BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2123
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q90963|PRRX2_CHICK Paired mesoderm homeobox protein 2 (Fragment) OS=Gallus gallus
GN=PRRX2 PE=2 SV=1
Length = 165
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 64/82 (78%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 21 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 80
Query: 92 HRNLDAPTS-------EQPLPP 106
+R+ S EQP+ P
Sbjct: 81 NRSASLLKSYSQEAAIEQPMAP 102
>sp|Q99811|PRRX2_HUMAN Paired mesoderm homeobox protein 2 OS=Homo sapiens GN=PRRX2 PE=2
SV=2
Length = 253
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 73/110 (66%), Gaps = 18/110 (16%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 109 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 168
Query: 92 HRNLDAPTS-------EQPLPP-----------CTNATPLSSAPPSSSHS 123
R+ S EQP+ P T ++P S+ PP S S
Sbjct: 169 SRSASLLKSYSQEAAIEQPVAPRPTALSPDYLSWTASSPYSTVPPYSPGS 218
>sp|P63014|PRRX1_RAT Paired mesoderm homeobox protein 1 OS=Rattus norvegicus GN=Prrx1
PE=2 SV=1
Length = 245
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>sp|P63013|PRRX1_MOUSE Paired mesoderm homeobox protein 1 OS=Mus musculus GN=Prrx1 PE=2
SV=1
Length = 245
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>sp|P54821|PRRX1_HUMAN Paired mesoderm homeobox protein 1 OS=Homo sapiens GN=PRRX1 PE=1
SV=2
Length = 245
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 64/83 (77%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
++N D EQP+ P
Sbjct: 159 NKNASLLKSYSGDVTAVEQPIVP 181
>sp|Q05437|PRRX1_CHICK Paired mesoderm homeobox protein 1 OS=Gallus gallus GN=PRRX1 PE=1
SV=2
Length = 245
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%), Gaps = 8/83 (9%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVRE+LA++V L+EARVQVWFQNRRAKFRRNER ++
Sbjct: 99 TTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLA 158
Query: 92 HRNL--------DAPTSEQPLPP 106
+N D EQP+ P
Sbjct: 159 SKNASLLKSYSGDVTAVEQPIVP 181
>sp|Q06348|PRRX2_MOUSE Paired mesoderm homeobox protein 2 OS=Mus musculus GN=Prrx2 PE=2
SV=2
Length = 247
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 7/82 (8%)
Query: 32 TTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFIS 91
TTFNS QL ALE+VFERTHYPDAFVREELA++V LSEARVQVWFQNRRAKFRRNER ++
Sbjct: 103 TTFNSSQLQALERVFERTHYPDAFVREELARRVNLSEARVQVWFQNRRAKFRRNERAMLA 162
Query: 92 HRNLDAPTS-------EQPLPP 106
R+ S EQP+ P
Sbjct: 163 TRSASLLKSYGQEAAIEQPVAP 184
>sp|Q9I9D5|RX1_ASTFA Retinal homeobox protein Rx1 OS=Astyanax fasciatus GN=rx1 PE=2 SV=1
Length = 334
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 70/102 (68%), Gaps = 2/102 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 134 DEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 193
Query: 79 RAKFRRNERNFISHRNL-DAPTSEQPLPPC-TNATPLSSAPP 118
RAK+RR E+ S L D+P PP TN P+S++ P
Sbjct: 194 RAKWRRQEKMDASAVKLHDSPMLSFNRPPMHTNVGPMSNSLP 235
>sp|Q4LAL6|ALX4_BOVIN Homeobox protein aristaless-like 4 OS=Bos taurus GN=ALX4 PE=2 SV=1
Length = 397
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 192 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 251
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 252 RAKWRKRER 260
>sp|Q9PVX0|RX2_CHICK Retinal homeobox protein Rx2 OS=Gallus gallus GN=RX2 PE=2 SV=1
Length = 317
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
G+ D E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RV
Sbjct: 107 GGDGKPSDEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRV 166
Query: 72 QVWFQNRRAKFRRNERNFISHRNL-DAPT 99
QVWFQNRRAK+RR E+ +S L D+P
Sbjct: 167 QVWFQNRRAKWRRQEKLEVSSMKLQDSPI 195
>sp|Q9H161|ALX4_HUMAN Homeobox protein aristaless-like 4 OS=Homo sapiens GN=ALX4 PE=1
SV=2
Length = 411
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 206 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 265
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 266 RAKWRKRER 274
>sp|Q8BYH0|DRGX_MOUSE Dorsal root ganglia homeobox protein OS=Mus musculus GN=Drgx PE=1
SV=2
Length = 263
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>sp|A6NNA5|DRGX_HUMAN Dorsal root ganglia homeobox protein OS=Homo sapiens GN=DRGX PE=2
SV=1
Length = 263
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 16 DDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWF 75
D+D + K RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVWF
Sbjct: 22 GDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVWF 81
Query: 76 QNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
QNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 82 QNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>sp|O35137|ALX4_MOUSE Homeobox protein aristaless-like 4 OS=Mus musculus GN=Alx4 PE=1
SV=1
Length = 399
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 55/69 (79%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF S+QL LEKVF++THYPD + RE+LA + L+EARVQVWFQNR
Sbjct: 194 DSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNR 253
Query: 79 RAKFRRNER 87
RAK+R+ ER
Sbjct: 254 RAKWRKRER 262
>sp|O42356|RX1_DANRE Retinal homeobox protein Rx1 OS=Danio rerio GN=rx1 PE=2 SV=2
Length = 330
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 76/136 (55%), Gaps = 22/136 (16%)
Query: 6 MLTLRCDGEDDDY--------------DYERRKPKPRRNRTTFNSHQLNALEKVFERTHY 51
M + +CDG+ D D E+ K K RRNRTTF ++QL+ LE+ FE++HY
Sbjct: 102 MFSNKCDGDLGDLRKAIESDSKSPDSADGEQPKKKHRRNRTTFTTYQLHELERAFEKSHY 161
Query: 52 PDAFVREELAKKVCLSEARVQVWFQNRRAKFRRNERNFISHRNL--------DAPTSEQP 103
PD + REELA KV L E RVQVWFQNRRAK+RR E+ S L + P+
Sbjct: 162 PDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKIDASTMKLHDSPMLSFNRPSMHPT 221
Query: 104 LPPCTNATPLSSAPPS 119
+ P N+ PL PS
Sbjct: 222 VGPMNNSLPLDPWLPS 237
>sp|Q62798|DRGX_RAT Dorsal root ganglia homeobox protein OS=Rattus norvegicus GN=Drgx
PE=2 SV=1
Length = 263
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
D D + RRK RRNRTTF QL ALE VF +THYPD F REELA K+ L+EARVQVW
Sbjct: 23 DFDDGFLRRKQ--RRNRTTFALQQLEALEAVFAQTHYPDVFTREELAMKINLTEARVQVW 80
Query: 75 FQNRRAKFRRNERNFISHR-NLDAPTSEQPLPPCTNATPLSSAPPS 119
FQNRRAK+R+ ER P +E PP N ++S PP
Sbjct: 81 FQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRN---INSPPPG 123
>sp|Q06453|AL_DROME Homeobox protein aristaless OS=Drosophila melanogaster GN=al PE=1
SV=2
Length = 408
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 3/77 (3%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
D E D+Y +R++ RR RTTF S QL LEK F RTHYPD F REELA K+ L+EAR
Sbjct: 72 SDCEADEYAPKRKQ---RRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEAR 128
Query: 71 VQVWFQNRRAKFRRNER 87
+QVWFQNRRAK+R+ E+
Sbjct: 129 IQVWFQNRRAKWRKQEK 145
>sp|Q9I9A2|RX2_ORYLA Retinal homeobox protein Rx2 OS=Oryzias latipes GN=rx2 PE=2 SV=1
Length = 327
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 16/114 (14%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 131 EHGKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELATKVNLPEVRVQVWFQNRRA 190
Query: 81 KFRRNERNFISHRNL-DAPT---SEQPLPPCTN------------ATPLSSAPP 118
K+RR E+ S L D+P + P+PP +P+SSA P
Sbjct: 191 KWRRQEKMDTSTMKLHDSPMLSFNRPPMPPSVGQVANPMPLDPWLTSPISSATP 244
>sp|Q9PVY0|RX1_CHICK Retinal homeobox protein Rx1 OS=Gallus gallus GN=RX1 PE=2 SV=1
Length = 228
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/100 (55%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 30 EQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRA 89
Query: 81 KFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
K+RR E+ S L D P PP T N P+S++ P
Sbjct: 90 KWRRQEKMEASSMKLHDTPMLSFNRPPMTANVGPMSNSLP 129
>sp|Q9Y2V3|RX_HUMAN Retinal homeobox protein Rx OS=Homo sapiens GN=RAX PE=1 SV=2
Length = 346
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 11 CDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEAR 70
GE + E+ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E R
Sbjct: 120 ATGEAKLSEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVR 179
Query: 71 VQVWFQNRRAKFRRNERNFISHRNL-DAP 98
VQVWFQNRRAK+RR E+ +S L D+P
Sbjct: 180 VQVWFQNRRAKWRRQEKLEVSSMKLQDSP 208
>sp|O42357|RX2_DANRE Retinal homeobox protein Rx2 OS=Danio rerio GN=rx2 PE=2 SV=1
Length = 327
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/102 (51%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 127 DEDQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 186
Query: 79 RAKFRRNERNFISHRNL-DAPTSEQPLPPCT-NATPLSSAPP 118
RAK+RR E+ L D+P PP N P+S++ P
Sbjct: 187 RAKWRRQEKMDTGTMKLHDSPIRSFNRPPMAPNVGPMSNSLP 228
>sp|O35602|RX_MOUSE Retinal homeobox protein Rx OS=Mus musculus GN=Rax PE=2 SV=2
Length = 342
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G+ + E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQ
Sbjct: 122 GDSKLSEEEPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQ 181
Query: 73 VWFQNRRAKFRRNERNFISHRNLDAPTSEQPL------PPCTNATPLSS 115
VWFQNRRAK+RR E+ +S L + PL PP + PL +
Sbjct: 182 VWFQNRRAKWRRQEKLEVSSMKLQ----DSPLLSFSRSPPSSALAPLGT 226
>sp|O42567|RXB_XENLA Retinal homeobox protein Rx-B OS=Xenopus laevis GN=rax-b PE=2 SV=2
Length = 325
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 73/121 (60%), Gaps = 22/121 (18%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAPT-----SEQP----------------LPPCTNATPLSSA 116
RAK+RR E+ ++ L D+P S QP PP +N+T L S
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSPMLSFNRSPQPSAMSALSSSLPLDSWLTPPLSNSTALQSL 241
Query: 117 P 117
P
Sbjct: 242 P 242
>sp|O95076|ALX3_HUMAN Homeobox protein aristaless-like 3 OS=Homo sapiens GN=ALX3 PE=1
SV=2
Length = 343
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKNKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>sp|O70137|ALX3_MOUSE Homeobox protein aristaless-like 3 OS=Mus musculus GN=Alx3 PE=2
SV=1
Length = 343
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 57/75 (76%)
Query: 13 GEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQ 72
G D + + K K RRNRTTF++ QL LEKVF++THYPD + RE+LA + L+EARVQ
Sbjct: 139 GLPDSMELAKTKSKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTDLTEARVQ 198
Query: 73 VWFQNRRAKFRRNER 87
VWFQNRRAK+R+ ER
Sbjct: 199 VWFQNRRAKWRKRER 213
>sp|Q9W2Q1|RX_DROME Retinal homeobox protein Rx OS=Drosophila melanogaster GN=Rx PE=2
SV=2
Length = 873
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 56/74 (75%)
Query: 14 EDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQV 73
+D+ D K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQV
Sbjct: 515 DDEGQDDNCAKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQV 574
Query: 74 WFQNRRAKFRRNER 87
WFQNRRAK+RR E+
Sbjct: 575 WFQNRRAKWRRQEK 588
>sp|Q9JLT7|RX_RAT Retinal homeobox protein Rx OS=Rattus norvegicus GN=Rax PE=2 SV=1
Length = 342
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 21 ERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRA 80
E K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNRRA
Sbjct: 131 EPPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAGKVNLPEVRVQVWFQNRRA 190
Query: 81 KFRRNERNFISHRNL-DAP 98
K+RR E+ +S L D+P
Sbjct: 191 KWRRQEKLEVSSMKLQDSP 209
>sp|O42201|RXA_XENLA Retinal homeobox protein Rx-A OS=Xenopus laevis GN=rax-a PE=2 SV=2
Length = 322
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D ++ K K RRNRTTF ++QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 122 DEQQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNR 181
Query: 79 RAKFRRNERNFISHRNL-DAP 98
RAK+RR E+ ++ L D+P
Sbjct: 182 RAKWRRQEKLEVTSMKLQDSP 202
>sp|P26630|PAX6_DANRE Paired box protein Pax-6 OS=Danio rerio GN=pax6a PE=2 SV=1
Length = 437
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>sp|O35690|PHX2B_MOUSE Paired mesoderm homeobox protein 2B OS=Mus musculus GN=Phox2b PE=1
SV=1
Length = 314
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>sp|Q99453|PHX2B_HUMAN Paired mesoderm homeobox protein 2B OS=Homo sapiens GN=PHOX2B PE=1
SV=2
Length = 314
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 52/71 (73%)
Query: 17 DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQ 76
D+ K K RR RTTF S QL LE+VF THYPD + REELA K+ L+EARVQVWFQ
Sbjct: 88 DHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELALKIDLTEARVQVWFQ 147
Query: 77 NRRAKFRRNER 87
NRRAKFR+ ER
Sbjct: 148 NRRAKFRKQER 158
>sp|P55864|PAX6_XENLA Paired box protein Pax-6 OS=Xenopus laevis GN=pax6 PE=2 SV=1
Length = 422
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSASVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>sp|P63016|PAX6_RAT Paired box protein Pax-6 OS=Rattus norvegicus GN=Pax6 PE=2 SV=1
Length = 422
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>sp|P63015|PAX6_MOUSE Paired box protein Pax-6 OS=Mus musculus GN=Pax6 PE=1 SV=1
Length = 422
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>sp|P26367|PAX6_HUMAN Paired box protein Pax-6 OS=Homo sapiens GN=PAX6 PE=1 SV=2
Length = 422
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>sp|Q1LZF1|PAX6_BOVIN Paired box protein Pax-6 OS=Bos taurus GN=PAX6 PE=2 SV=1
Length = 422
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 73/122 (59%), Gaps = 16/122 (13%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER---------NFISHRNLDAPTSE---QPLPPCTNATPL 113
L EAR+QVWF NRRAK+RR E+ N SH + + S QP+P T TP+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIPISSSFSTSVYQPIPQPT--TPV 306
Query: 114 SS 115
SS
Sbjct: 307 SS 308
>sp|O42115|ARX_DANRE Aristaless-related homeobox protein OS=Danio rerio GN=arx PE=2 SV=1
Length = 453
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 68/111 (61%), Gaps = 13/111 (11%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 193 DGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 252
Query: 65 CLSEARVQVWFQNRRAKFRRNERNFISHRNLDAPTSEQPLP-PCTNATPLS 114
L+EARVQVWFQNRRAK+R+ E+ + A + P P P A PLS
Sbjct: 253 DLTEARVQVWFQNRRAKWRKREKA-----GVQAHPTGLPFPGPLAAAHPLS 298
>sp|P47238|PAX6_COTJA Paired box protein Pax-6 OS=Coturnix coturnix japonica GN=PAX6 PE=2
SV=1
Length = 416
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED D R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 189 SISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 248
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 249 LPEARIQVWFSNRRAKWRREEK 270
>sp|Q91574|ALX1_XENLA ALX homeobox protein 1 OS=Xenopus laevis GN=alx1 PE=2 SV=1
Length = 335
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 9 LRCDGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSE 68
+ D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+E
Sbjct: 123 VELDELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTE 182
Query: 69 ARVQVWFQNRRAKFRRNER 87
ARVQVWFQNRRAK+R+ ER
Sbjct: 183 ARVQVWFQNRRAKWRKRER 201
>sp|O42358|RX3_DANRE Retinal homeobox protein Rx3 OS=Danio rerio GN=rx3 PE=2 SV=1
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 56/77 (72%)
Query: 19 DYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNR 78
D E K K RRNRTTF + QL+ LE+ FE++HYPD + REELA KV L E RVQVWFQNR
Sbjct: 98 DDENPKKKHRRNRTTFTTFQLHELERAFEKSHYPDVYSREELALKVNLPEVRVQVWFQNR 157
Query: 79 RAKFRRNERNFISHRNL 95
RAK+RR E+ +S L
Sbjct: 158 RAKWRRQEKLEVSSIKL 174
>sp|A6YP92|ARX_RAT Homeobox protein ARX OS=Rattus norvegicus GN=Arx PE=2 SV=1
Length = 566
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 310 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 369
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 370 DLTEARVQVWFQNRRAKWRKREK 392
>sp|Q96QS3|ARX_HUMAN Homeobox protein ARX OS=Homo sapiens GN=ARX PE=1 SV=1
Length = 562
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 306 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 365
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 366 DLTEARVQVWFQNRRAKWRKREK 388
>sp|O35085|ARX_MOUSE Homeobox protein ARX OS=Mus musculus GN=Arx PE=2 SV=3
Length = 564
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 7/83 (8%)
Query: 12 DGEDD-------DYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKV 64
DGED D + K K RR RTTF S+QL LE+ F++THYPD F REELA ++
Sbjct: 308 DGEDSVCLSAGSDSEEGLLKRKQRRYRTTFTSYQLEELERAFQKTHYPDVFTREELAMRL 367
Query: 65 CLSEARVQVWFQNRRAKFRRNER 87
L+EARVQVWFQNRRAK+R+ E+
Sbjct: 368 DLTEARVQVWFQNRRAKWRKREK 390
>sp|O73917|PAX6_ORYLA Paired box protein Pax-6 OS=Oryzias latipes GN=pax6 PE=2 SV=1
Length = 437
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Query: 8 TLRCDGEDDDYDYERR--KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVC 65
++ +GED + R K K +RNRT+F Q+ ALEK FERTHYPD F RE LA K+
Sbjct: 208 SISSNGEDSEETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKID 267
Query: 66 LSEARVQVWFQNRRAKFRRNER 87
L EAR+QVWF NRRAK+RR E+
Sbjct: 268 LPEARIQVWFSNRRAKWRREEK 289
>sp|Q15699|ALX1_HUMAN ALX homeobox protein 1 OS=Homo sapiens GN=ALX1 PE=1 SV=2
Length = 326
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>sp|Q63087|ALX1_RAT ALX homeobox protein 1 OS=Rattus norvegicus GN=Alx1 PE=2 SV=1
Length = 326
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>sp|Q8C8B0|ALX1_MOUSE ALX homeobox protein 1 OS=Mus musculus GN=Alx1 PE=1 SV=1
Length = 326
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 55/76 (72%)
Query: 12 DGEDDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARV 71
D D D K RR+RTTF S QL LEKVF++THYPD +VRE+LA + L+EARV
Sbjct: 117 DELGDKCDSNVSSSKKRRHRTTFTSLQLEELEKVFQKTHYPDVYVREQLALRTELTEARV 176
Query: 72 QVWFQNRRAKFRRNER 87
QVWFQNRRAK+R+ ER
Sbjct: 177 QVWFQNRRAKWRKRER 192
>sp|Q94398|HM08_CAEEL Homeobox protein ceh-8 OS=Caenorhabditis elegans GN=ceh-8 PE=4 SV=3
Length = 276
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 49/62 (79%)
Query: 26 KPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFRRN 85
K RRNRTTF + QL+ALE F++THYPD + RE LA KV L E RVQVWFQNRRAKFRR
Sbjct: 59 KQRRNRTTFTTFQLHALEAAFDKTHYPDVYARETLAAKVQLPEVRVQVWFQNRRAKFRRQ 118
Query: 86 ER 87
E+
Sbjct: 119 EK 120
>sp|A1YG25|RAX2_PANPA Retina and anterior neural fold homeobox protein 2 OS=Pan
paniscus GN=RAX2 PE=3 SV=1
Length = 184
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 51/64 (79%)
Query: 24 KPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVWFQNRRAKFR 83
K K RRNRTTF ++QL+ LE+ FE +HYPD + REELA KV L E RVQVWFQNRRAK+R
Sbjct: 24 KKKHRRNRTTFTTYQLHQLERAFEASHYPDVYSREELAAKVHLPEVRVQVWFQNRRAKWR 83
Query: 84 RNER 87
R ER
Sbjct: 84 RQER 87
>sp|O18381|PAX6_DROME Paired box protein Pax-6 OS=Drosophila melanogaster GN=ey PE=2 SV=3
Length = 857
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 54/73 (73%)
Query: 15 DDDYDYERRKPKPRRNRTTFNSHQLNALEKVFERTHYPDAFVREELAKKVCLSEARVQVW 74
+DD K K +RNRT+F + Q+++LEK FERTHYPD F RE LA K+ L EAR+QVW
Sbjct: 418 EDDQARLILKRKLQRNRTSFTNDQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVW 477
Query: 75 FQNRRAKFRRNER 87
F NRRAK+RR E+
Sbjct: 478 FSNRRAKWRREEK 490
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.131 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,020,366
Number of Sequences: 539616
Number of extensions: 2122023
Number of successful extensions: 8844
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 7367
Number of HSP's gapped (non-prelim): 1522
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)