.1| Ultrabithorax, putative [Pediculus humanus corporis]
Length = 270
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 70/81 (86%), Gaps = 2/81 (2%)
Query: 14 EDDDY-DYERRK-PKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
E DDY D E K KPRRNRTTF + QL+ALE+VFE+THYPDAFVREELAK+V LSEARV
Sbjct: 71 EKDDYVDGENGKMKKPRRNRTTFTTIQLSALERVFEKTHYPDAFVREELAKRVGLSEARV 130
Query: 72 QVWFQNRRAKFRRNERNFISH 92
QVWFQNRRAKFRRNER+ ISH
Sbjct: 131 QVWFQNRRAKFRRNERSLISH 151
>gi|443703131|gb|ELU00842.1| hypothetical protein CAPTEDRAFT_171492 [Capitella teleta]
Length = 195
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 84/138 (60%), Gaps = 26/138 (18%)
Query: 22 RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAK 81
++K K RRNRTTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAK
Sbjct: 27 KKKQKQRRNRTTFNSQQLAALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAK 86
Query: 82 FRRNERNFISHRNL----------------DAPTSEQPLPPCTNAT-PLSSAPPSSSHSF 124
FRRNERN ++ R+ T EQPL NAT PL H
Sbjct: 87 FRRNERNVLAQRSTMYGSGGAVGAVRPAESGCGTGEQPLSVRPNATQPL--------HGG 138
Query: 125 DFCAMPHSQCNSTCTFTS 142
D+ + +S S C
Sbjct: 139 DYASW-NSPAGSPCALAG 155
>gi|195429318|ref|XP_002062710.1| GK19597 [Drosophila willistoni]
gi|194158795|gb|EDW73696.1| GK19597 [Drosophila willistoni]
Length = 288
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 112 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 171
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSF 124
ER+ R L Q +P P+S+A + H +
Sbjct: 172 ERSVSGSRPLMDHAGSQLVP-----APISTASTGNMHKY 205
>gi|195489018|ref|XP_002092559.1| GE11607 [Drosophila yakuba]
gi|194178660|gb|EDW92271.1| GE11607 [Drosophila yakuba]
Length = 286
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 66/84 (78%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 126 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 185
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LDA P P N
Sbjct: 186 ERSVGSRPLLDAAPQLVPAPISNN 209
>gi|195380555|ref|XP_002049036.1| GJ20984 [Drosophila virilis]
gi|194143833|gb|EDW60229.1| GJ20984 [Drosophila virilis]
Length = 288
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 133 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 192
Query: 86 ERNF-ISHRNLDAPTSEQPLPPCTNATP---LSSAPPSSSHSFDFCAMPHSQC 134
ER+ I LD T P P N L+ + P +++ +F + C
Sbjct: 193 ERSVSIGRPLLDTATQLVPAPMPNNIHKYPNLTHSAPPGAYALNFAPLELRSC 245
>gi|24659086|ref|NP_611756.1| CG9876 [Drosophila melanogaster]
gi|21626590|gb|AAF46956.2| CG9876 [Drosophila melanogaster]
gi|94400579|gb|ABF17914.1| FI01017p [Drosophila melanogaster]
Length = 275
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 65/84 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LD P P N
Sbjct: 176 ERSVGSRTLLDTAPQLVPAPISNN 199
>gi|33589354|gb|AAQ22444.1| RE60081p [Drosophila melanogaster]
Length = 275
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 65/84 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LD P P N
Sbjct: 176 ERSVGSRTLLDTAPQLVPAPISNN 199
>gi|269784949|ref|NP_001161626.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
gi|268054257|gb|ACY92615.1| paired mesoderm homeobox 2-like protein [Saccoglossus kowalevskii]
Length = 242
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 80/113 (70%), Gaps = 11/113 (9%)
Query: 22 RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAK 81
++ K RR+RTTF ++QL ALEKVFERTHYPDAFVREELAKKV LSEARVQVWFQNRRAK
Sbjct: 94 KKAKKQRRSRTTFTTNQLGALEKVFERTHYPDAFVREELAKKVDLSEARVQVWFQNRRAK 153
Query: 82 FRRNERNFISHRNLDAPT--------SEQPL-PPCTNATP--LSSAPPSSSHS 123
+RRNERN ++ R P + PL P T A+P L+ P++SH
Sbjct: 154 YRRNERNVLAARQKLYPAPIADNNILEQSPLTAPSTLASPDYLTWTNPANSHG 206
>gi|195346972|ref|XP_002040028.1| GM15584 [Drosophila sechellia]
gi|194135377|gb|EDW56893.1| GM15584 [Drosophila sechellia]
Length = 273
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 65/84 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LD P P N
Sbjct: 176 ERSVGSRPLLDTAPQLVPAPISNN 199
>gi|195057533|ref|XP_001995277.1| GH23067 [Drosophila grimshawi]
gi|193899483|gb|EDV98349.1| GH23067 [Drosophila grimshawi]
Length = 285
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/113 (59%), Positives = 78/113 (69%), Gaps = 4/113 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 136 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 195
Query: 86 ERNF-ISHRNLDAPTS--EQPLPPCTNATP-LSSAPPSSSHSFDFCAMPHSQC 134
ER+ I L+ T P+P + P L+ P +++ +F + C
Sbjct: 196 ERSVSIGRPILETATQLVAAPIPNNMHKYPNLTHGAPPGAYALNFAPLELRSC 248
>gi|195149884|ref|XP_002015885.1| GL11298 [Drosophila persimilis]
gi|194109732|gb|EDW31775.1| GL11298 [Drosophila persimilis]
Length = 269
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 65/80 (81%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 112 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 171
Query: 86 ERNFISHRNLDAPTSEQPLP 105
ER+ + LD + P P
Sbjct: 172 ERSVGARPLLDTASQLVPAP 191
>gi|195124191|ref|XP_002006577.1| GI21136 [Drosophila mojavensis]
gi|193911645|gb|EDW10512.1| GI21136 [Drosophila mojavensis]
Length = 277
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 82/135 (60%), Gaps = 14/135 (10%)
Query: 4 DWMLTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKK 63
DW L C G KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA K
Sbjct: 112 DW-LGCGCSGHSR---------KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATK 161
Query: 64 VCLSEARVQVWFQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATP---LSSAPPS 119
V LSEARVQVWFQNRRAKFRRNER+ R LD T P P N L+ + P
Sbjct: 162 VHLSEARVQVWFQNRRAKFRRNERSVSLGRPLLDTSTQLVPAPVPNNMHKYPNLTHSAPP 221
Query: 120 SSHSFDFCAMPHSQC 134
+++ +F + C
Sbjct: 222 GAYALNFAPLELRSC 236
>gi|195585928|ref|XP_002082730.1| GD25082 [Drosophila simulans]
gi|194194739|gb|EDX08315.1| GD25082 [Drosophila simulans]
Length = 275
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 65/84 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 116 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 175
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LD P P N
Sbjct: 176 ERSVGSRPLLDTAPQLVPAPISNN 199
>gi|198456647|ref|XP_001360401.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
gi|198135692|gb|EAL24976.2| GA22090 [Drosophila pseudoobscura pseudoobscura]
Length = 269
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/80 (76%), Positives = 65/80 (81%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 112 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 171
Query: 86 ERNFISHRNLDAPTSEQPLP 105
ER+ + LD + P P
Sbjct: 172 ERSVGARPLLDTASQLVPAP 191
>gi|194884904|ref|XP_001976349.1| GG20068 [Drosophila erecta]
gi|190659536|gb|EDV56749.1| GG20068 [Drosophila erecta]
Length = 281
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 118 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 177
Query: 86 ERNFISHRNLDAPTSEQPLP-PCTNA 110
ER+ S LD T+ Q +P P +N+
Sbjct: 178 ERSVGSRPLLD--TAPQLVPAPISNS 201
>gi|357620518|gb|EHJ72676.1| putative Ultrabithorax [Danaus plexippus]
Length = 330
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/94 (63%), Positives = 72/94 (76%), Gaps = 6/94 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG++D+ + KPRRNRTTF S QL ALEKVFE+THYPDAFVRE+LA +V L+EARV
Sbjct: 120 DGKNDE------RKKPRRNRTTFTSQQLAALEKVFEKTHYPDAFVREDLASRVNLTEARV 173
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP 105
QVWFQNRRAKFRRNER+ +S S +P+P
Sbjct: 174 QVWFQNRRAKFRRNERSALSSHRTSTQNSPEPIP 207
>gi|194756178|ref|XP_001960356.1| GF13323 [Drosophila ananassae]
gi|190621654|gb|EDV37178.1| GF13323 [Drosophila ananassae]
Length = 279
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/84 (75%), Positives = 65/84 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF+S QL ALEKVFERTHYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 120 KPRRNRTTFSSAQLTALEKVFERTHYPDAFVREELATKVHLSEARVQVWFQNRRAKFRRN 179
Query: 86 ERNFISHRNLDAPTSEQPLPPCTN 109
ER+ S LD P P N
Sbjct: 180 ERSVGSRPLLDPAPQLVPAPLGNN 203
>gi|291414337|ref|XP_002723417.1| PREDICTED: paired related homeobox 2, partial [Oryctolagus
cuniculus]
Length = 223
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/91 (67%), Positives = 71/91 (78%), Gaps = 7/91 (7%)
Query: 23 RKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKF 82
++ K RRNRTTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKF
Sbjct: 70 KRKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKF 129
Query: 83 RRNERNFISHRNLDAPTS-------EQPLPP 106
RRNER +++R+ S EQP+ P
Sbjct: 130 RRNERAMLANRSASLLKSYSQEAAMEQPVAP 160
>gi|72124445|ref|XP_787382.1| PREDICTED: paired mesoderm homeobox protein 1-like
[Strongylocentrotus purpuratus]
Length = 327
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 75/115 (65%), Gaps = 9/115 (7%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
C D+ + + RRNRTTF + QL+ALEKVFERTHYPDAF+REELAKKV L+EAR
Sbjct: 150 CGSLSDNGIISAKSKRQRRNRTTFTTAQLDALEKVFERTHYPDAFLREELAKKVDLTEAR 209
Query: 71 VQVWFQNRRAKFRRNERNFISHRN-------LDAPTSEQPLP--PCTNATPLSSA 116
VQVWFQNRRAKFRRNER+ + + + EQP+ PC T L +
Sbjct: 210 VQVWFQNRRAKFRRNERSLQAAKVAAARRRPFNGVNVEQPVAPRPCPTTTELGGS 264
>gi|355713903|gb|AES04824.1| paired related homeobox 1 [Mustela putorius furo]
Length = 109
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 8/91 (8%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFR
Sbjct: 1 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFR 60
Query: 84 RNERNFISHRNL--------DAPTSEQPLPP 106
RNER ++++N D EQP+ P
Sbjct: 61 RNERAMLANKNASLLKSYSGDVTAVEQPIVP 91
>gi|301622984|ref|XP_002940803.1| PREDICTED: paired mesoderm homeobox protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 248
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/93 (63%), Positives = 68/93 (73%), Gaps = 8/93 (8%)
Query: 28 RRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RRNRTTFNS QL ALE+VFERTHYPDAFVRE+LA++V LSEARVQVWFQNRRAKFRRNER
Sbjct: 95 RRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVSLSEARVQVWFQNRRAKFRRNER 154
Query: 88 NFISHRNL--------DAPTSEQPLPPCTNATP 112
++ R+ D +Q P + TP
Sbjct: 155 AMLASRSATHLKSYSQDTGAEQQVSPRASTLTP 187
>gi|321459621|gb|EFX70672.1| hypothetical protein DAPPUDRAFT_36992 [Daphnia pulex]
Length = 74
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/62 (90%), Positives = 59/62 (95%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF S QL+ALEKVFERTHYPDAFVRE+LAK+V LSEARVQVWFQNRRAKFRRN
Sbjct: 13 KPRRNRTTFTSAQLSALEKVFERTHYPDAFVREDLAKRVSLSEARVQVWFQNRRAKFRRN 72
Query: 86 ER 87
ER
Sbjct: 73 ER 74
>gi|355713906|gb|AES04825.1| Paired mesoderm homeobox protein 2 [Mustela putorius furo]
Length = 147
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 67/85 (78%), Gaps = 7/85 (8%)
Query: 29 RNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERN 88
RNRTTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER
Sbjct: 1 RNRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERA 60
Query: 89 FISHRNLDAPTS-------EQPLPP 106
+++R+ S EQP+ P
Sbjct: 61 MLANRSASLLKSYSQEAAIEQPVAP 85
>gi|1764092|gb|AAB39864.1| paired-like homeodomain protein PRX2 [Homo sapiens]
Length = 164
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/129 (51%), Positives = 79/129 (61%), Gaps = 18/129 (13%)
Query: 30 NRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNF 89
NRTTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER
Sbjct: 18 NRTTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAM 77
Query: 90 ISHRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPH 131
++ R+ S EQP+ P T ++P S+ PP S S
Sbjct: 78 LASRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGV 137
Query: 132 SQCNSTCTF 140
+ NS +
Sbjct: 138 NMANSIASL 146
>gi|347966006|ref|XP_321639.5| AGAP001483-PA [Anopheles gambiae str. PEST]
gi|333470253|gb|EAA01329.5| AGAP001483-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 58/62 (93%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF ++QL ALEK+FE+THYPDAFVREELA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 22 KPRRNRTTFTTNQLTALEKIFEKTHYPDAFVREELANKVGLSEARVQVWFQNRRAKFRRN 81
Query: 86 ER 87
ER
Sbjct: 82 ER 83
>gi|157107387|ref|XP_001649756.1| hypothetical protein AaeL_AAEL014848 [Aedes aegypti]
gi|108868691|gb|EAT32916.1| AAEL014848-PA, partial [Aedes aegypti]
Length = 169
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 75/117 (64%), Gaps = 16/117 (13%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF+S QL+ALE++FERTHYPDAF+REE+A KV LSEARVQVWFQNRRAKFRRN
Sbjct: 16 KLRRNRTTFSSDQLSALEQIFERTHYPDAFLREEIASKVGLSEARVQVWFQNRRAKFRRN 75
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHS-QCNSTCTFT 141
ERN Q L + A S P PH+ Q NS+ TF+
Sbjct: 76 ERNI--------NVGSQSLCAISPALHFSKTP-------KIVRSPHAEQINSSTTFS 117
>gi|359070691|ref|XP_002691720.2| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 252
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 108 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 167
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S S
Sbjct: 168 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASSPYSTVPPYSPGGSGPATPGVSM 227
Query: 134 CNSTCTF 140
NS +
Sbjct: 228 ANSIASL 234
>gi|332022452|gb|EGI62760.1| Paired mesoderm homeobox protein 2 [Acromyrmex echinatior]
Length = 249
Score = 115 bits (289), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 62/72 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFE+THYPDAFVREELA +V LSEARVQVWFQNRRAKFRRN
Sbjct: 55 RPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRN 114
Query: 86 ERNFISHRNLDA 97
ER+ R + A
Sbjct: 115 ERSSAMSRGVSA 126
>gi|449266756|gb|EMC77772.1| Paired mesoderm homeobox protein 2, partial [Columba livia]
Length = 165
Score = 115 bits (287), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 79/129 (61%), Gaps = 21/129 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 21 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 80
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T+ +P S+ P S+S A P
Sbjct: 81 NRSASLLKSYSQEAAIEQPMAPRPTALTPEYLSWTSTSPYSTVP---SYSSSGTATPTQG 137
Query: 134 CNSTCTFTS 142
N + S
Sbjct: 138 VNMANSIAS 146
>gi|383865413|ref|XP_003708168.1| PREDICTED: retinal homeobox protein Rx2-like [Megachile rotundata]
Length = 232
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 54/72 (75%), Positives = 62/72 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFERTHYPDAFVREELA +V LSEARVQVWFQNRRAKFRRN
Sbjct: 53 RPRRSRTTFSAQQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRN 112
Query: 86 ERNFISHRNLDA 97
ER+ R L +
Sbjct: 113 ERSSAISRGLSS 124
>gi|260810917|ref|XP_002600169.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
gi|229285455|gb|EEN56181.1| hypothetical protein BRAFLDRAFT_204029 [Branchiostoma floridae]
Length = 64
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/64 (87%), Positives = 58/64 (90%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL ALEKVFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFR
Sbjct: 1 KRKQRRNRTTFTSQQLQALEKVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFR 60
Query: 84 RNER 87
RNER
Sbjct: 61 RNER 64
>gi|56199803|gb|AAV84357.1| predicted NUP98/PRRX2 fusion protein, partial [Homo sapiens]
Length = 268
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 18/110 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 126 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 185
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHS 123
R+ S EQP+ P T ++P S+ PP S S
Sbjct: 186 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS 235
>gi|301758840|ref|XP_002915282.1| PREDICTED: paired mesoderm homeobox protein 2-like [Ailuropoda
melanoleuca]
Length = 202
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 58 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 117
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S A +
Sbjct: 118 NRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGGSGPAAPGVNM 177
Query: 134 CNSTCTF 140
NS +
Sbjct: 178 ANSIASL 184
>gi|281349486|gb|EFB25070.1| hypothetical protein PANDA_003237 [Ailuropoda melanoleuca]
Length = 170
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 78/127 (61%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 26 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 85
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S A +
Sbjct: 86 NRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGGSGPAAPGVNM 145
Query: 134 CNSTCTF 140
NS +
Sbjct: 146 ANSIASL 152
>gi|297685530|ref|XP_002820340.1| PREDICTED: paired mesoderm homeobox protein 2 [Pongo abelii]
Length = 190
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 46 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 105
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S S
Sbjct: 106 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVSM 165
Query: 134 CNSTCTF 140
NS +
Sbjct: 166 ANSIASL 172
>gi|405976804|gb|EKC41288.1| Paired mesoderm homeobox protein 2 [Crassostrea gigas]
Length = 275
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/80 (71%), Positives = 65/80 (81%), Gaps = 5/80 (6%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS+QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNERN ++
Sbjct: 127 TTFNSNQLAALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERNMMA 186
Query: 92 HRN-----LDAPTSEQPLPP 106
R +A EQP+ P
Sbjct: 187 QRGNMYGRQEATPIEQPITP 206
>gi|224073502|ref|XP_002195150.1| PREDICTED: paired mesoderm homeobox protein 2 [Taeniopygia guttata]
Length = 209
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 79/129 (61%), Gaps = 21/129 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 65 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 124
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T+ +P S+ P S+S A P
Sbjct: 125 NRSASLLKSYSQEAAIEQPMAPRPTALSPEYLSWTSTSPYSTVP---SYSSSGTATPTQG 181
Query: 134 CNSTCTFTS 142
N + S
Sbjct: 182 VNMANSIAS 190
>gi|444721230|gb|ELW61974.1| Paired mesoderm homeobox protein 2 [Tupaia chinensis]
Length = 195
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 51 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 110
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T ++P S+ PP S
Sbjct: 111 NRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYS 157
>gi|350411803|ref|XP_003489458.1| PREDICTED: homeobox protein ceh-8-like [Bombus impatiens]
Length = 233
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/72 (73%), Positives = 63/72 (87%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFERTHYPDAFVREELA +V LSEARVQVWFQNRRAKFRRN
Sbjct: 54 RPRRSRTTFSAQQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRN 113
Query: 86 ERNFISHRNLDA 97
ER+ +R + +
Sbjct: 114 ERSSAINRGVSS 125
>gi|126297823|ref|XP_001369196.1| PREDICTED: paired mesoderm homeobox protein 2-like [Monodelphis
domestica]
Length = 262
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 78/129 (60%), Gaps = 21/129 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 118 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 177
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T +P S+ P S+S A P
Sbjct: 178 NRSASLLKSYSQEAAIEQPMAPRPTALSPDYLSWTTTSPYSTVP---SYSPGGTATPTQG 234
Query: 134 CNSTCTFTS 142
N + S
Sbjct: 235 VNMANSIAS 243
>gi|403298582|ref|XP_003940094.1| PREDICTED: paired mesoderm homeobox protein 2 [Saimiri boliviensis
boliviensis]
Length = 275
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 131 TTFNSGQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 190
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S S
Sbjct: 191 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVSM 250
Query: 134 CNSTCTF 140
NS +
Sbjct: 251 ANSIASL 257
>gi|440894374|gb|ELR46843.1| Paired mesoderm homeobox protein 2, partial [Bos grunniens mutus]
Length = 170
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 26 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 85
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S S
Sbjct: 86 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASSPYSTVPPYSPGGSGPATPGVSM 145
Query: 134 CNSTCTF 140
NS +
Sbjct: 146 ANSIASL 152
>gi|431898898|gb|ELK07268.1| Paired mesoderm homeobox protein 2 [Pteropus alecto]
Length = 207
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 63 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 122
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T ++P S+ PP S
Sbjct: 123 NRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTTSSPYSTVPPYS 169
>gi|296482154|tpg|DAA24269.1| TPA: paired related homeobox 2-like [Bos taurus]
Length = 263
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 119 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 178
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S S
Sbjct: 179 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASSPYSTVPPYSPGGSGPATPGVSM 238
Query: 134 CNSTCTF 140
NS +
Sbjct: 239 ANSIASL 245
>gi|431916034|gb|ELK16288.1| Paired mesoderm homeobox protein 1 [Pteropus alecto]
Length = 245
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSGQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|6093750|sp|Q90963.1|PRRX2_CHICK RecName: Full=Paired mesoderm homeobox protein 2; Short=PRX-2
gi|558377|emb|CAA56136.1| Prx-2 (S8) [Gallus gallus]
Length = 165
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 21 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 80
Query: 92 HRNLDAPTS-------EQPLPP 106
+R+ S EQP+ P
Sbjct: 81 NRSASLLKSYSQEAAIEQPMAP 102
>gi|119904196|ref|XP_613967.3| PREDICTED: paired mesoderm homeobox protein 2 [Bos taurus]
Length = 253
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 109 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 168
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
+R+ S EQP+ P T ++P S+ PP S S
Sbjct: 169 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASSPYSTVPPYSPGGSGPATPGVSM 228
Query: 134 CNSTCTF 140
NS +
Sbjct: 229 ANSIASL 235
>gi|301608519|ref|XP_002933801.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 248
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 102 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 161
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 162 NKNASLLKSYAGDVTAVEQPIVP 184
>gi|426363315|ref|XP_004048788.1| PREDICTED: paired mesoderm homeobox protein 2 [Gorilla gorilla
gorilla]
Length = 269
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 18/110 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 125 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 184
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHS 123
R+ S EQP+ P T ++P S+ PP S S
Sbjct: 185 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS 234
>gi|444724308|gb|ELW64917.1| Paired mesoderm homeobox protein 1 [Tupaia chinensis]
Length = 257
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 111 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 170
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 171 NKNASLLKSYSGDVTAVEQPIVP 193
>gi|449509247|ref|XP_002190174.2| PREDICTED: paired mesoderm homeobox protein 1-like [Taeniopygia
guttata]
Length = 219
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/123 (52%), Positives = 79/123 (64%), Gaps = 18/123 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 73 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 132
Query: 92 HRNL--------DAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQC---NSTCTF 140
+N D EQP+ P AP + + A P+S ++TCT
Sbjct: 133 SKNASLLKSYSGDVTAVEQPIVP-------RPAPRPTDYLSWGTASPYSAMATYSATCTN 185
Query: 141 TSP 143
TSP
Sbjct: 186 TSP 188
>gi|426332696|ref|XP_004027933.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 245
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|7706659|ref|NP_057391.1| paired mesoderm homeobox protein 2 [Homo sapiens]
gi|109110036|ref|XP_001107634.1| PREDICTED: paired mesoderm homeobox protein 2 [Macaca mulatta]
gi|114627151|ref|XP_520310.2| PREDICTED: paired mesoderm homeobox protein 2 [Pan troglodytes]
gi|12644475|sp|Q99811.2|PRRX2_HUMAN RecName: Full=Paired mesoderm homeobox protein 2; AltName:
Full=Paired-related homeobox protein 2; Short=PRX-2
gi|6578131|gb|AAF17708.1|AF061970_1 paired related homeobox protein [Homo sapiens]
gi|15779165|gb|AAH14645.1| Paired related homeobox 2 [Homo sapiens]
gi|119608307|gb|EAW87901.1| paired related homeobox 2 [Homo sapiens]
gi|410211692|gb|JAA03065.1| paired related homeobox 2 [Pan troglodytes]
gi|410254442|gb|JAA15188.1| paired related homeobox 2 [Pan troglodytes]
gi|410307870|gb|JAA32535.1| paired related homeobox 2 [Pan troglodytes]
gi|410352553|gb|JAA42880.1| paired related homeobox 2 [Pan troglodytes]
Length = 253
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 18/110 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 109 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 168
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHS 123
R+ S EQP+ P T ++P S+ PP S S
Sbjct: 169 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS 218
>gi|395825057|ref|XP_003785760.1| PREDICTED: paired mesoderm homeobox protein 1 [Otolemur garnettii]
Length = 245
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|354486828|ref|XP_003505580.1| PREDICTED: paired mesoderm homeobox protein 1-like, partial
[Cricetulus griseus]
Length = 231
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 85 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 144
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 145 NKNASLLKSYSGDVTAVEQPIVP 167
>gi|395844588|ref|XP_003795040.1| PREDICTED: paired mesoderm homeobox protein 2 [Otolemur garnettii]
Length = 265
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 121 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 180
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T ++P S+ PP S
Sbjct: 181 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASSPYSTVPPYS 227
>gi|149707864|ref|XP_001495768.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 1 [Equus
caballus]
Length = 245
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|126306216|ref|XP_001364765.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 1
[Monodelphis domestica]
gi|395530769|ref|XP_003767460.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1
[Sarcophilus harrisii]
Length = 245
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|348565751|ref|XP_003468666.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
1-like [Cavia porcellus]
Length = 245
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|397503808|ref|XP_003822510.1| PREDICTED: paired mesoderm homeobox protein 2 [Pan paniscus]
Length = 188
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 44 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 103
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S +
Sbjct: 104 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNM 163
Query: 134 CNSTCTF 140
NS +
Sbjct: 164 ANSIASL 170
>gi|148707331|gb|EDL39278.1| paired related homeobox 1, isoform CRA_a [Mus musculus]
Length = 244
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 98 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 157
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 158 NKNASLLKSYSGDVTAVEQPIVP 180
>gi|6755116|ref|NP_035257.1| paired mesoderm homeobox protein 1 isoform a [Mus musculus]
gi|24429584|ref|NP_722543.1| paired mesoderm homeobox protein 1 [Rattus norvegicus]
gi|73960640|ref|XP_850725.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Canis
lupus familiaris]
gi|291397450|ref|XP_002715516.1| PREDICTED: paired mesoderm homeobox 1 isoform 1 [Oryctolagus
cuniculus]
gi|301766378|ref|XP_002918609.1| PREDICTED: paired mesoderm homeobox protein 1-like [Ailuropoda
melanoleuca]
gi|410985857|ref|XP_003999232.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Felis
catus]
gi|51702771|sp|P63014.1|PRRX1_RAT RecName: Full=Paired mesoderm homeobox protein 1; AltName:
Full=Paired-related homeobox protein 1; Short=PRX-1;
Short=rHox
gi|51702789|sp|P63013.1|PRRX1_MOUSE RecName: Full=Paired mesoderm homeobox protein 1; AltName:
Full=Homeobox protein K-2; AltName: Full=Homeobox
protein mHox; AltName: Full=Paired-related homeobox
protein 1; Short=PRX-1
gi|51362|emb|CAA42410.1| DNA-binding protein [Mus musculus]
gi|1836044|gb|AAB46839.1| rHox protein [Rattus sp.]
gi|149058222|gb|EDM09379.1| paired related homeobox 1, isoform CRA_c [Rattus norvegicus]
gi|281348247|gb|EFB23831.1| hypothetical protein PANDA_007098 [Ailuropoda melanoleuca]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|344271692|ref|XP_003407671.1| PREDICTED: paired mesoderm homeobox protein 2-like [Loxodonta
africana]
Length = 254
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 110 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 169
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
R+ S EQP+ P T ++P S+ PP S
Sbjct: 170 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYS 216
>gi|296229826|ref|XP_002760423.1| PREDICTED: paired mesoderm homeobox protein 1 [Callithrix jacchus]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|387541874|gb|AFJ71564.1| paired mesoderm homeobox protein 1 isoform pmx-1b [Macaca mulatta]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|12707577|ref|NP_073207.1| paired mesoderm homeobox protein 1 isoform pmx-1b [Homo sapiens]
gi|109019461|ref|XP_001097390.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 3 [Macaca
mulatta]
gi|114565328|ref|XP_001141191.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Pan
troglodytes]
gi|297662742|ref|XP_002809848.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Pongo
abelii]
gi|332219535|ref|XP_003258910.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Nomascus
leucogenys]
gi|397508499|ref|XP_003824690.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Pan
paniscus]
gi|402858180|ref|XP_003893600.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Papio
anubis]
gi|403266528|ref|XP_003925430.1| PREDICTED: paired mesoderm homeobox protein 1 [Saimiri boliviensis
boliviensis]
gi|6174916|sp|P54821.2|PRRX1_HUMAN RecName: Full=Paired mesoderm homeobox protein 1; AltName:
Full=Homeobox protein PHOX1; AltName:
Full=Paired-related homeobox protein 1; Short=PRX-1
gi|50960676|gb|AAH74993.1| Paired related homeobox 1 [Homo sapiens]
gi|119611289|gb|EAW90883.1| paired related homeobox 1, isoform CRA_b [Homo sapiens]
gi|167773485|gb|ABZ92177.1| paired related homeobox 1 [synthetic construct]
gi|197692627|dbj|BAG70277.1| paired mesoderm homeobox 1 isoform pmx-1b [Homo sapiens]
gi|261858268|dbj|BAI45656.1| paired related homeobox 1 [synthetic construct]
gi|355559030|gb|EHH15810.1| hypothetical protein EGK_01958 [Macaca mulatta]
gi|355746182|gb|EHH50807.1| hypothetical protein EGM_01690 [Macaca fascicularis]
gi|410217266|gb|JAA05852.1| paired related homeobox 1 [Pan troglodytes]
gi|410303716|gb|JAA30458.1| paired related homeobox 1 [Pan troglodytes]
gi|410355209|gb|JAA44208.1| paired related homeobox 1 [Pan troglodytes]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|126165288|ref|NP_001075208.1| paired mesoderm homeobox protein 1 [Bos taurus]
gi|126010747|gb|AAI33624.1| Paired related homeobox 1 [Bos taurus]
gi|296479238|tpg|DAA21353.1| TPA: paired mesoderm homeobox 1 [Bos taurus]
gi|440900426|gb|ELR51570.1| Paired mesoderm homeobox protein 1 [Bos grunniens mutus]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|301608521|ref|XP_002933802.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 248
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 102 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 161
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 162 NKNASLLKSYAGDVTAVEQPIVP 184
>gi|363740620|ref|XP_415476.3| PREDICTED: paired mesoderm homeobox protein 2 [Gallus gallus]
Length = 247
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 103 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 92 HRNLDAPTS-------EQPLPP 106
+R+ S EQP+ P
Sbjct: 163 NRSASLLKSYSQEAAIEQPMAP 184
>gi|355567408|gb|EHH23749.1| hypothetical protein EGK_07287, partial [Macaca mulatta]
gi|355753004|gb|EHH57050.1| hypothetical protein EGM_06610, partial [Macaca fascicularis]
Length = 167
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 23 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 82
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S +
Sbjct: 83 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNM 142
Query: 134 CNSTCTF 140
NS +
Sbjct: 143 ANSIASL 149
>gi|395506283|ref|XP_003757464.1| PREDICTED: paired mesoderm homeobox protein 2 [Sarcophilus
harrisii]
Length = 243
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNLDAPTS-------EQPLPP 106
+R+ S EQP+ P
Sbjct: 159 NRSASLLKSYSQEAAIEQPMAP 180
>gi|426239651|ref|XP_004013733.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Ovis
aries]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|110754946|ref|XP_001120105.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis mellifera]
Length = 231
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 62/71 (87%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFERTHYPDAFVREELA +V LSEARVQVWFQNRRAKFRRN
Sbjct: 55 RPRRSRTTFSAEQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRN 114
Query: 86 ERNFISHRNLD 96
ER+ +R +
Sbjct: 115 ERSSAINRGVS 125
>gi|198427843|ref|XP_002120103.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 510
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 61/70 (87%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
+ K RR RTTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFR
Sbjct: 327 RKKQRRTRTTFNSGQLAALERVFERTHYPDAFVREELARRVGLSEARVQVWFQNRRAKFR 386
Query: 84 RNERNFISHR 93
R ER+ ++ R
Sbjct: 387 RAERSLLTSR 396
>gi|41056029|ref|NP_956344.1| paired mesoderm homeobox 1b [Danio rerio]
gi|40352970|gb|AAH64671.1| Paired related homeobox 1b [Danio rerio]
Length = 245
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 101 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 160
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 161 SKNASLLKSYSGDVTAVEQPIVP 183
>gi|344254225|gb|EGW10329.1| Paired mesoderm homeobox protein 1 [Cricetulus griseus]
Length = 198
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 52 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 111
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 112 NKNASLLKSYSGDVTAVEQPIVP 134
>gi|326930336|ref|XP_003211303.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2-like [Meleagris gallopavo]
Length = 247
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 103 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 92 HRNLDAPTS-------EQPLPP 106
+R+ S EQP+ P
Sbjct: 163 NRSASLLKSYSQEAAIEQPMAP 184
>gi|121483837|gb|ABM54213.1| PRRX2 [Pan paniscus]
Length = 166
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 22 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 81
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S +
Sbjct: 82 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNM 141
Query: 134 CNSTCTF 140
NS +
Sbjct: 142 ANSIASL 148
>gi|120974103|gb|ABM46639.1| PRRX2 [Gorilla gorilla]
Length = 166
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 22 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 81
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S +
Sbjct: 82 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPATPGVNM 141
Query: 134 CNSTCTF 140
NS +
Sbjct: 142 ANSIASL 148
>gi|380030526|ref|XP_003698897.1| PREDICTED: homeobox protein aristaless-like 4-like [Apis florea]
Length = 230
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 62/71 (87%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFERTHYPDAFVREELA +V LSEARVQVWFQNRRAKFRRN
Sbjct: 54 RPRRSRTTFSAEQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRN 113
Query: 86 ERNFISHRNLD 96
ER+ +R +
Sbjct: 114 ERSSAINRGVS 124
>gi|86355073|dbj|BAE78771.1| homeobox protein Prx1 [Pelodiscus sinensis]
Length = 180
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 61 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 120
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 121 NKNASLLKSYSGDVTAVEQPIVP 143
>gi|417414301|gb|JAA53448.1| Putative transcription factor phox2/arix, partial [Desmodus
rotundus]
Length = 225
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNTSLLKSYSGDVTAVEQPIVP 181
>gi|307215496|gb|EFN90148.1| Paired mesoderm homeobox protein 2 [Harpegnathos saltator]
Length = 274
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 62/72 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+PRR+RTTF++ QL ALE+VFE+THYPDAFVREELA +V L+EARVQVWFQNRRAKFRRN
Sbjct: 55 RPRRSRTTFSAQQLAALERVFEKTHYPDAFVREELATRVSLTEARVQVWFQNRRAKFRRN 114
Query: 86 ERNFISHRNLDA 97
ER+ R + A
Sbjct: 115 ERSSALSRGVSA 126
>gi|56118307|ref|NP_001007822.1| paired mesoderm homeobox protein 1 [Gallus gallus]
gi|6174915|sp|Q05437.2|PRRX1_CHICK RecName: Full=Paired mesoderm homeobox protein 1; AltName:
Full=GMHOX; AltName: Full=Homeobox protein MHOX;
AltName: Full=Paired-related homeobox protein 1;
Short=PRX-1
gi|545360|gb|AAB29880.1| homeodomain protein [Gallus gallus]
Length = 245
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 159 SKNASLLKSYSGDVTAVEQPIVP 181
>gi|449268195|gb|EMC79065.1| Paired mesoderm homeobox protein 1 [Columba livia]
Length = 245
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 159 SKNASLLKSYSGDVTAVEQPIVP 181
>gi|348522632|ref|XP_003448828.1| PREDICTED: paired mesoderm homeobox protein 1-like [Oreochromis
niloticus]
Length = 245
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 101 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 160
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 161 SKNASLLKSYSGDVTAVEQPIVP 183
>gi|70909354|ref|NP_001020741.1| paired mesoderm homeobox protein 1 isoform c [Mus musculus]
gi|149058220|gb|EDM09377.1| paired related homeobox 1, isoform CRA_a [Rattus norvegicus]
Length = 200
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|345806252|ref|XP_548419.3| PREDICTED: paired mesoderm homeobox protein 2 [Canis lupus
familiaris]
Length = 214
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 70 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 129
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T ++P S+ PP S
Sbjct: 130 NRSATLLKSYSQEAAIEQPVAPRPTALSPDYLSWTTSSPYSTVPPYS 176
>gi|148707333|gb|EDL39280.1| paired related homeobox 1, isoform CRA_c [Mus musculus]
Length = 199
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 98 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 157
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 158 NKNASLLKSYSGDVTAVEQPIVP 180
>gi|441623744|ref|XP_003264034.2| PREDICTED: paired mesoderm homeobox protein 2 [Nomascus leucogenys]
Length = 180
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 89/140 (63%), Gaps = 20/140 (14%)
Query: 4 DWML-TLRCD-GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELA 61
W+L TLRC+ +RK K RRNRTTFNS QL ALE+VFERTHYPDAFVREELA
Sbjct: 6 GWVLGTLRCECPSPGRGSAAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELA 65
Query: 62 KKVCLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTS-------EQPLPP-------- 106
++V LSEARVQVWFQNRRAKFRRNER ++ R+ S EQP+ P
Sbjct: 66 RRVNLSEARVQVWFQNRRAKFRRNERAMLASRSASLLKSYSQEAAIEQPVAPRPTALSPD 125
Query: 107 ---CTNATPLSSAPPSSSHS 123
T ++P S+ PP S S
Sbjct: 126 YLSWTASSPYSTVPPYSPGS 145
>gi|18308154|gb|AAL67846.1| paired-related homeobox [Gallus gallus]
Length = 214
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 159 SKNASLLKSYSGDVTAVEQPIVP 181
>gi|338720332|ref|XP_001499709.3| PREDICTED: paired mesoderm homeobox protein 2-like [Equus caballus]
Length = 297
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 153 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 212
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
R+ S EQP+ P T ++P S+ PP S
Sbjct: 213 SRSASLLKSYSQEAAVEQPVAPRPTALSPDYLSWTASSPYSTVPPYS 259
>gi|350583188|ref|XP_003481450.1| PREDICTED: paired mesoderm homeobox protein 1-like [Sus scrofa]
Length = 245
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVW+QNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWYQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|350579710|ref|XP_003122277.3| PREDICTED: paired mesoderm homeobox protein 2-like [Sus scrofa]
Length = 381
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 72/107 (67%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 207 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 266
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T + P S+ PP S
Sbjct: 267 NRSASLLKSYSQEAAIEQPVAPRPTTLSPDYLSWTASAPYSTVPPYS 313
>gi|390458435|ref|XP_002743439.2| PREDICTED: paired mesoderm homeobox protein 2 [Callithrix jacchus]
Length = 185
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 18/110 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 41 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 100
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHS 123
R+ S EQP+ P T ++P S+ PP S S
Sbjct: 101 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS 150
>gi|270002762|gb|EEZ99209.1| hypothetical protein TcasGA2_TC000527 [Tribolium castaneum]
Length = 244
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 58/64 (90%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRRNRTTF + QL ALEKVFE+THYPDAFVRE+LA KV LSEARVQVWFQNRRAKFRRN
Sbjct: 64 KPRRNRTTFTTVQLAALEKVFEKTHYPDAFVREDLAAKVNLSEARVQVWFQNRRAKFRRN 123
Query: 86 ERNF 89
ER+
Sbjct: 124 ERSL 127
>gi|402896337|ref|XP_003911259.1| PREDICTED: paired mesoderm homeobox protein 2 [Papio anubis]
Length = 258
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 77/127 (60%), Gaps = 18/127 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 114 TTFNSSQLQALERVFERTHYPDAFVREELAQRVNLSEARVQVWFQNRRAKFRRNERAMLA 173
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHSFDFCAMPHSQ 133
R+ S EQP+ P T ++P S+ PP S S +
Sbjct: 174 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGSSGPTTPGVNM 233
Query: 134 CNSTCTF 140
NS +
Sbjct: 234 ANSIASL 240
>gi|326924836|ref|XP_003208631.1| PREDICTED: paired mesoderm homeobox protein 1-like [Meleagris
gallopavo]
Length = 178
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 90/142 (63%), Gaps = 18/142 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+D E++K K RRNRTTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQ
Sbjct: 13 GDDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQ 72
Query: 73 VWFQNRRAKFRRNERNFISHRNL--------DAPTSEQPLPPCTNATPLSSAPPSSSHSF 124
VWFQNRRAKFRRNER ++ +N D EQP+ P AP + +
Sbjct: 73 VWFQNRRAKFRRNERAMLASKNASLLKSYSGDVTAVEQPIVP-------RPAPRPTDYLS 125
Query: 125 DFCAMPHSQC---NSTCTFTSP 143
A P+S ++TCT SP
Sbjct: 126 WGTASPYSAMATYSTTCTNASP 147
>gi|426332694|ref|XP_004027932.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Gorilla
gorilla gorilla]
Length = 217
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|344258469|gb|EGW14573.1| Paired mesoderm homeobox protein 2 [Cricetulus griseus]
Length = 185
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 41 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 100
Query: 92 HRNLDAPTS-------EQPLPPCTNA-----------TPLSSAPPSS 120
R+ S EQP+ P A +P SS PP S
Sbjct: 101 TRSASLLKSYGQEAAIEQPVAPRPTALSPEYLSWPASSPYSSVPPYS 147
>gi|338724527|ref|XP_003364960.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 2 [Equus
caballus]
Length = 217
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|148707332|gb|EDL39279.1| paired related homeobox 1, isoform CRA_b [Mus musculus]
Length = 216
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 98 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 157
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 158 NKNASLLKSYSGDVTAVEQPIVP 180
>gi|70909356|ref|NP_783617.2| paired mesoderm homeobox protein 1 isoform b [Mus musculus]
gi|73960642|ref|XP_862211.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 3 [Canis
lupus familiaris]
gi|291397452|ref|XP_002715517.1| PREDICTED: paired mesoderm homeobox 1 isoform 2 [Oryctolagus
cuniculus]
gi|410985855|ref|XP_003999231.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Felis
catus]
gi|199584|gb|AAA39672.1| MHox [Mus musculus]
gi|460125|gb|AAC52139.1| homeobox protein [Mus musculus]
gi|51996938|gb|AAU21314.1| Prx-1 [Rattus norvegicus]
gi|62185742|gb|AAH92372.1| Paired related homeobox 1 [Mus musculus]
gi|149058221|gb|EDM09378.1| paired related homeobox 1, isoform CRA_b [Rattus norvegicus]
Length = 217
Score = 111 bits (278), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|354503916|ref|XP_003514026.1| PREDICTED: paired mesoderm homeobox protein 2-like [Cricetulus
griseus]
Length = 281
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 137 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 196
Query: 92 HRNLDAPTS-------EQPLPPCTNA-----------TPLSSAPPSS 120
R+ S EQP+ P A +P SS PP S
Sbjct: 197 TRSASLLKSYGQEAAIEQPVAPRPTALSPEYLSWPASSPYSSVPPYS 243
>gi|126306218|ref|XP_001364833.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 2
[Monodelphis domestica]
gi|395530771|ref|XP_003767461.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2
[Sarcophilus harrisii]
Length = 217
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|5902024|ref|NP_008833.1| paired mesoderm homeobox protein 1 isoform pmx-1a [Homo sapiens]
gi|332219537|ref|XP_003258911.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Nomascus
leucogenys]
gi|332811195|ref|XP_003308648.1| PREDICTED: paired mesoderm homeobox protein 1 [Pan troglodytes]
gi|395729421|ref|XP_003775548.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Pongo
abelii]
gi|397508501|ref|XP_003824691.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Pan
paniscus]
gi|402858178|ref|XP_003893599.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 1 [Papio
anubis]
gi|119611288|gb|EAW90882.1| paired related homeobox 1, isoform CRA_a [Homo sapiens]
gi|380785221|gb|AFE64486.1| paired mesoderm homeobox protein 1 isoform pmx-1a [Macaca mulatta]
gi|384947750|gb|AFI37480.1| paired mesoderm homeobox protein 1 isoform pmx-1b [Macaca mulatta]
Length = 217
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|351710115|gb|EHB13034.1| Paired mesoderm homeobox protein 1 [Heterocephalus glaber]
Length = 167
Score = 111 bits (278), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 21 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 80
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 81 NKNASLLKSYSGDVTAVEQPIVP 103
>gi|432097655|gb|ELK27767.1| Paired mesoderm homeobox protein 1 [Myotis davidii]
Length = 186
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 40 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 99
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 100 NKNASLLKSYSGDVTAVEQPIVP 122
>gi|426239653|ref|XP_004013734.1| PREDICTED: paired mesoderm homeobox protein 1 isoform 2 [Ovis
aries]
Length = 217
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>gi|432855373|ref|XP_004068189.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 1
[Oryzias latipes]
Length = 246
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 102 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 161
Query: 92 HRNL--------DAPTSEQPLPP 106
+N + EQP+ P
Sbjct: 162 SKNASLLKSYSGEVTAVEQPIVP 184
>gi|189947|gb|AAA60085.1| homeobox protein, partial [Homo sapiens]
Length = 199
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 81 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 140
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 141 NKNASLLKSYSGDVTAVEQPIVP 163
>gi|213417929|ref|NP_033142.2| paired mesoderm homeobox protein 2 [Mus musculus]
gi|223460240|gb|AAI37873.1| Paired related homeobox 2 [Mus musculus]
gi|223460633|gb|AAI37875.1| Paired related homeobox 2 [Mus musculus]
Length = 247
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 103 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 92 HRNLDAPTS-------EQPLPP 106
R+ S EQP+ P
Sbjct: 163 TRSASLLKSYGQEAAIEQPVAP 184
>gi|6174918|sp|Q06348.2|PRRX2_MOUSE RecName: Full=Paired mesoderm homeobox protein 2; Short=PRX-2;
AltName: Full=Homeobox protein S8
gi|2950237|emb|CAA37055.1| Prx2 [Mus musculus]
Length = 247
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 103 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 92 HRNLDAPTS-------EQPLPP 106
R+ S EQP+ P
Sbjct: 163 TRSASLLKSYGQEAAIEQPVAP 184
>gi|410979364|ref|XP_003996055.1| PREDICTED: paired mesoderm homeobox protein 2 [Felis catus]
Length = 204
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 73/107 (68%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 60 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 119
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
+R+ S EQP+ P T ++P S+ PP S
Sbjct: 120 NRSASLLKSYSQEAAIEQPVVPRPATLSPDYLSWTASSPYSTVPPYS 166
>gi|350583186|ref|XP_003355113.2| PREDICTED: paired mesoderm homeobox protein 1-like isoform 2 [Sus
scrofa]
Length = 253
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 107 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 166
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 167 NKNASLLKSYSGDVTAVEQPIVP 189
>gi|47550757|ref|NP_999899.1| paired related homeobox 1a [Danio rerio]
gi|31419293|gb|AAH53228.1| Paired related homeobox 1 [Danio rerio]
gi|182889442|gb|AAI65100.1| Prrx1 protein [Danio rerio]
Length = 245
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 101 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 160
Query: 92 HRNL--------DAPTSEQPLPP 106
+N + EQP+ P
Sbjct: 161 SKNASLLKSFSGEVTAVEQPIVP 183
>gi|344286708|ref|XP_003415099.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
1-like [Loxodonta africana]
Length = 271
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 125 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 184
Query: 92 HRNL--------DAPTSEQPLPP 106
++N + EQP+ P
Sbjct: 185 NKNASLLKSYSGEVTAVEQPIVP 207
>gi|157787036|ref|NP_001099209.1| paired mesoderm homeobox protein 2 [Rattus norvegicus]
gi|149039069|gb|EDL93289.1| paired related homeobox 2 (predicted) [Rattus norvegicus]
Length = 248
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 104 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 163
Query: 92 HRNLDAPTS-------EQPLPP 106
R+ S EQP+ P
Sbjct: 164 TRSASLLKSYGQEAAIEQPVAP 185
>gi|148676546|gb|EDL08493.1| paired related homeobox 2 [Mus musculus]
Length = 240
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 96 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 155
Query: 92 HRNLDAPTS-------EQPLPP 106
R+ S EQP+ P
Sbjct: 156 TRSASLLKSYGQEAAIEQPVAP 177
>gi|74139128|dbj|BAE38458.1| unnamed protein product [Mus musculus]
Length = 129
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 28 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 87
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 88 NKNASLLKSYSGDVTAVEQPIVP 110
>gi|12860398|dbj|BAB31942.1| unnamed protein product [Mus musculus]
Length = 175
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 18/107 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 31 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 90
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSS 120
R+ S EQP+ P ++P SS PP S
Sbjct: 91 TRSASLLKSYGQEAAIEQPVAPRPTTMSPDYLSWPASSPYSSVPPYS 137
>gi|432855375|ref|XP_004068190.1| PREDICTED: paired mesoderm homeobox protein 1-like isoform 2
[Oryzias latipes]
Length = 268
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/83 (63%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 102 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 161
Query: 92 HRNL--------DAPTSEQPLPP 106
+N + EQP+ P
Sbjct: 162 SKNASLLKSYSGEVTAVEQPIVP 184
>gi|312371612|gb|EFR19750.1| hypothetical protein AND_21856 [Anopheles darlingi]
Length = 234
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/61 (83%), Positives = 55/61 (90%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KPRR RT+F S Q+ ALEK+FERTHYPDAFVREELAK+ LSEARVQVWFQNRRAKFRRN
Sbjct: 48 KPRRTRTSFTSQQILALEKIFERTHYPDAFVREELAKENSLSEARVQVWFQNRRAKFRRN 107
Query: 86 E 86
E
Sbjct: 108 E 108
>gi|157418335|gb|ABV54786.1| Prx-1 [Ambystoma mexicanum]
Length = 114
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 8/94 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 18 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 77
Query: 92 HRNL--------DAPTSEQPLPPCTNATPLSSAP 117
++N D EQP+ P P ++P
Sbjct: 78 NKNASLLKSYSGDMTAVEQPIVPRPAPRPTDTSP 111
>gi|345325413|ref|XP_001514860.2| PREDICTED: paired mesoderm homeobox protein 1-like [Ornithorhynchus
anatinus]
Length = 260
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 79/123 (64%), Gaps = 18/123 (14%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 114 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 173
Query: 92 HRNL--------DAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQC---NSTCTF 140
++N + EQP+ P AP + + A P+S ++TC
Sbjct: 174 NKNASLLKSYSGEVTAVEQPIVP-------RPAPRPTDYLSWGTASPYSAMATYSATCAN 226
Query: 141 TSP 143
TSP
Sbjct: 227 TSP 229
>gi|12842605|dbj|BAB25663.1| unnamed protein product [Mus musculus]
gi|148707334|gb|EDL39281.1| paired related homeobox 1, isoform CRA_d [Mus musculus]
Length = 139
Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 73/111 (65%), Gaps = 13/111 (11%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 21 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 80
Query: 92 HRNL--------DAPTSEQPLPPC-----TNATPLSSAPPSSSHSFDFCAM 129
++N D EQP+ P T+ +A P S S C +
Sbjct: 81 NKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYRSSSLPRCCL 131
>gi|222851|dbj|BAA02695.1| paired-related homeotic gene product [Gallus gallus]
Length = 244
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 76/122 (62%), Gaps = 17/122 (13%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER S
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERMLAS 158
Query: 92 HR-------NLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQC---NSTCTFT 141
+ D EQP+ P AP + + A P+S ++TCT
Sbjct: 159 KNASLLKSYSGDVTAVEQPIVP-------RPAPRPTDYLSWGTASPYSAMATYSTTCTNA 211
Query: 142 SP 143
SP
Sbjct: 212 SP 213
>gi|324511371|gb|ADY44739.1| Aristaless-related homeobox protein [Ascaris suum]
Length = 487
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 4/82 (4%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
C G D E K K RR RTTF+++QL+ LEKVF RTHYPD F REELA++V L+EAR
Sbjct: 161 CSGSPD----ENGKRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEAR 216
Query: 71 VQVWFQNRRAKFRRNERNFISH 92
VQVWFQNRRAK+R+ ER H
Sbjct: 217 VQVWFQNRRAKWRKQERTSSVH 238
>gi|403276711|ref|XP_003930032.1| PREDICTED: dorsal root ganglia homeobox protein [Saimiri
boliviensis boliviensis]
Length = 268
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
Query: 5 WMLTLRCDG-------EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVR 57
W+++L G D+D + K RRNRTTF QL ALE VF +THYPD F R
Sbjct: 9 WLISLLLVGTAPFGNHSSGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTR 68
Query: 58 EELAKKVCLSEARVQVWFQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSA 116
EELA K+ L+EARVQVWFQNRRAK+R+ ER P +E PP N L+S
Sbjct: 69 EELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---LNSP 125
Query: 117 PPS 119
PP
Sbjct: 126 PPG 128
>gi|156545710|ref|XP_001604819.1| PREDICTED: retinal homeobox protein Rx3-like [Nasonia vitripennis]
Length = 248
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 56/66 (84%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTF++ QL ALE+VFERTHYPDAFVREELA +V LSEARVQVWFQNRRAKFRRNER+
Sbjct: 55 TTFSAQQLAALERVFERTHYPDAFVREELATRVSLSEARVQVWFQNRRAKFRRNERSSAL 114
Query: 92 HRNLDA 97
+R A
Sbjct: 115 NRGSSA 120
>gi|194766533|ref|XP_001965379.1| GF20646 [Drosophila ananassae]
gi|190617989|gb|EDV33513.1| GF20646 [Drosophila ananassae]
Length = 405
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 58/77 (75%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DGE D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 69 SDGEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 125
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 126 IQVWFQNRRAKWRKQEK 142
>gi|170587125|ref|XP_001898329.1| Homeobox domain containing protein [Brugia malayi]
gi|158594235|gb|EDP32820.1| Homeobox domain containing protein [Brugia malayi]
Length = 516
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF+++QL+ LEKVF RTHYPD F REELA++V L+EARVQVWFQNRRAK+R
Sbjct: 187 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRAKWR 246
Query: 84 RNERNFISH 92
+ ER H
Sbjct: 247 KQERTSAVH 255
>gi|357614287|gb|EHJ69003.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 258
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
DD D RRK RR RTTF S+QL+ LEK F RTHYPD F REELA K+ L+EAR+QVWF
Sbjct: 29 DDEDIPRRKQ--RRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWF 86
Query: 76 QNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLS 114
QNRRAK+R+ E+ QPLP T A P+S
Sbjct: 87 QNRRAKWRKQEKVGPHAHPYGGYLGGQPLP--TAAMPVS 123
>gi|312076583|ref|XP_003140926.1| hypothetical protein LOAG_05341 [Loa loa]
Length = 553
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF+++QL+ LEKVF RTHYPD F REELA++V L+EARVQVWFQNRRAK+R
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRAKWR 266
Query: 84 RNERNFISH 92
+ ER H
Sbjct: 267 KQERTSTVH 275
>gi|108735476|gb|ABG00197.1| Alx1 [Paracentrotus lividus]
Length = 519
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 3/99 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D +DDD + K K RRNRTTF S+QL +EKVF+RTHYPD + RE+LA + L+EAR
Sbjct: 184 GDPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEAR 243
Query: 71 VQVWFQNRRAKFRRNER--NFISHRNLDAPTS-EQPLPP 106
VQVWFQNRRAK+R+ ER F + R L + E P+ P
Sbjct: 244 VQVWFQNRRAKWRKRERFQQFQNMRGLGPGSGYEMPIAP 282
>gi|393909901|gb|EFO23144.2| hypothetical protein LOAG_05341 [Loa loa]
Length = 577
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF+++QL+ LEKVF RTHYPD F REELA++V L+EARVQVWFQNRRAK+R
Sbjct: 207 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRAKWR 266
Query: 84 RNERNFISH 92
+ ER H
Sbjct: 267 KQERTSTVH 275
>gi|30841697|gb|AAP34699.1| aristaless-like homeobox protein [Lytechinus variegatus]
Length = 429
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D +DDD + K K RRNRTTF S+QL +EKVF+RTHYPD + RE+LA + L+EARV
Sbjct: 102 DPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARV 161
Query: 72 QVWFQNRRAKFRRNER--NFISHRNLDAPTS-EQPLPP 106
QVWFQNRRAK+R+ ER F + R L + E P+ P
Sbjct: 162 QVWFQNRRAKWRKRERFQQFQNMRGLGPGSGYEMPIAP 199
>gi|344030242|ref|NP_001230663.1| retinal homeobox protein Rx [Taeniopygia guttata]
Length = 316
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 15/145 (10%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L
Sbjct: 101 LPAGSGGEGKPSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVNL 160
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNL-DAPT-------SEQPLPPCTNATPLSS--A 116
E RVQVWFQNRRAK+RR E+ ++ L D+P P+ P +++ PL + +
Sbjct: 161 PEVRVQVWFQNRRAKWRRQEKLEVTSMKLQDSPILSFNRSPQATPIGPLSSSLPLETWLS 220
Query: 117 PPSSSHSF-----DFCAMPHSQCNS 136
PP S + F A P S +S
Sbjct: 221 PPVPSSTALQTLPGFVASPQSLPSS 245
>gi|383861924|ref|XP_003706434.1| PREDICTED: retinal homeobox protein Rx-like [Megachile rotundata]
Length = 281
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 75/138 (54%), Gaps = 17/138 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DD + K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 77 GCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
Query: 73 VWFQNRRAKFRRNER-----------NFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSS 121
VWFQNRRAK+RR E+ + + RN+ P P P L SA P
Sbjct: 137 VWFQNRRAKWRRQEKMEAARLGLSEYHAANMRNVAGPALGLPGDPWLTPPGLLSALPG-- 194
Query: 122 HSFDFCAMPHSQCNSTCT 139
F A PH+ S T
Sbjct: 195 ----FLAAPHTGYPSYLT 208
>gi|410973607|ref|XP_003993239.1| PREDICTED: homeobox protein aristaless-like 4 [Felis catus]
Length = 408
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 200 DKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 259
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 260 QNRRAKWRKRER 271
>gi|47551253|ref|NP_999809.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
gi|30841695|gb|AAP34698.1| aristaless-like homeobox protein [Strongylocentrotus purpuratus]
Length = 430
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D +DDD + K K RRNRTTF S+QL +EKVF+RTHYPD + RE+LA + L+EARV
Sbjct: 103 DPKDDDKNDSDAKRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARV 162
Query: 72 QVWFQNRRAKFRRNER--NFISHRNLDAPTS-EQPLPP 106
QVWFQNRRAK+R+ ER F + R L + E P+ P
Sbjct: 163 QVWFQNRRAKWRKRERFQQFQNMRGLGPGSGYEMPIAP 200
>gi|291404049|ref|XP_002718385.1| PREDICTED: paired related homeobox protein-like 1-like [Oryctolagus
cuniculus]
Length = 269
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 28 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 87
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N +SS PP
Sbjct: 88 QNRRAKWRKTERGASDQEPGAKEPMAEVQPPPVRN---ISSPPPG 129
>gi|348560754|ref|XP_003466178.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cavia
porcellus]
Length = 263
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N +SS PP+
Sbjct: 82 QNRRAKWRKTERGTSDQEPGAKEPMAEVTPPPVRN---ISSPPPA 123
>gi|340728299|ref|XP_003402463.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
Length = 826
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F++ Q++ALEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 528 GTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQ 587
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 588 VWFSNRRAKWRREEK 602
>gi|270210217|gb|ACX30667.2| aristaless 2 [Junonia coenia]
Length = 212
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 12/102 (11%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
DD D RRK RR RTTF S+QL+ LEK F RTHYPD F REELA K+ L+EAR+QVWF
Sbjct: 3 DDEDIPRRKQ--RRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWF 60
Query: 76 QNRRAKFRRNER---------NFISHRNLDAPTSEQPLPPCT 108
QNRRAK+R+ E+ ++S PT P+PP T
Sbjct: 61 QNRRAKWRKQEKVGPHAHPYSGYLSGGQ-PLPTPSLPVPPHT 101
>gi|402594071|gb|EJW87998.1| hypothetical protein WUBG_01089, partial [Wuchereria bancrofti]
Length = 286
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF+++QL+ LEKVF RTHYPD F REELA++V L+EARVQVWFQNRRAK+R
Sbjct: 186 KRKQRRYRTTFSAYQLDELEKVFARTHYPDVFTREELAQRVILTEARVQVWFQNRRAKWR 245
Query: 84 RNERNFISH 92
+ ER H
Sbjct: 246 KQERTSAVH 254
>gi|45383792|ref|NP_989493.1| homeobox protein aristaless-like 4 [Gallus gallus]
gi|3661601|gb|AAC61772.1| paired type homeodomain protein [Gallus gallus]
Length = 387
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 181 DKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 240
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 241 QNRRAKWRKRER 252
>gi|18203021|sp|Q9I9D5.1|RX1_ASTFA RecName: Full=Retinal homeobox protein Rx1
gi|8099680|gb|AAF72201.1|AF264703_1 retinal homeobox protein [Astyanax mexicanus]
Length = 334
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 134 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 193
Query: 79 RAKFRRNERNFISHRNL-DAPTSEQPLPPC-TNATPLSSAPP 118
RAK+RR E+ S L D+P PP TN P+S++ P
Sbjct: 194 RAKWRRQEKMDASAVKLHDSPMLSFNRPPMHTNVGPMSNSLP 235
>gi|307192281|gb|EFN75568.1| Retinal homeobox protein Rx3 [Harpegnathos saltator]
Length = 282
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DD + K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 77 GCGDDINGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
Query: 73 VWFQNRRAKFRRNER------------NFISHRNLDAPTSEQPLPPCTNATPLSSAPPSS 120
VWFQNRRAK+RR E+ + + RN+ P P P L SA P
Sbjct: 137 VWFQNRRAKWRRQEKMEAARLGLSEYHHAANMRNVAGPALGLPGDPWLAPPGLLSALPG- 195
Query: 121 SHSFDFCAMPHSQCNSTCT 139
F A PH+ S T
Sbjct: 196 -----FLAAPHTGYPSYLT 209
>gi|296220129|ref|XP_002756185.1| PREDICTED: dorsal root ganglia homeobox protein [Callithrix
jacchus]
Length = 282
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 41 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 100
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 101 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 142
>gi|344274342|ref|XP_003408976.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Loxodonta africana]
Length = 268
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQESGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|297686443|ref|XP_002820758.1| PREDICTED: dorsal root ganglia homeobox protein [Pongo abelii]
Length = 268
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTSPPVRN---INSPPPG 128
>gi|440902039|gb|ELR52885.1| Dorsal root ganglia homeobox protein, partial [Bos grunniens mutus]
Length = 257
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 16 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 75
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N L+S PP
Sbjct: 76 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---LNSPPPG 117
>gi|195032675|ref|XP_001988540.1| GH11220 [Drosophila grimshawi]
gi|193904540|gb|EDW03407.1| GH11220 [Drosophila grimshawi]
Length = 376
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E DDY +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 57 SDCEVDDYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 113
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 114 IQVWFQNRRAKWRKQEK 130
>gi|327259725|ref|XP_003214686.1| PREDICTED: homeobox protein aristaless-like 4-like [Anolis
carolinensis]
Length = 337
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 131 DKTDSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 190
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 191 QNRRAKWRKRER 202
>gi|355562412|gb|EHH19006.1| hypothetical protein EGK_19626 [Macaca mulatta]
Length = 268
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|426364705|ref|XP_004049438.1| PREDICTED: dorsal root ganglia homeobox protein [Gorilla gorilla
gorilla]
Length = 268
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|351700009|gb|EHB02928.1| Dorsal root ganglia homeobox protein [Heterocephalus glaber]
Length = 443
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 66/105 (62%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 28 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 87
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP+
Sbjct: 88 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPT 129
>gi|301624284|ref|XP_002941436.1| PREDICTED: retinal homeobox protein Rx1-like [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 70/110 (63%), Gaps = 6/110 (5%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G + D E K K RRNRTTF ++QL+ LE+ FER+HYPD + REELA KV L E RVQ
Sbjct: 22 GTPEGEDNELPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMKVSLPEVRVQ 81
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAPT---SEQPLPPCTNATPLSSAPP 118
VWFQNRRAK+RR E+ S L D+P S P+ T PLS+ P
Sbjct: 82 VWFQNRRAKWRRQEKLETSSSKLHDSPLLSFSRSPM--ATGVGPLSNTLP 129
>gi|432112496|gb|ELK35234.1| Dorsal root ganglia homeobox protein [Myotis davidii]
Length = 180
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 64 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 123
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER +E PP NAT S PP
Sbjct: 124 QNRRAKWRKTERGASDQEPGAKESMAEVTSPPVRNAT---SPPPG 165
>gi|114635169|ref|XP_001138723.1| PREDICTED: dorsal root ganglia homeobox protein [Pan troglodytes]
Length = 268
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|350403203|ref|XP_003486730.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 796
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F++ Q++ALEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 492 GTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQ 551
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 552 VWFSNRRAKWRREEK 566
>gi|380023560|ref|XP_003695586.1| PREDICTED: retinal homeobox protein Rx-like [Apis florea]
Length = 282
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DD + K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 77 GCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
Query: 73 VWFQNRRAKFRRNERNFISH------------RNLDAPTSEQPLPPCTNATPLSSAPPSS 120
VWFQNRRAK+RR E+ + RN+ P P P L SA P
Sbjct: 137 VWFQNRRAKWRRQEKMEAARLGLSEYHHPGNMRNVAGPALGLPGDPWLTPPGLLSALPG- 195
Query: 121 SHSFDFCAMPHSQCNSTCT 139
F A PH+ S T
Sbjct: 196 -----FLAAPHTGYPSYLT 209
>gi|156387437|ref|XP_001634210.1| predicted protein [Nematostella vectensis]
gi|156221290|gb|EDO42147.1| predicted protein [Nematostella vectensis]
gi|295389204|gb|ADG03432.1| retinal homeobox [Nematostella vectensis]
Length = 266
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG+ D+ D + K K RRNRTTF + QL+ LE+ FE++HYPD + REELA K+ L E RV
Sbjct: 70 DGKSDEADGDSSKKKLRRNRTTFTTFQLHELERAFEKSHYPDVYTREELALKISLPEVRV 129
Query: 72 QVWFQNRRAKFRRNER-NFISHRNLDAPT 99
QVWFQN+RAK+RR E+ S ++L +P+
Sbjct: 130 QVWFQNKRAKWRREEKMEMASLQDLPSPS 158
>gi|332258274|ref|XP_003278225.1| PREDICTED: dorsal root ganglia homeobox protein [Nomascus
leucogenys]
Length = 268
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|358337749|dbj|GAA56083.1| homeobox protein aristaless-like 4 [Clonorchis sinensis]
Length = 529
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 60/81 (74%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D+ + +R K K RRNRTTF S QLN +E++F++THYPD + RE+LA + L+EARVQVW
Sbjct: 120 DEQQNCDRDKLKKRRNRTTFTSFQLNEMERIFQKTHYPDVYAREQLAMRTGLTEARVQVW 179
Query: 75 FQNRRAKFRRNERNFISHRNL 95
FQNRRAK+R+ ER H L
Sbjct: 180 FQNRRAKWRKRERFGTGHNGL 200
>gi|340709854|ref|XP_003393515.1| PREDICTED: retinal homeobox protein Rx-like [Bombus terrestris]
gi|350406119|ref|XP_003487661.1| PREDICTED: retinal homeobox protein Rx-like [Bombus impatiens]
Length = 282
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 75/139 (53%), Gaps = 18/139 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DD + K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 77 GCGDDLNGNGGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
Query: 73 VWFQNRRAKFRRNER------------NFISHRNLDAPTSEQPLPPCTNATPLSSAPPSS 120
VWFQNRRAK+RR E+ + + RN+ P P P L SA P
Sbjct: 137 VWFQNRRAKWRRQEKMEAARLGLSEYHHPANMRNVAGPALGLPGDPWLTPPGLLSALPG- 195
Query: 121 SHSFDFCAMPHSQCNSTCT 139
F A PH+ S T
Sbjct: 196 -----FLAAPHTGYPSYLT 209
>gi|328718058|ref|XP_003246373.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 1
[Acyrthosiphon pisum]
gi|328718060|ref|XP_003246374.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 2
[Acyrthosiphon pisum]
gi|328718062|ref|XP_003246375.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 3
[Acyrthosiphon pisum]
gi|328718064|ref|XP_003246376.1| PREDICTED: retinal homeobox protein Rx-B-like isoform 4
[Acyrthosiphon pisum]
Length = 218
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF + QL LE F++THYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 72 KRKQRRYRTTFTNFQLEELENSFQKTHYPDVFFREELAMRIDLTEARVQVWFQNRRAKWR 131
Query: 84 RNERNFIS-HRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQCNSTCTFTS 142
+ E+ +S H++ + P + PC P+ S +P + NS C++TS
Sbjct: 132 KQEKTLVSQHQSQNEPI----INPCLTDNPMFGNSSS--------LLPQTDWNSLCSYTS 179
>gi|426256164|ref|XP_004021711.1| PREDICTED: dorsal root ganglia homeobox protein [Ovis aries]
Length = 305
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N L+S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---LNSPPPG 123
>gi|302564109|ref|NP_001181527.1| dorsal root ganglia homeobox protein [Macaca mulatta]
gi|402880151|ref|XP_003903676.1| PREDICTED: dorsal root ganglia homeobox protein [Papio anubis]
gi|355782761|gb|EHH64682.1| hypothetical protein EGM_17968 [Macaca fascicularis]
Length = 268
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 27 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 86
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 87 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 128
>gi|17569327|ref|NP_509860.1| Protein ALR-1 [Caenorhabditis elegans]
gi|3878964|emb|CAA92001.1| Protein ALR-1 [Caenorhabditis elegans]
Length = 362
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG + D +RK RR RTTF++ QL+ LEKVF RTHYPD F REELA +V L+EAR
Sbjct: 103 SDGTNSPDDNGKRKQ--RRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEAR 160
Query: 71 VQVWFQNRRAKFRRNERNFISH 92
VQVWFQNRRAK+R+ ER+ H
Sbjct: 161 VQVWFQNRRAKYRKQERSSTHH 182
>gi|402592915|gb|EJW86842.1| hypothetical protein WUBG_02247 [Wuchereria bancrofti]
Length = 184
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
LT G DD R K K RRNRTTFN QLN LE F ++HYPD F REELA K+ L
Sbjct: 56 LTPHSGGAADD----RSKRKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELATKINL 111
Query: 67 SEARVQVWFQNRRAKFRRNERN--FISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSF 124
EARVQVWFQNRRAK+R+ ER+ ++H N T + TP +PPSS +
Sbjct: 112 PEARVQVWFQNRRAKWRKTERDDHKLNHCNGQHETVVSNVQLSEYLTPALVSPPSSLSTA 171
Query: 125 --DFCAM 129
FC++
Sbjct: 172 LSQFCSI 178
>gi|397475296|ref|XP_003809079.1| PREDICTED: dorsal root ganglia homeobox protein [Pan paniscus]
Length = 265
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 24 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 83
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 84 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 125
>gi|268578085|ref|XP_002644025.1| C. briggsae CBR-ALR-1 protein [Caenorhabditis briggsae]
Length = 360
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/93 (58%), Positives = 65/93 (69%), Gaps = 5/93 (5%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG + D +RK RR RTTF++ QL+ LEKVF RTHYPD F REELA +V L+EAR
Sbjct: 105 SDGTNSPDDNGKRKQ--RRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEAR 162
Query: 71 VQVWFQNRRAKFRRNERNFISH---RNLDAPTS 100
VQVWFQNRRAK+R+ ER+ H L+ PTS
Sbjct: 163 VQVWFQNRRAKYRKQERSSTHHPYQAPLNIPTS 195
>gi|410901415|ref|XP_003964191.1| PREDICTED: dorsal root ganglia homeobox protein-like [Takifugu
rubripes]
Length = 307
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 57/85 (67%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWFQ
Sbjct: 32 DFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 91
Query: 77 NRRAKFRRNERNFISHRNLDAPTSE 101
NRRAK+R+ ER P SE
Sbjct: 92 NRRAKWRKTERGSTDAEGGKEPMSE 116
>gi|297491619|ref|XP_002699015.1| PREDICTED: dorsal root ganglia homeobox protein [Bos taurus]
gi|296472028|tpg|DAA14143.1| TPA: paired related homeobox protein-like 1-like [Bos taurus]
Length = 263
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N L+S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---LNSPPPG 123
>gi|148692895|gb|EDL24842.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 295
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 65 DFDDGFLRRKQ--RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 122
Query: 75 FQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
FQNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 123 FQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 165
>gi|344030214|ref|NP_001230653.1| retinal homeobox protein Rx2 [Gallus gallus]
gi|23451258|gb|AAN32718.1|AF420600_1 homeobox transcription factor RAX1 [Gallus gallus]
Length = 317
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G+ D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 107 GGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 166
Query: 72 QVWFQNRRAKFRRNERNFISHRNL-DAPT 99
QVWFQNRRAK+RR E+ +S L D+P
Sbjct: 167 QVWFQNRRAKWRRQEKLEVSSMKLQDSPI 195
>gi|110749931|ref|XP_001119966.1| PREDICTED: retinal homeobox protein Rx [Apis mellifera]
Length = 282
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 74/139 (53%), Gaps = 18/139 (12%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DD + K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 77 GCGDDLNGNSGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQ 136
Query: 73 VWFQNRRAKFRRNERNFISH------------RNLDAPTSEQPLPPCTNATPLSSAPPSS 120
VWFQNRRAK+RR E+ + RN+ P P P L SA P
Sbjct: 137 VWFQNRRAKWRRQEKMEAARLGLSEYHHPGNMRNVAGPALGLPGDPWLTPPGLLSALPG- 195
Query: 121 SHSFDFCAMPHSQCNSTCT 139
F A PH+ S T
Sbjct: 196 -----FLAAPHTGYPSYLT 209
>gi|71892442|ref|NP_001025475.1| homeobox protein aristaless-like 4 [Bos taurus]
gi|109940203|sp|Q4LAL6.1|ALX4_BOVIN RecName: Full=Homeobox protein aristaless-like 4
gi|70561331|emb|CAJ14976.1| aristaless-like homeobox 4 [Bos taurus]
Length = 397
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 192 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 251
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 252 RAKWRKRER 260
>gi|338717161|ref|XP_001500343.3| PREDICTED: dorsal root ganglia homeobox protein-like [Equus
caballus]
Length = 265
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 24 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 83
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 84 QNRRAKWRKTERGASEQEPGAKEPMAEVTPPPVRN---INSPPPG 125
>gi|308494817|ref|XP_003109597.1| CRE-ALR-1 protein [Caenorhabditis remanei]
gi|308245787|gb|EFO89739.1| CRE-ALR-1 protein [Caenorhabditis remanei]
Length = 362
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 9/96 (9%)
Query: 4 DWMLTLRC-------DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
D TL C DG + D +RK RR RTTF++ QL+ LEKVF RTHYPD F
Sbjct: 89 DGSSTLDCRENGSPSDGTNSPDDNGKRKQ--RRYRTTFSAFQLDELEKVFGRTHYPDVFT 146
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNERNFISH 92
REELA +V L+EARVQVWFQNRRAK+R+ ER+ H
Sbjct: 147 REELATRVQLTEARVQVWFQNRRAKYRKQERSSTHH 182
>gi|149034141|gb|EDL88911.1| paired related homeobox protein-like 1, isoform CRA_a [Rattus
norvegicus]
Length = 253
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 23 DFDDGFLRRKQ--RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 80
Query: 75 FQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
FQNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 81 FQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|440897881|gb|ELR49486.1| Homeobox protein aristaless-like 4, partial [Bos grunniens mutus]
Length = 385
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 180 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 239
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 240 RAKWRKRER 248
>gi|345792953|ref|XP_848719.2| PREDICTED: dorsal root ganglia homeobox protein [Canis lupus
familiaris]
Length = 287
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 46 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 105
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 106 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 147
>gi|343469157|gb|AEM43807.1| retina and anterior neural fold homeobox 2b [Xenopus laevis]
Length = 228
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G + DY+ K RRNRTTF ++QL+ LE FER+HYPD + REELA KV L E RVQ
Sbjct: 23 GTPEGEDYKLPTKKHRRNRTTFTTYQLHELEHAFERSHYPDVYSREELAMKVSLPEVRVQ 82
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAPT---SEQPLPPCTNATPLSSAPP 118
VWFQNRRAK+RR E+ S L D+P S P+ T+ PLS+A P
Sbjct: 83 VWFQNRRAKWRRQEKLESSTSKLHDSPLFSFSRSPI--ATSMGPLSTALP 130
>gi|341903512|gb|EGT59447.1| hypothetical protein CAEBREN_29597 [Caenorhabditis brenneri]
Length = 365
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 56/72 (77%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RR RTTF++ QL+ LEKVF RTHYPD F REELA +V L+EARVQVWFQNRRA
Sbjct: 111 ENGKRKQRRYRTTFSAFQLDELEKVFARTHYPDVFTREELATRVQLTEARVQVWFQNRRA 170
Query: 81 KFRRNERNFISH 92
K+R+ ER+ H
Sbjct: 171 KYRKQERSSTHH 182
>gi|395501652|ref|XP_003755205.1| PREDICTED: dorsal root ganglia homeobox protein [Sarcophilus
harrisii]
Length = 260
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 61/97 (62%), Gaps = 8/97 (8%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATP 112
QNRRAK+R+ ER A E P P T TP
Sbjct: 82 QNRRAKWRKTERG--------ASDQEGPKEPMTEVTP 110
>gi|13774326|gb|AAK38835.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>gi|18203379|sp|Q9PVX0.1|RX2_CHICK RecName: Full=Retinal homeobox protein Rx2; Short=cRax2
gi|6002395|dbj|BAA84749.1| homeobox protein cRax/Rax2/Rx2 [Gallus gallus]
Length = 317
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G+ D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 107 GGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 166
Query: 72 QVWFQNRRAKFRRNERNFISHRNL-DAPT 99
QVWFQNRRAK+RR E+ +S L D+P
Sbjct: 167 QVWFQNRRAKWRRQEKLEVSSMKLQDSPI 195
>gi|11125350|emb|CAC15060.1| homeodomain transcription factor ALX4 [Homo sapiens]
Length = 411
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>gi|383862169|ref|XP_003706556.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 552
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G DDD R K K +RNRT+F++ Q++ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 255 GGTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARI 314
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 315 QVWFSNRRAKWRREEK 330
>gi|403254633|ref|XP_003920066.1| PREDICTED: homeobox protein aristaless-like 4 [Saimiri boliviensis
boliviensis]
Length = 394
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 189 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 248
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 249 RAKWRKRER 257
>gi|73982544|ref|XP_850737.1| PREDICTED: ALX homeobox 4 isoform 1 [Canis lupus familiaris]
Length = 414
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 209 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 268
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 269 RAKWRKRER 277
>gi|281346213|gb|EFB21797.1| hypothetical protein PANDA_016919 [Ailuropoda melanoleuca]
Length = 252
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 11 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 70
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 71 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 112
>gi|126332676|ref|XP_001368029.1| PREDICTED: homeobox protein aristaless-like 4-like [Monodelphis
domestica]
Length = 417
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 213 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 272
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 273 RAKWRKRER 281
>gi|311271509|ref|XP_003133155.1| PREDICTED: LOW QUALITY PROTEIN: dorsal root ganglia homeobox
protein-like [Sus scrofa]
Length = 263
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASEQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|258504811|gb|ACV73011.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 9/96 (9%)
Query: 4 DWMLTLRC-------DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
D TL C DG + D +RK RR RTTF++ QL+ LEKVF RTHYPD F
Sbjct: 80 DGSSTLDCRENGSPSDGTNSPDDNGKRKQ--RRYRTTFSAFQLDELEKVFGRTHYPDVFT 137
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNERNFISH 92
REELA +V L+EARVQVWFQNRRAK+R+ ER+ H
Sbjct: 138 REELATRVQLTEARVQVWFQNRRAKYRKQERSSTHH 173
>gi|258504795|gb|ACV73003.1| ALR-1 [Caenorhabditis remanei]
gi|258504797|gb|ACV73004.1| ALR-1 [Caenorhabditis remanei]
gi|258504799|gb|ACV73005.1| ALR-1 [Caenorhabditis remanei]
gi|258504801|gb|ACV73006.1| ALR-1 [Caenorhabditis remanei]
gi|258504803|gb|ACV73007.1| ALR-1 [Caenorhabditis remanei]
gi|258504805|gb|ACV73008.1| ALR-1 [Caenorhabditis remanei]
gi|258504807|gb|ACV73009.1| ALR-1 [Caenorhabditis remanei]
gi|258504809|gb|ACV73010.1| ALR-1 [Caenorhabditis remanei]
gi|258504813|gb|ACV73012.1| ALR-1 [Caenorhabditis remanei]
gi|258504815|gb|ACV73013.1| ALR-1 [Caenorhabditis remanei]
gi|258504817|gb|ACV73014.1| ALR-1 [Caenorhabditis remanei]
gi|258504819|gb|ACV73015.1| ALR-1 [Caenorhabditis remanei]
gi|258504821|gb|ACV73016.1| ALR-1 [Caenorhabditis remanei]
gi|258504823|gb|ACV73017.1| ALR-1 [Caenorhabditis remanei]
gi|258504825|gb|ACV73018.1| ALR-1 [Caenorhabditis remanei]
Length = 316
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 9/96 (9%)
Query: 4 DWMLTLRC-------DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
D TL C DG + D +RK RR RTTF++ QL+ LEKVF RTHYPD F
Sbjct: 80 DGSSTLDCRENGSPSDGTNSPDDNGKRKQ--RRYRTTFSAFQLDELEKVFGRTHYPDVFT 137
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNERNFISH 92
REELA +V L+EARVQVWFQNRRAK+R+ ER+ H
Sbjct: 138 REELATRVQLTEARVQVWFQNRRAKYRKQERSSTHH 173
>gi|119588472|gb|EAW68066.1| aristaless-like homeobox 4 [Homo sapiens]
Length = 411
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>gi|424034|pir||A46403 transcription factor with prd-type homeo domain and Pro/ Gln-rich
domain al - fruit fly (Drosophila melanogaster)
Length = 384
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>gi|55743092|ref|NP_068745.2| homeobox protein aristaless-like 4 [Homo sapiens]
gi|254763249|sp|Q9H161.2|ALX4_HUMAN RecName: Full=Homeobox protein aristaless-like 4
gi|11125719|emb|CAC15120.1| homeodomain transcription factor ALX4 [Homo sapiens]
gi|168278961|dbj|BAG11360.1| aristaless-like homeobox 4 [synthetic construct]
gi|187252473|gb|AAI66622.1| ALX homeobox 4 [synthetic construct]
Length = 411
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>gi|426368049|ref|XP_004051027.1| PREDICTED: homeobox protein aristaless-like 4 [Gorilla gorilla
gorilla]
Length = 409
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 204 DSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 264 RAKWRKRER 272
>gi|14017793|dbj|BAB47417.1| KIAA1788 protein [Homo sapiens]
Length = 413
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 208 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 267
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 268 RAKWRKRER 276
>gi|219518636|gb|AAI71926.1| Prrxl1 protein [Mus musculus]
Length = 180
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|317373355|sp|Q8BYH0.2|DRGX_MOUSE RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|188036459|gb|ACD45984.1| paired related homeobox protein-like 1 [Mus musculus]
Length = 263
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|449784876|ref|NP_001263380.1| dorsal root ganglia homeobox protein [Homo sapiens]
gi|158513808|sp|A6NNA5.1|DRGX_HUMAN RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Paired-related homeobox protein-like 1
gi|119613506|gb|EAW93100.1| hCG32744 [Homo sapiens]
gi|261861218|dbj|BAI47131.1| dorsal root ganglia homeobox [synthetic construct]
Length = 263
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|344281094|ref|XP_003412315.1| PREDICTED: homeobox protein aristaless-like 4-like [Loxodonta
africana]
Length = 406
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 201 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 260
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 261 RAKWRKRER 269
>gi|167234447|ref|NP_001107838.1| aristaless [Tribolium castaneum]
Length = 309
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 56/77 (72%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG D + D K K RR RTTF S+QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 78 SDGSDPEPDEFAPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 137
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 138 IQVWFQNRRAKWRKQEK 154
>gi|395858717|ref|XP_003801706.1| PREDICTED: dorsal root ganglia homeobox protein [Otolemur
garnettii]
Length = 263
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPIAEVTPPPVRN---INSPPPG 123
>gi|301787271|ref|XP_002929051.1| PREDICTED: homeobox protein aristaless-like 4-like [Ailuropoda
melanoleuca]
Length = 353
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 148 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 207
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 208 RAKWRKRER 216
>gi|432852270|ref|XP_004067164.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 32/142 (22%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRA
Sbjct: 171 ESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRA 230
Query: 81 KFRRNER------------------------NFISHRN---LDAPTSEQPLP----PCTN 109
K+R+ ER N+ +N L ++ P+P PC
Sbjct: 231 KWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWLSGSSAASPVPGCVVPCDT 290
Query: 110 ATP-LSSAPPSSSHSFDFCAMP 130
TP ++ P S+S DF +P
Sbjct: 291 ITPCMTPHPHSASGVSDFLGVP 312
>gi|149034142|gb|EDL88912.1| paired related homeobox protein-like 1, isoform CRA_b [Rattus
norvegicus]
Length = 263
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|402893728|ref|XP_003910041.1| PREDICTED: homeobox protein aristaless-like 4 [Papio anubis]
Length = 409
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 204 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 264 RAKWRKRER 272
>gi|355566588|gb|EHH22967.1| Homeobox protein aristaless-like 4 [Macaca mulatta]
Length = 409
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 204 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 264 RAKWRKRER 272
>gi|109106654|ref|XP_001113643.1| PREDICTED: homeobox protein aristaless-like 4-like [Macaca mulatta]
Length = 409
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 204 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 264 RAKWRKRER 272
>gi|328779009|ref|XP_001120031.2| PREDICTED: hypothetical protein LOC724238 [Apis mellifera]
Length = 897
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F++ Q++ALEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 592 GTDDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQ 651
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 652 VWFSNRRAKWRREEK 666
>gi|354465789|ref|XP_003495359.1| PREDICTED: dorsal root ganglia homeobox protein-like [Cricetulus
griseus]
Length = 263
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|195433002|ref|XP_002064504.1| GK23788 [Drosophila willistoni]
gi|194160589|gb|EDW75490.1| GK23788 [Drosophila willistoni]
Length = 375
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 56 SDCETDEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 112
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 113 IQVWFQNRRAKWRKQEK 129
>gi|6671541|ref|NP_031468.1| homeobox protein aristaless-like 4 [Mus musculus]
gi|13626102|sp|O35137.1|ALX4_MOUSE RecName: Full=Homeobox protein aristaless-like 4; AltName:
Full=ALX-4
gi|2352266|gb|AAC39943.1| paired-type homeodomain transcription factor [Mus musculus]
gi|148695681|gb|EDL27628.1| aristaless 4 [Mus musculus]
Length = 399
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 194 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 253
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 254 RAKWRKRER 262
>gi|270006446|gb|EFA02894.1| eyeless [Tribolium castaneum]
Length = 453
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 222 GPDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQ 281
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP 105
VWF NRRAK+RR E+ R AP +E P P
Sbjct: 282 VWFSNRRAKWRREEKLRNQRRGAPAP-AEHPGP 313
>gi|160333791|ref|NP_001103907.1| eyeless [Tribolium castaneum]
gi|158187657|gb|ABW23132.1| eyeless [Tribolium castaneum]
Length = 453
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 222 GPDDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQ 281
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP 105
VWF NRRAK+RR E+ R AP +E P P
Sbjct: 282 VWFSNRRAKWRREEKLRNQRRGAPAP-AEHPGP 313
>gi|157818677|ref|NP_001100023.1| homeobox protein aristaless-like 4 [Rattus norvegicus]
gi|149022700|gb|EDL79594.1| aristaless 4 (predicted) [Rattus norvegicus]
Length = 399
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 194 DSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 253
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 254 RAKWRKRER 262
>gi|325516451|gb|ADZ24784.1| Pax6 [Terebratalia transversa]
Length = 433
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+GE D+ R K K +RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 212 NGESDEQMRMRLKRKLQRNRTSFTNSQIEALEKEFERTHYPDVFARERLAQKIDLPEARI 271
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL---------PPCTNATPLSSAPPSSSH 122
QVWF NRRAK+RR E+ R TS P+ P AT S P SS
Sbjct: 272 QVWFSNRRAKWRREEKLRNQRREAANGTSRIPINSSFPNTWHPAIHGATLSESQTPYSSL 331
Query: 123 SFDFCAMPHSQCNSTCTFTS 142
++ ++ NS C TS
Sbjct: 332 PMPSYSLANNMPNSACLQTS 351
>gi|291384886|ref|XP_002709113.1| PREDICTED: aristaless-like homeobox 4-like [Oryctolagus cuniculus]
Length = 397
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 192 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 251
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 252 RAKWRKRER 260
>gi|49169835|ref|NP_001001796.1| dorsal root ganglia homeobox protein [Mus musculus]
gi|26333375|dbj|BAC30405.1| unnamed protein product [Mus musculus]
gi|124376814|gb|AAI32614.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|148877678|gb|AAI45918.1| Paired related homeobox protein-like 1 [Mus musculus]
gi|188036461|gb|ACD45985.1| paired related homeobox protein-like 1b [Mus musculus]
Length = 220
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|340730425|gb|AEK64853.1| aristaless-like homeobox 4 protein [Xenopus (Silurana) tropicalis]
Length = 321
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 115 DKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 174
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 175 QNRRAKWRKRER 186
>gi|395815567|ref|XP_003781297.1| PREDICTED: homeobox protein aristaless-like 4 [Otolemur garnettii]
Length = 407
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 204 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 263
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 264 RAKWRKRER 272
>gi|354491350|ref|XP_003507818.1| PREDICTED: homeobox protein aristaless-like 4-like [Cricetulus
griseus]
Length = 319
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 114 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 173
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 174 RAKWRKRER 182
>gi|124111346|gb|ABM92080.1| ALX4 [Pan troglodytes]
Length = 255
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 50 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 109
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 110 RAKWRKRER 118
>gi|395742860|ref|XP_002821892.2| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pongo abelii]
Length = 407
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 203 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 262
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 263 RAKWRKRER 271
>gi|195118282|ref|XP_002003669.1| GI21624 [Drosophila mojavensis]
gi|193914244|gb|EDW13111.1| GI21624 [Drosophila mojavensis]
Length = 397
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 59 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 115
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 116 IQVWFQNRRAKWRKQEK 132
>gi|301783499|ref|XP_002927160.1| PREDICTED: dorsal root ganglia homeobox protein-like [Ailuropoda
melanoleuca]
Length = 263
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|10863749|gb|AAG23961.1|AF294629_1 aristaless-like 4 [Homo sapiens]
Length = 410
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>gi|194217845|ref|XP_001915219.1| PREDICTED: hypothetical protein LOC100055958 [Equus caballus]
Length = 608
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
+ D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 400 EKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 459
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 460 QNRRAKWRKRER 471
>gi|410975579|ref|XP_003994208.1| PREDICTED: dorsal root ganglia homeobox protein [Felis catus]
Length = 263
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|407025361|gb|AFS65547.1| Alx1, partial [Parastichopus parvimensis]
Length = 311
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG++ D +RK RRNRTTF S QL +EKVF+RTHYPD ++RE+LA + L+EARV
Sbjct: 97 DGKNSGGDDSKRKK--RRNRTTFTSFQLEEMEKVFQRTHYPDVYMREQLALRCDLTEARV 154
Query: 72 QVWFQNRRAKFRRNER--NFISHRNLDAPTS--EQPLPP 106
QVWFQNRRAK+R+ ER + R L P S E P+ P
Sbjct: 155 QVWFQNRRAKWRKRERFQQMQTMRGLAPPGSGYEMPMAP 193
>gi|41282110|ref|NP_571300.2| retinal homeobox protein Rx1 [Danio rerio]
gi|38173897|gb|AAH60890.1| Retinal homeobox gene 1 [Danio rerio]
Length = 330
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 22/136 (16%)
Query: 6 MLTLRCDGEDDDY--------------DYERRKPKPRRNRTTFNSHQLNALEKVFERTHY 51
M + +CDG+ D D E+ K K RRNRTTF ++QL+ LE+ FE++HY
Sbjct: 102 MFSNKCDGDLGDLRKAIESDSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHY 161
Query: 52 PDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFISHRNL--------DAPTSEQP 103
PD + REELA KV L E RVQVWFQNRRAK+RR E+ S L + P+
Sbjct: 162 PDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPT 221
Query: 104 LPPCTNATPLSSAPPS 119
+ P N+ PL PS
Sbjct: 222 VGPMNNSLPLDPWLPS 237
>gi|344257015|gb|EGW13119.1| Homeobox protein aristaless-like 4 [Cricetulus griseus]
Length = 237
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 32 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 91
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 92 RAKWRKRER 100
>gi|332836398|ref|XP_521895.3| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Pan troglodytes]
Length = 410
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 205 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 264
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 265 RAKWRKRER 273
>gi|17380298|sp|O42356.2|RX1_DANRE RecName: Full=Retinal homeobox protein Rx1
gi|9903605|gb|AAB62325.2| retinal homeobox protein [Danio rerio]
Length = 330
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 22/136 (16%)
Query: 6 MLTLRCDGEDDDY--------------DYERRKPKPRRNRTTFNSHQLNALEKVFERTHY 51
M + +CDG+ D D E+ K K RRNRTTF ++QL+ LE+ FE++HY
Sbjct: 102 MFSNKCDGDLGDLRKAIESDSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHY 161
Query: 52 PDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFISHRNL--------DAPTSEQP 103
PD + REELA KV L E RVQVWFQNRRAK+RR E+ S L + P+
Sbjct: 162 PDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPT 221
Query: 104 LPPCTNATPLSSAPPS 119
+ P N+ PL PS
Sbjct: 222 VGPMNNSLPLDPWLPS 237
>gi|21955176|ref|NP_665710.1| dorsal root ganglia homeobox protein [Rattus norvegicus]
gi|6015028|sp|Q62798.1|DRGX_RAT RecName: Full=Dorsal root ganglia homeobox protein; AltName:
Full=Dorsal root ganglion 11; AltName: Full=Homeobox
protein DRG11; AltName: Full=Paired-related homeobox
protein-like 1
gi|1144015|gb|AAA87203.1| paired-like homeodomain transcription factor [Rattus norvegicus]
Length = 263
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 23 DFDDGFLRRKQ--RRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 80
Query: 75 FQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
FQNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 81 FQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>gi|281485130|gb|ADA70355.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 259
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
DD D RRK RR RTTF S+QL+ LEK F RTHYPD F REELA K+ L+EAR+QVWF
Sbjct: 29 DDEDIPRRKQ--RRYRTTFTSYQLDELEKAFGRTHYPDVFTREELALKIGLTEARIQVWF 86
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ E+
Sbjct: 87 QNRRAKWRKQEK 98
>gi|125820954|ref|XP_001340966.1| PREDICTED: aristaless-like homeobox 4a [Danio rerio]
Length = 368
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 164 DKTEGESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 223
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 224 QNRRAKWRKRER 235
>gi|195347243|ref|XP_002040163.1| GM15498 [Drosophila sechellia]
gi|194135512|gb|EDW57028.1| GM15498 [Drosophila sechellia]
Length = 220
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 169 KQERHAI 175
>gi|395543713|ref|XP_003773758.1| PREDICTED: homeobox protein aristaless-like 4 [Sarcophilus
harrisii]
Length = 154
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 54 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 113
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 114 RAKWRKRER 122
>gi|85719151|dbj|BAE78538.1| aristaless [Harmonia axyridis]
Length = 314
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 57/78 (73%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
+ DG + + D K K RR RTTF S+QL LEK F RTHYPD F REELA K+ L+EA
Sbjct: 79 QSDGSEAETDEFAPKRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEA 138
Query: 70 RVQVWFQNRRAKFRRNER 87
R+QVWFQNRRAK+R+ E+
Sbjct: 139 RIQVWFQNRRAKWRKQEK 156
>gi|195470248|ref|XP_002087420.1| GE16769 [Drosophila yakuba]
gi|194173521|gb|EDW87132.1| GE16769 [Drosophila yakuba]
Length = 410
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>gi|195388310|ref|XP_002052823.1| GJ17771 [Drosophila virilis]
gi|194149280|gb|EDW64978.1| GJ17771 [Drosophila virilis]
Length = 381
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 59 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 115
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 116 IQVWFQNRRAKWRKQEK 132
>gi|348558708|ref|XP_003465158.1| PREDICTED: homeobox protein aristaless-like 4-like [Cavia
porcellus]
Length = 407
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 202 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 261
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 262 RAKWRKRER 270
>gi|348509621|ref|XP_003442346.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 373
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 32/142 (22%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRA
Sbjct: 173 ESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRA 232
Query: 81 KFRRNER------------------------NFISHRN---LDAPTSEQPLP----PCTN 109
K+R+ ER N+ +N + ++ P+P PC
Sbjct: 233 KWRKRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGGSSAASPVPGCVVPCDT 292
Query: 110 ATP-LSSAPPSSSHSFDFCAMP 130
P ++ P S+S DF +P
Sbjct: 293 VAPCMTPHPHSASGVSDFLGVP 314
>gi|195350083|ref|XP_002041571.1| GM16736 [Drosophila sechellia]
gi|195575531|ref|XP_002077631.1| GD23020 [Drosophila simulans]
gi|194123344|gb|EDW45387.1| GM16736 [Drosophila sechellia]
gi|194189640|gb|EDX03216.1| GD23020 [Drosophila simulans]
Length = 410
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>gi|290262|gb|AAA28840.1| prd-like homeobox protein [Drosophila melanogaster]
Length = 408
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>gi|397473637|ref|XP_003808312.1| PREDICTED: homeobox protein aristaless-like 4 [Pan paniscus]
Length = 424
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
+ D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 216 EKADSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 275
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 276 QNRRAKWRKRER 287
>gi|17986113|ref|NP_523834.1| putative homeodomain protein [Drosophila melanogaster]
gi|7291665|gb|AAF47087.1| putative homeodomain protein [Drosophila melanogaster]
gi|113204973|gb|ABI34220.1| RT01102p [Drosophila melanogaster]
Length = 220
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 169 KQERHAI 175
>gi|390470456|ref|XP_003734292.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 4
[Callithrix jacchus]
Length = 415
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 210 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 269
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 270 RAKWRKRER 278
>gi|351696938|gb|EHA99856.1| Homeobox protein aristaless-like 4, partial [Heterocephalus glaber]
Length = 300
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 94 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 153
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 154 RAKWRKRER 162
>gi|348523547|ref|XP_003449285.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 715
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/144 (43%), Positives = 79/144 (54%), Gaps = 20/144 (13%)
Query: 7 LTLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
+++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 488 VSVSTNGEDSEETQMRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLANKI 547
Query: 65 CLSEARVQVWFQNRRAKFR-----RNERNFISHRNLDAPTSE-------QPLPPCTNATP 112
L EAR+QVWF NRRAK+R RN+R +S + P S QPLP T
Sbjct: 548 DLPEARIQVWFSNRRAKWRREEKLRNQRRQVSSSSNHIPISSSFNTSVYQPLPQPTTPVS 607
Query: 113 LSSAP------PSSSHSFDFCAMP 130
SS P S+S+ AMP
Sbjct: 608 FSSGSMLGRSDPVLSNSYSLPAMP 631
>gi|24580629|ref|NP_722629.1| aristaless [Drosophila melanogaster]
gi|60416352|sp|Q06453.2|AL_DROME RecName: Full=Homeobox protein aristaless
gi|7296213|gb|AAF51505.1| aristaless [Drosophila melanogaster]
gi|21464440|gb|AAM52023.1| RE68460p [Drosophila melanogaster]
gi|220942482|gb|ACL83784.1| al-PA [synthetic construct]
gi|220952686|gb|ACL88886.1| al-PA [synthetic construct]
Length = 408
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>gi|195586201|ref|XP_002082866.1| GD25001 [Drosophila simulans]
gi|194194875|gb|EDX08451.1| GD25001 [Drosophila simulans]
Length = 220
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 169 KQERHAI 175
>gi|328706201|ref|XP_003243021.1| PREDICTED: hypothetical protein LOC100571445 [Acyrthosiphon pisum]
Length = 636
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Query: 11 CDGEDDDYDY-----ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
D EDD Y K K RR RTTF S+QL+ LEK F RTHYPD F REELA K+
Sbjct: 213 ADNEDDCYGGPPSAGGTNKRKQRRYRTTFTSYQLDELEKAFGRTHYPDVFTREELASKIG 272
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L+EAR+QVWFQNRRAK+R+ E+
Sbjct: 273 LTEARIQVWFQNRRAKWRKQEK 294
>gi|194754287|ref|XP_001959427.1| GF12058 [Drosophila ananassae]
gi|190620725|gb|EDV36249.1| GF12058 [Drosophila ananassae]
Length = 217
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 108 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 167
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 168 KQERHAI 174
>gi|281344761|gb|EFB20345.1| hypothetical protein PANDA_019137 [Ailuropoda melanoleuca]
Length = 422
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 217 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 276
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 277 RAKWRKRER 285
>gi|148233818|ref|NP_001082826.1| aristaless-like homeobox 4 [Danio rerio]
gi|134025313|gb|AAI35030.1| Zgc:162606 protein [Danio rerio]
Length = 364
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 160 DKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 219
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 220 QNRRAKWRKRER 231
>gi|157278545|ref|NP_001098373.1| retinal homeobox protein Rx2 [Oryzias latipes]
gi|17380303|sp|Q9I9A2.1|RX2_ORYLA RecName: Full=Retinal homeobox protein Rx2
gi|7635917|emb|CAB88703.1| Rx2 transcription factor [Oryzias latipes]
Length = 327
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 16/114 (14%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 131 EHGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRA 190
Query: 81 KFRRNERNFISHRNL-DAPT---SEQPLPPCTN------------ATPLSSAPP 118
K+RR E+ S L D+P + P+PP +P+SSA P
Sbjct: 191 KWRRQEKMDTSTMKLHDSPMLSFNRPPMPPSVGQVANPMPLDPWLTSPISSATP 244
>gi|195489357|ref|XP_002092703.1| GE11517 [Drosophila yakuba]
gi|194178804|gb|EDW92415.1| GE11517 [Drosophila yakuba]
Length = 219
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 108 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 167
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 168 KQERHAI 174
>gi|194885740|ref|XP_001976486.1| GG19984 [Drosophila erecta]
gi|190659673|gb|EDV56886.1| GG19984 [Drosophila erecta]
Length = 219
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 108 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 167
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 168 KQERHAI 174
>gi|113204913|gb|ABI34190.1| RT01002p [Drosophila melanogaster]
Length = 220
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 109 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 168
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 169 KQERHAI 175
>gi|195147252|ref|XP_002014594.1| GL18872 [Drosophila persimilis]
gi|194106547|gb|EDW28590.1| GL18872 [Drosophila persimilis]
Length = 397
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 70 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 126
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 127 IQVWFQNRRAKWRKQEK 143
>gi|125985361|ref|XP_001356444.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
gi|54644768|gb|EAL33508.1| GA17785 [Drosophila pseudoobscura pseudoobscura]
Length = 395
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 70 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 126
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 127 IQVWFQNRRAKWRKQEK 143
>gi|410908185|ref|XP_003967571.1| PREDICTED: homeobox protein aristaless-like 4-like [Takifugu
rubripes]
Length = 365
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 160 DKTEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 219
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 220 QNRRAKWRKRER 231
>gi|195134022|ref|XP_002011437.1| GI14042 [Drosophila mojavensis]
gi|193912060|gb|EDW10927.1| GI14042 [Drosophila mojavensis]
Length = 569
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/112 (47%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 253 GDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 312
Query: 73 VWFQNRRAKFRRNERNFISHRNLD---APTSEQPLPPCTNATPLSSAPPSSS 121
VWF NRRAK+RR E+ R++D N T SSAPP+ +
Sbjct: 313 VWFSNRRAKWRREEKLRTQRRSVDNVGGGAVNSSRASSNNLTTGSSAPPNGA 364
>gi|402903228|ref|XP_003914478.1| PREDICTED: retinal homeobox protein Rx [Papio anubis]
Length = 386
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 159 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 218
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 219 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 247
>gi|126272861|ref|XP_001366013.1| PREDICTED: dorsal root ganglia homeobox protein-like [Monodelphis
domestica]
Length = 260
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTN 109
QNRRAK+R+ ER P +E PP N
Sbjct: 82 QNRRAKWRKTERGASDQEGSKEPMNEV-TPPVRN 114
>gi|125807005|ref|XP_001360225.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|195149359|ref|XP_002015625.1| GL10922 [Drosophila persimilis]
gi|54635396|gb|EAL24799.1| GA10822 [Drosophila pseudoobscura pseudoobscura]
gi|194109472|gb|EDW31515.1| GL10922 [Drosophila persimilis]
Length = 216
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 107 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 166
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 167 KQERHAI 173
>gi|449279931|gb|EMC87364.1| Dorsal root ganglia homeobox protein [Columba livia]
Length = 261
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTN 109
QNRRAK+R+ ER S + T + PP N
Sbjct: 82 QNRRAKWRKTERG-TSDQEGSKETMAEVAPPARN 114
>gi|47224480|emb|CAG08730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 44 DKTEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 103
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 104 QNRRAKWRKRER 115
>gi|327282538|ref|XP_003225999.1| PREDICTED: retinal homeobox protein Rx-B-like [Anolis carolinensis]
Length = 495
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 81/143 (56%), Gaps = 31/143 (21%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG+ D D ++K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 287 DGKLSDEDQPKKKH--RRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 344
Query: 72 QVWFQNRRAKFRRNERNFISHRNL-DAPT----------------SEQPL-----PPCTN 109
QVWFQNRRAK+RR E+ ++ L D+P S PL PP +N
Sbjct: 345 QVWFQNRRAKWRRQEKLEVTSMKLQDSPILSFNRSPQPSTIGTIGSNLPLESWLNPPMSN 404
Query: 110 ATPLSSAPPSSSHSFDFCAMPHS 132
++PL + P F A P S
Sbjct: 405 SSPLQTLP-------GFVASPQS 420
>gi|157278547|ref|NP_001098374.1| Rx3 protein [Oryzias latipes]
gi|15667414|emb|CAC69975.1| Rx3 protein [Oryzias latipes]
Length = 292
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E +K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 95 DDETQKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 154
Query: 79 RAKFRRNERNFISHRNL-DAPTS 100
RAK+RR E+ +S L D P+S
Sbjct: 155 RAKWRRQEKLEVSSIKLQDTPSS 177
>gi|406719566|dbj|BAM45082.1| dorsal root ganglia homeobox, partial [Pelodiscus sinensis]
Length = 199
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 13 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 72
Query: 76 QNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTN 109
QNRRAK+R+ ER S + T + PP N
Sbjct: 73 QNRRAKWRKTERG-ASDQEGSKETMAEVAPPVRN 105
>gi|296222754|ref|XP_002757333.1| PREDICTED: retinal homeobox protein Rx [Callithrix jacchus]
Length = 344
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|432861307|ref|XP_004069603.1| PREDICTED: homeobox protein aristaless-like 4-like [Oryzias
latipes]
Length = 367
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 162 DKSEAESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 221
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 222 QNRRAKWRKRER 233
>gi|357625509|gb|EHJ75931.1| hypothetical protein KGM_15249 [Danaus plexippus]
Length = 285
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QL LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 90 KQRRSRTNFTLEQLGELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 149
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSS 121
E H+ L S PL PC A P S P SS
Sbjct: 150 ESQM--HKGLLVGGSGTPLEPCRVA-PYVSVPRLSS 182
>gi|391333106|ref|XP_003740963.1| PREDICTED: paired box protein Pax-6-like [Metaseiulus occidentalis]
Length = 551
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 74/126 (58%), Gaps = 19/126 (15%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG+D+ R K K +RNRT+F Q++ALEK FERTHYPD F RE+LA ++ L EAR+
Sbjct: 305 DGDDETAARLRLKRKLQRNRTSFTMEQIDALEKEFERTHYPDVFAREKLAARIDLPEARI 364
Query: 72 QVWFQNRRAKFR-----RNERNF------ISHR--------NLDAPTSEQPLPPCTNATP 112
QVWF NRRAK+R RN+RN ISH N+ P P T P
Sbjct: 365 QVWFSNRRAKWRREEKLRNQRNCRQEASPISHETTTDSPPLNMSQGGPGTPNPSQTALEP 424
Query: 113 LSSAPP 118
LS++PP
Sbjct: 425 LSASPP 430
>gi|194853423|ref|XP_001968163.1| GG24714 [Drosophila erecta]
gi|190660030|gb|EDV57222.1| GG24714 [Drosophila erecta]
Length = 416
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 78 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 134
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 135 IQVWFQNRRAKWRKQEK 151
>gi|348507210|ref|XP_003441149.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oreochromis
niloticus]
Length = 308
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 54/72 (75%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWFQ
Sbjct: 32 DFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 91
Query: 77 NRRAKFRRNERN 88
NRRAK+R+ ER
Sbjct: 92 NRRAKWRKTERG 103
>gi|195431545|ref|XP_002063797.1| GK15860 [Drosophila willistoni]
gi|194159882|gb|EDW74783.1| GK15860 [Drosophila willistoni]
Length = 692
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 56/75 (74%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
DD K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWF
Sbjct: 575 DDASSLADKSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWF 634
Query: 76 QNRRAKFRRNERNFI 90
QNRRAKFR+ ER+ I
Sbjct: 635 QNRRAKFRKQERHAI 649
>gi|121484123|gb|ABM54404.1| ALX4 [Pan paniscus]
Length = 146
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 50 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 109
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 110 RAKWRKRER 118
>gi|344030244|ref|NP_001230664.1| retina and anterior neural fold homeobox protein 2 [Taeniopygia
guttata]
Length = 228
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 11 CDGEDD---DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
DGE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L
Sbjct: 17 GDGESTPPAAAEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLP 76
Query: 68 EARVQVWFQNRRAKFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
E RVQVWFQNRRAK+RR E+ S L D P PP T N P+S++ P
Sbjct: 77 EVRVQVWFQNRRAKWRRQEKMEASSMKLHDTPVLSFNRPPMTPNVGPMSNSLP 129
>gi|122892625|gb|ABM67377.1| ALX4 [Hylobates klossii]
Length = 144
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 48 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 107
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 108 RAKWRKRER 116
>gi|326934275|ref|XP_003213217.1| PREDICTED: retinal homeobox protein Rx1-like [Meleagris gallopavo]
Length = 228
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 72/113 (63%), Gaps = 5/113 (4%)
Query: 11 CDGEDD---DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
DGE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L
Sbjct: 17 GDGEGTPPAAAEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLP 76
Query: 68 EARVQVWFQNRRAKFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
E RVQVWFQNRRAK+RR E+ S L D P PP T N P+S++ P
Sbjct: 77 EVRVQVWFQNRRAKWRRQEKMEASSMKLHDTPMLSFNRPPMTANVGPMSNSLP 129
>gi|344030211|ref|NP_989435.2| retinal homeobox protein Rx2 [Gallus gallus]
gi|18203380|sp|Q9PVY0.1|RX1_CHICK RecName: Full=Retinal homeobox protein Rx1; Short=cRax1
gi|23451261|gb|AAN32719.1|AF420601_1 homeobox transcription factor RAX2 [Gallus gallus]
gi|6002393|dbj|BAA84748.1| homeobox protein cRaxL/Rax1/Rx1 [Gallus gallus]
Length = 228
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 30 EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRA 89
Query: 81 KFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
K+RR E+ S L D P PP T N P+S++ P
Sbjct: 90 KWRRQEKMEASSMKLHDTPMLSFNRPPMTANVGPMSNSLP 129
>gi|4566741|gb|AAD23438.1|AF115392_1 retinal homeobox protein RX [Homo sapiens]
Length = 346
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|195350151|ref|XP_002041605.1| GM16755 [Drosophila sechellia]
gi|194123378|gb|EDW45421.1| GM16755 [Drosophila sechellia]
Length = 348
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 66/113 (58%), Gaps = 11/113 (9%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNERNFI-------SHRNLDAPTSEQP----LPPCTNATPLSSAPPSSSHSFD 125
+ E+ +LD + L T L PP SS+S D
Sbjct: 62 KQEKIGGLGGDYKEGALDLDVAYDDSAVLGQLDSALGGTLLPDTPPQSSNSLD 114
>gi|354503342|ref|XP_003513740.1| PREDICTED: homeobox protein aristaless-like 3-like [Cricetulus
griseus]
Length = 479
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 275 GLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 334
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 335 VWFQNRRAKWRKRER 349
>gi|126116581|ref|NP_038463.2| retinal homeobox protein Rx [Homo sapiens]
gi|296452886|sp|Q9Y2V3.2|RX_HUMAN RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|119583497|gb|EAW63093.1| retina and anterior neural fold homeobox [Homo sapiens]
gi|162317600|gb|AAI56202.1| Retina and anterior neural fold homeobox [synthetic construct]
gi|162318774|gb|AAI57123.1| Retina and anterior neural fold homeobox [synthetic construct]
Length = 346
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|114673345|ref|XP_001142510.1| PREDICTED: retinal homeobox protein Rx isoform 2 [Pan troglodytes]
Length = 346
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|170590608|ref|XP_001900064.1| Retinal homeobox protein Rx3 [Brugia malayi]
gi|158592696|gb|EDP31294.1| Retinal homeobox protein Rx3, putative [Brugia malayi]
Length = 185
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
LT G DD R K K RRNRTTFN QLN LE F ++HYPD F REELA K+ L
Sbjct: 56 LTPHSGGAADD----RSKRKQRRNRTTFNQQQLNELEAAFRKSHYPDVFAREELAVKINL 111
Query: 67 SEARVQVWFQNRRAKFRRNERN 88
EARVQVWFQNRRAK+R+ ER+
Sbjct: 112 PEARVQVWFQNRRAKWRKTERD 133
>gi|426386097|ref|XP_004059529.1| PREDICTED: retinal homeobox protein Rx [Gorilla gorilla gorilla]
Length = 346
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|3550811|dbj|BAA32684.1| homeodomain protein [Drosophila melanogaster]
Length = 93
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 18 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 77
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 78 KQERHAI 84
>gi|327281440|ref|XP_003225456.1| PREDICTED: dorsal root ganglia homeobox protein-like [Anolis
carolinensis]
Length = 261
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 54/72 (75%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWFQ
Sbjct: 23 DFDDGFLRRKQRRNRTTFTLQQLEALETVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 82
Query: 77 NRRAKFRRNERN 88
NRRAK+R+ ER
Sbjct: 83 NRRAKWRKTERG 94
>gi|332237569|ref|XP_003267978.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like 3
[Nomascus leucogenys]
Length = 343
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWFQNRRAK+R+ ER R D
Sbjct: 199 VWFQNRRAKWRKRERYGKIQRGXD 222
>gi|326923683|ref|XP_003208064.1| PREDICTED: dorsal root ganglia homeobox protein-like [Meleagris
gallopavo]
Length = 299
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 62 DFDDGFLRRKQ--RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 119
Query: 75 FQNRRAKFRRNERN 88
FQNRRAK+R+ ER
Sbjct: 120 FQNRRAKWRKTERG 133
>gi|109122304|ref|XP_001087324.1| PREDICTED: retinal homeobox protein Rx [Macaca mulatta]
Length = 347
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|340369432|ref|XP_003383252.1| PREDICTED: hypothetical protein LOC100635424 [Amphimedon
queenslandica]
Length = 337
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 19/110 (17%)
Query: 12 DGEDDDYDYERRKP---------KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAK 62
DG + + ER+ P K RR RTTF S QL LEK FERTHYPD F RE+LA
Sbjct: 61 DGAEGE---ERKSPLSNGDLLLKKKRRYRTTFTSFQLRELEKAFERTHYPDVFTREDLAN 117
Query: 63 KVCLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATP 112
+V L+EARVQVWFQNRRAK+R+ E+ + L +PT++ P +TP
Sbjct: 118 RVELTEARVQVWFQNRRAKWRKKEK----QQGLPSPTAQ---PIAATSTP 160
>gi|47230477|emb|CAF99670.1| unnamed protein product [Tetraodon nigroviridis]
Length = 263
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 32/139 (23%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 66 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 125
Query: 84 RNER------------------------NFISHRN---LDAPTSEQPLP----PCTNATP 112
+ ER N+ +N + ++ P+P PC TP
Sbjct: 126 KRERFGQMQQVRTHFSTAYELPLLTRPENYAQIQNPSWIGGSSAASPVPGCVVPCDTVTP 185
Query: 113 -LSSAPPSSSHSFDFCAMP 130
++ P S+S DF +P
Sbjct: 186 CMTPHPHSASGVSDFLGVP 204
>gi|195028334|ref|XP_001987031.1| GH20193 [Drosophila grimshawi]
gi|193903031|gb|EDW01898.1| GH20193 [Drosophila grimshawi]
Length = 219
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 110 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 169
Query: 84 RNERNFI 90
+ ER+ I
Sbjct: 170 KQERHAI 176
>gi|395749930|ref|XP_003779033.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pongo
abelii]
Length = 346
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|363735465|ref|XP_001234656.2| PREDICTED: dorsal root ganglia homeobox protein [Gallus gallus]
Length = 260
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 82 QNRRAKWRKTERG 94
>gi|444301236|gb|AGD98731.1| paired box 6.2 [Callorhinchus milii]
Length = 302
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 15/132 (11%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 73 SVAANGEDSDESQIRLQLKRKLQRNRTSFTQDQIEALEKEFERTHYPDVFARERLAAKID 132
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDA---PTSEQPLP-PCTNATP 112
L EAR+QVWF NRRAK+RR E+ N SH +++ P+ Q +P P T+AT
Sbjct: 133 LPEARIQVWFSNRRAKWRREEKLRNQRRQACNGSSHVPINSSFTPSVYQSMPQPVTSATM 192
Query: 113 LSSAPPSSSHSF 124
++ S S+S+
Sbjct: 193 MARNDTSLSNSY 204
>gi|91087879|ref|XP_969925.1| PREDICTED: similar to transcription factor protein [Tribolium
castaneum]
gi|270012765|gb|EFA09213.1| munster [Tribolium castaneum]
Length = 220
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 78/118 (66%), Gaps = 8/118 (6%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
EDD + +RK RR RTTF+++QL LE+ F +THYPD F REELA ++ L+EARVQ
Sbjct: 34 AEDDANNASKRKQ--RRYRTTFSNYQLEELERAFHKTHYPDVFFREELALRIDLTEARVQ 91
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTS-EQPLPPCTNATPLSSAPPSSSHSFDFCAM 129
VWFQNRRAK+R+ E++ + +N++ P++ PL +PL + PP S + F +
Sbjct: 92 VWFQNRRAKWRKQEKSVKNAQNINIPSACSTPL-----ESPLLNFPPEQSPTNLFLGL 144
>gi|301615770|ref|XP_002937332.1| PREDICTED: homeobox protein aristaless-like 4-like [Xenopus
(Silurana) tropicalis]
Length = 360
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 175 DKTESESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWF 234
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 235 QNRRAKWRKRER 246
>gi|348504974|ref|XP_003440036.1| PREDICTED: retinal homeobox protein Rx1-like [Oreochromis
niloticus]
Length = 355
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 137 EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRA 196
Query: 81 KFRRNERNFISHRNL-DAP--TSEQPLPPCTNATPLSSAPP 118
K+RR E+ S L D+P + +P P T P++++ P
Sbjct: 197 KWRRQEKMDASTMKLHDSPMLSFNRPAPVHTGMGPMTNSLP 237
>gi|213623642|gb|AAI70015.1| Retinal homeobox-like transcription factor [Xenopus laevis]
gi|213625185|gb|AAI70013.1| Retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 9 LRCDGEDD-----DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKK 63
LR DG + D E K K RRNRTTF ++QL+ LE+ FER+HYPD + REELA K
Sbjct: 13 LREDGSTPTRGTPEEDNEIPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMK 72
Query: 64 VCLSEARVQVWFQNRRAKFRRNERNFISHRNL-DAPT---SEQPLP----PCTNATPLSS 115
V L E RVQVWFQNRRAK+RR E+ S L D+P S P+ P +N PL S
Sbjct: 73 VSLPEVRVQVWFQNRRAKWRRQEKLESSSSTLHDSPLLSFSRSPIATTMGPLSNTLPLES 132
>gi|158297213|ref|XP_317481.4| AGAP007985-PA [Anopheles gambiae str. PEST]
gi|157015086|gb|EAA12409.4| AGAP007985-PA [Anopheles gambiae str. PEST]
Length = 354
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 56/77 (72%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 66 SDDGGDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 122
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 123 IQVWFQNRRAKWRKQEK 139
>gi|148227630|ref|NP_001089185.1| retina and anterior neural fold homeobox 2 [Xenopus laevis]
gi|86440325|gb|ABC96115.1| retinal homeobox-like transcription factor [Xenopus laevis]
Length = 228
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 73/120 (60%), Gaps = 13/120 (10%)
Query: 9 LRCDGEDD-----DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKK 63
LR DG + D E K K RRNRTTF ++QL+ LE+ FER+HYPD + REELA K
Sbjct: 13 LREDGSTPTRGTPEEDNEIPKKKHRRNRTTFTTYQLHELERAFERSHYPDVYSREELAMK 72
Query: 64 VCLSEARVQVWFQNRRAKFRRNERNFISHRNL-DAPT---SEQP----LPPCTNATPLSS 115
V L E RVQVWFQNRRAK+RR E+ S L D+P S P + P +N PL S
Sbjct: 73 VSLPEVRVQVWFQNRRAKWRRQEKLESSSSTLHDSPLLSFSRSPRATTMGPLSNTLPLES 132
>gi|19168460|dbj|BAB85815.1| aristaless protein [Gryllus bimaculatus]
Length = 391
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 4/102 (3%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+GE D++ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+
Sbjct: 88 EGELDEFAPKRKQ---RRYRTTFTSFQLEELEKAFTRTHYPDVFTREELAIKIGLTEARI 144
Query: 72 QVWFQNRRAKFRRNER-NFISHRNLDAPTSEQPLPPCTNATP 112
QVWFQNRRAK+R+ E+ H +S P PP T P
Sbjct: 145 QVWFQNRRAKWRKQEKVGPQGHPYNPYLSSGAPQPPSTVVAP 186
>gi|410921502|ref|XP_003974222.1| PREDICTED: retinal homeobox protein Rx1-like [Takifugu rubripes]
Length = 350
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 140 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 199
Query: 84 RNERNFISHRNL-DAP--TSEQPLPPCTNATPLSSAPP 118
R E+ S L D+P + +P P T+ P+S++ P
Sbjct: 200 RQEKMDASTMKLHDSPMLSFNRPTPVHTSMAPMSNSLP 237
>gi|80751123|ref|NP_001032182.1| dorsal root ganglia homeobox protein [Danio rerio]
gi|58759849|gb|AAW81987.1| paired-like homeodomain transcription factor DRG11 [Danio rerio]
Length = 287
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 31 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFAREELAMKINLTEARVQVWF 90
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 91 QNRRAKWRKTERG 103
>gi|190337325|gb|AAI62791.1| Dorsal root ganglia homeobox [Danio rerio]
gi|190340175|gb|AAI62787.1| Dorsal root ganglia homeobox [Danio rerio]
Length = 287
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 31 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 90
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 91 QNRRAKWRKTERG 103
>gi|410967992|ref|XP_003990497.1| PREDICTED: homeobox protein aristaless-like 3 [Felis catus]
Length = 372
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 168 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 227
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 228 VWFQNRRAKWRKRER 242
>gi|406719564|dbj|BAM45081.1| dorsal root ganglia homeobox, partial [Gallus gallus]
Length = 156
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 14 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 73
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 74 QNRRAKWRKTERG 86
>gi|441603513|ref|XP_004093153.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Nomascus leucogenys]
Length = 337
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|189234030|ref|XP_967102.2| PREDICTED: similar to CG34367 CG34367-PC [Tribolium castaneum]
Length = 254
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 58 KQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 117
Query: 86 ERNFISHRNLD--APTSEQPLPPC 107
E ++ +P+S PL PC
Sbjct: 118 ESQIQKGMMMNNHSPSSSTPLEPC 141
>gi|47206453|emb|CAF89478.1| unnamed protein product [Tetraodon nigroviridis]
Length = 433
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 74/138 (53%), Gaps = 20/138 (14%)
Query: 13 GEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GED + R K K +RNRT+F Q++ALEK FERTHYPD F RE LA K+ L EAR
Sbjct: 193 GEDSEETQMRLQLKRKLQRNRTSFTQDQIDALEKEFERTHYPDVFARERLANKIDLPEAR 252
Query: 71 VQVWFQNRRAKFRRNERNFISHRNLDAPTSE------------QPLPPCTNATPLSSAP- 117
+QVWF NRRAK+RR E+ R P++ QPL T LSS
Sbjct: 253 IQVWFSNRRAKWRREEKLRNQRRQGSNPSAHIPISSSFSCSIYQPLAQTTTPVSLSSGSM 312
Query: 118 -----PSSSHSFDFCAMP 130
P +HS+ AMP
Sbjct: 313 LGRSDPVLAHSYSLPAMP 330
>gi|197359132|gb|ACH69782.1| retinal homeobox protein 2 [Anabarilius grahami]
Length = 284
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 72/114 (63%), Gaps = 11/114 (9%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 93 DEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 152
Query: 79 RAKFRRNERNFISHRNL--------DAPTSEQPLPPCTNATPLS---SAPPSSS 121
RAK+RR E+ L + PT + P TN+ PL S+P SS+
Sbjct: 153 RAKWRRQEKIDTGSMKLHDSPMLSFNRPTMAPNVGPMTNSLPLDPWLSSPLSSA 206
>gi|296208775|ref|XP_002751237.1| PREDICTED: homeobox protein aristaless-like 3 [Callithrix jacchus]
Length = 343
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GHPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|195122770|ref|XP_002005884.1| GI20720 [Drosophila mojavensis]
gi|193910952|gb|EDW09819.1| GI20720 [Drosophila mojavensis]
Length = 216
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 107 KSKQRRIRTTFTSNQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 166
Query: 84 RNERNFI 90
+ ER+ +
Sbjct: 167 KQERHAV 173
>gi|345327987|ref|XP_001508209.2| PREDICTED: dorsal root ganglia homeobox protein-like, partial
[Ornithorhynchus anatinus]
Length = 173
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 82 QNRRAKWRKTERG 94
>gi|397514171|ref|XP_003827369.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx [Pan
paniscus]
Length = 309
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 130 GEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 189
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 190 VWFQNRRAKWRRQEKLEVSSMKLQDSP 216
>gi|432905591|ref|XP_004077452.1| PREDICTED: dorsal root ganglia homeobox protein-like [Oryzias
latipes]
Length = 308
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 49/74 (66%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 32 DFDDGFLRRKQ--RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 89
Query: 75 FQNRRAKFRRNERN 88
FQNRRAK+R+ ER
Sbjct: 90 FQNRRAKWRKTERG 103
>gi|358418744|ref|XP_003584036.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 123 GDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 183 VWFQNRRAKWRRQEKLEVSSMKLQDSP 209
>gi|18859337|ref|NP_571301.1| retinal homeobox protein Rx2 [Danio rerio]
gi|18202035|sp|O42357.1|RX2_DANRE RecName: Full=Retinal homeobox protein Rx2
gi|2240028|gb|AAB62326.1| retinal homeobox protein [Danio rerio]
Length = 327
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 127 DEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 186
Query: 79 RAKFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
RAK+RR E+ L D+P PP N P+S++ P
Sbjct: 187 RAKWRRQEKMDTGTMKLHDSPIRSFNRPPMAPNVGPMSNSLP 228
>gi|449281838|gb|EMC88811.1| Retinal homeobox protein Rx2, partial [Columba livia]
Length = 233
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 18/144 (12%)
Query: 11 CDGEDDD---YDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
DGE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L
Sbjct: 19 GDGEGTPPAATEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLP 78
Query: 68 EARVQVWFQNRRAKFRRNERNFISHRNL-DAPT-------SEQPLPPCTNATPLSS--AP 117
E RVQVWFQNRRAK+RR E+ ++ L D+P P+ P ++ PL + +P
Sbjct: 79 EVRVQVWFQNRRAKWRRQEKLEVTSMKLQDSPILSFNRSPQATPMGPLSSNLPLETWLSP 138
Query: 118 PSSSHSF-----DFCAMPHSQCNS 136
P S + F A P S S
Sbjct: 139 PVPSSTALQTLPGFVASPQSLPGS 162
>gi|2240024|gb|AAB62324.1| retinal homeobox protein [Mus musculus]
Length = 342
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 68/111 (61%), Gaps = 10/111 (9%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
G+ + E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 AAGDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL------PPCTNATPLSS 115
VQVWFQNRRAK+RR E+ +S L + PL PP + PL +
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQ----DSPLLSFIRSPPSSALAPLGT 226
>gi|403284219|ref|XP_003933476.1| PREDICTED: homeobox protein aristaless-like 3 [Saimiri boliviensis
boliviensis]
Length = 343
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GRPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|348512783|ref|XP_003443922.1| PREDICTED: homeobox protein aristaless-like 4-like [Oreochromis
niloticus]
Length = 368
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRA
Sbjct: 168 ESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRA 227
Query: 81 KFRRNER 87
K+R+ ER
Sbjct: 228 KWRKRER 234
>gi|89274179|ref|NP_038861.2| retinal homeobox protein Rx [Mus musculus]
gi|341941993|sp|O35602.2|RX_MOUSE RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|1932775|gb|AAC53129.1| paired-type homeobox gene [Mus musculus]
gi|19354403|gb|AAH24731.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|37589415|gb|AAH58757.1| Retina and anterior neural fold homeobox [Mus musculus]
gi|148677729|gb|EDL09676.1| retina and anterior neural fold homeobox, isoform CRA_a [Mus
musculus]
Length = 342
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPL------PPCTNATPLSS 115
VWFQNRRAK+RR E+ +S L + PL PP + PL +
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQ----DSPLLSFSRSPPSSALAPLGT 226
>gi|340709231|ref|XP_003393215.1| PREDICTED: homeobox protein aristaless-like [Bombus terrestris]
Length = 280
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ E DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 26 SETEVDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 82
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 83 IQVWFQNRRAKWRKQEK 99
>gi|109013372|ref|XP_001099295.1| PREDICTED: ALX homeobox 3 [Macaca mulatta]
Length = 343
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLSDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|170033842|ref|XP_001844785.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167874862|gb|EDS38245.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 53/65 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFNS QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNERN 88
+NE+
Sbjct: 62 KNEKG 66
>gi|291398309|ref|XP_002715836.1| PREDICTED: aristaless-like homeobox 3 [Oryctolagus cuniculus]
Length = 343
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|189313477|gb|ACD88755.1| Pax6 isoform 2 [Limulus polyphemus]
Length = 456
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 64/102 (62%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
++D R K K RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 241 DEDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQV 300
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSS 115
WF NRRAK+RR E+ R ++ PT L P P++
Sbjct: 301 WFSNRRAKWRREEKLRNQRRVVEQPTGTTVLAPPNGRLPING 342
>gi|359079339|ref|XP_003587831.1| PREDICTED: retinal homeobox protein Rx-like [Bos taurus]
Length = 352
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 60/83 (72%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 123 GDSKLLEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 182
Query: 73 VWFQNRRAKFRRNERNFISHRNL 95
VWFQNRRAK+RR E+ +S L
Sbjct: 183 VWFQNRRAKWRRQEKLEVSSMKL 205
>gi|301620871|ref|XP_002939787.1| PREDICTED: dorsal root ganglia homeobox protein-like [Xenopus
(Silurana) tropicalis]
Length = 263
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 54/72 (75%), Gaps = 2/72 (2%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWFQ
Sbjct: 26 DDGFLRRKQ--RRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 83
Query: 77 NRRAKFRRNERN 88
NRRAK+R+ ER
Sbjct: 84 NRRAKWRKTERG 95
>gi|355558252|gb|EHH15032.1| hypothetical protein EGK_01064, partial [Macaca mulatta]
Length = 254
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 50 GLSDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 110 VWFQNRRAKWRKRER 124
>gi|301614476|ref|XP_002936715.1| PREDICTED: retinal homeobox protein Rx-B [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 79/121 (65%), Gaps = 9/121 (7%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 123 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 182
Query: 79 RAKFRRNERNFISHRNL-DAPT-----SEQP--LPPCTNATPLSS-APPSSSHSFDFCAM 129
RAK+RR E+ ++ L D+P S QP + +++ PL S PS S+S ++
Sbjct: 183 RAKWRRQEKLEVTSMKLQDSPILSFNRSPQPSAMSAISSSLPLDSWLTPSISNSTALQSL 242
Query: 130 P 130
P
Sbjct: 243 P 243
>gi|21667881|gb|AAM74161.1|AF513712_1 Pax-6 protein [Euprymna scolopes]
Length = 503
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+GE D+ R K K +RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 261 NGETDEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARI 320
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 321 QVWFSNRRAKWRREEK 336
>gi|2240022|gb|AAB62323.1| retinal homeobox 2A [Xenopus laevis]
Length = 325
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 22/121 (18%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAPT-----SEQP----------------LPPCTNATPLSSA 116
RAK+RR E+ ++ L D+P S QP PP +N+T L S
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSPMLSFNRSPQPSAMSALSSSLPLDSWLTPPLSNSTALQSL 241
Query: 117 P 117
P
Sbjct: 242 P 242
>gi|195064095|ref|XP_001996496.1| GH23963 [Drosophila grimshawi]
gi|193892042|gb|EDV90908.1| GH23963 [Drosophila grimshawi]
Length = 545
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 252 GDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 311
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R++D
Sbjct: 312 VWFSNRRAKWRREEKLRTQRRSVD 335
>gi|195450696|ref|XP_002072593.1| GK13683 [Drosophila willistoni]
gi|194168678|gb|EDW83579.1| GK13683 [Drosophila willistoni]
Length = 552
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R++D
Sbjct: 311 VWFSNRRAKWRREEKLRTQRRSVD 334
>gi|195575589|ref|XP_002077660.1| GD23036 [Drosophila simulans]
gi|194189669|gb|EDX03245.1| GD23036 [Drosophila simulans]
Length = 355
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNR
Sbjct: 2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNR 61
Query: 79 RAKFRRNERNFISHRNLD---------------APTSEQPLPPCTNATPLSSAPPSSSHS 123
RAK+R+ E+ I D A + T L PP SS+S
Sbjct: 62 RAKWRKQEK--IGGLGGDYKEGALDLDVAYDDSAVLGQLDSALGGGGTLLPDTPPQSSNS 119
Query: 124 FD 125
D
Sbjct: 120 LD 121
>gi|189313475|gb|ACD88754.1| Pax6 isoform 1 [Limulus polyphemus]
Length = 456
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 64/102 (62%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
++D R K K RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 241 DEDSQLRMRLKRKLXRNRTSFTNEQIEALEKEFERTHYPDVFARERLAEKITLPEARIQV 300
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSS 115
WF NRRAK+RR E+ R ++ PT L P P++
Sbjct: 301 WFSNRRAKWRREEKLRNQRRVVEQPTGTTVLAPPNGRLPING 342
>gi|313475156|dbj|BAJ41033.1| aristaless-like transcription factor [Scaphechinus mirabilis]
Length = 463
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF S+QL +EKVF+RTHYPD + RE+LA + L+EARVQVWFQNRRAK+R+
Sbjct: 135 KKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNRRAKWRKR 194
Query: 86 ER--NFISHRNLDAPTS-EQPLPP 106
ER F + R L + E P+ P
Sbjct: 195 ERFQQFQNMRGLGPGSGYEMPIAP 218
>gi|148230627|ref|NP_001081689.1| retinal homeobox protein Rx-B [Xenopus laevis]
gi|292495034|sp|O42567.2|RXB_XENLA RecName: Full=Retinal homeobox protein Rx-B; AltName: Full=Retina
and anterior neural fold homeobox protein B; AltName:
Full=Rx2A; Short=Xrx2
gi|114107824|gb|AAI23154.1| Rx2A protein [Xenopus laevis]
Length = 325
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 22/121 (18%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAPT-----SEQP----------------LPPCTNATPLSSA 116
RAK+RR E+ ++ L D+P S QP PP +N+T L S
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSPMLSFNRSPQPSAMSALSSSLPLDSWLTPPLSNSTALQSL 241
Query: 117 P 117
P
Sbjct: 242 P 242
>gi|3204110|emb|CAA11364.1| Pax6 [Branchiostoma floridae]
Length = 483
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F
Sbjct: 220 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFA 279
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 280 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 310
>gi|21396471|gb|AAM49062.1| transcription factor DRG11 [Mus musculus]
Length = 95
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 54/72 (75%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWFQ
Sbjct: 14 DFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQ 73
Query: 77 NRRAKFRRNERN 88
NRRAK+R+ ER
Sbjct: 74 NRRAKWRKTERG 85
>gi|391345791|ref|XP_003747166.1| PREDICTED: homeobox protein aristaless-like [Metaseiulus
occidentalis]
Length = 317
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE D+ +RK RR RTTF S+QL LEK F +THYPD F REELA +V L+EARVQ
Sbjct: 42 GEIILDDFPKRKQ--RRYRTTFTSYQLEELEKAFGKTHYPDVFTREELAMRVDLTEARVQ 99
Query: 73 VWFQNRRAKFRRNER---NFISHRNLDAPTSEQPLPPCTNAT 111
VWFQNRRAK+R+ E+ N + +S Q LPP T ++
Sbjct: 100 VWFQNRRAKWRKQEKANGNPNPGAGFNPYSSPQSLPPSTTSS 141
>gi|291229234|ref|XP_002734580.1| PREDICTED: retinal homeobox protein-like protein-like [Saccoglossus
kowalevskii]
Length = 279
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 4/101 (3%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E +K KP+R+RTTF+S QL LE+ F RTHYPD F RE LA+++ L E+RVQVWFQNRRA
Sbjct: 106 EHKKGKPKRSRTTFSSRQLQELERAFRRTHYPDMFTRERLARRIGLPESRVQVWFQNRRA 165
Query: 81 KFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSS 121
K+R+ E++F H L+ P P TP + PS+S
Sbjct: 166 KWRKKEQHF--HYLLECQGKSYPYLPTGLHTP--TLIPSAS 202
>gi|195029469|ref|XP_001987595.1| GH22006 [Drosophila grimshawi]
gi|193903595|gb|EDW02462.1| GH22006 [Drosophila grimshawi]
Length = 879
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
Query: 13 GEDDDYDYER-RKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G DD+ E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 529 GSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 588
Query: 72 QVWFQNRRAKFRRNERN 88
QVWFQNRRAK+RR E++
Sbjct: 589 QVWFQNRRAKWRRQEKS 605
>gi|259013350|ref|NP_001158383.1| paired box 6 [Saccoglossus kowalevskii]
gi|32307795|gb|AAP79294.1| pax6 [Saccoglossus kowalevskii]
Length = 457
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 2/97 (2%)
Query: 11 CDGEDDDYDYERR-KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
G+DD+ R K K +RNRT+F +Q+ LEK FERTHYPD F RE LA+K+ L EA
Sbjct: 219 ASGDDDEAQARLRLKRKLQRNRTSFTQYQIETLEKEFERTHYPDVFARERLAQKIDLPEA 278
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNL-DAPTSEQPLP 105
R+QVWF NRRAK+RR E+ R + APTS LP
Sbjct: 279 RIQVWFSNRRAKWRREEKLRNQRRQMSSAPTSSSHLP 315
>gi|195118214|ref|XP_002003635.1| GI21809 [Drosophila mojavensis]
gi|193914210|gb|EDW13077.1| GI21809 [Drosophila mojavensis]
Length = 392
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNERNFISHRN-----LDAPTSEQPL------PPCTNATPLSSAPPSSSHSFD 125
+ E+ + LD + + + T L PP SS+S D
Sbjct: 62 KQEKMGGEYEKGAGLELDVAFDDSAVLGQLDSALASGGTLLPDTPPQSSNSLD 114
>gi|350425133|ref|XP_003494022.1| PREDICTED: homeobox protein ARX-like [Bombus impatiens]
Length = 385
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ E DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 144 SETEVDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 200
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 201 IQVWFQNRRAKWRKQEK 217
>gi|195402191|ref|XP_002059690.1| GJ13300 [Drosophila virilis]
gi|194155904|gb|EDW71088.1| GJ13300 [Drosophila virilis]
gi|263359635|gb|ACY70471.1| hypothetical protein DVIR88_6g0008 [Drosophila virilis]
Length = 549
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 61/84 (72%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 252 GDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 311
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R++D
Sbjct: 312 VWFSNRRAKWRREEKLRTQRRSVD 335
>gi|311245261|ref|XP_003121760.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Sus scrofa]
Length = 348
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 131 EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRA 190
Query: 81 KFRRNERNFISHRNL-DAP 98
K+RR E+ +S L D+P
Sbjct: 191 KWRRQEKLEVSSMKLQDSP 209
>gi|224052522|ref|XP_002187168.1| PREDICTED: dorsal root ganglia homeobox protein [Taeniopygia
guttata]
Length = 261
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 54/73 (73%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F +EELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTKEELALKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERN 88
QNRRAK+R+ ER
Sbjct: 82 QNRRAKWRKTERG 94
>gi|402855587|ref|XP_003892401.1| PREDICTED: homeobox protein aristaless-like 3 [Papio anubis]
Length = 343
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|391340589|ref|XP_003744622.1| PREDICTED: retinal homeobox protein Rx3-like [Metaseiulus
occidentalis]
Length = 301
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 68/105 (64%), Gaps = 11/105 (10%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R ++ DY RRK RR RTTF S QL LEK F RTHYPD F REELA +V L+EA
Sbjct: 60 RSSPQEFGGDYPRRKQ--RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAVRVDLTEA 117
Query: 70 RVQVWFQNRRAKFRRNER-------NFISHRNLDAPTSEQPLPPC 107
RVQVWFQNRRAK+R+ E+ +F S ++L APT LPP
Sbjct: 118 RVQVWFQNRRAKWRKQEKTSSPTRGDFSSAQSL-APTGPS-LPPS 160
>gi|3204118|emb|CAA11368.1| Pax6 [Branchiostoma floridae]
Length = 463
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F
Sbjct: 197 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFA 256
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 257 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 287
>gi|148677730|gb|EDL09677.1| retina and anterior neural fold homeobox, isoform CRA_b [Mus
musculus]
Length = 379
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 159 GDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 218
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPL------PPCTNATPLSS 115
VWFQNRRAK+RR E+ +S L + PL PP + PL +
Sbjct: 219 VWFQNRRAKWRRQEKLEVSSMKLQ----DSPLLSFSRSPPSSALAPLGT 263
>gi|157137459|ref|XP_001663998.1| hypothetical protein AaeL_AAEL013809 [Aedes aegypti]
gi|108869695|gb|EAT33920.1| AAEL013809-PA [Aedes aegypti]
Length = 358
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFNS QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNSLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNER 87
+NE+
Sbjct: 62 KNEK 65
>gi|426218849|ref|XP_004003649.1| PREDICTED: homeobox protein aristaless-like 3 [Ovis aries]
Length = 330
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 126 GLPDSMEVAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 185
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 186 VWFQNRRAKWRKRER 200
>gi|195066771|ref|XP_001996841.1| GH11036 [Drosophila grimshawi]
gi|193891514|gb|EDV90380.1| GH11036 [Drosophila grimshawi]
Length = 372
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNER----NFISHRNLD--------APTSEQPLPPCTNATPLSSAPPSSSHSFD 125
+ E+ ++ LD A + T L PP SS+S D
Sbjct: 62 KQEKIGGADYKDGSGLDLNVDFDDSAVLGQLDSALAGGGTLLPDTPPQSSNSLD 115
>gi|444732073|gb|ELW72394.1| Paired box protein Pax-6 [Tupaia chinensis]
Length = 601
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 76/131 (58%), Gaps = 18/131 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLP----PCTN 109
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P P
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPTTPGNG 308
Query: 110 ATPLSSAPPSS 120
+T L+ AP SS
Sbjct: 309 STGLAMAPLSS 319
>gi|397478868|ref|XP_003810757.1| PREDICTED: homeobox protein aristaless-like 3, partial [Pan
paniscus]
Length = 295
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 91 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 150
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 151 VWFQNRRAKWRKRER 165
>gi|383865116|ref|XP_003708021.1| PREDICTED: homeobox protein aristaless-like [Megachile rotundata]
Length = 261
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ E DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 27 SEAEVDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 83
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 84 IQVWFQNRRAKWRKQEK 100
>gi|117650666|gb|ABK54278.1| Pax6 [Branchiostoma belcheri]
Length = 461
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F
Sbjct: 198 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFA 257
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 258 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 288
>gi|3204112|emb|CAA11365.1| Pax6 [Branchiostoma floridae]
Length = 431
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F
Sbjct: 189 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFA 248
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 249 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 279
>gi|4102043|gb|AAD01418.1| homeobox protein [Homo sapiens]
Length = 343
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|113204604|ref|NP_006483.2| homeobox protein aristaless-like 3 [Homo sapiens]
gi|426330701|ref|XP_004026345.1| PREDICTED: homeobox protein aristaless-like 3 [Gorilla gorilla
gorilla]
gi|215273931|sp|O95076.2|ALX3_HUMAN RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|85566666|gb|AAI12008.1| ALX3 protein [Homo sapiens]
gi|109731688|gb|AAI13429.1| ALX homeobox 3 [Homo sapiens]
gi|119576834|gb|EAW56430.1| aristaless-like homeobox 3 [Homo sapiens]
Length = 343
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|348522046|ref|XP_003448537.1| PREDICTED: retinal homeobox protein Rx2-like [Oreochromis
niloticus]
Length = 326
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 127 DEEHAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 186
Query: 79 RAKFRRNER 87
RAK+RR E+
Sbjct: 187 RAKWRRQEK 195
>gi|300796399|ref|NP_001179482.1| homeobox protein aristaless-like 3 [Bos taurus]
gi|296489406|tpg|DAA31519.1| TPA: aristaless-like homeobox 3-like [Bos taurus]
Length = 343
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSVELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|1778017|gb|AAB40616.1| Pax-6 [Doryteuthis opalescens]
Length = 460
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+GE D+ R K K +RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 218 NGETDEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARI 277
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 278 QVWFSNRRAKWRREEK 293
>gi|126321609|ref|XP_001366025.1| PREDICTED: retinal homeobox protein Rx-like [Monodelphis domestica]
Length = 350
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 128 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQVWFQNR 187
Query: 79 RAKFRRNERNFISHRNL-DAPT-SEQPLPPCTNATPL 113
RAK+RR E+ ++ L D+P S PP T P+
Sbjct: 188 RAKWRRQEKLEVTSMKLQDSPILSFNRSPPSTALPPI 224
>gi|256017083|dbj|BAH97320.1| aristaless-like homeobox protein [Hemicentrotus pulcherrimus]
Length = 381
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 62/86 (72%), Gaps = 3/86 (3%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S+QL +EKVF+RTHYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 94 KRKKRRNRTTFTSYQLEEMEKVFQRTHYPDVYCREQLALRCDLTEARVQVWFQNRRAKWR 153
Query: 84 RNER--NFISHRNLDAPTS-EQPLPP 106
+ ER F + R L + E P+ P
Sbjct: 154 KRERFQQFQNMRGLGPGSGYEMPIAP 179
>gi|345324653|ref|XP_001505453.2| PREDICTED: hypothetical protein LOC100073723 [Ornithorhynchus
anatinus]
Length = 732
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 522 GLPDPMELSKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 581
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 582 VWFQNRRAKWRKRER 596
>gi|195401629|ref|XP_002059415.1| GJ17468 [Drosophila virilis]
gi|194142421|gb|EDW58827.1| GJ17468 [Drosophila virilis]
Length = 881
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Query: 13 GEDDDYDYER-RKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G DD+ E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 528 GSDDEGQDENCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 587
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+RR E+
Sbjct: 588 QVWFQNRRAKWRRQEK 603
>gi|351704314|gb|EHB07233.1| Homeobox protein aristaless-like 3 [Heterocephalus glaber]
Length = 332
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 136 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 195
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 196 VWFQNRRAKWRKRER 210
>gi|195486714|ref|XP_002091622.1| GE12148 [Drosophila yakuba]
gi|194177723|gb|EDW91334.1| GE12148 [Drosophila yakuba]
Length = 906
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 548 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 607
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 608 WFQNRRAKWRRQEK 621
>gi|395830733|ref|XP_003788473.1| PREDICTED: retinal homeobox protein Rx [Otolemur garnettii]
Length = 344
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|297664163|ref|XP_002810521.1| PREDICTED: homeobox protein aristaless-like 3 [Pongo abelii]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|114559041|ref|XP_524801.2| PREDICTED: ALX homeobox 3 [Pan troglodytes]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|498022|gb|AAA40109.1| oculorhombin [Mus musculus]
Length = 284
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 53 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 112
Query: 66 LSEARVQVWFQNRRAKFR-----RNERNFISHRNLDAPTSE-------QPLPPCTNATPL 113
L EAR+QVWF NRRAK+R RN+R S+ PTS QP+P T TP+
Sbjct: 113 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPTSSSFSTSVYQPIPQPT--TPV 170
Query: 114 SS 115
SS
Sbjct: 171 SS 172
>gi|47225662|emb|CAG08005.1| unnamed protein product [Tetraodon nigroviridis]
Length = 216
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 6 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 65
Query: 84 RNERNFISHRNL-DAP--TSEQPLPPCTNATPLSSAPP 118
R E+ S L D+P + +P P T+ P+S++ P
Sbjct: 66 RQEKMDASTMKLHDSPMLSFNRPTPVHTSMAPMSNSLP 103
>gi|345802097|ref|XP_854590.2| PREDICTED: uncharacterized protein LOC611786 [Canis lupus
familiaris]
Length = 782
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 578 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 637
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 638 VWFQNRRAKWRKRER 652
>gi|194881725|ref|XP_001974972.1| GG22067 [Drosophila erecta]
gi|190658159|gb|EDV55372.1| GG22067 [Drosophila erecta]
Length = 898
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 540 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 599
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 600 WFQNRRAKWRRQEK 613
>gi|148669964|gb|EDL01911.1| aristaless 3 [Mus musculus]
Length = 258
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 54 GLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 113
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 114 VWFQNRRAKWRKRER 128
>gi|7106250|ref|NP_031467.1| homeobox protein aristaless-like 3 [Mus musculus]
gi|13626105|sp|O70137.1|ALX3_MOUSE RecName: Full=Homeobox protein aristaless-like 3; AltName:
Full=Proline-rich transcription factor ALX3
gi|3041869|gb|AAC15094.1| proline-rich transcription factor ALX3 [Mus musculus]
gi|74206384|dbj|BAE24916.1| unnamed protein product [Mus musculus]
gi|146327428|gb|AAI41538.1| Aristaless-like homeobox 3 [synthetic construct]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|312382759|gb|EFR28101.1| hypothetical protein AND_04364 [Anopheles darlingi]
Length = 158
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 54/67 (80%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFNS QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNSMQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNERNFI 90
++E+ +
Sbjct: 62 KSEKTSV 68
>gi|281485132|gb|ADA70356.1| paired-like family homeodomain transcription factor [Heliconius
erato]
Length = 265
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 54/77 (70%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ DD D K K RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 33 GSADSDDADEFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 92
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 93 IQVWFQNRRAKWRKQEK 109
>gi|195346236|ref|XP_002039672.1| GM15784 [Drosophila sechellia]
gi|194135021|gb|EDW56537.1| GM15784 [Drosophila sechellia]
Length = 895
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 537 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 596
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 597 WFQNRRAKWRRQEK 610
>gi|149025640|gb|EDL81883.1| rCG29053 [Rattus norvegicus]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|115702398|ref|XP_785238.2| PREDICTED: homeobox protein aristaless-like 4-like
[Strongylocentrotus purpuratus]
Length = 353
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 66/95 (69%), Gaps = 6/95 (6%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
DD + +R+K RRNRTTF S QL +EKVF++THYPD + RE+LA + L+EARVQVW
Sbjct: 97 GDDANAKRKK---RRNRTTFTSFQLEEMEKVFQKTHYPDVYCREQLALRCDLTEARVQVW 153
Query: 75 FQNRRAKFRRNER--NFISHRNLDAPT-SEQPLPP 106
FQNRRAK+R+ ER F + R + T E P+ P
Sbjct: 154 FQNRRAKWRKRERFSQFNTMRAMATGTPYEMPIAP 188
>gi|4138292|emb|CAA07775.1| Rx2 protein [Oryzias latipes]
Length = 188
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 72/116 (62%), Gaps = 16/116 (13%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 2 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNR 61
Query: 79 RAKFRRNERNFISHRNL-DAPT---SEQPLPPCTN------------ATPLSSAPP 118
RAK+RR E+ S L D+P + P+PP +P+SSA P
Sbjct: 62 RAKWRRQEKMDTSTMKLHDSPMLSFNRPPMPPSVGQVGNPMPLDPWLTSPISSATP 117
>gi|28573580|ref|NP_726006.2| retinal homeobox [Drosophila melanogaster]
gi|17380504|sp|Q9W2Q1.2|RX_DROME RecName: Full=Retinal homeobox protein Rx; Short=DRx; Short=DRx1
gi|21392130|gb|AAM48419.1| RE39020p [Drosophila melanogaster]
gi|28380638|gb|AAF46639.3| retinal homeobox [Drosophila melanogaster]
gi|220960168|gb|ACL92620.1| Rx-PA [synthetic construct]
Length = 873
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 515 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 574
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 575 WFQNRRAKWRRQEK 588
>gi|55742834|ref|NP_001007013.1| homeobox protein aristaless-like 3 [Rattus norvegicus]
gi|40018990|gb|AAR37014.1| aristaless-related ALX3 [Rattus norvegicus]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|3204114|emb|CAA11366.1| Pax6 [Branchiostoma floridae]
Length = 439
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F
Sbjct: 197 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFA 256
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 257 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 287
>gi|432103936|gb|ELK30769.1| Homeobox protein aristaless-like 3 [Myotis davidii]
Length = 354
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 150 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 209
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 210 VWFQNRRAKWRKRER 224
>gi|195032847|ref|XP_001988573.1| GH11236 [Drosophila grimshawi]
gi|193904573|gb|EDW03440.1| GH11236 [Drosophila grimshawi]
Length = 372
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNER----NFISHRNLD--------APTSEQPLPPCTNATPLSSAPPSSSHSFD 125
+ E+ ++ LD A + T L PP SS+S D
Sbjct: 62 KQEKIGGADYKDGSGLDLNVDFDDSAVLGQLDSALAGGGTLLPDTPPQSSNSLD 115
>gi|348587018|ref|XP_003479265.1| PREDICTED: homeobox protein aristaless-like 3-like [Cavia
porcellus]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|270006382|gb|EFA02830.1| twin of eyeless [Tribolium castaneum]
Length = 524
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 67/104 (64%), Gaps = 1/104 (0%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 298 GDEDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 357
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSA 116
VWF NRRAK+RR E+ R +D + P P P++S
Sbjct: 358 VWFSNRRAKWRREEKLRNQRRAVDQVGAVSP-PSSAGRLPINSG 400
>gi|2950355|emb|CAA11241.1| homebox protein DRx [Drosophila melanogaster]
Length = 902
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 546 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 605
Query: 74 WFQNRRAKFRRNERN 88
WFQNRRAK+RR E++
Sbjct: 606 WFQNRRAKWRRQEKS 620
>gi|350583559|ref|XP_003125909.3| PREDICTED: homeobox protein aristaless-like 3-like [Sus scrofa]
Length = 448
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 244 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 303
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 304 VWFQNRRAKWRKRER 318
>gi|348511737|ref|XP_003443400.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oreochromis
niloticus]
Length = 285
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|432960958|ref|XP_004086512.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Oryzias
latipes]
Length = 285
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|195382485|ref|XP_002049960.1| GJ20457 [Drosophila virilis]
gi|194144757|gb|EDW61153.1| GJ20457 [Drosophila virilis]
Length = 216
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QLN LEK+F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 107 KSKQRRIRTTFTSSQLNELEKIFLETHYPDIYTREEIASKLHLTEARVQVWFQNRRAKFR 166
Query: 84 RNERNFI 90
+ ER+ +
Sbjct: 167 KQERHAV 173
>gi|158292555|ref|XP_313972.3| AGAP005096-PA [Anopheles gambiae str. PEST]
gi|157017047|gb|EAA09363.3| AGAP005096-PA [Anopheles gambiae str. PEST]
Length = 898
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 536 DDEGGDDNCSKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 595
Query: 74 WFQNRRAKFRRNERN 88
WFQNRRAK+RR E++
Sbjct: 596 WFQNRRAKWRRQEKS 610
>gi|195126164|ref|XP_002007544.1| GI12329 [Drosophila mojavensis]
gi|193919153|gb|EDW18020.1| GI12329 [Drosophila mojavensis]
Length = 593
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 69/102 (67%), Gaps = 8/102 (7%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ +GED D + + +PK RRNRTTF++ QL+ LEK FE++HYP RE+LA + LSE
Sbjct: 354 IDIEGEDSDSE-DSDQPKFRRNRTTFSAEQLDELEKEFEKSHYPCVGTREKLAARTGLSE 412
Query: 69 ARVQVWFQNRRAKFRRNER-NFISHRN------LDAPTSEQP 103
ARVQVWF NRRAK+RR++R N + R APT ++P
Sbjct: 413 ARVQVWFSNRRAKWRRHQRVNLLKQRGSTSTSPTPAPTQQEP 454
>gi|410914461|ref|XP_003970706.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Takifugu
rubripes]
Length = 285
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|440909664|gb|ELR59549.1| Homeobox protein aristaless-like 3, partial [Bos grunniens mutus]
Length = 273
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 76 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 135
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 136 VWFQNRRAKWRKRER 150
>gi|328719785|ref|XP_003246859.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Acyrthosiphon
pisum]
Length = 594
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 55/73 (75%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
DDD R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 297 DDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 356
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 357 FSNRRAKWRREEK 369
>gi|195118670|ref|XP_002003859.1| GI18136 [Drosophila mojavensis]
gi|193914434|gb|EDW13301.1| GI18136 [Drosophila mojavensis]
Length = 459
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 61/86 (70%), Gaps = 6/86 (6%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 235 KQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 294
Query: 86 ERNFISHRNL----DAPTSEQPLPPC 107
E H+ + +P PL PC
Sbjct: 295 ENQM--HKGILLSSRSPPVSTPLEPC 318
>gi|4883932|gb|AAD31712.1|AF134350_1 transcription factor Toy [Drosophila melanogaster]
Length = 543
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 311 VWFSNRRAKWRREEKMRTQRRSAD 334
>gi|587456|emb|CAA57161.1| alx3 [Mesocricetus auratus]
Length = 346
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 142 GLPDTMELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 201
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 202 VWFQNRRAKWRKRER 216
>gi|195175466|ref|XP_002028472.1| GL17563 [Drosophila persimilis]
gi|198462201|ref|XP_002135664.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
gi|194103225|gb|EDW25268.1| GL17563 [Drosophila persimilis]
gi|198139762|gb|EDY70832.1| GA27636 [Drosophila pseudoobscura pseudoobscura]
Length = 546
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 249 GDEDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 308
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 309 VWFSNRRAKWRREEKMRTQRRSAD 332
>gi|440647293|dbj|BAM74253.1| Pax-6 variant form3 [Idiosepius paradoxus]
Length = 499
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE D+ R K K +RNRT+F + Q+ ALEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 218 GETDEQMRIRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLAQKIDLPEARIQ 277
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 278 VWFSNRRAKWRREEK 292
>gi|410977842|ref|XP_003995309.1| PREDICTED: retinal homeobox protein Rx [Felis catus]
Length = 390
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 58/77 (75%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 128 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 187
Query: 79 RAKFRRNERNFISHRNL 95
RAK+RR E+ +S L
Sbjct: 188 RAKWRRQEKLEVSSMKL 204
>gi|328719783|ref|XP_003246858.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Acyrthosiphon
pisum]
gi|328719787|ref|XP_003246860.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Acyrthosiphon
pisum]
Length = 613
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 55/73 (75%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
DDD R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 316 DDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 375
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 376 FSNRRAKWRREEK 388
>gi|17861402|gb|AAL39178.1| GH01528p [Drosophila melanogaster]
Length = 357
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNR
Sbjct: 2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNR 61
Query: 79 RAKFRRNERNFISHRNLD---------------APTSEQPLPPCTNATPLSSAPPSSSHS 123
RAK+R+ E+ I D A + T L PP SS+S
Sbjct: 62 RAKWRKQEK--IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNS 119
Query: 124 FD 125
D
Sbjct: 120 LD 121
>gi|403268181|ref|XP_003926160.1| PREDICTED: retinal homeobox protein Rx [Saimiri boliviensis
boliviensis]
Length = 282
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE + ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GEAKLSEEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|395511533|ref|XP_003760013.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx
[Sarcophilus harrisii]
Length = 319
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 128 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAVKVNLPEVRVQVWFQNR 187
Query: 79 RAKFRRNERNFISHRNL-DAPT 99
RAK+RR E+ ++ L D+P
Sbjct: 188 RAKWRRQEKLEVTSMKLQDSPI 209
>gi|17137502|ref|NP_477330.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|4972032|emb|CAB43867.1| Munster protein [Drosophila melanogaster]
gi|7296182|gb|AAF51474.1| PvuII-PstI homology 13 [Drosophila melanogaster]
gi|94400518|gb|ABF17900.1| FI01102p [Drosophila melanogaster]
Length = 357
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNR
Sbjct: 2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNR 61
Query: 79 RAKFRRNERNFISHRNLD---------------APTSEQPLPPCTNATPLSSAPPSSSHS 123
RAK+R+ E+ I D A + T L PP SS+S
Sbjct: 62 RAKWRKQEK--IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNS 119
Query: 124 FD 125
D
Sbjct: 120 LD 121
>gi|194211012|ref|XP_001918035.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Equus caballus]
Length = 346
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 142 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 201
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 202 VWFQNRRAKWRKRER 216
>gi|45549245|ref|NP_524638.3| twin of eyeless, isoform A [Drosophila melanogaster]
gi|15291285|gb|AAK92911.1| GH14454p [Drosophila melanogaster]
gi|45444822|gb|AAF59395.4| twin of eyeless, isoform A [Drosophila melanogaster]
gi|220942324|gb|ACL83705.1| toy-PA [synthetic construct]
gi|220952546|gb|ACL88816.1| toy-PA [synthetic construct]
Length = 543
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 311 VWFSNRRAKWRREEKMRTQRRSAD 334
>gi|195355670|ref|XP_002044313.1| GM13021 [Drosophila sechellia]
gi|194130600|gb|EDW52643.1| GM13021 [Drosophila sechellia]
Length = 543
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 311 VWFSNRRAKWRREEKMRTQRRSAD 334
>gi|194913445|ref|XP_001982698.1| GG16402 [Drosophila erecta]
gi|190647914|gb|EDV45217.1| GG16402 [Drosophila erecta]
Length = 543
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 311 VWFSNRRAKWRREEKMRTQRRSAD 334
>gi|62414116|ref|NP_001014818.1| paired mesoderm homeobox protein 2B [Danio rerio]
gi|326673538|ref|XP_003199912.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Danio rerio]
gi|56900854|gb|AAW31722.1| paired-like homeobox 2b [Danio rerio]
gi|190337114|gb|AAI62881.1| Paired-like homeobox 2b [Danio rerio]
gi|190339584|gb|AAI62887.1| Paired-like homeobox 2b [Danio rerio]
Length = 284
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|431896467|gb|ELK05879.1| Homeobox protein aristaless-like 3 [Pteropus alecto]
Length = 315
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 107 GLPDSMELVKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 166
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 167 VWFQNRRAKWRKRER 181
>gi|281339716|gb|EFB15300.1| hypothetical protein PANDA_014123 [Ailuropoda melanoleuca]
Length = 219
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|172355888|ref|NP_001116492.1| paired-like homeobox 2b [Xenopus (Silurana) tropicalis]
gi|171846498|gb|AAI61760.1| phox2b protein [Xenopus (Silurana) tropicalis]
Length = 293
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|195456001|ref|XP_002074959.1| GK23335 [Drosophila willistoni]
gi|194171044|gb|EDW85945.1| GK23335 [Drosophila willistoni]
Length = 937
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 582 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 641
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 642 WFQNRRAKWRRQEK 655
>gi|47227513|emb|CAG04661.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|444724758|gb|ELW65356.1| Homeobox protein aristaless-like 3 [Tupaia chinensis]
Length = 260
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 56 GLPDSMESAKNKSKKRRNRTTFSTAQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 115
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 116 VWFQNRRAKWRKRER 130
>gi|4519625|dbj|BAA75672.1| DjPax-6 [Dugesia japonica]
Length = 550
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E+DD + ++ K +RNRT+F++ QL++LEK FERTHYPD F RE+LA K+ L EAR+QV
Sbjct: 274 ENDDMRIKLKR-KLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQV 332
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNAT 111
WF NRRAK+RR E+ +NL +S TN T
Sbjct: 333 WFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVT 370
>gi|198458256|ref|XP_001360971.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
gi|198136277|gb|EAL25547.2| GA10035 [Drosophila pseudoobscura pseudoobscura]
Length = 921
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 548 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 607
Query: 74 WFQNRRAKFRRNERN 88
WFQNRRAK+RR E++
Sbjct: 608 WFQNRRAKWRRQEKS 622
>gi|147904024|ref|NP_001084383.1| paired-like homeobox 2b [Xenopus laevis]
gi|38425329|gb|AAR19766.1| homeodomain protein [Xenopus laevis]
Length = 293
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|405965818|gb|EKC31172.1| Homeobox protein aristaless [Crassostrea gigas]
Length = 332
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ D DY +RK RR RTTF S QL LE+ F++THYPD F+REELA ++ L+EARVQ
Sbjct: 105 GDRDIEDYGKRKQ--RRYRTTFTSFQLEELERAFQKTHYPDVFMREELAMRIDLTEARVQ 162
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ E+
Sbjct: 163 VWFQNRRAKWRKKEK 177
>gi|328792237|ref|XP_624630.3| PREDICTED: homeobox protein aristaless-like isoform 2 [Apis
mellifera]
Length = 259
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ E DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 26 SETEVDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 82
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 83 IQVWFQNRRAKWRKQEK 99
>gi|12746271|gb|AAK07422.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
Length = 333
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 58/76 (76%), Gaps = 1/76 (1%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 125 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRAKWR 184
Query: 84 RNERNFISHRNL-DAP 98
R E+ +S L D+P
Sbjct: 185 RQEKLEVSSMKLQDSP 200
>gi|377685604|gb|AFB74471.1| PAX6, partial [Schmidtea polychroa]
Length = 326
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E+DD + K K +RNRT+F++ QL++LEK FERTHYPD F RE+LA K+ L EAR+QV
Sbjct: 188 ENDDMRI-KLKRKLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQV 246
Query: 74 WFQNRRAKFRRNER------NFISHRNLDAPTSEQPLPPCTNATPLSSAPPSS 120
WF NRRAK+RR E+ N + N + T++ + N LS+ +S
Sbjct: 247 WFSNRRAKWRREEKLRRQRQNLMLGSNGTSSTADTNVTTNGNTQCLSTTGQNS 299
>gi|195153960|ref|XP_002017891.1| GL17060 [Drosophila persimilis]
gi|194113687|gb|EDW35730.1| GL17060 [Drosophila persimilis]
Length = 920
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 547 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 606
Query: 74 WFQNRRAKFRRNERN 88
WFQNRRAK+RR E++
Sbjct: 607 WFQNRRAKWRRQEKS 621
>gi|195585235|ref|XP_002082395.1| GD11547 [Drosophila simulans]
gi|194194404|gb|EDX07980.1| GD11547 [Drosophila simulans]
Length = 903
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 545 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 604
Query: 74 WFQNRRAKFRRNERN 88
WFQNRRAK+RR E++
Sbjct: 605 WFQNRRAKWRRQEKS 619
>gi|194758607|ref|XP_001961553.1| GF15026 [Drosophila ananassae]
gi|190615250|gb|EDV30774.1| GF15026 [Drosophila ananassae]
Length = 325
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 67/113 (59%), Gaps = 11/113 (9%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNER-NFISH------RNLDAPTSEQP----LPPCTNATPLSSAPPSSSHSFD 125
+ E+ I +LD + L T L PP SS+S D
Sbjct: 62 KQEKIGGIGGDYKEGALDLDVSYDDSAVLGQLDTALGGTLLPDTPPQSSNSLD 114
>gi|16758430|ref|NP_446130.1| retinal homeobox protein Rx [Rattus norvegicus]
gi|18203127|sp|Q9JLT7.1|RX_RAT RecName: Full=Retinal homeobox protein Rx; AltName: Full=Retina and
anterior neural fold homeobox protein
gi|7384990|gb|AAF61631.1|AF135839_1 homeodomain protein RX [Rattus norvegicus]
gi|12746272|gb|AAK07423.1| retinal homeobox transcription factor Rx/rax [Rattus norvegicus]
gi|149064497|gb|EDM14700.1| retina and anterior neural fold homeobox, isoform CRA_b [Rattus
norvegicus]
Length = 342
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 131 EPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRA 190
Query: 81 KFRRNERNFISHRNL-DAP 98
K+RR E+ +S L D+P
Sbjct: 191 KWRRQEKLEVSSMKLQDSP 209
>gi|194853616|ref|XP_001968194.1| GG24732 [Drosophila erecta]
gi|190660061|gb|EDV57253.1| GG24732 [Drosophila erecta]
Length = 352
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 65/117 (55%), Gaps = 17/117 (14%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNERNFISHRNLD---------------APTSEQPLPPCTNATPLSSAPPSSSHSFD 125
+ E+ I D A + T L PP SS+S D
Sbjct: 62 KQEK--IGGLGGDYKEGTLDLDVAYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLD 116
>gi|319740964|gb|ADV69001.1| retinal homeobox [Patiria miniata]
Length = 314
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G D D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 200 GGADLGEDGPDGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRV 259
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+RR E+
Sbjct: 260 QVWFQNRRAKWRRQEK 275
>gi|355755063|gb|EHH58930.1| Retina and anterior neural fold homeobox protein, partial [Macaca
fascicularis]
Length = 117
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 23 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 82
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 83 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 111
>gi|149064496|gb|EDM14699.1| retina and anterior neural fold homeobox, isoform CRA_a [Rattus
norvegicus]
Length = 344
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 15 DDDYDYERRKPKP--RRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
D E PK RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 125 DSKLSEEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 184
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 185 VWFQNRRAKWRRQEKLEVSSMKLQDSP 211
>gi|195469409|ref|XP_002099630.1| GE14563 [Drosophila yakuba]
gi|194185731|gb|EDW99342.1| GE14563 [Drosophila yakuba]
Length = 543
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 60/84 (71%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 251 GDEDSQMRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLADKIGLPEARIQ 310
Query: 73 VWFQNRRAKFRRNERNFISHRNLD 96
VWF NRRAK+RR E+ R+ D
Sbjct: 311 VWFSNRRAKWRREEKMRTQRRSAD 334
>gi|432090369|gb|ELK23795.1| Homeobox protein aristaless-like 4 [Myotis davidii]
Length = 187
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRA
Sbjct: 34 ESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRA 93
Query: 81 KFRRNER 87
K+R+ ER
Sbjct: 94 KWRKRER 100
>gi|195119474|ref|XP_002004256.1| GI19710 [Drosophila mojavensis]
gi|193909324|gb|EDW08191.1| GI19710 [Drosophila mojavensis]
Length = 884
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 540 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 599
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 600 WFQNRRAKWRRQEK 613
>gi|422919068|pdb|2M0C|A Chain A, Solution Nmr Structure Of Homeobox Domain Of Human Alx4,
Northeast Structural Genomics Consortium (Nesg) Target
Hr4490c
Length = 75
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 6 KGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 65
Query: 84 RNER 87
+ ER
Sbjct: 66 KRER 69
>gi|395734890|ref|XP_002814749.2| PREDICTED: uncharacterized protein LOC100444086 [Pongo abelii]
Length = 276
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|197359130|gb|ACH69781.1| paired box protein 6a [Anabarilius grahami]
Length = 284
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 60 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 119
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 120 LPEARIQVWFSNRRAKWRREEK 141
>gi|47219885|emb|CAF97155.1| unnamed protein product [Tetraodon nigroviridis]
Length = 206
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 68/109 (62%), Gaps = 8/109 (7%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 1 GDAKLSDDESPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQ 60
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSS 121
VWFQNRRAK+RR E+ +S L +S PP LS PSSS
Sbjct: 61 VWFQNRRAKWRRQEKLEVSSIKLQDTSS----PPSL----LSFGRPSSS 101
>gi|301778625|ref|XP_002924730.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx-like
[Ailuropoda melanoleuca]
Length = 278
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|340730421|gb|AEK64851.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL +E+VF++THYPD ++RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 109 KKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRRAKWR 168
Query: 84 RNER 87
+ ER
Sbjct: 169 KKER 172
>gi|344268964|ref|XP_003406326.1| PREDICTED: retinal homeobox protein Rx-like [Loxodonta africana]
Length = 341
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+G+ + E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 116 ANGDAKLAEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 175
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 176 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 204
>gi|74224022|dbj|BAE23875.1| unnamed protein product [Mus musculus]
gi|119588641|gb|EAW68235.1| paired box gene 6 (aniridia, keratitis), isoform CRA_b [Homo
sapiens]
Length = 286
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 53 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 112
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 113 LPEARIQVWFSNRRAKWRREEK 134
>gi|301608175|ref|XP_002933659.1| PREDICTED: homeobox protein ARX-like [Xenopus (Silurana)
tropicalis]
Length = 536
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 279 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 338
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAP-----TSEQPLPPCTNATP 112
L+EARVQVWFQNRRAK+R+ E+ P ++ PL P +A+P
Sbjct: 339 DLTEARVQVWFQNRRAKWRKREKAGAQTHAPGLPFPGPLSASHPLGPYLDASP 391
>gi|194209207|ref|XP_001917289.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2B-like [Equus caballus]
Length = 315
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|308494689|ref|XP_003109533.1| CRE-VAB-3 protein [Caenorhabditis remanei]
gi|308245723|gb|EFO89675.1| CRE-VAB-3 protein [Caenorhabditis remanei]
Length = 462
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR
Sbjct: 204 VDQEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEAR 263
Query: 71 VQVWFQNRRAKFRRNE--RNFISHRNLDAPTSEQ---PLPPCTNATPLS---SAPPSSSH 122
+QVWF NRRAK+RR E RN S +D+ S P P + +S +P S+ +
Sbjct: 264 IQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMSNPIGSPASTPN 323
Query: 123 SF 124
F
Sbjct: 324 RF 325
>gi|115501621|gb|ABI98858.1| paired box 6 transcript variant 13 [Columba livia]
gi|115501625|gb|ABI98860.1| paired box 6 transcript variant 15 [Columba livia]
gi|115501629|gb|ABI98862.1| paired box 6 transcript variant 17 [Columba livia]
gi|115501633|gb|ABI98864.1| paired box 6 transcript variant 19 [Columba livia]
gi|115501637|gb|ABI98866.1| paired box 6 transcript variant 21 [Columba livia]
gi|115501641|gb|ABI98868.1| paired box 6 transcript variant 23 [Columba livia]
gi|115501645|gb|ABI98870.1| paired box 6 transcript variant 25 [Columba livia]
gi|115501649|gb|ABI98872.1| paired box 6 transcript variant 27 [Columba livia]
gi|115501653|gb|ABI98874.1| paired box 6 transcript variant 29 [Columba livia]
gi|115501657|gb|ABI98876.1| paired box 6 transcript variant 31 [Columba livia]
gi|115501661|gb|ABI98878.1| paired box 6 transcript variant 33 [Columba livia]
gi|115501665|gb|ABI98880.1| paired box 6 transcript variant 35 [Columba livia]
gi|115501669|gb|ABI98882.1| paired box 6 transcript variant 37 [Columba livia]
Length = 286
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 53 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 112
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 113 LPEARIQVWFSNRRAKWRREEK 134
>gi|195376715|ref|XP_002047138.1| GJ13266 [Drosophila virilis]
gi|194154296|gb|EDW69480.1| GJ13266 [Drosophila virilis]
Length = 594
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/100 (53%), Positives = 70/100 (70%), Gaps = 7/100 (7%)
Query: 6 MLTLRCDGED-DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
M+ + +G D +D D +PK RRNRTTF++ QL+ LEK FE++HYP RE+LA +
Sbjct: 356 MIDIEGEGSDSEDSD----QPKFRRNRTTFSAEQLDELEKEFEKSHYPCVGTREKLAART 411
Query: 65 CLSEARVQVWFQNRRAKFRRNER-NFISHRNLDAPTSEQP 103
LSEARVQVWF NRRAK+RR++R N + R+ A TS QP
Sbjct: 412 ALSEARVQVWFSNRRAKWRRHQRVNQLKQRD-SASTSPQP 450
>gi|395542879|ref|XP_003773352.1| PREDICTED: paired mesoderm homeobox protein 2B [Sarcophilus
harrisii]
Length = 265
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|317419844|emb|CBN81880.1| Aristaless-related homeobox protein [Dicentrarchus labrax]
Length = 463
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 73/127 (57%), Gaps = 18/127 (14%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 199 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 258
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSF 124
L+EARVQVWFQNRRAK+R+ E+ + A S P P PL++ P SH
Sbjct: 259 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPSGLPFP-----GPLAAGHP-LSHYL 307
Query: 125 DFCAMPH 131
+ PH
Sbjct: 308 EGGPFPH 314
>gi|195147184|ref|XP_002014560.1| GL18888 [Drosophila persimilis]
gi|198473726|ref|XP_001356418.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
gi|194106513|gb|EDW28556.1| GL18888 [Drosophila persimilis]
gi|198138081|gb|EAL33482.2| GA15474 [Drosophila pseudoobscura pseudoobscura]
Length = 376
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 14/116 (12%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNERNF--------------ISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFD 125
+ E+ +++ + A + T L PP SS+S D
Sbjct: 62 KQEKIGGSMGDYKEGGLDLDVAYDDSAAVLGQLDSALGAGGTLLPDTPPQSSNSLD 117
>gi|166795309|ref|NP_001107659.1| eyegone [Nasonia vitripennis]
Length = 649
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DGED D +PK RRNRTTF+ QL LEK FER+HYP RE LA K LSEAR
Sbjct: 439 GDGEDGSLDGSE-QPKFRRNRTTFSPEQLEELEKEFERSHYPCVSTRERLASKTSLSEAR 497
Query: 71 VQVWFQNRRAKFRRNER-NFISHRNLDAPTSEQPLPPCTNATP 112
VQVWF NRRAK+RR++R N + P S P T++ P
Sbjct: 498 VQVWFSNRRAKWRRHQRMNLLKRSPPHHPASGTSGVPATSSIP 540
>gi|115501623|gb|ABI98859.1| paired box 6 transcript variant 14 [Columba livia]
gi|115501627|gb|ABI98861.1| paired box 6 transcript variant 16 [Columba livia]
gi|115501631|gb|ABI98863.1| paired box 6 transcript variant 18 [Columba livia]
gi|115501635|gb|ABI98865.1| paired box 6 transcript variant 20 [Columba livia]
gi|115501639|gb|ABI98867.1| paired box 6 transcript variant 22 [Columba livia]
gi|115501643|gb|ABI98869.1| paired box 6 transcript variant 24 [Columba livia]
gi|115501647|gb|ABI98871.1| paired box 6 transcript variant 26 [Columba livia]
gi|115501651|gb|ABI98873.1| paired box 6 transcript variant 28 [Columba livia]
gi|115501655|gb|ABI98875.1| paired box 6 transcript variant 30 [Columba livia]
gi|115501659|gb|ABI98877.1| paired box 6 transcript variant 32 [Columba livia]
gi|115501663|gb|ABI98879.1| paired box 6 transcript variant 34 [Columba livia]
gi|115501667|gb|ABI98881.1| paired box 6 transcript variant 36 [Columba livia]
gi|115501671|gb|ABI98883.1| paired box 6 transcript variant 38 [Columba livia]
Length = 280
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 53 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 112
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 113 LPEARIQVWFSNRRAKWRREEK 134
>gi|213623920|gb|AAI70401.1| Aristaless-related homeobox 2 [Xenopus laevis]
gi|213625348|gb|AAI70403.1| Aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 271 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 330
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAP-----TSEQPLPPCTNATP 112
L+EARVQVWFQNRRAK+R+ E+ P ++ PL P +A+P
Sbjct: 331 DLTEARVQVWFQNRRAKWRKREKAGAQTHAPGLPFPGPLSAGHPLGPYLDASP 383
>gi|260791952|ref|XP_002590991.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276191|gb|EEN47002.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 300
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL +E+VF++THYPD ++RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 109 KKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRRAKWR 168
Query: 84 RNER 87
+ ER
Sbjct: 169 KKER 172
>gi|148229045|ref|NP_001086450.1| aristaless related homeobox [Xenopus laevis]
gi|46395020|gb|AAS91656.1| aristaless-related homeobox 2 [Xenopus laevis]
Length = 528
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/113 (46%), Positives = 68/113 (60%), Gaps = 12/113 (10%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 271 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 330
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAP-----TSEQPLPPCTNATP 112
L+EARVQVWFQNRRAK+R+ E+ P ++ PL P +A+P
Sbjct: 331 DLTEARVQVWFQNRRAKWRKREKAGAQTHAPGLPFPGPLSAGHPLGPYLDASP 383
>gi|147905324|ref|NP_001088286.1| paired-like homeobox 2b [Xenopus laevis]
gi|54038154|gb|AAH84305.1| LOC495120 protein [Xenopus laevis]
Length = 293
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKMER 158
>gi|118343665|ref|NP_001071654.1| transcription factor protein [Ciona intestinalis]
gi|70568894|dbj|BAE06312.1| transcription factor protein [Ciona intestinalis]
Length = 429
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 56/75 (74%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
DD D K K RR RTTF++ QL LE+ F++THYPD F REELA +V L+EARVQVWF
Sbjct: 209 DDQDRNSSKRKQRRYRTTFSAFQLEELERAFQKTHYPDVFTREELAMRVDLTEARVQVWF 268
Query: 76 QNRRAKFRRNERNFI 90
QNRRAK+R+ E+ I
Sbjct: 269 QNRRAKWRKREKQGI 283
>gi|395821545|ref|XP_003784098.1| PREDICTED: homeobox protein aristaless-like 3 [Otolemur garnettii]
Length = 343
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 142 DSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 201
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 202 QNRRAKWRKRER 213
>gi|380020309|ref|XP_003694031.1| PREDICTED: paired box protein Pax-6-like [Apis florea]
Length = 564
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 58/76 (76%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 314 SGDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARI 373
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 374 QVWFSNRRAKWRREEK 389
>gi|351699331|gb|EHB02250.1| Retinal homeobox protein Rx, partial [Heterocephalus glaber]
Length = 211
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNL-DAP 98
VWFQNRRAK+RR E+ +S L D+P
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>gi|291222403|ref|XP_002731203.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 379
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 70/105 (66%), Gaps = 15/105 (14%)
Query: 12 DGED------DDYDYERRKP-KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DG+D + D KP K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++
Sbjct: 147 DGDDQKLEPNSEQDSPSEKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRL 206
Query: 65 CLSEARVQVWFQNRRAKFRRNER-------NFISHRNLD-APTSE 101
LSEARVQVWFQNRRAK+R+ E+ NF+S N D +P SE
Sbjct: 207 DLSEARVQVWFQNRRAKWRKREKALGRESPNFLSPYNGDLSPVSE 251
>gi|148237828|ref|NP_001081687.1| retinal homeobox protein Rx-A [Xenopus laevis]
gi|292495033|sp|O42201.2|RXA_XENLA RecName: Full=Retinal homeobox protein Rx-A; Short=Rx1A;
Short=Xrx1; AltName: Full=Retina and anterior neural
fold homeobox protein A
gi|2232059|gb|AAB62322.1| retinal homeobox 1A [Xenopus laevis]
gi|213625316|gb|AAI70331.1| Retinal homeobox 1A [Xenopus laevis]
gi|213626887|gb|AAI70333.1| Retinal homeobox 1A [Xenopus laevis]
Length = 322
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAP 98
RAK+RR E+ ++ L D+P
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSP 202
>gi|410908863|ref|XP_003967910.1| PREDICTED: aristaless-related homeobox protein-like [Takifugu
rubripes]
Length = 463
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 73/127 (57%), Gaps = 18/127 (14%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 199 DGEDSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 258
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSF 124
L+EARVQVWFQNRRAK+R+ E+ + A S P P PL++ P SH
Sbjct: 259 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPSGLPFP-----GPLAAGHP-LSHYL 307
Query: 125 DFCAMPH 131
+ PH
Sbjct: 308 EGGPFPH 314
>gi|402869237|ref|XP_003898672.1| PREDICTED: paired mesoderm homeobox protein 2B [Papio anubis]
Length = 314
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|126331693|ref|XP_001365345.1| PREDICTED: paired mesoderm homeobox protein 2B-like [Monodelphis
domestica]
Length = 314
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|2394304|gb|AAB70267.1| retinal homeobox 1 [Xenopus laevis]
Length = 322
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAP 98
RAK+RR E+ ++ L D+P
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSP 202
>gi|148238213|ref|NP_001079329.1| aristaless related homeobox [Xenopus laevis]
gi|23499459|gb|AAN05413.1| aristaless-related homeobox [Xenopus laevis]
gi|213623330|gb|AAI69601.1| Aristaless related homeobox [Xenopus laevis]
Length = 527
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
C D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++ L+EAR
Sbjct: 276 CLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEAR 335
Query: 71 VQVWFQNRRAKFRRNERNFISHRNLDAP-----TSEQPLPPCTNATP 112
VQVWFQNRRAK+R+ E+ P ++ PL P +A+P
Sbjct: 336 VQVWFQNRRAKWRKREKAGAQTHTSGLPFPGPLSAGHPLGPYLDASP 382
>gi|346644870|ref|NP_001231107.1| paired box protein Pax-6 isoform 2 [Sus scrofa]
Length = 355
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 122 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 181
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 182 LPEARIQVWFSNRRAKWRREEK 203
>gi|340730419|gb|AEK64850.1| aristaless-like homeobox protein [Branchiostoma floridae]
Length = 300
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL +E+VF++THYPD ++RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 109 KKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRRAKWR 168
Query: 84 RNER 87
+ ER
Sbjct: 169 KKER 172
>gi|327259833|ref|XP_003214740.1| PREDICTED: paired box protein Pax-6-like isoform 6 [Anolis
carolinensis]
Length = 355
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 122 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 181
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 182 LPEARIQVWFSNRRAKWRREEK 203
>gi|115501617|gb|ABI98856.1| paired box 6 transcript variant 11 [Columba livia]
Length = 355
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 122 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 181
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 182 LPEARIQVWFSNRRAKWRREEK 203
>gi|115501613|gb|ABI98854.1| paired box 6 transcript variant 9 [Columba livia]
Length = 369
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 136 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 195
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 196 LPEARIQVWFSNRRAKWRREEK 217
>gi|327259825|ref|XP_003214736.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Anolis
carolinensis]
Length = 386
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 153 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 212
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 213 LPEARIQVWFSNRRAKWRREEK 234
>gi|115501609|gb|ABI98852.1| paired box 6 transcript variant 7 [Columba livia]
Length = 386
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 153 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 212
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 213 LPEARIQVWFSNRRAKWRREEK 234
>gi|410045098|ref|XP_003954413.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6 [Pan
troglodytes]
Length = 430
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 197 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 256
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 257 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 314
Query: 114 SS 115
SS
Sbjct: 315 SS 316
>gi|355761215|gb|EHH61775.1| hypothetical protein EGM_19864, partial [Macaca fascicularis]
Length = 258
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 50 GLSDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 109
Query: 73 VWFQNRRAKFRRNER 87
VWFQ RRAK+R+ ER
Sbjct: 110 VWFQTRRAKWRKRER 124
>gi|242024058|ref|XP_002432447.1| homeobox protein arx, putative [Pediculus humanus corporis]
gi|212517880|gb|EEB19709.1| homeobox protein arx, putative [Pediculus humanus corporis]
Length = 412
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%), Gaps = 3/74 (4%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E D++ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+QV
Sbjct: 134 ELDEFAPKRKQ---RRYRTTFTSFQLEELEKAFARTHYPDVFTREELAMKIGLTEARIQV 190
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+R+ E+
Sbjct: 191 WFQNRRAKWRKQEK 204
>gi|327259829|ref|XP_003214738.1| PREDICTED: paired box protein Pax-6-like isoform 4 [Anolis
carolinensis]
Length = 400
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 167 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 226
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 227 LPEARIQVWFSNRRAKWRREEK 248
>gi|363743158|ref|XP_003642783.1| PREDICTED: homeobox protein aristaless-like 3-like [Gallus gallus]
Length = 261
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 74/129 (57%), Gaps = 20/129 (15%)
Query: 22 RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAK 81
R K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + LSEARVQVWFQNRRAK
Sbjct: 70 RSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELSEARVQVWFQNRRAK 129
Query: 82 FRRNERNFISHRNLDAPTSEQPLPPCTNATPL---------------SSAPPSSSHSFDF 126
+R+ ER + + + P PLPP + P S PP S+ S
Sbjct: 130 WRKRER-YGKIQEVRTP----PLPPQHHTPPQLQNNLWPSSGSPAGPSLVPPDSAPSPRV 184
Query: 127 CAMPHSQCN 135
PH+ N
Sbjct: 185 SPYPHAHSN 193
>gi|348528067|ref|XP_003451540.1| PREDICTED: retinal homeobox protein Rx3-like [Oreochromis
niloticus]
Length = 305
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 103 DDESHKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 162
Query: 79 RAKFRRNERNFISHRNL-DAP 98
RAK+RR E+ +S L D P
Sbjct: 163 RAKWRRQEKLEVSSIKLQDTP 183
>gi|345491839|ref|XP_001607712.2| PREDICTED: aristaless-related homeobox protein-like [Nasonia
vitripennis]
Length = 421
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+ + DD+ +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 150 SEADVDDFAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 206
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 207 IQVWFQNRRAKWRKQEK 223
>gi|115501619|gb|ABI98857.1| paired box 6 transcript variant 12 [Columba livia]
Length = 349
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 122 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 181
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 182 LPEARIQVWFSNRRAKWRREEK 203
>gi|327259831|ref|XP_003214739.1| PREDICTED: paired box protein Pax-6-like isoform 5 [Anolis
carolinensis]
Length = 369
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 136 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 195
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 196 LPEARIQVWFSNRRAKWRREEK 217
>gi|403300665|ref|XP_003941040.1| PREDICTED: paired mesoderm homeobox protein 2B [Saimiri boliviensis
boliviensis]
Length = 242
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|325980258|gb|ADZ48388.1| Phox2b [Polyodon spathula]
Length = 248
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 77 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 136
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 137 NRRAKFRKQER 147
>gi|115501605|gb|ABI98850.1| paired box 6 transcript variant 5 [Columba livia]
Length = 400
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 167 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 226
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 227 LPEARIQVWFSNRRAKWRREEK 248
>gi|3204116|emb|CAA11367.1| Pax6 [Branchiostoma floridae]
Length = 462
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 9/91 (9%)
Query: 6 MLTL-----RCDGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFV 56
+LTL + DG +DD D R K K +RNR++F Q+ ALEK FERTHYPD F
Sbjct: 220 ILTLHGYQDQGDGSNDDSDEAQARLRLKRKLQRNRSSFTQEQIEALEKEFERTHYPDVFA 279
Query: 57 REELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RE LA K+ L EAR+QVWF NRRAK+RR E+
Sbjct: 280 RERLAAKIDLPEARIQVWFSNRRAKWRREEK 310
>gi|444732546|gb|ELW72836.1| Retinal homeobox protein Rx [Tupaia chinensis]
Length = 286
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
+ E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 127 EEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNR 186
Query: 79 RAKFRRNERNFISHRNL-DAP 98
RAK+RR E+ +S L D+P
Sbjct: 187 RAKWRRQEKLEVSSMKLQDSP 207
>gi|345496344|ref|XP_001602823.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 522
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 263 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 322
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 323 VWFSNRRAKWRREEK 337
>gi|297275793|ref|XP_002801073.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Macaca mulatta]
gi|402903739|ref|XP_003914716.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Papio anubis]
Length = 230
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 54/77 (70%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+G E K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E R
Sbjct: 57 AEGGSLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVR 116
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+RR ER
Sbjct: 117 VQVWFQNRRAKWRRQER 133
>gi|348512008|ref|XP_003443535.1| PREDICTED: aristaless-related homeobox protein-like [Oreochromis
niloticus]
Length = 466
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 67/111 (60%), Gaps = 13/111 (11%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 200 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 259
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP-PCTNATPLS 114
L+EARVQVWFQNRRAK+R+ E+ + A S P P P PLS
Sbjct: 260 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPSGLPFPGPLAAGHPLS 305
>gi|195470310|ref|XP_002087451.1| GE16946 [Drosophila yakuba]
gi|194173552|gb|EDW87163.1| GE16946 [Drosophila yakuba]
Length = 353
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 61
Query: 84 RNER 87
+ E+
Sbjct: 62 KQEK 65
>gi|170059587|ref|XP_001865428.1| paired box protein [Culex quinquefasciatus]
gi|167878294|gb|EDS41677.1| paired box protein [Culex quinquefasciatus]
Length = 340
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 57/77 (74%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG D D + R K RR+RTTF + QL+ LE+ FE+T YPD F REELA ++ LSEAR
Sbjct: 113 LDGMDGDPNDMGRPRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTREELAMRLDLSEAR 172
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ E+
Sbjct: 173 VQVWFQNRRAKWRKREK 189
>gi|115501611|gb|ABI98853.1| paired box 6 transcript variant 8 [Columba livia]
Length = 380
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 153 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 212
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 213 LPEARIQVWFSNRRAKWRREEK 234
>gi|395856674|ref|XP_003800746.1| PREDICTED: uncharacterized protein LOC100945104 isoform 1 [Otolemur
garnettii]
Length = 279
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|340715062|ref|XP_003396039.1| PREDICTED: paired box protein Pax-6-like [Bombus terrestris]
gi|350414727|ref|XP_003490400.1| PREDICTED: paired box protein Pax-6-like [Bombus impatiens]
Length = 514
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 265 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 324
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 325 VWFSNRRAKWRREEK 339
>gi|293341707|ref|XP_001077800.2| PREDICTED: uncharacterized protein LOC364152 [Rattus norvegicus]
Length = 270
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|332211111|ref|XP_003254659.1| PREDICTED: paired box protein Pax-6 [Nomascus leucogenys]
Length = 458
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 225 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 284
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 285 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 342
Query: 114 SS 115
SS
Sbjct: 343 SS 344
>gi|126310947|ref|XP_001372601.1| PREDICTED: homeobox protein aristaless-like 3-like [Monodelphis
domestica]
Length = 336
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 135 DSMELPKSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 194
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 195 QNRRAKWRKRER 206
>gi|148222787|ref|NP_001079413.1| paired box 6 [Xenopus laevis]
gi|27469846|gb|AAH41712.1| MGC52531 protein [Xenopus laevis]
Length = 453
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 220 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 280 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 337
Query: 114 SS 115
SS
Sbjct: 338 SS 339
>gi|345492062|ref|XP_001601318.2| PREDICTED: paired box protein Pax-6 [Nasonia vitripennis]
Length = 593
Score = 95.9 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G DDD R K K +RNRT+F++ Q++ALEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 255 GADDDQARLRLKRKLQRNRTSFSNEQIDALEKEFERTHYPDVFARERLAGKIGLPEARIQ 314
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 315 VWFSNRRAKWRREEK 329
>gi|195473619|ref|XP_002089090.1| GE26064 [Drosophila yakuba]
gi|194175191|gb|EDW88802.1| GE26064 [Drosophila yakuba]
Length = 420
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWF
Sbjct: 181 DPLDSSMVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWF 240
Query: 76 QNRRAKFRRNERNFISHRNL----DAPTSEQPLPPC 107
QNRRAK R++E H+ +P PL PC
Sbjct: 241 QNRRAKCRKHENQM--HKGFLVGSRSPPIATPLEPC 274
>gi|115501615|gb|ABI98855.1| paired box 6 transcript variant 10 [Columba livia]
Length = 363
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 136 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 195
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 196 LPEARIQVWFSNRRAKWRREEK 217
>gi|195388380|ref|XP_002052858.1| GJ17788 [Drosophila virilis]
gi|194149315|gb|EDW65013.1| GJ17788 [Drosophila virilis]
Length = 378
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 66/115 (57%), Gaps = 13/115 (11%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNERNFI-------SHRNLDAPTSEQPL------PPCTNATPLSSAPPSSSHSFD 125
+ E+ + LD + + T L PP SS+S D
Sbjct: 62 KQEKLGTAGDYKEDAQLELDVAFDDSAVLGQLDSALAGGGTLLPDTPPQSSNSLD 116
>gi|321473819|gb|EFX84785.1| hypothetical protein DAPPUDRAFT_36325 [Daphnia pulex]
Length = 64
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QL LEK F RTHYPD F REELA K+ L+EAR+QVWFQNRRAK+R
Sbjct: 1 KRKQRRYRTTFTSYQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 60
Query: 84 RNER 87
+ E+
Sbjct: 61 KQEK 64
>gi|61189938|gb|AAX39333.1| paired box gene 6 [Ovis aries]
Length = 346
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 135 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 194
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 195 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 252
Query: 114 SS 115
SS
Sbjct: 253 SS 254
>gi|115501607|gb|ABI98851.1| paired box 6 transcript variant 6 [Columba livia]
Length = 394
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 167 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 226
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 227 LPEARIQVWFSNRRAKWRREEK 248
>gi|395535578|ref|XP_003769800.1| PREDICTED: homeobox protein aristaless-like 3 [Sarcophilus
harrisii]
Length = 357
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 56/72 (77%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWF
Sbjct: 156 DSMELPKSKNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWF 215
Query: 76 QNRRAKFRRNER 87
QNRRAK+R+ ER
Sbjct: 216 QNRRAKWRKRER 227
>gi|357614288|gb|EHJ69004.1| paired-like family homeodomain transcription factor [Danaus
plexippus]
Length = 341
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 54/74 (72%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+ DD D K K RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+QV
Sbjct: 113 DSDDPDDFAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQV 172
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+R+ E+
Sbjct: 173 WFQNRRAKWRKQEK 186
>gi|189353|gb|AAA59962.1| oculorhombin [Homo sapiens]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|383859947|ref|XP_003705453.1| PREDICTED: paired box protein Pax-6-like [Megachile rotundata]
Length = 628
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 379 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 438
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 439 VWFSNRRAKWRREEK 453
>gi|348557450|ref|XP_003464532.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Cavia
porcellus]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|62087934|dbj|BAD92414.1| paired box gene 6 isoform a variant [Homo sapiens]
Length = 385
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 152 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 211
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 212 LPEARIQVWFSNRRAKWRREEK 233
>gi|326919723|ref|XP_003206127.1| PREDICTED: paired box protein Pax-6-like [Meleagris gallopavo]
Length = 377
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 150 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 209
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 210 LPEARIQVWFSNRRAKWRREEK 231
>gi|4580424|ref|NP_001595.2| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642911|ref|NP_001245391.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|386642913|ref|NP_001245392.1| paired box protein Pax-6 isoform b [Homo sapiens]
gi|301764208|ref|XP_002917525.1| PREDICTED: paired box protein Pax-6-like [Ailuropoda melanoleuca]
gi|390470364|ref|XP_002755188.2| PREDICTED: paired box protein Pax-6 isoform 1 [Callithrix jacchus]
gi|390470366|ref|XP_003734277.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470368|ref|XP_003734278.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|397520715|ref|XP_003830457.1| PREDICTED: paired box protein Pax-6 isoform 4 [Pan paniscus]
gi|397520717|ref|XP_003830458.1| PREDICTED: paired box protein Pax-6 isoform 5 [Pan paniscus]
gi|397520719|ref|XP_003830459.1| PREDICTED: paired box protein Pax-6 isoform 6 [Pan paniscus]
gi|403254508|ref|XP_003920007.1| PREDICTED: paired box protein Pax-6 isoform 4 [Saimiri boliviensis
boliviensis]
gi|403254510|ref|XP_003920008.1| PREDICTED: paired box protein Pax-6 isoform 5 [Saimiri boliviensis
boliviensis]
gi|403254512|ref|XP_003920009.1| PREDICTED: paired box protein Pax-6 isoform 6 [Saimiri boliviensis
boliviensis]
gi|410973488|ref|XP_003993181.1| PREDICTED: paired box protein Pax-6 isoform 4 [Felis catus]
gi|410973490|ref|XP_003993182.1| PREDICTED: paired box protein Pax-6 isoform 5 [Felis catus]
gi|410973492|ref|XP_003993183.1| PREDICTED: paired box protein Pax-6 isoform 6 [Felis catus]
gi|410973494|ref|XP_003993184.1| PREDICTED: paired box protein Pax-6 isoform 7 [Felis catus]
gi|426367844|ref|XP_004050931.1| PREDICTED: paired box protein Pax-6 isoform 4 [Gorilla gorilla
gorilla]
gi|426367846|ref|XP_004050932.1| PREDICTED: paired box protein Pax-6 isoform 5 [Gorilla gorilla
gorilla]
gi|426367850|ref|XP_004050934.1| PREDICTED: paired box protein Pax-6 isoform 7 [Gorilla gorilla
gorilla]
gi|326205307|dbj|BAJ84032.1| paired box protein Pax-6 [Homo sapiens]
gi|326205309|dbj|BAJ84033.1| paired box protein Pax-6 [Homo sapiens]
gi|326205311|dbj|BAJ84034.1| paired box protein Pax-6 [Homo sapiens]
gi|380813236|gb|AFE78492.1| paired box protein Pax-6 isoform b [Macaca mulatta]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|4633284|gb|AAD26698.1|AF117979_1 homeodomain transcription factor NBPHOX [Homo sapiens]
gi|1841338|dbj|BAA11555.1| NBPhox [Homo sapiens]
gi|5672611|dbj|BAA82670.1| NBPhox [Homo sapiens]
Length = 314
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|129651|sp|P26630.1|PAX6_DANRE RecName: Full=Paired box protein Pax-6; AltName: Full=Pax[Zf-a]
gi|62549|emb|CAA43661.1| Pax[zf-a] [Danio rerio]
gi|44890538|gb|AAH66722.1| Pax6a protein [Danio rerio]
Length = 437
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>gi|344275621|ref|XP_003409610.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein aristaless-like
3-like [Loxodonta africana]
Length = 343
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPGSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLAVRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>gi|157122925|ref|XP_001659959.1| paired box protein, putative [Aedes aegypti]
gi|108882959|gb|EAT47184.1| AAEL001696-PA [Aedes aegypti]
Length = 289
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG D D + R K RR+RTTF + QL+ LE+ FE+T YPD F REELA ++ LSEAR
Sbjct: 80 LDGMDGDPNDMNRPRKIRRSRTTFTTFQLHQLERAFEKTQYPDVFTREELAMRLDLSEAR 139
Query: 71 VQVWFQNRRAKFRRNER-------NFISHRNLDAPTSEQPLP-PCTNATPLSSAPPSSSH 122
VQVWFQNRRAK+R+ E+ F+ H D E PL P + S PP+
Sbjct: 140 VQVWFQNRRAKWRKREKAMGRDTSAFLHH---DQGMPEFPLGLPLPHQLAHPSLPPAEFW 196
Query: 123 SFDFCAMP 130
S +F P
Sbjct: 197 SANFGLHP 204
>gi|440910049|gb|ELR59881.1| Paired box protein Pax-6, partial [Bos grunniens mutus]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|148222721|ref|NP_001091013.1| paired box gene 6 [Canis lupus familiaris]
gi|344281158|ref|XP_003412347.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Loxodonta
africana]
gi|426245242|ref|XP_004016422.1| PREDICTED: paired box protein Pax-6 isoform 5 [Ovis aries]
gi|426245244|ref|XP_004016423.1| PREDICTED: paired box protein Pax-6 isoform 6 [Ovis aries]
gi|426245246|ref|XP_004016424.1| PREDICTED: paired box protein Pax-6 isoform 7 [Ovis aries]
gi|426245248|ref|XP_004016425.1| PREDICTED: paired box protein Pax-6 isoform 8 [Ovis aries]
gi|134289886|gb|ABO70134.1| PAX6 [Canis lupus familiaris]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|228153|prf||1717390A pax gene
Length = 374
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 145 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 204
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 205 LPEARIQVWFSNRRAKWRREEK 226
>gi|44922124|gb|AAS48919.1| paired box 6 isoform 5a [Rattus norvegicus]
gi|44922126|gb|AAS48920.1| paired box 6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|6679401|ref|NP_032914.1| paired mesoderm homeobox protein 2B [Mus musculus]
gi|12707580|ref|NP_003915.2| paired mesoderm homeobox protein 2B [Homo sapiens]
gi|109074098|ref|XP_001098028.1| PREDICTED: paired mesoderm homeobox protein 2B [Macaca mulatta]
gi|114593819|ref|XP_001149518.1| PREDICTED: paired mesoderm homeobox protein 2B [Pan troglodytes]
gi|332219062|ref|XP_003258677.1| PREDICTED: paired mesoderm homeobox protein 2B [Nomascus
leucogenys]
gi|426344195|ref|XP_004038660.1| PREDICTED: paired mesoderm homeobox protein 2B [Gorilla gorilla
gorilla]
gi|6093753|sp|O35690.1|PHX2B_MOUSE RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|116242712|sp|Q99453.2|PHX2B_HUMAN RecName: Full=Paired mesoderm homeobox protein 2B; AltName:
Full=Neuroblastoma Phox; Short=NBPhox; AltName:
Full=PHOX2B homeodomain protein; AltName:
Full=Paired-like homeobox 2B
gi|2632151|emb|CAA74833.1| PHOX2b protein [Mus musculus]
gi|5672613|dbj|BAA82671.1| NBPhox [Mus musculus]
gi|16877955|gb|AAH17199.1| Paired-like homeobox 2b [Homo sapiens]
gi|50927508|gb|AAH79610.1| Paired-like homeobox 2b [Mus musculus]
gi|119613395|gb|EAW92989.1| paired-like homeobox 2b [Homo sapiens]
gi|148705829|gb|EDL37776.1| paired-like homeobox 2b [Mus musculus]
Length = 314
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|392353126|ref|XP_344240.4| PREDICTED: paired mesoderm homeobox protein 2B [Rattus norvegicus]
Length = 301
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|157122935|ref|XP_001659964.1| retinal homeobox protein [Aedes aegypti]
gi|108882964|gb|EAT47189.1| AAEL001689-PA [Aedes aegypti]
Length = 756
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 394 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 453
Query: 84 RNER 87
R E+
Sbjct: 454 RQEK 457
>gi|7305369|ref|NP_038655.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644677|ref|NP_001231127.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|346644705|ref|NP_001231129.1| paired box protein Pax-6 isoform 1 [Mus musculus]
gi|354470765|ref|XP_003497615.1| PREDICTED: paired box protein Pax-6 isoform 2 [Cricetulus griseus]
gi|1405744|emb|CAA45379.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15277449|gb|AAH11272.1| Paired box gene 6 [Mus musculus]
gi|18138034|emb|CAC80519.1| paired box protein [Mus musculus]
gi|148695799|gb|EDL27746.1| paired box gene 6, isoform CRA_b [Mus musculus]
gi|148695802|gb|EDL27749.1| paired box gene 6, isoform CRA_b [Mus musculus]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|402893913|ref|XP_003910125.1| PREDICTED: paired box protein Pax-6 isoform 4 [Papio anubis]
gi|402893915|ref|XP_003910126.1| PREDICTED: paired box protein Pax-6 isoform 5 [Papio anubis]
gi|402893919|ref|XP_003910128.1| PREDICTED: paired box protein Pax-6 isoform 7 [Papio anubis]
gi|402893921|ref|XP_003910129.1| PREDICTED: paired box protein Pax-6 isoform 8 [Papio anubis]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|355752241|gb|EHH56361.1| hypothetical protein EGM_05752, partial [Macaca fascicularis]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|281350934|gb|EFB26518.1| hypothetical protein PANDA_005849 [Ailuropoda melanoleuca]
Length = 434
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 201 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 260
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 261 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 318
Query: 114 SS 115
SS
Sbjct: 319 SS 320
>gi|193786700|dbj|BAG52023.1| unnamed protein product [Homo sapiens]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|2369651|emb|CAA68835.1| PAX-6 protein [Astyanax mexicanus]
gi|2369657|emb|CAA68839.1| PAX-6 protein [Astyanax mexicanus]
gi|50082925|gb|AAT70088.1| Pax6 homeobox protein [Astyanax mexicanus]
Length = 437
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL 104
L EAR+QVWF NRRAK+RR E+ R + TS P+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEKLRNQRRQANNSTSHIPI 306
>gi|386783703|gb|AFJ24746.1| Pax6A [Schmidtea mediterranea]
Length = 564
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E+DD + ++ K +RNRT+F++ QL++LEK FERTHYPD F RE+LA K+ L EAR+QV
Sbjct: 288 ENDDMRIKLKR-KLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQV 346
Query: 74 WFQNRRAKFRRNER 87
WF NRRAK+RR E+
Sbjct: 347 WFSNRRAKWRREEK 360
>gi|355566635|gb|EHH23014.1| hypothetical protein EGK_06384 [Macaca mulatta]
Length = 361
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 144 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 203
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 204 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 261
Query: 114 SS 115
SS
Sbjct: 262 SS 263
>gi|1685047|gb|AAB36681.1| paired-type homeodomain Pax-6 protein [Xenopus laevis]
Length = 453
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 220 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 280 LPEARIQVWFSNRRAKWRREEK 301
>gi|45384210|ref|NP_990397.1| paired box protein Pax-6 [Gallus gallus]
gi|2576237|dbj|BAA23004.1| PAX6 protein [Gallus gallus]
gi|115501595|gb|ABI98845.1| paired box 6 [Columba livia]
gi|115501597|gb|ABI98846.1| paired box 6 transcript variant 1 [Columba livia]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|405972244|gb|EKC37023.1| Retinal homeobox protein Rx [Crassostrea gigas]
Length = 987
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF S QL LE VF+ THYPD +RE++A+KV L+EARVQVWFQNRRAK+R+
Sbjct: 65 KQRRNRTTFTSDQLRELEAVFQHTHYPDCTLREQIAEKVDLTEARVQVWFQNRRAKWRKQ 124
Query: 86 ERNFI 90
E+N +
Sbjct: 125 EKNIV 129
>gi|241681430|ref|XP_002411608.1| paired box protein Pax-6, putative [Ixodes scapularis]
gi|215504348|gb|EEC13842.1| paired box protein Pax-6, putative [Ixodes scapularis]
Length = 433
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+D+ R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 196 GDDEAAARLRLKRKLQRNRTSFSMEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ 255
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSA---PPS 119
VWF NRRAK+RR E+ + + D+ + P P A+PL + PPS
Sbjct: 256 VWFSNRRAKWRREEK--LRSQRRDSGANSPPRPSPGYASPLYPSLHGPPS 303
>gi|2495315|sp|P55864.1|PAX6_XENLA RecName: Full=Paired box protein Pax-6
gi|1685056|gb|AAB36683.1| Pax6 [Xenopus laevis]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSASVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|341903373|gb|EGT59308.1| hypothetical protein CAEBREN_04513 [Caenorhabditis brenneri]
Length = 473
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 73/123 (59%), Gaps = 8/123 (6%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
+ + EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EA
Sbjct: 214 QVEAEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEA 273
Query: 70 RVQVWFQNRRAKFRRNE--RNFISHRNLDAPTSEQ---PLPPCTNATPLS---SAPPSSS 121
R+QVWF NRRAK+RR E RN S +D+ S P P + +S +P S+
Sbjct: 274 RIQVWFSNRRAKWRREEKMRNKRSSGTMDSSLSNGTPTPTPGSVTGSNMSNPIGSPASTP 333
Query: 122 HSF 124
+ F
Sbjct: 334 NRF 336
>gi|306754627|gb|ADN04686.1| Pax6 [Rattus norvegicus]
Length = 434
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|151564048|gb|ABS17534.1| PAX6 [Pseudepidalea raddei]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|327259827|ref|XP_003214737.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Anolis
carolinensis]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|307189169|gb|EFN73617.1| Paired box protein Pax-6 [Camponotus floridanus]
Length = 516
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 265 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 324
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 325 VWFSNRRAKWRREEK 339
>gi|6981334|ref|NP_037133.1| paired box protein Pax-6 [Rattus norvegicus]
gi|51704214|sp|P63016.1|PAX6_RAT RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|1568653|gb|AAB09042.1| paired-box/homeobox protein [Rattus norvegicus]
gi|118764376|gb|AAI28742.1| Paired box 6 [Rattus norvegicus]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|26389393|dbj|BAC25729.1| unnamed protein product [Mus musculus]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|348557448|ref|XP_003464531.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Cavia
porcellus]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|126723718|ref|NP_001075686.1| paired box protein Pax-6 [Oryctolagus cuniculus]
gi|77547037|gb|ABA90485.1| paired box protein PAX6 isoform b [Oryctolagus cuniculus]
Length = 436
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|327259823|ref|XP_003214735.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Anolis
carolinensis]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|73974940|ref|XP_852840.1| PREDICTED: paired mesoderm homeobox protein 2B [Canis lupus
familiaris]
Length = 314
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|395543615|ref|XP_003773712.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Sarcophilus harrisii]
Length = 484
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 251 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 310
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 311 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 368
Query: 114 SS 115
SS
Sbjct: 369 SS 370
>gi|242006165|ref|XP_002423925.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
gi|212507188|gb|EEB11187.1| Paired box protein Pax-6, putative [Pediculus humanus corporis]
Length = 509
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 283 GDEDSQLRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 342
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 343 VWFSNRRAKWRREEK 357
>gi|161076856|ref|NP_001097140.1| CG34367, isoform C [Drosophila melanogaster]
gi|157400139|gb|ABV53663.1| CG34367, isoform C [Drosophila melanogaster]
Length = 420
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWF
Sbjct: 181 DPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWF 240
Query: 76 QNRRAKFRRNERNFISHRNL----DAPTSEQPLPPC 107
QNRRAK R++E H+ +P PL PC
Sbjct: 241 QNRRAKCRKHENQM--HKGFLVGSRSPPIATPLEPC 274
>gi|55742272|ref|NP_001006763.1| paired box 6 [Xenopus (Silurana) tropicalis]
gi|49522632|gb|AAH75551.1| paired box 6 [Xenopus (Silurana) tropicalis]
Length = 424
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 191 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 250
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 251 LPEARIQVWFSNRRAKWRREEK 272
>gi|5758935|gb|AAD50901.1|AF169412_1 paired-box transcription factor ++ isoform, partial [Ambystoma
mexicanum]
Length = 433
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 201 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 260
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 261 LPEARIQVWFSNRRAKWRREEK 282
>gi|77547035|gb|ABA90484.1| paired box protein PAX6 isoform a [Oryctolagus cuniculus]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|383296|prf||1902328A PAX6 gene
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|297475806|ref|XP_002688259.1| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
gi|296486633|tpg|DAA28746.1| TPA: paired-like homeobox 2b-like [Bos taurus]
Length = 315
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|296196663|ref|XP_002745937.1| PREDICTED: paired mesoderm homeobox protein 2B [Callithrix jacchus]
Length = 314
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|4505615|ref|NP_000271.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|189083681|ref|NP_001121084.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|346644712|ref|NP_001231130.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644716|ref|NP_001231131.1| paired box protein Pax-6 isoform 2 [Mus musculus]
gi|346644858|ref|NP_001231101.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|346644860|ref|NP_001231102.1| paired box protein Pax-6 isoform 1 [Sus scrofa]
gi|386642915|ref|NP_001245393.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|386642917|ref|NP_001245394.1| paired box protein Pax-6 isoform a [Homo sapiens]
gi|388452718|ref|NP_001253186.1| paired box protein Pax-6 [Macaca mulatta]
gi|354470763|ref|XP_003497614.1| PREDICTED: paired box protein Pax-6 isoform 1 [Cricetulus griseus]
gi|390470358|ref|XP_003734275.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|390470360|ref|XP_002755189.2| PREDICTED: paired box protein Pax-6 isoform 2 [Callithrix jacchus]
gi|390470362|ref|XP_003734276.1| PREDICTED: paired box protein Pax-6 [Callithrix jacchus]
gi|395815485|ref|XP_003781257.1| PREDICTED: paired box protein Pax-6 [Otolemur garnettii]
gi|397520709|ref|XP_003830454.1| PREDICTED: paired box protein Pax-6 isoform 1 [Pan paniscus]
gi|397520711|ref|XP_003830455.1| PREDICTED: paired box protein Pax-6 isoform 2 [Pan paniscus]
gi|397520713|ref|XP_003830456.1| PREDICTED: paired box protein Pax-6 isoform 3 [Pan paniscus]
gi|403254502|ref|XP_003920004.1| PREDICTED: paired box protein Pax-6 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403254504|ref|XP_003920005.1| PREDICTED: paired box protein Pax-6 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403254506|ref|XP_003920006.1| PREDICTED: paired box protein Pax-6 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410973482|ref|XP_003993178.1| PREDICTED: paired box protein Pax-6 isoform 1 [Felis catus]
gi|410973484|ref|XP_003993179.1| PREDICTED: paired box protein Pax-6 isoform 2 [Felis catus]
gi|410973486|ref|XP_003993180.1| PREDICTED: paired box protein Pax-6 isoform 3 [Felis catus]
gi|426367838|ref|XP_004050928.1| PREDICTED: paired box protein Pax-6 isoform 1 [Gorilla gorilla
gorilla]
gi|426367840|ref|XP_004050929.1| PREDICTED: paired box protein Pax-6 isoform 2 [Gorilla gorilla
gorilla]
gi|426367842|ref|XP_004050930.1| PREDICTED: paired box protein Pax-6 isoform 3 [Gorilla gorilla
gorilla]
gi|426367848|ref|XP_004050933.1| PREDICTED: paired box protein Pax-6 isoform 6 [Gorilla gorilla
gorilla]
gi|6174889|sp|P26367.2|PAX6_HUMAN RecName: Full=Paired box protein Pax-6; AltName: Full=Aniridia type
II protein; AltName: Full=Oculorhombin
gi|51702790|sp|P63015.1|PAX6_MOUSE RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|189633|gb|AAA36416.1| paired-box protein [Homo sapiens]
gi|1405745|emb|CAA45380.1| Pax-6 (paired box containing gene) [Mus musculus]
gi|15080397|gb|AAH11953.1| Paired box 6 [Homo sapiens]
gi|15422113|gb|AAK95849.1| paired box protein PAX6 [Homo sapiens]
gi|22477504|gb|AAH36957.1| Pax6 protein [Mus musculus]
gi|51872083|gb|AAU12168.1| paired box gene 6 isoform a [Homo sapiens]
gi|90076866|dbj|BAE88113.1| unnamed protein product [Macaca fascicularis]
gi|123981066|gb|ABM82362.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|123995873|gb|ABM85538.1| paired box gene 6 (aniridia, keratitis) [synthetic construct]
gi|148695798|gb|EDL27745.1| paired box gene 6, isoform CRA_a [Mus musculus]
gi|261860050|dbj|BAI46547.1| paired box 6 [synthetic construct]
gi|380813234|gb|AFE78491.1| paired box protein Pax-6 isoform a [Macaca mulatta]
Length = 422
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|99028934|ref|NP_001035735.1| paired box protein Pax-6 [Bos taurus]
gi|344281156|ref|XP_003412346.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Loxodonta
africana]
gi|426245234|ref|XP_004016418.1| PREDICTED: paired box protein Pax-6 isoform 1 [Ovis aries]
gi|426245236|ref|XP_004016419.1| PREDICTED: paired box protein Pax-6 isoform 2 [Ovis aries]
gi|426245238|ref|XP_004016420.1| PREDICTED: paired box protein Pax-6 isoform 3 [Ovis aries]
gi|426245240|ref|XP_004016421.1| PREDICTED: paired box protein Pax-6 isoform 4 [Ovis aries]
gi|119390857|sp|Q1LZF1.1|PAX6_BOVIN RecName: Full=Paired box protein Pax-6; AltName: Full=Oculorhombin
gi|94534889|gb|AAI16039.1| Paired box 6 [Bos taurus]
gi|296479736|tpg|DAA21851.1| TPA: paired box protein Pax-6 [Bos taurus]
Length = 422
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|402893907|ref|XP_003910122.1| PREDICTED: paired box protein Pax-6 isoform 1 [Papio anubis]
gi|402893909|ref|XP_003910123.1| PREDICTED: paired box protein Pax-6 isoform 2 [Papio anubis]
gi|402893911|ref|XP_003910124.1| PREDICTED: paired box protein Pax-6 isoform 3 [Papio anubis]
gi|402893917|ref|XP_003910127.1| PREDICTED: paired box protein Pax-6 isoform 6 [Papio anubis]
Length = 422
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|295389208|gb|ADG03434.1| homeobrain [Nematostella vectensis]
Length = 294
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 8 TLRCDGEDDDYDYERRKP-KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
++ DG ++ E KP K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ L
Sbjct: 80 VMKDDGSGEESAGEDGKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDL 139
Query: 67 SEARVQVWFQNRRAKFRRNERNF 89
SEARVQVWFQNRRAK+R+ E+
Sbjct: 140 SEARVQVWFQNRRAKWRKREKAL 162
>gi|260792042|ref|XP_002591036.1| paired box protein 6 [Branchiostoma floridae]
gi|229276236|gb|EEN47047.1| paired box protein 6 [Branchiostoma floridae]
Length = 981
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 4/80 (5%)
Query: 12 DGEDDDYDYE----RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
DG +DD D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L
Sbjct: 729 DGSNDDSDEAQARLRLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLP 788
Query: 68 EARVQVWFQNRRAKFRRNER 87
EAR+QVWF NRRAK+RR E+
Sbjct: 789 EARIQVWFSNRRAKWRREEK 808
>gi|149022829|gb|EDL79723.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
gi|149022831|gb|EDL79725.1| paired box gene 6, isoform CRA_c [Rattus norvegicus]
Length = 470
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 237 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 296
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 297 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 354
Query: 114 SS 115
SS
Sbjct: 355 SS 356
>gi|8132383|gb|AAF73271.1|AF154555_1 paired domain transcription factor variant A [Xenopus laevis]
gi|8132385|gb|AAF73272.1|AF154556_1 paired domain transcription factor variant A [Xenopus laevis]
Length = 422
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|2696971|dbj|BAA24024.1| PAX6 LL [Cynops pyrrhogaster]
Length = 452
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 220 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 280 LPEARIQVWFSNRRAKWRREEK 301
>gi|42592306|emb|CAF29075.1| putative pax6 isoform 5a [Rattus norvegicus]
Length = 436
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|34364871|emb|CAE45868.1| hypothetical protein [Homo sapiens]
Length = 436
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|149022827|gb|EDL79721.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
gi|149022830|gb|EDL79724.1| paired box gene 6, isoform CRA_a [Rattus norvegicus]
Length = 456
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 223 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 282
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 283 LPEARIQVWFSNRRAKWRREEK 304
>gi|115501601|gb|ABI98848.1| paired box 6 transcript variant 3 [Columba livia]
Length = 422
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|18859209|ref|NP_571379.1| paired box protein Pax-6 [Danio rerio]
gi|62547|emb|CAA44867.1| pax-6 [Danio rerio]
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 222 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 281
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 282 LPEARIQVWFSNRRAKWRREEK 303
>gi|148695801|gb|EDL27748.1| paired box gene 6, isoform CRA_d [Mus musculus]
Length = 499
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 266 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 325
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 326 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 383
Query: 114 SS 115
SS
Sbjct: 384 SS 385
>gi|5758939|gb|AAD50903.1|AF169414_1 paired-box transcription factor -+ isoform, partial [Ambystoma
mexicanum]
Length = 419
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 187 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 246
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 247 LPEARIQVWFSNRRAKWRREEK 268
>gi|410923991|ref|XP_003975465.1| PREDICTED: LOW QUALITY PROTEIN: retinal homeobox protein Rx2-like
[Takifugu rubripes]
Length = 358
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 162 EHNKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRA 221
Query: 81 KFRRNER 87
K+RR E+
Sbjct: 222 KWRRQEK 228
>gi|18858285|ref|NP_571459.1| aristaless-related homeobox protein [Danio rerio]
gi|18202032|sp|O42115.1|ARX_DANRE RecName: Full=Aristaless-related homeobox protein; Short=ARX
gi|2317261|dbj|BAA21764.1| Arx homeoprotein [Danio rerio]
gi|190337749|gb|AAI63865.1| Aristaless related homeobox [Danio rerio]
gi|190337753|gb|AAI63872.1| Aristaless related homeobox [Danio rerio]
Length = 453
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 13/111 (11%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 193 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 252
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP-PCTNATPLS 114
L+EARVQVWFQNRRAK+R+ E+ + A + P P P A PLS
Sbjct: 253 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPTGLPFPGPLAAAHPLS 298
>gi|1488322|gb|AAB05932.1| Xpax6 [Xenopus laevis]
Length = 422
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|18859211|ref|NP_571716.1| paired box gene 6b [Danio rerio]
gi|3779238|gb|AAC96095.1| Pax-family transcription factor 6.2 [Danio rerio]
Length = 437
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>gi|328714903|ref|XP_001946558.2| PREDICTED: short stature homeobox protein 2-like [Acyrthosiphon
pisum]
Length = 330
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 68/102 (66%), Gaps = 11/102 (10%)
Query: 12 DGEDDDYDYERRKP--KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
DG ++ + P K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 132 DGSKNNNSKQLNGPSNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 191
Query: 70 RVQVWFQNRRAKFRRNE----RNFISHRNLDAPTSEQPLPPC 107
RVQVWFQNRRAK R++E + + H+N+ PL PC
Sbjct: 192 RVQVWFQNRRAKCRKHESQMHKGLMMHQNVST-----PLEPC 228
>gi|124054606|gb|ABM89504.1| Phox2b [Scyliorhinus canicula]
Length = 230
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 57/86 (66%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 51 DHGGINEKRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 110
Query: 77 NRRAKFRRNERNFISHRNLDAPTSEQ 102
NRRAKFR+ ER S N P ++
Sbjct: 111 NRRAKFRKQERAANSKGNSSNPPGKK 136
>gi|119588639|gb|EAW68233.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
gi|119588640|gb|EAW68234.1| paired box gene 6 (aniridia, keratitis), isoform CRA_a [Homo
sapiens]
Length = 456
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 223 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 282
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 283 LPEARIQVWFSNRRAKWRREEK 304
>gi|1352720|sp|P47238.1|PAX6_COTJA RecName: Full=Paired box protein Pax-6; AltName: Full=Pax-QNR
gi|481053|pir||S37689 paired box transcription factor Pax-6 - quail
gi|311772|emb|CAA49899.1| paired box and homeobox [Coturnix coturnix]
gi|115501603|gb|ABI98849.1| paired box 6 transcript variant 4 [Columba livia]
Length = 416
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|440891870|gb|ELR45335.1| Paired mesoderm homeobox protein 2B, partial [Bos grunniens mutus]
Length = 212
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 154
Query: 84 RNER 87
+ ER
Sbjct: 155 KQER 158
>gi|348528190|ref|XP_003451601.1| PREDICTED: short stature homeobox protein-like isoform 2
[Oreochromis niloticus]
Length = 293
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 70/129 (54%), Gaps = 11/129 (8%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 97 EDEDA---QGKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 153
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPC-----TNATPLSSAPPSSSHSFDFCA 128
WFQNRRAK R+ E H+ + S PL C N L H F F
Sbjct: 154 WFQNRRAKCRKQENQM--HKGV-ILGSGSPLDACRVAPYVNMGALRMPFQQVGHVFIFVV 210
Query: 129 MPHSQCNST 137
Q
Sbjct: 211 QAQLQLEGV 219
>gi|332022174|gb|EGI62491.1| Paired box protein Pax-6 [Acromyrmex echinatior]
Length = 631
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 380 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 439
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 440 VWFSNRRAKWRREEK 454
>gi|115501599|gb|ABI98847.1| paired box 6 transcript variant 2 [Columba livia]
Length = 430
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|194667831|ref|XP_001252231.2| PREDICTED: paired mesoderm homeobox protein 2B [Bos taurus]
Length = 314
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|432866185|ref|XP_004070727.1| PREDICTED: homeobox protein aristaless-like 3-like [Oryzias
latipes]
Length = 369
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 8 TLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
+L+ D D D + K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+
Sbjct: 152 SLQGDSIADSIDLSGKNKK-RRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELT 210
Query: 68 EARVQVWFQNRRAKFRRNER 87
EARVQVWFQNRRAK+R+ ER
Sbjct: 211 EARVQVWFQNRRAKWRKRER 230
>gi|410903484|ref|XP_003965223.1| PREDICTED: retinal homeobox protein Rx3-like [Takifugu rubripes]
Length = 301
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 101 DDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 160
Query: 79 RAKFRRNERNFISHRNL 95
RAK+RR E+ +S L
Sbjct: 161 RAKWRRQEKLEVSSIKL 177
>gi|170588511|ref|XP_001899017.1| Homeobox domain containing protein [Brugia malayi]
gi|158593230|gb|EDP31825.1| Homeobox domain containing protein [Brugia malayi]
Length = 243
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D ++D R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 15 DPDEDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARI 74
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 75 QVWFSNRRAKWRREEK 90
>gi|402590573|gb|EJW84503.1| homeobox domain-containing protein, partial [Wuchereria
bancrofti]
Length = 234
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D ++D R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 8 DPDEDTAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARI 67
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 68 QVWFSNRRAKWRREEK 83
>gi|327259835|ref|XP_003214741.1| PREDICTED: paired box protein Pax-6-like isoform 7 [Anolis
carolinensis]
Length = 430
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|2369654|emb|CAA68837.1| PAX-6 protein [Astyanax mexicanus]
Length = 433
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 204 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 263
Query: 66 LSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL 104
L EAR+QVWF NRRAK+RR E+ R + TS P+
Sbjct: 264 LPEARIQVWFSNRRAKWRREEKLRNQRRQANNSTSHIPI 302
>gi|119588642|gb|EAW68236.1| paired box gene 6 (aniridia, keratitis), isoform CRA_c [Homo
sapiens]
Length = 470
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 237 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 296
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 297 LPEARIQVWFSNRRAKWRREEK 318
>gi|194859821|ref|XP_001969458.1| GG23943 [Drosophila erecta]
gi|190661325|gb|EDV58517.1| GG23943 [Drosophila erecta]
Length = 419
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWF
Sbjct: 181 DPLDSSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWF 240
Query: 76 QNRRAKFRRNERNFISHRNL----DAPTSEQPLPPC 107
QNRRAK R++E H+ +P PL PC
Sbjct: 241 QNRRAKCRKHENQM--HKGFLVGSRSPPIATPLEPC 274
>gi|2369655|emb|CAA68838.1| PAX-6 protein [Astyanax mexicanus]
Length = 459
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 230 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 289
Query: 66 LSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL 104
L EAR+QVWF NRRAK+RR E+ R + TS P+
Sbjct: 290 LPEARIQVWFSNRRAKWRREEKLRNQRRQANNSTSHIPI 328
>gi|344245472|gb|EGW01576.1| Paired box protein Pax-6 [Cricetulus griseus]
Length = 544
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 285 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 344
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 345 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 402
Query: 114 SS 115
SS
Sbjct: 403 SS 404
>gi|340726685|ref|XP_003401684.1| PREDICTED: hypothetical protein LOC100649005 [Bombus terrestris]
Length = 314
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
+D K K RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWFQ
Sbjct: 128 GHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 187
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 188 NRRAKFRKQER 198
>gi|133778704|gb|AAI33878.1| Arx protein [Danio rerio]
Length = 382
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 13/111 (11%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 193 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 252
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP-PCTNATPLS 114
L+EARVQVWFQNRRAK+R+ E+ + A + P P P A PLS
Sbjct: 253 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPTGLPFPGPLAAAHPLS 298
>gi|2369653|emb|CAA68836.1| PAX-6 protein [Astyanax mexicanus]
Length = 441
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 2/99 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 212 SISSNGEDSEEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 271
Query: 66 LSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL 104
L EAR+QVWF NRRAK+RR E+ R + TS P+
Sbjct: 272 LPEARIQVWFSNRRAKWRREEKLRNQRRQANNSTSHIPI 310
>gi|410957796|ref|XP_003985510.1| PREDICTED: paired mesoderm homeobox protein 2B [Felis catus]
Length = 232
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|432892481|ref|XP_004075802.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oryzias
latipes]
Length = 299
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 148
Query: 84 RNER 87
+ ER
Sbjct: 149 KQER 152
>gi|281364781|ref|NP_001162934.1| CG34367, isoform B [Drosophila melanogaster]
gi|124248424|gb|ABM92832.1| IP17602p [Drosophila melanogaster]
gi|272406982|gb|AAF52920.2| CG34367, isoform B [Drosophila melanogaster]
Length = 297
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D D K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWF
Sbjct: 58 DPLDTSLVNTKQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWF 117
Query: 76 QNRRAKFRRNERNFISHRNL----DAPTSEQPLPPC 107
QNRRAK R++E H+ +P PL PC
Sbjct: 118 QNRRAKCRKHENQM--HKGFLVGSRSPPIATPLEPC 151
>gi|348514896|ref|XP_003444976.1| PREDICTED: hypothetical protein LOC100711376 [Oreochromis
niloticus]
Length = 556
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L+ D D D + K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+E
Sbjct: 336 LQGDSIADSIDLSGKNKK-RRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTE 394
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R+ ER
Sbjct: 395 ARVQVWFQNRRAKWRKRER 413
>gi|348523389|ref|XP_003449206.1| PREDICTED: ALX homeobox protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 318
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 104 DDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARV 163
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 164 QVWFQNRRAKWRKRER 179
>gi|269200156|gb|ACZ28705.1| paired box protein 6 isoform c [Homo sapiens]
Length = 401
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|47228761|emb|CAG07493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 225
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 10 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWR 69
Query: 84 RNER--NFISHRNLDAPTSEQPLPPCTNAT 111
+ ER RN A LPP T+ +
Sbjct: 70 KRERYGKIQEVRNHFATYDISLLPPMTHTS 99
>gi|109122933|ref|XP_001100945.1| PREDICTED: retina and anterior neural fold homeobox protein
2-like isoform 1 [Macaca mulatta]
gi|355702984|gb|EHH29475.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
mulatta]
gi|355755326|gb|EHH59073.1| Retina and anterior neural fold homeobox-like protein 1 [Macaca
fascicularis]
Length = 184
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 54/77 (70%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+G E K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E R
Sbjct: 11 AEGGSLGPGEEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVR 70
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+RR ER
Sbjct: 71 VQVWFQNRRAKWRRQER 87
>gi|195437558|ref|XP_002066707.1| GK24418 [Drosophila willistoni]
gi|194162792|gb|EDW77693.1| GK24418 [Drosophila willistoni]
Length = 364
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTFN+ QL LE+ F+RTHYPD F REELA ++ L+EARVQVWFQNRRAK+R
Sbjct: 2 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIELTEARVQVWFQNRRAKWR 61
Query: 84 RNER 87
+ E+
Sbjct: 62 KQEK 65
>gi|301772146|ref|XP_002921493.1| PREDICTED: paired mesoderm homeobox protein 2B-like, partial
[Ailuropoda melanoleuca]
gi|281351965|gb|EFB27549.1| hypothetical protein PANDA_010383 [Ailuropoda melanoleuca]
Length = 193
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 154
Query: 84 RNER 87
+ ER
Sbjct: 155 KQER 158
>gi|194770706|ref|XP_001967430.1| GF21877 [Drosophila ananassae]
gi|190618406|gb|EDV33930.1| GF21877 [Drosophila ananassae]
Length = 545
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
CD +D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR
Sbjct: 251 CD--EDSQMRLRLKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLADKIGLPEAR 308
Query: 71 VQVWFQNRRAKFRRNERNFISHRNLD 96
+QVWF NRRAK+RR E+ R++D
Sbjct: 309 IQVWFSNRRAKWRREEKMRTQRRSVD 334
>gi|156386935|ref|XP_001634166.1| predicted protein [Nematostella vectensis]
gi|156221246|gb|EDO42103.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Query: 9 LRCDGEDDDYDYERRKP-KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
++ DG ++ E KP K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ LS
Sbjct: 1 MKDDGSGEESAGEDGKPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLS 60
Query: 68 EARVQVWFQNRRAKFRRNERNF 89
EARVQVWFQNRRAK+R+ E+
Sbjct: 61 EARVQVWFQNRRAKWRKREKAL 82
>gi|260791956|ref|XP_002590993.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229276193|gb|EEN47004.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 320
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL +E+VF++THYPD ++RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 116 KKKKRRNRTTFTSFQLEEMERVFQKTHYPDVYMREQLALRADLTEARVQVWFQNRRAKWR 175
Query: 84 RNER 87
+ ER
Sbjct: 176 KKER 179
>gi|391341560|ref|XP_003745097.1| PREDICTED: retinal homeobox protein Rx1-like [Metaseiulus
occidentalis]
Length = 245
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+RR
Sbjct: 56 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWRRQ 115
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQCNSTCTFTSP 143
E+ I + + PP T P +P HS A P + T P
Sbjct: 116 EK--IESGGNCSESGSFARPPATQIYPTLGSPDWIRHSIIGNAPPSHALLAAAAVTPP 171
>gi|307211180|gb|EFN87393.1| Paired box protein Pax-6 [Harpegnathos saltator]
Length = 506
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 58/75 (77%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F++ Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 258 GDEDSQVRLRLKRKLQRNRTSFSNEQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 317
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 318 VWFSNRRAKWRREEK 332
>gi|328785265|ref|XP_001119852.2| PREDICTED: hypothetical protein LOC724120 [Apis mellifera]
Length = 523
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 176 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 230
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 231 ARVQVWFQNRRAKWRKSER 249
>gi|348523387|ref|XP_003449205.1| PREDICTED: ALX homeobox protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 323
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 109 DDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARV 168
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 169 QVWFQNRRAKWRKRER 184
>gi|390361068|ref|XP_003729834.1| PREDICTED: dorsal root ganglia homeobox protein-like
[Strongylocentrotus purpuratus]
Length = 347
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D D + RRK RRNRTTF QL LE F +THYPD F RE+LA ++ L+EARVQ
Sbjct: 42 GGDLDETFARRKQ--RRNRTTFTVQQLEELESAFAKTHYPDVFTREDLALRINLTEARVQ 99
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 100 VWFQNRRAKWRKAER 114
>gi|405951906|gb|EKC19775.1| Dorsal root ganglia homeobox protein [Crassostrea gigas]
Length = 492
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 62/90 (68%), Gaps = 5/90 (5%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L D +DD++ RRK RRNRTTF QL LEK F +THYPD F RE+LA ++ L+E
Sbjct: 84 LGSDFQDDNF--ARRKQ--RRNRTTFTLQQLEELEKAFAQTHYPDVFTREDLAMRINLTE 139
Query: 69 ARVQVWFQNRRAKFRRNERNFISHRNLDAP 98
ARVQVWFQNRRAK+R++ER F AP
Sbjct: 140 ARVQVWFQNRRAKWRKSER-FTQQSKSGAP 168
>gi|328705901|ref|XP_003242937.1| PREDICTED: hypothetical protein LOC100570786 [Acyrthosiphon pisum]
Length = 400
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + REE+AK + L+EARVQVWFQNRRAKFR
Sbjct: 145 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAKHIELTEARVQVWFQNRRAKFR 204
Query: 84 RNER 87
+ ER
Sbjct: 205 KQER 208
>gi|72044362|ref|XP_782307.1| PREDICTED: uncharacterized protein LOC576952 [Strongylocentrotus
purpuratus]
Length = 528
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D + D + E +K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 252 MDEMEADENGEPKK-KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVR 310
Query: 71 VQVWFQNRRAKFRRNERNFISHRNLDAPTSEQP 103
VQVWFQNRRAK+RR E+ S L +S P
Sbjct: 311 VQVWFQNRRAKWRRQEKMEASTLKLKDSSSSLP 343
>gi|383854434|ref|XP_003702726.1| PREDICTED: uncharacterized protein LOC100883470 [Megachile
rotundata]
Length = 313
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
+D K K RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWFQ
Sbjct: 128 GHDGLAEKRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQ 187
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 188 NRRAKFRKQER 198
>gi|348523580|ref|XP_003449301.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Oreochromis
niloticus]
Length = 301
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 148
Query: 84 RNER 87
+ ER
Sbjct: 149 KQER 152
>gi|432857453|ref|XP_004068688.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oryzias
latipes]
Length = 508
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDDDYDYERR-----KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D + K K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 193 DGILGDKCNRTDDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 252
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 253 ELAQRTKLTEARVQVWFSNRRARWRK 278
>gi|334331633|ref|XP_001368528.2| PREDICTED: paired box protein Pax-6 isoform 1 [Monodelphis
domestica]
Length = 553
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 320 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 379
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 380 LPEARIQVWFSNRRAKWRREEK 401
>gi|156547635|ref|XP_001603937.1| PREDICTED: retinal homeobox protein Rx-A-like [Nasonia vitripennis]
Length = 306
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 23 RKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKF 82
+K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+
Sbjct: 86 KKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAIKVQLPEVRVQVWFQNRRAKW 145
Query: 83 RRNER 87
RR E+
Sbjct: 146 RRQEK 150
>gi|390351642|ref|XP_797654.3| PREDICTED: uncharacterized protein LOC593067 [Strongylocentrotus
purpuratus]
Length = 392
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LEK F THYPD + REELA K L+EARVQVWFQNRR
Sbjct: 108 HEKRKQ--RRIRTTFTSAQLKELEKAFNETHYPDIYKREELALKTDLTEARVQVWFQNRR 165
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 166 AKFRKTER 173
>gi|8132381|gb|AAF73270.1| paired domain transcription factor variant B [Xenopus laevis]
Length = 390
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|291385705|ref|XP_002709324.1| PREDICTED: paired-like homeobox 2b [Oryctolagus cuniculus]
Length = 250
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 154
Query: 84 RNER 87
+ ER
Sbjct: 155 KQER 158
>gi|18138028|emb|CAC80516.1| paired box protein [Mus musculus]
Length = 436
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 263 LPEARIQVWFPNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 320
Query: 114 SS 115
SS
Sbjct: 321 SS 322
>gi|345305654|ref|XP_003428362.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6-like
[Ornithorhynchus anatinus]
Length = 704
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 471 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 530
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 531 LPEARIQVWFSNRRAKWRREEK 552
>gi|171544937|ref|NP_001116385.1| aristaless-related homeobox protein [Oryzias latipes]
gi|157410507|gb|ABV53977.1| aristaless-related homeobox protein [Oryzias latipes]
Length = 464
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 59/86 (68%), Gaps = 7/86 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 200 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 259
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFI 90
L+EARVQVWFQNRRAK+R+ E+ +
Sbjct: 260 DLTEARVQVWFQNRRAKWRKREKAGV 285
>gi|432918406|ref|XP_004079609.1| PREDICTED: ALX homeobox protein 1-like [Oryzias latipes]
Length = 326
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 109 DDMGDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARV 168
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 169 QVWFQNRRAKWRKRER 184
>gi|338727409|ref|XP_001918200.2| PREDICTED: paired box protein Pax-6 [Equus caballus]
Length = 395
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 162 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 221
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 222 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 279
Query: 114 SS 115
SS
Sbjct: 280 SS 281
>gi|242009922|ref|XP_002425731.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
gi|212509632|gb|EEB12993.1| Homeobox protein orthopedia, putative [Pediculus humanus corporis]
Length = 293
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 55/73 (75%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 41 EDDQARLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 100
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 101 FSNRRAKWRREEK 113
>gi|383857829|ref|XP_003704406.1| PREDICTED: uncharacterized protein LOC100876054 [Megachile
rotundata]
Length = 503
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 163 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 217
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 218 ARVQVWFQNRRAKWRKSER 236
>gi|295656520|gb|ADG26723.1| ARX homeobox protein [Platynereis dumerilii]
Length = 283
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
DG D D D E K K RR RTTF S QL LE+ F++THYPD F REELA ++ L+EAR
Sbjct: 185 SDG-DGDLD-EMGKRKQRRYRTTFTSFQLEELERAFQKTHYPDVFTREELAMRINLTEAR 242
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ E+
Sbjct: 243 VQVWFQNRRAKWRKKEK 259
>gi|288557282|ref|NP_001165666.1| paired box protein Pax-6 [Xenopus laevis]
gi|8132379|gb|AAF73269.1|AF154553_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|291231892|ref|XP_002735897.1| PREDICTED: aristaless homeodomain transcription factor-like
[Saccoglossus kowalevskii]
Length = 236
Score = 94.7 bits (234), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL+ +EKVF+RTHYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 102 KRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNRRAKWR 161
Query: 84 RNER 87
+ ER
Sbjct: 162 KRER 165
>gi|1527205|gb|AAB07733.1| XLPAX6 [Xenopus laevis]
Length = 407
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|3021452|emb|CAA75669.1| prdl-b protein [Hydra vulgaris]
Length = 228
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRR 84
K RR RTTF +HQL+ LE+VF RTHYPD F+REE+A K+ L+EAR+QVWFQNRRAK+R+
Sbjct: 146 KKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQNRRAKWRK 204
>gi|8132377|gb|AAF73268.1|AF154552_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|17227115|gb|AAL38015.1| PAX6 [Mus musculus]
Length = 352
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 169 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 228
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 229 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 286
Query: 114 SS 115
SS
Sbjct: 287 SS 288
>gi|8132387|gb|AAF73273.1|AF154557_1 paired domain transcription factor variant B [Xenopus laevis]
Length = 393
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|357630890|gb|EHJ78711.1| twin of eyeless [Danaus plexippus]
Length = 409
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+++LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 211 GDEDSQMRLRLKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAEKIGLPEARIQ 270
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 271 VWFSNRRAKWRREEK 285
>gi|393911231|gb|EJD76222.1| hypothetical protein LOAG_16789 [Loa loa]
Length = 242
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 8/117 (6%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D + +R K RRNRTTF + QL+ LE+ FER HYPD + RE LA+KV L E RVQVW
Sbjct: 60 DGNKRRDRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELLAQKVKLPEVRVQVW 119
Query: 75 FQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPH 131
FQNRRAK+RR ++ ++ LPP ++TP + +H DF + H
Sbjct: 120 FQNRRAKWRRQDKA--------ESSAIADLPPVRHSTPGIPSWAWMTHPDDFSGLMH 168
>gi|449485972|ref|XP_004175263.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A, partial [Taeniopygia guttata]
Length = 221
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR+
Sbjct: 33 KQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQ 92
Query: 86 ER 87
ER
Sbjct: 93 ER 94
>gi|46309511|ref|NP_996953.1| paired mesoderm homeobox protein 2A [Danio rerio]
gi|42542899|gb|AAH66448.1| Paired-like homeobox 2a [Danio rerio]
Length = 277
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 86 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 145
Query: 84 RNER 87
+ ER
Sbjct: 146 KQER 149
>gi|307180596|gb|EFN68551.1| Segmentation protein paired [Camponotus floridanus]
Length = 516
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR+RTTF +HQL+ LE+ FERT YPD + REELA++ LSEAR+QVWF NRRA+ R
Sbjct: 211 KRKQRRSRTTFTAHQLDELERAFERTQYPDIYTREELAQRTRLSEARIQVWFSNRRARLR 270
Query: 84 RNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDF-CAMPHSQCNSTCTFTS 142
++ ++ +S P PP SSAPP H PH Q S F S
Sbjct: 271 KH----LASSTSGYVSSVYPAPPYVIP---SSAPPHPHHGATVPPGHPHGQSLSDAAFAS 323
>gi|195172576|ref|XP_002027073.1| ey [Drosophila persimilis]
gi|194112851|gb|EDW34894.1| ey [Drosophila persimilis]
Length = 896
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 457 EDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 516
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 517 FSNRRAKWRREEK 529
>gi|405961985|gb|EKC27709.1| Homeobox protein ARX [Crassostrea gigas]
Length = 442
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 74/119 (62%), Gaps = 10/119 (8%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
DG D+ + + RK RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ LSEARV
Sbjct: 97 DGSDESFSSKPRKI--RRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEARV 154
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMP 130
QVWFQNRRAK+R+ E+ ++P Q +A+ L P H+ +F + P
Sbjct: 155 QVWFQNRRAKWRKREKAM----GRESPNFLQ----SDSASGLGDVAPHIPHAVNFPSTP 205
>gi|395831671|ref|XP_003788918.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Otolemur garnettii]
Length = 184
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/79 (59%), Positives = 55/79 (69%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L +G E K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E
Sbjct: 9 LAPEGGGLGPGDEAPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPE 68
Query: 69 ARVQVWFQNRRAKFRRNER 87
RVQVWFQNRRAK+RR ER
Sbjct: 69 VRVQVWFQNRRAKWRRQER 87
>gi|260178655|gb|ACX34050.1| paired box transcription factor 7 isoform 1 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 502
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDDDYDYERR-----KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D + K K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 187 DGILGDKCNRTDDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 247 ELAQRTKLTEARVQVWFSNRRARWRK 272
>gi|410909774|ref|XP_003968365.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Takifugu
rubripes]
Length = 299
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 148
Query: 84 RNER 87
+ ER
Sbjct: 149 KQER 152
>gi|260178657|gb|ACX34051.1| paired box transcription factor 7 isoform 2 [Maylandia sp. 'Kompakt
Mbamba Bay']
Length = 505
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDDDYDYERR-----KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D + K K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 190 DGILGDKCNRTDDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 249
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 250 ELAQRTKLTEARVQVWFSNRRARWRK 275
>gi|207113487|gb|ACI23462.1| Pax6 variant [Pseudepidalea raddei]
Length = 393
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|91086979|ref|XP_973468.1| PREDICTED: similar to Retinal homeobox protein Rx (DRx1) (DRx)
[Tribolium castaneum]
gi|270011078|gb|EFA07526.1| retinal homeobox [Tribolium castaneum]
Length = 278
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 107 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 166
Query: 84 RNER 87
R E+
Sbjct: 167 RQEK 170
>gi|260787658|ref|XP_002588869.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
gi|229274040|gb|EEN44880.1| hypothetical protein BRAFLDRAFT_235895 [Branchiostoma floridae]
Length = 76
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 50/62 (80%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF HQL LE VF +THYPD F REELA K+ L+EARVQVWFQNRRAK+R+
Sbjct: 8 KQRRNRTTFTLHQLEQLEAVFAQTHYPDVFTREELAMKINLTEARVQVWFQNRRAKWRKQ 67
Query: 86 ER 87
E+
Sbjct: 68 EK 69
>gi|268578285|ref|XP_002644125.1| C. briggsae CBR-VAB-3 protein [Caenorhabditis briggsae]
Length = 301
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
+ + EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EA
Sbjct: 42 QIEQEDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEA 101
Query: 70 RVQVWFQNRRAKFRRNER 87
R+QVWF NRRAK+RR E+
Sbjct: 102 RIQVWFSNRRAKWRREEK 119
>gi|410950169|ref|XP_003981784.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Felis catus]
Length = 159
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNERNFISHRNLDAPTSEQPLPPCTNATPLSSAP-PSSSHSFDFCAMPHS 132
R ER + + P PP P P P SF PH+
Sbjct: 84 RQERL----ESGSGAVALGPGPPAVPGLPRLLGPGPGLQASFG----PHA 125
>gi|194886966|ref|XP_001976720.1| GG23031 [Drosophila erecta]
gi|190659907|gb|EDV57120.1| GG23031 [Drosophila erecta]
Length = 427
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 7/115 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+ EDD + K K RR+RTTF++ Q++ALE++F RT YPD + REELA+ L+EARV
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDF 126
QVWF NRRA+ R+ N S P ATP +SA P+SS
Sbjct: 230 QVWFSNRRARLRK-------QLNTQQVPSFAPTSTTYGATPTTSAAPASSMGMSL 277
>gi|242019572|ref|XP_002430234.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
gi|212515334|gb|EEB17496.1| Paired mesoderm homeobox protein 2B, putative [Pediculus humanus
corporis]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 24 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQNRRAKFR 83
Query: 84 RNER 87
+ ER
Sbjct: 84 KQER 87
>gi|5758937|gb|AAD50902.1|AF169413_1 paired-box transcription factor +- isoform, partial [Ambystoma
mexicanum]
Length = 404
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 201 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 260
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 261 LPEARIQVWFSNRRAKWRREEK 282
>gi|380021433|ref|XP_003694570.1| PREDICTED: uncharacterized protein LOC100865467 [Apis florea]
Length = 386
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 39 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 93
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 94 ARVQVWFQNRRAKWRKSER 112
>gi|281485128|gb|ADA70354.1| paired-like family homeodomain transcription factor [Junonia
coenia]
Length = 264
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+QVWFQNRRAK+R+
Sbjct: 46 KQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWRKQ 105
Query: 86 ER 87
E+
Sbjct: 106 EK 107
>gi|432856452|ref|XP_004068428.1| PREDICTED: retinal homeobox protein Rx1-like [Oryzias latipes]
Length = 344
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 140 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 199
Query: 84 RNER 87
R E+
Sbjct: 200 RQEK 203
>gi|198462210|ref|XP_001352371.2| ey [Drosophila pseudoobscura pseudoobscura]
gi|198139686|gb|EAL29360.2| ey [Drosophila pseudoobscura pseudoobscura]
Length = 896
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 457 EDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 516
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 517 FSNRRAKWRREEK 529
>gi|117650669|gb|ABK54280.1| Pax3/7 [Branchiostoma belcheri]
Length = 470
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 3/78 (3%)
Query: 11 CDGEDDDYDYERRKP---KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
C GED D D E P K RR+RTTF QL LEK FERTHYPD + REELA++ L+
Sbjct: 175 CRGEDSDCDSEPDLPLKRKQRRSRTTFTPEQLEELEKAFERTHYPDIYTREELAQRTKLT 234
Query: 68 EARVQVWFQNRRAKFRRN 85
EARVQVWF NRRA++R+
Sbjct: 235 EARVQVWFSNRRARWRKQ 252
>gi|71987664|ref|NP_001024572.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|903952|gb|AAC47542.1| MAB-18 [Caenorhabditis elegans]
gi|14530407|emb|CAC42288.1| Protein VAB-3, isoform c [Caenorhabditis elegans]
gi|1583408|prf||2120400B mab-18 gene
Length = 296
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 45 EDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 104
Query: 74 WFQNRRAKFRRNE--RNFISHRNLDA 97
WF NRRAK+RR E RN S +D+
Sbjct: 105 WFSNRRAKWRREEKMRNKRSSGTMDS 130
>gi|393906366|gb|EJD74258.1| hypothetical protein LOAG_18403 [Loa loa]
Length = 290
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D ++D R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 57 DPDEDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARI 116
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 117 QVWFSNRRAKWRREEK 132
>gi|321464774|gb|EFX75780.1| eyeless [Daphnia pulex]
Length = 619
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/73 (61%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
DDD R K K +RNRT+F + Q+ +LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 271 DDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAAKIGLPEARIQVW 330
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 331 FSNRRAKWRREEK 343
>gi|51979090|gb|AAU20320.1| retinal homeobox [Platynereis dumerilii]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 112 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKINLPEVRVQVWFQNRRAKWR 171
Query: 84 RNERNFISHRNLDA---PTSEQPLPPC-TNATPL 113
R E+ + L+ S P PC TN P+
Sbjct: 172 RQEKLETASLKLNENFPMKSLAPRTPCITNTLPI 205
>gi|351714944|gb|EHB17863.1| Paired box protein Pax-6 [Heterocephalus glaber]
Length = 1055
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 822 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 881
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 882 LPEARIQVWFSNRRAKWRREEK 903
>gi|259013307|ref|NP_001158375.1| retina and anterior neural fold homeobox [Saccoglossus kowalevskii]
gi|32307771|gb|AAP79282.1| retinal homeobox [Saccoglossus kowalevskii]
Length = 353
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 56/73 (76%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+D+ + + K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVW
Sbjct: 133 NDNNNSDEPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVW 192
Query: 75 FQNRRAKFRRNER 87
FQNRRAK+RR E+
Sbjct: 193 FQNRRAKWRRQEK 205
>gi|443707331|gb|ELU02974.1| hypothetical protein CAPTEDRAFT_158069 [Capitella teleta]
Length = 325
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 58/81 (71%), Gaps = 5/81 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+R GEDD K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSE
Sbjct: 136 VRDGGEDDPP-----KIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLALSE 190
Query: 69 ARVQVWFQNRRAKFRRNERNF 89
AR+QVWFQNRRAK R+ E
Sbjct: 191 ARIQVWFQNRRAKCRKQESQL 211
>gi|68369878|ref|XP_695330.1| PREDICTED: homeobox protein aristaless-like 3-like [Danio rerio]
Length = 363
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L D D D + K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+E
Sbjct: 137 LTGDSIADSIDLSGKNKK-RRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTE 195
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R+ ER
Sbjct: 196 ARVQVWFQNRRAKWRKRER 214
>gi|47209983|emb|CAF94204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 296
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 86 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 145
Query: 84 RNER 87
+ ER
Sbjct: 146 KQER 149
>gi|334326510|ref|XP_001373881.2| PREDICTED: retinal homeobox protein Rx1-like [Monodelphis
domestica]
Length = 208
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Query: 6 MLTLRCDGE-------DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
M +CDGE E K K RRNRTTF + QL+ LE+ FER+HYPD + RE
Sbjct: 1 MFLSKCDGEPVEGRPPGSGEADEAPKKKHRRNRTTFTTFQLHQLERAFERSHYPDVYSRE 60
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRRNER 87
ELA +V L E RVQVWFQNRRAK+RR E+
Sbjct: 61 ELAMQVNLPEVRVQVWFQNRRAKWRRQEK 89
>gi|74096025|ref|NP_001027683.1| Prx1 protein [Ciona intestinalis]
gi|13444981|emb|CAC34833.1| Ci-Rx protein [Ciona intestinalis]
Length = 826
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF + QL+ LE+ FER+HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 554 KKKLRRNRTTFTTFQLHELERAFERSHYPDVYSREELAGKINLPEVRVQVWFQNRRAKWR 613
Query: 84 RNER 87
R E+
Sbjct: 614 RQEK 617
>gi|47223097|emb|CAG07184.1| unnamed protein product [Tetraodon nigroviridis]
Length = 184
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 53/67 (79%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 5 EHNKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRA 64
Query: 81 KFRRNER 87
K+RR E+
Sbjct: 65 KWRRQEK 71
>gi|331271830|gb|AED02520.1| paired box 6 protein [Coturnix japonica]
Length = 281
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 131 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 190
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 191 LPEARIQVWFSNRRAKWRREEK 212
>gi|190337675|gb|AAI63788.1| Rx3 protein [Danio rerio]
gi|190338758|gb|AAI63791.1| Rx3 protein [Danio rerio]
Length = 292
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 98 DDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 157
Query: 79 RAKFRRNERNFISHRNL 95
RAK+RR E+ +S L
Sbjct: 158 RAKWRRQEKLEVSSIKL 174
>gi|1669587|dbj|BAA13680.1| Xenopus Pax-6 long [Xenopus laevis]
Length = 421
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K ++NRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>gi|148222011|ref|NP_001079116.1| ALX homeobox protein 1 [Xenopus laevis]
gi|3023596|sp|Q91574.1|ALX1_XENLA RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1; AltName: Full=XCART1
gi|557062|gb|AAA50368.1| cartilage homeoprotein 1 precursor [Xenopus laevis]
Length = 335
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+E
Sbjct: 123 VELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTE 182
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R+ ER
Sbjct: 183 ARVQVWFQNRRAKWRKRER 201
>gi|340723862|ref|XP_003400306.1| PREDICTED: hypothetical protein LOC100648767 [Bombus terrestris]
Length = 571
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 224 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 278
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 279 ARVQVWFQNRRAKWRKSER 297
>gi|5758941|gb|AAD50904.1|AF169415_1 paired-box transcription factor -- isoform, partial [Ambystoma
mexicanum]
Length = 390
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 187 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 246
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 247 LPEARIQVWFSNRRAKWRREEK 268
>gi|313212674|emb|CBY36614.1| unnamed protein product [Oikopleura dioica]
Length = 236
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF + QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 50 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 109
Query: 84 RNER 87
R E+
Sbjct: 110 RQEK 113
>gi|148224192|ref|NP_001084385.1| paired-like homeobox 2a [Xenopus laevis]
gi|38425325|gb|AAR19764.1| homeodomain protein [Xenopus laevis]
gi|115529155|gb|AAI24892.1| Phox2a protein [Xenopus laevis]
Length = 281
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 148
Query: 84 RNER 87
+ ER
Sbjct: 149 KQER 152
>gi|449501716|ref|XP_004176235.1| PREDICTED: LOW QUALITY PROTEIN: paired box protein Pax-6
[Taeniopygia guttata]
Length = 546
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 319 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 378
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 379 LPEARIQVWFSNRRAKWRREEK 400
>gi|213624006|gb|AAI70518.1| Unknown (protein for MGC:197245) [Xenopus laevis]
gi|213625396|gb|AAI70520.1| Unknown (protein for MGC:197247) [Xenopus laevis]
Length = 335
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+E
Sbjct: 123 VELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTE 182
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R+ ER
Sbjct: 183 ARVQVWFQNRRAKWRKRER 201
>gi|157129916|ref|XP_001661815.1| paired box protein, putative [Aedes aegypti]
gi|108872028|gb|EAT36253.1| AAEL011647-PA [Aedes aegypti]
Length = 283
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 21 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQNRRAKFR 80
Query: 84 RNER 87
+ ER
Sbjct: 81 KQER 84
>gi|195133952|ref|XP_002011402.1| GI14081 [Drosophila mojavensis]
gi|193912025|gb|EDW10892.1| GI14081 [Drosophila mojavensis]
Length = 891
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 486 EDDQARLILKRKLQRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 545
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 546 FSNRRAKWRREEK 558
>gi|18859339|ref|NP_571302.1| retinal homeobox protein Rx3 [Danio rerio]
gi|18202036|sp|O42358.1|RX3_DANRE RecName: Full=Retinal homeobox protein Rx3
gi|2240030|gb|AAB62327.1| retinal homeobox protein [Danio rerio]
Length = 292
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 98 DDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 157
Query: 79 RAKFRRNERNFISHRNL 95
RAK+RR E+ +S L
Sbjct: 158 RAKWRRQEKLEVSSIKL 174
>gi|154146243|ref|NP_001093644.1| homeobox protein ARX [Rattus norvegicus]
gi|160016491|sp|A6YP92.1|ARX_RAT RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|149688998|gb|ABR27821.1| aristaless-related homeobox protein [Rattus norvegicus]
Length = 566
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 310 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 369
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 370 DLTEARVQVWFQNRRAKWRKREK 392
>gi|426395443|ref|XP_004063982.1| PREDICTED: homeobox protein ARX [Gorilla gorilla gorilla]
Length = 525
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 269 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 328
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 329 DLTEARVQVWFQNRRAKWRKREK 351
>gi|397497709|ref|XP_003819648.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX [Pan paniscus]
Length = 633
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 374 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 433
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 434 DLTEARVQVWFQNRRAKWRKREK 456
>gi|149035327|gb|EDL90031.1| paired-like homeobox 2b (predicted) [Rattus norvegicus]
Length = 294
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|301776410|ref|XP_002923607.1| PREDICTED: retina and anterior neural fold homeobox protein
2-like [Ailuropoda melanoleuca]
gi|281337977|gb|EFB13561.1| hypothetical protein PANDA_012800 [Ailuropoda melanoleuca]
Length = 184
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 53/71 (74%)
Query: 28 RRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+RR ER
Sbjct: 28 RRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWRRQER 87
Query: 88 NFISHRNLDAP 98
R + AP
Sbjct: 88 LESGSRAVAAP 98
>gi|965067|gb|AAA82992.1| male abnormal-18, partial [Caenorhabditis elegans]
gi|1583406|prf||2120399B mab-18 gene
Length = 261
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 10 EDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 69
Query: 74 WFQNRRAKFRRNE--RNFISHRNLDA 97
WF NRRAK+RR E RN S +D+
Sbjct: 70 WFSNRRAKWRREEKMRNKRSSGTMDS 95
>gi|307211957|gb|EFN87869.1| Dorsal root ganglia homeobox protein [Harpegnathos saltator]
Length = 356
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 10 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 64
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 65 ARVQVWFQNRRAKWRKSER 83
>gi|71987657|ref|NP_001024571.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
gi|14530406|emb|CAC42287.1| Protein VAB-3, isoform b [Caenorhabditis elegans]
Length = 269
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 54/74 (72%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 18 EDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 77
Query: 74 WFQNRRAKFRRNER 87
WF NRRAK+RR E+
Sbjct: 78 WFSNRRAKWRREEK 91
>gi|356582262|ref|NP_001239128.1| paired-like homeobox 2a [Xenopus (Silurana) tropicalis]
Length = 281
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 89 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 148
Query: 84 RNER 87
+ ER
Sbjct: 149 KQER 152
>gi|194761770|ref|XP_001963098.1| GF14108 [Drosophila ananassae]
gi|190616795|gb|EDV32319.1| GF14108 [Drosophila ananassae]
Length = 387
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 161 KQRRSRTNFTLDQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 220
Query: 86 ERNFISHRNL----DAPTSEQPLPPC 107
E H+ +P PL PC
Sbjct: 221 ENQM--HKGFLVGSRSPPIATPLEPC 244
>gi|403263874|ref|XP_003924228.1| PREDICTED: homeobox protein ARX [Saimiri boliviensis boliviensis]
Length = 464
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 208 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 267
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 268 DLTEARVQVWFQNRRAKWRKREK 290
>gi|221113766|ref|XP_002168027.1| PREDICTED: homeobox protein DLX-1-like [Hydra magnipapillata]
Length = 318
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 51/59 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRR 84
K RR RTTF +HQL+ LE+VF RTHYPD F+REE+A K+ L+EAR+QVWFQNRRAK+R+
Sbjct: 146 KKRRYRTTFTTHQLDELERVFNRTHYPDIFLREEMAVKLGLTEARIQVWFQNRRAKWRK 204
>gi|170576749|ref|XP_001893749.1| Homeobox domain containing protein [Brugia malayi]
gi|158600048|gb|EDP37405.1| Homeobox domain containing protein [Brugia malayi]
Length = 224
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
+R K RRNRTTF + QL+ LE+ FER HYPD + RE LA+KV L E RVQVWFQNRRA
Sbjct: 44 DRESKKQRRNRTTFTTFQLHELEQAFERCHYPDVYARELLAQKVKLPEVRVQVWFQNRRA 103
Query: 81 KFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPH 131
K+RR ++ ++ LPP ++TP + +H DF + H
Sbjct: 104 KWRRQDK--------AESSAIADLPPVRHSTPGIPSWAWMTHPDDFSGLMH 146
>gi|113120207|gb|ABI30251.1| Rx1 [Nematostella vectensis]
Length = 243
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/115 (46%), Positives = 67/115 (58%), Gaps = 11/115 (9%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + R+ K RRNRTTF QL LEKVFE+ HYPD +REELA K+ +SEAR+Q
Sbjct: 55 GSDSENPATVRR-KQRRNRTTFTKQQLQELEKVFEKKHYPDIALREELAAKINISEARIQ 113
Query: 73 VWFQNRRAKFRRNE--------RNFISHRNLDA--PTSEQPLPPCTNATPLSSAP 117
VWFQNRRAK+R+ + +N + H L P + +P PC S P
Sbjct: 114 VWFQNRRAKWRKLQNPNHSLLKKNRLHHEKLQGQLPIAPRPGLPCGGPNYFLSLP 168
>gi|260826474|ref|XP_002608190.1| retinal homeobox protein-like protein [Branchiostoma floridae]
gi|229293541|gb|EEN64200.1| retinal homeobox protein-like protein [Branchiostoma floridae]
Length = 268
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
KP+RNRTTF++ QL LE+ F +THYPD F+REELA +V L E+RVQVWFQNRRAK+R+
Sbjct: 111 KPKRNRTTFSTRQLQELERAFRQTHYPDIFMREELAMRVNLPESRVQVWFQNRRAKWRKR 170
Query: 86 ERNFISHRNLDAPTSEQP---LPPCTNATPLSSAPP 118
E++ +++ P + P + PL PP
Sbjct: 171 EKHLHDMGDVEFPDGTRERLHYGPFSRFDPLGHLPP 206
>gi|18138032|emb|CAC80518.1| paired box protein [Mus musculus]
Length = 309
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 203 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 262
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 263 LPEARIQVWFSNRRAKWRREEK 284
>gi|1684800|gb|AAB36534.1| paired box homeodomain protein TPAX6, partial [Mesotriton
alpestris]
Length = 233
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 47 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 106
Query: 66 LSEARVQVWFQNRRAKFRRNE 86
L EAR+QVWF NRRAK+RR E
Sbjct: 107 LPEARIQVWFSNRRAKWRREE 127
>gi|70571090|dbj|BAE06677.1| transcription factor protein [Ciona intestinalis]
Length = 486
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF + QL+ LE+ FER+HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 223 KKKLRRNRTTFTTFQLHELERAFERSHYPDVYSREELAGKINLPEVRVQVWFQNRRAKWR 282
Query: 84 RNER 87
R E+
Sbjct: 283 RQEK 286
>gi|444509491|gb|ELV09287.1| Retina and anterior neural fold homeobox protein 2 [Tupaia
chinensis]
Length = 181
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
+G E K KPRRNRT F +HQL LE+ F+ +HYPD + REELA KV L E R
Sbjct: 11 AEGGGLGPGQEAPKKKPRRNRTAFTTHQLCQLERAFQASHYPDVYSREELAAKVHLPEVR 70
Query: 71 VQVWFQNRRAKFRR---NERNFISHRNLDAPTSEQPLPPCT 108
VQVWFQNRRAK+R+ + R DAP P PP
Sbjct: 71 VQVWFQNRRAKWRQIGSAAGTGAAPRLPDAPALPFPRPPAV 111
>gi|24497589|ref|NP_620689.1| homeobox protein ARX [Homo sapiens]
gi|27923733|sp|Q96QS3.1|ARX_HUMAN RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|15315600|gb|AAK93901.1| aristaless-related homeobox protein ARX [Homo sapiens]
gi|119619437|gb|EAW99031.1| aristaless related homeobox, isoform CRA_a [Homo sapiens]
Length = 562
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 306 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 365
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 366 DLTEARVQVWFQNRRAKWRKREK 388
>gi|348534162|ref|XP_003454572.1| PREDICTED: paired box protein Pax-7-like isoform 1 [Oreochromis
niloticus]
Length = 502
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDD--DYDYERRKP---KPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D D E P K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 187 DGILGDKCNRTDDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 247 ELAQRTKLTEARVQVWFSNRRARWRK 272
>gi|328697098|ref|XP_001944012.2| PREDICTED: retinal homeobox protein Rx-like [Acyrthosiphon pisum]
Length = 290
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 72/126 (57%), Gaps = 12/126 (9%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 94 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWR 153
Query: 84 RNER--------NFISHRNLDAPTSEQPLPPCTNATPLSS--APPSSSHSFDFCAMPHSQ 133
R E+ N H + S +P + A P+ +PP S F + P +
Sbjct: 154 RQEKMEAARLGLNDYVHSTMTGSLSR--MPGSSLALPVDPWLSPPLLSALPGFLSHPQTG 211
Query: 134 CNSTCT 139
S T
Sbjct: 212 YPSYLT 217
>gi|242013225|ref|XP_002427315.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
gi|212511656|gb|EEB14577.1| Short stature homeobox protein, putative [Pediculus humanus
corporis]
Length = 218
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 8/84 (9%)
Query: 11 CDGED--------DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAK 62
C+GED + + + + K RR+RT F QLN LE++F+ THYPDAF+REEL++
Sbjct: 7 CNGEDGHIIGIQTNSHSSSKLQNKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQ 66
Query: 63 KVCLSEARVQVWFQNRRAKFRRNE 86
++ LSEARVQVWFQNRRAK R++E
Sbjct: 67 RLGLSEARVQVWFQNRRAKCRKHE 90
>gi|109130220|ref|XP_001091313.1| PREDICTED: homeobox protein ARX [Macaca mulatta]
Length = 562
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 306 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 365
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 366 DLTEARVQVWFQNRRAKWRKREK 388
>gi|405964577|gb|EKC30046.1| Short stature homeobox protein [Crassostrea gigas]
Length = 274
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
GE+ D+ K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQ
Sbjct: 97 GEERDHP----KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQ 152
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPP 118
VWFQNRRAK R+ E + L PL C TP + PP
Sbjct: 153 VWFQNRRAKCRKQESQ-MQKAGLLIQAQGTPLDAC-RMTPYVTMPP 196
>gi|395521290|ref|XP_003764751.1| PREDICTED: paired mesoderm homeobox protein 2A [Sarcophilus
harrisii]
Length = 294
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 90 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 149
Query: 84 RNER 87
+ ER
Sbjct: 150 KQER 153
>gi|312381847|gb|EFR27493.1| hypothetical protein AND_05774 [Anopheles darlingi]
Length = 524
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QLN LE++FE THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 441 KQRRSRTNFTLEQLNELERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 500
Query: 86 ERNF 89
E
Sbjct: 501 ENQL 504
>gi|296062658|emb|CBL93955.1| paired box 6 transcript variant [Podarcis siculus]
Length = 173
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 9 LRCDGEDDDYDYERRKPK--PRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
+ +GED D R + K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L
Sbjct: 1 ISSNGEDSDEAQMRLQLKRQLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDL 60
Query: 67 SEARVQVWFQNRRAKFRRNER 87
EAR+QVWF NRRAK+RR E+
Sbjct: 61 PEARIQVWFSNRRAKWRREEK 81
>gi|903948|gb|AAC47541.1| MAB-18 [Caenorhabditis elegans]
gi|1583407|prf||2120400A mab-18 gene
Length = 284
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 33 EDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 92
Query: 74 WFQNRRAKFRRNE--RNFISHRNLDA 97
WF NRRAK+RR E RN S +D+
Sbjct: 93 WFSNRRAKWRREEKMRNKRSSGTMDS 118
>gi|324508780|gb|ADY43703.1| Paired box protein Pax-6 [Ascaris suum]
Length = 470
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D ++D R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 199 DPDEDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARI 258
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 259 QVWFSNRRAKWRREEK 274
>gi|195469385|ref|XP_002099618.1| GE14559 [Drosophila yakuba]
gi|194185719|gb|EDW99330.1| GE14559 [Drosophila yakuba]
Length = 898
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 458 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 517
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 518 FSNRRAKWRREEK 530
>gi|47223503|emb|CAF97990.1| unnamed protein product [Tetraodon nigroviridis]
Length = 610
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 59/88 (67%)
Query: 3 YDWMLTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAK 62
Y + T C D + K K RR RTTF S+QL LE+ F++THYPD F REELA
Sbjct: 245 YPDVFTSVCLSAGSDTEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAM 304
Query: 63 KVCLSEARVQVWFQNRRAKFRRNERNFI 90
++ L+EARVQVWFQNRRAK+R+ E+ +
Sbjct: 305 RLDLTEARVQVWFQNRRAKWRKREKAGV 332
>gi|350422605|ref|XP_003493225.1| PREDICTED: hypothetical protein LOC100742723 [Bombus impatiens]
Length = 563
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 56/79 (70%), Gaps = 5/79 (6%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+E
Sbjct: 226 LHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFAQTHYPDVFTREDLAMKINLTE 280
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R++ER
Sbjct: 281 ARVQVWFQNRRAKWRKSER 299
>gi|263359659|gb|ACY70495.1| hypothetical protein DVIR88_6g0032 [Drosophila virilis]
Length = 909
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 484 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 543
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 544 FSNRRAKWRREEK 556
>gi|344254792|gb|EGW10896.1| Homeobox protein aristaless-like 3 [Cricetulus griseus]
Length = 200
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/69 (62%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
+ + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 2 ELAKSKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNR 61
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 62 RAKWRKRER 70
>gi|290789888|pdb|3A01|B Chain B, Crystal Structure Of Aristaless And Clawless
Homeodomains Bo
gi|290789892|pdb|3A01|F Chain F, Crystal Structure Of Aristaless And Clawless
Homeodomains Bo
Length = 67
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+QVWFQNRRAK+R
Sbjct: 3 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 62
Query: 84 RNER 87
+ E+
Sbjct: 63 KQEK 66
>gi|260802230|ref|XP_002595995.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
gi|229281249|gb|EEN52007.1| hypothetical protein BRAFLDRAFT_84069 [Branchiostoma floridae]
Length = 406
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 123 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 182
Query: 84 RNER 87
+ ER
Sbjct: 183 KQER 186
>gi|26024213|ref|NP_031518.2| homeobox protein ARX [Mus musculus]
gi|27923957|sp|O35085.3|ARX_MOUSE RecName: Full=Homeobox protein ARX; AltName:
Full=Aristaless-related homeobox
gi|22163970|dbj|BAA28284.2| Arx homeoprotein [Mus musculus]
gi|30354717|gb|AAH52033.1| Aristaless related homeobox [Mus musculus]
Length = 564
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 308 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 367
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 368 DLTEARVQVWFQNRRAKWRKREK 390
>gi|402909744|ref|XP_003917569.1| PREDICTED: homeobox protein ARX [Papio anubis]
Length = 424
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 168 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 227
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 228 DLTEARVQVWFQNRRAKWRKREK 250
>gi|170045356|ref|XP_001850278.1| paired box protein [Culex quinquefasciatus]
gi|167868438|gb|EDS31821.1| paired box protein [Culex quinquefasciatus]
Length = 479
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D E+RK RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWF
Sbjct: 81 DSVLAEKRKQ--RRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWF 138
Query: 76 QNRRAKFRRNER 87
QNRRAKFR+ ER
Sbjct: 139 QNRRAKFRKQER 150
>gi|119589694|gb|EAW69288.1| retina and anterior neural fold homeobox like 1 [Homo sapiens]
Length = 230
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 84 RNER 87
R ER
Sbjct: 130 RQER 133
>gi|15741042|gb|AAK26167.1| Pax6A [Girardia tigrina]
Length = 464
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/98 (51%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E+DD + ++ K +RNRT+F++ QL++LEK FERTHYPD F RE+LA K+ L EAR+QV
Sbjct: 210 ENDDMRIKLKR-KLQRNRTSFSTDQLDSLEKEFERTHYPDVFAREKLADKISLPEARIQV 268
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNAT 111
WF NRRAK+RR E+ +NL +S TN T
Sbjct: 269 WFSNRRAKWRREEKLRRQRQNLMLGSSGTSSTAETNVT 306
>gi|410908673|ref|XP_003967815.1| PREDICTED: ALX homeobox protein 1-like [Takifugu rubripes]
Length = 320
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 104 DDMTDKCDSNVSSSKKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARV 163
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 164 QVWFQNRRAKWRKRER 179
>gi|113682307|ref|NP_001038539.1| ALX homeobox protein 1 [Danio rerio]
gi|94732446|emb|CAK11128.1| novel protein similar to vertebrate cartilage paired-class
homeoprotein 1 (CART1) [Danio rerio]
Length = 320
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARVQVWFQNRRAK+R+
Sbjct: 119 KKRRHRTTFTSAQLEELEKVFQKTHYPDVYVREQLAMRTELTEARVQVWFQNRRAKWRKR 178
Query: 86 ER 87
ER
Sbjct: 179 ER 180
>gi|348534164|ref|XP_003454573.1| PREDICTED: paired box protein Pax-7-like isoform 2 [Oreochromis
niloticus]
Length = 516
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDD--DYDYERRKP---KPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D D E P K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 201 DGILGDKCNRTDDASDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 260
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 261 ELAQRTKLTEARVQVWFSNRRARWRK 286
>gi|334327857|ref|XP_001369519.2| PREDICTED: paired mesoderm homeobox protein 2A-like [Monodelphis
domestica]
Length = 234
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 30 KRKQRRIRTTFTSSQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 89
Query: 84 RNER 87
+ ER
Sbjct: 90 KQER 93
>gi|301604045|ref|XP_002931669.1| PREDICTED: ALX homeobox protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 326
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|1669589|dbj|BAA13681.1| Xenopus Pax-6 short [Xenopus laevis]
Length = 370
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K ++NRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQKNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRREASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>gi|15080680|dbj|BAB62531.1| paired box transcription factor Pax6 [Lethenteron camtschaticum]
Length = 448
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 8 TLRCDGEDDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
+L DD D + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 221 SLSNSASDDSEDAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLASKI 280
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 281 DLPEARIQVWFSNRRAKWRREEK 303
>gi|426386634|ref|XP_004059788.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Gorilla gorilla gorilla]
Length = 230
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 84 RNER 87
R ER
Sbjct: 130 RQER 133
>gi|167900486|ref|NP_001108138.1| aristaless related homeobox [Canis lupus familiaris]
Length = 574
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 318 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 377
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 378 DLTEARVQVWFQNRRAKWRKREK 400
>gi|355564508|gb|EHH21008.1| Cartilage homeoprotein 1 [Macaca mulatta]
Length = 326
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|348555401|ref|XP_003463512.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Cavia
porcellus]
Length = 285
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 85 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 143 AKFRKQER 150
>gi|348580359|ref|XP_003475946.1| PREDICTED: ALX homeobox protein 1-like [Cavia porcellus]
Length = 353
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 144 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 203
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 204 QVWFQNRRAKWRKRER 219
>gi|380805315|gb|AFE74533.1| homeobox protein ARX, partial [Macaca mulatta]
Length = 161
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/114 (45%), Positives = 68/114 (59%), Gaps = 12/114 (10%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 32 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 91
Query: 65 CLSEARVQVWFQNRRAKFRRNER-----NFISHRNLDAPTSEQPLPPCTNATPL 113
L+EARVQVWFQNRRAK+R+ E+ + ++ PL P +A+P
Sbjct: 92 DLTEARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSPYLDASPF 145
>gi|395838112|ref|XP_003791968.1| PREDICTED: homeobox protein ARX [Otolemur garnettii]
Length = 570
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 314 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 373
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 374 DLTEARVQVWFQNRRAKWRKREK 396
>gi|296212490|ref|XP_002752854.1| PREDICTED: ALX homeobox protein 1 [Callithrix jacchus]
Length = 326
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|1098654|gb|AAB08960.1| Cart-1 [Homo sapiens]
Length = 326
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDTNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|432852505|ref|XP_004067281.1| PREDICTED: paired box protein Pax-6 isoform 1 [Oryzias latipes]
gi|3914281|sp|O73917.1|PAX6_ORYLA RecName: Full=Paired box protein Pax-6
gi|3115324|emb|CAA04395.1| Pax6 [Oryzias latipes]
Length = 437
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>gi|296232532|ref|XP_002761628.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Callithrix jacchus]
Length = 227
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 67 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 126
Query: 84 RNER 87
R ER
Sbjct: 127 RQER 130
>gi|402886991|ref|XP_003906892.1| PREDICTED: ALX homeobox protein 1 [Papio anubis]
gi|355786349|gb|EHH66532.1| Cartilage homeoprotein 1 [Macaca fascicularis]
Length = 326
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|351706553|gb|EHB09472.1| ALX homeobox protein 1 [Heterocephalus glaber]
Length = 327
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 118 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 177
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 178 QVWFQNRRAKWRKRER 193
>gi|218675700|gb|AAI69334.2| aristaless related homeobox [synthetic construct]
Length = 248
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + +RK RR RTTF S+QL LE+ F++THYPD F REELA ++ L+EARVQ
Sbjct: 2 GSDSEEGLLKRKQ--RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 59
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ E+
Sbjct: 60 VWFQNRRAKWRKREK 74
>gi|291407255|ref|XP_002720021.1| PREDICTED: aristaless related homeobox [Oryctolagus cuniculus]
Length = 454
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 198 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 257
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 258 DLTEARVQVWFQNRRAKWRKREK 280
>gi|403263094|ref|XP_003923895.1| PREDICTED: paired mesoderm homeobox protein 2A [Saimiri boliviensis
boliviensis]
Length = 247
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|284005045|ref|NP_001164685.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
gi|283462198|gb|ADB22393.1| aristaless homeodomain transcription factor [Saccoglossus
kowalevskii]
Length = 256
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF S QL+ +EKVF+RTHYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 102 KRKKRRNRTTFTSFQLDEMEKVFQRTHYPDVYSREQLALRCDLTEARVQVWFQNRRAKWR 161
Query: 84 RNER 87
+ ER
Sbjct: 162 KRER 165
>gi|224094163|ref|XP_002196043.1| PREDICTED: ALX homeobox protein 1 [Taeniopygia guttata]
Length = 328
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EAR
Sbjct: 118 LDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEAR 177
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ ER
Sbjct: 178 VQVWFQNRRAKWRKRER 194
>gi|403272040|ref|XP_003927898.1| PREDICTED: ALX homeobox protein 1 [Saimiri boliviensis boliviensis]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|431922297|gb|ELK19388.1| Retina and anterior neural fold homeobox protein 2 [Pteropus
alecto]
Length = 184
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/78 (60%), Positives = 56/78 (71%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF+++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 21 EAPKKKHRRNRTTFSTYQLHQLERAFEASHYPDIYSREELAAKVHLPEVRVQVWFQNRRA 80
Query: 81 KFRRNERNFISHRNLDAP 98
K+RR ER + AP
Sbjct: 81 KWRRQERLESGSGAMSAP 98
>gi|332221029|ref|XP_003259660.1| PREDICTED: ALX homeobox protein 1 [Nomascus leucogenys]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|194759514|ref|XP_001961992.1| GF15246 [Drosophila ananassae]
gi|190615689|gb|EDV31213.1| GF15246 [Drosophila ananassae]
Length = 589
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+EARVQVWFQ
Sbjct: 44 DETFVRRKQ--RRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
Query: 77 NRRAKFRRNER 87
NRRAK+R+ ER
Sbjct: 102 NRRAKWRKAER 112
>gi|395820130|ref|XP_003783428.1| PREDICTED: ALX homeobox protein 1 [Otolemur garnettii]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|395755881|ref|XP_002833676.2| PREDICTED: paired box protein Pax-6-like, partial [Pongo abelii]
Length = 226
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F R+ LA K+
Sbjct: 14 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARQRLAAKID 73
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 74 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 131
Query: 114 SS 115
SS
Sbjct: 132 SS 133
>gi|348509484|ref|XP_003442278.1| PREDICTED: paired box protein Pax-6-like isoform 1 [Oreochromis
niloticus]
Length = 437
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>gi|432852507|ref|XP_004067282.1| PREDICTED: paired box protein Pax-6 isoform 2 [Oryzias latipes]
Length = 449
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 220 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 280 LPEARIQVWFSNRRAKWRREEK 301
>gi|73987445|ref|XP_854816.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Canis lupus familiaris]
Length = 184
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 52/67 (77%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 21 ETPKKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRA 80
Query: 81 KFRRNER 87
K+RR ER
Sbjct: 81 KWRRQER 87
>gi|154813201|ref|NP_008913.2| ALX homeobox protein 1 [Homo sapiens]
gi|114646088|ref|XP_509250.2| PREDICTED: ALX homeobox protein 1 [Pan troglodytes]
gi|397480872|ref|XP_003811689.1| PREDICTED: ALX homeobox protein 1 [Pan paniscus]
gi|90111820|sp|Q15699.2|ALX1_HUMAN RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|15012050|gb|AAH10923.1| ALX homeobox 1 [Homo sapiens]
gi|46946691|emb|CAD90155.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
gi|61363409|gb|AAX42385.1| cartilage paired-class homeoprotein 1 [synthetic construct]
gi|119617804|gb|EAW97398.1| cartilage paired-class homeoprotein 1 [Homo sapiens]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|194226627|ref|XP_001493780.2| PREDICTED: ALX homeobox protein 1 [Equus caballus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|327272822|ref|XP_003221183.1| PREDICTED: ALX homeobox protein 1-like [Anolis carolinensis]
Length = 331
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EAR
Sbjct: 121 LDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEAR 180
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ ER
Sbjct: 181 VQVWFQNRRAKWRKRER 197
>gi|348509486|ref|XP_003442279.1| PREDICTED: paired box protein Pax-6-like isoform 2 [Oreochromis
niloticus]
Length = 449
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 220 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 279
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 280 LPEARIQVWFSNRRAKWRREEK 301
>gi|291389679|ref|XP_002711420.1| PREDICTED: cartilage paired-class homeoprotein 1 [Oryctolagus
cuniculus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|354488799|ref|XP_003506553.1| PREDICTED: ALX homeobox protein 1 [Cricetulus griseus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|189236734|ref|XP_001815189.1| PREDICTED: similar to paired box protein [Tribolium castaneum]
Length = 268
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 40 KRKQRRIRTTFTSAQLKELERAFQETHYPDIYTREEIAMKIDLTEARVQVWFQNRRAKFR 99
Query: 84 RNER 87
+ ER
Sbjct: 100 KQER 103
>gi|440898843|gb|ELR50257.1| ALX homeobox protein 1 [Bos grunniens mutus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|24638704|ref|NP_726607.1| eyeless, isoform B [Drosophila melanogaster]
gi|22759376|gb|AAN06513.1| eyeless, isoform B [Drosophila melanogaster]
gi|40882541|gb|AAR96182.1| GH01157p [Drosophila melanogaster]
gi|220952578|gb|ACL88832.1| ey-PB [synthetic construct]
Length = 624
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 185 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 244
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 245 FSNRRAKWRREEK 257
>gi|340378028|ref|XP_003387530.1| PREDICTED: retinal homeobox protein Rx-A-like [Amphimedon
queenslandica]
Length = 296
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/62 (61%), Positives = 52/62 (83%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K +RNRTTF +HQL+ LE +F +THYPD +RE+LA+++ L E+RVQVWFQNRRAK+R+
Sbjct: 77 KSKRNRTTFTAHQLDELEMIFRQTHYPDVLLREKLAQRIGLPESRVQVWFQNRRAKWRKR 136
Query: 86 ER 87
E+
Sbjct: 137 EK 138
>gi|195354419|ref|XP_002043695.1| ey [Drosophila sechellia]
gi|194128883|gb|EDW50926.1| ey [Drosophila sechellia]
Length = 899
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 459 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 518
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 519 FSNRRAKWRREEK 531
>gi|344266437|ref|XP_003405287.1| PREDICTED: ALX homeobox protein 1 [Loxodonta africana]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|301782565|ref|XP_002926696.1| PREDICTED: ALX homeobox protein 1-like [Ailuropoda melanoleuca]
gi|281346099|gb|EFB21683.1| hypothetical protein PANDA_016388 [Ailuropoda melanoleuca]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|149639200|ref|XP_001516357.1| PREDICTED: retinal homeobox protein Rx1-like [Ornithorhynchus
anatinus]
Length = 231
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 54/72 (75%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 35 KKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNRRAKWR 94
Query: 84 RNERNFISHRNL 95
R E+ S L
Sbjct: 95 RQEKMEASSTKL 106
>gi|6978601|ref|NP_037053.1| ALX homeobox protein 1 [Rattus norvegicus]
gi|3023581|sp|Q63087.1|ALX1_RAT RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|413751|gb|AAA40877.1| homeoprotein 1 [Rattus norvegicus]
gi|149067054|gb|EDM16787.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|149067055|gb|EDM16788.1| cartilage homeo protein 1, isoform CRA_a [Rattus norvegicus]
gi|165970652|gb|AAI58592.1| ALX homeobox 1 [Rattus norvegicus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|432857457|ref|XP_004068690.1| PREDICTED: paired box protein Pax-7-like isoform 3 [Oryzias
latipes]
Length = 511
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 4 DWMLTLRCDGEDDDYDYER-RKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAK 62
D +L + DG D D + + K K RR+RTTF + QL LEK FERTHYPD + REELA+
Sbjct: 200 DGILGDKYDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTREELAQ 259
Query: 63 KVCLSEARVQVWFQNRRAKFRR 84
+ L+EARVQVWF NRRA++R+
Sbjct: 260 RTKLTEARVQVWFSNRRARWRK 281
>gi|431892095|gb|ELK02542.1| ALX homeobox protein 1 [Pteropus alecto]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|363733528|ref|XP_001234151.2| PREDICTED: paired mesoderm homeobox protein 2B [Gallus gallus]
Length = 250
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKLER 158
>gi|332255913|ref|XP_003277070.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 1 [Nomascus leucogenys]
Length = 230
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 70 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 129
Query: 84 RNER 87
R ER
Sbjct: 130 RQER 133
>gi|300796276|ref|NP_001179220.1| ALX homeobox protein 1 [Bos taurus]
gi|426224245|ref|XP_004006284.1| PREDICTED: ALX homeobox protein 1 [Ovis aries]
gi|296487990|tpg|DAA30103.1| TPA: ALX homeobox protein 1-like [Bos taurus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|410965202|ref|XP_003989139.1| PREDICTED: ALX homeobox protein 1 [Felis catus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EAR
Sbjct: 116 LDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEAR 175
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ ER
Sbjct: 176 VQVWFQNRRAKWRKRER 192
>gi|405966276|gb|EKC31583.1| Paired box protein Pax-6 [Crassostrea gigas]
Length = 481
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 3/81 (3%)
Query: 10 RCDGEDDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
+ +G++++ D + R K K +RNRT+F + Q+ ALEK FERTHYPD F RE L++K+ L
Sbjct: 245 QSEGQNNETDEQLRLRLKRKLQRNRTSFTAAQIEALEKEFERTHYPDVFARERLSQKIDL 304
Query: 67 SEARVQVWFQNRRAKFRRNER 87
EAR+QVWF NRRAK+RR E+
Sbjct: 305 PEARIQVWFSNRRAKWRREEK 325
>gi|156378114|ref|XP_001630989.1| predicted protein [Nematostella vectensis]
gi|156218021|gb|EDO38926.1| predicted protein [Nematostella vectensis]
Length = 180
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 55/73 (75%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D K K RRNRTTF ++QL +E+VF++THYPD + RE+LA + L+EARVQVW
Sbjct: 2 DSDSGDSAPKRKKRRNRTTFTAYQLEEMERVFQKTHYPDVYTREQLALRCALTEARVQVW 61
Query: 75 FQNRRAKFRRNER 87
FQNRRAK+R+ ER
Sbjct: 62 FQNRRAKWRKRER 74
>gi|432852509|ref|XP_004067283.1| PREDICTED: paired box protein Pax-6 isoform 3 [Oryzias latipes]
Length = 457
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 228 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 287
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 288 LPEARIQVWFSNRRAKWRREEK 309
>gi|194913493|ref|XP_001982710.1| GG16399 [Drosophila erecta]
gi|190647926|gb|EDV45229.1| GG16399 [Drosophila erecta]
Length = 900
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 460 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 519
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 520 FSNRRAKWRREEK 532
>gi|27369774|ref|NP_766141.1| ALX homeobox protein 1 [Mus musculus]
gi|67460551|sp|Q8C8B0.1|ALX1_MOUSE RecName: Full=ALX homeobox protein 1; AltName: Full=Cartilage
homeoprotein 1; Short=CART-1
gi|26339004|dbj|BAC33173.1| unnamed protein product [Mus musculus]
gi|30353921|gb|AAH52200.1| ALX homeobox 1 [Mus musculus]
gi|148689727|gb|EDL21674.1| cartilage homeo protein 1 [Mus musculus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|335305801|ref|XP_003360298.1| PREDICTED: homeobox protein ARX-like [Sus scrofa]
Length = 380
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 124 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 183
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 184 DLTEARVQVWFQNRRAKWRKREK 206
>gi|410899545|ref|XP_003963257.1| PREDICTED: homeobox protein aristaless-like 3-like [Takifugu
rubripes]
Length = 359
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 155 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWR 214
Query: 84 RNER 87
+ ER
Sbjct: 215 KRER 218
>gi|269931719|gb|ACZ54379.1| paired box 6 [Monodelphis domestica]
Length = 282
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 193 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 252
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 253 LPEARIQVWFSNRRAKWRREEK 274
>gi|126339394|ref|XP_001364457.1| PREDICTED: ALX homeobox protein 1 [Monodelphis domestica]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|71987648|ref|NP_001024570.1| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|965066|gb|AAA82991.1| variable abnormal-3 [Caenorhabditis elegans]
gi|6434263|emb|CAA90186.2| Protein VAB-3, isoform a [Caenorhabditis elegans]
gi|1583405|prf||2120399A vab-3 gene
Length = 455
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
EDD R K K +RNRT+F Q+ +LEK FERTHYPD F RE LA+K+ L EAR+QV
Sbjct: 204 EDDAAARMRLKRKLQRNRTSFTQVQIESLEKEFERTHYPDVFARERLAQKIQLPEARIQV 263
Query: 74 WFQNRRAKFRRNE--RNFISHRNLDAPTS 100
WF NRRAK+RR E RN S +D+ S
Sbjct: 264 WFSNRRAKWRREEKMRNKRSSGTMDSSLS 292
>gi|363727605|ref|XP_425445.3| PREDICTED: ALX homeobox protein 1 [Gallus gallus]
Length = 328
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EAR
Sbjct: 118 LDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEAR 177
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ ER
Sbjct: 178 VQVWFQNRRAKWRKRER 194
>gi|345780690|ref|XP_539704.3| PREDICTED: ALX homeobox protein 1 [Canis lupus familiaris]
Length = 265
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EAR
Sbjct: 55 LDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEAR 114
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ ER
Sbjct: 115 VQVWFQNRRAKWRKRER 131
>gi|311256745|ref|XP_003126788.1| PREDICTED: ALX homeobox protein 1 [Sus scrofa]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|149638014|ref|XP_001513012.1| PREDICTED: ALX homeobox protein 1 [Ornithorhynchus anatinus]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 4/83 (4%)
Query: 9 LRCDGEDDDY----DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
L+ GE D+ D K RR+RTTF S QL LEKVF++THYPD +VRE+LA +
Sbjct: 110 LQEKGELDELGDKCDSNVTSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRT 169
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ ER
Sbjct: 170 ELTEARVQVWFQNRRAKWRKRER 192
>gi|62473168|ref|NP_001014694.1| eyeless, isoform C [Drosophila melanogaster]
gi|61677929|gb|AAX52513.1| eyeless, isoform C [Drosophila melanogaster]
Length = 857
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 418 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 477
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 478 FSNRRAKWRREEK 490
>gi|62473159|ref|NP_001014693.1| eyeless, isoform D [Drosophila melanogaster]
gi|61677928|gb|AAX52512.1| eyeless, isoform D [Drosophila melanogaster]
Length = 898
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 459 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 518
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 519 FSNRRAKWRREEK 531
>gi|158293967|ref|XP_315326.4| AGAP005311-PA [Anopheles gambiae str. PEST]
gi|157015346|gb|EAA11051.4| AGAP005311-PA [Anopheles gambiae str. PEST]
Length = 349
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 58/77 (75%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D D+D + R K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ LSEAR
Sbjct: 100 IDPMDNDPNDMGRPRKIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELAMRLDLSEAR 159
Query: 71 VQVWFQNRRAKFRRNER 87
VQVWFQNRRAK+R+ E+
Sbjct: 160 VQVWFQNRRAKWRKREK 176
>gi|26352187|dbj|BAC39730.1| unnamed protein product [Mus musculus]
Length = 320
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 111 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 170
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 171 QVWFQNRRAKWRKRER 186
>gi|210147371|ref|NP_001129718.1| uncharacterized protein LOC100192209 [Danio rerio]
gi|190336586|gb|AAI62065.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
gi|190336609|gb|AAI62456.1| Similar to Pax-family transcription factor 6.2 [Danio rerio]
Length = 270
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 11 CDGEDDDYD----YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
GE D+ D + + K K +RNRT+F Q++ALEK FERTHYPD F RE LA K+ L
Sbjct: 48 VQGERDEVDDSQLHLQLKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDL 107
Query: 67 SEARVQVWFQNRRAKFRRNER 87
EAR+QVWF NRRAK+RR E+
Sbjct: 108 PEARIQVWFSNRRAKWRREEK 128
>gi|410924614|ref|XP_003975776.1| PREDICTED: diencephalon/mesencephalon homeobox protein 1-A-like
[Takifugu rubripes]
Length = 387
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/111 (45%), Positives = 67/111 (60%), Gaps = 7/111 (6%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
Y + K RR+RT F + QL ALEK F++THYPD +RE LA L EARVQVWF+NRR
Sbjct: 59 YGSQHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAMCTNLPEARVQVWFKNRR 118
Query: 80 AKFRRNERNFIS---HRNLDAP----TSEQPLPPCTNATPLSSAPPSSSHS 123
AKFR+ +R+ + +AP + ++ PP T P PPS+S S
Sbjct: 119 AKFRKKQRSLQKEQLQKQKEAPGEGGSEKEDAPPSTTIIPDGQLPPSASSS 169
>gi|195117252|ref|XP_002003163.1| GI23866 [Drosophila mojavensis]
gi|193913738|gb|EDW12605.1| GI23866 [Drosophila mojavensis]
Length = 623
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+EARVQVWFQ
Sbjct: 61 DETFVRRKQ--RRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 118
Query: 77 NRRAKFRRNER 87
NRRAK+R+ ER
Sbjct: 119 NRRAKWRKAER 129
>gi|426230726|ref|XP_004009413.1| PREDICTED: retina and anterior neural fold homeobox protein 2 [Ovis
aries]
Length = 188
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 38 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 97
Query: 84 RNER 87
R ER
Sbjct: 98 RQER 101
>gi|410919965|ref|XP_003973454.1| PREDICTED: paired box protein Pax-7-like [Takifugu rubripes]
Length = 447
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Query: 4 DWMLTLRCDGEDDDYDYERR-----KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L +C+ DD D + K K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 187 DGILGDKCNRIDDGSDVDSEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 246
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRRN 85
ELA++ L+EARVQVWF NRRA++R+
Sbjct: 247 ELAQRTKLTEARVQVWFSNRRARWRKQ 273
>gi|449272667|gb|EMC82474.1| ALX homeobox protein 1 [Columba livia]
Length = 326
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>gi|71997306|ref|NP_492246.2| Protein CEH-8 [Caenorhabditis elegans]
gi|68056712|sp|Q94398.3|HM08_CAEEL RecName: Full=Homeobox protein ceh-8
gi|60222935|emb|CAB03519.2| Protein CEH-8 [Caenorhabditis elegans]
Length = 276
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF + QL+ALE F++THYPD + RE LA KV L E RVQVWFQNRRAKFRR
Sbjct: 59 KQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQ 118
Query: 86 ER 87
E+
Sbjct: 119 EK 120
>gi|397497244|ref|XP_003819424.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Pan paniscus]
Length = 211
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|351695035|gb|EHA97953.1| Paired mesoderm homeobox protein 2B [Heterocephalus glaber]
Length = 300
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>gi|344252001|gb|EGW08105.1| ALX homeobox protein 1 [Cricetulus griseus]
Length = 295
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 86 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 145
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 146 QVWFQNRRAKWRKRER 161
>gi|449271634|gb|EMC81918.1| Homeobox protein aristaless-like 3, partial [Columba livia]
Length = 72
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 1 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 60
Query: 84 RNER 87
+ ER
Sbjct: 61 KRER 64
>gi|432924264|ref|XP_004080546.1| PREDICTED: paired box protein Pax-6-like [Oryzias latipes]
Length = 290
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R +GE+ + ++ K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L EA
Sbjct: 62 RDEGEESQLRLQLKR-KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEA 120
Query: 70 RVQVWFQNRRAKFRRNER 87
R+QVWF NRRAK+RR E+
Sbjct: 121 RIQVWFSNRRAKWRREEK 138
>gi|402479293|gb|AFQ55891.1| RAX homeobox protein [Branchiostoma floridae]
Length = 318
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 52/67 (77%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRA
Sbjct: 133 EDMKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELAMKINLPEVRVQVWFQNRRA 192
Query: 81 KFRRNER 87
K+RR E+
Sbjct: 193 KWRRQEK 199
>gi|440910593|gb|ELR60376.1| Homeobox protein ARX [Bos grunniens mutus]
Length = 503
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 253 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 312
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 313 DLTEARVQVWFQNRRAKWRKREK 335
>gi|348509488|ref|XP_003442280.1| PREDICTED: paired box protein Pax-6-like isoform 3 [Oreochromis
niloticus]
Length = 457
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 228 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 287
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 288 LPEARIQVWFSNRRAKWRREEK 309
>gi|328703501|ref|XP_003242223.1| PREDICTED: retinal homeobox protein Rx1-like [Acyrthosiphon pisum]
Length = 302
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 10 RCDGEDDDYDYERRKP-KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
R D DDD KP K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ LSE
Sbjct: 51 RSDEHDDD------KPRKVRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSE 104
Query: 69 ARVQVWFQNRRAKFRRNERNF 89
ARVQVWFQNRRAK+R+ E++
Sbjct: 105 ARVQVWFQNRRAKWRKREKSM 125
>gi|313228402|emb|CBY23553.1| unnamed protein product [Oikopleura dioica]
Length = 280
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F Q++ALE +FE+THYPDAF+REEL++ + LSEARVQVWFQNR
Sbjct: 77 DLSKDKQKQRRSRTNFTMEQIHALESLFEQTHYPDAFMREELSQNLGLSEARVQVWFQNR 136
Query: 79 RAKFRRNE 86
RAK R+ E
Sbjct: 137 RAKSRKQE 144
>gi|146325675|sp|A1YG25.1|RAX2_PANPA RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|121483898|gb|ABM54250.1| MGC15631 [Pan paniscus]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|12643549|sp|O18381.3|PAX6_DROME RecName: Full=Paired box protein Pax-6; AltName: Full=Protein
eyeless
Length = 857
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 418 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 477
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 478 FSNRRAKWRREEK 490
>gi|56694806|gb|AAW23065.1| Rx, partial [Oikopleura dioica]
Length = 156
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF + QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 45 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 104
Query: 84 RNER 87
R E+
Sbjct: 105 RQEK 108
>gi|321464778|gb|EFX75784.1| twin of eyeless [Daphnia pulex]
Length = 473
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D R K K +RNRT+F + Q+ +LEK FERTHYPD F RE LA+K+ L EAR+Q
Sbjct: 238 GDEDPQMRLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAEKIGLPEARIQ 297
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 298 VWFSNRRAKWRREEK 312
>gi|291230672|ref|XP_002735289.1| PREDICTED: dorsal root ganglia homeobox-like [Saccoglossus
kowalevskii]
Length = 310
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+EARVQVW
Sbjct: 39 DFDDSFARRKQ--RRNRTTFTLQQLEELENAFAKTHYPDVFTREDLAMKINLTEARVQVW 96
Query: 75 FQNRRAKFRRNER 87
FQNRRAK+R+ ER
Sbjct: 97 FQNRRAKWRKMER 109
>gi|194768292|ref|XP_001966246.1| GF22818 [Drosophila ananassae]
gi|190618548|gb|EDV34072.1| GF22818 [Drosophila ananassae]
Length = 900
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 54/80 (67%)
Query: 8 TLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
T +DD K K +RNRT+F + Q++ LEK FERTHYPD F RE LA K+ L
Sbjct: 450 TSNVGNSEDDQARLILKRKLQRNRTSFTNEQIDNLEKEFERTHYPDVFARERLAGKIGLP 509
Query: 68 EARVQVWFQNRRAKFRRNER 87
EAR+QVWF NRRAK+RR E+
Sbjct: 510 EARIQVWFSNRRAKWRREEK 529
>gi|125490351|ref|NP_001074956.1| retina and anterior neural fold homeobox protein 2 [Pan
troglodytes]
gi|146325676|sp|A2T711.1|RAX2_PANTR RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|124111168|gb|ABM91966.1| MGC15631 [Pan troglodytes]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|444731497|gb|ELW71850.1| Paired mesoderm homeobox protein 2A [Tupaia chinensis]
Length = 317
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 155 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 214
Query: 84 RNER 87
+ ER
Sbjct: 215 KQER 218
>gi|357609290|gb|EHJ66384.1| eyeless [Danaus plexippus]
Length = 334
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D+D R K K +RNRT+F + Q++ LE+ FERTHYPD F RE LA K+ L EAR+Q
Sbjct: 125 GADEDAARLRLKRKLQRNRTSFTNEQIDNLEREFERTHYPDVFARERLAAKIGLPEARIQ 184
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR E+
Sbjct: 185 VWFSNRRAKWRREEK 199
>gi|339259158|ref|XP_003369765.1| homeobox protein SMOX-3 [Trichinella spiralis]
gi|316965991|gb|EFV50627.1| homeobox protein SMOX-3 [Trichinella spiralis]
Length = 395
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 51/65 (78%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR RTTF S QL LEK F+ THYPD + REE+A K+ L+EARVQVWFQNRRAKFR+
Sbjct: 293 KQRRIRTTFTSSQLKELEKAFQATHYPDIYTREEIAFKIDLTEARVQVWFQNRRAKFRKQ 352
Query: 86 ERNFI 90
E++ I
Sbjct: 353 EKSRI 357
>gi|53791211|dbj|BAD54702.1| transcription factor [Rattus norvegicus]
Length = 281
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 85 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 143 AKFRKQER 150
>gi|317419326|emb|CBN81363.1| Paired box gene 6b [Dicentrarchus labrax]
Length = 276
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R +GE+ + ++ K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L EA
Sbjct: 61 RDEGEESQLRLQLKR-KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEA 119
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNA 110
R+QVWF NRRAK+RR E+ R+ + Q P T +
Sbjct: 120 RIQVWFSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLTTS 160
>gi|313234331|emb|CBY10398.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF + QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+R
Sbjct: 129 KKKHRRNRTTFTTFQLHELERAFEKSHYPDVYAREELATKISLPEVRVQVWFQNRRAKWR 188
Query: 84 RNER 87
R E+
Sbjct: 189 RQEK 192
>gi|195586621|ref|XP_002083072.1| GD11918 [Drosophila simulans]
gi|194195081|gb|EDX08657.1| GD11918 [Drosophila simulans]
Length = 427
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+ EDD + K K RR+RTTF++ Q++ALE++F RT YPD + REELA+ L+EARV
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPS 119
QVWF NRRA+ R+ N +S P ATP +SA P+
Sbjct: 230 QVWFSNRRARLRK-------QLNTQQVSSFAPTSTSYGATPTTSAAPA 270
>gi|14249388|ref|NP_116142.1| retina and anterior neural fold homeobox protein 2 [Homo sapiens]
gi|426386636|ref|XP_004059789.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Gorilla gorilla gorilla]
gi|74760880|sp|Q96IS3.1|RAX2_HUMAN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|13938311|gb|AAH07284.1| RAX2 protein [Homo sapiens]
gi|17511706|gb|AAH18709.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|21619116|gb|AAH32512.1| Retina and anterior neural fold homeobox 2 [Homo sapiens]
gi|32395648|gb|AAP41547.1| Q50-type retinal homeobox [Homo sapiens]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|56694802|gb|AAW23063.1| Shox, partial [Oikopleura dioica]
Length = 249
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F Q++ALE +FE+THYPDAF+REEL++ + LSEARVQVWFQNR
Sbjct: 46 DLSKDKQKQRRSRTNFTMEQIHALESLFEQTHYPDAFMREELSQNLGLSEARVQVWFQNR 105
Query: 79 RAKFRRNE 86
RAK R+ E
Sbjct: 106 RAKSRKQE 113
>gi|149068721|gb|EDM18273.1| paired-like homeobox 2a [Rattus norvegicus]
Length = 281
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 85 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 143 AKFRKQER 150
>gi|6679399|ref|NP_032913.1| paired mesoderm homeobox protein 2A [Mus musculus]
gi|6093752|sp|Q62066.1|PHX2A_MOUSE RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=Aristaless homeobox protein homolog; AltName:
Full=PHOX2A homeodomain protein; AltName:
Full=Paired-like homeobox 2A
gi|402642|emb|CAA52923.1| Phox2 homeodomain protein [Mus musculus]
gi|225000420|gb|AAI72722.1| Paired-like homeobox 2a [synthetic construct]
gi|225000566|gb|AAI72615.1| Paired-like homeobox 2a [synthetic construct]
Length = 280
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 85 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 142
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 143 AKFRKQER 150
>gi|348528188|ref|XP_003451600.1| PREDICTED: short stature homeobox protein-like isoform 1
[Oreochromis niloticus]
Length = 285
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 6/97 (6%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 97 EDEDA---QGKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 153
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNA 110
WFQNRRAK R+ E H+ + S PL C A
Sbjct: 154 WFQNRRAKCRKQENQM--HKGV-ILGSGSPLDACRVA 187
>gi|312080137|ref|XP_003142472.1| hypothetical protein LOAG_06889 [Loa loa]
Length = 127
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D ++D R K K +RNRT+F+ Q+ ALEK FERTHYPD F RE LA K+ L EAR+
Sbjct: 17 DPDEDAAARMRLKRKLQRNRTSFSQEQIEALEKEFERTHYPDVFARERLATKIGLPEARI 76
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 77 QVWFSNRRAKWRREEK 92
>gi|291384330|ref|XP_002708569.1| PREDICTED: paired-like homeobox 2a-like [Oryctolagus cuniculus]
Length = 290
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 92 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 151
Query: 84 RNER 87
+ ER
Sbjct: 152 KQER 155
>gi|443692131|gb|ELT93804.1| hypothetical protein CAPTEDRAFT_169576 [Capitella teleta]
Length = 355
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 71/112 (63%), Gaps = 13/112 (11%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D+D D R K RR+RTTF ++QL+ LE+ FE+T YPD F REELA ++ LSEARVQVW
Sbjct: 119 DNDEDRPR---KIRRSRTTFTTYQLHQLERAFEKTQYPDVFTREELALRLDLSEARVQVW 175
Query: 75 FQNRRAKFRRNER-------NFIS-HRNLDAPTSEQP--LPPCTNATPLSSA 116
FQNRRAK+R+ E+ F+ R D P+ P LP T PL +A
Sbjct: 176 FQNRRAKWRKREKMLGRESPTFLGPDRPTDIPSLLGPVSLPIPTGPDPLLAA 227
>gi|148697792|gb|EDL29739.1| aristaless related homeobox gene (Drosophila) [Mus musculus]
Length = 378
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 122 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 181
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 182 DLTEARVQVWFQNRRAKWRKREK 204
>gi|4426551|dbj|BAA20936.1| mdkPax-6 [Oryzias sp.]
Length = 213
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 62 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 121
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 122 LPEARIQVWFSNRRAKWRREEK 143
>gi|224042664|ref|XP_002195184.1| PREDICTED: homeobox protein ARX [Taeniopygia guttata]
Length = 509
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + +RK RR RTTF S+QL LE+ F++THYPD F REELA ++ L+EARVQ
Sbjct: 263 GSDSEEGLLKRKQ--RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 320
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ E+
Sbjct: 321 VWFQNRRAKWRKREK 335
>gi|32880216|ref|NP_872594.1| retina and anterior neural fold homeobox protein 2 [Bos taurus]
gi|75046044|sp|Q7YRX0.1|RAX2_BOVIN RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Q50-type retinal homeobox protein;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|32395646|gb|AAP41546.1| Q50-type retinal homeobox [Bos taurus]
gi|296485724|tpg|DAA27839.1| TPA: retina and anterior neural fold homeobox protein 2 [Bos
taurus]
gi|440905907|gb|ELR56224.1| Retina and anterior neural fold homeobox protein 2 [Bos grunniens
mutus]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|146325674|sp|A1YEV8.1|RAX2_GORGO RecName: Full=Retina and anterior neural fold homeobox protein 2;
AltName: Full=Retina and anterior neural fold
homeobox-like protein 1
gi|120974352|gb|ABM46676.1| MGC15631 [Gorilla gorilla]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|148684574|gb|EDL16521.1| paired-like homeobox 2a [Mus musculus]
Length = 263
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 68 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 125
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 126 AKFRKQER 133
>gi|78370180|gb|ABB43131.1| Pax-6 [Daphnia pulex]
Length = 469
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
DDD R K K +RNRT+F + Q+ +LEK FERTHYPD F RE LA K+ EAR+QVW
Sbjct: 259 DDDQARLRLKRKLQRNRTSFTNEQIESLEKEFERTHYPDVFARERLAAKIGSPEARIQVW 318
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 319 FSNRRAKWRREEK 331
>gi|46249382|ref|NP_005160.2| paired mesoderm homeobox protein 2A [Homo sapiens]
gi|297689630|ref|XP_002822248.1| PREDICTED: paired mesoderm homeobox protein 2A [Pongo abelii]
gi|77416873|sp|O14813.2|PHX2A_HUMAN RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|27371330|gb|AAH41564.1| Paired-like homeobox 2a [Homo sapiens]
gi|119595262|gb|EAW74856.1| paired-like (aristaless) homeobox 2a [Homo sapiens]
gi|158254722|dbj|BAF83334.1| unnamed protein product [Homo sapiens]
gi|167773113|gb|ABZ91991.1| paired-like homeobox 2a [synthetic construct]
Length = 284
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|389614437|dbj|BAM20266.1| aristaless, partial [Papilio xuthus]
Length = 80
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR+QVWFQNRRAK+R
Sbjct: 5 KRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQVWFQNRRAKWR 64
Query: 84 RNER 87
+ E+
Sbjct: 65 KQEK 68
>gi|402894541|ref|XP_003910413.1| PREDICTED: paired mesoderm homeobox protein 2A [Papio anubis]
Length = 284
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|335282410|ref|XP_003354059.1| PREDICTED: retina and anterior neural fold homeobox protein 2-like
[Sus scrofa]
Length = 203
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 43 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 102
Query: 84 RNER 87
R ER
Sbjct: 103 RQER 106
>gi|308497871|ref|XP_003111122.1| CRE-CEH-8 protein [Caenorhabditis remanei]
gi|308240670|gb|EFO84622.1| CRE-CEH-8 protein [Caenorhabditis remanei]
Length = 283
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ALE F+++HYPD + RE LA KV L E RVQVWFQNRRAKFRR
Sbjct: 67 KQRRNRTTFTTYQLHALEAAFDKSHYPDVYARETLASKVSLPEVRVQVWFQNRRAKFRRQ 126
Query: 86 ER 87
E+
Sbjct: 127 EK 128
>gi|297703116|ref|XP_002828498.1| PREDICTED: retina and anterior neural fold homeobox protein 2
isoform 2 [Pongo abelii]
Length = 184
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|2583019|gb|AAB82744.1| ARIX homeodomain protein [Homo sapiens]
Length = 284
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|395814903|ref|XP_003780977.1| PREDICTED: paired mesoderm homeobox protein 2A [Otolemur garnettii]
Length = 284
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|440907876|gb|ELR57965.1| Paired mesoderm homeobox protein 2A, partial [Bos grunniens mutus]
Length = 155
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 88 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 147
Query: 84 RNER 87
+ ER
Sbjct: 148 KQER 151
>gi|328802691|ref|NP_001179086.1| paired mesoderm homeobox protein 2A [Bos taurus]
gi|296479851|tpg|DAA21966.1| TPA: paired-like homeobox 2a-like [Bos taurus]
Length = 284
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|28573684|ref|NP_788420.1| homeobrain [Drosophila melanogaster]
gi|28380639|gb|AAF46642.3| homeobrain [Drosophila melanogaster]
gi|66571176|gb|AAY51553.1| IP01393p [Drosophila melanogaster]
gi|220943354|gb|ACL84220.1| hbn-PA [synthetic construct]
gi|220953324|gb|ACL89205.1| hbn-PA [synthetic construct]
Length = 409
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 134 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 192
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 193 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 238
>gi|441656477|ref|XP_004091120.1| PREDICTED: retina and anterior neural fold homeobox protein 2
[Nomascus leucogenys]
Length = 184
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>gi|9967884|emb|CAC06429.1| homeobrain protein [Drosophila melanogaster]
Length = 409
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 134 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 192
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 193 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 238
>gi|431898078|gb|ELK06781.1| Paired mesoderm homeobox protein 2A [Pteropus alecto]
Length = 284
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|16758738|ref|NP_446321.1| paired mesoderm homeobox protein 2A [Rattus norvegicus]
gi|8134639|sp|Q62782.1|PHX2A_RAT RecName: Full=Paired mesoderm homeobox protein 2A; AltName:
Full=ARIX1 homeodomain protein; AltName: Full=Aristaless
homeobox protein homolog; AltName: Full=Paired-like
homeobox 2A
gi|1002494|gb|AAB04168.1| Arix1 homeodomain protein [Rattus norvegicus]
Length = 281
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|301615106|ref|XP_002937019.1| PREDICTED: short stature homeobox protein-like [Xenopus (Silurana)
tropicalis]
Length = 290
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 105 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 161
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T
Sbjct: 162 WFQNRRAKCRKQENQM--HKGVILGTG 186
>gi|313221602|emb|CBY36091.1| unnamed protein product [Oikopleura dioica]
Length = 249
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F Q++ALE +FE+THYPDAF+REEL++ + LSEARVQVWFQNR
Sbjct: 77 DLSKDKQKQRRSRTNFTMEQIHALESLFEQTHYPDAFMREELSQNLGLSEARVQVWFQNR 136
Query: 79 RAKFRRNE 86
RAK R+ E
Sbjct: 137 RAKSRKQE 144
>gi|320544499|ref|NP_001097075.2| CG34340 [Drosophila melanogaster]
gi|116875717|gb|ABK30908.1| IP09201p [Drosophila melanogaster]
gi|318068302|gb|ABV53614.2| CG34340 [Drosophila melanogaster]
Length = 587
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+EARVQVWFQ
Sbjct: 44 DETFVRRKQ--RRNRTTFTLQQLEELETAFAQTHYPDVFTREDLAMKINLTEARVQVWFQ 101
Query: 77 NRRAKFRRNER 87
NRRAK+R+ ER
Sbjct: 102 NRRAKWRKAER 112
>gi|327266940|ref|XP_003218261.1| PREDICTED: short stature homeobox protein 2-like [Anolis
carolinensis]
Length = 167
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 42 DEGQAKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 101
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ----PLPPCTNATPLSSAPPSSSHSFDFCAM 129
RAK R+ E H+ + + Q + P N L P H C +
Sbjct: 102 RAKCRKQENQL--HKGVLIGAASQFEACRVAPYVNVGALRM--PFQQHGELMCCL 152
>gi|301782575|ref|XP_002926705.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein ARX-like
[Ailuropoda melanoleuca]
Length = 459
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 263 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 322
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 323 DLTEARVQVWFQNRRAKWRKREK 345
>gi|341877445|gb|EGT33380.1| CBN-CEH-8 protein [Caenorhabditis brenneri]
Length = 289
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF + QL+ALE F++THYPD + RE LA KV L E RVQVWFQNRRAKFRR
Sbjct: 69 KQRRNRTTFTTFQLHALEAAFDKTHYPDVYAREALALKVQLPEVRVQVWFQNRRAKFRRQ 128
Query: 86 ER 87
E+
Sbjct: 129 EK 130
>gi|984800|gb|AAA75363.1| Pax-6 [Paracentrotus lividus]
Length = 442
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 15 DDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+DD D + R K K +RNRT+F + Q+ LEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 205 EDDEDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARI 264
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 265 QVWFSNRRAKWRREEK 280
>gi|322788141|gb|EFZ13923.1| hypothetical protein SINV_02746 [Solenopsis invicta]
Length = 401
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QL LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 213 KQRRSRTNFTIEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 272
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAP 117
E H+ + P P T P AP
Sbjct: 273 ESQL--HKGVAGSMVLAPRSPPTTLEPCRVAP 302
>gi|397489578|ref|XP_003815802.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein 2A
[Pan paniscus]
Length = 221
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 80 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 139
Query: 84 RNER 87
+ ER
Sbjct: 140 KQER 143
>gi|344296919|ref|XP_003420149.1| PREDICTED: LOW QUALITY PROTEIN: paired mesoderm homeobox protein
2A-like [Loxodonta africana]
Length = 262
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 66 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 125
Query: 84 RNER 87
+ ER
Sbjct: 126 KQER 129
>gi|313234194|emb|CBY10262.1| unnamed protein product [Oikopleura dioica]
Length = 444
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 9/93 (9%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D K K RR+RTTF+++QL+ LEK FERTHYPD + REELA + LSEARVQV
Sbjct: 153 EDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQV 212
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPP 106
WF NRRA++R + + A PLPP
Sbjct: 213 WFSNRRARWR---------KQMTASQITGPLPP 236
>gi|440808050|gb|AGC24168.1| Phox2 [Aplysia californica]
Length = 329
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D E+RK RR RTTF S QL LEK F THYPD + REE+A K L+EARVQ
Sbjct: 123 GHDSSVSPEKRKQ--RRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKTDLTEARVQ 180
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAKFR+ ER
Sbjct: 181 VWFQNRRAKFRKMER 195
>gi|73988195|ref|XP_542326.2| PREDICTED: paired mesoderm homeobox protein 2A [Canis lupus
familiaris]
Length = 284
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|335294428|ref|XP_003357226.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Sus scrofa]
Length = 286
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|149719311|ref|XP_001499207.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Equus
caballus]
Length = 284
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 87 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 146
Query: 84 RNER 87
+ ER
Sbjct: 147 KQER 150
>gi|18202029|sp|O35750.2|SHOX2_RAT RecName: Full=Short stature homeobox protein 2; AltName:
Full=Paired family homeodomain protein Prx3
Length = 237
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 38 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 97
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ----PLPPCTNATPLSSAPPSSSH----SFDFCAMP 130
RAK R+ E H+ + + Q + P N L SH F
Sbjct: 98 RAKCRKQENQL--HKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPLSFQVQA 155
Query: 131 HSQCNSTC 138
H Q +S
Sbjct: 156 HVQLDSAV 163
>gi|351698231|gb|EHB01150.1| Paired mesoderm homeobox protein 2A, partial [Heterocephalus
glaber]
Length = 70
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 7 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 66
Query: 84 RNER 87
+ ER
Sbjct: 67 KQER 70
>gi|56714087|gb|AAW24014.1| homeodomain protein Pax37b [Oikopleura dioica]
Length = 444
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 9/93 (9%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D K K RR+RTTF+++QL+ LEK FERTHYPD + REELA + LSEARVQV
Sbjct: 153 EDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQV 212
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPP 106
WF NRRA++R + + A PLPP
Sbjct: 213 WFSNRRARWR---------KQMTASQITGPLPP 236
>gi|390349964|ref|XP_003727316.1| PREDICTED: paired box protein Pax-6-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 15 DDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+DD D + R K K +RNRT+F + Q+ LEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 31 EDDEDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARI 90
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 91 QVWFSNRRAKWRREEK 106
>gi|209489273|gb|ACI49051.1| hypothetical protein Cbre_JD08.003 [Caenorhabditis brenneri]
Length = 290
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF + QL+ALE F++THYPD + RE LA KV L E RVQVWFQNRRAKFRR
Sbjct: 69 KQRRNRTTFTTFQLHALEAAFDKTHYPDVYAREALALKVQLPEVRVQVWFQNRRAKFRRQ 128
Query: 86 ER 87
E+
Sbjct: 129 EK 130
>gi|395744635|ref|XP_002823601.2| PREDICTED: ALX homeobox protein 1-like, partial [Pongo abelii]
Length = 220
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARVQVWFQNRRAK+R+
Sbjct: 131 KKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARVQVWFQNRRAKWRKR 190
Query: 86 ER 87
ER
Sbjct: 191 ER 192
>gi|32816237|gb|AAP88434.1| PaxB homeobox protein [Nematostella vectensis]
Length = 298
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 1/75 (1%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E DD + +R K RR RT F Q+ LEKVFE+THYPD F REELA++V LSEAR+QV
Sbjct: 206 EGDDPNSQRSK-MSRRQRTNFTDEQIEKLEKVFEKTHYPDVFTREELAQQVNLSEARIQV 264
Query: 74 WFQNRRAKFRRNERN 88
WF NRRAK+R+ ++
Sbjct: 265 WFSNRRAKWRKEGKD 279
>gi|348502261|ref|XP_003438687.1| PREDICTED: paired box protein Pax-6-like [Oreochromis niloticus]
Length = 276
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 1/78 (1%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R +GE+ + ++ K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L EA
Sbjct: 62 RDEGEESQLRLQLKR-KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEA 120
Query: 70 RVQVWFQNRRAKFRRNER 87
R+QVWF NRRAK+RR E+
Sbjct: 121 RIQVWFSNRRAKWRREEK 138
>gi|291409907|ref|XP_002721242.1| PREDICTED: short stature homeobox-like [Oryctolagus cuniculus]
Length = 392
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 53/61 (86%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
+ RR+RT F++ QL ALE++FE THYPDAF+REEL++++ LSEARVQVWFQNRRAK R+
Sbjct: 222 RQRRSRTNFSAEQLRALERLFEETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQ 281
Query: 86 E 86
E
Sbjct: 282 E 282
>gi|6981534|ref|NP_037160.1| short stature homeobox protein 2 [Rattus norvegicus]
gi|2632117|emb|CAA05284.1| Prx3A'' [Rattus norvegicus]
Length = 233
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 34 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 93
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ----PLPPCTNATPLSSAPPSSSH----SFDFCAMP 130
RAK R+ E H+ + + Q + P N L SH F
Sbjct: 94 RAKCRKQENQL--HKGVLIGAASQFEACRVAPYVNVGALRMPFQQDSHCNVTPLSFQVQA 151
Query: 131 HSQCNSTC 138
H Q +S
Sbjct: 152 HVQLDSAV 159
>gi|301783553|ref|XP_002927192.1| PREDICTED: paired mesoderm homeobox protein 2A-like [Ailuropoda
melanoleuca]
Length = 179
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 72 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 131
Query: 84 RNER 87
+ ER
Sbjct: 132 KQER 135
>gi|58396715|gb|AAW72797.1| paired-related homeobox protein Prx, partial [Perionyx excavatus]
Length = 53
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 48/52 (92%)
Query: 28 RRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
RRN TTFNS QL ALE+VFERTHYPDAF+REELA++V LSEA+VQVWFQNRR
Sbjct: 2 RRNSTTFNSQQLVALERVFERTHYPDAFIREELARRVNLSEAKVQVWFQNRR 53
>gi|313240394|emb|CBY32733.1| unnamed protein product [Oikopleura dioica]
Length = 468
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 9/93 (9%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D K K RR+RTTF+++QL+ LEK FERTHYPD + REELA + LSEARVQV
Sbjct: 177 EDEDEVNLPLKRKQRRSRTTFSANQLDELEKCFERTHYPDIYTREELAGRTGLSEARVQV 236
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTSEQPLPP 106
WF NRRA++R + + A PLPP
Sbjct: 237 WFSNRRARWR---------KQMTASQITGPLPP 260
>gi|194881732|ref|XP_001974975.1| GG20821 [Drosophila erecta]
gi|190658162|gb|EDV55375.1| GG20821 [Drosophila erecta]
Length = 416
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 141 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 199
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 200 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 245
>gi|344308172|ref|XP_003422752.1| PREDICTED: short stature homeobox protein-like [Loxodonta africana]
Length = 291
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 100 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 158
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 159 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 187
>gi|426219373|ref|XP_004003900.1| PREDICTED: short stature homeobox protein 2 [Ovis aries]
Length = 321
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 122 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 182 RAKCRKQENQL--HKGVLIGAASQ 203
>gi|195585242|ref|XP_002082398.1| GD25243 [Drosophila simulans]
gi|194194407|gb|EDX07983.1| GD25243 [Drosophila simulans]
Length = 411
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 136 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 194
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 195 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 240
>gi|195346245|ref|XP_002039676.1| GM15768 [Drosophila sechellia]
gi|194135025|gb|EDW56541.1| GM15768 [Drosophila sechellia]
Length = 407
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 132 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 190
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 191 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 236
>gi|6094305|sp|Q26602.1|SMOX3_SCHMA RecName: Full=Homeobox protein SMOX-3
gi|552250|gb|AAA29930.1| paired-like homeodomain protein, partial [Schistosoma mansoni]
Length = 288
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 21/120 (17%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + RE+LA ++ L+EARVQVWFQNRRAKFR
Sbjct: 1 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQNRRAKFR 60
Query: 84 RNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQCNSTCTFTSP 143
+ ER + P T TP SS P + + H+ + TSP
Sbjct: 61 KTER---------------VIQPDTTTTPSSSIP------INMNNIEHNPSLTNVQLTSP 99
>gi|293631905|gb|ADE59459.1| paired box protein 6 [Metacrinus rotundus]
Length = 436
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 4/95 (4%)
Query: 13 GEDDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
GED+ + + R K K +RNRT+F Q+ LEK FERTHYPD F RE LA+K+ L EA
Sbjct: 197 GEDESDETQARLRLKRKLQRNRTSFTPQQIEELEKEFERTHYPDVFARERLAQKIDLPEA 256
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPL 104
R+QVWF NRRAK+RR E+ R D TS+ P+
Sbjct: 257 RIQVWFSNRRAKWRREEKLRNQRRQGDG-TSQSPV 290
>gi|281340522|gb|EFB16106.1| hypothetical protein PANDA_016951 [Ailuropoda melanoleuca]
Length = 172
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 74 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 133
Query: 84 RNER 87
+ ER
Sbjct: 134 KQER 137
>gi|219918516|emb|CAQ05991.1| retinal homeobox protein Rx [Dugesia japonica]
Length = 272
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+RR
Sbjct: 90 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQ 149
Query: 86 ER 87
E+
Sbjct: 150 EK 151
>gi|395840473|ref|XP_003793082.1| PREDICTED: short stature homeobox protein [Otolemur garnettii]
Length = 289
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 104 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 160
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 161 WFQNRRAKCRKQENQM--HKGVILGTA 185
>gi|345498243|ref|XP_001606522.2| PREDICTED: hypothetical protein LOC100122913 [Nasonia vitripennis]
Length = 422
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RR+RT F QL LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNRRAK R++
Sbjct: 232 KQRRSRTNFTLEQLAELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKH 291
Query: 86 ERNFISHRNLDAPTSEQPLPPCTNATPLSSAP 117
E H+ + P P T+ P AP
Sbjct: 292 ESQL--HKGVTGGMVLAPRSPPTSLEPCRVAP 321
>gi|259013476|ref|NP_001158481.1| dorsal root ganglia homeobox [Saccoglossus kowalevskii]
gi|197734655|gb|ACH73223.1| dorsal root ganglion homeobox protein [Saccoglossus kowalevskii]
Length = 328
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 49/63 (77%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF + QL LE F RTHYPD F RE+LA K+ L+EARVQVWFQNRRAK+R+
Sbjct: 55 KQRRNRTTFTAQQLEELESAFGRTHYPDVFTREDLAVKINLTEARVQVWFQNRRAKWRKT 114
Query: 86 ERN 88
E+
Sbjct: 115 EKG 117
>gi|345482144|ref|XP_001603519.2| PREDICTED: hypothetical protein LOC100119801 [Nasonia vitripennis]
Length = 461
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 56/80 (70%), Gaps = 5/80 (6%)
Query: 8 TLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
L GED + RRK RRNRTTF QL LE F +THYPD F RE+LA K+ L+
Sbjct: 82 ALHGVGEDS---FVRRKQ--RRNRTTFTLQQLEELESAFVQTHYPDVFTREDLAMKINLT 136
Query: 68 EARVQVWFQNRRAKFRRNER 87
EARVQVWFQNRRAK+R+++R
Sbjct: 137 EARVQVWFQNRRAKWRKSQR 156
>gi|260796221|ref|XP_002593103.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
gi|229278327|gb|EEN49114.1| Q50 paired-like homeodomain transcription factor [Branchiostoma
floridae]
Length = 383
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S+QL LE+ F +THYPD F REELA +V L+EARVQVWFQNRRAK+R
Sbjct: 176 KRKQRRYRTTFTSYQLEELERAFAKTHYPDVFTREELAMRVDLTEARVQVWFQNRRAKWR 235
Query: 84 RNER 87
+ E+
Sbjct: 236 KREK 239
>gi|195486706|ref|XP_002091619.1| GE13762 [Drosophila yakuba]
gi|194177720|gb|EDW91331.1| GE13762 [Drosophila yakuba]
Length = 412
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 137 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 195
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP PL
Sbjct: 196 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPL 241
>gi|41581181|emb|CAF02090.1| paired box protein 7 [Salmo salar]
Length = 519
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 4 DWMLTLRCDGEDDDYDYERR-----KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVRE 58
D +L + + D+ D E K K RR+RTTF + QL LEK FERTHYPD + RE
Sbjct: 205 DGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTHYPDIYTRE 264
Query: 59 ELAKKVCLSEARVQVWFQNRRAKFRR 84
ELA++ L+EARVQVWF NRRAK+R+
Sbjct: 265 ELAQRTKLTEARVQVWFSNRRAKWRK 290
>gi|256070449|ref|XP_002571555.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 415
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 21/120 (17%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+ F+ THYPD + RE+LA ++ L+EARVQVWFQNRRAKFR
Sbjct: 176 KRKQRRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQNRRAKFR 235
Query: 84 RNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPHSQCNSTCTFTSP 143
+ ER + P T TP SS P + + H+ + TSP
Sbjct: 236 KTER---------------VIQPDTTTTPSSSIP------INMNNIEHNPSLTNVQLTSP 274
>gi|195489908|ref|XP_002092937.1| GE14464 [Drosophila yakuba]
gi|194179038|gb|EDW92649.1| GE14464 [Drosophila yakuba]
Length = 427
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/115 (43%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+ EDD + K K RR+RTTF++ Q++ALE++F RT YPD + REELA+ L+EARV
Sbjct: 170 ESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLTEARV 229
Query: 72 QVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDF 126
QVWF NRRA+ R+ N S P ATP +SA P+ S
Sbjct: 230 QVWFSNRRARLRK-------QLNTQQVPSFAPTSTSYGATPTTSAAPAPSMGMSL 277
>gi|395512821|ref|XP_003760632.1| PREDICTED: retinal homeobox protein Rx1-like [Sarcophilus
harrisii]
Length = 208
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 56/78 (71%), Gaps = 2/78 (2%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R G + D ++K RRNRTTF + QL+ LE+ FER+HYPD + REELA +V L E
Sbjct: 14 RAPGSGEAEDAPKKKH--RRNRTTFTTFQLHQLERAFERSHYPDVYSREELATQVNLPEV 71
Query: 70 RVQVWFQNRRAKFRRNER 87
RVQVWFQNRRAK+RR E+
Sbjct: 72 RVQVWFQNRRAKWRRQEK 89
>gi|194747107|ref|XP_001955994.1| GF24980 [Drosophila ananassae]
gi|190623276|gb|EDV38800.1| GF24980 [Drosophila ananassae]
Length = 618
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ +GED + + +PK RRNRTTF+ QL+ LEK FE++HYP RE+LA + LSE
Sbjct: 352 IDIEGEDSE-SQDSDQPKFRRNRTTFSPEQLDELEKEFEKSHYPCVSTREKLAGRTALSE 410
Query: 69 ARVQVWFQNRRAKFRRNER-NFISHRN 94
ARVQVWF NRRAK+RR++R N + R+
Sbjct: 411 ARVQVWFSNRRAKWRRHQRVNLLKQRD 437
>gi|449490110|ref|XP_002193636.2| PREDICTED: uncharacterized protein LOC100219224 [Taeniopygia
guttata]
Length = 261
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 53/64 (82%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNRRAK+R
Sbjct: 175 KSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQVWFQNRRAKWR 234
Query: 84 RNER 87
+ ER
Sbjct: 235 KRER 238
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 72 QVWFQNRRAKFRRNER-NFISHRNLDAPTSEQPLPPCTNATP-LSSAPPSSSHSF 124
QVWFQNRRAK+R+ ER R L AP LPP + A+P +S PP++S+ F
Sbjct: 19 QVWFQNRRAKWRKRERCRTTRGRALGAPRGL--LPPESIASPCMSPYPPAASNGF 71
>gi|410988018|ref|XP_004000286.1| PREDICTED: short stature homeobox protein isoform 1 [Felis catus]
Length = 293
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 102 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 160
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 161 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 189
>gi|219918518|emb|CAQ05992.1| retinal homeobox protein Rx [Schmidtea mediterranea]
Length = 272
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+RR
Sbjct: 90 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQ 149
Query: 86 ER 87
E+
Sbjct: 150 EK 151
>gi|426369665|ref|XP_004051805.1| PREDICTED: paired mesoderm homeobox protein 2A [Gorilla gorilla
gorilla]
Length = 342
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 145 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 204
Query: 84 RNER 87
+ ER
Sbjct: 205 KQER 208
>gi|18202262|sp|O97039.1|RX_DUGJA RecName: Full=Retinal homeobox protein Rax; AltName: Full=DjRax
gi|4519627|dbj|BAA75673.1| Djrax [Dugesia japonica]
Length = 268
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+RR
Sbjct: 86 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQ 145
Query: 86 ER 87
E+
Sbjct: 146 EK 147
>gi|113195661|ref|NP_001037829.1| homeodomain protein Phox2 [Ciona intestinalis]
gi|106647225|gb|ABF82264.1| Phox2 [Ciona intestinalis]
Length = 154
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+ERRK RR RTTF S QL LEKVF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 41 HERRKQ--RRIRTTFTSSQLKELEKVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 98
Query: 80 AKFRRNER 87
AK+R+ ER
Sbjct: 99 AKWRKMER 106
>gi|195012802|ref|XP_001983750.1| GH16065 [Drosophila grimshawi]
gi|193897232|gb|EDV96098.1| GH16065 [Drosophila grimshawi]
Length = 605
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ +GED D + + +PK RRNRTTF+ QL+ LEK F+++HYP RE+LA + LSE
Sbjct: 375 IDIEGEDSDTE-DSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVGTREKLASRTMLSE 433
Query: 69 ARVQVWFQNRRAKFRRNER-NFISHRNLDAPTSEQPLPPCTNATPL 113
ARVQVWF NRRAK+RR++R N + R D+ + Q T PL
Sbjct: 434 ARVQVWFSNRRAKWRRHQRVNQLKQR--DSASESQTPAGATTTVPL 477
>gi|410972832|ref|XP_003992860.1| PREDICTED: paired mesoderm homeobox protein 2A, partial [Felis
catus]
Length = 273
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 2/68 (2%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRR
Sbjct: 74 HEKRKQ--RRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRR 131
Query: 80 AKFRRNER 87
AKFR+ ER
Sbjct: 132 AKFRKQER 139
>gi|187608131|ref|NP_001119883.1| short stature homeobox protein isoform 1 [Danio rerio]
Length = 285
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 99 EDEDA---QSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 155
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 156 WFQNRRAKCRKQENQM--HKGVILGTA 180
>gi|355559914|gb|EHH16642.1| hypothetical protein EGK_11961 [Macaca mulatta]
Length = 367
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 178 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 237
Query: 79 RAKFRRNERNF 89
RAK R+ E
Sbjct: 238 RAKCRKQENQL 248
>gi|114639252|ref|XP_001160733.1| PREDICTED: paired mesoderm homeobox protein 2A [Pan troglodytes]
Length = 234
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/64 (70%), Positives = 50/64 (78%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 37 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 96
Query: 84 RNER 87
+ ER
Sbjct: 97 KQER 100
>gi|786328|gb|AAB32671.1| Pax-6 [Rattus sp.]
gi|446399|prf||1911405A PAX-6 gene
Length = 269
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 96 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 155
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 156 LPEARIQVWFSNRRAKWRREEK 177
>gi|119331074|ref|NP_001073192.1| short stature homeobox protein [Gallus gallus]
gi|110559938|gb|ABG76207.1| Shox [Gallus gallus]
Length = 291
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 100 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 158
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 159 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 187
>gi|410988020|ref|XP_004000287.1| PREDICTED: short stature homeobox protein isoform 2 [Felis catus]
Length = 306
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 115 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 173
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 174 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 202
>gi|77748087|gb|AAI07619.1| Short stature homeobox [Danio rerio]
Length = 258
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 99 EDEDA---QSKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 155
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 156 WFQNRRAKCRKQENQM--HKGVILGTA 180
>gi|328717525|ref|XP_001950483.2| PREDICTED: retinal homeobox protein Rx2-like [Acyrthosiphon pisum]
Length = 300
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 65/104 (62%), Gaps = 7/104 (6%)
Query: 28 RRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNER 87
RR+RTTF QL LE F ++HYPD + REELA+ L+EAR+QVWFQNRRAK+R+ E+
Sbjct: 122 RRHRTTFTQEQLAELEAAFAKSHYPDIYCREELARSTKLNEARIQVWFQNRRAKYRKQEK 181
Query: 88 NFISHRNLDAPTSEQPLPPCTNATPLSSAPPSSSHSFDFCAMPH 131
+ L P+ LP C A + + PS+S ++ A PH
Sbjct: 182 QL--QKALAPPSM---LPGCNGAAMMRNIYPSASRTYQ--AYPH 218
>gi|311275890|ref|XP_003134961.1| PREDICTED: short stature homeobox protein-like isoform 1 [Sus
scrofa]
Length = 300
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 107 EDED---GQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 164 WFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|353230507|emb|CCD76678.1| homeobox protein smox-3 [Schistosoma mansoni]
Length = 901
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 61/98 (62%), Gaps = 17/98 (17%)
Query: 20 YERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRR 79
+E+RK RR RTTF S QL LE+ F+ THYPD + RE+LA ++ L+EARVQVWFQNRR
Sbjct: 608 HEKRKQ--RRIRTTFTSLQLKELERAFQETHYPDIYTREDLALRIDLTEARVQVWFQNRR 665
Query: 80 AKFRRNERNFISHRNLDAPTSEQPLPPCTNATPLSSAP 117
AKFR+ ER + P T TP SS P
Sbjct: 666 AKFRKTER---------------VIQPDTTTTPSSSIP 688
>gi|224043036|ref|XP_002198003.1| PREDICTED: short stature homeobox protein [Taeniopygia guttata]
Length = 291
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 100 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 158
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 159 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 187
>gi|80971566|gb|ABB52751.1| Pax-6, partial [Strongylocentrotus droebachiensis]
Length = 384
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Query: 15 DDDYDYERR---KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
+DD D + R K K +RNRT+F + Q+ LEK FERTHYPD F RE LA+K+ L EAR+
Sbjct: 178 EDDEDAQARLRLKRKLQRNRTSFTAQQIEELEKEFERTHYPDVFARERLAQKIDLPEARI 237
Query: 72 QVWFQNRRAKFRRNER 87
QVWF NRRAK+RR E+
Sbjct: 238 QVWFSNRRAKWRREEK 253
>gi|126337096|ref|XP_001362385.1| PREDICTED: short stature homeobox protein-like isoform 1
[Monodelphis domestica]
Length = 292
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 101 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 159
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 160 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|297709290|ref|XP_002831369.1| PREDICTED: short stature homeobox protein isoform 1 [Pongo abelii]
Length = 292
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 107 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 164 WFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|1616755|gb|AAC52831.1| OG-12b homeodomain protein, partial [Mus musculus]
Length = 198
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 12 DGEDDDYDYE---RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
D +DD E + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSE
Sbjct: 1 DRKDDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 60
Query: 69 ARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQ 102
ARVQVWFQNRRAK R+ E H+ + + Q
Sbjct: 61 ARVQVWFQNRRAKCRKQENQL--HKGVLIGAASQ 92
>gi|311275888|ref|XP_003134962.1| PREDICTED: short stature homeobox protein-like isoform 2 [Sus
scrofa]
Length = 292
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 107 EDED---GQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 164 WFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|198464863|ref|XP_002134862.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
gi|198149913|gb|EDY73489.1| GA23573 [Drosophila pseudoobscura pseudoobscura]
Length = 661
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 8 TLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLS 67
+ +GED + + +PK RRNRTTF+ QL+ LEK FE++HYP RE+LA + LS
Sbjct: 371 VIDIEGEDSE-SQDSDQPKFRRNRTTFSPEQLDELEKEFEKSHYPCVSTREKLAGRTALS 429
Query: 68 EARVQVWFQNRRAKFRRNER-NFISHRN 94
EARVQVWF NRRAK+RR++R N + R+
Sbjct: 430 EARVQVWFSNRRAKWRRHQRVNMLKQRD 457
>gi|443734928|gb|ELU18784.1| hypothetical protein CAPTEDRAFT_147353, partial [Capitella teleta]
Length = 116
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
E D + RRK RRNRTTF QL LEK F +THYPD F REELA ++ L+EARVQV
Sbjct: 39 ELQDDAFARRKQ--RRNRTTFTLQQLEELEKAFAQTHYPDVFTREELAMRINLTEARVQV 96
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+R++ER
Sbjct: 97 WFQNRRAKWRKSER 110
>gi|7335704|gb|AAC15711.2| PaxC transcription factor [Acropora millepora]
Length = 464
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G++D+ +K K RRNRTTF+ QL LEK FE++HYPD REELA K+ +SEARVQ
Sbjct: 310 GKEDNDVQANQKRKIRRNRTTFSPEQLEMLEKEFEKSHYPDVATREELASKIDMSEARVQ 369
Query: 73 VWFQNRRAKFRRNER 87
VWF NRRAK+RR+++
Sbjct: 370 VWFSNRRAKWRRHQK 384
>gi|327276026|ref|XP_003222772.1| PREDICTED: paired box protein Pax-6-like [Anolis carolinensis]
Length = 278
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 49/64 (76%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L EAR+QVWF NRRAK+R
Sbjct: 71 KRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWR 130
Query: 84 RNER 87
R E+
Sbjct: 131 REEK 134
>gi|4506943|ref|NP_000442.1| short stature homeobox protein isoform SHOXa [Homo sapiens]
gi|426394997|ref|XP_004063767.1| PREDICTED: short stature homeobox protein [Gorilla gorilla gorilla]
gi|6831676|sp|O15266.1|SHOX_HUMAN RecName: Full=Short stature homeobox protein; AltName:
Full=Pseudoautosomal homeobox-containing osteogenic
protein; AltName: Full=Short stature homeobox-containing
protein
gi|2463203|emb|CAA72299.1| SHOXa protein [Homo sapiens]
gi|3176736|gb|AAC18820.1| pseudoautosomal homeodomain-containing protein [Homo sapiens]
gi|119587220|gb|EAW66816.1| short stature homeobox, isoform CRA_b [Homo sapiens]
gi|119587221|gb|EAW66817.1| short stature homeobox, isoform CRA_b [Homo sapiens]
Length = 292
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 101 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 159
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 160 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|405969514|gb|EKC34482.1| Aristaless-related homeobox protein [Crassostrea gigas]
Length = 376
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 52/62 (83%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K +RNRTTF++ QL LEKVF +THYPD F+RE+LA K+ L E+R+QVWFQNRRAK+R+
Sbjct: 100 KSKRNRTTFSTKQLQELEKVFRKTHYPDVFLREKLASKIKLPESRIQVWFQNRRAKWRKR 159
Query: 86 ER 87
E+
Sbjct: 160 EK 161
>gi|292628755|ref|XP_002667096.1| PREDICTED: aristaless-related homeobox protein-like [Danio rerio]
Length = 385
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + +RK RR RTTF S+QL LE+ F++THYPD F REELA ++ L+EARVQ
Sbjct: 150 GSDTEDGMLKRKQ--RRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRLDLTEARVQ 207
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQP 103
VWFQNRRAK+R+ E+ + L S P
Sbjct: 208 VWFQNRRAKWRKREKVGVQPHTLSLHYSGAP 238
>gi|74203026|dbj|BAE26214.1| unnamed protein product [Mus musculus]
Length = 222
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 26 RKDDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 85
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQ 102
RVQVWFQNRRAK R+ E H+ + + Q
Sbjct: 86 RVQVWFQNRRAKCRKQENQL--HKGVLIGAASQ 116
>gi|410896364|ref|XP_003961669.1| PREDICTED: short stature homeobox protein-like isoform 2 [Takifugu
rubripes]
Length = 294
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 97 EDEDG---QGKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 153
Query: 74 WFQNRRAKFRRNE 86
WFQNRRAK R+ E
Sbjct: 154 WFQNRRAKCRKQE 166
>gi|395527040|ref|XP_003765660.1| PREDICTED: short stature homeobox protein isoform 2 [Sarcophilus
harrisii]
Length = 303
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 107 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 164 WFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|348526712|ref|XP_003450863.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Oreochromis niloticus]
Length = 289
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 102 DETQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 161
Query: 79 RAKFRRNERNF 89
RAK R+ E
Sbjct: 162 RAKCRKQENQL 172
>gi|2980872|emb|CAA05342.1| homeobox protein SHOTb [Homo sapiens]
Length = 190
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 3 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 62
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 63 RAKCRKQENQL--HKGVLIGAASQ 84
>gi|377685596|gb|AFB74467.1| RX, partial [Schmidtea polychroa]
Length = 199
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 51/62 (82%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF ++QL+ LE+ FE++HYPD + REELA K+ L E RVQVWFQNRRAK+RR
Sbjct: 38 KHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKISLPEVRVQVWFQNRRAKWRRQ 97
Query: 86 ER 87
E+
Sbjct: 98 EK 99
>gi|327268134|ref|XP_003218853.1| PREDICTED: short stature homeobox protein-like [Anolis
carolinensis]
Length = 308
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 123 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 179
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 180 WFQNRRAKCRKQENQM--HKGVILGTA 204
>gi|410909870|ref|XP_003968413.1| PREDICTED: short stature homeobox protein 2-like isoform 1
[Takifugu rubripes]
Length = 289
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 54/71 (76%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 102 DEAQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 161
Query: 79 RAKFRRNERNF 89
RAK R+ E
Sbjct: 162 RAKCRKQENQL 172
>gi|221114921|ref|XP_002157088.1| PREDICTED: uncharacterized protein LOC100211908 [Hydra
magnipapillata]
Length = 240
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 52/68 (76%)
Query: 25 PKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRR 84
PK RR RTTF QL+ LE +F +T YPD F+REE+AKK+ L+EARVQVWF+NRRAKFRR
Sbjct: 25 PKRRRERTTFTKAQLDVLEDMFGKTMYPDVFMREEVAKKINLAEARVQVWFKNRRAKFRR 84
Query: 85 NERNFISH 92
+ N H
Sbjct: 85 SRENPGRH 92
>gi|395527038|ref|XP_003765659.1| PREDICTED: short stature homeobox protein isoform 1 [Sarcophilus
harrisii]
Length = 292
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/87 (54%), Positives = 62/87 (71%), Gaps = 5/87 (5%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 107 EDEDG---QTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 163
Query: 74 WFQNRRAKFRRNERNFISHRNLDAPTS 100
WFQNRRAK R+ E H+ + T+
Sbjct: 164 WFQNRRAKCRKQENQM--HKGVILGTA 188
>gi|410896362|ref|XP_003961668.1| PREDICTED: short stature homeobox protein-like isoform 1 [Takifugu
rubripes]
Length = 282
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 3/73 (4%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
ED+D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQV
Sbjct: 97 EDEDG---QGKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQV 153
Query: 74 WFQNRRAKFRRNE 86
WFQNRRAK R+ E
Sbjct: 154 WFQNRRAKCRKQE 166
>gi|440895775|gb|ELR47885.1| Short stature homeobox protein 2, partial [Bos grunniens mutus]
Length = 291
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 89 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 148
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 149 RAKCRKQENQL--HKGVLIGAASQ 170
>gi|1616756|gb|AAC52832.1| OG-12a homeodomain protein, partial [Mus musculus]
Length = 210
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 63/94 (67%), Gaps = 5/94 (5%)
Query: 12 DGEDDDYDYE---RRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
D +DD E + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSE
Sbjct: 1 DRKDDAKGMEDEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSE 60
Query: 69 ARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQ 102
ARVQVWFQNRRAK R+ E H+ + + Q
Sbjct: 61 ARVQVWFQNRRAKCRKQENQL--HKGVLIGAASQ 92
>gi|410895927|ref|XP_003961451.1| PREDICTED: paired box protein Pax-6-like [Takifugu rubripes]
Length = 276
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D E+ + ++ K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+ L EA
Sbjct: 61 RDDAEESQLRLQLKR-KLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLANKIDLPEA 119
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNA 110
R+QVWF NRRAK+RR E+ R+ + Q P T +
Sbjct: 120 RIQVWFSNRRAKWRREEKLRNQRRSGGVTSCSQSQAPLTTS 160
>gi|296227718|ref|XP_002759505.1| PREDICTED: short stature homeobox protein 2 isoform 2 [Callithrix
jacchus]
Length = 331
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 132 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 191
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 192 RAKCRKQENQL--HKGVLIGAASQ 213
>gi|195153954|ref|XP_002017888.1| GL17416 [Drosophila persimilis]
gi|194113684|gb|EDW35727.1| GL17416 [Drosophila persimilis]
Length = 401
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 7 LTLRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCL 66
L+ + D D ER + K RR+RTTF + QL+ LE+ FE+T YPD F RE+LA ++ L
Sbjct: 123 LSSSLNNGHDLSDMERPR-KVRRSRTTFTTFQLHQLERAFEKTQYPDVFTREDLAMRLDL 181
Query: 67 SEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLPPCTNATPL 113
SEARVQVWFQNRRAK+R+ E+ F++ EQ LP P+
Sbjct: 182 SEARVQVWFQNRRAKWRKREK-FMNQDKAGYLLPEQGLPEFPLGIPM 227
>gi|426342664|ref|XP_004037956.1| PREDICTED: short stature homeobox protein 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 319
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 132 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 191
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 192 RAKCRKQENQL--HKGVLIGAASQ 213
>gi|62131821|gb|AAX68745.1| paired-like homeobox 2b [Danio rerio]
Length = 285
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR--VQVW 74
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EAR VQVW
Sbjct: 87 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVQVW 146
Query: 75 FQNRRAKFRRNER 87
FQNRRAKFR+ ER
Sbjct: 147 FQNRRAKFRKQER 159
>gi|89145413|ref|NP_006875.2| short stature homeobox protein 2 isoform a [Homo sapiens]
gi|109048538|ref|XP_001102416.1| PREDICTED: hypothetical protein LOC704327 isoform 2 [Macaca
mulatta]
gi|410037685|ref|XP_003950270.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
gi|145559528|sp|O60902.4|SHOX2_HUMAN RecName: Full=Short stature homeobox protein 2; AltName:
Full=Homeobox protein Og12X; AltName:
Full=Paired-related homeobox protein SHOT
gi|119599101|gb|EAW78695.1| hCG1786841, isoform CRA_a [Homo sapiens]
Length = 331
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 132 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 191
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 192 RAKCRKQENQL--HKGVLIGAASQ 213
>gi|440808052|gb|AGC24169.1| Phox2 [Sepia officinalis]
Length = 336
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LEK F THYPD + REE+A K+ L+EARVQVWFQNRRAKFR
Sbjct: 129 KRKQRRIRTTFTSAQLKELEKAFAETHYPDIYTREEIAMKIDLTEARVQVWFQNRRAKFR 188
Query: 84 RNER 87
+ ER
Sbjct: 189 KMER 192
>gi|402912573|ref|XP_003918830.1| PREDICTED: short stature homeobox protein-like [Papio anubis]
Length = 294
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 64/91 (70%), Gaps = 3/91 (3%)
Query: 10 RCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEA 69
R D + +D D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEA
Sbjct: 103 REDVKSEDEDGQT-KLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEA 161
Query: 70 RVQVWFQNRRAKFRRNERNFISHRNLDAPTS 100
RVQVWFQNRRAK R+ E H+ + T+
Sbjct: 162 RVQVWFQNRRAKCRKQENQM--HKGVILGTA 190
>gi|254750649|ref|NP_001157150.1| short stature homeobox protein 2 isoform c [Homo sapiens]
gi|332818202|ref|XP_003310112.1| PREDICTED: short stature homeobox protein 2 [Pan troglodytes]
Length = 319
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 132 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 191
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 192 RAKCRKQENQL--HKGVLIGAASQ 213
>gi|410971112|ref|XP_003992017.1| PREDICTED: short stature homeobox protein 2-like [Felis catus]
Length = 233
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D + K K RR+RT F QLN LE++F+ THYPDAF+REEL++++ LSEARVQVWFQNR
Sbjct: 34 DEGQTKIKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNR 93
Query: 79 RAKFRRNERNFISHRNLDAPTSEQ 102
RAK R+ E H+ + + Q
Sbjct: 94 RAKCRKQENQL--HKGVLIGAASQ 115
>gi|224049967|ref|XP_002188708.1| PREDICTED: paired mesoderm homeobox protein 2B [Taeniopygia
guttata]
Length = 187
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 49/64 (76%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQNRRAKFR
Sbjct: 95 KRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFR 154
Query: 84 RNER 87
+ R
Sbjct: 155 KYYR 158
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.131 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,386,655,017
Number of Sequences: 23463169
Number of extensions: 90227889
Number of successful extensions: 358409
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18523
Number of HSP's successfully gapped in prelim test: 980
Number of HSP's that attempted gapping in prelim test: 337336
Number of HSP's gapped (non-prelim): 21721
length of query: 143
length of database: 8,064,228,071
effective HSP length: 107
effective length of query: 36
effective length of database: 9,848,636,284
effective search space: 354550906224
effective search space used: 354550906224
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)