BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2130
(470 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|344237274|gb|EGV93377.1| Ubiquitin carboxyl-terminal hydrolase 12 [Cricetulus griseus]
Length = 262
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 178/264 (67%), Positives = 209/264 (79%), Gaps = 16/264 (6%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKD--------------EFDNYM 309
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + D+Y
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENGNSSSSRVLLLMCPWKVDHYY 119
Query: 310 QQDAHEFLNFLINHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL 369
+ + + MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRL
Sbjct: 120 CGANDRSTIITVEQMKHR-MKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRL 178
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIED 429
F+ S DA NPDRMY+LVAVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+
Sbjct: 179 FNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEE 238
Query: 430 FFGLTSDHQKSSETGYILFYQSRD 453
F+GLTSD K+SE+GYILFYQSRD
Sbjct: 239 FYGLTSDISKNSESGYILFYQSRD 262
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC 31
G N SALEKEIGP++FP NE YFGLVN G TC
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTC 32
>gi|328698286|ref|XP_001952840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Acyrthosiphon pisum]
Length = 385
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/131 (88%), Positives = 126/131 (96%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+KCM+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDRMYNL
Sbjct: 240 QKCMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRMYNL 299
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDD+VDKIDQS IEDF+GLTSD QKSSETGY
Sbjct: 300 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDMVDKIDQSAIEDFYGLTSDLQKSSETGY 359
Query: 446 ILFYQSRDSTD 456
ILFYQSRD+ +
Sbjct: 360 ILFYQSRDAAE 370
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 117/123 (95%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFRD+VLEYKA+NK+
Sbjct: 2 GGNVSQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFRDKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
NKETLL+CLADLFH+IAT KKKVGSIAPKKFI RLRKEK+EF+NYMQQDAHEFLNFLINH
Sbjct: 62 NKETLLTCLADLFHSIATQKKKVGSIAPKKFINRLRKEKEEFNNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/239 (55%), Positives = 154/239 (64%), Gaps = 36/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPFWEQT-SLQDKISL 56
G N+S LE++IG D+FPPNE YFGLVN G TC + +PF ++ + +
Sbjct: 2 GGNVSQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFRDKVLEYKARNKR 61
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S +EF+NYMQQDAHEFLNFLINH
Sbjct: 62 NKETLLTCLADLFHSIATQKKKVGSIAPKKFINRLRKEKEEFNNYMQQDAHEFLNFLINH 121
Query: 93 INEVILSERPQSN--AKSKLSAPDGGGGDNHSSSGF------EEPTWVHEIFQGILTSET 144
INE+ILSER Q+N KSK P+ G++ +SS ++PTWVHEIFQGILTSET
Sbjct: 122 INEIILSERNQTNCNGKSKSITPNIVDGESTTSSITSSSSHNQDPTWVHEIFQGILTSET 181
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+CLNCE VSSKDEDFFDLQVDI QNTSIT CLR FS+TE LCSDNKFKCDNC SYQEAQ
Sbjct: 182 RCLNCEEVSSKDEDFFDLQVDIDQNTSITHCLRCFSNTEMLCSDNKFKCDNCCSYQEAQ 240
>gi|242006825|ref|XP_002424245.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212507614|gb|EEB11507.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 344
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/130 (86%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 214 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 273
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 274 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 333
Query: 446 ILFYQSRDST 455
ILFYQSRD T
Sbjct: 334 ILFYQSRDVT 343
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/101 (83%), Positives = 95/101 (94%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
+ + FGNTCYSNSVLQALYFCKPFR++VLEYKAKNK++KETLL+CLADLF++IAT KKK
Sbjct: 14 YNFLQFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRSKETLLTCLADLFYSIATQKKK 73
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
VGSIAPKKFI RLRKEK+EFDNYMQQDAHEF NFL+NHINE
Sbjct: 74 VGSIAPKKFIARLRKEKEEFDNYMQQDAHEFFNFLVNHINE 114
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/163 (57%), Positives = 106/163 (65%), Gaps = 23/163 (14%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQ--SNAKSKLSAPDGGGGDNHSSSGFEEP 129
+EFDNYMQQDAHEF NFL+NHINE+IL+ER Q SN + +N SG EP
Sbjct: 91 EEFDNYMQQDAHEFFNFLVNHINEIILAERHQITSNKSNSKGTSINIITNNSGDSGSTEP 150
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TWVHEIF+ L VSSKDEDFFDLQVDI QNTSIT CL+ FS+TETLC DN
Sbjct: 151 TWVHEIFKEFLP----------VSSKDEDFFDLQVDIDQNTSITHCLKCFSNTETLCGDN 200
Query: 190 KFKCDNCASYQEAQG-------PNISALEKEIGPDRFPPNERY 225
KFKCDNC+SYQEAQ P I AL + RF E+Y
Sbjct: 201 KFKCDNCSSYQEAQKRMRVKKLPMILALHLK----RFKYMEQY 239
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 124/130 (95%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 537 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 596
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKI+ STIEDF+GLTSD QKSSETGY
Sbjct: 597 MAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSSETGY 656
Query: 446 ILFYQSRDST 455
ILFYQSRD+T
Sbjct: 657 ILFYQSRDAT 666
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 151/241 (62%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G N+S LE++IG D+FPPNE YFGLVN G TC K K R
Sbjct: 300 GANVSQLERDIGADQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKR 359
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 360 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 418
Query: 92 HINEVILSERPQSNAKSKLSAPDGG---------GGDNHSSSGFEEPTWVHEIFQGILTS 142
HINE+IL+ER Q+ + + G GDN +EPTWVHEIFQGILTS
Sbjct: 419 HINEIILAERNQAKGAGTSGSKNAGTIGGGGGSLNGDNPGQP--QEPTWVHEIFQGILTS 476
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEA
Sbjct: 477 ETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEA 536
Query: 203 Q 203
Q
Sbjct: 537 Q 537
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 104/124 (83%), Positives = 117/124 (94%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G N+S LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKAKNK
Sbjct: 299 KGANVSQLERDIGADQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNK 358
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLIN
Sbjct: 359 RTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLIN 418
Query: 323 HINE 326
HINE
Sbjct: 419 HINE 422
>gi|189236253|ref|XP_974193.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 354
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/129 (86%), Positives = 122/129 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 284
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 285 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDQVDKIDASTIEDFYGLTSDTQKSSETGY 344
Query: 446 ILFYQSRDS 454
ILFYQSR+S
Sbjct: 345 ILFYQSRES 353
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/220 (56%), Positives = 150/220 (68%), Gaps = 20/220 (9%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVNGKT-CKEKEDRIEKSQP---------------- 43
G NIS LE++IG ++FP NE YFGLVN CK DR+ + +
Sbjct: 9 GANISQLERDIGSEQFPSNEHYFGLVNALYFCKPFRDRVLEYKAKNKRTKETLLTCLADL 68
Query: 44 FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQ 103
F + + K+ I L +EFDNYMQQDAHEFLNFLINHI+E+IL+ER Q
Sbjct: 69 FHSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLINHISEIILAERQQ 127
Query: 104 SNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
++ + + + G+N ++ EPTWVHEIFQGILTSET+CLNCE VSSKDEDFFDLQ
Sbjct: 128 NSTTNNIKSK--ATGENGTAHTTPEPTWVHEIFQGILTSETRCLNCENVSSKDEDFFDLQ 185
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VDI+QNTSIT CLR FS+TETLCSDNKFKCDNC+SYQEAQ
Sbjct: 186 VDIEQNTSITHCLRCFSNTETLCSDNKFKCDNCSSYQEAQ 225
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/124 (75%), Positives = 104/124 (83%), Gaps = 12/124 (9%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G NIS LE++IG ++FP NE YFGLVN ALYFCKPFRDRVLEYKAKNK
Sbjct: 8 KGANISQLERDIGSEQFPSNEHYFGLVN------------ALYFCKPFRDRVLEYKAKNK 55
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ KETLL+CLADLFH+IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLIN
Sbjct: 56 RTKETLLTCLADLFHSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLIN 115
Query: 323 HINE 326
HI+E
Sbjct: 116 HISE 119
>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
Length = 366
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/129 (86%), Positives = 122/129 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 237 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 297 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDQVDKIDASTIEDFYGLTSDTQKSSETGY 356
Query: 446 ILFYQSRDS 454
ILFYQSR+S
Sbjct: 357 ILFYQSRES 365
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 152/231 (65%), Gaps = 30/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPFWEQT-SLQDKISL 56
G NIS LE++IG ++FP NE YFGLVN G TC + +PF ++ + K
Sbjct: 9 GANISQLERDIGSEQFPSNEHYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKR 68
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S +EFDNYMQQDAHEFLNFLINH
Sbjct: 69 TKETLLTCLADLFHSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 128
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I+E+IL+ER Q++ + + + G+N ++ EPTWVHEIFQGILTSET+CLNCE V
Sbjct: 129 ISEIILAERQQNSTTNNIKSK--ATGENGTAHTTPEPTWVHEIFQGILTSETRCLNCENV 186
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDFFDLQVDI+QNTSIT CLR FS+TETLCSDNKFKCDNC+SYQEAQ
Sbjct: 187 SSKDEDFFDLQVDIEQNTSITHCLRCFSNTETLCSDNKFKCDNCSSYQEAQ 237
Score = 228 bits (580), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 106/124 (85%), Positives = 116/124 (93%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G NIS LE++IG ++FP NE YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK
Sbjct: 8 KGANISQLERDIGSEQFPSNEHYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 67
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ KETLL+CLADLFH+IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLIN
Sbjct: 68 RTKETLLTCLADLFHSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLIN 127
Query: 323 HINE 326
HI+E
Sbjct: 128 HISE 131
>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 239 bits (611), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 124/130 (95%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 251 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 310
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKI+ STIEDF+GLTSD QKSSETGY
Sbjct: 311 MAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSSETGY 370
Query: 446 ILFYQSRDST 455
ILFYQSRD+T
Sbjct: 371 ILFYQSRDAT 380
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/251 (51%), Positives = 153/251 (60%), Gaps = 49/251 (19%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K K R
Sbjct: 2 GANISQLERDIGADQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQS-------------NAKSKLSAP------DGGGGDNHSSSGFEEPTWV 132
HINE+IL+ER Q+ N + P +G G + + +EPTWV
Sbjct: 121 HINEIILAERNQAKGGTAAGGTTTSKNGHVGTATPSLNHLLNGCGTGENGTQQPQEPTWV 180
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
HEIFQGILTSET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFK
Sbjct: 181 HEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFK 240
Query: 193 CDNCASYQEAQ 203
CDNC SYQEAQ
Sbjct: 241 CDNCCSYQEAQ 251
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKAKNK+
Sbjct: 2 GANISQLERDIGADQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
Length = 377
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/130 (84%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP+ILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 247 QKRMRVKKLPLILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 306
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYISIVKSH FWLLFDDD+VDKID S IEDF+GLTSD QKSSETGY
Sbjct: 307 VAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSSETGY 366
Query: 446 ILFYQSRDST 455
ILFYQSRD+T
Sbjct: 367 ILFYQSRDAT 376
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 120/129 (93%)
Query: 198 SYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++Q+ G NIS LE++IG ++FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFRDRVLEY
Sbjct: 10 NFQQRMGANISQLERDIGSEQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFRDRVLEY 69
Query: 258 KAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFL 317
KAKNK+ KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFL
Sbjct: 70 KAKNKRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFL 129
Query: 318 NFLINHINE 326
NFLINHINE
Sbjct: 130 NFLINHINE 138
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/235 (54%), Positives = 149/235 (63%), Gaps = 35/235 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG ++FPPNE YFGLVN G TC K K R
Sbjct: 16 GANISQLERDIGSEQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFRDRVLEYKAKNKR 75
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 76 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 134
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGD---NHSSSGFEEPTWVHEIFQGILTSETKCLN 148
HINE+IL+ER QS K L DG + N S EPTWVHEIFQG LTSET+CLN
Sbjct: 135 HINEIILAERNQSTLK--LQKTDGVKENVTCNGSIPQNTEPTWVHEIFQGTLTSETRCLN 192
Query: 149 CETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CETVSSKDE FFDLQVD+ QNTSIT CL+ FS TETLC+DNKFKCDNC+SYQEAQ
Sbjct: 193 CETVSSKDEHFFDLQVDVDQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQ 247
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 341 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 400
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 401 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 460
Query: 446 ILFYQSRDST 455
ILFYQSRD +
Sbjct: 461 ILFYQSRDCS 470
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 150/233 (64%), Gaps = 38/233 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G IS LE++IG D+FPPNE YFGLVN G TC K + R
Sbjct: 117 GTTISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 176
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 177 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 235
Query: 92 HINEVILSERPQSNAKSKLSAPDGGG-GDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
HINE+IL+ER QS P GG G ++ EPTWVHEIFQGILTSET+CLNCE
Sbjct: 236 HINEIILAERTQSK-------PTGGKCGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCE 288
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
TVSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 289 TVSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 341
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/125 (83%), Positives = 116/125 (92%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
A G IS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+N
Sbjct: 115 AHGTTISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN 174
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K+ KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLI
Sbjct: 175 KRTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLI 234
Query: 322 NHINE 326
NHINE
Sbjct: 235 NHINE 239
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 226 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 285
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 286 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 345
Query: 446 ILFYQSRDST 455
ILFYQSRD +
Sbjct: 346 ILFYQSRDCS 355
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/232 (56%), Positives = 150/232 (64%), Gaps = 36/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G IS LEK+IG D+FPPNE YFGLVN G TC K + R
Sbjct: 2 GTTISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL+ER QS K + G GD S EPTWVHEIFQGILTSET+CLNCET
Sbjct: 121 HINEIILAERTQS----KPTGGKCGAGDAAGSP--PEPTWVHEIFQGILTSETRCLNCET 174
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 175 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 226
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/124 (84%), Positives = 116/124 (93%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG IS LEK+IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK
Sbjct: 1 QGTTISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNK 60
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLIN
Sbjct: 61 RTKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLIN 120
Query: 323 HINE 326
HINE
Sbjct: 121 HINE 124
>gi|307180288|gb|EFN68321.1| Ubiquitin carboxyl-terminal hydrolase 46 [Camponotus floridanus]
Length = 327
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 198 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 257
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 258 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 317
Query: 446 ILFYQSRDST 455
ILFYQSRD +
Sbjct: 318 ILFYQSRDCS 327
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/133 (75%), Positives = 110/133 (82%), Gaps = 8/133 (6%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSN-AKSKLSAPDGGGGDNHSSSGFEEPT 130
+EFDNYMQQDAHEFLNFLINHINE+IL+ER Q+ A K A D G EPT
Sbjct: 73 EEFDNYMQQDAHEFLNFLINHINEIILAERTQNKPAGGKCGAGDAAGSP-------PEPT 125
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQGILTSET+CLNCETVSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNK
Sbjct: 126 WVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNK 185
Query: 191 FKCDNCASYQEAQ 203
FKCD+C+SYQEAQ
Sbjct: 186 FKCDHCSSYQEAQ 198
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 84/96 (87%), Positives = 93/96 (96%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+ KETLL+CLADLF++IAT KKKVGSIA
Sbjct: 1 FGNTCYSNSVLQALYFCRPFREKVLEYKARNKRTKETLLTCLADLFYSIATQKKKVGSIA 60
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
PKKFI RLRKEK+EFDNYMQQDAHEFLNFLINHINE
Sbjct: 61 PKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINE 96
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/130 (85%), Positives = 123/130 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 224 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 283
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 284 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 343
Query: 446 ILFYQSRDST 455
ILFYQSRD +
Sbjct: 344 ILFYQSRDCS 353
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 148/232 (63%), Gaps = 38/232 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K + R
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL ER QS P GG + EPTWVHEIFQGILTSET+CLNCET
Sbjct: 121 HINEIIL-ERTQSK-------PAGGKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCET 172
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 173 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 224
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/123 (84%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
Length = 367
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/128 (85%), Positives = 122/128 (95%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 238 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKI+ STIEDF+GLTSD QKSSETGY
Sbjct: 298 MAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSSETGY 357
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 358 ILFYQSRD 365
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 153/238 (64%), Gaps = 36/238 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K K R
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNRR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE------EPTWVHEIFQGILTSETK 145
HINE+IL+ER Q+ A + PD GG N + G EPTWVHEIFQGILTSET+
Sbjct: 121 HINEIILAERNQAKAGGAANGPDLNGGLNGGNGGSSSNSGNTEPTWVHEIFQGILTSETR 180
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 181 CLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 238
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/124 (85%), Positives = 117/124 (94%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKAKN+
Sbjct: 1 QGANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNR 60
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ KETLLSCLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLIN
Sbjct: 61 RTKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLIN 120
Query: 323 HINE 326
HINE
Sbjct: 121 HINE 124
>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
Length = 379
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/128 (85%), Positives = 122/128 (95%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 250 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 309
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKI+ STIEDF+GLTSD QKSSETGY
Sbjct: 310 MAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSSETGY 369
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 370 ILFYQSRD 377
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKAKN++
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNRR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 224 bits (571), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 132/253 (52%), Positives = 152/253 (60%), Gaps = 54/253 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K K R
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNRR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLSCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQ--------------------SNAKSKLSAP-DGGGGDNHSSSGFEEPT 130
HINE+IL+ER Q N P DG GG +++ EPT
Sbjct: 121 HINEIILAERNQAKAAGGKGSSSSSSGNGTAGQNGSLGPGTPQDGSGGVAGNNT---EPT 177
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQGILTSET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNK
Sbjct: 178 WVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNK 237
Query: 191 FKCDNCASYQEAQ 203
FKCDNC SYQEAQ
Sbjct: 238 FKCDNCCSYQEAQ 250
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 153/233 (65%), Gaps = 31/233 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKCLNCE 150
HINE+IL+ER ++ K +A G N ++G EPTWVHEIFQGILTSET+CLNCE
Sbjct: 121 HINEIILAERNTGSSTGKTAAGGAIPGPNAQTNGANTEPTWVHEIFQGILTSETRCLNCE 180
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
TVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 181 TVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 233
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 233 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 292
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 293 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 352
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 353 ILFYQSRD 360
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|195054050|ref|XP_001993939.1| GH22304 [Drosophila grimshawi]
gi|193895809|gb|EDV94675.1| GH22304 [Drosophila grimshawi]
Length = 432
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 302 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 361
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 362 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 421
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 422 ILFYQSRD 429
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG + FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSEMFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 72/76 (94%)
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
EPTWVHEIFQGILTSET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCS
Sbjct: 227 EPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCS 286
Query: 188 DNKFKCDNCASYQEAQ 203
DNKFKCDNC SYQEAQ
Sbjct: 287 DNKFKCDNCCSYQEAQ 302
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 74/140 (52%), Gaps = 30/140 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG + FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSEMFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLS 111
HINE+IL+ER + K +
Sbjct: 121 HINEIILAERNNTGNTGKTT 140
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 109/130 (83%), Positives = 120/130 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 235 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 294
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 295 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 354
Query: 446 ILFYQSRDST 455
ILFYQSRD T
Sbjct: 355 ILFYQSRDCT 364
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 152/235 (64%), Gaps = 33/235 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQ--SNAKSKLSAPDGGGGDNHSSSGF-EEPTWVHEIFQGILTSETKCLN 148
HINE+IL+ER SN K S G + S+G EPTWVHEIFQGILTSET+CLN
Sbjct: 121 HINEIILAERNAGPSNGNPKASNQGGSTRNGTGSNGANSEPTWVHEIFQGILTSETRCLN 180
Query: 149 CETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 181 CETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 235
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|198450754|ref|XP_001358111.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
gi|198131177|gb|EAL27248.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 303 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 362
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 363 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 422
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 423 ILFYQSRD 430
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 115/123 (93%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FP NE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPANEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/100 (72%), Positives = 79/100 (79%), Gaps = 7/100 (7%)
Query: 111 SAPDGGGGDNHSSSGF-------EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
S D GG +++ EPTWVHEIFQGILTSET+CLNCETVSSKDE+FFDLQ
Sbjct: 204 SVLDASGGLTATTTPLVQTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQ 263
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 264 VDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 303
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 70/130 (53%), Gaps = 30/130 (23%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FP NE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPANEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSER 101
HINE+IL+ER
Sbjct: 121 HINEIILAER 130
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/128 (85%), Positives = 121/128 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 240 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 299
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 300 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 359
Query: 446 ILFYQSRD 453
ILFYQS D
Sbjct: 360 ILFYQSID 367
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 149/232 (64%), Gaps = 37/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LEK+IG D+FPPNE YFGLVN G TC K + R
Sbjct: 17 GTNISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 76
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 77 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 135
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL+ER QS P GG + EPTWVHEIFQGILTSET+CLNCET
Sbjct: 136 HINEIILAERSQSK-------PTGGKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCET 188
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 189 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 240
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LEK+IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 17 GTNISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 77 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 136
Query: 324 INE 326
INE
Sbjct: 137 INE 139
>gi|24649152|ref|NP_651099.1| CG7023 [Drosophila melanogaster]
gi|195331161|ref|XP_002032271.1| GM26467 [Drosophila sechellia]
gi|7300926|gb|AAF56066.1| CG7023 [Drosophila melanogaster]
gi|33636511|gb|AAQ23553.1| RE52890p [Drosophila melanogaster]
gi|194121214|gb|EDW43257.1| GM26467 [Drosophila sechellia]
gi|220951116|gb|ACL88101.1| CG7023-PB [synthetic construct]
Length = 424
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 295 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 354
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 355 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 414
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 415 ILFYQSRD 422
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 80/100 (80%)
Query: 104 SNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
S + + + P G ++ EPTWVHEIFQGILTSET+CLNCETVSSKDE+FFDLQ
Sbjct: 196 SGSLTATTTPIISGNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQ 255
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 256 VDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 295
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 76/146 (52%), Gaps = 30/146 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGG 117
HINE+IL+ER + A + GG
Sbjct: 121 HINEIILAERNAGPSNGNPKATNQGG 146
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/130 (84%), Positives = 122/130 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 284
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 285 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 344
Query: 446 ILFYQSRDST 455
ILFYQS D +
Sbjct: 345 ILFYQSIDCS 354
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 149/232 (64%), Gaps = 37/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K + R
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL+ER QS P GG + EPTWVHEIFQGILTSET+CLNCET
Sbjct: 121 HINEIILAERNQSK-------PAGGKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCET 173
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 174 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 225
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/123 (84%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/128 (85%), Positives = 121/128 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 284
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 285 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 344
Query: 446 ILFYQSRD 453
ILFYQS D
Sbjct: 345 ILFYQSID 352
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/232 (56%), Positives = 149/232 (64%), Gaps = 37/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LEK+IG D+FPPNE YFGLVN G TC K + R
Sbjct: 2 GTNISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL+ER QS P GG + EPTWVHEIFQGILTSET+CLNCET
Sbjct: 121 HINEIILAERSQSK-------PTGGKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCET 173
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 174 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 225
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LEK+IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 2 GTNISQLEKDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|195143509|ref|XP_002012740.1| GL23766 [Drosophila persimilis]
gi|194101683|gb|EDW23726.1| GL23766 [Drosophila persimilis]
Length = 421
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 292 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 351
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 352 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 411
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 412 ILFYQSRD 419
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 115/123 (93%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FP NE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPANEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 132/292 (45%), Positives = 152/292 (52%), Gaps = 90/292 (30%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FP NE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPANEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSER--------PQSNAKSK---------------------------------- 109
HINE+IL+ER N KS
Sbjct: 121 HINEIILAERNAGPSHGNGNGNGKSSARPANRAHVNSNSNSNSTSNSTTTNGNSSNSTGS 180
Query: 110 -----------LSAPDGGGGDNHSSSGF-------EEPTWVHEIFQGILTSETKCLNCET 151
S D GG +++ EPTWVHEIFQGILTSET+CLNCET
Sbjct: 181 LNAAAGAAAATTSVLDASGGLTATTTPLVQTNGANSEPTWVHEIFQGILTSETRCLNCET 240
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 241 VSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 292
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/128 (85%), Positives = 121/128 (94%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 284
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QKSSETGY
Sbjct: 285 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGY 344
Query: 446 ILFYQSRD 453
ILFYQS D
Sbjct: 345 ILFYQSID 352
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/232 (55%), Positives = 149/232 (64%), Gaps = 37/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC----------------------KEKEDR 37
G NIS LE++IG D+FPPNE YFGLVN G TC K + R
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 38 IEKS------QPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+++ F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
HINE+IL+ER QS P GG + EPTWVHEIFQGILTSET+CLNCET
Sbjct: 121 HINEIILAERSQSK-------PAGGKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCET 173
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDFFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 174 VSSKDEDFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQ 225
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/123 (84%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF++IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFYSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|194743990|ref|XP_001954481.1| GF16711 [Drosophila ananassae]
gi|190627518|gb|EDV43042.1| GF16711 [Drosophila ananassae]
Length = 416
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 287 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 346
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 347 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 406
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 407 ILFYQSRD 414
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/82 (84%), Positives = 74/82 (90%)
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
S+ EPTWVHEIFQGILTSET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+
Sbjct: 206 SNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSN 265
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
TETLCSDNKFKCDNC SYQEAQ
Sbjct: 266 TETLCSDNKFKCDNCCSYQEAQ 287
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 74/145 (51%), Gaps = 30/145 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGG 116
HINE+IL+ER + GG
Sbjct: 121 HINEIILAERNAGSGNGSGKGASGG 145
>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
Length = 361
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 231 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 290
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 291 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 350
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 351 ILFYQSRD 358
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/123 (86%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG + FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSELFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 128/236 (54%), Positives = 150/236 (63%), Gaps = 39/236 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG + FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSELFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSER----PQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCL 147
HINE+IL+ER + S + P G ++ EPTWVHEIFQGILTSET+CL
Sbjct: 121 HINEIILAERNSGKTPAAGSSATTTPIG-----QTNGANTEPTWVHEIFQGILTSETRCL 175
Query: 148 NCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
NCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 176 NCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 231
>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
Length = 353
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/130 (83%), Positives = 122/130 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M +KKLPMILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 224 QKRMMLKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 283
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH FWLLFDDD+VDKID STIEDF+GLTSD QK+SETGY
Sbjct: 284 VAVVIHCGSGPNRGHYISIVKSHGFWLLFDDDMVDKIDSSTIEDFYGLTSDIQKNSETGY 343
Query: 446 ILFYQSRDST 455
ILFYQSRD +
Sbjct: 344 ILFYQSRDCS 353
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 105/123 (85%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G NIS LE++IG D+FPPNE YFGLVNFGNTCYSNSVLQALYFC+PFR++VLEYKA+NK+
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLFH+IAT KKKVGSIAPKKFI RLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFHSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 147/231 (63%), Gaps = 36/231 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPFWEQT-SLQDKISL 56
G NIS LE++IG D+FPPNE YFGLVN G TC + +PF E+ + +
Sbjct: 2 GANISQLERDIGSDQFPPNEHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARNKR 61
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S +EFDNYMQQDAHEFLNFLINH
Sbjct: 62 TKETLLTCLADLFHSIATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
INE+IL+ER QS A D G EPTWVHEIFQGILTSET+CLNCETV
Sbjct: 122 INEIILAERNQSKPAGGKGAGDAGTP--------PEPTWVHEIFQGILTSETRCLNCETV 173
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDFFDLQVD+ QNTSIT CL+ FS+TETLCSDNKFKCD+C+SYQEAQ
Sbjct: 174 SSKDEDFFDLQVDVDQNTSITHCLKCFSNTETLCSDNKFKCDHCSSYQEAQ 224
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 235 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 294
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 295 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 354
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 355 ILFYQSRD 362
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 132/238 (55%), Positives = 153/238 (64%), Gaps = 39/238 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQSNAKSKLSAPDGGG------GDNHSSSGFEEPTWVHEIFQGILTSETK 145
HINE+IL+ER + A + GG G N ++S EPTWVHEIFQGILTSET+
Sbjct: 121 HINEIILAERNAGPSNGNPKATNQGGSTRNGTGTNGANS---EPTWVHEIFQGILTSETR 177
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 178 CLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 235
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 235 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 294
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 295 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 354
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 355 ILFYQSRD 362
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/238 (56%), Positives = 155/238 (65%), Gaps = 39/238 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSERPQ--SNAKSKLSAPDG----GGGDNHSSSGFEEPTWVHEIFQGILTSETK 145
HINE+IL+ER SN K S+ G G G N ++S EPTWVHEIFQGILTSET+
Sbjct: 121 HINEIILAERNAGPSNGNPKSSSQGGSTRNGTGTNGANS---EPTWVHEIFQGILTSETR 177
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCSDNKFKCDNC SYQEAQ
Sbjct: 178 CLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQ 235
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGSDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
>gi|195443886|ref|XP_002069621.1| GK11474 [Drosophila willistoni]
gi|194165706|gb|EDW80607.1| GK11474 [Drosophila willistoni]
Length = 438
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 119/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+ SDDAVNPDR+Y+L
Sbjct: 309 QKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDL 368
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKI+ STIEDF+GLTSD KSSETGY
Sbjct: 369 TAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSSETGY 428
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 429 ILFYQSRD 436
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 116/123 (94%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N+S LE+EIG D FPPNE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYKAKNK+
Sbjct: 2 GANVSQLEREIGTDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLLSCLADLF++IAT KKKVGSIAPKKFITRLRKEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
INE
Sbjct: 122 INE 124
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/76 (89%), Positives = 72/76 (94%)
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
EPTWVHEIFQGILTSET+CLNCETVSSKDE+FFDLQVD+ QNTSIT CLR FS+TETLCS
Sbjct: 234 EPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNTSITHCLRCFSNTETLCS 293
Query: 188 DNKFKCDNCASYQEAQ 203
DNKFKCDNC SYQEAQ
Sbjct: 294 DNKFKCDNCCSYQEAQ 309
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 71/130 (54%), Gaps = 30/130 (23%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK--EDRIEKSQ 42
G N+S LE+EIG D FPPNE YFGLVN G TC +EK E + + +
Sbjct: 2 GANVSQLEREIGTDLFPPNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKR 61
Query: 43 P-----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
P F+ + + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 PKETLLSCLADLFYSIATQKKKVGSIAPKKFITRLRK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSER 101
HINE+IL+ER
Sbjct: 121 HINEIILAER 130
>gi|321475285|gb|EFX86248.1| hypothetical protein DAPPUDRAFT_308438 [Daphnia pulex]
Length = 376
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 122/130 (93%), Gaps = 2/130 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+KCM+VKKLP+ILALHLKRFKY+++ NRH+KVSHRVVFPLELRLF+ S++ PDR+Y+L
Sbjct: 249 QKCMRVKKLPLILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSEEC--PDRLYDL 306
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYISIVKSHDFWLLFDDD+VDKID S +EDF+GLTSD QK+SETGY
Sbjct: 307 VAVVVHCGSGPNRGHYISIVKSHDFWLLFDDDIVDKIDPSALEDFYGLTSDVQKASETGY 366
Query: 446 ILFYQSRDST 455
ILFYQSRD++
Sbjct: 367 ILFYQSRDTS 376
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 102/123 (82%), Positives = 113/123 (91%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG ++FP NE YFGLVNFGNTCYSNSVLQALYFCKPFR++VLEYK KNK+
Sbjct: 2 GANASQLEKEIGSEQFPTNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKMKNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+KETLL+CLADLFHNI T KKKVG+IAPKKFI RL+KEK+EFDNYMQQDAHEFLNFLINH
Sbjct: 62 SKETLLTCLADLFHNITTQKKKVGTIAPKKFIARLKKEKEEFDNYMQQDAHEFLNFLINH 121
Query: 324 INE 326
I+E
Sbjct: 122 ISE 124
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/250 (51%), Positives = 151/250 (60%), Gaps = 49/250 (19%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPFWEQ---------- 47
G N S LEKEIG ++FP NE YFGLVN G TC + +PF E+
Sbjct: 2 GANASQLEKEIGSEQFPTNEHYFGLVNFGNTCYSNSVLQALYFCKPFREKVLEYKMKNKR 61
Query: 48 ----------------TSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
T+ + K+ I L +EFDNYMQQDAHEFLNFLIN
Sbjct: 62 SKETLLTCLADLFHNITTQKKKVGTIAPKKFIARLKK-EKEEFDNYMQQDAHEFLNFLIN 120
Query: 92 HINEVILSER--------PQSNAKSKLSAP----------DGGGGDNHSSSGFEEPTWVH 133
HI+E+I +ER P +N K + S DG G + +S+G E TWVH
Sbjct: 121 HISEIITAERHQTNNSATPTTNGKVQNSKDPCNGSASLKFDGSNG-SMTSTGNHESTWVH 179
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EIFQGILTSET+CLNCETVS+K+EDFFDLQVD+ QNTSIT CLR FSSTETLC+DNKFKC
Sbjct: 180 EIFQGILTSETRCLNCETVSNKEEDFFDLQVDVDQNTSITHCLRTFSSTETLCTDNKFKC 239
Query: 194 DNCASYQEAQ 203
D C+SYQEAQ
Sbjct: 240 DVCSSYQEAQ 249
>gi|151556803|gb|AAI48870.1| USP12P1 protein [Bos taurus]
Length = 144
Score = 225 bits (574), Expect = 3e-56, Method: Composition-based stats.
Identities = 100/125 (80%), Positives = 115/125 (92%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LVAV
Sbjct: 20 MKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAV 79
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
V+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K SE+GYILF
Sbjct: 80 VVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKISESGYILF 139
Query: 449 YQSRD 453
YQSRD
Sbjct: 140 YQSRD 144
>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 387
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/128 (80%), Positives = 116/128 (90%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY ++ NRH K+S+RVVFPLELRLF+ SDDA NPDRMY+L
Sbjct: 260 QKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRLFNTSDDAYNPDRMYDL 319
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKID S IEDF+GLTSD K+SE+GY
Sbjct: 320 VAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDIVDKIDASAIEDFYGLTSDTPKTSESGY 379
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 380 ILFYQSRE 387
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/121 (78%), Positives = 106/121 (87%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG D+FP NE YFGLVNFGNTCY NSVLQALYFCKPFR++VLEYKA+NK+
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLFH+IA KKK G+IAPKKFI RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNT 121
Query: 324 I 324
I
Sbjct: 122 I 122
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 144/259 (55%), Gaps = 56/259 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT-SLQDKISL 56
G N S LEKEIG D+FP NE YFGLVN G TC + +PF E+ + +
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S + FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNT 121
Query: 93 INEVILSER------PQSNAK------SKLSAPDGGGGDNHSSSGFE------------- 127
I +++ +E+ Q+NAK S +A + GG S+
Sbjct: 122 IADILQAEKQQQQQNSQTNAKGNKCSSSGDTAHNAAGGPMASAGATAQCMQNQVGGTAQP 181
Query: 128 ---EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTET 184
EPTWVH+IFQG LT+ET+CLNCETVSSKDEDF DL VD+ QNTSIT CLRGFS+TET
Sbjct: 182 PKPEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNTSITHCLRGFSNTET 241
Query: 185 LCSDNKFKCDNCASYQEAQ 203
LCS++K+ C+NC S QEAQ
Sbjct: 242 LCSEHKYYCENCCSKQEAQ 260
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 360 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 419
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 420 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 479
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 480 LFYQSRD 486
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 111/130 (85%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++ +K
Sbjct: 134 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 193
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 194 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 252
Query: 324 INEKCMKVKK 333
I + + +K
Sbjct: 253 IADILQEERK 262
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 143/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 134 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 193
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 194 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 252
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L P+G ++S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 253 IADILQEERKQEKQNGRL--PNGNIDSENNST--PDPTWVHEIFQGTLTNETRCLTCETI 308
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 309 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 359
>gi|432117381|gb|ELK37725.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Myotis davidii]
Length = 422
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 296 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 355
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 356 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 415
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 416 LFYQSRD 422
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 97/179 (54%), Gaps = 32/179 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 120 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCET 175
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 43/51 (84%)
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 244 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 294
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 314 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 373
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 374 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 433
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 434 LFYQSRD 440
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 85 GRGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 144
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 145 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 203
Query: 322 NHI 324
N I
Sbjct: 204 NTI 206
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 141/231 (61%), Gaps = 34/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 87 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 145
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 146 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 204
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L G D+ ++S +PTWVHEIFQG LT+ET+CL CET
Sbjct: 205 TIADILQEERKQEKQNGRLP---NGNIDSENNSSPPDPTWVHEIFQGTLTNETRCLTCET 261
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 262 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 312
>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
mulatta]
Length = 626
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 500 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 559
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 560 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 619
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 620 LFYQSRD 626
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 111/126 (88%), Gaps = 1/126 (0%)
Query: 199 YQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
+++A G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK
Sbjct: 268 FRKALGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYK 327
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++ +K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN
Sbjct: 328 SQPRK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLN 386
Query: 319 FLINHI 324
+L+N I
Sbjct: 387 YLLNTI 392
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 140/230 (60%), Gaps = 32/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 273 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 332
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 333 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 391
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 392 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 448
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 449 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 498
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 242 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 301
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 302 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 361
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 362 LFYQSRD 368
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 200 QEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
++ QG N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK+
Sbjct: 11 RKEQGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKS 70
Query: 260 KNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNF 319
+ +K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+
Sbjct: 71 QPRK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNY 129
Query: 320 LINHI 324
L+N I
Sbjct: 130 LLNTI 134
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 140/230 (60%), Gaps = 32/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 15 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 74
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 75 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 133
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 134 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 190
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 191 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240
>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 287 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 346
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 347 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 406
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 407 LFYQSRD 413
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 58 STGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 117
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 118 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 176
Query: 322 NHI 324
N I
Sbjct: 177 NTI 179
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 60 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 119
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 120 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 178
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 179 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 235
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 236 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 286
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/130 (77%), Positives = 121/130 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ SDDAVN D++Y+L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSDDAVNADKIYDL 279
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IEDF+GLTSD QK+SE+GY
Sbjct: 280 VAVVIHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAHAIEDFYGLTSDIQKTSESGY 339
Query: 446 ILFYQSRDST 455
ILFYQSRDS+
Sbjct: 340 ILFYQSRDSS 349
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG D+FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL+YKA+ KK
Sbjct: 2 GANASQLEKEIGSDQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLQYKAQPKK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CL+DLFH+IAT KKKVG IAPKKFI RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KETLLTCLSDLFHSIATQKKKVGVIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 I 324
+
Sbjct: 121 V 121
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/232 (48%), Positives = 142/232 (61%), Gaps = 42/232 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQPF 44
G N S LEKEIG D+FP NE YFGLVN G TC +EK + K+QP
Sbjct: 2 GANASQLEKEIGSDQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLQY-KAQPK 60
Query: 45 WEQTSL-------------QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
++T L + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KKETLLTCLSDLFHSIATQKKKVGVIAPKKFIARLRK-ENELFDNYMQQDAHEFLNYLLN 119
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
+ +++ +E+ Q A G DN++ S +PTWVH+IFQG LT+ET+CL CET
Sbjct: 120 TVADLLQAEKQQ--------AKGINGTDNNTKS---DPTWVHDIFQGTLTNETRCLCCET 168
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD+ QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 169 VSSKDEDFLDLSVDVDQNTSITHCLRGFSNTETLCSEYKYYCEMCCSKQEAQ 220
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 243 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 302
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 303 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 362
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 363 LFYQSRD 369
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L P+G ++S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRL--PNGNIDSENNST--PDPTWVHEIFQGTLTNETRCLTCETI 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 242
>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
Length = 370
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 139/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWV EIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVDEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 254 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 313
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 314 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 373
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 374 LFYQSRD 380
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 25 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 84
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 85 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 143
Query: 322 NHI 324
N I
Sbjct: 144 NTI 146
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 27 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 86
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 87 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 145
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 146 IADILQEERKQEKQNGRIPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 202
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 203 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 253
>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
jacchus]
gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
troglodytes]
gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
Length = 370
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLRNGDVDSEDNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 288 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 347
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 348 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 407
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 408 LFYQSRD 414
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
A G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 59 AAGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 118
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 119 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 177
Query: 322 NHI 324
N I
Sbjct: 178 NTI 180
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 61 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 120
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 121 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 179
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 180 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 236
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 237 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 287
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 227 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 286
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 287 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 346
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 347 LFYQSRD 353
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L P+G ++S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 120 IADILQEERKQEKQNGRL--PNGNIDSENNST--PDPTWVHEIFQGTLTNETRCLTCETI 175
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 176 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 226
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 248 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 307
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 308 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 367
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 368 LFYQSRD 374
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 19 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 78
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 79 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 137
Query: 322 NHI 324
N I
Sbjct: 138 NTI 140
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 139/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 21 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 80
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 81 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 139
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L +NHS+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 140 IADILQEERKQEKQNGRLPNGSVDSENNHSTP---DPTWVHEIFQGTLTNETRCLTCETI 196
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 197 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 247
>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
Full=Deubiquitinating enzyme 12-A; AltName:
Full=Ubiquitin thioesterase 12-A; AltName:
Full=Ubiquitin-specific-processing protease 12-A
gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
Length = 370
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CL+DLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRIPNGNIDNENNNSAP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
Full=Deubiquitinating enzyme 12-B; AltName:
Full=Ubiquitin thioesterase 12-B; AltName:
Full=Ubiquitin-specific-processing protease 12-B
Length = 370
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CL+DLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRIPNGNIDNENNNNTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 359
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 233 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 292
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 293 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 352
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 353 LFYQSRD 359
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
E +G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++
Sbjct: 4 EGEGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQ 63
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L
Sbjct: 64 PRK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYL 122
Query: 321 INHI 324
+N I
Sbjct: 123 LNTI 126
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 7 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 66
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 67 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 125
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G DN ++S +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 126 IADILQEERKQEKQNGRLP---NGNIDNENNSP-PDPTWVHEIFQGTLTNETRCLTCETI 181
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 182 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 232
>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
leucogenys]
gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
Length = 355
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 229 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 288
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 289 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 348
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 349 LFYQSRD 355
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 I 324
I
Sbjct: 121 I 121
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 61
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 62 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 120
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 121 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 177
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 178 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 228
>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 370
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPDNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N +
Sbjct: 134 NTV 136
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPDNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 VADILQEERKQEKQNGRLP---NGCIDSENNNSLPDPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
Length = 376
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 250 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 309
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 310 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 369
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 370 LFYQSRD 376
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 21 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 80
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CL+DLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 81 RK-KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 139
Query: 322 NHI 324
N I
Sbjct: 140 NTI 142
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 23 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 82
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 83 KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 141
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 142 IADILQEERKQEKQNGRIPNGNIDNENNNNTP---DPTWVHEIFQGTLTNETRCLTCETI 198
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 199 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 249
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 228 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 287
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 288 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 347
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 348 LFYQSRD 354
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 60
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 120 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 176
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 177 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 227
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 238 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 297
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 298 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 357
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 358 LFYQSRD 364
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++ +K
Sbjct: 11 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 70
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 71 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 129
Query: 324 I 324
I
Sbjct: 130 I 130
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 11 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 70
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 71 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 129
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 130 IADILQEERKQEKQNGRLRNGDVDSEDNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 186
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 187 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 237
>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12 [Pongo abelii]
Length = 362
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 236 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 295
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 296 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 355
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 356 LFYQSRD 362
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 8 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 67
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 68 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 126
Query: 324 I 324
I
Sbjct: 127 I 127
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/232 (46%), Positives = 138/232 (59%), Gaps = 33/232 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 8 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 67
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 68 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 126
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 127 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 183
Query: 153 SS-KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SS K + F DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 184 SSTKMKIFIDLSVDVQQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 235
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 250 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 309
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 310 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 369
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 370 LFYQSRD 376
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/122 (76%), Positives = 107/122 (87%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +
Sbjct: 22 EGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 81
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 82 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLN 140
Query: 323 HI 324
I
Sbjct: 141 TI 142
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 23 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 82
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 83 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 141
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 142 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 198
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 199 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 249
>gi|281345515|gb|EFB21099.1| hypothetical protein PANDA_013569 [Ailuropoda melanoleuca]
Length = 327
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 201 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 260
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 261 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 320
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 321 LFYQSRD 327
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 98/130 (75%), Gaps = 3/130 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FDNYMQQDAHEFLN+L+N I +++ ER Q +L G D+ +++ +PTWVH
Sbjct: 74 FDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVH 130
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EIFQG LT+ET+CL CET+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C
Sbjct: 131 EIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC 190
Query: 194 DNCASYQEAQ 203
+ C S QEA
Sbjct: 191 EECRSKQEAH 200
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/94 (76%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCY NSVLQALYFC+PFR++VL YK++ +K KE LL+CLADLFH+IAT KKKVG I
Sbjct: 1 FGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK-KENLLTCLADLFHSIATQKKKVGVIP 59
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
PKKFITRLRKE + FDNYMQQDAHEFLN+L+N I
Sbjct: 60 PKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI 93
>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
porcellus]
Length = 369
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 243 KRMKVKKLPMILALHLKRFKYMDQLHRYAKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 302
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 303 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 362
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 363 LFYQSRD 369
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 16 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 75
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 76 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 134
Query: 324 I 324
I
Sbjct: 135 I 135
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 16 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 75
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 76 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 134
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 135 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 242
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 473 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 532
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 533 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 592
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 593 LFYQSRD 599
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 108/124 (87%), Gaps = 1/124 (0%)
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
E QG N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 243 ENQGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQ 302
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L
Sbjct: 303 PRK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYL 361
Query: 321 INHI 324
+N I
Sbjct: 362 LNTI 365
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 246 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 305
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 306 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 364
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 365 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 421
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 422 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 472
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 324 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 383
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 384 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 443
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 444 LFYQSRD 450
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/115 (77%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Query: 210 LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
LEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K KE LL
Sbjct: 103 LEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK-KENLL 161
Query: 270 SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N I
Sbjct: 162 TCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTI 216
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 136/224 (60%), Gaps = 32/224 (14%)
Query: 7 LEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-------- 43
LEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 103 LEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLT 162
Query: 44 -----FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVIL 98
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N I +++
Sbjct: 163 CLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNTIADILQ 221
Query: 99 SERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDED 158
ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET+SSKDED
Sbjct: 222 EERKQEKQNGRLRNGDVDTEDNNSTP---DPTWVHEIFQGTLTNETRCLTCETISSKDED 278
Query: 159 FFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
F DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 279 FLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 322
>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
Length = 354
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 228 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 287
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 288 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 347
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 348 LFYQSRD 354
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++ +K
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 I 324
I
Sbjct: 121 I 121
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 61
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 62 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 120
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G DN ++S +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 121 IADILQEERKQEKQNGRLP---NGNIDNENNSP-PDPTWVHEIFQGTLTNETRCLTCETI 176
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 177 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 227
>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
Length = 353
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 227 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 286
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 287 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 346
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 347 LFYQSRD 353
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++ +K
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 141/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 1 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 60
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G DN + S +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 120 IADILQEERKQEKQNGRLP---NGNIDNENKSP-PDPTWVHEIFQGTLTNETRCLTCETI 175
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 176 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 226
>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
Length = 361
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 235 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 294
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 295 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 354
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 355 LFYQSRD 361
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 8 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 67
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 68 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 126
Query: 324 I 324
I
Sbjct: 127 I 127
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 8 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 67
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 68 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 126
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 127 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 183
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 184 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 234
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 232 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 291
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 292 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 351
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 352 LFYQSRD 358
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 107/122 (87%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK++ +
Sbjct: 5 EGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPR 64
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 65 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLN 123
Query: 323 HI 324
I
Sbjct: 124 TI 125
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 142/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 6 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKSQPRK 65
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 66 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 124
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ SSS +PTWVHEIFQG LT+ET+CL CETV
Sbjct: 125 IADILQEERKQEKQNGRLP---NGSVDSESSSP-PDPTWVHEIFQGTLTNETRCLTCETV 180
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 181 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 231
>gi|444521451|gb|ELV13184.1| Ubiquitin carboxyl-terminal hydrolase 12 [Tupaia chinensis]
Length = 327
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 116/125 (92%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LVAV
Sbjct: 203 MKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAV 262
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
V+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYILF
Sbjct: 263 VVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILF 322
Query: 449 YQSRD 453
YQSRD
Sbjct: 323 YQSRD 327
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 INEKCMKVKK 333
I + + +K
Sbjct: 121 IADILQEERK 130
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 121/206 (58%), Gaps = 34/206 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 60
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 119
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 120 TIADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCET 176
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLR 177
+SSKDEDF DL VD++QNTSIT CLR
Sbjct: 177 ISSKDEDFLDLSVDVEQNTSITHCLR 202
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 349 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 408
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 409 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 468
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 469 LFYQSRD 475
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 108/122 (88%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +
Sbjct: 121 QGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 180
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 181 K-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLN 239
Query: 323 HI 324
I
Sbjct: 240 TI 241
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 122 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 181
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 182 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 240
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 241 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 297
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 298 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 348
>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
Length = 479
Score = 221 bits (562), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 353 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 412
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 413 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 472
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 473 LFYQSRD 479
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 139/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 126 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 185
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 186 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 244
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D S G +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 245 IADILQEERKQEKQNGRLP---NGSIDGEGSGGAPDPTWVHEIFQGTLTNETRCLTCETI 301
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS++K+ C+ C S QEA
Sbjct: 302 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEHKYYCEECRSKQEAH 352
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 126 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 185
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 186 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 244
Query: 324 INEKCMKVKK 333
I + + +K
Sbjct: 245 IADILQEERK 254
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 362 ILFYQSRD 369
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGPD+FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + +K
Sbjct: 17 GANASALEKEIGPDQFPMNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARK 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CL+DLF++IAT KKKVG I PK+FI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KETLLTCLSDLFNSIATQKKKVGVIPPKRFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 136 IADLLQEEKK 145
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/231 (49%), Positives = 136/231 (58%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGPD+FP NE YFGLVN G TC + +PF E+ +
Sbjct: 17 GANASALEKEIGPDQFPMNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARK 76
Query: 58 WECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINHI 93
E L DL +S + FDNYMQQDAHEFLN+L+N I
Sbjct: 77 KETLLTCLSDLFNSIATQKKKVGVIPPKRFISRLRKENELFDNYMQQDAHEFLNYLLNTI 136
Query: 94 NEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKCLNCETV 152
+++ E+ Q KL G S G + E TWVHEIFQG LT+ET+CLNCE V
Sbjct: 137 ADLLQEEKKQEKQNGKLQ-----NGSIESDEGEKAELTWVHEIFQGALTNETRCLNCEAV 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 242
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSH+FWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHEFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLP---NGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 141/232 (60%), Gaps = 34/232 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 75
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 76 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 134
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 135 TIADILQEERKQEKQNGRLRNGDVDNEDNNSTP---DPTWVHEIFQGTLTNETRCLTCET 191
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 247 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 306
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 307 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 366
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 367 ILFYQSRD 374
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + ++
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 142/232 (61%), Gaps = 30/232 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 RKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKS-KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ E+ Q ++ KL GGG + TWVHEIFQG LT+ET+CLNCE
Sbjct: 136 IADLLQEEKSQERQQNGKLVQNGGGGVGGSDGGKETQQTWVHEIFQGTLTNETRCLNCEA 195
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 196 VSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 247
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 229 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 288
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 289 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 348
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 349 LFYQSRD 355
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 107/122 (87%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +
Sbjct: 1 QGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 60
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLN 119
Query: 323 HI 324
I
Sbjct: 120 TI 121
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 141/232 (60%), Gaps = 34/232 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 60
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 119
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 120 TIADILQEERKQEKQNGRLRNGDVDNEDNNSTP---DPTWVHEIFQGTLTNETRCLTCET 176
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 177 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 228
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 229 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 288
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 289 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 348
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 349 LFYQSRD 355
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 141/232 (60%), Gaps = 34/232 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 60
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 119
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 120 TIADILQEERKQEKQNGRLRNGDVDNEDNNSTP---DPTWVHEIFQGTLTNETRCLTCET 176
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 177 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 228
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +K
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 I 324
I
Sbjct: 121 I 121
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 352 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 411
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 412 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 471
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 472 ILFYQSRD 479
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + +K
Sbjct: 124 GANASALEKEIGPEQFPMNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK 183
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CL+DLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 184 -KESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 242
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 243 IADLLQEEKK 252
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 141/233 (60%), Gaps = 34/233 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 124 GANASALEKEIGPEQFPMNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 182
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 183 KKESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 242
Query: 93 INEVILSERPQSNAKSKL--SAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
I +++ E+ Q KL + + GGD TWVHEIFQG LT+ET+CLNCE
Sbjct: 243 IADLLQEEKKQEKQNGKLQNGSLESSGGDEGEKGDL---TWVHEIFQGTLTNETRCLNCE 299
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 300 AVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 352
>gi|29165728|gb|AAH49274.1| Ubiquitin specific peptidase 12 [Mus musculus]
Length = 250
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 124 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 183
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 184 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 243
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 244 LFYQSRD 250
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
MQQDAHEFLN+L+N I +++ ER Q +L D DN+S+ +PTWVHEIFQ
Sbjct: 1 MQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGDVDNEDNNSTP---DPTWVHEIFQ 57
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G LT+ET+CL CET+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C
Sbjct: 58 GTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECR 117
Query: 198 SYQEAQ 203
S QEA
Sbjct: 118 SKQEAH 123
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 362 ILFYQSRD 369
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + +K
Sbjct: 17 GTNASTLEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 INEKCMKVKK 333
I + ++ +K
Sbjct: 136 IADLLLEERK 145
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/236 (49%), Positives = 140/236 (59%), Gaps = 43/236 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N S LEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GTNASTLEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 KKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLS-----APDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCL 147
I +++L ER Q KL AP+ D TWVHEIFQG LT+ET+CL
Sbjct: 136 IADLLLEERKQEKQNGKLQNGTLEAPEPEKSD---------LTWVHEIFQGTLTNETRCL 186
Query: 148 NCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
NCE VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 187 NCEAVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 242
>gi|148227948|ref|NP_001080289.1| ubiquitin specific peptidase 46 [Xenopus laevis]
gi|27696466|gb|AAH44045.1| Usp46-prov protein [Xenopus laevis]
Length = 249
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 122 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 181
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 182 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 241
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 242 ILFYQSRD 249
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 92/131 (70%), Gaps = 14/131 (10%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLS-----APDGGGGDNHSSSGFEEPTWV 132
MQQDAHEFLN+L+N I +++L ER Q KL AP+ D TWV
Sbjct: 1 MQQDAHEFLNYLLNTIADLLLEERKQEKQNGKLQNGTLEAPEPEKSD---------LTWV 51
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
H+IFQG LT+ET+CLNCE VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+
Sbjct: 52 HDIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYY 111
Query: 193 CDNCASYQEAQ 203
C+ C S QEAQ
Sbjct: 112 CEQCRSKQEAQ 122
>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
kowalevskii]
Length = 349
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/130 (76%), Positives = 119/130 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRL + SDDA NPD++Y+L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLMNTSDDAFNPDKLYDL 279
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIHCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD QK+SE+GY
Sbjct: 280 VAVVIHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDLQKTSESGY 339
Query: 446 ILFYQSRDST 455
ILFYQSRD T
Sbjct: 340 ILFYQSRDGT 349
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 108/121 (89%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
GPN SALEKEIG D+FPPNE YFGLVNFGNTCY NSVLQALYFCKPFRD+VL Y+A+ KK
Sbjct: 2 GPNASALEKEIGSDQFPPNEHYFGLVNFGNTCYCNSVLQALYFCKPFRDKVLAYRAQPKK 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF+NIA+ KKKVG IAPKKFI RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 62 -KETLLTCLADLFNNIASQKKKVGVIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNT 120
Query: 324 I 324
I
Sbjct: 121 I 121
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/231 (49%), Positives = 142/231 (61%), Gaps = 40/231 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
GPN SALEKEIG D+FPPNE YFGLVN G TC K D++ ++QP
Sbjct: 2 GPNASALEKEIGSDQFPPNEHYFGLVNFGNTCYCNSVLQALYFCKPFRDKVLAYRAQPKK 61
Query: 46 EQTSL-------------QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++T L + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 62 KETLLTCLADLFNNIASQKKKVGVIAPKKFIARLRK-ENELFDNYMQQDAHEFLNYLLNT 120
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ +E+ K+ G DN EPTWVH+IFQG LT+ET+CL CE V
Sbjct: 121 IADLLQAEKQGGKPKN--------GNDNQIKP---EPTWVHDIFQGTLTNETRCLCCEAV 169
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD+ QNTSIT CLRGFSSTETLCS+ K+ C+NC S QEAQ
Sbjct: 170 SSKDEDFLDLSVDVDQNTSITHCLRGFSSTETLCSEYKYYCENCCSKQEAQ 220
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/128 (77%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 287 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 346
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 347 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 406
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 407 ILFYQSRD 414
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
Query: 196 CASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
C++ G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL
Sbjct: 54 CSNQDSIWGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVL 113
Query: 256 EYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHE 315
YK + +K KE+LL+CL+DLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHE
Sbjct: 114 AYKVQPRK-KESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHE 172
Query: 316 FLNFLINHINEKCMKVKK 333
FLN+L+N I + + KK
Sbjct: 173 FLNYLLNTIADLLQEEKK 190
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 141/232 (60%), Gaps = 35/232 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 62 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 120
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 121 KKESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 180
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKCLNCET 151
I +++ E+ Q KL G S G + + TWVHEIFQG LT+ET+CLNCE
Sbjct: 181 IADLLQEEKKQEKQNGKLQ-----NGSIESEEGDKTDLTWVHEIFQGTLTNETRCLNCEA 235
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 236 VSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 287
>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
Length = 366
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 240 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 299
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGP+RGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 300 AVVVHCGSGPHRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 359
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 360 LFYQSRD 366
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 94/123 (76%), Positives = 108/123 (87%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
A G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 11 AWGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 70
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 71 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 129
Query: 322 NHI 324
N I
Sbjct: 130 NTI 132
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 72
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 73 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +NHS+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 132 IADILQEERKQEKQNGRLPNGNIDTENNHSTP---DPTWVHEIFQGTLTNETRCLTCETI 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 239
>gi|33392730|gb|AAH55398.1| Usp12 protein, partial [Mus musculus]
Length = 165
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 39 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 98
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 99 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 158
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 159 LFYQSRD 165
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 166 IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 1 VEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 38
>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
[Ornithorhynchus anatinus]
Length = 368
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S A NPDRMY+LV
Sbjct: 242 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGGATNPDRMYDLV 301
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 302 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 361
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 362 LFYQSRD 368
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/122 (75%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +
Sbjct: 14 HGTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 73
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 74 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLN 132
Query: 323 HI 324
+
Sbjct: 133 TV 134
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 15 GTNASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 74
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 75 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 133
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ ER Q +L G D+ +++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 134 VADILQEERKQEKQNGRLP---NGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETI 190
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 191 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 241
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDR+Y+L
Sbjct: 244 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDL 303
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 304 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 363
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 364 ILFYQSRD 371
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + ++
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 141/231 (61%), Gaps = 31/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 RKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q ++ +GGG + TWVHEIFQG LT+ET+CLNCE V
Sbjct: 136 IADLLQEEKSQERQQNGKLVQNGGGEGEGGKET--QQTWVHEIFQGTLTNETRCLNCEAV 193
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 194 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 244
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDR+Y+L
Sbjct: 256 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDL 315
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 316 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 375
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 376 ILFYQSRD 383
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + ++
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKIQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 143/241 (59%), Gaps = 39/241 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L KI
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKIQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 RKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE----------EPTWVHEIFQGILTS 142
I +++ E+ Q ++ +GG G SG + TWVHEIFQG LT+
Sbjct: 136 IADLLQEEKSQERQQNGKVVQNGGSGSGGGGSGSSTGEGETEEKTQQTWVHEIFQGTLTN 195
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CLNCE VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 196 ETRCLNCEAVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 255
Query: 203 Q 203
Q
Sbjct: 256 Q 256
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDR+Y+L
Sbjct: 245 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDL 304
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 305 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 364
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 365 ILFYQSRD 372
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 106/121 (87%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + ++
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 142/232 (61%), Gaps = 32/232 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 RKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKS-KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ E+ Q ++ KL GGG + TWVHEIFQG LT+ET+CLNCE
Sbjct: 136 IADLLQEEKSQERQQNGKLGGGGGGGEGEGGKET--QQTWVHEIFQGTLTNETRCLNCEA 193
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 194 VSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 245
>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
Length = 363
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 118/128 (92%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP ILALHLKRFKYM+++NR+ K+S+RVVFPLELRLF+ SDDA NPDR+Y+L
Sbjct: 236 QKRMRVKKLPHILALHLKRFKYMEQLNRYTKLSYRVVFPLELRLFNTSDDASNPDRLYDL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVVIHCG+GPNRGHYISIVKSH WLLFDDD+VDKI+ S IE+F+G+TSD QKSSE+GY
Sbjct: 296 IAVVIHCGTGPNRGHYISIVKSHGLWLLFDDDIVDKIEVSAIEEFYGMTSDLQKSSESGY 355
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 356 ILFYQSRE 363
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 106/124 (85%), Gaps = 3/124 (2%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK--AK 260
QG N S LEKEIG D+FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK +
Sbjct: 1 QGANASNLEKEIGSDQFPTNEHYFGLVNFGNTCYCNSVLQALYFCRPFREQVLSYKQHMR 60
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N K KETLL+CLADLFHNIAT KKKVG+IAPKKFI RLRKE + FDNYMQQDAHEFLN+L
Sbjct: 61 NSK-KETLLTCLADLFHNIATQKKKVGTIAPKKFIQRLRKENELFDNYMQQDAHEFLNYL 119
Query: 321 INHI 324
+N +
Sbjct: 120 LNTV 123
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/251 (47%), Positives = 141/251 (56%), Gaps = 43/251 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G N S LEKEIG D+FP NE YFGLVN G TC + +PF EQ
Sbjct: 2 GANASNLEKEIGSDQFPTNEHYFGLVNFGNTCYCNSVLQALYFCRPFREQVLSYKQHMRN 61
Query: 48 -------TSLQD--------KISLGWECSLILELDLCSSDE-FDNYMQQDAHEFLNFLIN 91
T L D K +G L +E FDNYMQQDAHEFLN+L+N
Sbjct: 62 SKKETLLTCLADLFHNIATQKKKVGTIAPKKFIQRLRKENELFDNYMQQDAHEFLNYLLN 121
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE-----PTWVHEIFQGILTSETKC 146
+ +++ E Q K +A +G NH F + PTWVH IFQG LT+ET+C
Sbjct: 122 TVADLLQGENKQLKGGGKANAVNGA--TNHHQGNFHDNSKSDPTWVHNIFQGTLTNETRC 179
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQG-- 204
LNCETVSSKDEDF DL VD++QNTSIT CLR FSSTETLCS+ K+ C+ C S QEAQ
Sbjct: 180 LNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSSTETLCSEYKYYCEVCCSKQEAQKRM 239
Query: 205 -----PNISAL 210
P+I AL
Sbjct: 240 RVKKLPHILAL 250
>gi|432920839|ref|XP_004080002.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 367
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/128 (76%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NP+RMY+L
Sbjct: 240 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPERMYDL 299
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 300 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 359
Query: 446 ILFYQSRD 453
ILFYQSRD
Sbjct: 360 ILFYQSRD 367
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFRD+VL YK +
Sbjct: 15 TMGTNASALEKEIGHEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKVLAYKVQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
++ KE+LL+CLADLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RR-KESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 N 322
N
Sbjct: 134 N 134
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 131/231 (56%), Gaps = 35/231 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIG ++FP NE YFGLVN G TC + +PF ++ L K+
Sbjct: 17 GTNASALEKEIGHEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRDKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 RKESLLTCLADLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
GGGG + TWVHEIFQG LT+ET+CLNCE V
Sbjct: 136 XXXXXXXXXXGGGGGGGGGGGGGGGGKEI------QQTWVHEIFQGTLTNETRCLNCEAV 189
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 190 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSECKYYCEQCRSKQEAQ 240
>gi|379698942|ref|NP_001243942.1| ubiquitin carboxyl-terminal hydrolase 46 [Bombyx mori]
gi|346230198|gb|AEO21914.1| ubiquitin carboxyl-terminal hydrolase 46 [Bombyx mori]
Length = 392
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 109/173 (63%), Positives = 123/173 (71%), Gaps = 43/173 (24%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHL------------- 372
+K M+VKKLP+ILALHLKRFKYM++ NRH+KVSHRVVFPLELRLF+
Sbjct: 219 QKRMRVKKLPLILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTKRDRSSEPPTPAP 278
Query: 373 ------------------------------SDDAVNPDRMYNLVAVVIHCGSGPNRGHYI 402
SDDAVNPDR+Y+LVAVV+HCGSGPNRGHYI
Sbjct: 279 APPAPLVPPPGPVITVDVTVKPKKEKKNRKSDDAVNPDRLYDLVAVVVHCGSGPNRGHYI 338
Query: 403 SIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSRDST 455
SIVKSH FWLLFDDD+VDKID S IEDF+GLTSD QKSSETGYILFYQSRD++
Sbjct: 339 SIVKSHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSSETGYILFYQSRDAS 391
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 107/132 (81%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
+EFDNYMQQDAHEFLNFLINHINE+IL+ER QS K + + N S EPTW
Sbjct: 88 EEFDNYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSVPHNTEPTW 147
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
VHEIFQG LTSET+CLNCETVSSKDE FFDLQVD+ QNTSIT CL+ FS TETLC+DNKF
Sbjct: 148 VHEIFQGTLTSETRCLNCETVSSKDEHFFDLQVDVGQNTSITHCLKCFSDTETLCNDNKF 207
Query: 192 KCDNCASYQEAQ 203
KCDNC+SYQEAQ
Sbjct: 208 KCDNCSSYQEAQ 219
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 93/96 (96%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCYSNSVLQALYFC+PFR++VLEYKAKNK+ KETLL+CLADLF++IAT KKKVGSIA
Sbjct: 16 FGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGSIA 75
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
PKKFI RLRKEK+EFDNYMQQDAHEFLNFLINHINE
Sbjct: 76 PKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINE 111
>gi|442753601|gb|JAA68960.1| Putative ubiquitin-specific protease [Ixodes ricinus]
Length = 400
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 116/134 (86%), Gaps = 6/134 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH------LSDDAVNP 379
+K M+VKKLPMILALHLKRFKY ++ NRH K+S+RVVFPLELRLF+ SDDA NP
Sbjct: 267 QKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRLFNKLRLFNTSDDAFNP 326
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
DRMY+LVAVVIHCGSGPNRGHYISIVKSH WLLFDDD+VDKID + IEDF+GLTSD K
Sbjct: 327 DRMYDLVAVVIHCGSGPNRGHYISIVKSHGLWLLFDDDIVDKIDAAAIEDFYGLTSDTPK 386
Query: 440 SSETGYILFYQSRD 453
+SE+GYILFYQSR+
Sbjct: 387 TSESGYILFYQSRE 400
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 106/121 (87%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG D+FP NE YFGLVNFGNTCY NSVLQALYFCKPFR++VLEYKA+NK+
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLFH+IA KKK G+IAPKKFI RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENDLFDNYMQQDAHEFLNYLLNT 121
Query: 324 I 324
I
Sbjct: 122 I 122
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/266 (44%), Positives = 143/266 (53%), Gaps = 63/266 (23%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT-SLQDKISL 56
G N S LEKEIG D+FP NE YFGLVN G TC + +PF E+ + +
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S D FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENDLFDNYMQQDAHEFLNYLLNT 121
Query: 93 INEVILSERP---QSNAKSK------------------------LSAPD--------GGG 117
I +++ +E+ QSNAK L AP+ G
Sbjct: 122 IADILQAEKQTQGQSNAKGNKCSSATSASDQQGSHTPQQQTTTTLGAPNQATATAAAGTQ 181
Query: 118 GDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLR 177
++ EPTWVH+IFQG LT+ET+CLNCETVSSKDEDF DL VD+ QNTSIT CLR
Sbjct: 182 PQSNPQPHKPEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNTSITHCLR 241
Query: 178 GFSSTETLCSDNKFKCDNCASYQEAQ 203
GFS+TETLCS++K+ C+NC S QEAQ
Sbjct: 242 GFSNTETLCSEHKYYCENCCSKQEAQ 267
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 366 LFYQSRD 372
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 142/230 (61%), Gaps = 30/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L A N++S+ PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQEKTNGRL-ANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 244
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 366 LFYQSRD 372
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/230 (48%), Positives = 142/230 (61%), Gaps = 30/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L A N++S+ PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQEKTNGRL-ANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 244
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 245 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 304
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 305 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 364
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 365 LFYQSRD 371
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 142/230 (61%), Gaps = 31/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q KL+ +G +++S TWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQDKQNGKLA--NGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETI 193
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 194 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 243
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 366 LFYQSRD 372
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 30/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L A N++S+ TWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQDKTNGRL-ANGSLDSQNNNSNAPPPSTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 245
>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
gallopavo]
Length = 578
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 451 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 510
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 511 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 570
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 571 ILFYQSRE 578
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Query: 197 ASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
A A+G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL
Sbjct: 218 ARMTAARGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLS 277
Query: 257 YKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
YKA+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEF
Sbjct: 278 YKAQQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEF 336
Query: 317 LNFLINHINEKCMKVKK 333
LN+L+N I + + KK
Sbjct: 337 LNYLLNTIADILQEEKK 353
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 225 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKK 284
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 285 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 343
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + +E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 344 IADILQEEKKQEKQNGKLK---NGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETV 400
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 401 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 451
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 366 LFYQSRD 372
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 141/231 (61%), Gaps = 30/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L A NH+S+ TWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQDKTNGRL-ANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 245
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
>gi|149035244|gb|EDL89948.1| similar to ubiquitin specific protease 46 (predicted) [Rattus
norvegicus]
Length = 347
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 279
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 280 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 339
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 340 ILFYQSRE 347
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDNYMQQDAHEFLN+L+N I +++ E+ Q KL G + + + E T
Sbjct: 91 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENSKPELT 147
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQG LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K
Sbjct: 148 WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQK 207
Query: 191 FKCDNCASYQEAQ 203
+ C+ C S QEAQ
Sbjct: 208 YYCETCCSKQEAQ 220
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 229 VNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGS 288
+ FGNTCY NSVLQALYFC+PFR+ VL YKA+ KK KE LL+CLADLFH+IAT KKKVG
Sbjct: 19 LEFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK-KENLLTCLADLFHSIATQKKKVGV 77
Query: 289 IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N I + + KK
Sbjct: 78 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 122
>gi|148705919|gb|EDL37866.1| ubiquitin specific peptidase 46, isoform CRA_b [Mus musculus]
Length = 359
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 232 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 292 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 351
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 352 ILFYQSRE 359
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDNYMQQDAHEFLN+L+N I +++ E+ Q KL G + + + E T
Sbjct: 103 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELT 159
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQG LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K
Sbjct: 160 WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQK 219
Query: 191 FKCDNCASYQEAQ 203
+ C+ C S QEAQ
Sbjct: 220 YYCETCCSKQEAQ 232
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 87/105 (82%), Gaps = 1/105 (0%)
Query: 229 VNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGS 288
+ FGNTCY NSVLQALYFC+PFR+ VL YKA+ KK KE LL+CLADLFH+IAT KKKVG
Sbjct: 31 LEFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK-KENLLTCLADLFHSIATQKKKVGV 89
Query: 289 IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N I + + KK
Sbjct: 90 IPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 134
>gi|395843772|ref|XP_003794647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Otolemur garnettii]
Length = 354
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 227 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 286
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 287 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 346
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 347 ILFYQSRE 354
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 135/219 (61%), Gaps = 20/219 (9%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVNG---------------KTCKEKEDRIEKSQPFW 45
G N SALEK+IGP++FP NE YFGLVN K+KE+ + +
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNALYFCRPFRENVLAYKAQQKKKENLLTCLADLF 72
Query: 46 EQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQS 104
+ Q K + + I L +D FDNYMQQDAHEFLN+L+N I +++ E+ Q
Sbjct: 73 HSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQE 131
Query: 105 NAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQV 164
KL G + + + E TWVHEIFQG LT+ET+CLNCETVSSKDEDF DL V
Sbjct: 132 KQNGKLK---NGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSV 188
Query: 165 DIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
D++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 DVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 227
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 13/130 (10%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVN ALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVN------------ALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 120 IADILQEEKK 129
>gi|345779600|ref|XP_849650.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46 isoform 2 [Canis lupus familiaris]
Length = 389
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 262 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 321
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 322 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 381
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 382 ILFYQSRE 389
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 112/137 (81%), Gaps = 1/137 (0%)
Query: 197 ASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+ +Q G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL
Sbjct: 29 SCFQGLLGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLA 88
Query: 257 YKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
YKA+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEF
Sbjct: 89 YKAQQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEF 147
Query: 317 LNFLINHINEKCMKVKK 333
LN+L+N I + + KK
Sbjct: 148 LNYLLNTIADILQEEKK 164
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 136/231 (58%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 36 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 95
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 96 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 154
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 155 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 211
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF L VD++QNTS T CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 212 SSKDEDFLALSVDVEQNTSXTHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 262
>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
caballus]
Length = 360
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 233 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 292
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 293 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 352
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 353 ILFYQSRE 360
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+
Sbjct: 4 DKRGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQ 63
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L
Sbjct: 64 QKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYL 122
Query: 321 INHINEKCMKVKK 333
+N I + + KK
Sbjct: 123 LNTIADILQEEKK 135
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 7 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 66
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 67 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 125
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 126 IADILQEEKKQEKQNGKLK---NGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETV 182
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 183 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 233
>gi|119625839|gb|EAX05434.1| ubiquitin specific peptidase 46, isoform CRA_a [Homo sapiens]
Length = 250
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 123 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 182
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 183 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 242
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 243 ILFYQSRE 250
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 92/126 (73%), Gaps = 3/126 (2%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
MQQDAHEFLN+L+N I +++ E+ Q KL G + + + E TWVHEIFQ
Sbjct: 1 MQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQ 57
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C
Sbjct: 58 GTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 117
Query: 198 SYQEAQ 203
S QEAQ
Sbjct: 118 SKQEAQ 123
>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
Length = 382
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 255 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 314
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 315 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 374
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 375 ILFYQSRE 382
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+
Sbjct: 26 DGEGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQ 85
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L
Sbjct: 86 QKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYL 144
Query: 321 INHINEKCMKVKK 333
+N I + + KK
Sbjct: 145 LNTIADILQEEKK 157
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 29 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 88
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 89 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 147
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 148 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 204
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 205 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 255
>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
Length = 384
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 257 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 316
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 317 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 376
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 377 ILFYQSRE 384
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 31 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 90
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 91 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 149
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 150 IADILQEEKK 159
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 31 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 90
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 91 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 149
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 150 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 206
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 207 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 257
>gi|432111639|gb|ELK34741.1| Ubiquitin carboxyl-terminal hydrolase 46 [Myotis davidii]
Length = 370
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 243 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 302
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 303 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 362
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 363 ILFYQSRE 370
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 17 GTNASALEKDIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 135
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 136 IADILQEEKK 145
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 17 GTNASALEKDIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 76
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 136 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 243
>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
rubripes]
Length = 369
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 362 ILFYQSRE 369
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 136/231 (58%), Gaps = 29/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ E+ Q +L G + E TWVH+IFQG LT+ET+CLNCETV
Sbjct: 132 VADILQEEKKQEKQNGRLKNNGTAGATEAETDNKTESTWVHDIFQGTLTNETRCLNCETV 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQ 242
>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Otolemur garnettii]
Length = 366
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|351697548|gb|EHB00467.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Heterocephalus
glaber]
Length = 363
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 116/127 (91%), Gaps = 1/127 (0%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALH KRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 238 KRMKVKKLPMILALH-KRFKYMDQLHRYAKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 296
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 297 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 356
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 357 LFYQSRD 363
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 93/122 (76%), Positives = 106/122 (86%), Gaps = 1/122 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++ +
Sbjct: 1 QGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPR 60
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFITRL KE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 K-KENLLTCLADLFHSIATQKKKVGIIPPKKFITRLWKENELFDNYMQQDAHEFLNYLLN 119
Query: 323 HI 324
I
Sbjct: 120 TI 121
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 145/256 (56%), Gaps = 48/256 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 2 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 61
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 62 KENLLTCLADLFHSIATQKKKVGIIPPKKFITRL-WKENELFDNYMQQDAHEFLNYLLNT 120
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIF+G LT+E +CL CET+
Sbjct: 121 IADILQEERKQEKQNGRLPNGNIDNENNNSAP---DPTWVHEIFRGTLTNENRCLTCETI 177
Query: 153 SSKDEDFF---------DLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDFF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 178 SSKDEDFFISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 237
Query: 204 G-------PNISALEK 212
P I AL K
Sbjct: 238 KRMKVKKLPMILALHK 253
>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 362 ILFYQSRE 369
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 135/231 (58%), Gaps = 29/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ E+ Q +L + E TWVH+IFQG LT+ET+CLNCETV
Sbjct: 132 VADILQEEKKQEKQNGRLKNNGTAVATEAETDNKAESTWVHDIFQGTLTNETRCLNCETV 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQ 242
>gi|207079973|ref|NP_001128936.1| DKFZP469E158 protein [Pongo abelii]
gi|55728156|emb|CAH90828.1| hypothetical protein [Pongo abelii]
Length = 339
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 212 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 271
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 272 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 331
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 332 ILFYQSRE 339
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 98/133 (73%), Gaps = 3/133 (2%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDNYMQQDAHEFLN+L+N I +++ E+ Q KL G + + + E T
Sbjct: 83 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELT 139
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQG LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K
Sbjct: 140 WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQK 199
Query: 191 FKCDNCASYQEAQ 203
+ C+ C S QEAQ
Sbjct: 200 YYCETCCSKQEAQ 212
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCY NSVLQALYFC+PFR+ VL YKA+ KK KE LL+CLADLFH+IAT KKKVG I
Sbjct: 13 FGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK-KENLLTCLADLFHSIATQKKKVGVIP 71
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N I + + KK
Sbjct: 72 PKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 114
>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
guttata]
Length = 366
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + +E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|348571693|ref|XP_003471630.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Cavia
porcellus]
Length = 409
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 282 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 341
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 342 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 401
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 402 ILFYQSRE 409
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 56 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 115
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 116 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 174
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 175 IADILQEEKK 184
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 56 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 115
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 116 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 174
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 175 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 231
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 232 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCEMCCSKQEAQ 282
>gi|221042968|dbj|BAH13161.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 227 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 286
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 287 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 346
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 347 ILFYQSRE 354
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 134/219 (61%), Gaps = 20/219 (9%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVNG---------------KTCKEKEDRIEKSQPFW 45
G N SALEK+IGP++FP NE YFGLVN K+KE+ + +
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNALYFCRPFRENVLAYKAQQKKKENLLTCLADLF 72
Query: 46 EQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQS 104
+ Q K + + I L +D FDNYMQQDAHEFLN+L+N I +++ E+ Q
Sbjct: 73 HSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQE 131
Query: 105 NAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQV 164
KL G + + + E TWVHEIFQG L +ET+CLNCETVSSKDEDF DL V
Sbjct: 132 KQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLANETRCLNCETVSSKDEDFLDLSV 188
Query: 165 DIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
D++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 DVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 227
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 13/130 (10%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVN ALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVN------------ALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 120 IADILQEEKK 129
>gi|334331351|ref|XP_001371592.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Monodelphis domestica]
Length = 379
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 252 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 311
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 312 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 371
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 372 ILFYQSRE 379
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 112/134 (83%), Gaps = 1/134 (0%)
Query: 200 QEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
Q+ +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA
Sbjct: 22 QKTRGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKA 81
Query: 260 KNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNF 319
+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+
Sbjct: 82 QQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNY 140
Query: 320 LINHINEKCMKVKK 333
L+N I + + KK
Sbjct: 141 LLNTIADILQEEKK 154
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 137/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 26 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 85
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 86 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 144
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 145 IADILQEEKKQEKQNGKLK---NGNMNEPVENNKPELTWVHEIFQGTLTNETRCLNCETV 201
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 202 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 252
>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
Length = 360
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 233 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 292
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 293 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 352
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 353 ILFYQSRE 360
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ K
Sbjct: 6 RGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 65
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 66 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 124
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 125 TIADILQEEKK 135
Score = 191 bits (484), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 7 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 66
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 67 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 125
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 126 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKAELTWVHEIFQGTLTNETRCLNCETV 182
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 183 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 233
>gi|410957766|ref|XP_003985495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Felis catus]
Length = 369
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 362 ILFYQSRE 369
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 16 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 75
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 76 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 134
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 135 IADILQEEKK 144
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 16 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 75
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 76 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 134
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 135 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 242
>gi|29243896|ref|NP_808229.1| ubiquitin carboxyl-terminal hydrolase 46 [Mus musculus]
gi|31377709|ref|NP_073743.2| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Homo sapiens]
gi|197097492|ref|NP_001127337.1| ubiquitin carboxyl-terminal hydrolase 46 [Pongo abelii]
gi|329112531|ref|NP_001179373.2| ubiquitin carboxyl-terminal hydrolase 46 [Bos taurus]
gi|388454621|ref|NP_001253892.1| ubiquitin carboxyl-terminal hydrolase 46 [Macaca mulatta]
gi|114594803|ref|XP_517296.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Pan
troglodytes]
gi|332238466|ref|XP_003268419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Nomascus leucogenys]
gi|402869825|ref|XP_003898946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Papio anubis]
gi|426344309|ref|XP_004038716.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Gorilla gorilla gorilla]
gi|49065850|sp|P62068.1|UBP46_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|49065851|sp|P62069.1|UBP46_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|75055084|sp|Q5RBQ4.1|UBP46_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|10436670|dbj|BAB14881.1| unnamed protein product [Homo sapiens]
gi|22902225|gb|AAH37574.1| Ubiquitin specific peptidase 46 [Homo sapiens]
gi|25059082|gb|AAH39916.1| Ubiquitin specific peptidase 46 [Mus musculus]
gi|55728112|emb|CAH90806.1| hypothetical protein [Pongo abelii]
gi|74208300|dbj|BAE26353.1| unnamed protein product [Mus musculus]
gi|119625840|gb|EAX05435.1| ubiquitin specific peptidase 46, isoform CRA_b [Homo sapiens]
gi|124000509|gb|ABM87763.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|157928604|gb|ABW03598.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|319433467|gb|ADV57651.1| ubiquitin specific protease 46 [Homo sapiens]
gi|380783867|gb|AFE63809.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|384943090|gb|AFI35150.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|410210120|gb|JAA02279.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410254346|gb|JAA15140.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410289942|gb|JAA23571.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410342789|gb|JAA40341.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|417399762|gb|JAA46868.1| Putative ubiquitin carboxyl-terminal hydrolase 46 [Desmodus
rotundus]
Length = 366
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|300797766|ref|NP_001178525.1| ubiquitin carboxyl-terminal hydrolase 46 [Rattus norvegicus]
gi|319433465|gb|ADV57650.1| ubiquitin specific protease 46 [Rattus norvegicus]
Length = 366
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|395542774|ref|XP_003773300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sarcophilus
harrisii]
Length = 373
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 246 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 305
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 306 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 365
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 366 ILFYQSRE 373
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 97/133 (72%), Gaps = 3/133 (2%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDNYMQQDAHEFLN+L+N I +++ E+ Q KL G + + E T
Sbjct: 117 NDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPVENNKPELT 173
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHEIFQG LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K
Sbjct: 174 WVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQK 233
Query: 191 FKCDNCASYQEAQ 203
+ C+ C S QEAQ
Sbjct: 234 YYCETCCSKQEAQ 246
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/103 (73%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCY NSVLQALYFC+PFR+ VL YKA+ KK KE LL+CLADLFH+IAT KKKVG I
Sbjct: 47 FGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK-KENLLTCLADLFHSIATQKKKVGVIP 105
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N I + + KK
Sbjct: 106 PKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKK 148
>gi|390460899|ref|XP_002745872.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Callithrix
jacchus]
Length = 359
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 232 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 292 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 351
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 352 ILFYQSRE 359
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 65
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 66 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 124
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 125 IADILQEEKK 134
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 65
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 66 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 124
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 125 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 181
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 182 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 232
>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Oreochromis niloticus]
Length = 369
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 362 ILFYQSRE 369
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 136/231 (58%), Gaps = 29/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ E+ Q +L + EPTWVH+IFQG LT+ET+CLNCETV
Sbjct: 132 VADILQEEKKQEKQNGRLKNNGTVVTTEAETENKTEPTWVHDIFQGTLTNETRCLNCETV 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQ 242
>gi|281352654|gb|EFB28238.1| hypothetical protein PANDA_008082 [Ailuropoda melanoleuca]
gi|351697652|gb|EHB00571.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Heterocephalus
glaber]
Length = 354
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 227 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 286
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 287 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 346
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 347 ILFYQSRE 354
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 120 IADILQEEKK 129
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 120 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 176
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 177 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 227
>gi|440898709|gb|ELR50140.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Bos grunniens
mutus]
Length = 371
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 244 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 303
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 304 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 363
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 364 ILFYQSRE 371
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/143 (69%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
Query: 191 FKCDNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPF 250
F C+ + QG N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PF
Sbjct: 5 FTCNRTFAVFLFQGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPF 64
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
R+ VL YKA+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQ
Sbjct: 65 RENVLAYKAQQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQ 123
Query: 311 QDAHEFLNFLINHINEKCMKVKK 333
QDAHEFLN+L+N I + + KK
Sbjct: 124 QDAHEFLNYLLNTIADILQEEKK 146
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 18 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 77
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 78 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 136
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 137 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 193
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 194 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 244
>gi|354501689|ref|XP_003512921.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Cricetulus griseus]
Length = 459
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 332 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 391
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 392 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 451
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 452 ILFYQSRE 459
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ K
Sbjct: 105 QGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 164
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 165 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 223
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 224 TIADILQEEKK 234
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 106 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 165
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 166 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 224
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + S E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 225 IADILQEEKKQEKQNGKLK---NGNMNEPAESNKPELTWVHEIFQGTLTNETRCLNCETV 281
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 282 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 332
>gi|345310501|ref|XP_001515746.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46-like [Ornithorhynchus anatinus]
Length = 347
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 279
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 280 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 339
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 340 ILFYQSRE 347
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 137/220 (62%), Gaps = 22/220 (10%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVNG---------------KTCKEKEDRIEKSQPFW 45
G N SALEK+IGP++FP NE YFGLVN K+KE+ + +
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNALYFCRPFRENVLAYKAQQKKKENLLACLADLF 65
Query: 46 EQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQS 104
+ Q K + + I L +D FDNYMQQDAHEFLN+L+N I +++ E+ Q
Sbjct: 66 HSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQE 124
Query: 105 NAKSKL-SAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
KL + G+N S EPTWVHEIFQG LT+ET+CLNCETVSSKDEDF DL
Sbjct: 125 KPNGKLRNGHLSEAGENDKS----EPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLS 180
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 181 VDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 220
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 99/131 (75%), Gaps = 13/131 (9%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEK+IGP++FP NE YFGLVN ALYFC+PFR+ VL YKA+ K
Sbjct: 5 QGTNASALEKDIGPEQFPINEHYFGLVN------------ALYFCRPFRENVLAYKAQQK 52
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 53 K-KENLLACLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 111
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 112 TIADILQEEKK 122
>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
Length = 347
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 279
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 280 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 339
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 340 ILFYQSRE 347
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/121 (77%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 136/231 (58%), Gaps = 39/231 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKK 60
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I ++ + N K K G + + +E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 120 I-----ADMEKQNGKLK-----NGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETV 169
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 170 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 220
>gi|197116355|ref|NP_001127695.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Homo sapiens]
gi|114594805|ref|XP_001148401.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Pan
troglodytes]
gi|301768068|ref|XP_002919453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Ailuropoda melanoleuca]
gi|332238468|ref|XP_003268420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Nomascus leucogenys]
gi|397469742|ref|XP_003806502.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Pan paniscus]
gi|402869827|ref|XP_003898947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Papio anubis]
gi|403284661|ref|XP_003933679.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Saimiri
boliviensis boliviensis]
gi|426344311|ref|XP_004038717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Gorilla gorilla gorilla]
gi|221044064|dbj|BAH13709.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 232 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 292 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 351
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 352 ILFYQSRE 359
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ K
Sbjct: 5 QGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 64
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 65 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 123
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 124 TIADILQEEKK 134
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 65
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 66 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 124
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 125 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 181
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 182 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 232
>gi|344288367|ref|XP_003415922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Loxodonta
africana]
Length = 359
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 232 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 292 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 351
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 352 ILFYQSRE 359
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ K
Sbjct: 5 RGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 64
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 65 K-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 123
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 124 TIADILQEEKK 134
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 65
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 66 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 124
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 125 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 181
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 182 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 232
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 243 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 302
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 303 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 362
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 363 ILFYQSRE 370
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YK + KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 I 324
+
Sbjct: 132 V 132
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 136/232 (58%), Gaps = 30/232 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGG-GGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
+ +++ ER Q +L D +PTWVHEIFQG LT+ET+CLNCET
Sbjct: 132 VADILQEERKQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCET 191
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 VSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQ 243
>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 116/128 (90%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPM+LALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMVLALHLKRFKYMEQLRRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
carolinensis]
Length = 366
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DA+N DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAINLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPLNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/231 (46%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPLNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ E+ Q +L G + + ++ TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 VADILQEEKKQEKQNGRLR---NGNMNETEENNKQDLTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
latipes]
Length = 369
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 361
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 362 ILFYQSRE 369
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 138/234 (58%), Gaps = 35/234 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE---EPTWVHEIFQGILTSETKCLNC 149
+ +++ E+ Q +L G S E EPTWVH+IFQG LT+ET+CLNC
Sbjct: 132 VADILQEEKKQEKQNGRLK---NNGTPVTSEPEMENKIEPTWVHDIFQGTLTNETRCLNC 188
Query: 150 ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
ETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 ETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQ 242
>gi|335293447|ref|XP_003129021.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sus scrofa]
Length = 376
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 249 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 308
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 309 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 368
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 369 ILFYQSRE 376
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/133 (72%), Positives = 111/133 (83%), Gaps = 1/133 (0%)
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
E +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+
Sbjct: 20 ELEGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQ 79
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L
Sbjct: 80 QKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYL 138
Query: 321 INHINEKCMKVKK 333
+N I + + KK
Sbjct: 139 LNTIADILQEEKK 151
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 23 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 82
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 83 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 141
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 142 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 198
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 199 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 249
>gi|355749411|gb|EHH53810.1| hypothetical protein EGM_14513 [Macaca fascicularis]
Length = 401
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 274 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 333
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 334 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 393
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 394 ILFYQSRE 401
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 112/147 (76%), Gaps = 13/147 (8%)
Query: 199 YQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
+ + +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YK
Sbjct: 31 WPKGRGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYK 90
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEK------------DEFD 306
A+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FD
Sbjct: 91 AQQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENEPETEITTFCFPDLFD 149
Query: 307 NYMQQDAHEFLNFLINHINEKCMKVKK 333
NYMQQDAHEFLN+L+N I + + KK
Sbjct: 150 NYMQQDAHEFLNYLLNTIADILQEEKK 176
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 138/242 (57%), Gaps = 42/242 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 36 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 95
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILEL-----------DLCSSDEFDNYMQQD 81
KE+ + + + Q K + + I L C D FDNYMQQD
Sbjct: 96 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENEPETEITTFCFPDLFDNYMQQD 155
Query: 82 AHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILT 141
AHEFLN+L+N I +++ E+ Q KL G + + + E TWVHEIFQG LT
Sbjct: 156 AHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLT 212
Query: 142 SETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQE 201
+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QE
Sbjct: 213 NETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQE 272
Query: 202 AQ 203
AQ
Sbjct: 273 AQ 274
>gi|355687430|gb|EHH26014.1| hypothetical protein EGK_15892 [Macaca mulatta]
Length = 401
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 274 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 333
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 334 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 393
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 394 ILFYQSRE 401
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/147 (65%), Positives = 112/147 (76%), Gaps = 13/147 (8%)
Query: 199 YQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
+ + +G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YK
Sbjct: 31 WPKGRGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYK 90
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEK------------DEFD 306
A+ KK KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FD
Sbjct: 91 AQQKK-KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENEPETEITTFCFPDLFD 149
Query: 307 NYMQQDAHEFLNFLINHINEKCMKVKK 333
NYMQQDAHEFLN+L+N I + + KK
Sbjct: 150 NYMQQDAHEFLNYLLNTIADILQEEKK 176
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 138/242 (57%), Gaps = 42/242 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 36 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 95
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILEL-----------DLCSSDEFDNYMQQD 81
KE+ + + + Q K + + I L C D FDNYMQQD
Sbjct: 96 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENEPETEITTFCFPDLFDNYMQQD 155
Query: 82 AHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILT 141
AHEFLN+L+N I +++ E+ Q KL G + + + E TWVHEIFQG LT
Sbjct: 156 AHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLT 212
Query: 142 SETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQE 201
+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QE
Sbjct: 213 NETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQE 272
Query: 202 AQ 203
AQ
Sbjct: 273 AQ 274
>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
Length = 359
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 232 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD ++SE+GY
Sbjct: 292 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISQNSESGY 351
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 352 ILFYQSRE 359
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 109/131 (83%), Gaps = 1/131 (0%)
Query: 203 QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
QG N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ K
Sbjct: 5 QGTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQK 64
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K KE LL+CLADL H+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 65 K-KENLLTCLADLSHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLN 123
Query: 323 HINEKCMKVKK 333
I + + KK
Sbjct: 124 TIADILQEEKK 134
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 133/230 (57%), Gaps = 30/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEK+IGP++FP NE YFGLVN G TC + +PF E
Sbjct: 6 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 65
Query: 58 WECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINHI 93
E L DL S D FDNYMQQDAHEFLN+L+N I
Sbjct: 66 KENLLTCLADLSHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTI 125
Query: 94 NEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVS 153
+++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETVS
Sbjct: 126 ADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVS 182
Query: 154 SKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 183 SKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 232
>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
Length = 366
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S +A+N DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGEAINLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPLNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
+ + + KK
Sbjct: 132 VADILQEEKK 141
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 139/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPLNEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
+ +++ E+ Q KL + + +S +E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 VADILQEEKKQEKQNGKLKNGNVNEAEENSK---QELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>gi|86279664|gb|ABC94487.1| ubiquitin specific protease 12 like 1 [Ictalurus punctatus]
Length = 139
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/128 (75%), Positives = 116/128 (90%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K ++VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDR+Y+L
Sbjct: 12 QKRVRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDL 71
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 72 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 131
Query: 446 ILFYQSRD 453
ILFYQ RD
Sbjct: 132 ILFYQFRD 139
>gi|119628798|gb|EAX08393.1| ubiquitin specific peptidase 12, isoform CRA_b [Homo sapiens]
Length = 391
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 116/148 (78%), Gaps = 21/148 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGS---------------------GPNRGHYISIVKSHDFWLLFDDDVVDKIDQS 425
AVV+HCG GPNRGHYI+IVKSHDFWLLFDDD+V+KID
Sbjct: 304 AVVVHCGRLICRFASYESVEGVRSLIISIGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQ 363
Query: 426 TIEDFFGLTSDHQKSSETGYILFYQSRD 453
IE+F+GLTSD K+SE+GYILFYQSRD
Sbjct: 364 AIEEFYGLTSDISKNSESGYILFYQSRD 391
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>gi|391328793|ref|XP_003738868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Metaseiulus occidentalis]
Length = 334
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 114/128 (89%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +KVKKLP ILALHLKRFKY ++ NR+ K+S RVVFPLELRLF+ SDDAVN DR+Y+L
Sbjct: 207 QKSLKVKKLPPILALHLKRFKYTEQQNRNTKLSWRVVFPLELRLFNTSDDAVNGDRLYDL 266
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VA+V+HCG+GPNRGHYISIVKSH WLLFDDD+VDKID +TI+DFFGLT D K+SE+GY
Sbjct: 267 VAIVVHCGTGPNRGHYISIVKSHGVWLLFDDDIVDKIDPTTIDDFFGLTQDTPKASESGY 326
Query: 446 ILFYQSRD 453
ILFYQS++
Sbjct: 327 ILFYQSKE 334
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 81/110 (73%), Positives = 96/110 (87%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLF 276
D P ERY GLVNFGNTCY NSVLQALY+CKPFR++VLEYKAKNK+ +ETLL+CLADLF
Sbjct: 13 DAIPSTERYLGLVNFGNTCYCNSVLQALYYCKPFREKVLEYKAKNKRTRETLLTCLADLF 72
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
HNI +HKKK G++APKKFI RLRK+ + FDNY+QQDAHEFLN+L+N I +
Sbjct: 73 HNIHSHKKKTGTLAPKKFIARLRKDNEVFDNYLQQDAHEFLNYLLNTIGD 122
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 119/236 (50%), Gaps = 59/236 (25%)
Query: 14 DRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT-SLQDKISLGWECSLILELDLC 69
D P ERY GLVN G TC + +PF E+ + K E L DL
Sbjct: 13 DAIPSTERYLGLVNFGNTCYCNSVLQALYYCKPFREKVLEYKAKNKRTRETLLTCLADLF 72
Query: 70 ------------------------SSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSN 105
++ FDNY+QQDAHEFLN+L+N I +++ +E
Sbjct: 73 HNIHSHKKKTGTLAPKKFIARLRKDNEVFDNYLQQDAHEFLNYLLNTIGDLLQAE----- 127
Query: 106 AKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD 165
S +EP+WVHEIFQG L +ET+CL CET+SSKDEDF DL VD
Sbjct: 128 ------------------SISKEPSWVHEIFQGTLVNETRCLTCETISSKDEDFLDLSVD 169
Query: 166 IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
I NTSI+ CLRGFSSTETL ++K+ C+ C S QEAQ K + + PP
Sbjct: 170 ISPNTSISHCLRGFSSTETLRGEHKYHCEQCNSKQEAQ--------KSLKVKKLPP 217
>gi|156393850|ref|XP_001636540.1| predicted protein [Nematostella vectensis]
gi|156223644|gb|EDO44477.1| predicted protein [Nematostella vectensis]
Length = 386
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 115/127 (90%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP +LALHLKRFKYM+++ R+ K+S+RVVFP ELRLF+ SDDAVN D++Y+L
Sbjct: 259 QKRMRVKKLPKLLALHLKRFKYMEQLQRYTKLSYRVVFPFELRLFNTSDDAVNNDQLYDL 318
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+VVIHCGSGPNRGHYI+IVKSH FWLLFDDD+V+KI+ TIEDF+GLTSD KSSE+GY
Sbjct: 319 VSVVIHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIEPHTIEDFYGLTSDIHKSSESGY 378
Query: 446 ILFYQSR 452
ILFY++R
Sbjct: 379 ILFYEAR 385
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 104/121 (85%), Gaps = 2/121 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG + FPPNE +FGLVNFGNTCY NSVLQAL+FC+PFRD+VL YK +K+
Sbjct: 2 GANTSQLEKEIGHE-FPPNEHFFGLVNFGNTCYCNSVLQALFFCRPFRDKVLSYKPPSKR 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLF+NIA+ KKKVG IAPKKF+ RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KETLLTCLADLFNNIASQKKKVGVIAPKKFVARLRKENELFDNYMQQDAHEFLNYLLNT 119
Query: 324 I 324
I
Sbjct: 120 I 120
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 133/265 (50%), Gaps = 69/265 (26%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEKSQP---- 43
G N S LEKEIG + FPPNE +FGLVN G TC + D++ +P
Sbjct: 2 GANTSQLEKEIGHE-FPPNEHFFGLVNFGNTCYCNSVLQALFFCRPFRDKVLSYKPPSKR 60
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F S + K+ + + L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 61 KETLLTCLADLFNNIASQKKKVGVIAPKKFVARLRK-ENELFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEV----------------------------------ILSERPQSNAKSKLSAPDGGGG 118
I ++ I P A ++ P
Sbjct: 120 IADLLQGEKVKEKEKEKHSSSGSISSKGSLSSASTIGSITPAIPNGTANCIINNPTTTNS 179
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+ + E TWVHE+F+G LT+ET+CL CE+VSSKDE F DL VD++QNTSIT CLRG
Sbjct: 180 NMRT-----ETTWVHEMFEGTLTNETRCLCCESVSSKDESFLDLSVDVEQNTSITHCLRG 234
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FSSTETLCS+ K+ C+ C + QEAQ
Sbjct: 235 FSSTETLCSEYKYFCETCCTKQEAQ 259
>gi|241616763|ref|XP_002408017.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215502908|gb|EEC12402.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 351
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 106/121 (87%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG D+FP NE YFGLVNFGNTCY NSVLQALYFCKPFR++VLEYKA+NK+
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KETLL+CLADLFH+IA KKK G+IAPKKFI RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENDLFDNYMQQDAHEFLNYLLNT 121
Query: 324 I 324
I
Sbjct: 122 I 122
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/240 (47%), Positives = 135/240 (56%), Gaps = 53/240 (22%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT-SLQDKISL 56
G N S LEKEIG D+FP NE YFGLVN G TC + +PF E+ + +
Sbjct: 2 GANGSLLEKEIGHDQFPSNEHYFGLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARNKR 61
Query: 57 GWECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
E L DL S D FDNYMQQDAHEFLN+L+N
Sbjct: 62 TKETLLTCLADLFHSIANQKKKTGTIAPKKFIARLRKENDLFDNYMQQDAHEFLNYLLNT 121
Query: 93 INEVI---------LSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSE 143
I +++ +PQSN + H EPTWVH+IFQG LT+E
Sbjct: 122 IADILQGAATATAAAGTQPQSNPQP------------HKP----EPTWVHDIFQGTLTNE 165
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CLNCETVSSKDEDF DL VD+ QNTSIT CLRGFS+TETLCS++K+ C+NC S QEAQ
Sbjct: 166 TRCLNCETVSSKDEDFLDLSVDVSQNTSITHCLRGFSNTETLCSEHKYYCENCCSKQEAQ 225
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 83/128 (64%), Gaps = 1/128 (0%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKY ++ NRH K+S+RVVFPLELRLF+ +R Y
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRLFNTVSARFGLERTYVS 284
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V I S ++ K + F F KID + IEDF+GLTSD K+SE+GY
Sbjct: 285 RGVCI-ASSDQRCSCKLAQKKKYFFSEAFRSRTTQKIDAAAIEDFYGLTSDTPKTSESGY 343
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 344 ILFYQSRE 351
>gi|402591575|gb|EJW85504.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
Length = 430
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 120/139 (86%), Gaps = 3/139 (2%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K M++KKLP +LALHLKRFKY+++MNRH K+S+RV+FPLELRLF++SDDAVN DR+
Sbjct: 281 HEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFNVSDDAVNRDRL 340
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-DHQKSS 441
Y+L AVV+HCGS PNRGHYI++VKSH+FWLLFDDD+VDKID IEDFFGL+ QK+S
Sbjct: 341 YDLCAVVVHCGSTPNRGHYITLVKSHNFWLLFDDDIVDKIDPMAIEDFFGLSECGVQKNS 400
Query: 442 ETGYILFYQSRDS--TDAR 458
E+ YILFY++RD+ TD R
Sbjct: 401 ESAYILFYEARDAVNTDVR 419
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 105/141 (74%), Gaps = 16/141 (11%)
Query: 202 AQGPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
G N S+ LEKEIG D N+ ++GLVNFGNTCY NSV+QALYFC+PFR+++L+YK +
Sbjct: 12 THGANASSQLEKEIGSDHLLSNDHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQ 71
Query: 261 NKKN----KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDE-----------F 305
KK+ E LL+CLADLFHNIAT KK+VG+IAPK+FIT+L+KE E F
Sbjct: 72 LKKSYDKESENLLTCLADLFHNIATQKKRVGTIAPKRFITKLKKENGETINNIYIILGIF 131
Query: 306 DNYMQQDAHEFLNFLINHINE 326
DN+ QQDAHEFLN+L+N I+E
Sbjct: 132 DNFSQQDAHEFLNYLLNTISE 152
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 125/274 (45%), Gaps = 74/274 (27%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKT--CKEKEDRIEKSQPFWE---QTSLQDK 53
G N S+ LEKEIG D N+ ++GLVN G T C + +PF E Q Q K
Sbjct: 14 GANASSQLEKEIGSDHLLSNDHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK 73
Query: 54 ISLGWECSLILELDLCSSDEF--------------------------------------- 74
S E +L C +D F
Sbjct: 74 KSYDKESENLLT---CLADLFHNIATQKKRVGTIAPKRFITKLKKENGETINNIYIILGI 130
Query: 75 -DNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD-GGGGDN------------ 120
DN+ QQDAHEFLN+L+N I+E + E+ + + G N
Sbjct: 131 FDNFSQQDAHEFLNYLLNTISETLAEEKKAEKMEKMIRTNGMTKKGSNVILPPYEPLTLC 190
Query: 121 -----------HSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN 169
+ S + TW+ EIFQG LT+ET+CLNCETVSSKDEDF DL VD++QN
Sbjct: 191 QPSNKIKLIWLNLSGSKSDATWIQEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQN 250
Query: 170 TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SIT CLR FS ETL + K+ C+NC S EAQ
Sbjct: 251 ASITHCLRVFSDMETLQGEQKYYCENCCSKHEAQ 284
>gi|393907557|gb|EFO20320.2| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 406
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K M++KKLP +LALHLKRFKY+++MNRH K+S+RV+FPLELRLF++SDDAVN DR+
Sbjct: 257 HEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFNVSDDAVNRDRL 316
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-DHQKSS 441
Y+L AVV+HCGS PNRGHYI++VKSH+FWLLFDDD+VDKID IEDFFGL+ QK+S
Sbjct: 317 YDLCAVVVHCGSTPNRGHYITLVKSHNFWLLFDDDIVDKIDPMAIEDFFGLSECGVQKNS 376
Query: 442 ETGYILFYQSRDSTDA 457
E+ YILFY++RD+ +
Sbjct: 377 ESAYILFYEARDAVNT 392
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 106/133 (79%), Gaps = 9/133 (6%)
Query: 203 QGPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+G N S+ LEKEIG D NE ++GLVNFGNTCY NSV+QALYFC+PFR+++L+YK +
Sbjct: 7 EGANASSQLEKEIGSDHLLSNEHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQL 66
Query: 262 KKN--------KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDA 313
KK+ KE LL+CLADLFHNIAT KK+VG+IAPK+FIT+L+KE FDN+ QQDA
Sbjct: 67 KKSYDKESGREKENLLTCLADLFHNIATQKKRVGTIAPKRFITKLKKENGIFDNFSQQDA 126
Query: 314 HEFLNFLINHINE 326
HEFLN+L+N I+E
Sbjct: 127 HEFLNYLLNTISE 139
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 128/254 (50%), Gaps = 52/254 (20%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKTC--------------------------- 31
G N S+ LEKEIG D NE ++GLVN G TC
Sbjct: 8 GANASSQLEKEIGSDHLLSNEHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK 67
Query: 32 --------KEKEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDA 82
+EKE+ + + + Q K + I +L + FDN+ QQDA
Sbjct: 68 KSYDKESGREKENLLTCLADLFHNIATQKKRVGTIAPKRFITKLKK-ENGIFDNFSQQDA 126
Query: 83 HEFLNFLINHINEVILSERP--------QSNAKSKLSA-----PDGGGGDNHSSSGFEEP 129
HEFLN+L+N I+E + E+ ++N ++ A P SS +
Sbjct: 127 HEFLNYLLNTISETLAEEKKIEKMEKILRTNGMTRKGASVILPPCESLAFCQPSSSKSDA 186
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TW+ EIFQG LT+ET+CLNCETVSSKDEDF DL VD++QN SIT CLR FS ETL +
Sbjct: 187 TWIQEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNASITHCLRVFSDMETLQGEQ 246
Query: 190 KFKCDNCASYQEAQ 203
K+ C+NC S EAQ
Sbjct: 247 KYYCENCCSKHEAQ 260
>gi|312083170|ref|XP_003143749.1| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 389
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 118/136 (86%), Gaps = 1/136 (0%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K M++KKLP +LALHLKRFKY+++MNRH K+S+RV+FPLELRLF++SDDAVN DR+
Sbjct: 240 HEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFNVSDDAVNRDRL 299
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-DHQKSS 441
Y+L AVV+HCGS PNRGHYI++VKSH+FWLLFDDD+VDKID IEDFFGL+ QK+S
Sbjct: 300 YDLCAVVVHCGSTPNRGHYITLVKSHNFWLLFDDDIVDKIDPMAIEDFFGLSECGVQKNS 359
Query: 442 ETGYILFYQSRDSTDA 457
E+ YILFY++RD+ +
Sbjct: 360 ESAYILFYEARDAVNT 375
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/237 (43%), Positives = 127/237 (53%), Gaps = 35/237 (14%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWE---QTSLQDK 53
G N S+ LEKEIG D NE ++GLVN G TC + +PF E Q Q K
Sbjct: 8 GANASSQLEKEIGSDHLLSNEHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK 67
Query: 54 ISLGWECSLILE-LDLCSSDEF-------------DNYMQQDAHEFLNFLINHINEVILS 99
S E E L C +D F DN+ QQDAHEFLN+L+N I+E +
Sbjct: 68 KSYDKESGREKENLLTCLADLFHNIATQKKRVGIFDNFSQQDAHEFLNYLLNTISETLAE 127
Query: 100 ERPQSNAKSKLSAPDGGGGDNHS-------SSGFEEP------TWVHEIFQGILTSETKC 146
E+ + L +G S S F +P TW+ EIFQG LT+ET+C
Sbjct: 128 EKKIEKMEKILRT-NGMTRKGASVILPPCESLAFCQPSSKSDATWIQEIFQGTLTNETRC 186
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
LNCETVSSKDEDF DL VD++QN SIT CLR FS ETL + K+ C+NC S EAQ
Sbjct: 187 LNCETVSSKDEDFLDLSVDVEQNASITHCLRVFSDMETLQGEQKYYCENCCSKHEAQ 243
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 92/133 (69%), Gaps = 25/133 (18%)
Query: 203 QGPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+G N S+ LEKEIG D NE ++GLVNFGNTCY NSV+QALYFC+PFR+++L+YK +
Sbjct: 7 EGANASSQLEKEIGSDHLLSNEHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQL 66
Query: 262 KKN--------KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDA 313
KK+ KE LL+CLADLFHNIAT KK+VG FDN+ QQDA
Sbjct: 67 KKSYDKESGREKENLLTCLADLFHNIATQKKRVGI----------------FDNFSQQDA 110
Query: 314 HEFLNFLINHINE 326
HEFLN+L+N I+E
Sbjct: 111 HEFLNYLLNTISE 123
>gi|339255776|ref|XP_003370631.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
gi|316965826|gb|EFV50494.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
Length = 330
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 115/130 (88%), Gaps = 2/130 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KKLP+ILALHLKRFKY+++ NR+ K+S+RV+FPLELRLF+ S DAVNPDRMY+L
Sbjct: 200 QKRMRIKKLPLILALHLKRFKYVEQYNRYTKLSYRVLFPLELRLFNTSHDAVNPDRMYDL 259
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH--QKSSET 443
VAVV+HCGS PNRGHYI++VKS FWLLFDDDVVDK+D IEDFFG+ +D QK+SE+
Sbjct: 260 VAVVVHCGSTPNRGHYITVVKSQGFWLLFDDDVVDKMDHINIEDFFGMAADGSLQKNSES 319
Query: 444 GYILFYQSRD 453
GYILFYQ+RD
Sbjct: 320 GYILFYQARD 329
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 7/133 (5%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDNYMQQDAHEFLN+L+N + +++L E+ S GG E T
Sbjct: 75 NDLFDNYMQQDAHEFLNYLLNTVADILLEEKRHEKRIS-------GGHKTQVKDKLAEHT 127
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVH++FQG LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLC+++K
Sbjct: 128 WVHDVFQGTLTNETRCLNCETVSSKDEDFLDLSVDVQQNTSITHCLREFSATETLCNEHK 187
Query: 191 FKCDNCASYQEAQ 203
+ CD C S QEAQ
Sbjct: 188 YYCDICCSKQEAQ 200
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 88/106 (83%), Gaps = 3/106 (2%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK---NKETLLSCLADLFHNIATHKKKVG 287
FGNTCY NSV+QALYFC+PFR++VL YK++ KK KE LL CLADLFH+I+T K++VG
Sbjct: 1 FGNTCYCNSVIQALYFCRPFREKVLNYKSQMKKAGNQKENLLLCLADLFHSISTQKRRVG 60
Query: 288 SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+IAPKKFI RL+KE D FDNYMQQDAHEFLN+L+N + + ++ K+
Sbjct: 61 TIAPKKFIGRLKKENDLFDNYMQQDAHEFLNYLLNTVADILLEEKR 106
>gi|324515005|gb|ADY46059.1| Ubiquitin carboxyl-terminal hydrolase 46 [Ascaris suum]
Length = 392
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/131 (69%), Positives = 116/131 (88%), Gaps = 1/131 (0%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP +LALHLKRFKY+++++R+ K+S+RV+FPLELRLF++SDDAVN DR+Y+L
Sbjct: 248 QKRMRVKKLPQLLALHLKRFKYVEQLSRYTKLSYRVLFPLELRLFNVSDDAVNRDRLYDL 307
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-DHQKSSETG 444
AVV+HCGS PNRGHYI++VKSH FWLLFDDD+VDKID TIEDFFGL+ QK+SE+
Sbjct: 308 CAVVVHCGSTPNRGHYITVVKSHAFWLLFDDDIVDKIDPVTIEDFFGLSECGVQKNSESA 367
Query: 445 YILFYQSRDST 455
YILFYQ+RD+
Sbjct: 368 YILFYQARDAA 378
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 109/134 (81%), Gaps = 4/134 (2%)
Query: 204 GPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
G N S+ LEKEI + NE ++GLVNFGNTCY NSV+QALYFC+PFR+++L+YK + K
Sbjct: 2 GANASSQLEKEISSEHILSNEHFYGLVNFGNTCYCNSVIQALYFCQPFREKILQYKQQLK 61
Query: 263 KN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNF 319
K+ KE LL+CLADLFHNIAT K++VG+IAPK+FIT+L+KE + FDNYMQQDAHEFLN+
Sbjct: 62 KSGTQKENLLTCLADLFHNIATQKRRVGTIAPKRFITKLKKENEIFDNYMQQDAHEFLNY 121
Query: 320 LINHINEKCMKVKK 333
L+N I+E + K+
Sbjct: 122 LLNTISETLSEEKR 135
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 132/248 (53%), Gaps = 46/248 (18%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISL 56
G N S+ LEKEI + NE ++GLVN G TC + QPF E+ LQ K L
Sbjct: 2 GANASSQLEKEISSEHILSNEHFYGLVNFGNTCYCNSVIQALYFCQPFREKI-LQYKQQL 60
Query: 57 GWECSLILELDLCSSDEF-----------------------------DNYMQQDAHEFLN 87
+ L C +D F DNYMQQDAHEFLN
Sbjct: 61 KKSGTQKENLLTCLADLFHNIATQKRRVGTIAPKRFITKLKKENEIFDNYMQQDAHEFLN 120
Query: 88 FLINHINEVILSE-RPQSNAKSKLSAPDGGGGDNHS-----------SSGFEEPTWVHEI 135
+L+N I+E + E R + +K+ A G N S S E TW+HEI
Sbjct: 121 YLLNTISETLSEEKRSEKASKANGMAKKGSSVINPSNTHDSRSQCQPSGSKGESTWIHEI 180
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDN 195
FQG LT+ET+CLNCETVSSKDEDF DL VD++QN SIT CLR FS+ ETL +D K+ C+N
Sbjct: 181 FQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNASITHCLRVFSNMETLQADQKYYCEN 240
Query: 196 CASYQEAQ 203
C S QEAQ
Sbjct: 241 CCSKQEAQ 248
>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
[Rattus norvegicus]
gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
norvegicus]
gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
norvegicus]
Length = 363
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 112/127 (88%), Gaps = 3/127 (2%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 240 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 299
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+
Sbjct: 300 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESRD- 358
Query: 447 LFYQSRD 453
+QSRD
Sbjct: 359 --FQSRD 363
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NS+LQALYFC+PFRD+VL YK++ +K
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQPRK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 131
Query: 324 I 324
I
Sbjct: 132 I 132
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQPRK 72
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 73 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 132 IADILQEERKQEKQNGRLRNGDVDSEDNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 239
>gi|405963602|gb|EKC29164.1| Ubiquitin carboxyl-terminal hydrolase 46 [Crassostrea gigas]
Length = 1411
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 110/130 (84%), Gaps = 2/130 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP ILALHLKRFKYM+++NR K+SHRV+F ELRLF SDDA NPDRMY+L
Sbjct: 1282 QKRMRVKKLPKILALHLKRFKYMEQLNRFTKLSHRVLFTFELRLFETSDDAYNPDRMYDL 1341
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSD--HQKSSET 443
VAVVIH GS NRGHY+SIVKS FWLLFDDDVVDKID S IEDF+G++S QK+SET
Sbjct: 1342 VAVVIHIGSTLNRGHYVSIVKSDGFWLLFDDDVVDKIDPSAIEDFYGMSSADMQQKTSET 1401
Query: 444 GYILFYQSRD 453
GYILFYQSR+
Sbjct: 1402 GYILFYQSRE 1411
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/126 (73%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N S LEKEIG D+ P NE YFGLVNFGNTCY NSVLQALYFC+PFRDRVL++K
Sbjct: 1059 GNGNNYSHLEKEIGSDQLPANEHYFGLVNFGNTCYCNSVLQALYFCRPFRDRVLQFKQLQ 1118
Query: 262 KKNK-ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
K NK E+LL+CLADLF++IA+ KKKVG+IAPKKFITRLRKE D FDN+MQQDAHEFLN+L
Sbjct: 1119 KNNKKESLLTCLADLFYSIASQKKKVGTIAPKKFITRLRKEYDLFDNFMQQDAHEFLNYL 1178
Query: 321 INHINE 326
+N ++E
Sbjct: 1179 LNRVSE 1184
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/233 (44%), Positives = 137/233 (58%), Gaps = 41/233 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G N S LEKEIG D+ P NE YFGLVN G TC + DR+ +
Sbjct: 1061 GNNYSHLEKEIGSDQLPANEHYFGLVNFGNTCYCNSVLQALYFCRPFRDRVLQFKQLQKN 1120
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
+ F+ S + K+ I L D FDN+MQQDAHEFLN+L+
Sbjct: 1121 NKKESLLTCLADLFYSIASQKKKVGTIAPKKFITRLRK-EYDLFDNFMQQDAHEFLNYLL 1179
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
N ++E++ +E+ Q N K K++ G +N + + EPTWV ++FQG T+ET+CL CE
Sbjct: 1180 NRVSELLQAEK-QGN-KGKIN-----GAENQNKT---EPTWVEDLFQGTFTNETRCLTCE 1229
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
TVSSKDEDF DL VD++QNTSIT CLRGFSS ETL ++K+ C+ C + QEAQ
Sbjct: 1230 TVSSKDEDFLDLSVDVEQNTSITHCLRGFSSMETLSDEHKYYCEVCGTKQEAQ 1282
>gi|170579472|ref|XP_001894843.1| ubiquitin carboxyl-terminal hydrolase 46 [Brugia malayi]
gi|158598394|gb|EDP36295.1| ubiquitin carboxyl-terminal hydrolase 46, putative [Brugia malayi]
Length = 377
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/139 (68%), Positives = 119/139 (85%), Gaps = 4/139 (2%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K M++KKLP +LALHLKRFKY+++MNRH K+S+RV+FPLELRLF+ SDDAVN DR+
Sbjct: 229 HEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRLFN-SDDAVNRDRL 287
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-DHQKSS 441
Y+L AVV+HCGS PNRGHYI++VKSH+FWLLFDDD+VDKID IEDFFGL+ QK+S
Sbjct: 288 YDLCAVVVHCGSTPNRGHYITLVKSHNFWLLFDDDIVDKIDPMAIEDFFGLSECGVQKNS 347
Query: 442 ETGYILFYQSRDS--TDAR 458
E+ YILFY++RD+ TD R
Sbjct: 348 ESAYILFYEARDAVNTDVR 366
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 123/231 (53%), Gaps = 37/231 (16%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISL 56
G N S+ LEKEIG D ++ ++GLVN G TC + +PF E+ LQ K L
Sbjct: 11 GANASSQLEKEIGSDHLLSSDHFYGLVNFGNTCYCNSVIQALYFCRPFREKI-LQYKQQL 69
Query: 57 GWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD-G 115
+ D S FDN+ QQDAHEFLN+L+N I+E + E+ + +
Sbjct: 70 K-------KYDK-ESGIFDNFSQQDAHEFLNYLLNTISETLAEEKKAEKMEKMIRTNGMT 121
Query: 116 GGGDNHSSSGFE-----------------------EPTWVHEIFQGILTSETKCLNCETV 152
G N +E + TW+ EIFQG LT+ET+CLNCETV
Sbjct: 122 KKGSNVVLPPYEPLTLCQPSNKIKLIWLNLSGSKSDATWIQEIFQGTLTNETRCLNCETV 181
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QN SIT CLR FS ETL + K+ C+NC S EAQ
Sbjct: 182 SSKDEDFLDLSVDVEQNVSITHCLRVFSDMETLQGEQKYYCENCCSKHEAQ 232
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 72/125 (57%), Gaps = 35/125 (28%)
Query: 203 QGPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+G N S+ LEKEIG D ++ ++GLVNFGNTCY NSV+QALYFC+PFR+++L+YK +
Sbjct: 10 KGANASSQLEKEIGSDHLLSSDHFYGLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQL 69
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
KK KE FDN+ QQDAHEFLN+L+
Sbjct: 70 KK----------------------------------YDKESGIFDNFSQQDAHEFLNYLL 95
Query: 322 NHINE 326
N I+E
Sbjct: 96 NTISE 100
>gi|426375020|ref|XP_004054349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gorilla
gorilla gorilla]
Length = 329
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 120/150 (80%), Gaps = 6/150 (4%)
Query: 179 FSSTETLCSDNKFKCDNCASY----QEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNT 234
F++ + C++ K +C S + +G N SALEKEIGP++FP NE YFGLVNFGNT
Sbjct: 73 FTTFDNFCTEQK-RCITVTSLFSFCLKGRGANASALEKEIGPEQFPVNEHYFGLVNFGNT 131
Query: 235 CYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKF 294
CY NSVLQALYFC+PFR++VL YK++ +K KE+LL+CLADLFH+IAT KKKVG I PKKF
Sbjct: 132 CYCNSVLQALYFCRPFREKVLAYKSQPRK-KESLLTCLADLFHSIATQKKKVGVIPPKKF 190
Query: 295 ITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
ITRLRKE + FDNYMQQDAHEFLN+L+N I
Sbjct: 191 ITRLRKENELFDNYMQQDAHEFLNYLLNTI 220
Score = 187 bits (475), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 140/230 (60%), Gaps = 32/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 101 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 160
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 161 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 219
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 220 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 276
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 277 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 326
>gi|196005903|ref|XP_002112818.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
gi|190584859|gb|EDV24928.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
Length = 327
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 88/128 (68%), Positives = 112/128 (87%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK M+VKKLP LALHLKRFKY++ ++R+ K+S+RVVFPLE++LF++S+DA NPD+MY+L
Sbjct: 200 EKRMRVKKLPKTLALHLKRFKYVEDLHRYTKLSYRVVFPLEIKLFNMSNDATNPDQMYDL 259
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+HCGSGPNRGHYISIVKSH FWLLFDDD V+KI+ + +EDF+GL S+ KSS GY
Sbjct: 260 FAVVVHCGSGPNRGHYISIVKSHGFWLLFDDDAVEKIEPNAMEDFYGLASETYKSSAAGY 319
Query: 446 ILFYQSRD 453
ILFYQ+R+
Sbjct: 320 ILFYQARE 327
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/121 (70%), Positives = 101/121 (83%), Gaps = 3/121 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEKEIG + P NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK+ NKK
Sbjct: 2 GSNSSQLEKEIGTE-LPANEHYFGLVNFGNTCYCNSVLQALYFCRPFREQVLMYKSNNKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
++LL+CLADLF NI++ ++K+G IAPKKFI +LRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 --DSLLACLADLFKNISSQRRKIGVIAPKKFIAKLRKENDLFDNYMQQDAHEFLNYLLNT 118
Query: 324 I 324
I
Sbjct: 119 I 119
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 122/230 (53%), Gaps = 58/230 (25%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G N S LEKEIG + P NE YFGLVN G TC + +PF EQ
Sbjct: 2 GSNSSQLEKEIGTE-LPANEHYFGLVNFGNTCYCNSVLQALYFCRPFREQVLMYKSNNKK 60
Query: 48 --------------TSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHI 93
+S + KI + I +L +D FDNYMQQDAHEFLN+L+N I
Sbjct: 61 DSLLACLADLFKNISSQRRKIGVIAPKKFIAKLRK-ENDLFDNYMQQDAHEFLNYLLNTI 119
Query: 94 NEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVS 153
+++ + TWVHEIF+GIL +ET+CL CE+VS
Sbjct: 120 ADIL-----------------------------QAATWVHEIFEGILVNETRCLCCESVS 150
Query: 154 SKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KDE F DL VD+++NTSIT CL+GFSSTETL SD K+ C+ C QEA+
Sbjct: 151 CKDESFLDLSVDVEENTSITSCLKGFSSTETLRSDQKYYCEQCCGKQEAE 200
>gi|149027071|gb|EDL82820.1| rCG64153 [Rattus norvegicus]
Length = 377
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 107/121 (88%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NS+LQALYFC+PFRD+VL YK++ +K
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQPRK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 131
Query: 324 I 324
I
Sbjct: 132 I 132
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 142/231 (61%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + D++ KSQP
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSILQALYFCRPFRDKVLAYKSQPRK 72
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 73 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 132 IADILQEERKQEKQNGRLRNGDVDSEDNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 239
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/117 (73%), Positives = 103/117 (88%), Gaps = 3/117 (2%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGP 396
ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LVAVV+HCGSGP
Sbjct: 264 ILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGP 323
Query: 397 NRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSRD 453
NRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+ +QSRD
Sbjct: 324 NRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESRD---FQSRD 377
>gi|344251694|gb|EGW07798.1| Ubiquitin carboxyl-terminal hydrolase 46 [Cricetulus griseus]
Length = 333
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 120 IADILQEEKK 129
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 87/92 (94%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+LVAV
Sbjct: 202 MRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAV 261
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
V+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+
Sbjct: 262 VVHCGSGPNRGHYITIVKSHGFWLLFDDDIVE 293
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 118/205 (57%), Gaps = 32/205 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + S E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 120 IADILQEEKKQEKQNGKLK---NGNMNEPAESNKPELTWVHEIFQGTLTNETRCLNCETV 176
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLR 177
SSKDEDF DL VD++QNTSIT CLR
Sbjct: 177 SSKDEDFLDLSVDVEQNTSITHCLR 201
>gi|355727898|gb|AES09347.1| ubiquitin specific peptidase 12 [Mustela putorius furo]
Length = 305
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 17 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 76
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 77 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 135
Query: 322 NHI 324
N I
Sbjct: 136 NTI 138
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 140/230 (60%), Gaps = 32/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 19 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 78
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 79 KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 137
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 138 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 244
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 55/60 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 246 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 305
>gi|444519192|gb|ELV12645.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Tupaia
chinensis]
Length = 295
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 61 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 119
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 120 IADILQEEKK 129
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 73/92 (79%), Positives = 87/92 (94%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+LVAV
Sbjct: 202 MRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAV 261
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
V+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+
Sbjct: 262 VVHCGSGPNRGHYITIVKSHGFWLLFDDDIVE 293
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 117/205 (57%), Gaps = 32/205 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 61 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 119
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 120 IADILQEEKKQEKQNGKLK---NGNMNEPVENNKPELTWVHEIFQGTLTNETRCLNCETV 176
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLR 177
SSKDEDF DL VD++QNTSIT CLR
Sbjct: 177 SSKDEDFLDLSVDVEQNTSITHCLR 201
>gi|431893848|gb|ELK03665.1| Ubiquitin carboxyl-terminal hydrolase 46 [Pteropus alecto]
Length = 409
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 68 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 127
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 128 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 186
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 187 IADILQEEKK 196
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 68 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 127
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 128 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 186
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 187 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 243
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 244 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 294
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 105/128 (82%), Gaps = 12/128 (9%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DR+
Sbjct: 294 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRI--- 350
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
GPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 351 ---------GPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 401
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 402 ILFYQSRE 409
>gi|351705795|gb|EHB08714.1| Ubiquitin carboxyl-terminal hydrolase 12 [Heterocephalus glaber]
Length = 118
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/118 (75%), Positives = 106/118 (89%)
Query: 336 MILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSG 395
MILALHLKRFKYMD+++R+ K+S+RVVFPLEL LF+ S DA NPDRMY+LVAVV+HCGSG
Sbjct: 1 MILALHLKRFKYMDQLHRYAKLSYRVVFPLELCLFNTSGDATNPDRMYDLVAVVVHCGSG 60
Query: 396 PNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSRD 453
PNRGHYI+IVKSHDFWLLFDDD+ +KID IE+F+GLTSD K+SE+GYI+FYQ RD
Sbjct: 61 PNRGHYIAIVKSHDFWLLFDDDIAEKIDARAIEEFYGLTSDISKNSESGYIIFYQPRD 118
>gi|390337799|ref|XP_783431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Strongylocentrotus purpuratus]
Length = 370
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 115/128 (89%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP +LALHLKRFKYM++ +R+ K+S+RVVFPLELRL + SDDA PD++Y+L
Sbjct: 242 QKRMQVKKLPQLLALHLKRFKYMEQSHRYTKLSYRVVFPLELRLMNTSDDAEAPDKLYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+VV+HCGSGPNRGHYI+IVKS FWLLFDDD+V+KI+ S+IE+F+GL ++ QK+S++GY
Sbjct: 302 VSVVVHCGSGPNRGHYITIVKSFGFWLLFDDDMVEKIEISSIEEFYGLATEVQKNSDSGY 361
Query: 446 ILFYQSRD 453
ILFYQ+RD
Sbjct: 362 ILFYQARD 369
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 106/130 (81%), Gaps = 1/130 (0%)
Query: 195 NCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRV 254
+C S G N SALEKEIG D+FPP+E YFGLVNFGNTCY NSVLQALYFCKPFRDRV
Sbjct: 3 SCFSLVSRMGANASALEKEIGSDQFPPSEHYFGLVNFGNTCYCNSVLQALYFCKPFRDRV 62
Query: 255 LEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAH 314
L YK KK KETLL+CL+DLF++I T KKKVG +APKKF+ RL+KE + FDNYMQQDAH
Sbjct: 63 LAYKTAPKK-KETLLTCLSDLFNSINTQKKKVGVVAPKKFVARLKKENEVFDNYMQQDAH 121
Query: 315 EFLNFLINHI 324
EFL +L+N I
Sbjct: 122 EFLIYLLNTI 131
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 141/233 (60%), Gaps = 32/233 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG D+FPP+E YFGLVN G TC K DR+ K+ P
Sbjct: 12 GANASALEKEIGSDQFPPSEHYFGLVNFGNTCYCNSVLQALYFCKPFRDRVLAYKTAPKK 71
Query: 46 EQTSL-------------QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++T L + K+ + + L ++ FDNYMQQDAHEFL +L+N
Sbjct: 72 KETLLTCLSDLFNSINTQKKKVGVVAPKKFVARLKK-ENEVFDNYMQQDAHEFLIYLLNT 130
Query: 93 INEVILSERPQSN--AKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
I +++ +ER K K P+G N++ EPTW+HEIFQG LT+ET+CL CE
Sbjct: 131 IADLLQAERKADKIAGKGKPGTPNGIINGNNNDMK-TEPTWIHEIFQGTLTNETRCLCCE 189
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLC + K+ C+ C S QEAQ
Sbjct: 190 GVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCHEYKYYCETCCSKQEAQ 242
>gi|350535651|ref|NP_001232206.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
gi|197127197|gb|ACH43695.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
Length = 344
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + +K
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CL+DLF++IAT KKKVG I PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 136 IADLLQEEKK 145
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 116/233 (49%), Positives = 142/233 (60%), Gaps = 37/233 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 KKESLLTCLSDLFNSIATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP--TWVHEIFQGILTSETKCLNCE 150
I +++ E+ Q KL G S G ++P TWVHEIFQG LT+ET+CLNCE
Sbjct: 136 IADLLQEEKKQEKQNGKLQ-----NGSIESEEG-DKPDLTWVHEIFQGTLTNETRCLNCE 189
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 190 AVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQ 242
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 89/95 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+L
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDL 301
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+
Sbjct: 302 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVE 336
>gi|71895569|ref|NP_001026294.1| ubiquitin specific peptidase 12 pseudogene 1 [Gallus gallus]
gi|60098721|emb|CAH65191.1| hypothetical protein RCJMB04_7a13 [Gallus gallus]
Length = 192
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK + +K
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE+LL+CL+DLF++IAT KKKVG + PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KESLLTCLSDLFNSIATQKKKVGVVPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 136 IADLLQEEKK 145
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 97/180 (53%), Gaps = 35/180 (19%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEKEIGP++FP NE YFGLVN G TC + +PF E+ L K+
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKVQPR 75
Query: 58 WECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLINH 92
+ SL+ L DL +S + FDNYMQQDAHEFLN+L+N
Sbjct: 76 KKESLLTCLSDLFNSIATQKKKVGVVPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKCLNCET 151
I +++ E+ Q KL G S G + + TWVHEIFQG LT+ET+CLNCE
Sbjct: 136 IADLLQEEKKQEKQNGKLQ-----NGSIESEEGDKTDLTWVHEIFQGTLTNETRCLNCEA 190
>gi|449680173|ref|XP_002165294.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12A-like [Hydra
magnipapillata]
Length = 396
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 108/126 (85%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M VKKLP ILALHLKRFKY+++ R K+SHRV FPL+LRLF+ ++A + DR+Y+L
Sbjct: 265 QKRMMVKKLPQILALHLKRFKYVEQQQRFTKLSHRVTFPLQLRLFNTLENATHRDRLYDL 324
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+HCG+GPNRGHYI+IVKSH+ WLLFDDD+VDKI+ +IEDFFGLT+D QK+SE GY
Sbjct: 325 SAIVVHCGTGPNRGHYIAIVKSHNIWLLFDDDIVDKIETRSIEDFFGLTTDVQKNSECGY 384
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 385 ILFYES 390
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 102/121 (84%), Gaps = 2/121 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S+LEK+IG + FP NE +FGLVNFGNTCY NSVLQALYFC+PFR++VL YK NK+
Sbjct: 25 GANASSLEKDIGSE-FPINEHFFGLVNFGNTCYCNSVLQALYFCQPFREKVLSYKPLNKR 83
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CL+DLF++IAT K+K G IAPK+F+ RLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 84 -KENLLTCLSDLFNSIATQKRKTGVIAPKRFVARLRKENELFDNYMQQDAHEFLNYLLNT 142
Query: 324 I 324
I
Sbjct: 143 I 143
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/256 (41%), Positives = 139/256 (54%), Gaps = 47/256 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N S+LEK+IG + FP NE +FGLVN G TC + QPF E+ ++
Sbjct: 25 GANASSLEKDIGSE-FPINEHFFGLVNFGNTCYCNSVLQALYFCQPFREKVLSYKPLNKR 83
Query: 58 WECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINHI 93
E L DL +S + FDNYMQQDAHEFLN+L+N I
Sbjct: 84 KENLLTCLSDLFNSIATQKRKTGVIAPKRFVARLRKENELFDNYMQQDAHEFLNYLLNTI 143
Query: 94 NEVI-------LSERPQSNAKSKLSAPDGGGGDNHSSSGFE-----EPTWVHEIFQGILT 141
+++ + + S S G G + ++S F EPTWVH++F+G LT
Sbjct: 144 ADLLQGEKLKEKEKEKLGSLSSVSSKASGSSGYSTTTSQFTLKEPPEPTWVHDLFEGTLT 203
Query: 142 SETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQE 201
+ET+CL CET+SSKDE F D+ VD++QNTSI+ CL+ FS TETLCS+ K+ C+ C S QE
Sbjct: 204 NETRCLCCETLSSKDESFLDISVDVEQNTSISYCLKNFSFTETLCSEQKYFCEVCGSKQE 263
Query: 202 AQG-------PNISAL 210
AQ P I AL
Sbjct: 264 AQKRMMVKKLPQILAL 279
>gi|341877732|gb|EGT33667.1| hypothetical protein CAEBREN_23731 [Caenorhabditis brenneri]
Length = 434
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 113/140 (80%), Gaps = 12/140 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++K P +LALHLKRFKY+D +NRH K+S+RVVFPLELRLF++SDDAV DRMY+L
Sbjct: 274 QKRMRIKTPPPVLALHLKRFKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAVYGDRMYDL 333
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSD--------- 436
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K+D S++E+F G++SD
Sbjct: 334 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLDVSSMEEFSGMSSDTNIPMPPGN 393
Query: 437 ---HQKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+RD
Sbjct: 394 QSTQQKNSESAYILFYQARD 413
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 98/140 (70%), Gaps = 21/140 (15%)
Query: 208 SALEKEIGPDRFPPNERYFGLVN----------------FGNTCYSNSVLQALYFCKPFR 251
+ LEKEI E Y+GLVN FGNTCY NSV+QAL+FC+PFR
Sbjct: 7 TMLEKEISDG---SAEHYYGLVNVDIQFRLHPQYNQNFQFGNTCYCNSVIQALFFCRPFR 63
Query: 252 DRVLEYKAKNKKN--KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYM 309
+++L YK +K+ KETL++CLADLF NI T K+KVG+IAPK+FIT+L+KE + FDNYM
Sbjct: 64 EKILNYKQNLRKSSTKETLVTCLADLFQNITTQKRKVGTIAPKRFITKLKKENELFDNYM 123
Query: 310 QQDAHEFLNFLINHINEKCM 329
QQDAHEF N+L+N I+E +
Sbjct: 124 QQDAHEFFNYLLNTISETLL 143
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 97/156 (62%), Gaps = 26/156 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSN------------------AKSKLSAP-- 113
FDNYMQQDAHEF N+L+N I+E +L E+ A + S P
Sbjct: 119 FDNYMQQDAHEFFNYLLNTISETLLVEKNAERDRTARSGTIKRGNVSVNLASATASLPGE 178
Query: 114 ------DGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK 167
+G G+ + + TW+H+IFQG+LT+ET+CL+CETVSSKDE F DL +D++
Sbjct: 179 NGVGDRNGAAGEANDTRNQANNTWIHDIFQGVLTNETRCLSCETVSSKDEKFLDLSIDVE 238
Query: 168 QNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
QNTSI+ CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 239 QNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQ 274
>gi|355728105|gb|AES09417.1| ubiquitin specific peptidase 46 [Mustela putorius furo]
Length = 300
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/263 (45%), Positives = 147/263 (55%), Gaps = 46/263 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G N SALEK+IGP++FP NE YFGLVN G TC + +PF E
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 48 --------TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
T L D K+ + I L +D FDNYMQQDAHEFLN+L
Sbjct: 61 KEKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYL 119
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNC 149
+N I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNC
Sbjct: 120 LNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNC 176
Query: 150 ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQG----- 204
ETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 177 ETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVK 236
Query: 205 --PNISALEKEIGPDRFPPNERY 225
P I AL + RF ER+
Sbjct: 237 KLPMILALHLK----RFKYMERF 255
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 109/132 (82%), Gaps = 2/132 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 1 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 60
Query: 264 NKE--TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
++ LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+
Sbjct: 61 KEKKENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLL 120
Query: 322 NHINEKCMKVKK 333
N I + + KK
Sbjct: 121 NTIADILQEEKK 132
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 60/71 (84%), Gaps = 6/71 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDK------MNRHVKVSHRVVFPLELRLFHLSDDAVNP 379
+K M+VKKLPMILALHLKRFKYM++ ++R+ K+S+RVVFPLELRLF+ S DAVN
Sbjct: 230 QKRMRVKKLPMILALHLKRFKYMERFKDMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNL 289
Query: 380 DRMYNLVAVVI 390
DRMY+LVAVV+
Sbjct: 290 DRMYDLVAVVV 300
>gi|351700535|gb|EHB03454.1| Ubiquitin carboxyl-terminal hydrolase 46 [Heterocephalus glaber]
Length = 160
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++ P NE Y GLVN GNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQLPINEHYLGLVNLGNTCYCNSVLQALYFCQPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CL DLFH+IAT KKKVG I PKKFI+RLRKE D FD+YMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLTDLFHSIATQKKKVGIIPPKKFISRLRKENDLFDDYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IGDILQEEKK 141
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 62/137 (45%), Gaps = 27/137 (19%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLG 57
G N SALEK+IGP++ P NE Y GLVN G TC + QPF E
Sbjct: 13 GTNASALEKDIGPEQLPINEHYLGLVNLGNTCYCNSVLQALYFCQPFRENVLAYKAQQKK 72
Query: 58 WECSLILELDLCSS------------------------DEFDNYMQQDAHEFLNFLINHI 93
E L DL S D FD+YMQQDAHEFLN+L+N I
Sbjct: 73 KENLLTCLTDLFHSIATQKKKVGIIPPKKFISRLRKENDLFDDYMQQDAHEFLNYLLNTI 132
Query: 94 NEVILSERPQSNAKSKL 110
+++ E+ Q KL
Sbjct: 133 GDILQEEKKQEKQNGKL 149
>gi|308501535|ref|XP_003112952.1| CRE-USP-46 protein [Caenorhabditis remanei]
gi|308265253|gb|EFP09206.1| CRE-USP-46 protein [Caenorhabditis remanei]
Length = 439
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/140 (59%), Positives = 114/140 (81%), Gaps = 12/140 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KK P +LALHLKRFKY+D +NRH K+S+RVVFPLELRLF++SDDA + DRMY+L
Sbjct: 281 QKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAEHGDRMYDL 340
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-------- 437
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K+D S++E+F G+++D
Sbjct: 341 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLDVSSMEEFSGMSTDANIQMPPGN 400
Query: 438 ----QKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+R+
Sbjct: 401 QSAPQKNSESAYILFYQARN 420
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 102/148 (68%), Gaps = 22/148 (14%)
Query: 208 SALEKEIGPDRF--PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK-- 263
S LEKEI NE Y+GLVNFGNTCY NSV+QAL+FC+PFR+R+L YK KK
Sbjct: 7 SQLEKEISTTDSVNTTNEHYYGLVNFGNTCYCNSVIQALFFCRPFRERILNYKQTLKKSG 66
Query: 264 -NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKE---------------KDE--F 305
+K+ L++CLADLFHNIA K++VG+IAPK+FIT+L+KE KD F
Sbjct: 67 ASKDNLVTCLADLFHNIANQKRRVGTIAPKRFITKLKKENGNNLFTQNSYFQLSKDSELF 126
Query: 306 DNYMQQDAHEFLNFLINHINEKCMKVKK 333
DNYMQQDAHEF N+L+N I+E + KK
Sbjct: 127 DNYMQQDAHEFFNYLLNTISETLITEKK 154
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 99/159 (62%), Gaps = 26/159 (16%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLS------------APDGGGG 118
S+ FDNYMQQDAHEF N+L+N I+E +++E+ K+ AP G
Sbjct: 123 SELFDNYMQQDAHEFFNYLLNTISETLITEKKAEREKTLRHGTIKKGNVTVNMAPATAGL 182
Query: 119 DNHSSSG--------------FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQV 164
+G E TW+HEIFQGILT+ET+CL+CETVSSKDE+F DL +
Sbjct: 183 QRDDKTGERNGITVEGNDFRNSTETTWIHEIFQGILTNETRCLSCETVSSKDENFLDLSI 242
Query: 165 DIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
D++QNTSIT CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 243 DVEQNTSITHCLRVFSETETLCGDQKYFCETCSSKQEAQ 281
>gi|198417630|ref|XP_002120616.1| PREDICTED: similar to CG7023 CG7023-PB [Ciona intestinalis]
Length = 488
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 110/125 (88%), Gaps = 2/125 (1%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
M++KKLP ILALHLKRFKY + +N++ K+++RVVFP ELRL + ++DA NP+R+Y+L+AV
Sbjct: 365 MRIKKLPTILALHLKRFKYCETLNKYTKLTYRVVFPFELRLLNTTEDADNPERLYDLMAV 424
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
V+HCGSGP RGHY+SIVKSHD WLLFDDD V+K++ S +EDF+G+T+D K+SE+GYILF
Sbjct: 425 VVHCGSGPYRGHYVSIVKSHDMWLLFDDDNVEKLEPSGMEDFYGVTAD--KNSESGYILF 482
Query: 449 YQSRD 453
YQS++
Sbjct: 483 YQSKE 487
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 98/129 (75%), Gaps = 7/129 (5%)
Query: 204 GPNISA-LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA-KN 261
G N SA L KEIG D+ P NERYFGL NFGNTCY NSVLQAL+FC PFR++VL+Y++ +N
Sbjct: 10 GANASAALMKEIGIDQLPANERYFGLHNFGNTCYCNSVLQALFFCPPFREKVLQYRSQQN 69
Query: 262 KKN-----KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
K+ K++LL+CL DLF+NI++ KKK G + PKKFI RLRKE + FDNY Q DAHE
Sbjct: 70 GKHGWNGKKDSLLACLCDLFYNISSQKKKCGVLHPKKFIARLRKEYESFDNYAQHDAHEL 129
Query: 317 LNFLINHIN 325
N LIN I+
Sbjct: 130 FNHLINSIH 138
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Query: 101 RPQSNAKSKLSAPDGGGGD------NHSSSGFEE-PTWVHEIFQGILTSETKCLNCETVS 153
R + NAK + GD S G ++ TW+HEIFQG T+ T+CL CETV
Sbjct: 253 RKRKNAKKSTDSKPPENGDLPRTPTGQSEDGLDDMTTWIHEIFQGTYTTITRCLTCETVK 312
Query: 154 SKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+KDEDF DL VDI+QNTSI+ CLR FS+ +TL ++K+ C+ C S QEAQ
Sbjct: 313 NKDEDFLDLSVDIEQNTSISNCLRVFSNQQTLSGEHKYSCEVCRSKQEAQ 362
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 35/145 (24%)
Query: 1 GPNISA-LEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWE---QTSLQDK 53
G N SA L KEIG D+ P NERYFGL N G TC + PF E Q Q
Sbjct: 10 GANASAALMKEIGIDQLPANERYFGLHNFGNTCYCNSVLQALFFCPPFREKVLQYRSQQN 69
Query: 54 ISLGW--------ECSLILELDLCSS--------------------DEFDNYMQQDAHEF 85
GW C L ++ S + FDNY Q DAHE
Sbjct: 70 GKHGWNGKKDSLLACLCDLFYNISSQKKKCGVLHPKKFIARLRKEYESFDNYAQHDAHEL 129
Query: 86 LNFLINHINEVILSERPQSNAKSKL 110
N LIN I+ V+L E+ + +L
Sbjct: 130 FNHLINSIHIVLLEEKTAERERRRL 154
>gi|449512104|ref|XP_004176001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like, partial
[Taeniopygia guttata]
Length = 177
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/192 (54%), Positives = 127/192 (66%), Gaps = 17/192 (8%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCY NSVLQALYFC+PFR++VL YK + +K KE+LL+CL+DLF++IAT KKKVG I
Sbjct: 1 FGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK-KESLLTCLSDLFNSIATQKKKVGVIP 59
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALHLKRFKYMDK 350
PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N I + +L K+ K K
Sbjct: 60 PKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIAD----------LLQEEKKQEKQNGK 109
Query: 351 MNRHVKVSHRVVFPLELRLFH--LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH 408
+ S P +L H N R N A + SGPNRGHYI+IVKSH
Sbjct: 110 LQNGSIESEEGDKP-DLTWVHEIFQGTLTNETRCLNCEACSL---SGPNRGHYITIVKSH 165
Query: 409 DFWLLFDDDVVD 420
FWLLFDDD+V+
Sbjct: 166 GFWLLFDDDIVE 177
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 54/82 (65%), Gaps = 8/82 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP--TW 131
FDNYMQQDAHEFLN+L+N I +++ E+ Q KL G S G ++P TW
Sbjct: 74 FDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGKLQ-----NGSIESEEG-DKPDLTW 127
Query: 132 VHEIFQGILTSETKCLNCETVS 153
VHEIFQG LT+ET+CLNCE S
Sbjct: 128 VHEIFQGTLTNETRCLNCEACS 149
>gi|344244409|gb|EGW00513.1| Ubiquitin carboxyl-terminal hydrolase 12 [Cricetulus griseus]
Length = 279
Score = 184 bits (468), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 89/121 (73%), Positives = 101/121 (83%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSV+QALY C+PF + VL YK++ K
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVIQALYSCRPFPENVLAYKSQPPK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFITRL KE + FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KEKLLTCLADLFHSIATQKKKVGVIPPKKFITRLLKENELFDNYMQQDAHEFLNYLLNT 131
Query: 324 I 324
I
Sbjct: 132 I 132
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 137/230 (59%), Gaps = 32/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC + KSQP
Sbjct: 13 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVIQALYSCRPFPENVLAYKSQPPK 72
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 73 KEKLLTCLADLFHSIATQKKKVGVIPPKKFITRL-LKENELFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L D DN+S+ +PT VHEIFQG LT+ET+ L CET+
Sbjct: 132 IADILQEERKQEKQNGRLRNGDVDSEDNNSTP---DPTCVHEIFQGTLTNETRYLTCETI 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ S QEA
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEEYRSKQEA 238
>gi|397479331|ref|XP_003810977.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12-like [Pan paniscus]
Length = 365
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/124 (70%), Positives = 104/124 (83%), Gaps = 1/124 (0%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVV 389
KV KLPMILA HLKRFKY D+++R K+S++VVFPL+L LF+ S DA NPDRMY+LVAVV
Sbjct: 243 KVXKLPMILAPHLKRFKYKDQLHRLTKLSYQVVFPLKLSLFNTSGDATNPDRMYSLVAVV 302
Query: 390 IHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
+HCGSGP+RGH I IVKSHDFW LFDDD+V+KID IE+ +GLTSD K+SE+GY L Y
Sbjct: 303 VHCGSGPSRGHCIVIVKSHDFW-LFDDDIVEKIDAQAIEEVYGLTSDISKNSESGYNLVY 361
Query: 450 QSRD 453
QSRD
Sbjct: 362 QSRD 365
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/119 (72%), Positives = 101/119 (84%), Gaps = 1/119 (0%)
Query: 206 NISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
N SALEKEIGP++FP NE YFG V+FGNTCY NSVLQALYFC+PFR+ VL K++ +K K
Sbjct: 15 NASALEKEIGPEQFPVNEHYFGFVSFGNTCYCNSVLQALYFCRPFRETVLAXKSQPRK-K 73
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+LL+CLADLFH+IAT KKK G I PKKFITRL+KE + FDNYMQQD HEFLN+L+N I
Sbjct: 74 ESLLTCLADLFHSIATQKKKXGVIPPKKFITRLQKEDELFDNYMQQDPHEFLNYLLNTI 132
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 130/227 (57%), Gaps = 30/227 (13%)
Query: 3 NISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQTSLQDKISLGWE 59
N SALEKEIGP++FP NE YFG V+ G TC + +PF E E
Sbjct: 15 NASALEKEIGPEQFPVNEHYFGFVSFGNTCYCNSVLQALYFCRPFRETVLAXKSQPRKKE 74
Query: 60 CSLILELDLCSS-----------------------DE-FDNYMQQDAHEFLNFLINHINE 95
L DL S DE FDNYMQQD HEFLN+L+N I +
Sbjct: 75 SLLTCLADLFHSIATQKKKXGVIPPKKFITRLQKEDELFDNYMQQDPHEFLNYLLNTIAD 134
Query: 96 VILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSK 155
++ ER Q +L + +N+S+ +P VHEIFQG LT+ET+CL CET+SSK
Sbjct: 135 ILQEERKQEKQNGRLPNGNINNENNNSTP---DPMRVHEIFQGTLTNETRCLTCETMSSK 191
Query: 156 DEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
DEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 DEDFLDLSVDVEQNTSITHCLRAFSNTETLCSEYKYYCEECRSKQEA 238
>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
Length = 415
Score = 182 bits (462), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 113/139 (81%), Gaps = 11/139 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KK P +LALHLKRFKY+D +NRH K+S+RVVFPLELRLF++SDDA D++Y+L
Sbjct: 258 QKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAEEADQIYDL 317
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-------- 437
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K+D S++E+F G++++
Sbjct: 318 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLDVSSMEEFSGMSTEATAQMTSNQ 377
Query: 438 ---QKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+R+
Sbjct: 378 SAPQKNSESAYILFYQARN 396
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
Query: 208 SALEKEIGPDRFPP--NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN- 264
S LE+EI NE Y+GLVNFGNTCY NSV+QAL+FC+PFR+++L Y+ KK+
Sbjct: 7 SQLEREISRTESGTLTNEHYYGLVNFGNTCYCNSVIQALFFCRPFREKMLNYRQTLKKSG 66
Query: 265 --KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
KETL++CLADLFH+IA K++VG+IAPK+FIT+L+KE + FDNY+QQDAHEF N+L+N
Sbjct: 67 TSKETLMTCLADLFHSIANQKRRVGTIAPKRFITKLKKENESFDNYVQQDAHEFFNYLLN 126
Query: 323 HINEKCMKVKK 333
I+E + KK
Sbjct: 127 SISEALITDKK 137
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 20/152 (13%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKL--------------SAPDGGG 117
+ FDNY+QQDAHEF N+L+N I+E +++++ KS A G
Sbjct: 107 ESFDNYVQQDAHEFFNYLLNSISEALITDKKAEREKSSRHGTIKKGNVTVNMSPATAGIS 166
Query: 118 GDNHSSSGFE------EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS 171
D +G E E TW+HEIF+GILT+ETKCL+C+T S KDE+F DL +D++QNTS
Sbjct: 167 KDERERNGTEGSDSRPESTWIHEIFEGILTNETKCLSCDTKSCKDENFLDLSIDVEQNTS 226
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
IT CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 227 ITHCLRVFSETETLCGDQKYYCETCSSKQEAQ 258
>gi|193210244|ref|NP_499163.2| Protein USP-46, isoform b [Caenorhabditis elegans]
gi|148589130|emb|CAB54287.2| Protein USP-46, isoform b [Caenorhabditis elegans]
Length = 414
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 113/140 (80%), Gaps = 12/140 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KK P +LALHLKRFK+++ +NRH K+S+RVVFPLELRLF++SDDA DRMY+L
Sbjct: 256 QKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDL 315
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-------- 437
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K++ S++E+F G+++D
Sbjct: 316 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSGMSTDANIQMPPGN 375
Query: 438 ----QKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+RD
Sbjct: 376 QSAPQKNSESAYILFYQARD 395
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 101/160 (63%), Gaps = 30/160 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVIL----SERPQSNAKSKLS--------APDGGG---- 117
FDNYMQQDAHEF N+LIN I+E ++ +ER +++ L AP G
Sbjct: 97 FDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRS 156
Query: 118 ---GDNHSSSGF-----------EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
G + + G + TW+HEIFQGILT+ET+CL+CETVSSKDEDF DL
Sbjct: 157 DEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLS 216
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+D++QNTSI+ CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 217 IDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQ 256
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/130 (53%), Positives = 91/130 (70%), Gaps = 17/130 (13%)
Query: 208 SALEKEIGPDRFP--PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN- 264
S LEKEI NE Y+GLVN AL+FC+PFR++VL YK KK+
Sbjct: 7 SQLEKEISTTESVNNANEHYYGLVN------------ALFFCRPFREKVLNYKQTLKKSG 54
Query: 265 --KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K+ L++CLADLFH+IA+ K++VG+IAPK+FIT+L+KE + FDNYMQQDAHEF N+LIN
Sbjct: 55 ASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLIN 114
Query: 323 HINEKCMKVK 332
I+E ++ K
Sbjct: 115 TISETLIQEK 124
>gi|193210242|ref|NP_499162.2| Protein USP-46, isoform a [Caenorhabditis elegans]
gi|161784339|sp|P34547.3|UBPX_CAEEL RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 46;
AltName: Full=Deubiquitinating enzyme; AltName:
Full=Ubiquitin thioesterase; AltName:
Full=Ubiquitin-specific-processing protease
gi|148589129|emb|CAB54286.2| Protein USP-46, isoform a [Caenorhabditis elegans]
Length = 426
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 113/140 (80%), Gaps = 12/140 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KK P +LALHLKRFK+++ +NRH K+S+RVVFPLELRLF++SDDA DRMY+L
Sbjct: 268 QKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDL 327
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-------- 437
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K++ S++E+F G+++D
Sbjct: 328 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSGMSTDANIQMPPGN 387
Query: 438 ----QKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+RD
Sbjct: 388 QSAPQKNSESAYILFYQARD 407
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
Query: 208 SALEKEIGPDRFP--PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN- 264
S LEKEI NE Y+GLVNFGNTCY NSV+QAL+FC+PFR++VL YK KK+
Sbjct: 7 SQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSG 66
Query: 265 --KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K+ L++CLADLFH+IA+ K++VG+IAPK+FIT+L+KE + FDNYMQQDAHEF N+LIN
Sbjct: 67 ASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLIN 126
Query: 323 HINEKCMKVK 332
I+E ++ K
Sbjct: 127 TISETLIQEK 136
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 101/160 (63%), Gaps = 30/160 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVIL----SERPQSNAKSKLS--------APDGGG---- 117
FDNYMQQDAHEF N+LIN I+E ++ +ER +++ L AP G
Sbjct: 109 FDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRS 168
Query: 118 ---GDNHSSSGF-----------EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
G + + G + TW+HEIFQGILT+ET+CL+CETVSSKDEDF DL
Sbjct: 169 DEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLS 228
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+D++QNTSI+ CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 229 IDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQ 268
>gi|351715566|gb|EHB18485.1| Ubiquitin carboxyl-terminal hydrolase 46 [Heterocephalus glaber]
Length = 124
Score = 179 bits (454), Expect = 3e-42, Method: Composition-based stats.
Identities = 83/125 (66%), Positives = 105/125 (84%), Gaps = 1/125 (0%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
M+VKKLPMIL LHLKRFKYM++++R+ K+S+ VVFPLEL L ++S DAVN D MY+LVAV
Sbjct: 1 MRVKKLPMILVLHLKRFKYMEQLHRYTKLSYLVVFPLELWLLNISSDAVNLDHMYDLVAV 60
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
+ H G GPN G YI+IVKSH FWLLF D++V+KID IE+F+GLTSD K+SE+GYILF
Sbjct: 61 IFHGGGGPNHGDYITIVKSHGFWLLF-DNIVEKIDVQAIEEFYGLTSDISKNSESGYILF 119
Query: 449 YQSRD 453
+QSR+
Sbjct: 120 HQSRE 124
>gi|350645319|emb|CCD59942.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 104/124 (83%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ M++KK P++LALHLKRFKY + +NR +K+S+RV FP+ELRLF++S D+ N DR+YNL
Sbjct: 247 QRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRVAFPMELRLFNMSSDSSNDDRLYNL 306
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVV+H GSGPNRGHY+++VKSH W LFDD++V+KI ++ IEDFFG +++ KSS T Y
Sbjct: 307 MAVVVHSGSGPNRGHYVTLVKSHGLWFLFDDELVEKIHRTNIEDFFGSSTETSKSSYTAY 366
Query: 446 ILFY 449
ILFY
Sbjct: 367 ILFY 370
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/123 (62%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY--KAKN 261
G + S LEKEI D+ ERYFGLVNFGNTCY NSV+QAL+FCKPFRD+VL+Y +AKN
Sbjct: 16 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K KETLL+CL+DLF+++ + +++VG + PKKFI +L++E FDNY+QQDAHEFLN+L+
Sbjct: 76 PK-KETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKRENGLFDNYLQQDAHEFLNYLL 134
Query: 322 NHI 324
N I
Sbjct: 135 NKI 137
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 124/233 (53%), Gaps = 31/233 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G + S LEKEI D+ ERYFGLVN G TC K D++ +
Sbjct: 16 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
S F+ S Q ++ I +L + FDNY+QQDAHEFLN+L+
Sbjct: 76 PKKETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKR-ENGLFDNYLQQDAHEFLNYLL 134
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
N I ++I +E+ ++ + + S+ W+HEIFQG LT+ET+CLNC+
Sbjct: 135 NKIADIIRAEQQPIGVDAEDPSDCEMTDVSESNRKHSGRNWIHEIFQGSLTNETRCLNCD 194
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
V +K+E+F DL VD+ +N I+ CLR FS TET+ SDNK+ C+ C QEAQ
Sbjct: 195 NVRTKEENFLDLSVDVGENVDISYCLRCFSDTETMRSDNKYYCEFCRCKQEAQ 247
>gi|256070419|ref|XP_002571540.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 104/124 (83%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ M++KK P++LALHLKRFKY + +NR +K+S+RV FP+ELRLF++S D+ N DR+YNL
Sbjct: 247 QRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRVAFPMELRLFNMSSDSSNDDRLYNL 306
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVV+H GSGPNRGHY+++VKSH W LFDD++V+KI ++ IEDFFG +++ KSS T Y
Sbjct: 307 MAVVVHSGSGPNRGHYVTLVKSHGLWFLFDDELVEKIHRTNIEDFFGSSTETSKSSYTAY 366
Query: 446 ILFY 449
ILFY
Sbjct: 367 ILFY 370
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY--KAKN 261
G + S LEKEI D+ ERYFGLVNFGNTCY NSV+QAL+FCKPFRD+VL+Y +AKN
Sbjct: 16 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K KETLL+CL+DLF+++ + +++VG + PK+FI +L++E FDNY+QQDAHEFLN+L+
Sbjct: 76 PK-KETLLTCLSDLFYSVVSQQRRVGQMRPKRFIQKLKRENGLFDNYLQQDAHEFLNYLL 134
Query: 322 NHI 324
N I
Sbjct: 135 NKI 137
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/233 (38%), Positives = 124/233 (53%), Gaps = 31/233 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G + S LEKEI D+ ERYFGLVN G TC K D++ +
Sbjct: 16 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
S F+ S Q ++ I +L + FDNY+QQDAHEFLN+L+
Sbjct: 76 PKKETLLTCLSDLFYSVVSQQRRVGQMRPKRFIQKLKR-ENGLFDNYLQQDAHEFLNYLL 134
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
N I ++I +E+ ++ + + S+ W+HEIFQG LT+ET+CLNC+
Sbjct: 135 NKIADIIRAEQQPIGVDAEDPSDCEMTDVSESNRKHSGRNWIHEIFQGSLTNETRCLNCD 194
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
V +K+E+F DL VD+ +N I+ CLR FS TET+ SDNK+ C+ C QEAQ
Sbjct: 195 NVRTKEENFLDLSVDVGENVDISYCLRCFSDTETMRSDNKYYCEFCRCKQEAQ 247
>gi|340374569|ref|XP_003385810.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Amphimedon queenslandica]
Length = 349
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 109/140 (77%), Gaps = 3/140 (2%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +++KKLP ILALHLKRFK+M++++RH K+SHRVVFP EL+LF+ SDDA +PDRMY+L+
Sbjct: 209 KRLRIKKLPTILALHLKRFKFMEQLHRHTKLSHRVVFPWELKLFNTSDDASDPDRMYDLI 268
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS--SETG 444
VVIHCG+GPNRGHYIS++KSH +WL + +I+ +IE FFGLT D Q S +E+
Sbjct: 269 GVVIHCGTGPNRGHYISVIKSHGYWLXXXXXXLQEIEPHSIEQFFGLT-DSQTSLPNESA 327
Query: 445 YILFYQSRDSTDARTMNSND 464
YILFY++R+S M + D
Sbjct: 328 YILFYKTRESEYTYEMVNED 347
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 90/121 (74%), Gaps = 4/121 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LE+ ++ P +ERY GL NFGNTCY+NSVLQALYFC PFR++VL+Y +K
Sbjct: 2 GANGSTLER---LEQLPEDERYNGLTNFGNTCYANSVLQALYFCLPFREKVLQYSHGEEK 58
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
ETLLS L+DLF +++ KKK G +AP+KFI R++KE FDN QQDAHEFLN+L+N
Sbjct: 59 T-ETLLSALSDLFIQMSSSKKKFGVVAPRKFIQRVKKENVVFDNMQQQDAHEFLNYLLNT 117
Query: 324 I 324
I
Sbjct: 118 I 118
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 123/230 (53%), Gaps = 52/230 (22%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK-------EDR 37
G N S LE+ ++ P +ERY GL N G TC +EK E++
Sbjct: 2 GANGSTLER---LEQLPEDERYNGLTNFGNTCYANSVLQALYFCLPFREKVLQYSHGEEK 58
Query: 38 IEK-----SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
E S F + +S + K + I + + FDN QQDAHEFLN+L+N
Sbjct: 59 TETLLSALSDLFIQMSSSKKKFGVVAPRKFIQRVKK-ENVVFDNMQQQDAHEFLNYLLNT 117
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ++ P+S+ + TW+H+IFQG+L +ETKCL+CETV
Sbjct: 118 IADLLKAQMPESSEDTN--------------------TWIHDIFQGVLVNETKCLSCETV 157
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SK EDF DL VDI+QN+SIT CL+ FS +ETL S+ K+ C+ C S QEA
Sbjct: 158 RSKQEDFLDLSVDIEQNSSITHCLKMFSGSETLSSEYKYYCEQCCSKQEA 207
>gi|56758386|gb|AAW27333.1| SJCHGC05977 protein [Schistosoma japonicum]
Length = 412
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 103/124 (83%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ M++KK P++LALHLKRFKY + +NR +K+S+RV FP+ELRLF+ S D+ N DR+Y+L
Sbjct: 248 QRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRVAFPMELRLFNTSSDSSNADRLYSL 307
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
+AVV+H GSGPNRGHYI++VKSH W LFDD++V+KI ++ IEDFFG +++ KSS T Y
Sbjct: 308 MAVVVHSGSGPNRGHYITLVKSHGLWFLFDDELVEKIHRTNIEDFFGSSTETSKSSYTAY 367
Query: 446 ILFY 449
ILFY
Sbjct: 368 ILFY 371
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/123 (62%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY--KAKN 261
G + S LEKEI D+ ERYFGLVNFGNTCY NSV+QAL+FCKPFRD+VL+Y +AKN
Sbjct: 16 GLSSSQLEKEIASDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K KETLL+CL+DLF+++ + +++VG + PKKFI +L++E FDNY+QQDAHEFLN+L+
Sbjct: 76 PK-KETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKRENGLFDNYLQQDAHEFLNYLL 134
Query: 322 NHI 324
N I
Sbjct: 135 NKI 137
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 126/234 (53%), Gaps = 32/234 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G + S LEKEI D+ ERYFGLVN G TC K D++ +
Sbjct: 16 GLSSSQLEKEIASDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 75
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
S F+ S Q ++ I +L + FDNY+QQDAHEFLN+L+
Sbjct: 76 PKKETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKR-ENGLFDNYLQQDAHEFLNYLL 134
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGD-NHSSSGFEEPTWVHEIFQGILTSETKCLNC 149
N I ++I +E+ + + + + D D + + W+HEIFQG LT+ET+CLNC
Sbjct: 135 NKIADIIRAEQQSTEVEGEDDSNDSEVTDVSENMKKHNGRNWIHEIFQGSLTNETRCLNC 194
Query: 150 ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+ V +K+E+F DL VD+ +N I+ CLR FS TET+ SDNK+ C+ C QEAQ
Sbjct: 195 DNVRTKEENFLDLSVDVGENVDISYCLRCFSETETMRSDNKYYCEFCRCKQEAQ 248
>gi|351703173|gb|EHB06092.1| Ubiquitin carboxyl-terminal hydrolase 46 [Heterocephalus glaber]
Length = 148
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 81/121 (66%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++ P E YFGLV+FGNTCY NSVLQALYFC FR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQLPIKEHYFGLVDFGNTCYCNSVLQALYFCTLFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+ L+CL DLFH+IAT KKKVG I PKKFI+RL+KE D F NYMQQ HEF N+L+N
Sbjct: 73 KEN--LTCLTDLFHSIATQKKKVGVIPPKKFISRLQKENDLFGNYMQQGTHEFFNYLLNT 130
Query: 324 I 324
I
Sbjct: 131 I 131
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 28/137 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++ P E YFGLV+ G TC K+
Sbjct: 13 GTNASALEKDIGPEQLPIKEHYFGLVDFGNTCYCNSVLQALYFCTLFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHI 93
KE+ + F + + K+ + I L +D F NYMQQ HEF N+L+N I
Sbjct: 73 KENLTCLTDLFHSIATQKKKVGVIPPKKFISRLQK-ENDLFGNYMQQGTHEFFNYLLNTI 131
Query: 94 NEVILSERPQSNAKSKL 110
+++ E+ Q K
Sbjct: 132 VDIMQEEKKQKKQNGKF 148
>gi|221041392|dbj|BAH12373.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 89/95 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 123 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 182
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+
Sbjct: 183 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVE 217
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 92/126 (73%), Gaps = 3/126 (2%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
MQQDAHEFLN+L+N I +++ E+ Q KL G + + + E TWVHEIFQ
Sbjct: 1 MQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQ 57
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G LT+ET+CLNCETVSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C
Sbjct: 58 GTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 117
Query: 198 SYQEAQ 203
S QEAQ
Sbjct: 118 SKQEAQ 123
>gi|148705918|gb|EDL37865.1| ubiquitin specific peptidase 46, isoform CRA_a [Mus musculus]
Length = 127
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 74/95 (77%), Positives = 89/95 (93%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 11 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 70
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+
Sbjct: 71 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVE 105
>gi|69049201|gb|AAY99774.1| deubiquitinating enzyme 12 [Schistosoma mansoni]
gi|70609305|gb|AAZ04777.1| deubiquitinating enzyme 12 [Schistosoma mansoni]
Length = 243
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/123 (62%), Positives = 100/123 (81%), Gaps = 3/123 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY--KAKN 261
G + S LEKEI D+ ERYFGLVNFGNTCY NSV+QAL+FCKPFRD+VL+Y +AKN
Sbjct: 13 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 72
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K KETLL+CL+DLF+++ + +++VG + PKKFI +L++E FDNY+QQDAHEFLN+L+
Sbjct: 73 PK-KETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKRENGLFDNYLQQDAHEFLNYLL 131
Query: 322 NHI 324
N I
Sbjct: 132 NKI 134
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 123/232 (53%), Gaps = 31/232 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G + S LEKEI D+ ERYFGLVN G TC K D++ +
Sbjct: 13 GLSSSQLEKEIAGDQLLSGERYFGLVNFGNTCYCNSVIQALFFCKPFRDKVLQYNDRAKN 72
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
S F+ S Q ++ I +L + FDNY+QQDAHEFLN+L+
Sbjct: 73 PKKETLLTCLSDLFYSVVSQQRRVGQMRPKKFIQKLKR-ENGLFDNYLQQDAHEFLNYLL 131
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
N I ++I +E+ ++ + + S+ W+HEIFQG LT+ET+CLNC+
Sbjct: 132 NKIADIIRAEQQPIGVDAEDPSDCEMTDVSESNRKHSGRNWIHEIFQGSLTNETRCLNCD 191
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
V +K+E+F DL VD+ +N I+ CLR FS TET+ SDNK+ C+ C QEA
Sbjct: 192 NVRTKEENFLDLSVDVGENVDISYCLRCFSDTETMRSDNKYYCEFCRCKQEA 243
>gi|320165578|gb|EFW42477.1| ubiquitin specific peptidase 12 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/129 (58%), Positives = 101/129 (78%), Gaps = 5/129 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLP +LALHLKRFKY++++ R+ K+ HRV FPLELRLF SD+ Y+L
Sbjct: 282 QKRMRVKKLPKVLALHLKRFKYIEELQRYRKLHHRVAFPLELRLFETSDE---DSAFYDL 338
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH--QKSSET 443
V++V+H GSGPNRGHYI+IVKSH +WL FDDD VD +++S ++ +FG T D Q+SSE
Sbjct: 339 VSIVVHVGSGPNRGHYIAIVKSHGYWLSFDDDYVDLVEESNLQLYFGSTLDRNDQQSSEC 398
Query: 444 GYILFYQSR 452
GYILFY++R
Sbjct: 399 GYILFYEAR 407
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 89/164 (54%), Gaps = 42/164 (25%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY------ 257
G + S +EK +G P +ERYFGL NFGNTCY NSVLQALYFC+PFRD + E
Sbjct: 2 GNSASRVEKTLG-QAVPEHERYFGLENFGNTCYCNSVLQALYFCQPFRDGIRERIQSHLA 60
Query: 258 -----------------------KAKNKKN------------KETLLSCLADLFHNIATH 282
A N +ETL+SCL DLF +IA
Sbjct: 61 ATGGGLTPTPTTSTAMMTTGPIGLATNSPTTTSQAAVAPVPQEETLMSCLCDLFGSIAAQ 120
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
K++ G +AP+KF+ RLRKE + F YM QDAHEF N+L+N + E
Sbjct: 121 KRRTGVMAPRKFVARLRKENELFRGYMHQDAHEFFNYLVNTLVE 164
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/140 (46%), Positives = 88/140 (62%), Gaps = 10/140 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF------- 126
F YM QDAHEF N+L+N + E++ E + + S + +++
Sbjct: 143 FRGYMHQDAHEFFNYLVNTLVELLQREIKDARQLQQASRKSSAASGSAAAAAAPTSSSAP 202
Query: 127 ---EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTE 183
E TWVH+IF+G LT+ETKCL CE+VSSKDE F DL +DI+Q++SIT CLR FS+TE
Sbjct: 203 TAKEIKTWVHDIFEGTLTNETKCLTCESVSSKDESFLDLSIDIEQHSSITSCLRNFSATE 262
Query: 184 TLCSDNKFKCDNCASYQEAQ 203
TL SD K+ C+ C + QEAQ
Sbjct: 263 TLQSDQKYFCEQCCALQEAQ 282
>gi|452822703|gb|EME29720.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Galdieria sulphuraria]
Length = 444
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/126 (56%), Positives = 103/126 (81%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ +++KKLP ILALHLKRFK+M++ R+ K+S+RVVFPL+LRLF++S+DA +PDR+Y+L
Sbjct: 313 ERSVRIKKLPYILALHLKRFKFMEQYQRYKKLSYRVVFPLQLRLFNVSEDAEDPDRLYSL 372
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVVIH GSGPN GHY+ ++KS+ W+LFDD+ V+ D++ +E FG + + SS+ GY
Sbjct: 373 VAVVIHVGSGPNHGHYVCLIKSYGRWILFDDECVELKDENDLEAVFGSSFEMGPSSDAGY 432
Query: 446 ILFYQS 451
ILFY++
Sbjct: 433 ILFYET 438
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 87/131 (66%), Gaps = 4/131 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWV 132
F M QDAHEFLNF++N I E++ +R + K K++ G + + G + P TWV
Sbjct: 186 FSGCMHQDAHEFLNFILNEIVEIL--QREEEAKKQKITK-KGRNSLDKTDEGSDSPRTWV 242
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
H++F+G+LT+E +CL+CE V+ + E FFDL VDI QN+SIT CLR F STE L +KF
Sbjct: 243 HDLFEGLLTNEVRCLSCENVTQRVESFFDLSVDIDQNSSITSCLRNFCSTELLTKHDKFF 302
Query: 193 CDNCASYQEAQ 203
CD C S QEA+
Sbjct: 303 CDACCSLQEAE 313
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 49/63 (77%)
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+KE LL+CLADLF+ I T +K++GSIAPKKFI RLRK+ F M QDAHEFLNF++N
Sbjct: 145 DKENLLTCLADLFYQINTQRKRIGSIAPKKFIERLRKDNQLFSGCMHQDAHEFLNFILNE 204
Query: 324 INE 326
I E
Sbjct: 205 IVE 207
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 48/69 (69%), Gaps = 5/69 (7%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
A G ALE E+ P +ERYFGL NFGNTCY +SVLQALYFCKPFR+RVL YK +
Sbjct: 8 ASGKLEKALETEL-----PDDERYFGLENFGNTCYCSSVLQALYFCKPFRERVLAYKKEL 62
Query: 262 KKNKETLLS 270
K ++ L S
Sbjct: 63 LKRQQELES 71
>gi|149512100|ref|XP_001507651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ornithorhynchus anatinus]
Length = 201
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 95/130 (73%), Gaps = 4/130 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FDNYMQQDAHEFLN+L+N I +++ E+ Q +L G S E TWVH
Sbjct: 74 FDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGRLQ----NGSIECEESDKTESTWVH 129
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EIFQG LT+ET+CLNCE+VSSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C
Sbjct: 130 EIFQGTLTNETRCLNCESVSSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYC 189
Query: 194 DNCASYQEAQ 203
+ C S QEAQ
Sbjct: 190 EQCRSKQEAQ 199
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/94 (74%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIA 290
FGNTCY NSVLQALYFC+PFR++VL YK + +K KE+LL+CL+DLF+NIAT KKKVG I
Sbjct: 1 FGNTCYCNSVLQALYFCRPFREKVLAYKVQPRK-KESLLTCLSDLFNNIATQKKKVGVIP 59
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
PKKFI+RLRKE + FDNYMQQDAHEFLN+L+N I
Sbjct: 60 PKKFISRLRKENELFDNYMQQDAHEFLNYLLNTI 93
>gi|443896260|dbj|GAC73604.1| ubiquitin-specific protease [Pseudozyma antarctica T-34]
Length = 1074
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R+VK+++RVVFPLELRLF+ SDDA +PDR+Y L
Sbjct: 504 EKRMKIKKLPNLLALHLKRFKYEETVQRYVKLAYRVVFPLELRLFNTSDDAEDPDRLYEL 563
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYI++VK D W+ FDDDVV ID++ I ++G + + Y
Sbjct: 564 CAIVVHIGAGPHHGHYIAVVKVGDRWVQFDDDVVTYIDEAEIAKYYG----DRPGLGSAY 619
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 620 VLFYQAVD 627
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 13/143 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVIL------------SERPQSNAKSKL-SAPDGGGGDN 120
FD+ M QDAHE LNF++N + E ++ S P NA+S+ D +N
Sbjct: 362 FDSTMHQDAHEMLNFVLNKVGEDLIDADKARTRVKMQSRNPYLNARSESDKTVDAHRRNN 421
Query: 121 HSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
G T VH +F+G+LT+ET+CL CET++S+DE F DL +DI+QN+S+T CLR FS
Sbjct: 422 VMEVGPSGKTCVHRLFEGVLTNETRCLTCETITSRDECFLDLSIDIEQNSSVTSCLRQFS 481
Query: 181 STETLCSDNKFKCDNCASYQEAQ 203
++E L S NKF CD+C+ QEA+
Sbjct: 482 ASEMLRSRNKFFCDSCSGLQEAE 504
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET 267
G+ NFGNTCY NS+LQ+LYFC+PFRD VL Y ++ E+
Sbjct: 139 LGMENFGNTCYVNSMLQSLYFCRPFRDSVLSYNVAHRDRSES 180
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
V S A K F+ L++E FD+ M QDAHE LNF++N + E + K
Sbjct: 343 VDSNAVKAFLGTLKRENVLFDSTMHQDAHEMLNFVLNKVGEDLIDADK 390
>gi|403164667|ref|XP_003324741.2| hypothetical protein PGTG_06278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165262|gb|EFP80322.2| hypothetical protein PGTG_06278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1285
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R+ K+++RVVFP EL+LF+ +DD +PDR+Y L
Sbjct: 456 EKRMKIKKLPNVLALHLKRFKYQENLQRYTKLTYRVVFPFELKLFNTTDDIQDPDRLYEL 515
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+KSH WLLFDD++V +I++ I+ ++G T +GY
Sbjct: 516 WAIVVHIGAGPHHGHYVTILKSHGQWLLFDDNIVTRIEERDIQKYYGDT----PGVGSGY 571
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 572 VLFYQATD 579
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 92/154 (59%), Gaps = 17/154 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQS---NAKSKLSAPDGGGGDN-------HSS 123
F + M QDAHEFLN+L+N + E + +E+ + + +S L P N S
Sbjct: 317 FRSTMHQDAHEFLNYLVNSVAEDVFAEQEKKRLEDERSSLLEPTPPSLQNLNNTSTPSSK 376
Query: 124 SGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTE 183
G TWVH +F+G LT+ETKCL CETV+ +DE F DL ++I QNTS+T CLR FS++E
Sbjct: 377 KGHPRSTWVHRLFEGTLTNETKCLTCETVTQRDESFLDLSINIHQNTSLTACLRQFSASE 436
Query: 184 TLCSDNKFKCDNCASYQEAQG-------PNISAL 210
LC NKF CD C S QEA+ PN+ AL
Sbjct: 437 MLCQKNKFSCDQCCSLQEAEKRMKIKKLPNVLAL 470
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
T+ S L DLF +I+T VG++AP+ FIT L++ + F + M QDAHEFLN+L+N + E
Sbjct: 279 TICSSLRDLFRHISTQPNSVGAVAPQAFITTLKRYNELFRSTMHQDAHEFLNYLVNSVAE 338
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
+E+YFG+ NFGNTCY+NSVLQALYFCKPFR ++LE +
Sbjct: 35 DEKYFGMENFGNTCYANSVLQALYFCKPFR-QLLELSS 71
>gi|336377045|gb|EGO05380.1| hypothetical protein SERLA73DRAFT_83040 [Serpula lacrymans var.
lacrymans S7.3]
Length = 933
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 96/128 (75%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + +++K+++RV FP ELRLF+ DDA NPDR+Y L
Sbjct: 286 EKRMKIKRLPNVLALHLKRFKYQEDVQKYIKLAYRVAFPFELRLFNTVDDAQNPDRLYEL 345
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY+SI+++ FWL+FDDD VD I +S I +FG +S + Y
Sbjct: 346 FAIVVHIGTGPHHGHYVSIIRTMGFWLIFDDDTVDTIKESDIPKYFG-----DSNSGSAY 400
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 401 VLYYQAVD 408
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 16/153 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERP--QSNAKSKLSAPDG-------GGGDNHSSS 124
F + M QDAHEF N+L+N I E + ER Q+ S P+ + S
Sbjct: 148 FRSTMHQDAHEFSNYLLNRIVEEMEDERKHYQTAVPSGDDLPNSVRAMSMTAANSSSSGG 207
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTET 184
+ T++H+IF+GILTSET+CL CE VS++DE F DL +DI+QN+S+T CLR FS++E
Sbjct: 208 PSQGATFIHKIFEGILTSETRCLTCENVSARDESFLDLSIDIEQNSSVTACLRQFSASEM 267
Query: 185 LCSDNKFKCDNCASYQEAQG-------PNISAL 210
LC NKF CD+C QEA+ PN+ AL
Sbjct: 268 LCQKNKFFCDSCCDLQEAEKRMKIKRLPNVLAL 300
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%), Gaps = 47/138 (34%)
Query: 243 ALYFCKPFRDRVLEYKAKN----------------------------------------- 261
ALYFC PFR+ V+++ N
Sbjct: 39 ALYFCSPFRELVIQHPDLNTLQSLKPPTPTATHTSPSPSSPPHRRRVERRNTTDSHPNGI 98
Query: 262 ------KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHE 315
+ TL S L L+ +I+ + G++AP+ FI +L++ + F + M QDAHE
Sbjct: 99 SSGPTIPTSPRTLFSALRSLYIHISDNPVDKGTVAPRAFIDKLKELNELFRSTMHQDAHE 158
Query: 316 FLNFLINHINEKCMKVKK 333
F N+L+N I E+ +K
Sbjct: 159 FSNYLLNRIVEEMEDERK 176
>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 71/128 (55%), Positives = 100/128 (78%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKY++++ R+ K+S+RVVFPLEL+L + +DDA + Y+L
Sbjct: 241 QKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSL 300
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG T ++ +++ GY
Sbjct: 301 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGY 360
Query: 446 ILFYQSRD 453
ILFY+S D
Sbjct: 361 ILFYESLD 368
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 138/241 (57%), Gaps = 39/241 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G + S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GASSSKLEKVLG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYCGQKKP 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 VAESEENLLTCLSELFTQINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKS-KLSAPD---GGGGDNHSSSG-FEEP--TWVHEIFQGILTS 142
+N + ++++ E +N+ S ++P+ G G N ++G +EP TWVH+IFQG LT+
Sbjct: 121 LNELVDILVKEAQAANSNSGSHTSPEKVVGNGATNGLANGNHKEPVVTWVHKIFQGTLTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CET++++DE F DL +DI+QN+SIT CLR FSSTETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK- 262
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY + K
Sbjct: 2 GASSSKLEKVLG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYCGQKKP 60
Query: 263 --KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+++E LL+CL++LF I + KKK G IAPK+F+ R+RK+ + F +YM QDAHEFLNFL
Sbjct: 61 VAESEENLLTCLSELFTQINSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/125 (55%), Positives = 97/125 (77%), Gaps = 5/125 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + +++K+++RV FPLELRLF+ +DDAV+PDR+Y L
Sbjct: 259 EKRMKIKRLPNVLALHLKRFKYQEDVGKYIKLAYRVAFPLELRLFNTADDAVDPDRLYEL 318
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G+GP GHY++IVKS++ WL+FDDD V+KI +S I ++G +S Y
Sbjct: 319 FAIVIHIGNGPYHGHYVAIVKSNESWLVFDDDSVEKIKESDISKYYG-----DSNSGAAY 373
Query: 446 ILFYQ 450
+LFYQ
Sbjct: 374 VLFYQ 378
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 92/144 (63%), Gaps = 14/144 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFL +L+N I E + E N +S S+ G++ ++ VH
Sbjct: 137 FRSSMHQDAHEFLIYLLNKIAEDLEEE--ARNVRSGSSS-----GEDRKTNSSTNSNIVH 189
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 190 DLFEGVLTSETRCLTCETVSSRDEAFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 249
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PN+ AL
Sbjct: 250 DSCCGLQEAEKRMKIKRLPNVLAL 273
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 22/124 (17%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN------------------ 264
+++FGL NFGNTCY NSV QALYFC PFR+ +++ A +K N
Sbjct: 37 DKHFGLENFGNTCYVNSVFQALYFCHPFRELIIQ--AHDKSNPPVTNSNGSAPLTGPPIP 94
Query: 265 --KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
T+ S L LF +I+++ G +AP+ F+ +L+KE + F + M QDAHEFL +L+N
Sbjct: 95 IAPPTMFSALRALFVHISSNSLDKGVVAPRAFVEKLKKENELFRSSMHQDAHEFLIYLLN 154
Query: 323 HINE 326
I E
Sbjct: 155 KIAE 158
>gi|328858578|gb|EGG07690.1| ubiquitin carboxyl-terminal hydrolase 12 [Melampsora
larici-populina 98AG31]
Length = 1076
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 99/128 (77%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY +++ R++K+++RVVFP ELRLF+ +DD NPDR+Y L
Sbjct: 443 EKRMKIKKLPNVLALHLKRFKYQEELQRYIKLTYRVVFPFELRLFNTTDDIPNPDRLYEL 502
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+KS WLLFDD+VV I+++ I+ ++G T +GY
Sbjct: 503 WAIVVHIGTGPHHGHYVTILKSSGRWLLFDDNVVTLIEENEIQKYYGDT----PGVGSGY 558
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 559 VLFYQAVD 566
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/150 (48%), Positives = 94/150 (62%), Gaps = 20/150 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE----RPQSNAKSKLSAPDGGGGDNHSSSGFEEP 129
F + M QDAHEFLN+L+N + E ++ E R + L P +S F EP
Sbjct: 315 FRSTMHQDAHEFLNYLVNSVAEDVMVEQERLRKAEDNSPYLEPPP-------TSFKFAEP 367
Query: 130 --TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
TWVH++F+G+LT+ETKCL CETV+ +DE F DL +DI+QNTS+T CLR FS++E LC
Sbjct: 368 GRTWVHQLFEGVLTNETKCLTCETVTQRDESFLDLSIDIEQNTSLTACLRQFSASEMLCQ 427
Query: 188 DNKFKCDNCASYQEAQG-------PNISAL 210
NKF CD C S QEA+ PN+ AL
Sbjct: 428 KNKFSCDQCCSLQEAEKRMKIKKLPNVLAL 457
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
T+ S L DLFH+I+ K +G++AP+ FIT L++ + F + M QDAHEFLN+L+N + E
Sbjct: 277 TISSTLRDLFHHISHQPKPIGAVAPQAFITTLKRYNELFRSTMHQDAHEFLNYLVNSVAE 336
Query: 327 KCM 329
M
Sbjct: 337 DVM 339
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/37 (78%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
ERYFG+ NFGNTCY+NSVLQALYFCKPFR+ +LE A
Sbjct: 41 ERYFGMENFGNTCYANSVLQALYFCKPFRE-LLELSA 76
>gi|351727152|ref|NP_001236383.1| uncharacterized protein LOC100305765 [Glycine max]
gi|255626553|gb|ACU13621.1| unknown [Glycine max]
Length = 155
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 61/144 (42%), Gaps = 32/144 (22%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
I+ E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAP 113
+N + +++ E + + S P
Sbjct: 121 LNELVDILEKEAQAAKNDQETSPP 144
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 GGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 102/131 (77%), Gaps = 3/131 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY+++++R+ K+S+RVVFPLEL+L + +D+ D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKLSNTVEDS---DIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 356
Query: 446 ILFYQSRDSTD 456
ILFY+S +++
Sbjct: 357 ILFYESLGASN 367
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 135/242 (55%), Gaps = 42/242 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 GGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKS---KLSAPDG--GGGDNHSSSGF-EEP--TWVHEIFQGILT 141
+N + +++ E+ AKS S+P+ G N ++G +EP TWVH+ FQGILT
Sbjct: 121 LNELVDIL--EKEAQAAKSDPETSSSPEKIPNGPKNGQANGVSKEPLVTWVHKNFQGILT 178
Query: 142 SETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQE 201
+ET+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QE
Sbjct: 179 NETRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQE 238
Query: 202 AQ 203
AQ
Sbjct: 239 AQ 240
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 99/126 (78%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKY++++ R+ K+S+RVVFPLEL+L + +DDA + Y+L
Sbjct: 241 QKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSL 300
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG T ++ +++ GY
Sbjct: 301 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGY 360
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 361 ILFYES 366
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 132/255 (51%), Gaps = 46/255 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G + S LEK G D+FP ERYFGL N G TC
Sbjct: 2 GASGSKLEKAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKP 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 VAEAEENLLTCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT-------WVHEIFQGILTS 142
+N + +++ E + + S G N S SG T WVH+IFQGILT+
Sbjct: 121 LNELVDILEREAKAAKSNSGCETSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CET++++DE F DL +DI+QN+SIT CLR FSSTETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q-------GPNISAL 210
Q P I AL
Sbjct: 241 QKRMKIKSAPRILAL 255
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK- 262
G + S LEK G D+FP ERYFGL NFGNTCY NSVLQALYFC PFRD++LE+ ++K
Sbjct: 2 GASGSKLEKAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKP 60
Query: 263 --KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ +E LL+CL++LF I + KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 61 VAEAEENLLTCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
>gi|323507928|emb|CBQ67799.1| related to deubiquitinating enzyme ubh1 [Sporisorium reilianum
SRZ2]
Length = 1080
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R+VK+++RVVFPLELRLF+ SDDA +PDR+Y L
Sbjct: 502 EKRMKIKKLPNVLALHLKRFKYEETVQRYVKLAYRVVFPLELRLFNTSDDAEDPDRLYEL 561
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYI++VK + W+ FDDDVV +D++ + ++G + + Y
Sbjct: 562 CAIVVHIGAGPHHGHYIAVVKVGNRWIQFDDDVVTYVDEAELTKYYG----DRPGLGSAY 617
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 618 VLFYQAVD 625
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/157 (42%), Positives = 94/157 (59%), Gaps = 20/157 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINE-VILSERPQSNAKSKLSAP------------DGGGGDN 120
FD+ M QDAHE LNF++N + E +I +++ ++ K + P D N
Sbjct: 360 FDSTMHQDAHEMLNFVLNKVGEDLIDADKAKTRVKMQSRNPYLNMRTDSDKTVDAQRKRN 419
Query: 121 HSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
G T VH +F+G+LT+ET+CL CETV+S+DE F DL +DI +N+S+T CLR FS
Sbjct: 420 VMEVGPNGKTCVHRLFEGVLTNETRCLTCETVTSRDECFLDLSIDIDKNSSVTSCLRQFS 479
Query: 181 STETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
++E L S NKF CD+C+ QEA+ PN+ AL
Sbjct: 480 ASEMLRSRNKFFCDSCSGLQEAEKRMKIKKLPNVLAL 516
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET 267
G+ NFGNTCY NSVLQ+LYFC+PFRD VL YK+ ++ ++
Sbjct: 136 LGMENFGNTCYVNSVLQSLYFCRPFRDSVLSYKSSGRERSQS 177
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
LS +A+ V S A K F+ L++E FD+ M QDAHE LNF++N + E
Sbjct: 324 LSISTSSVGTLASGFPSVDSTAVKAFLATLKRENVLFDSTMHQDAHEMLNFVLNKVGEDL 383
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ DK VK+ R + L + SD V+ R N++ V
Sbjct: 384 IDA-----------------DKAKTRVKMQSRNPY---LNMRTDSDKTVDAQRKRNVMEV 423
Query: 389 VIHCGSGPN 397
GPN
Sbjct: 424 ------GPN 426
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 70/126 (55%), Positives = 99/126 (78%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKY++++ R+ K+S+RVVFPLEL+L + +DDA + Y+L
Sbjct: 243 QKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEAEYSL 302
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG T ++ +++ GY
Sbjct: 303 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDHGY 362
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 363 ILFYES 368
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 133/255 (52%), Gaps = 46/255 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G + S LEK +G D+FP ERYFGL N G TC
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKP 62
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 VAEAEENLLTCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT-------WVHEIFQGILTS 142
+N + +++ E + + S G N S SG T WVH+IFQGILT+
Sbjct: 123 LNELVDILEREAKAAKSNSGCETSPGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGILTN 182
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CET++++DE F DL +DI+QN+SIT CLR FSSTETL +++KF CD C S QEA
Sbjct: 183 ETRCLRCETITARDETFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 242
Query: 203 Q-------GPNISAL 210
Q P I AL
Sbjct: 243 QKRMKIKSAPRILAL 257
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK- 262
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFRD++LE+ ++K
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKP 62
Query: 263 --KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ +E LL+CL++LF I + KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 63 VAEAEENLLTCLSELFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 321 INHI 324
+N +
Sbjct: 123 LNEL 126
>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
Length = 364
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 100/132 (75%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKYM+++ R+ K+S+RVVFPLEL+L + ++DA + Y+L
Sbjct: 232 QKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLELKLCNTAEDAPGSESEYSL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG T ++ +++ GY
Sbjct: 292 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESYVQTFFGSTQEYSNNTDHGY 351
Query: 446 ILFYQSRDSTDA 457
ILFY+ D A
Sbjct: 352 ILFYECLDPAKA 363
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 36/235 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKT 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ + F +YM QDAHEFLNFL
Sbjct: 61 VGEAEENLLTCLADLFTQINSQKKKTGVIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTSETKCLN 148
+N + E + E+ + + ++P+ DN ++G E P TWVH+IFQG LT+ET+CL
Sbjct: 121 LNQLVEAL--EKEAKSDPTAPASPEKKSSDN-GATGEEHPLTWVHKIFQGCLTNETRCLR 177
Query: 149 CETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CET+++KDE F DL +DI+QN+S+T CLR FSSTETL +D+KF CD C S QEAQ
Sbjct: 178 CETITAKDEKFLDLSLDIEQNSSVTSCLRNFSSTETLIADDKFFCDKCCSLQEAQ 232
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK- 262
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFRD++L+Y + K
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKT 60
Query: 263 --KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ +E LL+CLADLF I + KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 61 VGEAEENLLTCLADLFTQINSQKKKTGVIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFL 120
Query: 321 INHINEKCMKVKK 333
+N + E K K
Sbjct: 121 LNQLVEALEKEAK 133
>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
Length = 364
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/132 (53%), Positives = 100/132 (75%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKYM+++ R+ K+S+RVVFPLEL+L + ++DA + Y+L
Sbjct: 232 QKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLELKLCNTAEDAPGSESEYSL 291
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG T ++ +++ GY
Sbjct: 292 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESYVQTFFGSTQEYSNNTDHGY 351
Query: 446 ILFYQSRDSTDA 457
ILFY+ D A
Sbjct: 352 ILFYECLDPAKA 363
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/235 (40%), Positives = 131/235 (55%), Gaps = 36/235 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKT 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ + F +YM QDAHEFLNFL
Sbjct: 61 VGEAEENLLTCLADLFTQINSQKKKTGVIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTSETKCLN 148
+N + E + E+ + + ++P+ DN ++G E P TWVH+IFQG LT+ET+CL
Sbjct: 121 LNQLVETL--EKEAKSDPTAPASPEKKSSDN-GATGEEHPLTWVHKIFQGCLTNETRCLR 177
Query: 149 CETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CET+++KDE F DL +DI+QN+S+T CLR FSSTETL +D+KF CD C S QEAQ
Sbjct: 178 CETITAKDEKFLDLSLDIEQNSSVTSCLRNFSSTETLIADDKFFCDKCCSLQEAQ 232
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/133 (57%), Positives = 96/133 (72%), Gaps = 4/133 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK- 262
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFRD++L+Y + K
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKT 60
Query: 263 --KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ +E LL+CLADLF I + KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 61 VGEAEENLLTCLADLFTQINSQKKKTGVIAPKRFVQRVKKQHELFRSYMHQDAHEFLNFL 120
Query: 321 INHINEKCMKVKK 333
+N + E K K
Sbjct: 121 LNQLVETLEKEAK 133
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 IADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L SD A N D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL---SDTAENSDIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 356
Query: 446 ILFYQSRDS 454
ILFY+S S
Sbjct: 357 ILFYESIGS 365
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/241 (42%), Positives = 132/241 (54%), Gaps = 40/241 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
I+ E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 IADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-----EEP--TWVHEIFQGILTS 142
+N + + IL + QS + ++P N +G +EP TWVH+ FQGILT+
Sbjct: 121 LNELVD-ILEKEAQSAKNDQETSPPSEKAANGPKNGLANGAKKEPLVTWVHKNFQGILTN 179
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEA
Sbjct: 180 ETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 239
Query: 203 Q 203
Q
Sbjct: 240 Q 240
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFRD++LEY A NK
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKN 60
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E +L+CLADLF I++ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 TGDVEENMLTCLADLFSQISSQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + D N D Y+L
Sbjct: 239 QKRMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLELKLLNTVD---NSDLEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHYIS+VKSH+ WL FDD+ V+ D+S ++ FFG + +++ GY
Sbjct: 296 FAVVVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGY 355
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 356 ILFYES 361
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/239 (38%), Positives = 126/239 (52%), Gaps = 37/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G ++FP ERYFGL N G TC
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKN 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 TGDVEENMLTCLADLFSQISSQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSER---PQSNAKSKLSAPDGGGGDNHSSSGFEE--PTWVHEIFQGILTSET 144
+N + +++ E +S L G D + +E TWVH+ FQGILT+ET
Sbjct: 121 LNELVDILEKEHNAARESLQNLSLQKNSNGPIDGQPNGSHKELAVTWVHKCFQGILTNET 180
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+CL CETV+ +DE FFDL +DI+QN+S+T CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 RCLRCETVTDRDETFFDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
>gi|302795107|ref|XP_002979317.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
gi|302813882|ref|XP_002988626.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300143733|gb|EFJ10422.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300153085|gb|EFJ19725.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
Length = 369
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 101/143 (70%), Gaps = 4/143 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFRD++LEY ++ K
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSRTKS 60
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ +E LL+CLADLF I + KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 61 SGEPEENLLTCLADLFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHINEKCMKVKKLPMILALHLK 343
+N + E K K + +LK
Sbjct: 121 LNELVETLEKEAKSGRTASGNLK 143
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 99/129 (76%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K P ILALHLKRFKY++++ R+ K+S+RVVFPLEL+L + +DDA + Y+L
Sbjct: 238 QKRMKIKTPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSESEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH WL FDD+ V+ ID++ ++ FFG T ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHSHWLFFDDENVEIIDETYVQTFFGSTQEYSNNTDHGY 357
Query: 446 ILFYQSRDS 454
ILFY+ D+
Sbjct: 358 ILFYECLDA 366
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 128/238 (53%), Gaps = 36/238 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSRTKS 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+ +E+ + + Q + Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 SGEPEENLLTCLADLFSQINSQKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKS---KLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTSETK 145
+N + E + E S K + G N +++ + P TWVH+IFQG LT+ET+
Sbjct: 121 LNELVETLEKEAKSGRTASGNLKPAEKKENGVANGTAADQDHPLTWVHKIFQGFLTNETR 180
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CL CET++++DE F DL +DI+QN+SIT CLR FSSTETL +++KF CD C S QEAQ
Sbjct: 181 CLRCETITARDEKFLDLSLDIEQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEAQ 238
>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY AKNK
Sbjct: 2 GATGSKLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYAKNKN 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ R+RK+ + F +YM QDAHEFLN+L
Sbjct: 61 LGDPEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNYL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 95/126 (75%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ RH K+S+RVVFPLEL+L + +D D Y L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYMEQLGRHKKLSYRVVFPLELKLANSMEDV---DSEYTL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 356
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 357 ILFYES 362
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 130/240 (54%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G ++FP ERYFGL N G TC
Sbjct: 2 GATGSKLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYAKNKN 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLN+L
Sbjct: 61 LGDPEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRVRKQNELFRSYMHQDAHEFLNYL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPDG---GGGDNHSSSGFE-EP--TWVHEIFQGILTSE 143
+N + +++ E + S P G G N ++G + EP TWVH+ FQG+LT+E
Sbjct: 121 LNELVDILEKESHVAKTLPDESLPSGQTANGPRNAPTNGVQREPLVTWVHKNFQGLLTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 ILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDA---DIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 356
Query: 446 ILFYQSRDS 454
ILFY+S S
Sbjct: 357 ILFYESIGS 365
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 129/240 (53%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
I G E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 ILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPD----GGGGDNHSSSGFEEP--TWVHEIFQGILTSE 143
+N + +++ E + + S P G + ++ +EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLQCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 ILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDA---DIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 356
Query: 446 ILFYQSRDS 454
ILFY+S S
Sbjct: 357 ILFYESLGS 365
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 129/240 (53%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
I G E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 ILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPD----GGGGDNHSSSGFEEP--TWVHEIFQGILTSE 143
+N + +++ E + + S P G + ++ +EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLQCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LE+ A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 264 N-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ +E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 323 HINE 326
+ E
Sbjct: 121 ELVE 124
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + D+ V D Y+L
Sbjct: 238 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV--DIEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++ GY
Sbjct: 296 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGY 355
Query: 446 ILFYQS 451
IL Y+S
Sbjct: 356 ILLYES 361
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 129/245 (52%), Gaps = 50/245 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFG N G TC
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 32 KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 92 HINEVILSERPQSNAKSK-----------LSAPDGGGGDNHSSSGFEEP--TWVHEIFQG 138
+ E++ E + A ++ L AP G +EP TWVH+IFQG
Sbjct: 121 ELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVH-------KEPIVTWVHKIFQG 173
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
ILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S
Sbjct: 174 ILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCS 233
Query: 199 YQEAQ 203
QEAQ
Sbjct: 234 LQEAQ 238
>gi|392570543|gb|EIW63715.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 923
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 96/128 (75%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + +++K+++RV FPLELRLF+ DDA +PDR+Y L
Sbjct: 311 EKRMKIKKLPNVLALHLKRFKYQEDVGKYIKLAYRVAFPLELRLFNTVDDAEDPDRLYEL 370
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+K+ W+LFDDD V I +S I +FG + +S + Y
Sbjct: 371 YAIVVHIGTGPHHGHYVTIIKARGTWMLFDDDTVSTIKESDIPKYFG-----ESNSGSAY 425
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 426 VLYYQAVD 433
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 91/158 (57%), Gaps = 21/158 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP---- 129
F M QDAHEFLNFL+N I E + ER + + + P G N + P
Sbjct: 168 FRGSMHQDAHEFLNFLLNKIMEEMEDERRRLGSGTNGVGPSGEDLSNSVGTLSTNPPAST 227
Query: 130 ----------TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
T VH +F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR F
Sbjct: 228 STALGTSYHSTIVHRLFEGVLTSETRCLTCETVSSRDESFIDLSIDIEQNSSVTACLRQF 287
Query: 180 SSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
S++E LC NKF CD+C QEA+ PN+ AL
Sbjct: 288 SASEMLCQKNKFFCDSCCDLQEAEKRMKIKKLPNVLAL 325
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 74/154 (48%), Gaps = 52/154 (33%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK--------------------------- 258
FGL NFGNTCY+NSVLQ+LYFC PFR+ +L+Y
Sbjct: 37 FGLENFGNTCYANSVLQSLYFCGPFRELLLQYPDPSVPDVPLQPPSPPSPAHPPPPPPVT 96
Query: 259 -AKNKKNK------------------------ETLLSCLADLFHNIATHKKKVGSIAPKK 293
+N + K TLLS L L+ +I+ + G+++P+
Sbjct: 97 SPQNSRKKGARGMSVSEPAPNLPPAFTIPPSPPTLLSALRSLYLHISRNPVDKGTVSPRV 156
Query: 294 FITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
FI ++++ + F M QDAHEFLNFL+N I E+
Sbjct: 157 FIDKIKELNELFRGSMHQDAHEFLNFLLNKIMEE 190
>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
Length = 366
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFRD++LEY A NK
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKN 60
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E +L+CLADLF I+ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 TGDVEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + D N D Y+L
Sbjct: 239 QKRMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLELKLLNTVD---NSDLEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHYIS+VKSH+ WL FDD+ V+ D+S ++ FFG + +++ GY
Sbjct: 296 FAVVVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGY 355
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 356 ILFYES 361
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 126/239 (52%), Gaps = 37/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G ++FP ERYFGL N G TC
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKN 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 TGDVEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSE-----RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSET 144
+N + +++ E P N + ++ G + S TWVH+ FQGILT+ET
Sbjct: 121 LNELVDILEKEHNAAREPLQNLPFQKNSNGTIDGQPNGSHKELAATWVHKCFQGILTNET 180
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+CL CETV+ +DE FFDL +DI+QN+S+T CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 RCLRCETVTDRDETFFDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 98/138 (71%), Gaps = 7/138 (5%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E +L+CLADLF I+ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 ASDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INH---INEKCMKVKKLP 335
+N I EK K K P
Sbjct: 121 LNELVDILEKECKANKEP 138
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+++RVVFPLEL+L + D N D Y+L
Sbjct: 239 QKRMKIKKQPNILVIHLKRFKYIEQLGRYKKLTYRVVFPLELKLMNTVD---NSDLEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AV++H GSGPN GHYIS+VKSH+ WL FDD+ V+ D+S ++ FFG + +++ GY
Sbjct: 296 FAVLVHVGSGPNHGHYISVVKSHNHWLFFDDETVEMTDESMVQTFFGSAQEFSGNTDNGY 355
Query: 446 ILFYQSRDST 455
ILFY+S T
Sbjct: 356 ILFYESLAKT 365
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 128/239 (53%), Gaps = 37/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G ++FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
S G E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 ASDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSE-----RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSET 144
+N + +++ E P N+ S ++ G + S + TWVH+ FQGILT++T
Sbjct: 121 LNELVDILEKECKANKEPSQNSSSNKNSNGPVNGQPNGSHKEPDTTWVHKCFQGILTNQT 180
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KCL CETV+ +DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 KCLRCETVTDRDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LE+ A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 264 N-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ +E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 323 HINE 326
+ E
Sbjct: 121 ELVE 124
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + D+ V D Y+L
Sbjct: 238 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV--DIEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++ GY
Sbjct: 296 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEKSAVQTFFGSSQEYSSNTDHGY 355
Query: 446 ILFYQS 451
IL Y+S
Sbjct: 356 ILLYES 361
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 129/245 (52%), Gaps = 50/245 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFG N G TC
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 32 KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 92 HINEVILSERPQSNAKSK-----------LSAPDGGGGDNHSSSGFEEP--TWVHEIFQG 138
+ E++ E + A ++ L AP G +EP TWVH+IF+G
Sbjct: 121 ELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVH-------KEPIVTWVHKIFKG 173
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
ILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S
Sbjct: 174 ILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCS 233
Query: 199 YQEAQ 203
QEAQ
Sbjct: 234 LQEAQ 238
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A +K
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKN 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDA---DIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 356
Query: 446 ILFYQSRDSTDART 459
ILFY+S +++ ++
Sbjct: 357 ILFYESIGASNNKS 370
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 133/240 (55%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKN 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
I E L DL + ++ F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAP--DGGGGDNHSSSG--FEEP--TWVHEIFQGILTSE 143
+N + +++ E ++++ S+P G H+ + +EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEAQAVKSETETSSPPEKTANGPKHAQANGVSKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKN 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 LADAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDA---DSEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S+++ FFG ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESSVQTFFGSAQEYSSNTDHGY 356
Query: 446 ILFYQSRDSTD 456
ILFY+S + D
Sbjct: 357 ILFYESLATND 367
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 131/240 (54%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ--------TS 49
G S LEK +G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKN 60
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
L D C L + + S + F +YM QDAHEFLNFL
Sbjct: 61 LADAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAP---DGGGGDNHSSSGFE-EP--TWVHEIFQGILTSE 143
+N + +++ E S + + S+P G ++G + EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEASASKSDPETSSPPEKTANGPKTAQANGVQKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|71003714|ref|XP_756523.1| hypothetical protein UM00376.1 [Ustilago maydis 521]
gi|46095961|gb|EAK81194.1| hypothetical protein UM00376.1 [Ustilago maydis 521]
Length = 1066
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 96/128 (75%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R+VK+++RVVFPLELRLF+ SDDA +PDR+Y L
Sbjct: 507 EKRMKIKKLPNVLALHLKRFKYEETVQRYVKLAYRVVFPLELRLFNTSDDAEDPDRLYEL 566
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++++K W+ FDDDVV ID++ + ++G + + Y
Sbjct: 567 CAIVVHIGAGPHHGHYVAVIKVGGRWVQFDDDVVTYIDEAELTKYYG----DRPGLGSAY 622
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 623 VLFYQAVD 630
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 98/160 (61%), Gaps = 23/160 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINE-VILSERPQSNAKSKL--SAPDGGGGDNHSSSGFE--- 127
FD+ M QDAHE LNF++N + E +I +++ +S KS+ + P+ N S +
Sbjct: 362 FDSTMHQDAHEMLNFVLNKVGEDLIDADKAKSRVKSQSRDAYPNSRNMRNGSDKTVDVQR 421
Query: 128 -------EP---TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLR 177
P T VH +F+G+LT+ET+CL CETV+S+DE F DL +DI +N+S+T CLR
Sbjct: 422 KRNVMEVAPNGKTCVHRLFEGVLTNETRCLTCETVTSRDECFLDLSIDIDKNSSVTSCLR 481
Query: 178 GFSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
FS++E L S NKF CD+C+ QEA+ PN+ AL
Sbjct: 482 QFSASEMLRSRNKFFCDSCSGLQEAEKRMKIKKLPNVLAL 521
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA 280
G+ NFGNTCY NSV+Q+LYFC+PFRD VL YK + + LS + H++
Sbjct: 139 LGMENFGNTCYVNSVIQSLYFCRPFRDSVLSYKPSGRDRSGSDLSSTGGV-HSVG 192
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
LS +A+ V S A K F+T L++E FD+ M QDAHE LNF++N + E
Sbjct: 326 LSISTSSAGTLASGFPSVDSGAVKSFLTTLKRENVLFDSTMHQDAHEMLNFVLNKVGEDL 385
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ DK VK R +P + + SD V+ R N++ V
Sbjct: 386 IDA-----------------DKAKSRVKSQSRDAYPNSRNMRNGSDKTVDVQRKRNVMEV 428
Query: 389 V 389
Sbjct: 429 A 429
>gi|297742872|emb|CBI35637.3| unnamed protein product [Vitis vinifera]
Length = 331
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKN 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 LADAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 131/240 (54%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ--------TS 49
G S LEK +G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKN 60
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
L D C L + + S + F +YM QDAHEFLNFL
Sbjct: 61 LADAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAP---DGGGGDNHSSSGFE-EP--TWVHEIFQGILTSE 143
+N + +++ E S + + S+P G ++G + EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEASASKSDPETSSPPEKTANGPKTAQANGVQKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 41/131 (31%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQL---------------------------------- 265
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S+++ FFG ++ +++ GY
Sbjct: 266 -------GSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESSVQTFFGSAQEYSSNTDHGY 318
Query: 446 ILFYQSRDSTD 456
ILFY+S + D
Sbjct: 319 ILFYESLATND 329
>gi|388499138|gb|AFK37635.1| unknown [Lotus japonicus]
Length = 202
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 IGDPEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 41/202 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 IGDPEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPD----GGGGDNHSSSGFEEP--TWVHEIFQGIL--T 141
+N + +++ E + S P G + H + G +EP TWVH+ FQ T
Sbjct: 121 LNELVDILEKEAQAAKTDPDTSPPSEKVANGFKNGHVNGGQKEPLVTWVHKNFQREYSPT 180
Query: 142 SETKCLNCETVSSKDEDFFDLQ 163
+ C N ET +++DE FF L+
Sbjct: 181 RQDAC-NSETATARDETFFRLE 201
>gi|357163877|ref|XP_003579876.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Brachypodium distachyon]
Length = 368
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 94/126 (74%), Gaps = 4/126 (3%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A N
Sbjct: 2 VMGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLLEYYANN 60
Query: 262 KK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
K +E LL+CLADLF ++ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLN
Sbjct: 61 KSPGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLN 120
Query: 319 FLINHI 324
FL+N +
Sbjct: 121 FLLNEL 126
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 97/125 (77%), Gaps = 3/125 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL++ SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKISSTSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ST++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGY 357
Query: 446 ILFYQ 450
ILFY+
Sbjct: 358 ILFYE 362
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 131/241 (54%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ--------TS 49
G + S LEK +G D+FP ERYFGL N G TC + PF EQ S
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLLEYYANNKS 62
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
D C L + + S + F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K+ P+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEKV--PNGPVQPLANGVKKEPPITLVHKNFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE FFDL VDI+QN+SIT CL+ FSSTETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|326511435|dbj|BAJ87731.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 275
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 98/138 (71%), Gaps = 7/138 (5%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E +L+CLADLF I+ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 ASDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INH---INEKCMKVKKLP 335
+N I EK K K P
Sbjct: 121 LNELVDILEKECKANKEP 138
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 124/235 (52%), Gaps = 37/235 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G ++FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
S G E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 ASDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSE-----RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSET 144
+N + +++ E P N+ S ++ G + S + TWVH+ FQGILT++T
Sbjct: 121 LNELVDILEKECKANKEPSQNSSSNKNSNGPVNGQPNGSHKEPDTTWVHKCFQGILTNQT 180
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASY 199
KCL CETV+ +DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C Y
Sbjct: 181 KCLRCETVTDRDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCRY 235
>gi|384497193|gb|EIE87684.1| hypothetical protein RO3G_12395 [Rhizopus delemar RA 99-880]
Length = 551
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 101/136 (74%), Gaps = 5/136 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP ILALHLKRFKY +++ +++K+++RVVFP ELRLF+ SDD + DRMY L
Sbjct: 340 EKRMKIKKLPNILALHLKRFKYQEQLQKYIKLTYRVVFPFELRLFNTSDDTEDADRMYEL 399
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
++VIH GSGP+ GHY++IVKS+ W+LFDDDVV +I + I+ +F S +GY
Sbjct: 400 WSIVIHIGSGPHHGHYVAIVKSNGQWMLFDDDVVTQIQEEDIQKYFS----DLPGSGSGY 455
Query: 446 ILFYQSRDSTDARTMN 461
+LFYQ+ D D T+N
Sbjct: 456 VLFYQAID-LDMNTIN 470
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 98/149 (65%), Gaps = 12/149 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKS----KLSAPDGGGGDNHSSS-GFEE 128
F + M QDAHEFLN+++N I + + + + + A+S K S+ + +SS +
Sbjct: 206 FRSSMHQDAHEFLNYVLNTIADDVQNYQQKRYAESDDSKKGSSINSDSNQTDTSSCNNPK 265
Query: 129 PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
TWVH++F+G+ ++ETKCL+CETV+S+DE F DL +D++ N+SIT CLR FS++ETLC
Sbjct: 266 STWVHQLFEGVFSNETKCLSCETVTSRDECFMDLSIDVEMNSSITSCLRQFSASETLCHK 325
Query: 189 NKFKCDNCASYQEAQG-------PNISAL 210
NK+ CD C+ QEA+ PNI AL
Sbjct: 326 NKYYCDICSGLQEAEKRMKIKKLPNILAL 354
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
++TL S L DLF I+THKKK G IAP FI +++KE + F + M QDAHEFLN+++N I
Sbjct: 166 EDTLFSSLKDLFWKISTHKKKSGVIAPINFINKVKKENELFRSSMHQDAHEFLNYVLNTI 225
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 31/35 (88%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
ERYFGL NFGNTCYSNSV+QALYFCKPFR VL Y
Sbjct: 30 ERYFGLENFGNTCYSNSVVQALYFCKPFRHCVLNY 64
>gi|358058415|dbj|GAA95799.1| hypothetical protein E5Q_02456 [Mixia osmundae IAM 14324]
Length = 774
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 95/128 (74%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP +LALHLKRFKY + + RHVK+ +RVVFPLELRLF+ +DDA + DR+Y L
Sbjct: 394 EKRMKVKELPNVLALHLKRFKYQENLGRHVKLGYRVVFPLELRLFNTADDAKDADRLYEL 453
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G GP+ GHY++++++ WLLFDDD V ++++ I+ FFG +S Y
Sbjct: 454 FAIVVHIGIGPHHGHYVTVLRTGSRWLLFDDDSVTLVNEAEIQTFFG----GGTASGGAY 509
Query: 446 ILFYQSRD 453
+LFYQ+ +
Sbjct: 510 VLFYQAAE 517
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 94/144 (65%), Gaps = 20/144 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLN+LIN ++E + ER + + PDG + S T++H
Sbjct: 278 FRSTMHQDAHEFLNYLINTVSEDV-EERAKG-----FTRPDGELANRSS-------TFIH 324
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F G+LT+ET+CL CETV+S+DE F DL +DI+QN+SI+ CLR FS++E LCS NKF C
Sbjct: 325 SLFAGLLTNETRCLTCETVTSRDEAFLDLSIDIEQNSSISACLRQFSASEMLCSRNKFSC 384
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C S QEA+ PN+ AL
Sbjct: 385 DHCGSLQEAEKRMKVKELPNVLAL 408
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 45/60 (75%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L DLF I++ K +G++AP+ FIT+L++E + F + M QDAHEFLN+LIN ++E
Sbjct: 240 TLYTALRDLFVAISSQPKALGTVAPQAFITQLKRENELFRSTMHQDAHEFLNYLINTVSE 299
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 6/60 (10%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRD------RVLEYKAKNKKNKETLLSCLADL 275
E YFG+ NFGNTCY+NSVLQALYFCKPFR+ R+ +Y+ + K+ + L+ + L
Sbjct: 32 GETYFGMENFGNTCYANSVLQALYFCKPFRELLIQFARLEQYQVQLKQRPQETLNVTSQL 91
>gi|395335131|gb|EJF67507.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 909
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 94/128 (73%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + +++K+++RV FPLELRLF+ DDA +PDR+Y L
Sbjct: 258 EKRMKIKKLPNVLALHLKRFKYQEDLGKYIKLAYRVAFPLELRLFNTVDDAEDPDRLYEL 317
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+K+ W LFDDD V + +S I +FG +S T Y
Sbjct: 318 FAIVVHIGNGPHHGHYVTIIKARGVWTLFDDDSVSTVKESDIPKYFG-----DSNSGTAY 372
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 373 VLYYQAVD 380
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 89/159 (55%), Gaps = 23/159 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHI---------------NEVILSERPQSNAKSKLSAPDGGGG 118
F QDAHEFLN+L+N I N V S S + + LS
Sbjct: 115 FRPAQHQDAHEFLNYLLNRIMEDMEDDGRKLGSNANGVEKSGEDLSTSIATLSTQPAPST 174
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
++ + T VH +F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR
Sbjct: 175 STAQATAYHS-TIVHRLFEGVLTSETRCLTCETVSSRDESFIDLSIDIEQNSSVTACLRQ 233
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
FS++E LC NKF CD+C QEA+ PN+ AL
Sbjct: 234 FSASEMLCQKNKFFCDSCCDLQEAEKRMKIKKLPNVLAL 272
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L LF +I+ + G++APK FI +L++ + F QDAHEFLN+L+N I E
Sbjct: 77 TLFSALRSLFLHISRNPADKGTVAPKAFIDKLKELNEIFRPAQHQDAHEFLNYLLNRIME 136
>gi|226496747|ref|NP_001146737.1| uncharacterized protein LOC100280339 [Zea mays]
gi|219888545|gb|ACL54647.1| unknown [Zea mays]
gi|223974199|gb|ACN31287.1| unknown [Zea mays]
gi|413918515|gb|AFW58447.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 368
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 321 INHI 324
+N +
Sbjct: 123 LNEL 126
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L + SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKLSNSSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ T++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGY 357
Query: 446 ILFYQS 451
ILFY+
Sbjct: 358 ILFYEG 363
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 133/241 (55%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K AP+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEK--APNGPVQPLANGVKKEPPVTLVHKSFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|195624860|gb|ACG34260.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 368
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 321 INHI 324
+N +
Sbjct: 123 LNEL 126
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L + SDD D Y+L
Sbjct: 241 QKRMKIKKTPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKLSNSSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ T++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGY 357
Query: 446 ILFYQS 451
ILFY+
Sbjct: 358 ILFYEG 363
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 133/241 (55%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K AP+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEK--APNGPVQPLANGVKKEPPVTLVHKSFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 8/139 (5%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKG 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E +L+CLADLF I+ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 AGDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INH----INEKCMKVKKLP 335
+N + ++C K+ P
Sbjct: 121 LNELVDILEKECNATKEPP 139
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 95/130 (73%), Gaps = 3/130 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + D N D Y+L
Sbjct: 239 QKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLINTVD---NSDLEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AV++H GSGPN GHYIS+VKSH+ WL FDD+ V+ D+S ++ FFG + +++ GY
Sbjct: 296 FAVLVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGY 355
Query: 446 ILFYQSRDST 455
ILFY+S T
Sbjct: 356 ILFYESVAKT 365
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 128/240 (53%), Gaps = 39/240 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G ++FP ERYFGL N G TC + PF EQ +
Sbjct: 2 GAAGSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKG 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
G E L DL S ++ F +YM QDAHEFLNFL
Sbjct: 61 AGDGEENMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVI------LSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSE 143
+N + +++ E PQ+++ K S G N S + TWVH+ FQGILT++
Sbjct: 121 LNELVDILEKECNATKEPPQNSSLQKNSNGPINGQPNGSHRELD-TTWVHKCFQGILTNQ 179
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+ +DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 180 TRCLRCETVTDRDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 239
>gi|242076010|ref|XP_002447941.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
gi|241939124|gb|EES12269.1| hypothetical protein SORBIDRAFT_06g018520 [Sorghum bicolor]
Length = 368
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 4/126 (3%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A N
Sbjct: 2 VMGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANN 60
Query: 262 KK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
K +E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLN
Sbjct: 61 KTPGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLN 120
Query: 319 FLINHI 324
FL+N +
Sbjct: 121 FLLNEL 126
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L + SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKLSNTSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ T++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGY 357
Query: 446 ILFYQS 451
ILFY+
Sbjct: 358 ILFYEG 363
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 134/239 (56%), Gaps = 37/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSERPQSNAKSKLSAPDGG--GGDNHSSSGFE-EP--TWVHEIFQGILTSET 144
+N + +++ E + +LS+P+ G ++G + EP T VH+ FQGILT+ET
Sbjct: 123 LNELVDILEKESSAAKDSPQLSSPEKAPNGPVQPLANGVKKEPPVTLVHKNFQGILTNET 182
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL +++KF CD C S QEAQ
Sbjct: 183 RCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEAQ 241
>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
Length = 369
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++L+Y + NK
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+ +RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDA---DSEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESVVQTFFGSAQEYSSNTDHGY 356
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 357 ILFYES 362
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 129/240 (53%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ--------TS 49
G S LEK +G D+FP ERYFGL N G TC + PF EQ S
Sbjct: 2 GATGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKS 60
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
+ D C L + S + F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAP----DGGGGDNHSSSGFEEP--TWVHEIFQGILTSE 143
+N + +++ E + ++ S+P G ++ +EP TWVH+ FQG+LT+E
Sbjct: 121 LNELVDILEKEAHAIKSDAESSSPPEKISNGPKTGQANGAQKEPLVTWVHKNFQGLLTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|414586949|tpg|DAA37520.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 239
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 63 PGDVEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 321 INHI 324
+N +
Sbjct: 123 LNEL 126
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 128/234 (54%), Gaps = 41/234 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDVEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K AP+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEK--APNGPVQPLANGVKKEPPVTLVHKNFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
ET+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL +++KF CD C
Sbjct: 181 ETRCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKC 234
>gi|242065518|ref|XP_002454048.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
gi|241933879|gb|EES07024.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
Length = 419
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LE+ G D+FP ERYFGL NFGNTCY NSVLQALY+C PFR+++LEY +KN+
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYSKNRN 104
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK G IAPK+FI +RK + F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 321 INHI 324
+N I
Sbjct: 165 LNEI 168
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 125/236 (52%), Gaps = 34/236 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT--------S 49
G +S LE+ G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYSKNRN 104
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
L+D C L + +S + F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP--TWVHEIFQGILTSETKCL 147
+N I +++ E + ++P+ +EP TWVH+ FQG LT+ET+CL
Sbjct: 165 LNEIVDILEKESSSAKDSPGTTSPEKVSNGATVDEVRKEPLVTWVHKSFQGTLTNETRCL 224
Query: 148 NCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CET+++KDE FFDL VDI+QN+S+T CL+ F STETL +D+KF CD C S QEA+
Sbjct: 225 MCETITAKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAE 280
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 102/139 (73%), Gaps = 1/139 (0%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KK+P L +HLKRFK+++++NR+ K+S+RVV+PLEL+L S DAV D Y+L
Sbjct: 280 EKRMKIKKVPQTLVIHLKRFKFIEQLNRNKKLSYRVVYPLELKLSSSSSDAV-ADCEYSL 338
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN+GHY++ +KSHD WL FDDD V+ I +ST++ F+G + ++ +++ GY
Sbjct: 339 FAVVVHLGSGPNQGHYVAKIKSHDHWLSFDDDNVEMIPESTLQTFYGSSREYSGNTDHGY 398
Query: 446 ILFYQSRDSTDARTMNSND 464
ILFY+ +S+D
Sbjct: 399 ILFYERIGGNGDEKTDSSD 417
>gi|115458702|ref|NP_001052951.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|113564522|dbj|BAF14865.1| Os04g0452400 [Oryza sativa Japonica Group]
gi|215695550|dbj|BAG90741.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 367
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/126 (59%), Positives = 94/126 (74%), Gaps = 4/126 (3%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A N
Sbjct: 2 VMGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANN 60
Query: 262 KK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
K +E LL+CLADLF ++ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLN
Sbjct: 61 KTPGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLN 120
Query: 319 FLINHI 324
FL+N +
Sbjct: 121 FLLNEL 126
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKL-STSDDV---DTEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ST++ FFG + ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGY 356
Query: 446 ILFYQS 451
ILFY+
Sbjct: 357 ILFYEG 362
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 132/241 (54%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK---------- 34
G + S LEK +G D+FP ERYFGL N G TC +EK
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKT 62
Query: 35 -----EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
E+ + + Q S K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K+ P+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESNAAKDSPQSSSPEKV--PNGPVQPLANGVRKEPPVTLVHKNFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE FFDL VDI+QN+SIT CL+ F STETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|259490298|ref|NP_001159183.1| uncharacterized protein LOC100304268 [Zea mays]
gi|195627604|gb|ACG35632.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
gi|223942511|gb|ACN25339.1| unknown [Zea mays]
gi|414586948|tpg|DAA37519.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 368
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 76/126 (60%), Positives = 94/126 (74%), Gaps = 4/126 (3%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A N
Sbjct: 2 VMGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANN 60
Query: 262 KKN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
K +E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLN
Sbjct: 61 KTPGDVEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLN 120
Query: 319 FLINHI 324
FL+N +
Sbjct: 121 FLLNEL 126
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L + SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKLSNTSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ T++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGSSHEYSGNTDHGY 357
Query: 446 ILFYQS 451
ILFY+
Sbjct: 358 ILFYEG 363
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 133/241 (55%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREQLLEYYANNKT 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDVEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K AP+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEK--APNGPVQPLANGVKKEPPVTLVHKNFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL +++KF CD C S QEA
Sbjct: 181 ETRCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|449541532|gb|EMD32515.1| hypothetical protein CERSUDRAFT_87833 [Ceriporiopsis subvermispora
B]
Length = 898
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 96/128 (75%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + +++K+++RV FPL+LRLF+ DDA +PDR+Y L
Sbjct: 325 EKRMKIKKLPNVLALHLKRFKYQEDLGKYIKLAYRVAFPLQLRLFNTVDDAEDPDRLYEL 384
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+K+ W+LFDDD V+ I +S I +FG SS + Y
Sbjct: 385 FAIVVHIGNGPHHGHYVTIIKARGIWMLFDDDNVETIKESDIPRYFG-----DSSSGSAY 439
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 440 VLYYQAVD 447
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 95/163 (58%), Gaps = 28/163 (17%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDG----------------GG 117
F M QDAHEFLNFL+N I E + +R N ++ AP G
Sbjct: 179 FRGSMHQDAHEFLNFLLNRIVEEMEDDRRHVNGQNG-KAPSGEDLSTSVGTLPSTNGAAA 237
Query: 118 GDNHSSS---GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
+HS + GF P +VH +F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T
Sbjct: 238 SGSHSGAMDQGFNSP-FVHRLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTA 296
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
CLR FS++E LC NKF CD C QEA+ PN+ AL
Sbjct: 297 CLRQFSASEMLCQKNKFFCDFCCDLQEAEKRMKIKKLPNVLAL 339
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TLLS L LF +I+ + G++AP+ FI +L++ + F M QDAHEFLNFL+N I E
Sbjct: 141 TLLSALRSLFLHISRNPADRGTVAPRAFIEKLKELNELFRGSMHQDAHEFLNFLLNRIVE 200
Query: 327 K 327
+
Sbjct: 201 E 201
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ + FG NFGNTCY+NSVLQALYFC PFR+ + +Y
Sbjct: 34 DAKQFGFENFGNTCYANSVLQALYFCGPFRELLTQY 69
>gi|21740732|emb|CAD40853.1| OSJNBa0086B14.26 [Oryza sativa Japonica Group]
gi|116310175|emb|CAH67188.1| H0815C01.9 [Oryza sativa Indica Group]
gi|125548525|gb|EAY94347.1| hypothetical protein OsI_16114 [Oryza sativa Indica Group]
gi|125590577|gb|EAZ30927.1| hypothetical protein OsJ_15007 [Oryza sativa Japonica Group]
Length = 365
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 94/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKT 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF ++ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLNFL
Sbjct: 61 PGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L SDD D Y+L
Sbjct: 239 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKL-STSDDV---DTEYSL 294
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ST++ FFG + ++ +++ GY
Sbjct: 295 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGY 354
Query: 446 ILFYQS 451
ILFY+
Sbjct: 355 ILFYEG 360
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 132/241 (54%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEK---------- 34
G + S LEK +G D+FP ERYFGL N G TC +EK
Sbjct: 2 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFREKLLEYYANNKT 60
Query: 35 -----EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
E+ + + Q S K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 PGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K+ P+G + E P T VH+ FQGILT+
Sbjct: 121 LNELVDILEKESNAAKDSPQSSSPEKV--PNGPVQPLANGVRKEPPVTLVHKNFQGILTN 178
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CETV+++DE FFDL VDI+QN+SIT CL+ F STETL +++KF CD C S QEA
Sbjct: 179 ETRCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFCSTETLNAEDKFFCDKCCSLQEA 238
Query: 203 Q 203
Q
Sbjct: 239 Q 239
>gi|392597880|gb|EIW87202.1| cysteine proteinase, partial [Coniophora puteana RWD-64-598 SS2]
Length = 275
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 96/126 (76%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY +++ +++K+++RV FP ELRLF+ DDA NPDRMY L
Sbjct: 154 EKRMKIKRLPNVLALHLKRFKYQEEVQKYIKLAYRVAFPFELRLFNTVDDAENPDRMYEL 213
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H GSGPN GHY+SI+K+ WL+FDD+ VD I ++ I +FG + ++ + Y
Sbjct: 214 FAIVVHIGSGPNHGHYVSIIKTMGIWLIFDDETVDTIKENDIHRYFG-----ESNAGSAY 268
Query: 446 ILFYQS 451
+L+YQ+
Sbjct: 269 VLYYQA 274
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 95/147 (64%), Gaps = 21/147 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F N M QDAHEFLN+L+N I E I E+ +A +G GGDN S T
Sbjct: 36 NEAFRNTMHQDAHEFLNYLLNRIVEEIEEEKKNLHA-------NGNGGDNGS-------T 81
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
++H+IF+GILTSET+CL CE VS++DE F DL +DI+ N+S+T CLR FS++E LC NK
Sbjct: 82 FIHQIFEGILTSETRCLTCEKVSARDESFLDLSIDIEANSSVTACLRQFSASEMLCQRNK 141
Query: 191 FKCDNCASYQEAQG-------PNISAL 210
F CD C YQEA+ PN+ AL
Sbjct: 142 FFCDGCCDYQEAEKRMKIKRLPNVLAL 168
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L L+ +I+ + G++AP+ FI +L++ + F N M QDAHEFLN+L+N I E
Sbjct: 1 TLFSALRSLYIHISQNAADKGTVAPRAFIDKLKELNEAFRNTMHQDAHEFLNYLLNRIVE 60
Query: 327 KCMKVKK 333
+ + KK
Sbjct: 61 EIEEEKK 67
>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
Group]
gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
sativa Japonica Group]
gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY A NK
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 264 N---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
++ +L+CLADLF I+ KKK G IAPK+FI RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 TGDVEDNMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 94/126 (74%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + D N D Y+L
Sbjct: 239 QKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLINTVD---NSDLEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AV++H GSGPN GHYIS+VKSH+ WL FDD+ V+ D+S ++ FFG + +++ GY
Sbjct: 296 FAVLVHVGSGPNHGHYISLVKSHNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGY 355
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 356 ILFYES 361
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/242 (41%), Positives = 128/242 (52%), Gaps = 43/242 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G S LEK +G ++FP ERYFGL N G TC + PF EQ
Sbjct: 2 GAASSRLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKS 60
Query: 48 ---------TSLQDKIS--------LGWECSLILELDLCSSDE-FDNYMQQDAHEFLNFL 89
T L D S G L +E F +YM QDAHEFLNFL
Sbjct: 61 TGDVEDNMLTCLADLFSQISNQKKKTGVIAPKRFIQRLKKQNEIFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSE-----RPQSNAKSKLSAPDGGGGDNHSSSGFEE---PTWVHEIFQGILT 141
+N + +++ E P N+ K + G N +G ++ PT VH+ FQGILT
Sbjct: 121 LNELVDILEKESKVVAEPCENSSLK---KNSNGPINVQLNGTKKEPVPTLVHKCFQGILT 177
Query: 142 SETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQE 201
+ET+CL CETV+ +DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QE
Sbjct: 178 NETRCLRCETVTDRDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQE 237
Query: 202 AQ 203
AQ
Sbjct: 238 AQ 239
>gi|326504080|dbj|BAK02826.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 370
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 74/126 (58%), Positives = 93/126 (73%), Gaps = 4/126 (3%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G + S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY N
Sbjct: 2 VMGASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLLEYYTNN 60
Query: 262 KK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
K +E LL+CLADLF ++ KKK G IAPK+F+ R++K+ + F +YM QDAHEFLN
Sbjct: 61 KNPGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLN 120
Query: 319 FLINHI 324
FL+N +
Sbjct: 121 FLLNEL 126
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL++ SDD D Y+L
Sbjct: 241 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKMGSTSDDV---DTEYSL 297
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ST++ FFG + ++ +++ GY
Sbjct: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEESTLQTFFGSSHEYSGNTDHGY 357
Query: 446 ILFYQS 451
ILFY+
Sbjct: 358 ILFYEG 363
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 135/241 (56%), Gaps = 41/241 (17%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G + S LEK +G D+FP ERYFGL N G TC + PF EQ
Sbjct: 4 GASGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCTPFREQLLEYYTNNKN 62
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D ++S + + ++ ++ F +YM QDAHEFLNFL
Sbjct: 63 PGDAEENLLTCLADLFMQVSQSKKKTGVIAPKRFVQRVKKQNELFRSYMHQDAHEFLNFL 122
Query: 90 INHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTS 142
+N + +++ E PQS++ K+ P+G + E P T VH+ FQGILT+
Sbjct: 123 LNELVDILEKESSAAKDSPQSSSPEKV--PNGPVQPLANGVKKEPPVTLVHKNFQGILTN 180
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ETKCL CETV+++DE FFDL VDI+QN+SIT CL+ FSSTETL +++KF CD C S QEA
Sbjct: 181 ETKCLRCETVTARDETFFDLSVDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 203 Q 203
Q
Sbjct: 241 Q 241
>gi|340385691|ref|XP_003391342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like, partial
[Amphimedon queenslandica]
Length = 214
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/94 (69%), Positives = 84/94 (89%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +++KKLP ILALHLKRFK+M++++RH K+SHRVVFP EL+LF+ SDDA +PDRMY+L+
Sbjct: 121 KRLRIKKLPTILALHLKRFKFMEQLHRHTKLSHRVVFPWELKLFNTSDDASDPDRMYDLI 180
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVD 420
VVIHCG+GPNRGHYIS++KSH +WLL DDD V+
Sbjct: 181 GVVIHCGTGPNRGHYISVIKSHGYWLLLDDDYVE 214
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 91/144 (63%), Gaps = 27/144 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FDN QQDAHEFLN+L+N I +++ ++ P+S+ + TW+H
Sbjct: 11 FDNMQQQDAHEFLNYLLNTIADLLKAQMPESSEDTN--------------------TWIH 50
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IFQG+L +ETKCL+CETV SK EDF DL VDI+QN+SIT CL+ FS +ETL S+ K+ C
Sbjct: 51 DIFQGVLVNETKCLSCETVRSKQEDFLDLSVDIEQNSSITHCLKMFSGSETLSSEYKYYC 110
Query: 194 DNCASYQEA-------QGPNISAL 210
+ C S QEA + P I AL
Sbjct: 111 EQCCSKQEATKRLRIKKLPTILAL 134
>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 91/124 (73%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQALYFC PFR+ +LEY K
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/134 (50%), Positives = 102/134 (76%), Gaps = 3/134 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDA---DIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG ++ +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGY 356
Query: 446 ILFYQSRDSTDART 459
ILFY+S +++ ++
Sbjct: 357 ILFYESIGASNNKS 370
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 132/240 (55%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFGL N G TC
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKS 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLNFL
Sbjct: 61 IGDAEENLLTCLADLFTQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPD---GGGGDNHSSSGF-EEP--TWVHEIFQGILTSE 143
+N + +++ E + + S+P G + ++G +EP TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEKEAQAVKSDPETSSPPEKIANGPKHAQANGVSKEPLVTWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E L++CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEV 124
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 98/132 (74%), Gaps = 6/132 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMY 383
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + V P D Y
Sbjct: 243 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL----SNTVEPYADVEY 298
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
+L AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++
Sbjct: 299 SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDH 358
Query: 444 GYILFYQSRDST 455
GYILFY+S T
Sbjct: 359 GYILFYESLGPT 370
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 128/249 (51%), Gaps = 53/249 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFG N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
++ E + DL S ++ F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 90 INHINEVILSERPQSNAKSK-------------LSAPDGGGGDNHSSSGFEEP--TWVHE 134
+N + +++ E + + + L P G + +EP TWVH
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVH------KEPIVTWVHN 174
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCD 194
IFQGILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD
Sbjct: 175 IFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCD 234
Query: 195 NCASYQEAQ 203
C S QEAQ
Sbjct: 235 KCCSLQEAQ 243
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E L++CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEV 124
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 97/128 (75%), Gaps = 6/128 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMY 383
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + V P D Y
Sbjct: 243 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL----SNTVEPYADVEY 298
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
+L AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++
Sbjct: 299 SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDH 358
Query: 444 GYILFYQS 451
GYILFY+S
Sbjct: 359 GYILFYES 366
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 128/249 (51%), Gaps = 53/249 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFG N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
++ E + DL S ++ F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 90 INHINEVILSERPQSNAKSK-------------LSAPDGGGGDNHSSSGFEEP--TWVHE 134
+N + +++ E + + + L P G + +EP TWVH
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVH------KEPIVTWVHN 174
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCD 194
IFQGILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD
Sbjct: 175 IFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCD 234
Query: 195 NCASYQEAQ 203
C S QEAQ
Sbjct: 235 KCCSLQEAQ 243
>gi|336390086|gb|EGO31229.1| hypothetical protein SERLADRAFT_336365 [Serpula lacrymans var.
lacrymans S7.9]
Length = 272
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + +++K+++RV FP ELRLF+ DDA NPDR+Y L
Sbjct: 151 EKRMKIKRLPNVLALHLKRFKYQEDVQKYIKLAYRVAFPFELRLFNTVDDAQNPDRLYEL 210
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY+SI+++ FWL+FDDD VD I +S I +FG +S + Y
Sbjct: 211 FAIVVHIGTGPHHGHYVSIIRTMGFWLIFDDDTVDTIKESDIPKYFG-----DSNSGSAY 265
Query: 446 ILFYQS 451
+L+YQ+
Sbjct: 266 VLYYQA 271
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 24/144 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEF N+L+N I E + ER + P G T++H
Sbjct: 39 FRSTMHQDAHEFSNYLLNRIVEEMEDERKHYQT----AVPSGA-------------TFIH 81
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF+GILTSET+CL CE VS++DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 82 KIFEGILTSETRCLTCENVSARDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 141
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PN+ AL
Sbjct: 142 DSCCDLQEAEKRMKIKRLPNVLAL 165
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L L+ +I+ + G++AP+ FI +L++ + F + M QDAHEF N+L+N I E
Sbjct: 1 TLFSALRSLYIHISDNPVDKGTVAPRAFIDKLKELNELFRSTMHQDAHEFSNYLLNRIVE 60
Query: 327 K 327
+
Sbjct: 61 E 61
>gi|212722906|ref|NP_001132802.1| uncharacterized protein LOC100194291 [Zea mays]
gi|194695428|gb|ACF81798.1| unknown [Zea mays]
gi|413937406|gb|AFW71957.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 417
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LE+ G D+FP ERYFGL NFGNTCY NSVLQALY+C PFR+++LEY +N+
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYRRNRN 104
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK G IAPK+FI +RK + F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 321 INHI 324
+N I
Sbjct: 165 LNEI 168
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 102/139 (73%), Gaps = 3/139 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KK P IL +HLKRFK+++++NRH K+S+RVV+PLEL+L S ++ + D Y+L
Sbjct: 280 EKRMKIKKAPQILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKL---SSNSADADCEYSL 336
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN+GHY++++KSHD WL FDDD V+ I +ST++ F+G ++ +++ GY
Sbjct: 337 FAVVVHLGSGPNQGHYVAMIKSHDHWLSFDDDNVEMIPESTLQTFYGSYHEYSGNTDHGY 396
Query: 446 ILFYQSRDSTDARTMNSND 464
ILFY + +S+D
Sbjct: 397 ILFYGRIGGSGNEKTDSSD 415
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 132/241 (54%), Gaps = 44/241 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT--------S 49
G +S LE+ G D+FP ERYFGL N G TC + PF EQ +
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYRRNRN 104
Query: 50 LQDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFL 89
L+D C L + +S + F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTGVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-----EEP--TWVHEIFQGILTS 142
+N I +++ E+ S+AK +P +N S+ +EP TWVH+ FQGILT+
Sbjct: 165 LNEIVDIL--EKESSSAKD---SPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTN 219
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CET+++KDE FFDL VDI+QN+S+T CL+ F STETL +D+KF CD C S QEA
Sbjct: 220 ETRCLMCETITAKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEA 279
Query: 203 Q 203
+
Sbjct: 280 E 280
>gi|195621226|gb|ACG32443.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 417
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/124 (59%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LE+ G D+FP ERYFGL NFGNTCY NSVLQALY+C PFR+++LEY +KN+
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYSKNRN 104
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I+ KKK IAPK+FI +RK + F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTAVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 321 INHI 324
+N I
Sbjct: 165 LNEI 168
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 103/139 (74%), Gaps = 3/139 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KK P IL +HLKRFK+++++NRH K+S+RVV+PLEL+L S ++ + D Y+L
Sbjct: 280 EKRMKIKKAPQILVIHLKRFKFIEQLNRHKKLSYRVVYPLELKL---SSNSADADCEYSL 336
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN+GHY++++KSHD WL FDDD V+ I +ST++ F+G + ++ +++ GY
Sbjct: 337 FAVVVHLGSGPNQGHYVAMIKSHDHWLSFDDDNVEMIPESTLQTFYGSSREYSGNTDHGY 396
Query: 446 ILFYQSRDSTDARTMNSND 464
ILFY + +S+D
Sbjct: 397 ILFYGRIGGSGNEKTDSSD 415
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/241 (41%), Positives = 135/241 (56%), Gaps = 44/241 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G +S LE+ G D+FP ERYFGL N G TC + PF EQ
Sbjct: 46 GSGLSKLERAFG-DQFPEGERYFGLENFGNTCYCNSVLQALYYCAPFREQLLEYYSKNRN 104
Query: 48 ---------TSLQD---KISLGWECSLIL------ELDLCSSDEFDNYMQQDAHEFLNFL 89
T L D +IS + + ++ ++ ++ F YM QDAHEFLNFL
Sbjct: 105 LEDAEENLLTCLADLFSQISASKKKTAVIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFL 164
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-----EEP--TWVHEIFQGILTS 142
+N I +++ E+ S AK +P +N S+ +EP TWVH+ FQGILT+
Sbjct: 165 LNEIVDIL--EKESSCAKD---SPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTN 219
Query: 143 ETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
ET+CL CET+++KDE FFDL VDI+QN+S+T CL+ F STETL +D+KF CD C S QEA
Sbjct: 220 ETRCLMCETITAKDETFFDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEA 279
Query: 203 Q 203
+
Sbjct: 280 E 280
>gi|147810044|emb|CAN67091.1| hypothetical protein VITISV_006756 [Vitis vinifera]
Length = 366
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 100/131 (76%), Gaps = 3/131 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 237 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDA---DSEYSL 293
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S+++ FFG ++ +++ GY
Sbjct: 294 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESSVQTFFGSAQEYSSNTDHGY 353
Query: 446 ILFYQSRDSTD 456
ILFY+S + D
Sbjct: 354 ILFYESLATND 364
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 131/238 (55%), Gaps = 37/238 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKEDRIEKSQPFWEQ--------TSLQ 51
G S LEK +G D+FP ERYFGL N G TC + PF EQ +L
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCY-CNSALYFCVPFREQLLEYYTNNKNLA 59
Query: 52 DKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFLIN 91
D C L + + S + F +YM QDAHEFLNFL+N
Sbjct: 60 DAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLN 119
Query: 92 HINEVILSERPQSNAKSKLSAP---DGGGGDNHSSSGFE-EP--TWVHEIFQGILTSETK 145
+ +++ E S + + S+P G ++G + EP TWVH+ FQGILT+ET+
Sbjct: 120 ELVDILEKEASASKSDPETSSPPEKTANGPKTAQANGVQKEPLVTWVHKNFQGILTNETR 179
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 180 CLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 237
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 90/124 (72%), Gaps = 7/124 (5%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFGL NFGNTCY NS ALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNS---ALYFCVPFREQLLEYYTNNKN 57
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLNFL
Sbjct: 58 LADAEENLLTCLADLFMQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 117
Query: 321 INHI 324
+N +
Sbjct: 118 LNEL 121
>gi|388852296|emb|CCF54107.1| related to deubiquitinating enzyme ubh1 [Ustilago hordei]
Length = 1064
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 4/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R+VK+++RV FP ELRLF+ SDDA +PDR+Y L
Sbjct: 497 EKRMKIKKLPNVLALHLKRFKYEESVQRYVKLAYRVAFPQELRLFNTSDDAEDPDRLYEL 556
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYI++VK + W+ FDDDVV ID+ I ++G + + Y
Sbjct: 557 CAIVVHIGAGPHHGHYIAVVKVGNRWVQFDDDVVTYIDEFEITKYYG----DRPGLGSAY 612
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 613 VLFYQAVD 620
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 98/157 (62%), Gaps = 20/157 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINE-VILSERPQSNAKSKLSAP--DGGGG-----DNHS--- 122
FD+ M QDAHE LNF++N + E +I +++ + K + P + G G D HS
Sbjct: 355 FDSTMHQDAHEMLNFVLNKVGEDLIQADKAKGRVKMQSRNPYLNLGSGSHKTVDGHSKHS 414
Query: 123 --SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
G T VH +F+G+LT+ET+CL CETV+S+DE F DL +DI++N+S+T CLR FS
Sbjct: 415 VMQVGPNGNTCVHRLFEGVLTNETRCLTCETVTSRDECFLDLSIDIEKNSSVTSCLRQFS 474
Query: 181 STETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
++E L S NKF CD+C+ QEA+ PN+ AL
Sbjct: 475 ASEMLRSRNKFFCDSCSGLQEAEKRMKIKKLPNVLAL 511
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 32/40 (80%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
G+ NFGNTCY NS+LQ+LYFC+PFRD VL YK + +++
Sbjct: 133 LGMENFGNTCYVNSMLQSLYFCRPFRDSVLSYKHPSGRDR 172
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%)
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
LS +A+ V S A K F+ L++E FD+ M QDAHE LNF++N + E
Sbjct: 319 LSISTSSTGTLASGYPAVDSSAVKAFLGTLKRENVLFDSTMHQDAHEMLNFVLNKVGEDL 378
Query: 329 MKVKK 333
++ K
Sbjct: 379 IQADK 383
>gi|356525471|ref|XP_003531348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 2
[Glycine max]
Length = 383
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 99/129 (76%), Gaps = 3/129 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + +DA D Y+L
Sbjct: 254 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDA---DIEYSL 310
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 311 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 370
Query: 446 ILFYQSRDS 454
ILFY+S S
Sbjct: 371 ILFYESIGS 379
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 93/138 (67%), Gaps = 18/138 (13%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQ--------------ALYFCKP 249
G S LEK +G D+FP ERYFGL NFGNTCY NSVLQ ALYFC P
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGLENFGNTCYCNSVLQGALLTSFSFCHLVQALYFCVP 60
Query: 250 FRDRVLEYKAKNKK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFD 306
FR+++LEY NK +E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F
Sbjct: 61 FREQLLEYYGNNKSILDGEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFR 120
Query: 307 NYMQQDAHEFLNFLINHI 324
+YM QDAHEFLNFL+N +
Sbjct: 121 SYMHQDAHEFLNFLLNEL 138
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 94/136 (69%), Gaps = 6/136 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD----GGGGDNHSSSGFEEP 129
F +YM QDAHEFLNFL+N + +++ E + + S P G + ++ +EP
Sbjct: 119 FRSYMHQDAHEFLNFLLNELVDILEKEAQAAKTDQETSPPSEKAVNGPKNGQANGVHKEP 178
Query: 130 --TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
TWVH+ FQGILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +
Sbjct: 179 LVTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNA 238
Query: 188 DNKFKCDNCASYQEAQ 203
++KF CD C S QEAQ
Sbjct: 239 EDKFFCDKCCSLQEAQ 254
>gi|402222682|gb|EJU02748.1| hypothetical protein DACRYDRAFT_78606 [Dacryopinax sp. DJM-731 SS1]
Length = 900
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 13/143 (9%)
Query: 319 FLINHINEKC-----MKVKKLPMILALHLKRFKYMDKMNRHV---KVSHRVVFPLELRLF 370
F +H NE C MKVK LP +LALHLKRFKY++ NR++ K+++RV FPLELRLF
Sbjct: 175 FRCDHCNEYCDAEKRMKVKTLPNVLALHLKRFKYIEDANRNIRPTKLTYRVAFPLELRLF 234
Query: 371 HLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDF 430
SDDA NPDR+Y L A+V+H G+G GHY+++V++ W+LFDD+ VD I +S I +
Sbjct: 235 DTSDDAQNPDRLYELFAIVVHIGAGLAHGHYVTVVRTQGKWVLFDDEAVDVIKESDIMKY 294
Query: 431 FGLTSDHQKSSETGYILFYQSRD 453
FG Q GY+LFYQ+ D
Sbjct: 295 FGDAPGGQ-----GYVLFYQAVD 312
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 79/145 (54%), Gaps = 32/145 (22%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+F QDAHEFLN+L+N + E I R PT V
Sbjct: 82 DFRTSQHQDAHEFLNYLLNRVAEDIDENR-------------------------TRPTMV 116
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
+F+G+LT+ET+CL+C TVS +DE F DL +DI+ N+S+T CLR FS E L DN+F+
Sbjct: 117 QSLFEGLLTNETRCLSCNTVSHRDETFLDLSIDIEPNSSVTACLREFSKGEMLLEDNRFR 176
Query: 193 CDNCASYQEAQG-------PNISAL 210
CD+C Y +A+ PN+ AL
Sbjct: 177 CDHCNEYCDAEKRMKVKTLPNVLAL 201
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 44/73 (60%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+++ S L LF +I+ + ++ G ++P FI L+KE +F QDAHEFLN+L+N +
Sbjct: 44 QSIFSALRSLFLHISLNVEEKGMVSPSAFIAALKKENVDFRTSQHQDAHEFLNYLLNRVA 103
Query: 326 EKCMKVKKLPMIL 338
E + + P ++
Sbjct: 104 EDIDENRTRPTMV 116
>gi|343172716|gb|AEL99061.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 98/126 (77%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L S+ + DR Y+L
Sbjct: 104 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL---SETVEDTDREYSL 160
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 161 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 220
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 221 ILFYES 226
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Query: 116 GGGDNHSSSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
G G ++ +EP TWVH+ FQGILT+ET+CL CETV+++DE FFDL +DI+QN+SIT
Sbjct: 15 GPGSVQVNAPQKEPLVTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSIT 74
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CL+ FSSTETL +++KF CD C+S QEAQ
Sbjct: 75 SCLKNFSSTETLNAEDKFFCDKCSSLQEAQ 104
>gi|343172718|gb|AEL99062.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 98/126 (77%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L S+ + DR Y+L
Sbjct: 104 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL---SETVEDTDREYSL 160
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ ID+S ++ FFG + ++ +++ GY
Sbjct: 161 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 220
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 221 ILFYES 226
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/74 (67%), Positives = 64/74 (86%)
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TWVH+ FQGILT+ET+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++
Sbjct: 31 TWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAED 90
Query: 190 KFKCDNCASYQEAQ 203
KF CD C+S QEAQ
Sbjct: 91 KFFCDKCSSLQEAQ 104
>gi|345568297|gb|EGX51194.1| hypothetical protein AOL_s00054g570 [Arthrobotrys oligospora ATCC
24927]
Length = 683
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 93/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKYM+ + RH K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 295 EKRMKIKRLPKVLALHLKRFKYMEDLGRHQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 354
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV+IH G GP GHY++I+KS + WLL+DD++V+ +D+S + +FFG +
Sbjct: 355 YAVIIHIGGGPYHGHYVAIIKSEEHGWLLYDDEMVEPVDKSFVRNFFG----DRPGLACA 410
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 411 YVLFYQ 416
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 11/141 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVI-----LSERPQSNAKSKL------SAPDGGGGDNHS 122
F + M QDAHEF N+++N + E + + +S S+L SA S
Sbjct: 155 FRSQMHQDAHEFFNYVLNEVIENVEDHAKAVNQNKSETSSRLIPETADSADSAKAVSTTS 214
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
S +WVH++F+G LTSETKCL CE VS +DE F DL +D+++++S+T CLR FS++
Sbjct: 215 ESVVPNTSWVHDLFEGALTSETKCLTCENVSRRDEPFLDLSIDLEKHSSVTSCLRNFSAS 274
Query: 183 ETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD C QEA+
Sbjct: 275 EMLCERNKFHCDVCGGLQEAE 295
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 254 VLEYKAKNKKN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
+L + N KN +E+L + + DLF ++ ++ + G ++P +F+ L+ + + F + M
Sbjct: 101 ILNVEVANSKNYHMEESLFTAMKDLFESVVANESRTGVVSPLRFVEVLKMKNELFRSQMH 160
Query: 311 QDAHEFLNFLINHINE 326
QDAHEF N+++N + E
Sbjct: 161 QDAHEFFNYVLNEVIE 176
>gi|384254258|gb|EIE27732.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 383
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/125 (57%), Positives = 93/125 (74%), Gaps = 4/125 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-- 261
G S LEK + FP ERYFGL NFGNTCY+NSVLQ+LYFC+PFR RVLEY +
Sbjct: 2 GVTSSKLEKALS--EFPETERYFGLENFGNTCYANSVLQSLYFCQPFRRRVLEYAQSSSY 59
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K+++E LL+CLADLF I + K+K G IAPK+F+ RL+++ + F +YM QDAHEFLN+L+
Sbjct: 60 KESEENLLTCLADLFVQIQSQKRKTGIIAPKRFVQRLKRDNELFRSYMHQDAHEFLNYLL 119
Query: 322 NHINE 326
N +E
Sbjct: 120 NECSE 124
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 90/132 (68%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK++ LP +L LHLKRFKY+++++R K+ +RVVFP EL+L + S+D + D Y L
Sbjct: 251 QKVMKIRALPRVLCLHLKRFKYIEQLDRMRKLVYRVVFPFELKLRNTSEDCAHVDDAYQL 310
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S VKS + WL FDDD+V+ + + + FG T ++ + E GY
Sbjct: 311 FAVVVHVGSGPNHGHYVSFVKSAEHWLFFDDDMVEPMSEQQVHLAFGSTQEYSNTMEHGY 370
Query: 446 ILFYQSRDSTDA 457
IL Y+ + A
Sbjct: 371 ILMYERQPCNGA 382
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 123/254 (48%), Gaps = 55/254 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPF-------WEQTSL 50
G S LEK + FP ERYFGL N G TC + QPF + +S
Sbjct: 2 GVTSSKLEKALS--EFPETERYFGLENFGNTCYANSVLQSLYFCQPFRRRVLEYAQSSSY 59
Query: 51 QDKISLGWECSLILELDLCSSDE--------------------FDNYMQQDAHEFLNFLI 90
++ C L + + S F +YM QDAHEFLN+L+
Sbjct: 60 KESEENLLTCLADLFVQIQSQKRKTGIIAPKRFVQRLKRDNELFRSYMHQDAHEFLNYLL 119
Query: 91 NHINEVILSERPQSNAK---------------------SKLSAPDGGGGDNHSSSGFEEP 129
N +E++ E A+ + + P+ G S +
Sbjct: 120 NECSELLEREAKARAAREDASGQVSSSSAAAPAQQQSEGQSAEPEQGSSQQQSQAA--PA 177
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TWVHE+FQG + +ETKCL CETV+S++E F+DL ++I+QN S+T CLR FS+TETL +D+
Sbjct: 178 TWVHELFQGFMLNETKCLECETVTSREEAFYDLSLEIEQNCSLTACLRNFSATETLDADD 237
Query: 190 KFKCDNCASYQEAQ 203
KF CD C S Q+AQ
Sbjct: 238 KFFCDKCKSLQDAQ 251
>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 366
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G + S LEK +G D FP E YFGL NFGNTCY NSVLQALYFC PFR+++L+Y KNK
Sbjct: 2 GGSGSKLEKALG-DNFPEGEHYFGLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKN 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E LL+CLA+LF I++ K+K G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L
Sbjct: 61 ITDAEENLLTCLAELFSQISSQKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEL 124
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 95/126 (75%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+K+ P +L +HLKRFKYM+++ R+ K+S+RVVFPLELRL SD D Y+L
Sbjct: 240 QKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRVVFPLELRL---SDTDEEADIEYSL 296
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+ +VK+H+ WL FDD+ V+ +D+++++ FFG T D +++ GY
Sbjct: 297 FAVVVHVGSGPNHGHYVCLVKNHNHWLCFDDETVEVVDEASVQTFFGSTQDFNNNTDHGY 356
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 357 ILFYES 362
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 38/240 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G + S LEK +G D FP E YFGL N G TC
Sbjct: 2 GGSGSKLEKALG-DNFPEGEHYFGLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKN 60
Query: 32 --KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFL 89
+E+ + + Q S Q + + ++ ++ F +YM QDAHEFLN+L
Sbjct: 61 ITDAEENLLTCLAELFSQISSQKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 90 INHINEVILSERPQSNAKSKLSAPD---GGGGDNHSSSGFEEP---TWVHEIFQGILTSE 143
+N + +++ E P G + ++G ++ TWVH+ FQGILT+E
Sbjct: 121 LNELVDILEREAHAEKDDQGTLLPSEKIANGPKSGLANGAKKAPLATWVHKNFQGILTNE 180
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+CL CETV+++DE FFDL +DI+QN+SIT CL+ FSSTETL +++KF CD C S QEAQ
Sbjct: 181 TRCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ 240
>gi|413918516|gb|AFW58448.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 490
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 97/125 (77%), Gaps = 3/125 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFP+EL+L + SDD D Y+L
Sbjct: 363 QKRMKIKKAPHILVIHLKRFKYIEQLGRYKKLSYRVVFPMELKLSNSSDDV---DTEYSL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ +++ T++ FFG + ++ +++ GY
Sbjct: 420 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMVEEQTLQTFFGTSHEYSGNTDHGY 479
Query: 446 ILFYQ 450
ILFY+
Sbjct: 480 ILFYE 484
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 94/137 (68%), Gaps = 9/137 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER------PQSNAKSKLSAPDGGGGDNHSSSGFE 127
F +YM QDAHEFLNFL+N + +++ E PQS++ K AP+G + E
Sbjct: 229 FRSYMHQDAHEFLNFLLNELVDILEKESSAAKDSPQSSSPEK--APNGPVQPLANGVKKE 286
Query: 128 EP-TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC 186
P T VH+ FQGILT+ET+CL CETV+++DE F DL VDI+QN+SIT CL+ F STETL
Sbjct: 287 PPVTLVHKSFQGILTNETRCLRCETVTARDETFLDLSVDIEQNSSITSCLKNFCSTETLN 346
Query: 187 SDNKFKCDNCASYQEAQ 203
+++KF CD C S QEAQ
Sbjct: 347 AEDKFFCDKCCSLQEAQ 363
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Query: 250 FRDRVLEYKAKNKK---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFD 306
FR+++LEY A NK +E LL+CLADLF I+ KKK G IAPK+F+ R++K+ + F
Sbjct: 171 FREQLLEYYANNKTPGDAEENLLTCLADLFMQISQAKKKTGVIAPKRFVQRVKKQNELFR 230
Query: 307 NYMQQDAHEFLNFLINHI 324
+YM QDAHEFLNFL+N +
Sbjct: 231 SYMHQDAHEFLNFLLNEL 248
>gi|389742087|gb|EIM83274.1| cysteine proteinase, partial [Stereum hirsutum FP-91666 SS1]
Length = 382
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 93/128 (72%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY D + +++K+++RV FPLELRLF+ DDA +PDR+Y L
Sbjct: 260 EKRMKIKKLPNVLALHLKRFKYQDDVQKYIKLAYRVAFPLELRLFNTVDDAQDPDRLYEL 319
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYI+IVK WL+FDDD + I +S I +FG S + Y
Sbjct: 320 FAIVVHIGNGPHHGHYITIVKGPTSWLVFDDDKIGPIKESDIPKYFG-----DSPSGSAY 374
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 375 VLYYQAVD 382
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 92/144 (63%), Gaps = 14/144 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLN+L+N I E + + + DG G D + S ++ T VH
Sbjct: 138 FRSTMHQDAHEFLNYLLNKIVEEVGVDEHHKDK-------DGEGEDLRTGSSQDDTTLVH 190
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 191 RLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 250
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PN+ AL
Sbjct: 251 DSCCGLQEAEKRMKIKKLPNVLAL 274
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 15/119 (12%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK---------------KNKETL 268
+ FGL NFGNTCY+NSVLQALYFC PFRD +++ + + TL
Sbjct: 42 KQFGLENFGNTCYANSVLQALYFCAPFRDLIIQSTDSSSPTNLSSPTSLGFSIPPSPPTL 101
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
S L LF I+ + G+++P+ FI +L++ + F + M QDAHEFLN+L+N I E+
Sbjct: 102 FSALRSLFVFISKNPMDRGTVSPRAFIDKLKEVNELFRSTMHQDAHEFLNYLLNKIVEE 160
>gi|326502202|dbj|BAJ95164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 6/125 (4%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LEK +G D+FP E YFGL NFGNTCY NSVLQALY+C PFR+++LEY A N +
Sbjct: 45 GTGVSRLEKTLG-DQFPEGEHYFGLENFGNTCYCNSVLQALYYCIPFREQLLEYYA-NYR 102
Query: 264 N----KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNF 319
N +E LL+CLADLF I+ KKK G I+PK+F+ R+RK+ + F M QDAHEFLNF
Sbjct: 103 NPGDAEENLLTCLADLFAQISLSKKKTGVISPKRFVHRVRKQNESFRGSMHQDAHEFLNF 162
Query: 320 LINHI 324
L+N I
Sbjct: 163 LLNEI 167
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 97/126 (76%), Gaps = 3/126 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFK+++++++H K+S+RVV+P+EL+L SDD D Y+L
Sbjct: 282 QKRMKIKKAPQILVIHLKRFKFIEQLSQHKKLSYRVVYPMELKLSSASDDV---DCAYSL 338
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSG N+GHY+S +KS D WL FDDD VD+I +ST++ F+G + ++ +++ GY
Sbjct: 339 FAVVVHLGSGANQGHYVSQIKSGDHWLSFDDDSVDRIQESTLQTFYGSSREYSGNTDHGY 398
Query: 446 ILFYQS 451
ILFY+S
Sbjct: 399 ILFYES 404
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/239 (41%), Positives = 131/239 (54%), Gaps = 37/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G +S LEK +G D+FP E YFGL N G TC + PF EQ
Sbjct: 45 GTGVSRLEKTLG-DQFPEGEHYFGLENFGNTCYCNSVLQALYYCIPFREQLLEYYANYRN 103
Query: 48 ---------TSLQD---KISLGWECSLILELDLC------SSDEFDNYMQQDAHEFLNFL 89
T L D +ISL + + ++ ++ F M QDAHEFLNFL
Sbjct: 104 PGDAEENLLTCLADLFAQISLSKKKTGVISPKRFVHRVRKQNESFRGSMHQDAHEFLNFL 163
Query: 90 INHINEVILSERPQSNAKSKLSAPD--GGGGDNHSSSGFE-EP--TWVHEIFQGILTSET 144
+N I +++ E N + ++P G H ++ F EP TWVH+ FQGILT+ET
Sbjct: 164 LNEIVDILEKEFSTVNDSPETTSPGRVPNGEVYHLANEFRREPLVTWVHKNFQGILTNET 223
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KCL CETV++KDE F DL +DI+QN+S+T CL+ F STE L +++KF CDNC S QEAQ
Sbjct: 224 KCLMCETVTAKDETFLDLSIDIEQNSSLTSCLKSFFSTEILNAEDKFFCDNCCSLQEAQ 282
>gi|353236423|emb|CCA68418.1| hypothetical protein PIIN_02282 [Piriformospora indica DSM 11827]
Length = 1157
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 94/131 (71%), Gaps = 8/131 (6%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY +++ ++VK+S+RV FP ELRLF+ DDA + DR+Y L
Sbjct: 459 EKRMKIKRLPNVLALHLKRFKYQEELQKYVKLSYRVAFPFELRLFNTVDDAADMDRLYEL 518
Query: 386 VAVVIHCG---SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
A+V+H G SGP GHYI+I+KS W +FDD+ V+ I +S I +FG + S
Sbjct: 519 WAIVVHIGGVYSGPLHGHYITIIKSQGSWQVFDDESVETIRESDIPKYFG-----EGGSG 573
Query: 443 TGYILFYQSRD 453
TGY+LFYQ+ D
Sbjct: 574 TGYVLFYQATD 584
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/164 (45%), Positives = 94/164 (57%), Gaps = 27/164 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE----RPQSNAK---------SKLSAPD------ 114
F M QDAHEFLN+LIN + E I E R + NA S L+ D
Sbjct: 310 FRTTMHQDAHEFLNYLINRVVEDIEEEDTLLRKRENAAIVKEKGATLSPLATEDLSTSIT 369
Query: 115 -GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
HSSS T++H++F+G LTSET+CL CETVS +DE F DL +DI+QN+S+T
Sbjct: 370 TSATSQTHSSSSLSRKTFIHDLFEGTLTSETRCLTCETVSPRDEPFLDLSIDIEQNSSVT 429
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
CLR FS++E LC NKF CD+C QEA+ PN+ AL
Sbjct: 430 ACLRQFSASEMLCQRNKFFCDSCCGLQEAEKRMKIKRLPNVLAL 473
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+ +L S L LF +I+ H G++ P FIT+LRKE + F M QDAHEFLN+LIN
Sbjct: 269 SPPSLFSALRSLFIHISQHPHDKGTVNPNAFITKLRKENELFRTTMHQDAHEFLNYLINR 328
Query: 324 INE 326
+ E
Sbjct: 329 VVE 331
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/21 (71%), Positives = 18/21 (85%)
Query: 235 CYSNSVLQALYFCKPFRDRVL 255
Y+NSVLQALYFC PFRD ++
Sbjct: 169 SYANSVLQALYFCDPFRDLII 189
>gi|170084517|ref|XP_001873482.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651034|gb|EDR15274.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 368
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 95/128 (74%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R++K+++RV FP++LRLF+ DD + DR+YNL
Sbjct: 246 EKRMKIKKLPNVLALHLKRFKYQEDVGRYIKLAYRVAFPMDLRLFNTVDDMDDSDRLYNL 305
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H G+GP+ GHYISI+K+H WL+FDDD V I +S I +FG +S + Y
Sbjct: 306 FAVVVHIGNGPHHGHYISIIKTHGSWLVFDDDNVSTIPESDIPKYFG-----DSNSGSAY 360
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 361 VLYYQAAD 368
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 16/144 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F M QD HEFL FL+N I + + GG + ++ T VH
Sbjct: 126 FRGTMHQDTHEFLMFLLNRI---------VEEIEEERKELLNGGAKEEDRTSPQDATLVH 176
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 177 KLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 236
Query: 194 DNCASYQEAQG-------PNISAL 210
D C QEA+ PN+ AL
Sbjct: 237 DACCDLQEAEKRMKIKKLPNVLAL 260
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDR---VLEYK--AKNKKNKETLLSCLADLF 276
+ + FGL NFGNTCY+NSVLQALYFC PFRD L Y + TL S L LF
Sbjct: 38 DAKKFGLENFGNTCYANSVLQALYFCTPFRDLPAVTLPYAPIPPIPSSPPTLFSALRSLF 97
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
I++H K+ G+++P+ FI ++++ + F M QD HEFL FL+N
Sbjct: 98 LYISSHPKERGTVSPRAFIDKVKELNELFRGTMHQDTHEFLMFLLN 143
>gi|125539986|gb|EAY86381.1| hypothetical protein OsI_07760 [Oryza sativa Indica Group]
Length = 415
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 90/124 (72%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LEK +G + FP ERYFGL NFGNTCY NSVLQALY C PFR+++LEY A K
Sbjct: 51 GAGVSKLEKALG-EHFPEGERYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKN 109
Query: 264 NKET---LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+++ LL+CLADLF I KK+ G +APK+F+ R+RK+ + F +YM QDAHEF NFL
Sbjct: 110 TEDSEDNLLTCLADLFAQITLAKKRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFL 169
Query: 321 INHI 324
+N I
Sbjct: 170 VNDI 173
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MK+KK P +L +HLKRFKY+++++RH K+S+RVV+PLEL+L +S+DA D Y+L
Sbjct: 288 KRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDA---DCEYSLF 344
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-QKSSETGY 445
AVV+H GS PN GHY+S +KSH WL FDDD V ++ST++ F+G + +H +++ GY
Sbjct: 345 AVVVHVGSSPNHGHYVSQIKSHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHGY 404
Query: 446 ILFYQ 450
ILFY+
Sbjct: 405 ILFYE 409
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 128/239 (53%), Gaps = 38/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G +S LEK +G + FP ERYFGL N G TC + PF EQ
Sbjct: 51 GAGVSKLEKALG-EHFPEGERYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKN 109
Query: 48 ---------TSLQD---KISLGWECSLIL------ELDLCSSDEFDNYMQQDAHEFLNFL 89
T L D +I+L + + +L + ++ F +YM QDAHEF NFL
Sbjct: 110 TEDSEDNLLTCLADLFAQITLAKKRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFL 169
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF---EEP--TWVHEIFQGILTSET 144
+N I + IL E ++ S + P+ ++ E P T VH FQGILT+ET
Sbjct: 170 VNDIID-ILEEDCRTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNET 228
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KCL C+T+++KDE FFDL +D++QN+S+T CL+ F STE L ++KF CD C+S QEA
Sbjct: 229 KCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAH 287
>gi|242210465|ref|XP_002471075.1| predicted protein [Postia placenta Mad-698-R]
gi|220729865|gb|EED83732.1| predicted protein [Postia placenta Mad-698-R]
Length = 269
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP ILALHLKRFKY + + +++K+++RV FP +LRLF+ DDA NPDR+Y L
Sbjct: 148 EKRMKIKKLPNILALHLKRFKYQEDVGKYIKLAYRVAFPFQLRLFNTVDDAENPDRLYEL 207
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHY++I+K+ WLLFDDD VD I +S I ++G + ++ + Y
Sbjct: 208 FAIVVHIGNGPHHGHYVTIIKARGTWLLFDDDSVDTIKESDIPKYYG-----ESTNGSAY 262
Query: 446 ILFYQS 451
+L+YQ+
Sbjct: 263 VLYYQA 268
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/144 (47%), Positives = 87/144 (60%), Gaps = 27/144 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F M QDAHEFLNFL+N I E + +R +L P + T VH
Sbjct: 39 FRGSMHQDAHEFLNFLLNKIVEEMEDDR-------RLGYP-------------VQATIVH 78
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 79 RLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 138
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PNI AL
Sbjct: 139 DSCCDLQEAEKRMKIKKLPNILAL 162
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TLLS L LF +I+ H + GS+AP+ FI +L++ + F M QDAHEFLNFL+N I E
Sbjct: 1 TLLSALRSLFVHISRHPAERGSVAPRAFIDKLKELNELFRGSMHQDAHEFLNFLLNKIVE 60
Query: 327 K 327
+
Sbjct: 61 E 61
>gi|115446845|ref|NP_001047202.1| Os02g0573400 [Oryza sativa Japonica Group]
gi|46806341|dbj|BAD17530.1| putative ubiquitin-specific protease 3 (UBP3) [Oryza sativa
Japonica Group]
gi|113536733|dbj|BAF09116.1| Os02g0573400 [Oryza sativa Japonica Group]
Length = 415
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G +S LEK +G D FP RYFGL NFGNTCY NSVLQALY C PFR+++LEY A K
Sbjct: 51 GAGVSKLEKALG-DHFPEGARYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKN 109
Query: 264 NKET---LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+++ LL+CLADLF I KK+ G +APK+F+ R+RK+ + F +YM QDAHEF NFL
Sbjct: 110 TEDSEDNLLTCLADLFSQITLAKKRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFL 169
Query: 321 INHI 324
+N I
Sbjct: 170 VNDI 173
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MK+KK P +L +HLKRFKY+++++RH K+S+RVV+PLEL+L +S+DA D Y+L
Sbjct: 288 KRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDA---DCEYSLF 344
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-QKSSETGY 445
AVV+H GS PN GHY+S +KSH WL FDDD V ++ST++ F+G + +H +++ GY
Sbjct: 345 AVVVHVGSSPNHGHYVSQIKSHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHGY 404
Query: 446 ILFYQ 450
ILFY+
Sbjct: 405 ILFYE 409
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 127/239 (53%), Gaps = 38/239 (15%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQ---------- 47
G +S LEK +G D FP RYFGL N G TC + PF EQ
Sbjct: 51 GAGVSKLEKALG-DHFPEGARYFGLENFGNTCYCNSVLQALYHCIPFREQLLEYYATYKN 109
Query: 48 ---------TSLQD---KISLGWECSLIL------ELDLCSSDEFDNYMQQDAHEFLNFL 89
T L D +I+L + + +L + ++ F +YM QDAHEF NFL
Sbjct: 110 TEDSEDNLLTCLADLFSQITLAKKRTGVLAPKRFVQRVRKQNELFRSYMHQDAHEFWNFL 169
Query: 90 INHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF---EEP--TWVHEIFQGILTSET 144
+N I + IL E ++ S + P+ ++ E P T VH FQGILT+ET
Sbjct: 170 VNDIID-ILEEDCRTANSSPETTPEEVSNGAANALANGARERPLVTLVHRTFQGILTNET 228
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KCL C+T+++KDE FFDL +D++QN+S+T CL+ F STE L ++KF CD C+S QEA
Sbjct: 229 KCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGEDKFFCDKCSSLQEAH 287
>gi|296826590|ref|XP_002851002.1| ubiquitin C-terminal hydrolase CreB [Arthroderma otae CBS 113480]
gi|238838556|gb|EEQ28218.1| ubiquitin C-terminal hydrolase CreB [Arthroderma otae CBS 113480]
Length = 796
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 294 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 353
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 354 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DRPGQACA 409
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 410 YVLFYQ 415
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 18/144 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNH-----------S 122
F M QDAHEFLN L+N EV+ + ++ S L A DG + +
Sbjct: 155 FRTAMHQDAHEFLNLLLN---EVVSNVEAEARRTSMLEA-DGDSESSTPTSTSVATTLAT 210
Query: 123 SSGFEEP---TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
S G + P WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T CLR F
Sbjct: 211 SVGAKTPYNTRWVHELFEGKLTSETECLTCEKKSQRDEVFLDLSVDLEQHSSVTSCLRKF 270
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S E LC NKF CDNC QEA+
Sbjct: 271 SEEEMLCERNKFHCDNCGGLQEAE 294
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA ++++G + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 109 SQNYGMQESLFTSLKDIFESIAASQERMGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 168
Query: 319 FLINHI 324
L+N +
Sbjct: 169 LLLNEV 174
>gi|326476285|gb|EGE00295.1| ubiquitin C-terminal hydrolase CreB [Trichophyton tonsurans CBS
112818]
Length = 881
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPRILALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 80/150 (53%), Gaps = 27/150 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD------------------- 114
F M QDAHEFLN L+N EV+ + ++N S L A
Sbjct: 220 FRTAMHQDAHEFLNLLLN---EVVNNVEAEANRTSMLEADADSESSTATSTSVATTLATS 276
Query: 115 -GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
GG S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 277 VGGSAKTPPYST----RWVHELFEGKLTSETECLTCEKKSQRDEAFLDLSVDLEQHSSVT 332
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 333 SCLRKFSQEEMLCERNKFHCDNCGGLQEAE 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 174 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 233
Query: 319 FLINHI 324
L+N +
Sbjct: 234 LLLNEV 239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 207 ISALEKEIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ L + GP + ++++FG+ N F NTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 37 LQKLLSDAGPLKSDGSDKFFGMENAPFANTCYCNSILQCLYYSAPFRESVINYPQRS 93
>gi|326478997|gb|EGE03007.1| ubiquitin carboxyl-terminal hydrolase [Trichophyton equinum CBS
127.97]
Length = 881
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPRILALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 80/150 (53%), Gaps = 27/150 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD------------------- 114
F M QDAHEFLN L+N EV+ + ++N S L A
Sbjct: 220 FRTAMHQDAHEFLNLLLN---EVVNNVEAEANRTSMLEADADSESSTATSTSVATTLATS 276
Query: 115 -GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
GG S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 277 VGGSAKTPPYST----RWVHELFEGKLTSETECLTCEKKSQRDEVFLDLSVDLEQHSSVT 332
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 333 SCLRKFSQEEMLCERNKFHCDNCGGLQEAE 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 174 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 233
Query: 319 FLINHI 324
L+N +
Sbjct: 234 LLLNEV 239
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 207 ISALEKEIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ L + GP + ++++FG+ N F NTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 37 LQKLLSDAGPLKSDGSDKFFGMENAPFANTCYCNSILQCLYYSAPFRESVINYPQRS 93
>gi|327294411|ref|XP_003231901.1| ubiquitin C-terminal hydrolase CreB [Trichophyton rubrum CBS
118892]
gi|326465846|gb|EGD91299.1| ubiquitin C-terminal hydrolase CreB [Trichophyton rubrum CBS
118892]
Length = 878
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 361 EKRMKIKRLPRILALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 420
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 421 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 476
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 477 YVLFYQ 482
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 81/150 (54%), Gaps = 28/150 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD------------------- 114
F M QDAHEFLN L+N EV+ + ++N S L A
Sbjct: 220 FRTAMHQDAHEFLNLLLN---EVVNNVEAEANRTSMLEADADSESSTATSTSLATTLATS 276
Query: 115 -GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
GG S+ WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 277 VGGSAKTPYST-----RWVHELFEGKLTSETECLTCEKKSQRDEAFLDLSVDLEQHSSVT 331
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 332 SCLRKFSQEEMLCERNKFHCDNCGGLQEAE 361
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 174 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 233
Query: 319 FLINHI 324
L+N +
Sbjct: 234 LLLNEV 239
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 207 ISALEKEIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ L + GP + ++++FG+ N F NTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 36 LQKLLSDAGPLKSDGSDKFFGMENAPFANTCYCNSILQCLYYSAPFRESVINYPQRS 92
>gi|302665211|ref|XP_003024218.1| ubiquitin C-terminal hydrolase CreB [Trichophyton verrucosum HKI
0517]
gi|291188264|gb|EFE43607.1| ubiquitin C-terminal hydrolase CreB [Trichophyton verrucosum HKI
0517]
Length = 876
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 363 EKRMKIKRLPRILALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 422
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 423 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 478
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 479 YVLFYQ 484
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/150 (43%), Positives = 82/150 (54%), Gaps = 28/150 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPD------------------- 114
F M QDAHEFLN L+N EV+ + ++N S L A
Sbjct: 222 FRTAMHQDAHEFLNLLLN---EVVNNVEAEANRTSMLEADADSESSTATSTSVATTLATS 278
Query: 115 -GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT 173
GG + S+ WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 279 VGGSAKSPYST-----RWVHELFEGKLTSETECLTCEKKSQRDEAFLDLSVDLEQHSSVT 333
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 334 SCLRKFSQEEMLCERNKFHCDNCGGLQEAE 363
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 176 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 235
Query: 319 FLINHI 324
L+N +
Sbjct: 236 LLLNEV 241
>gi|255947126|ref|XP_002564330.1| Pc22g02860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591347|emb|CAP97574.1| Pc22g02860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 766
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 348 EKRMKIKRLPRVLALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 407
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 408 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKSYVRNFFG----DRPGLACA 463
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 464 YVLFYQ 469
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG---GDNHSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + K P G S+G + P
Sbjct: 213 FRTAMHQDAHEFLNLLLNEVVANVETEATKQAFTEKALPPTESADSLGTLTPSTGSKSPN 272
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSETKCL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 273 TTRWVHELFEGTLTSETKCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 332
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 333 RNKFHCDNCGGLQEAE 348
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P++F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 174 ESLFTSLKDIFESVVGSQARIGIVRPQQFLDVLRRENEMFRTAMHQDAHEFLNLLLNEV 232
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 203 QGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
Q P IS LEK ++G R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+ Y
Sbjct: 28 QVPQISPLEKRLQDMGSIRADGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPQ 87
Query: 260 K 260
+
Sbjct: 88 R 88
>gi|302503460|ref|XP_003013690.1| ubiquitin C-terminal hydrolase CreB [Arthroderma benhamiae CBS
112371]
gi|291177255|gb|EFE33050.1| ubiquitin C-terminal hydrolase CreB [Arthroderma benhamiae CBS
112371]
Length = 1147
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 622 EKRMKIKRLPRILALHLKRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 681
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 682 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 737
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 738 YVLFYQ 743
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 80/148 (54%), Gaps = 24/148 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSA------------------PDG 115
F M QDAHEFLN L+N EV+ + ++N S L A
Sbjct: 481 FRTAMHQDAHEFLNLLLN---EVVNNVEAEANRTSMLEADADSESSTATSTSVATTLATS 537
Query: 116 GGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQC 175
GG S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T C
Sbjct: 538 VGGSAKSPYSTR---WVHELFEGKLTSETECLTCEKKSQRDEAFLDLSVDLEQHSSVTSC 594
Query: 176 LRGFSSTETLCSDNKFKCDNCASYQEAQ 203
LR FS E LC NKF CDNC QEA+
Sbjct: 595 LRKFSQEEMLCERNKFHCDNCGGLQEAE 622
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 435 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 494
Query: 319 FLINHI 324
L+N +
Sbjct: 495 LLLNEV 500
>gi|242770179|ref|XP_002341925.1| ubiquitin C-terminal hydrolase CreB [Talaromyces stipitatus ATCC
10500]
gi|218725121|gb|EED24538.1| ubiquitin C-terminal hydrolase CreB [Talaromyces stipitatus ATCC
10500]
Length = 762
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 360 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 420 YAVVVHIGGGPYHGHYVSIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DRPGLACA 475
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 476 YVLFYQ 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 93/156 (59%), Gaps = 16/156 (10%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQ---------SNAKSKLSAPD 114
LE+ ++ F M QDAHEFLN L+N + + +E + ++++ ++ D
Sbjct: 205 LEVLRRENEMFRTAMHQDAHEFLNLLLNEVVTNVEAESAKQIENPPVETTDSEQTVAVTD 264
Query: 115 GG----GGDNHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK 167
G + S+G + P WVHE+F+G LTSET+CL CE VS +DE F DL VD++
Sbjct: 265 SSTNSTGTQVNGSTGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLE 324
Query: 168 QNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
Q++S+T CLR FS+ E LC NKF CDNC QEA+
Sbjct: 325 QHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAE 360
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF N+ + K+G + P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 176 ESLFTSLKDLFENVVASQSKLGVVRPQHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEV 234
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 3/57 (5%)
Query: 207 ISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
I+ LEK + GP R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+ Y +
Sbjct: 33 ITPLEKMLQDSGPVRADGSDKFFGMENYGNTCYCNSILQCLYYSVPFRESVINYPKR 89
>gi|425768622|gb|EKV07140.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
gi|425776047|gb|EKV14285.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
Length = 793
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 369 EKRMKIKRLPRVLALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 428
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 429 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKSYVRNFFG----DRPGLACA 484
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 485 YVLFYQ 490
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 8/137 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN----HSSSGFEEP 129
F M QDAHEFLN L+N + + +E + + K + P D+ SS+G + P
Sbjct: 234 FRTAMHQDAHEFLNLLLNEVVANVETEATKQSFIEK-ALPPTESVDSLAMVPSSTGSKSP 292
Query: 130 T---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC 186
WVHE+F+G LTSETKCL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 293 NTTRWVHELFEGTLTSETKCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLC 352
Query: 187 SDNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 353 ERNKFHCDNCGGLQEAE 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P++F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 195 ESLFTSLKDIFESVVASQARIGIVRPQQFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 253
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 203 QGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
Q P +S LEK ++G R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+ Y
Sbjct: 49 QVPQLSPLEKRLQDMGSIRGDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPR 108
Query: 260 KN 261
+
Sbjct: 109 RT 110
>gi|334184367|ref|NP_001189575.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|330252198|gb|AEC07292.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 379
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + D+ V D Y+L
Sbjct: 252 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV--DIEYSL 309
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++ GY
Sbjct: 310 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGY 369
Query: 446 ILFYQS 451
IL Y+S
Sbjct: 370 ILLYES 375
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 95/138 (68%), Gaps = 16/138 (11%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQ--------------ALYFCKP 249
G S LEK +G D+FP ERYFG NFGNTCY NSVLQ ALYFC P
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAP 60
Query: 250 FRDRVLEYKAKNKKN-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNY 308
FR+++LE+ A NK + +E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +Y
Sbjct: 61 FREQLLEHYANNKADAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSY 120
Query: 309 MQQDAHEFLNFLINHINE 326
M QDAHEFLN+L+N + E
Sbjct: 121 MHQDAHEFLNYLLNELVE 138
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 95/143 (66%), Gaps = 20/143 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSK-----------LSAPDGGGGDNHS 122
F +YM QDAHEFLN+L+N + E++ E + A ++ L AP G
Sbjct: 117 FRSYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVH--- 173
Query: 123 SSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
+EP TWVH+IFQGILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FS
Sbjct: 174 ----KEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFS 229
Query: 181 STETLCSDNKFKCDNCASYQEAQ 203
STETL +++KF CD C S QEAQ
Sbjct: 230 STETLHAEDKFFCDKCCSLQEAQ 252
>gi|212541927|ref|XP_002151118.1| ubiquitin hydrolase CreB [Talaromyces marneffei ATCC 18224]
gi|210066025|gb|EEA20118.1| ubiquitin hydrolase CreB [Talaromyces marneffei ATCC 18224]
Length = 730
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 323 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 382
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 383 YAVVVHIGGGPYHGHYVSIIKTEDRGWLLFDDEMVEPVDKSYVHNFFG----DRPGLACA 438
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 439 YVLFYQ 444
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 90/157 (57%), Gaps = 18/157 (11%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSER-------PQSNAKSKL------ 110
LE+ ++ F M QDAHEFLN L+N + + +E P N S+
Sbjct: 168 LEVLRRENEMFRTAMHQDAHEFLNLLLNEVVTNVEAESFKQIENFPADNTDSEQTVALMD 227
Query: 111 -SAPDGGGGDNHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
S P N S+G + P WVHE+F+G LTSET+CL CE VS +DE F DL VD+
Sbjct: 228 SSTPSTRTQVN-GSTGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDL 286
Query: 167 KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+Q++S+T CLR FS+ E LC NKF CDNC QEA+
Sbjct: 287 EQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAE 323
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + K+G + P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 139 ESLFTSLKDIFESVVGSQSKLGIVRPHHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEV 197
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLA 273
++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+ Y + E+L + LA
Sbjct: 14 SDKFFGMENYGNTCYCNSILQCLYYSAPFRESVINYPKRTP--IESLETALA 63
>gi|452001543|gb|EMD94002.1| hypothetical protein COCHEDRAFT_1222608 [Cochliobolus
heterostrophus C5]
Length = 745
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 8/149 (5%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI----LSERPQSNAKSKLSAPDGGG- 117
+LE+ ++ F M QDAHEFLN L+N + E + S ++NA + + G
Sbjct: 214 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENVEQFSKSRAAEANAIEENGSATASGE 273
Query: 118 ---GDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
N ++ WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 274 VVPAQNSVAAAKPNSGWVHELFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTS 333
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 334 CLRKFSEEEMLCERNKFHCDNCGGLQEAE 362
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN L+N +
Sbjct: 186 ESLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLNLLLNEVV 245
Query: 326 EKCMKVKK 333
E + K
Sbjct: 246 ENVEQFSK 253
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 204 GPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
P + LEK + GP R ++++FG NFG+TCY NS++Q LY+ PFR++V+ + A+
Sbjct: 30 APEPTPLEKLLVNAGPVRADGSDKFFGFENFGSTCYCNSIVQCLYYSVPFREQVINFPAR 89
Query: 261 NKKNK-ETLLSCLADLFHNIA 280
+ E S L L N+A
Sbjct: 90 SPPEALERPSSSLPRLNTNLA 110
>gi|451849727|gb|EMD63030.1| hypothetical protein COCSADRAFT_191282 [Cochliobolus sativus
ND90Pr]
Length = 745
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 8/149 (5%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI----LSERPQSNA----KSKLSAPD 114
+LE+ ++ F M QDAHEFLN L+N + E + S ++N S +++ +
Sbjct: 214 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENVEQFSKSRAAEANTIEENGSTIASGE 273
Query: 115 GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
N S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 274 VVPAQNSVVSAKPNSGWVHELFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTS 333
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 334 CLRKFSEEEMLCERNKFHCDNCGGLQEAE 362
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN L+N +
Sbjct: 186 ESLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLNLLLNEVV 245
Query: 326 EKCMKVKK 333
E + K
Sbjct: 246 ENVEQFSK 253
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
++ P + LEK + GP R ++++FG NFG+TCY NS++Q LY+ PFR++V+
Sbjct: 26 KDTNAPEPTPLEKLLVNAGPVRADGSDKFFGFENFGSTCYCNSIVQCLYYSVPFREQVIN 85
Query: 257 YKAKNKKNK-ETLLSCLADLFHNIA 280
+ A++ E S L L N+A
Sbjct: 86 FPARSPPEALERPSSSLPRLNTNLA 110
>gi|303282773|ref|XP_003060678.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458149|gb|EEH55447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 376
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/124 (58%), Positives = 91/124 (73%), Gaps = 2/124 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-NK 262
G + + LEK D P ERYFGL NFGNTCY+NSVLQALYFC+PFRDRVL Y A+ K
Sbjct: 2 GNSANKLEKAFAGD-IPDGERYFGLENFGNTCYANSVLQALYFCQPFRDRVLRYHAELAK 60
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
++E LL+CL +LF +IA KK+ G APKKFI RL+K+ + F ++M QDAHEFLN+++N
Sbjct: 61 DHEENLLTCLGELFASIAGQKKRTGVFAPKKFIARLKKDNELFRSFMHQDAHEFLNYVLN 120
Query: 323 HINE 326
E
Sbjct: 121 ECVE 124
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDD-AVNPDRMYNL 385
K M VK P +LA+HLKRFKY++ + RH K+ HRVVFP EL+L ++ DD PD Y L
Sbjct: 221 KRMLVKTAPPVLAMHLKRFKYIESLGRHKKLMHRVVFPDELKLNNMEDDLPGTPDAAYGL 280
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS-SETG 444
AVV+H GSGPN GHY+ +VKSH WL +DDD V D S +++ FG T +H S +E G
Sbjct: 281 FAVVVHVGSGPNHGHYVCLVKSHGQWLTYDDDDVQLADASALQNVFGSTREHGGSNTEHG 340
Query: 445 YILFYQSRD 453
YILFY D
Sbjct: 341 YILFYARED 349
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 118/233 (50%), Gaps = 44/233 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCKEKE--DRIEKSQPFWEQT-SLQDKISL 56
G + + LEK D P ERYFGL N G TC + QPF ++ +++
Sbjct: 2 GNSANKLEKAFAGD-IPDGERYFGLENFGNTCYANSVLQALYFCQPFRDRVLRYHAELAK 60
Query: 57 GWECSLILEL-DLCSS------------------------DEFDNYMQQDAHEFLNFLIN 91
E +L+ L +L +S + F ++M QDAHEFLN+++N
Sbjct: 61 DHEENLLTCLGELFASIAGQKKRTGVFAPKKFIARLKKDNELFRSFMHQDAHEFLNYVLN 120
Query: 92 HINEVILSE-RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
E++ E R + SAP TW+H+IFQG LT++T+CL CE
Sbjct: 121 ECVEILEKEHRAAHPTPAGASAP-------------PITTWIHDIFQGQLTNQTRCLWCE 167
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
V+S+ E F DL +D++QN S+T CLR FSS ETL S +KF+CD C QEA
Sbjct: 168 NVTSRKEAFLDLSLDVEQNASVTSCLRTFSSNETLDSADKFQCDACGGLQEAH 220
>gi|67526259|ref|XP_661191.1| hypothetical protein AN3587.2 [Aspergillus nidulans FGSC A4]
gi|74630656|sp|Q96V54.1|CREB_EMENI RecName: Full=Ubiquitin carboxyl-terminal hydrolase creB; AltName:
Full=Carbon catabolite repression protein B; AltName:
Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|15637187|gb|AAL04454.1| CREB [Emericella nidulans]
gi|40740605|gb|EAA59795.1| hypothetical protein AN3587.2 [Aspergillus nidulans FGSC A4]
gi|259481888|tpe|CBF75829.1| TPA: Ubiquitin carboxyl-terminal hydrolase (EC 3.1.2.15)
[Source:UniProtKB/TrEMBL;Acc:Q96V54] [Aspergillus
nidulans FGSC A4]
Length = 766
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 343 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 402
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 403 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 458
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 459 YVLFYQ 464
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 13/138 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F M QDAHEFLN L+N + +++ S +P S+ + G +++
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVVDVEKAAAKLLESPQPASDVSDSVIPSSSSGSRTPNTT- 269
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETL 185
WVHE+F+G+LTSET+CL CE S +DE F DL VD++Q++S+T CLR FS+ E L
Sbjct: 270 ----RWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEML 325
Query: 186 CSDNKFKCDNCASYQEAQ 203
C NKF CDNC QEA+
Sbjct: 326 CERNKFHCDNCGGLQEAE 343
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q ++ LEK E+GP R +++++G+ NFGNTCY NS+LQ LY+ PFR+ VL
Sbjct: 26 KEPQPLPMTPLEKMLTELGPIRGDGSDKFYGMENFGNTCYCNSILQCLYYSVPFREAVLN 85
Query: 257 YKAKN 261
Y +
Sbjct: 86 YPKRT 90
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L S L D+F +I + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFSSLKDMFESIVGSQSRIGIIRPQHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEV 230
>gi|225682518|gb|EEH20802.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
brasiliensis Pb03]
Length = 765
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 305 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 364
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 365 YAVVVHIGGGPYHGHYVAIIKTEDMGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 420
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 421 YVLFYQ 426
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F M QDAHEFLN L+N + + +E +S + G H+++ T
Sbjct: 161 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRSPPPEVDQQSESGEASEHATTTGSVATTLT 220
Query: 131 ------------WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
WVHE+F+G LTSET+CL CE VS +DE F DL VD+ Q++S+T CLR
Sbjct: 221 ASNASKSPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLDQHSSVTSCLRK 280
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 281 FSEEEMLCERNKFHCDNCGGLQEAE 305
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F + ++++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 121 QESLFTSLKDIFEAVVATQERIGVIRPFSFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 180
>gi|169602479|ref|XP_001794661.1| hypothetical protein SNOG_04241 [Phaeosphaeria nodorum SN15]
gi|160706178|gb|EAT88001.2| hypothetical protein SNOG_04241 [Phaeosphaeria nodorum SN15]
Length = 733
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 365 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 424
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 425 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GEGVLACA 480
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 481 YVLFYQ 486
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/155 (44%), Positives = 90/155 (58%), Gaps = 19/155 (12%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI----------LSE-RPQSNAKSKLS 111
+LE+ ++ F M QDAHEFLN L+N + E + +SE +P N S S
Sbjct: 216 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENVEQFSKSRVTEVSESQPTENGLSVTS 275
Query: 112 A---PDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
PD + +SG WVHE+F+G LTSET+CL CE S +DE F DL VD++Q
Sbjct: 276 GAVVPDRSSTVSQINSG-----WVHELFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQ 330
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
++S+T CLR FS E LC NKF CDNC QEA+
Sbjct: 331 HSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 365
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN L+N +
Sbjct: 188 ESLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLNLLLNEVV 247
Query: 326 EKCMKVKK 333
E + K
Sbjct: 248 ENVEQFSK 255
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 215 GPDRFPPNERYFGLVNFG--NTC-----YSNSVLQALYFCKPFRDRVLEYKAKN 261
GP R ++++FG N N C Y NS++Q LY+ PFRD+V+ + A++
Sbjct: 38 GPLRGDGSDKFFGFENVSARNDCSSADSYCNSIVQCLYYSVPFRDQVINFPARS 91
>gi|90085631|dbj|BAE91556.1| unnamed protein product [Macaca fascicularis]
Length = 170
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
MQQDAHEFLN+L+N I +++ E+ Q KL G + + + E TWVHEIFQ
Sbjct: 1 MQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQ 57
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G LT+ET+CLN ETVSSKDED DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C
Sbjct: 58 GTLTNETRCLNRETVSSKDEDLLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCC 117
Query: 198 SYQEAQ 203
S QEAQ
Sbjct: 118 SKQEAQ 123
>gi|226289925|gb|EEH45409.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
brasiliensis Pb18]
Length = 832
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 361 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 420
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 421 YAVVVHIGGGPYHGHYVAIIKTEDMGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 476
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 477 YVLFYQ 482
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/145 (42%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F M QDAHEFLN L+N + + +E +S + G H+++ T
Sbjct: 217 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRSPPPEVDQQSESGEASEHATTTGSVATTLT 276
Query: 131 ------------WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
WVHE+F+G LTSET+CL CE VS +DE F DL VD+ Q++S+T CLR
Sbjct: 277 ASNASKSPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLDQHSSVTSCLRK 336
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 337 FSEEEMLCERNKFHCDNCGGLQEAE 361
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F + ++++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 177 QESLFTSLKDIFEAVVATQERIGVIRPFSFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 236
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 207 ISALEK---EIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
++ LEK + GP R ++++FG+ N +GNTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 35 LTPLEKMLQDAGPLRNDGSDKFFGMENAQYGNTCYCNSILQCLYYSVPFRESVINYPRRS 94
Query: 262 KKNKETLLSCLADLFH 277
ETL LA H
Sbjct: 95 P--IETLNDSLAKNLH 108
>gi|317025538|ref|XP_001389270.2| ubiquitin carboxyl-terminal hydrolase creB [Aspergillus niger CBS
513.88]
gi|300681004|sp|A2Q9N1.2|CREB_ASPNC RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 758
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F + M QDAHEFLN ++N + + +E + S A SSG + P
Sbjct: 213 FRSAMHQDAHEFLNLVLNEVVANVEAEAMKQPIPSLPPADTTDSSRQSISSGSKTPNTTR 272
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC NK
Sbjct: 273 WVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNK 332
Query: 191 FKCDNCASYQEAQ 203
F CDNC QEA+
Sbjct: 333 FHCDNCGGLQEAE 345
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P+ F+ LR+E + F + M QDAHEFLN ++N +
Sbjct: 174 ESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLNEV 232
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 207 ISALEK---EIGPD--RFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
I+ LEK E+G D R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ VL Y +
Sbjct: 33 ITPLEKMLQEMGSDSVRQDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVLNYPTRT 92
Query: 262 KKNKETLLSCLA 273
E+L + LA
Sbjct: 93 P--IESLEAALA 102
>gi|327348777|gb|EGE77634.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis ATCC
18188]
Length = 858
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/166 (44%), Positives = 105/166 (63%), Gaps = 25/166 (15%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 360 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 420 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 475
Query: 445 YILFYQ-------------------SRDSTDARTM-NSNDCRVNGS 470
Y+LFYQ +R S D R + +++ R+NGS
Sbjct: 476 YVLFYQETTFEAMQKEQEKEGMTPENRASVDTRDLVSASQSRMNGS 521
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG---------------G 118
F M QDAHEFLN L+N + + +E +S + G
Sbjct: 216 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRSPPPELDQQSENGEMSVNTTTTGSVATTLA 275
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+++S WVHE+F+G LTSET+CL CE +S +DE F DL VD+ Q++S+T CLR
Sbjct: 276 TSNTSKSPNTTRWVHELFEGTLTSETQCLTCENISQRDEVFLDLSVDLDQHSSVTSCLRK 335
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 336 FSEEEMLCERNKFHCDNCGGLQEAE 360
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F I ++++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 176 QESLFTSLKDIFEAIVASQERMGVIRPYTFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 235
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 207 ISALEK---EIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
++ LEK + GP R ++++FG+ N +GNTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 33 MTPLEKMLQDAGPLRNDGSDKFFGMENAQYGNTCYCNSILQCLYYSVPFRESVINYPRRS 92
Query: 262 KKNKETLLSCLA 273
E+L CLA
Sbjct: 93 P--IESLNECLA 102
>gi|396472217|ref|XP_003839053.1| hypothetical protein LEMA_P027260.1 [Leptosphaeria maculans JN3]
gi|312215622|emb|CBX95574.1| hypothetical protein LEMA_P027260.1 [Leptosphaeria maculans JN3]
Length = 758
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 88/149 (59%), Gaps = 9/149 (6%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI---LSERPQSNAKSKLSAPDGGGGD 119
+LE+ ++ F M QDAHEFLN L+N + E + R N++S+ + G+
Sbjct: 215 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENVEHYSKNRIMDNSESEANGTTTTSGE 274
Query: 120 NHSSSGFEEPT-----WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
+ PT WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 275 V-VARDTPAPTKVNSGWVHELFEGTLTSETRCLTCENTSQRDEIFLDLSVDLEQHSSVTS 333
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 334 CLRKFSEEEMLCERNKFHCDNCGGLQEAE 362
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K++L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN L+N +
Sbjct: 186 KDSLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLNLLLNEV 245
Query: 325 NE 326
E
Sbjct: 246 VE 247
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
++ P + LEK + GP R ++++FG NFG+TCY NS++Q LY+ PFR++V+
Sbjct: 26 KDPNAPEPTPLEKLLANAGPLRTDGSDKFFGFENFGSTCYCNSIVQCLYYSAPFREQVIN 85
Query: 257 YKAKN 261
+ A++
Sbjct: 86 FPARS 90
>gi|358365313|dbj|GAA81935.1| carbon catabolite repression protein B [Aspergillus kawachii IFO
4308]
Length = 747
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 333 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 392
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 393 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 448
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 449 YVLFYQ 454
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F + M QDAHEFLN ++N + + +E + S A SSG + P
Sbjct: 201 FRSAMHQDAHEFLNLVLNEVVANVEAEAMKQPIPSLPPADTTDSSRQSISSGSKTPNTTR 260
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC NK
Sbjct: 261 WVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNK 320
Query: 191 FKCDNCASYQEAQ 203
F CDNC QEA+
Sbjct: 321 FHCDNCGGLQEAE 333
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P+ F+ LR+E + F + M QDAHEFLN ++N +
Sbjct: 162 ESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLNEV 220
>gi|134055383|emb|CAK43937.1| unnamed protein product [Aspergillus niger]
Length = 774
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 361 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 420
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 421 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 476
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 477 YVLFYQ 482
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F + M QDAHEFLN ++N + + +E + S A SSG + P
Sbjct: 229 FRSAMHQDAHEFLNLVLNEVVANVEAEAMKQPIPSLPPADTTDSSRQSISSGSKTPNTTR 288
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC NK
Sbjct: 289 WVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNK 348
Query: 191 FKCDNCASYQEAQ 203
F CDNC QEA+
Sbjct: 349 FHCDNCGGLQEAE 361
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P+ F+ LR+E + F + M QDAHEFLN ++N +
Sbjct: 190 ESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLNEV 248
>gi|350638345|gb|EHA26701.1| ubiquitin-specific protease [Aspergillus niger ATCC 1015]
Length = 708
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 295 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 354
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 355 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 410
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 411 YVLFYQ 416
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F + M QDAHEFLN ++N + + +E + S A SSG + P
Sbjct: 163 FRSAMHQDAHEFLNLVLNEVVANVEAEAMKQPIPSLPPADTTDSSRQSISSGSKTPNTTR 222
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC NK
Sbjct: 223 WVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNK 282
Query: 191 FKCDNCASYQEAQ 203
F CDNC QEA+
Sbjct: 283 FHCDNCGGLQEAE 295
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P+ F+ LR+E + F + M QDAHEFLN ++N +
Sbjct: 124 ESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLNEV 182
>gi|258573855|ref|XP_002541109.1| CREB protein [Uncinocarpus reesii 1704]
gi|237901375|gb|EEP75776.1| CREB protein [Uncinocarpus reesii 1704]
Length = 738
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 94/126 (74%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY ++++R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 317 EKRMKIKRLPKVLALHLKRFKYSEELDRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 376
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG + +
Sbjct: 377 YAVVVHIGGGPYHGHYVAIIKTVDRGWLLFDDEMVEPVDKSFVRNFFG----DRPGLGSA 432
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 433 YVLFYQ 438
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 7/137 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF------- 126
F M QDAHEFLN L+N + + + + S+A + +G + S
Sbjct: 181 FRTTMHQDAHEFLNLLLNEVVSNVEAAQLLSDADEESDDSEGASERTATDSSVSTVPSKS 240
Query: 127 EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC 186
+ WVHE+F+G LTSET+CL CETVS +DE F DL VD++Q++S+T CLR FS E LC
Sbjct: 241 QNTRWVHELFEGTLTSETQCLTCETVSQRDEVFLDLSVDLEQHSSVTACLRKFSEEEVLC 300
Query: 187 SDNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 301 ERNKFHCDNCGGLQEAE 317
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE+L + L D+F +A +++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 141 KESLFTSLKDMFEAVAASPERMGVIRPYHFLEVLRREHEMFRTTMHQDAHEFLNLLLNEV 200
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
Query: 212 KEIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
++ GP R ++++FG+ N FGNTCY NS+LQ L++ PFR+ V+ Y ++ L
Sbjct: 3 QDAGPLRNDGSDKFFGMENAQFGNTCYCNSILQCLFYSVPFRESVINYPRRSPPG--VLT 60
Query: 270 SCLADLFH 277
LA+ H
Sbjct: 61 DALANNLH 68
>gi|320036754|gb|EFW18692.1| ubiquitin carboxyl-terminal hydrolase 2 [Coccidioides posadasii
str. Silveira]
Length = 786
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 94/126 (74%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ MK+K+LP ILALHLKRFKY + ++R K+ HRV +P LRLF+ +DDA +PDR+Y L
Sbjct: 357 ERRMKIKRLPKILALHLKRFKYSEDLDRLQKLFHRVTYPYYLRLFNTTDDAEDPDRLYEL 416
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S +++FFG + + +
Sbjct: 417 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSFVQNFFG----DRPTLTSA 472
Query: 445 YILFYQ 450
YILFYQ
Sbjct: 473 YILFYQ 478
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 18/147 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSN--------AKSKLSAPDGGGGD 119
F M QDAHEFLN L+N + + V+LS+ + + S+ +A DG
Sbjct: 212 FRTTMHQDAHEFLNLLLNQVVSNVEDDAVLLSDADEQSDNSEETSEGTSEETATDGSVS- 270
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
S+G + WVH++F+G LTSET+CL CETVS +DE F DL VD+++++S+T CL
Sbjct: 271 TLPSNGVKSSRNTRWVHQLFEGTLTSETQCLTCETVSQRDEVFLDLSVDLEEHSSVTACL 330
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS E LC NKF CDNC QEA+
Sbjct: 331 RKFSEEEVLCERNKFHCDNCGGLQEAE 357
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE+L + L DLF + ++VG I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 KESLFTSLKDLFEAVIASPERVGVIRPYHFLEILRREHEMFRTTMHQDAHEFLNLLLNQV 231
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 213 EIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ GP R ++++FG+ N FGNTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 42 DAGPVRDDGSDKFFGMENAQFGNTCYCNSILQCLYYSVPFRESVINYPRRS 92
>gi|315056421|ref|XP_003177585.1| ubiquitin carboxyl-terminal hydrolase 13 [Arthroderma gypseum CBS
118893]
gi|311339431|gb|EFQ98633.1| ubiquitin carboxyl-terminal hydrolase 13 [Arthroderma gypseum CBS
118893]
Length = 876
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPRILALHLKRFKYTEDQQKLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSYVRNFFG----DKPGQACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 81/147 (55%), Gaps = 21/147 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNA-----------------KSKLSAPDGG 116
F M QDAHEFLN L+N + + +E +++ + L+ GG
Sbjct: 220 FRTAMHQDAHEFLNLLLNEVVNNVEAEANRTSVLEADADSESSTATSASVATTLATSVGG 279
Query: 117 GGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
G S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T CL
Sbjct: 280 GSAKTPYST----RWVHELFEGKLTSETECLTCEKKSQRDEAFLDLSVDLEQHSSVTSCL 335
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS E LC NKF CDNC QEA+
Sbjct: 336 RKFSQEEMLCERNKFHCDNCGGLQEAE 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
++N +E+L + L D+F +IA +++VG + P+ F+ LR+E + F M QDAHEFLN
Sbjct: 174 SQNYGMQESLFTSLKDIFESIAASEERVGVVRPQHFLDVLRRENEMFRTAMHQDAHEFLN 233
Query: 319 FLINHI 324
L+N +
Sbjct: 234 LLLNEV 239
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 207 ISALEKEIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ L + GP + ++++FG+ N F NTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 37 LQKLLSDAGPLKSDGSDKFFGMENAPFANTCYCNSILQCLYYSAPFRESVINYPQRS 93
>gi|115389692|ref|XP_001212351.1| ubiquitin carboxyl-terminal hydrolase 12 [Aspergillus terreus
NIH2624]
gi|114194747|gb|EAU36447.1| ubiquitin carboxyl-terminal hydrolase 12 [Aspergillus terreus
NIH2624]
Length = 757
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 334 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 393
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 394 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 449
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 450 YVLFYQ 455
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER-PQSNAKSKLSAPDGGGGDNHS-SSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + + L + HS SSG + P
Sbjct: 200 FRTAMHQDAHEFLNLLLNEVVANVEAEALKQPSLERSLPPAESSESVEHSGSSGSKTPNT 259
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 260 TRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 319
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 320 NKFHCDNCGGLQEAE 334
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G + P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 161 ESLFTSLKDLFESVVGSQSRIGIVRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 219
>gi|119192482|ref|XP_001246847.1| hypothetical protein CIMG_00618 [Coccidioides immitis RS]
gi|392863911|gb|EAS35310.2| ubiquitin carboxyl-terminal hydrolase 12 [Coccidioides immitis RS]
Length = 786
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 94/126 (74%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ MK+K+LP ILALHLKRFKY + ++R K+ HRV +P LRLF+ +DDA +PDR+Y L
Sbjct: 357 ERRMKIKRLPKILALHLKRFKYSEDLDRLQKLFHRVTYPYYLRLFNTTDDAEDPDRLYEL 416
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S +++FFG + + +
Sbjct: 417 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSFVQNFFG----DRPTLTSA 472
Query: 445 YILFYQ 450
YILFYQ
Sbjct: 473 YILFYQ 478
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 18/147 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSN--------AKSKLSAPDGGGGD 119
F M QDAHEFLN L+N + + V+LS+ + + S+ +A DG
Sbjct: 212 FRTTMHQDAHEFLNLLLNQVVSNVEDDAVLLSDADEQSDNSEETSEGTSEETATDGSVS- 270
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
S+G + WVH++F+G LTSET+CL CETVS +DE F DL VD+++++S+T CL
Sbjct: 271 TLPSNGVKSSRNTRWVHQLFEGTLTSETQCLTCETVSQRDEVFLDLSVDLEEHSSVTACL 330
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS E LC NKF CDNC QEA+
Sbjct: 331 RKFSEEEVLCERNKFHCDNCGGLQEAE 357
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE+L + L DLF + ++VG I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 KESLFTSLKDLFEAVIASPERVGVIRPYHFLEILRREHEMFRTTMHQDAHEFLNLLLNQV 231
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 205 PNISALEK---EIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
P ++ L+K + GP R ++++FG+ N FGNTCY NS+LQ LY+ PFR+ V+ Y
Sbjct: 31 PPLTPLQKMLLDAGPVRDDGSDKFFGMENAQFGNTCYCNSILQCLYYSVPFRESVINYPR 90
Query: 260 KN 261
++
Sbjct: 91 RS 92
>gi|300681006|sp|Q0CT11.2|CREB_ASPTN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 768
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER-PQSNAKSKLSAPDGGGGDNHS-SSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + + L + HS SSG + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEALKQPSLERSLPPAESSESVEHSGSSGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G + P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDLFESVVGSQSRIGIVRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 212 KEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC 271
+++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+ Y + E+L +
Sbjct: 41 QDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRTP--IESLTAA 98
Query: 272 LADLF 276
LA+
Sbjct: 99 LAETL 103
>gi|146323881|ref|XP_751541.2| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus Af293]
gi|129557489|gb|EAL89503.2| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus Af293]
Length = 775
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERP-QSNAKSKLSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + L AP+ D SS+G + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N Y NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENVRWLSYCNSILQCLYYSVPFREAVIN 85
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 86 YPTRTP--IESLEAALA 100
>gi|390604838|gb|EIN14229.1| cysteine proteinase, partial [Punctularia strigosozonata HHB-11173
SS5]
Length = 421
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 95/130 (73%), Gaps = 10/130 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + R++K+++RV FPLELRLF+ DDA +PDR+Y L
Sbjct: 297 EKRMKIKRLPNVLALHLKRFKYQEDVGRYIKLAYRVAFPLELRLFNTVDDAQDPDRLYKL 356
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-----WLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
A+V+H G+GP+ GHYI+IVK+ + WL+FDDD VD I +S I ++G +
Sbjct: 357 FAIVVHIGNGPHHGHYITIVKAANPNAPGQWLVFDDDNVDTIKESDIPKYYG-----DSN 411
Query: 441 SETGYILFYQ 450
S + Y+LFYQ
Sbjct: 412 SGSAYVLFYQ 421
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 12/148 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS-SSGFEEP--- 129
F + M QDAHEFLN+++N I + + ER + NA K+S + S+ + P
Sbjct: 165 FRSTMHQDAHEFLNYVLNKIVDELEEER-KRNADGKVSNSVATLATTRAPSTSYSLPSAS 223
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
T VH +F+G LTSET+CL CETVSS+DE F DL VDI+QN+SIT CLR FS++E LC N
Sbjct: 224 TLVHRLFEGTLTSETRCLTCETVSSRDESFLDLSVDIEQNSSITACLRQFSASEMLCQRN 283
Query: 190 KFKCDNCASYQEAQG-------PNISAL 210
KF CD+C QEA+ PN+ AL
Sbjct: 284 KFFCDSCCDLQEAEKRMKIKRLPNVLAL 311
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 50/160 (31%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE----------------------YKAKN 261
+ FGL NFGNTCY+NSVLQALYFC P RD V++ + ++
Sbjct: 34 KQFGLENFGNTCYANSVLQALYFCSPLRDLVIQSPDSAAGHEDPASFLPSPTVLGQQVRH 93
Query: 262 KKNKE----------------------------TLLSCLADLFHNIATHKKKVGSIAPKK 293
K +++ TL S L LF +IA + + G++AP+
Sbjct: 94 KPDRKPSATHTPSRPADPTASQLTASSSGSTSATLFSALRALFLHIAQNPQDKGTVAPRA 153
Query: 294 FITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
FI +LR+ + F + M QDAHEFLN+++N I ++ + +K
Sbjct: 154 FIEKLRELNELFRSTMHQDAHEFLNYVLNKIVDELEEERK 193
>gi|300681027|sp|Q4WQI1.3|CREB_ASPFU RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 775
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERP-QSNAKSKLSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + L AP+ D SS+G + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 85
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 86 YPTRTP--IESLEAALA 100
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
>gi|300680898|sp|B0Y4P5.1|CREB_ASPFC RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|159125527|gb|EDP50644.1| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus A1163]
Length = 767
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 339 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 398
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 399 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 454
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 455 YVLFYQ 460
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE-RPQSNAKSKLSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + L AP+ D SS+G + P
Sbjct: 205 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNT 264
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 265 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 324
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 325 NKFHCDNCGGLQEAE 339
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 20 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 79
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 80 YPTRTP--IESLEAALA 94
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 166 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 224
>gi|225558998|gb|EEH07281.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus G186AR]
Length = 770
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 284 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 343
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 344 YAVVVHIGGGPYHGHYVAIIKTEDMGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 399
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 400 YVLFYQ 405
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG---------------G 118
F M QDAHEFLN L+N + + +E +S + G
Sbjct: 140 FRTAMHQDAHEFLNLLLNEVVANVEAEAERSLPPEIDQQSESGELSTNTTTTGSVATTLT 199
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
++++S WVHE+F+G LTSET+CL CE VS +DE F DL VD+ Q++S+T CLR
Sbjct: 200 NSNTSKSPNNTRWVHELFEGTLTSETQCLTCENVSQRDEVFLDLSVDLDQHSSVTSCLRK 259
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 260 FSEEEMLCERNKFHCDNCGGLQEAE 284
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
RD + Y + E+L + L D+F I ++++G I P F+ LR+E + F M
Sbjct: 91 RDNAMSYGMQ-----ESLFTSLKDIFEAIVATQERMGVIRPYSFLEVLRREHEMFRTAMH 145
Query: 311 QDAHEFLNFLINHI 324
QDAHEFLN L+N +
Sbjct: 146 QDAHEFLNLLLNEV 159
>gi|330921681|ref|XP_003299523.1| hypothetical protein PTT_10531 [Pyrenophora teres f. teres 0-1]
gi|311326748|gb|EFQ92362.1| hypothetical protein PTT_10531 [Pyrenophora teres f. teres 0-1]
Length = 764
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 362 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 422 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/151 (44%), Positives = 90/151 (59%), Gaps = 12/151 (7%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG----- 117
+LE+ ++ F M QDAHEFLN L+N + E + E+ N +++ A + G
Sbjct: 214 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENV--EQFSKNRVTEVDATEENGATTAS 271
Query: 118 GD-----NHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSI 172
GD N + S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+
Sbjct: 272 GDVVPVRNSAVSAKSNTGWVHELFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSV 331
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T CLR FS E LC NKF CDNC QEA+
Sbjct: 332 TSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 362
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
AK+ E+L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN
Sbjct: 179 AKSYGMNESLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLN 238
Query: 319 FLINHINEKCMKVKK 333
L+N + E + K
Sbjct: 239 LLLNEVVENVEQFSK 253
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
++ P + LEK + GP R ++++FG NFG+TCY NS++Q LY+ PFR++V+
Sbjct: 26 KDPNAPEATPLEKLLLNAGPVRSDGSDKFFGFENFGSTCYCNSIVQCLYYSVPFREQVIN 85
Query: 257 YKAKN 261
+ A++
Sbjct: 86 FPARS 90
>gi|159476648|ref|XP_001696423.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282648|gb|EDP08400.1| predicted protein [Chlamydomonas reinhardtii]
Length = 350
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 90/120 (75%), Gaps = 3/120 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LEK + P +ERY+GL NFGNTCY NSVLQALYFCKPFR+R+L+Y A
Sbjct: 2 GANSSKLEKALAEA--PEDERYYGLENFGNTCYCNSVLQALYFCKPFRERLLKYGASLPG 59
Query: 264 N-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
N +E LL+CLADLF I + KKKVG I+PKKF+ RL+++ + F +M QDAHEFLN+L+N
Sbjct: 60 NVEENLLNCLADLFTQINSSKKKVGVISPKKFVQRLKRDNELFRGHMHQDAHEFLNYLLN 119
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHL-SDDAVNPDRMYN 384
+K M ++ +P L LHLKRFKY++ R K+ +RVVFP+EL+L + SDD PD +Y+
Sbjct: 221 KKRMLLRSVPPCLILHLKRFKYVEAQGRMRKLMYRVVFPMELKLANTTSDDPAAPDTLYS 280
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-QKSSET 443
L AVV+H GSGP+ GHY+S++KS W+ FDD+ V+ I +S ++ FG TSD+ Q + +
Sbjct: 281 LTAVVVHVGSGPHHGHYVSLIKSGSQWMFFDDETVELITESQVQSTFGSTSDYGQNNMDH 340
Query: 444 GYILFYQ 450
GYILFY+
Sbjct: 341 GYILFYE 347
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 115/233 (49%), Gaps = 43/233 (18%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N S LEK + P +ERY+GL N G TC +E+ + S P
Sbjct: 2 GANSSKLEKALAEA--PEDERYYGLENFGNTCYCNSVLQALYFCKPFRERLLKYGASLPG 59
Query: 44 -------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
F + S + K+ + + L ++ F +M QDAHEFLN+L+
Sbjct: 60 NVEENLLNCLADLFTQINSSKKKVGVISPKKFVQRLKR-DNELFRGHMHQDAHEFLNYLL 118
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCE 150
N E++ E + S TWVH+IFQG L +ET+CL+CE
Sbjct: 119 NCSCELLEQEAKAAGGGGGGGG----------GSSQPITTWVHDIFQGKLVNETRCLHCE 168
Query: 151 TVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
TV+S++E F DL ++I QNTS+T CLR FSS E L D+KF CD+C QEA+
Sbjct: 169 TVTSREEVFMDLSLEIDQNTSVTSCLRNFSSMEMLDRDDKFFCDHCCCLQEAK 221
>gi|239611216|gb|EEQ88203.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis ER-3]
Length = 786
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 288 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 347
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 348 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 403
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 404 YVLFYQ 409
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG---------------G 118
F M QDAHEFLN L+N + + +E +S + G
Sbjct: 144 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRSPPPELDQQSENGEMSVNTTTTGSVATTLA 203
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+++S WVHE+F+G LTSET+CL CE +S +DE F DL VD+ Q++S+T CLR
Sbjct: 204 TSNTSKSPNTTRWVHELFEGTLTSETQCLTCENISQRDEVFLDLSVDLDQHSSVTSCLRK 263
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 264 FSEEEMLCERNKFHCDNCGGLQEAE 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 25/137 (18%)
Query: 207 ISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
++ LEK + GP R ++++FG+ N G T A KP EYK K
Sbjct: 33 MTPLEKMLQDAGPLRNDGSDKFFGMENGGATP------PAQQPPKPEDKDSPEYKKKVAM 86
Query: 264 NK----------------ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDN 307
++ E+L + L D+F I ++++G I P F+ LR+E + F
Sbjct: 87 HRLPILETTDNATSYGMQESLFTSLKDIFEAIVASQERMGVIRPYTFLEVLRREHEMFRT 146
Query: 308 YMQQDAHEFLNFLINHI 324
M QDAHEFLN L+N +
Sbjct: 147 AMHQDAHEFLNLLLNEV 163
>gi|189203173|ref|XP_001937922.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985021|gb|EDU50509.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 705
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 308 EKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 367
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 368 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 423
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 424 YVLFYQ 429
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 86/149 (57%), Gaps = 8/149 (5%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI---LSERPQSNAKSKLSAPDGGGGD 119
+LE+ ++ F M QDAHEFLN L+N + E + +R ++ + GD
Sbjct: 160 LLEILRRDNEMFRTPMHQDAHEFLNLLLNEVVENVEQFSKDRITEVDATQENGTTAASGD 219
Query: 120 -----NHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
N + S WVHE+F+G LTSET+CL CE S +DE F DL VD++Q++S+T
Sbjct: 220 VVPFRNSAVSAKSNTGWVHELFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTS 279
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLR FS E LC NKF CDNC QEA+
Sbjct: 280 CLRKFSEEEMLCERNKFHCDNCGGLQEAE 308
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
AK+ E+L S L D+F + H+ ++G ++P K + LR++ + F M QDAHEFLN
Sbjct: 125 AKSYGMNESLFSSLKDIFEAVIAHRSRIGVVSPHKLLEILRRDNEMFRTPMHQDAHEFLN 184
Query: 319 FLINHINEKCMKVKK 333
L+N + E + K
Sbjct: 185 LLLNEVVENVEQFSK 199
>gi|300681001|sp|A1CW53.2|CREB_NEOFI RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 761
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSK-LSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E + K L AP+ D SS+G + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 85
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 86 YPTRTP--IESLEAALA 100
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
>gi|302852262|ref|XP_002957652.1| hypothetical protein VOLCADRAFT_68392 [Volvox carteri f.
nagariensis]
gi|300257064|gb|EFJ41318.1| hypothetical protein VOLCADRAFT_68392 [Volvox carteri f.
nagariensis]
Length = 364
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N + LEK + P +ERY+GL NFGNTCY NSVLQALYFCKPFR+R+L+Y A
Sbjct: 2 GANSTKLEKALAEA--PEDERYYGLENFGNTCYCNSVLQALYFCKPFRERLLKYAATLPS 59
Query: 264 N-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
N +E LL+CLA+LF I + KKKVG ++PKKF+TRL+++ + F +M QDAHEFLN+L+N
Sbjct: 60 NTEENLLNCLAELFAQINSSKKKVGVVSPKKFVTRLKRDNEVFRGHMHQDAHEFLNYLLN 119
Query: 323 H 323
Sbjct: 120 Q 120
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 125/237 (52%), Gaps = 38/237 (16%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRIEK------- 40
G N + LEK + P +ERY+GL N G TC K +R+ K
Sbjct: 2 GANSTKLEKALAEA--PEDERYYGLENFGNTCYCNSVLQALYFCKPFRERLLKYAATLPS 59
Query: 41 ----------SQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLI 90
++ F + S + K+ + + L ++ F +M QDAHEFLN+L+
Sbjct: 60 NTEENLLNCLAELFAQINSSKKKVGVVSPKKFVTRLKR-DNEVFRGHMHQDAHEFLNYLL 118
Query: 91 NHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF--EEP--TWVHEIFQGILTSETKC 146
N E +L + ++N K + A GGG S EP TWVHEIFQG L +ET+C
Sbjct: 119 NQSCE-LLEQEARANQKQQQLAGGAGGGGGPGSQQGAPREPITTWVHEIFQGKLVNETRC 177
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
L+CETV+ ++E F DL ++I+QNTS+T CLR FSS E L D+KF CD C QEA+
Sbjct: 178 LHCETVTCREEVFMDLSLEIEQNTSLTSCLRNFSSMEMLDRDDKFFCDQCCCLQEAK 234
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 86/127 (67%), Gaps = 2/127 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS-DDAVNPDRMYN 384
+K M ++ P L LHLKRFKY++ R K+ +RVVFP+EL+L + + DD D +Y
Sbjct: 234 KKRMLLRSAPPCLILHLKRFKYVEAQGRLRKLMYRVVFPMELKLSNTTADDPGAADTLYT 293
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-QKSSET 443
L AVV+H GSGP+ GHY+S++KS WL FDD+ V I +S ++ FG TS++ Q + +
Sbjct: 294 LTAVVVHLGSGPHHGHYVSLIKSGPQWLSFDDESVLPITESEVQSTFGSTSEYGQNNMDH 353
Query: 444 GYILFYQ 450
GYILFY+
Sbjct: 354 GYILFYE 360
>gi|119499990|ref|XP_001266752.1| ubiquitin C-terminal hydrolase CreB [Neosartorya fischeri NRRL 181]
gi|119414917|gb|EAW24855.1| ubiquitin C-terminal hydrolase CreB [Neosartorya fischeri NRRL 181]
Length = 729
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 313 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 372
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 373 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 428
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 429 YVLFYQ 434
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSK-LSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E + K L AP+ D SS+G + P
Sbjct: 179 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNT 238
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 239 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 298
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 299 NKFHCDNCGGLQEAE 313
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 140 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 198
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 5/70 (7%)
Query: 207 ISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+ Y +
Sbjct: 1 MTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRTP- 59
Query: 264 NKETLLSCLA 273
E+L + LA
Sbjct: 60 -IESLEAALA 68
>gi|255085010|ref|XP_002504936.1| predicted protein [Micromonas sp. RCC299]
gi|226520205|gb|ACO66194.1| predicted protein [Micromonas sp. RCC299]
Length = 376
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/131 (51%), Positives = 90/131 (68%), Gaps = 1/131 (0%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M VK P +LALHLKRFKY++ + RH K+ HRVVFP EL++ ++++DA D Y L
Sbjct: 220 KRMLVKSSPKVLALHLKRFKYLESLGRHAKLMHRVVFPSELKIPNMTEDADGQDAAYQLF 279
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS-SETGY 445
AVV+H GSGPN GHY+ +VKSH WL +DDD V+ +D + +FFG T +H +E GY
Sbjct: 280 AVVVHVGSGPNHGHYVCLVKSHGQWLTYDDDTVELMDDDAMNNFFGSTQEHSGGNTEHGY 339
Query: 446 ILFYQSRDSTD 456
ILFY+ D +
Sbjct: 340 ILFYERVDGAE 350
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 3/128 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-KAKNK 262
G + L+K + D ERY+GL NFGNTCY+NSVLQALYFCKPFR +LEY ++ K
Sbjct: 2 GNGSTKLDKALLAD--TDGERYYGLENFGNTCYANSVLQALYFCKPFRHAILEYHESLPK 59
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ E+LL+ L DLF +I+ KK+ G +APKKFI RL+K+ F++YM QDAHEF NF++N
Sbjct: 60 DHDESLLTALGDLFASISNQKKRTGVLAPKKFIERLKKDNVIFNSYMHQDAHEFFNFVVN 119
Query: 323 HINEKCMK 330
E +K
Sbjct: 120 ECCEVLVK 127
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 83/134 (61%), Gaps = 20/134 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP---- 129
F++YM QDAHEF NF++N EV++ + + + PDG EE
Sbjct: 102 FNSYMHQDAHEFFNFVVNECCEVLVKQHRREHP-----TPDG-----------EETKPVK 145
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TW+H+IF+G LT++T+CL CE V+S+ E F DL +DI+QN S++ CL+ FSS E L S +
Sbjct: 146 TWIHDIFEGGLTNQTQCLWCENVTSRHEAFMDLSLDIEQNASVSACLKQFSSNELLASQD 205
Query: 190 KFKCDNCASYQEAQ 203
KF+CD C QEA
Sbjct: 206 KFQCDACGGLQEAH 219
>gi|83764653|dbj|BAE54797.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 707
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 297 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 356
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 357 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 412
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 413 YVLFYQ 418
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN---HSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + + S P D+ SSG + P
Sbjct: 163 FRTAMHQDAHEFLNLLLNEVVANVEAEA-SKQPEPERSLPPAESADSTELSGSSGSKTPN 221
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 222 TTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 281
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 282 RNKFHCDNCGGLQEAE 297
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 124 ESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 182
>gi|300681005|sp|Q2UUG8.2|CREB_ASPOR RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 754
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 344 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 403
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 404 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 459
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 460 YVLFYQ 465
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN---HSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + + S P D+ SSG + P
Sbjct: 210 FRTAMHQDAHEFLNLLLNEVVANVEAEA-SKQPEPERSLPPAESADSTELSGSSGSKTPN 268
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 269 TTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 328
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 329 RNKFHCDNCGGLQEAE 344
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 171 ESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 229
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK ++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 25 KEPPVPPVTPLEKMLQDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVVN 84
Query: 257 YKAKNKKNKETLLSCLADLF 276
Y + E+L + LA+
Sbjct: 85 YPTRTP--IESLEAALANTL 102
>gi|238504084|ref|XP_002383274.1| ubiquitin C-terminal hydrolase CreB [Aspergillus flavus NRRL3357]
gi|317138278|ref|XP_001816799.2| ubiquitin carboxyl-terminal hydrolase creB [Aspergillus oryzae
RIB40]
gi|300680899|sp|B8NSV5.1|CREB_ASPFN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|220690745|gb|EED47094.1| ubiquitin C-terminal hydrolase CreB [Aspergillus flavus NRRL3357]
gi|391863176|gb|EIT72488.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
Length = 755
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN---HSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + + S P D+ SSG + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEA-SKQPEPERSLPPAESADSTELSGSSGSKTPN 269
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 270 TTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 329
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 330 RNKFHCDNCGGLQEAE 345
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK ++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPPVPPVTPLEKMLQDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVVN 85
Query: 257 YKAKNKKNKETLLSCLADLF 276
Y + E+L + LA+
Sbjct: 86 YPTRTP--IESLEAALANTL 103
>gi|300681008|sp|A1CIL1.2|CREB_ASPCL RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 760
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 346 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 405
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 406 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKNYVRNFFG----DKPGLACA 461
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 462 YVLFYQ 467
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 66 LDLCSSDE--FDNYMQQDAHEFLNFLINHIN---EVILSERPQSNAKSKLSAPDGGGG-D 119
LD+ D F M QDAHEFLN L+N + E S++P + KS L APD D
Sbjct: 201 LDVLRRDHEMFRTAMHQDAHEFLNLLLNEVVANVEAEASKQPAAIEKS-LPAPDHAETVD 259
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
+SSG + P WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CL
Sbjct: 260 QSASSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQHSSVTSCL 319
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS+ E LC NKF CDNC QEA+
Sbjct: 320 RKFSAEEMLCERNKFHCDNCGGLQEAE 346
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIVRPQQFLDVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 205 PNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
P ++ LEK ++G R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+ Y +
Sbjct: 31 PPMTPLEKRLLDMGSIRGDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRT 90
Query: 262 KKNKETLLSCLA 273
E+L + LA
Sbjct: 91 P--IESLEAALA 100
>gi|121708473|ref|XP_001272142.1| ubiquitin C-terminal hydrolase CreB [Aspergillus clavatus NRRL 1]
gi|119400290|gb|EAW10716.1| ubiquitin C-terminal hydrolase CreB [Aspergillus clavatus NRRL 1]
Length = 772
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 358 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 417
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 418 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKNYVRNFFG----DKPGLACA 473
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 474 YVLFYQ 479
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 66 LDLCSSDE--FDNYMQQDAHEFLNFLINHIN---EVILSERPQSNAKSKLSAPDGGGG-D 119
LD+ D F M QDAHEFLN L+N + E S++P + KS L APD D
Sbjct: 213 LDVLRRDHEMFRTAMHQDAHEFLNLLLNEVVANVEAEASKQPAAIEKS-LPAPDHAETVD 271
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
+SSG + P WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CL
Sbjct: 272 QSASSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQHSSVTSCL 331
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS+ E LC NKF CDNC QEA+
Sbjct: 332 RKFSAEEMLCERNKFHCDNCGGLQEAE 358
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 184 ESLFTSLKDIFESVVGSQSRIGIVRPQQFLDVLRRDHEMFRTAMHQDAHEFLNLLLNEV 242
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK ++G R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 38 KEVPIPPMTPLEKRLLDMGSIRGDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 97
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 98 YPTRTP--IESLEAALA 112
>gi|240281920|gb|EER45423.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus H143]
gi|325088054|gb|EGC41364.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces capsulatus H88]
Length = 770
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 284 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 343
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 344 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 399
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 400 YVLFYQ 405
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/145 (44%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERP------QSNAKSKLSAPDGGGG------- 118
F M QDAHEFLN L+N + N +ER Q + +LS G
Sbjct: 140 FRTAMHQDAHEFLNLLLNEVVANVEAEAERSLPPEIDQQSESGELSTNTTATGSVATTLT 199
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
++++S WVHE+F+G LTSET+CL CE VS +DE F DL VD+ Q++S+T CLR
Sbjct: 200 NSNTSKSPNNTRWVHELFEGTLTSETQCLTCENVSQRDEVFLDLSVDLDQHSSVTSCLRK 259
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 260 FSEEEMLCERNKFHCDNCGGLQEAE 284
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
RD + Y + E+L + L D+F I ++++G I P F+ LR+E + F M
Sbjct: 91 RDNAMSYGMQ-----ESLFTSLKDIFEAIVATQERMGVIRPYSFLEVLRREHEMFRTAMH 145
Query: 311 QDAHEFLNFLINHI 324
QDAHEFLN L+N +
Sbjct: 146 QDAHEFLNLLLNEV 159
>gi|379045587|gb|AFC87622.1| putative ubiquitin carboxyl-terminal hydrolase CreB [Penicillium
decumbens]
Length = 769
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 351 EKRMKIKRLPRVLALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 410
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 411 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKNYVRNFFG----DKPGLACA 466
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 467 YVLFYQ 472
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 83/138 (60%), Gaps = 8/138 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG-----GDNHSSSGFEE 128
F M QDAHEFLN L+N + + +E + K P G ++SG +
Sbjct: 214 FRTAMHQDAHEFLNLLLNEVVANVEAEATKQAFSDKAIPPPPSESAESLGTITNTSGTKS 273
Query: 129 PT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETL 185
P WVHE+F+G LTSETKCL CE VS +DE F DL VD++Q++S+T CLR FS+ E L
Sbjct: 274 PNTTRWVHELFEGTLTSETKCLTCEKVSQRDEVFLDLSVDLEQHSSVTACLRKFSAEEML 333
Query: 186 CSDNKFKCDNCASYQEAQ 203
C NKF CDNC QEA+
Sbjct: 334 CERNKFHCDNCGGLQEAE 351
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Query: 197 ASYQEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDR 253
A ++ Q P IS LEK ++GP R ++++FG+ N+GNTCY NS+LQ LY+ PFR+
Sbjct: 22 APKKDLQTPQISPLEKRLQDMGPIRGDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREA 81
Query: 254 VLEYKAKNKKNKETLLSCLA 273
V+ Y + ETL + +A
Sbjct: 82 VINYPQRTP--VETLEAAMA 99
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G P++F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 175 ESLFTSLKDIFESLVASQTRIGVTRPQQFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 233
>gi|326436872|gb|EGD82442.1| ubiquitin carboxyl-terminal hydrolase 12 [Salpingoeca sp. ATCC
50818]
Length = 969
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 66/132 (50%), Positives = 95/132 (71%), Gaps = 5/132 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VK++P +LA+HLKRFKY+++M + K+ HRVVFP ELRLF+ ++ A DR+Y+L
Sbjct: 762 QKRMRVKRMPNVLAIHLKRFKYVERMQQFTKLDHRVVFPKELRLFNATEAAEEEDRIYDL 821
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS-----DHQKS 440
A V+H GS P+RGHYI+IV+S+ W+LFDDD+VD + ++ FFG T+
Sbjct: 822 FAFVVHIGSRPSRGHYITIVRSNGNWVLFDDDIVDVMTDDELQLFFGRTATQCSYGQTHP 881
Query: 441 SETGYILFYQSR 452
ET YILFY++R
Sbjct: 882 LETAYILFYETR 893
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 78/115 (67%), Gaps = 7/115 (6%)
Query: 231 FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN------KKNKETLLSCLADLFHNIATHKK 284
FGNTCY NSVLQALYFCKPFR VL+Y+ K+ LLS LA LFH+IA KK
Sbjct: 536 FGNTCYCNSVLQALYFCKPFRHHVLQYRDSGFTADDGGKDGSRLLSELAALFHSIAHGKK 595
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
K G+I+PK+F +L+ E + F + MQQDA E LNFL+N I E C++ ++ ++ A
Sbjct: 596 KTGTISPKRFYQQLKAENELFRSNMQQDAQELLNFLLNTIAE-CVQRQETVVVKA 649
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 24/161 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINE--------VILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F + MQQDA E LNFL+N I E V+ + + S A G S+
Sbjct: 616 FRSNMQQDAQELLNFLLNTIAECVQRQETVVVKARSSKGRRGSSSPASTISSGTTRSAVS 675
Query: 126 F---------EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
E TWVH+IF+G+L+SET+CL+CETV ++DE F DL +DI ++ SI+ CL
Sbjct: 676 ATSSSSSSSQENKTWVHDIFEGVLSSETRCLSCETVRTRDECFLDLSLDIDRDCSISSCL 735
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
R FS+TETL +D+K+ C+ C S QEAQ PN+ A+
Sbjct: 736 RSFSNTETLSADSKYFCETCCSKQEAQKRMRVKRMPNVLAI 776
>gi|303312803|ref|XP_003066413.1| CREB, putative [Coccidioides posadasii C735 delta SOWgp]
gi|240106075|gb|EER24268.1| CREB, putative [Coccidioides posadasii C735 delta SOWgp]
Length = 804
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 93/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ MK+K+LP ILALHLKRFKY + ++R K+ HRV +P LRLF+ +DD +PDR+Y L
Sbjct: 375 ERRMKIKRLPKILALHLKRFKYSEDLDRLQKLFHRVTYPYYLRLFNTTDDVEDPDRLYEL 434
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D+S +++FFG + + +
Sbjct: 435 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKSFVQNFFG----DRPTLTSA 490
Query: 445 YILFYQ 450
YILFYQ
Sbjct: 491 YILFYQ 496
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 88/147 (59%), Gaps = 18/147 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSN--------AKSKLSAPDGGGGD 119
F M QDAHEFLN L+N + + V+LS+ + + S+ +A DG
Sbjct: 230 FRTTMHQDAHEFLNLLLNQVVSNVEDDVVLLSDADEQSDNSEETSEGTSEETATDGSVS- 288
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
S+G + WVH++F+G LTSET+CL CETVS +DE F DL VD+++++S+T CL
Sbjct: 289 TLPSNGVKSSRNTRWVHQLFEGTLTSETQCLTCETVSQRDEVFLDLSVDLEEHSSVTACL 348
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS E LC NKF CDNC QEA+
Sbjct: 349 RKFSEEEVLCERNKFHCDNCGGLQEAE 375
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE+L + L DLF + ++VG I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 190 KESLFTSLKDLFEAVIASPERVGVIRPYHFLEILRREHEMFRTTMHQDAHEFLNLLLNQV 249
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G FGNTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 76 GQAQFGNTCYCNSILQCLYYSVPFRESVINYPRRS 110
>gi|302697379|ref|XP_003038368.1| hypothetical protein SCHCODRAFT_63953 [Schizophyllum commune H4-8]
gi|300112065|gb|EFJ03466.1| hypothetical protein SCHCODRAFT_63953, partial [Schizophyllum
commune H4-8]
Length = 425
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 90/125 (72%), Gaps = 5/125 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + ++VK+++RV FP ELRLF+ DD PDR++NL
Sbjct: 306 EKRMKIKKLPNVLALHLKRFKYQEDQQKYVKLAYRVAFPFELRLFNTVDDMDEPDRLFNL 365
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYISI+K+ WL+FDDD V I +S I ++G S+ + Y
Sbjct: 366 FAIVVHIGAGPHHGHYISIIKTLGTWLVFDDDNVYPISESEIPKYYG-----DSSAGSAY 420
Query: 446 ILFYQ 450
+L+YQ
Sbjct: 421 VLYYQ 425
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHI-NEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF--EEPT 130
F + M QDAHEFLN+L+N I EV R Q A AP ++SG E+ T
Sbjct: 174 FRSTMHQDAHEFLNYLLNKIVEEVEQQARAQPGADDSTLAPTVLTNTASTNSGTPPEDAT 233
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
VH +F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC NK
Sbjct: 234 LVHRLFEGVLTSETRCLTCETVSSRDECFLDLSIDIEQNSSVTACLRQFSASEMLCQKNK 293
Query: 191 FKCDNCASYQEAQG-------PNISAL 210
F CD+C QEA+ PN+ AL
Sbjct: 294 FFCDSCCELQEAEKRMKIKKLPNVLAL 320
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%)
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
N TL S L LF +I+T+ + G++AP+ FI +L++ + F + M QDAHEFLN+L+N
Sbjct: 133 NPPTLFSALRSLFLHISTNPAEKGTVAPRAFIDKLKEMNELFRSTMHQDAHEFLNYLLNK 192
Query: 324 INEK 327
I E+
Sbjct: 193 IVEE 196
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
+ R FGL NFGNTCY+NSV+QALYFC PFRD +++ + + LL
Sbjct: 31 DARKFGLENFGNTCYANSVIQALYFCTPFRDLMIQAHDPSAPHTPRLL 78
>gi|407929229|gb|EKG22064.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 693
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP ILALHLKRFKY + M R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 204 EKRMKVKRLPRILALHLKRFKYTEDMQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 263
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G G GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 264 YAVVVHIGGGAYHGHYVSIIKTEDRGWLLFDDEMVEPVDKAYVRNFFG----GENVLACA 319
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 320 YVLFYQ 325
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 83/155 (53%), Gaps = 15/155 (9%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSS 123
LE+ ++ F + M QDAHEFLN L+N + E + Q + G++ S
Sbjct: 50 LEILRRENEMFRSAMHQDAHEFLNLLLNEVVENVEQFSRQQQQQQIEQESAEHSGESDSG 109
Query: 124 ---------------SGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
+ WVH +F+G LTSET+CL CE VS +DE F DL VD++Q
Sbjct: 110 LAVAMSPVINNAFKNAATNNTGWVHSLFEGTLTSETRCLTCENVSQRDEAFLDLSVDLEQ 169
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
N+S+T CL+ FS E LC NKF CDNC QEA+
Sbjct: 170 NSSVTSCLKRFSEEEMLCERNKFHCDNCGGLQEAE 204
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L + L D+F I H+ +VG ++P+KF+ LR+E + F + M QDAHEFLN L+N +
Sbjct: 21 ESLFTSLKDIFEAIIAHRSRVGVVSPQKFLEILRRENEMFRSAMHQDAHEFLNLLLNEVV 80
Query: 326 E 326
E
Sbjct: 81 E 81
>gi|295661127|ref|XP_002791119.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281046|gb|EEH36612.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
Length = 793
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 312 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYFLRLFNTTDDAEDPDRLYEL 371
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ + WLLFDD++V+ +D++ + +FFG +
Sbjct: 372 YAVVVHIGGGPYHGHYVAIIKTENMGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 427
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 428 YVLFYQ 433
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F M QDAHEFLN L+N + + +E + + + G H+++ T
Sbjct: 168 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRCSPPEVDQQSESGEASEHATTTGSVATTLT 227
Query: 131 ------------WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
WVHE+F+G LTSET+CL CE VS +DE F DL VD+ Q++S+T CLR
Sbjct: 228 ASNASKSPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLDQHSSVTSCLRK 287
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 288 FSEEEMLCERNKFHCDNCGGLQEAE 312
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F + ++++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 128 QESLFTSLKDIFEAVVATQERIGVIRPYSFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 187
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 229 VNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFH 277
+GNTCY NS+LQ LY+ PFR+ V+ Y ++ ETL LA H
Sbjct: 13 AQYGNTCYCNSILQCLYYSVPFRESVINYPRRSP--IETLNDSLAKNLH 59
>gi|393246859|gb|EJD54367.1| cysteine proteinase, partial [Auricularia delicata TFB-10046 SS5]
Length = 263
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + ++VK+++RV FP ELRLF DDA +PDR+Y L
Sbjct: 142 EKRMKIKKLPNVLALHLKRFKYQEDTQKYVKLAYRVAFPHELRLFDTVDDAEDPDRLYEL 201
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYI+I+KS WL+FDD+ V+ + +S I +FG + +GY
Sbjct: 202 FAIVVHIGTGPHHGHYIAIIKSRGTWLVFDDNSVETMKESEIPKYFG-----DGNGGSGY 256
Query: 446 ILFYQS 451
+LFYQ+
Sbjct: 257 VLFYQA 262
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 83/144 (57%), Gaps = 33/144 (22%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + QDAHEF+N+L+N I E I S D H T+VH
Sbjct: 39 FRSPAHQDAHEFMNYLLNKIVEDIDS-------------------DAH-------ITFVH 72
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G+LTSET+CL CE VSS+DE F DL +DI+QN+S+T CLR FS++E LC NKF C
Sbjct: 73 ALFEGVLTSETRCLTCENVSSRDESFLDLSIDIEQNSSVTACLRSFSASEMLCQRNKFFC 132
Query: 194 DNCASYQEAQG-------PNISAL 210
D C QEA+ PN+ AL
Sbjct: 133 DACCGLQEAEKRMKIKKLPNVLAL 156
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L LF I+ + G+++P F+ ++R+ + F + QDAHEF+N+L+N I E
Sbjct: 1 TLFSALRSLFIYISHNADDKGTVSPLAFVNKVRQLHEPFRSPAHQDAHEFMNYLLNKIVE 60
>gi|452979627|gb|EME79389.1| hypothetical protein MYCFIDRAFT_142699, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 775
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 91/130 (70%), Gaps = 5/130 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 330 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDPDRLYEL 389
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFG----LTSDHQKS 440
+VV+H G GP GHY+SI+K+ D WLLFDD++V+ + ++ ++ FFG K
Sbjct: 390 YSVVVHIGGGPYHGHYVSIIKTQDKGWLLFDDELVEPVSKNYVQQFFGGDPVPGVQDAKQ 449
Query: 441 SETGYILFYQ 450
T Y+LFYQ
Sbjct: 450 LATAYVLFYQ 459
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 86/145 (59%), Gaps = 5/145 (3%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHIN---EVILSERPQ--SNAKSKLSAPDGGGG 118
LE+ ++ F + M QDAHEFLN L+N + E+ + P+ A + AP+ G
Sbjct: 186 LEILRRENEMFRSAMHQDAHEFLNLLLNQVVDNVEMFAKQHPEIVEAASANGHAPEEGAL 245
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
S + WVH++F+G+LTSET+CL CE S +DE F DL VD+ +TS+T CLR
Sbjct: 246 VKAQSKATLDTHWVHDLFEGLLTSETRCLTCENTSQRDEAFLDLSVDLDAHTSVTSCLRK 305
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 306 FSEEEMLCERNKFHCDNCGGLQEAE 330
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L + L D+F +I H+ ++G ++P +F+ LR+E + F + M QDAHEFLN L+N +
Sbjct: 157 ESLFTSLRDIFDSIVGHQSRIGVVSPHRFLEILRRENEMFRSAMHQDAHEFLNLLLNQVV 216
Query: 326 EKC-MKVKKLPMIL 338
+ M K+ P I+
Sbjct: 217 DNVEMFAKQHPEIV 230
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 45/71 (63%), Gaps = 4/71 (5%)
Query: 193 CDNCASYQEAQGPNISALEKEI----GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCK 248
++ + +++ P ++ LEK + GP + +++YFG N+G+TCY NS++Q LY+
Sbjct: 1 ANSTPAKKDSNAPQLTPLEKHLVDVTGPTKPDGSDKYFGFENYGSTCYCNSIIQCLYYSA 60
Query: 249 PFRDRVLEYKA 259
PFR+ V+ + +
Sbjct: 61 PFREHVINFPS 71
>gi|443729172|gb|ELU15171.1| hypothetical protein CAPTEDRAFT_121569, partial [Capitella teleta]
Length = 81
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/81 (79%), Positives = 75/81 (92%)
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFG 432
SDDA NPDR+Y+L+AVVIHCG+GPNRGHYISIVKSH WLLFDDD+VDKI+ S IE+F+G
Sbjct: 1 SDDASNPDRLYDLIAVVIHCGTGPNRGHYISIVKSHGLWLLFDDDIVDKIEVSAIEEFYG 60
Query: 433 LTSDHQKSSETGYILFYQSRD 453
+TSD QKSSE+GYILFYQSR+
Sbjct: 61 MTSDLQKSSESGYILFYQSRE 81
>gi|340385944|ref|XP_003391468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like, partial
[Amphimedon queenslandica]
Length = 124
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 90/121 (74%), Gaps = 4/121 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N S LE+ ++ P +ERY GL NFGNTCY+NSVLQALYFC PFR++VL+Y +K
Sbjct: 3 GANGSTLER---LEQLPEDERYNGLTNFGNTCYANSVLQALYFCLPFREKVLQYSHGEEK 59
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
ETLLS L+DLF +++ KKK G +AP+KFI R++KE FDN QQDAHEFLN+L+N
Sbjct: 60 T-ETLLSALSDLFIQMSSSKKKFGVVAPRKFIQRVKKENVVFDNMQQQDAHEFLNYLLNT 118
Query: 324 I 324
I
Sbjct: 119 I 119
>gi|299756478|ref|XP_001829362.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
gi|298411695|gb|EAU92322.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
Length = 944
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 93/128 (72%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + + R++K+++RV FP++LRLF+ DD + DR+Y+L
Sbjct: 301 EKRMKIKKLPNVLALHLKRFKYQEDLGRYIKLTYRVAFPMDLRLFNTVDDMEDADRLYHL 360
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYISI+K+ W +FDDD V I +S I +FG +S + Y
Sbjct: 361 FAIVVHIGNGPHHGHYISIIKNCGTWFVFDDDNVYSIPESDIPKYFG-----DSNSGSAY 415
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 416 VLYYQADD 423
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 22/159 (13%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG-------------G 118
D F + M QDAHEFLN+L+N I E + ER Q+ + + D G
Sbjct: 159 DIFRSTMHQDAHEFLNYLLNRIVEEMEVERKQT--RGSVQGEDLSGSIATLGSKAPPTLA 216
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+ S + + T VH +F+GILTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR
Sbjct: 217 SSTSGTNARDATLVHRLFEGILTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQ 276
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
FS++E LC+ NKF CD C QEA+ PN+ AL
Sbjct: 277 FSASEMLCNRNKFFCDACCDLQEAEKRMKIKKLPNVLAL 315
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L LF +IAT G++APK FI +L++ D F + M QDAHEFLN+L+N I E
Sbjct: 123 TLFSALRSLFIHIATQPGDKGTVAPKAFIDKLKELNDIFRSTMHQDAHEFLNYLLNRIVE 182
Query: 327 KCMKVKK 333
+ M+V++
Sbjct: 183 E-MEVER 188
>gi|378727391|gb|EHY53850.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 756
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ H+VV+P LRLF+ +DDA +PDR+Y L
Sbjct: 391 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHKVVYPYHLRLFNTTDDAEDPDRLYEL 450
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++++K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 451 YAVVVHIGGGPYHGHYVAVIKTQDRGWLLFDDEMVEPVDKNFVRNFFG----DKPGLACA 506
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 507 YVLFYQ 512
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 61 SLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAP----DGG 116
S LE ++ F + M QDAHEFLN L+N + E I + A+ K P DG
Sbjct: 232 SRFLETLRKENEMFRSAMHQDAHEFLNLLLNTVVENIEDHDRKLVARKKAEGPSSTTDGA 291
Query: 117 GGDNHSSSG-------------FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
+ + S W+HE+F+G LTSET+CL CE VS +DE F DL
Sbjct: 292 ADISRTESNTVSFPSVLPTPTTTSPTGWLHELFEGTLTSETRCLTCENVSQRDEPFLDLS 351
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD++Q++S+T CLR FS E LC NKF CDNC QEA+
Sbjct: 352 VDLEQHSSVTACLRRFSEEEMLCERNKFHCDNCGGLQEAE 391
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 194 DNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDR 253
D+ SY + P A + P R PP ++ + + KP
Sbjct: 117 DHVLSYPKRSTPESVAHAQANAPPRVPPAQQNGAAKKPPGPSSARNAGTPPQQQKPEDKD 176
Query: 254 VLEYKAKNK-----------------KNKETLLSCLADLFHNIATHKKKVGSIAPKKFIT 296
EYK K + ETL + L DLF + ++ ++G I+P +F+
Sbjct: 177 SPEYKKKQALLAGPILNMSYENSQEYEMPETLFTSLKDLFEAVVVNQSRMGVISPSRFLE 236
Query: 297 RLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
LRKE + F + M QDAHEFLN L+N + E
Sbjct: 237 TLRKENEMFRSAMHQDAHEFLNLLLNTVVE 266
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
++ P + LE+ + GP R ++++FG+ NFGNTCY NS+LQ LY+ PFRD VL
Sbjct: 62 KDPNAPIPTPLERMLMNAGPIRNDGSDKFFGMENFGNTCYCNSILQCLYYSVPFRDHVLS 121
Query: 257 YKAKN 261
Y ++
Sbjct: 122 YPKRS 126
>gi|409083593|gb|EKM83950.1| hypothetical protein AGABI1DRAFT_51555, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 592
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 91/128 (71%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFK+ + + +++K+++RV FP ELRLF+ DD N DR+Y L
Sbjct: 309 EKRMKIKKLPNVLALHLKRFKFQEDVQKYIKLTYRVTFPFELRLFNTVDDLENADRLYEL 368
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYISIVKS WL+FDDD V I + I +FG +S + Y
Sbjct: 369 FAIVVHLGNGPHHGHYISIVKSVGSWLVFDDDNVYPIPEVEIPKYFG-----DSNSGSAY 423
Query: 446 ILFYQSRD 453
+L+YQ+ D
Sbjct: 424 VLYYQATD 431
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 96/159 (60%), Gaps = 20/159 (12%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQ-----------SNAKSKLSAPDGGGGDN 120
++F + M QDAHEFLN L+N I E I ER S+ + S P
Sbjct: 165 EDFRSTMHQDAHEFLNHLLNMIVEEIEEERKSAQNNTLGEDCDSSVATLASPPTIVTATT 224
Query: 121 HSSSGF--EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
S+SG +E T VH++F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR
Sbjct: 225 SSNSGSLPQEATLVHKLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRS 284
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQG-------PNISAL 210
FS++E LC NKF CD C QEA+ PN+ AL
Sbjct: 285 FSASEMLCQRNKFLCDACCDLQEAEKRMKIKKLPNVLAL 323
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 74/163 (45%), Gaps = 51/163 (31%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRD----------------------------- 252
+ + FG NFGNTCY NSVLQ LYFC PFRD
Sbjct: 33 DAKKFGYENFGNTCYVNSVLQTLYFCGPFRDLIIQAEDSSFPRGSSSISQDAQAKPILPI 92
Query: 253 ----RVLEYKAKNK------------------KNKETLLSCLADLFHNIATHKKKVGSIA 290
RV E K + TL S L LF I+TH G+I+
Sbjct: 93 VPVRRVPERKLSTSGSPSDTPSAAIAHPHPIPSSSPTLFSALRSLFLYISTHPGDKGTIS 152
Query: 291 PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
P+ FI +L++ K++F + M QDAHEFLN L+N I E+ + +K
Sbjct: 153 PRTFIDKLKETKEDFRSTMHQDAHEFLNHLLNMIVEEIEEERK 195
>gi|296421086|ref|XP_002840097.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636309|emb|CAZ84288.1| unnamed protein product [Tuber melanosporum]
Length = 654
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFK+M+ + R K+ +RV++P LRLF+ +DDA +PDR+Y L
Sbjct: 241 EKRMKIKRLPKVLALHLKRFKFMENLGRFEKLHYRVLYPYHLRLFNTTDDAEDPDRLYEL 300
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++IVK+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 301 YAVVVHIGGGPYHGHYVAIVKTEDKGWLLFDDELVEPVDKAFVRNFFG----ERPGMACA 356
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 357 YVLFYQ 362
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 83/147 (56%), Gaps = 15/147 (10%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINE---------------VILSERPQSNAKSKLSAPDGG 116
D F QDAHEFLN+++N + E ++ + P ++ +
Sbjct: 95 DMFSGQQHQDAHEFLNYVLNQVIENVEDYQKKHGYKNGNIVTNSTPAKSSGTLTPVNASS 154
Query: 117 GGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
S + W+HE+F+G+LTSETKCL CE VS +DE F DL +D+++N+S+T CL
Sbjct: 155 AASTASLTSTSPTGWIHELFEGLLTSETKCLTCENVSRRDEQFLDLSIDLEKNSSVTSCL 214
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS++E LC NKF CD+C QEA+
Sbjct: 215 RNFSASEMLCERNKFHCDSCGGLQEAE 241
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 2/98 (2%)
Query: 236 YSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFI 295
Y NS+LQ LY+ KPFR+ V + + + E+L S L D+F +I H + G ++P +F+
Sbjct: 30 YCNSILQCLYYSKPFRENVGNHASYGME--ESLFSALKDIFESIVAHNSRTGVVSPNRFL 87
Query: 296 TRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
LR+E D F QDAHEFLN+++N + E +K
Sbjct: 88 DILRRENDMFSGQQHQDAHEFLNYVLNQVIENVEDYQK 125
>gi|367052119|ref|XP_003656438.1| hypothetical protein THITE_2121057 [Thielavia terrestris NRRL 8126]
gi|347003703|gb|AEO70102.1| hypothetical protein THITE_2121057 [Thielavia terrestris NRRL 8126]
Length = 692
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP +LALHLKRFKY + +R K+ HRVV+P LRLF+ +DDA +PDRMY L
Sbjct: 215 EKRMKVKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRLFNTTDDAEDPDRMYEL 274
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY++++K+ D WLLFDD++V+ +D+S +++FFG +
Sbjct: 275 YAVVVHIGGNAYHGHYVAVIKTKDRGWLLFDDEMVEPVDKSFVQNFFG----DKPGMACA 330
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 331 YVLFYQ 336
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 83/139 (59%), Gaps = 9/139 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAKSKLSA-PDGGGG----DNHSSSGF 126
F N M QDAHEF ++N + N R Q A S+ P G N ++
Sbjct: 77 FRNSMHQDAHEFYGIVLNDVIANVEANGRRMQEVAASRKQGDPSQASGPALSTNEAALTT 136
Query: 127 EEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTET 184
+ P WVH+IF+G+LTSET+CL CET S +DE F DL +D+++++S+T CL+ FS+ E
Sbjct: 137 KSPGTGWVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEHSSVTACLQQFSAEEM 196
Query: 185 LCSDNKFKCDNCASYQEAQ 203
LC NKF CD+C QEA+
Sbjct: 197 LCERNKFHCDHCGGLQEAE 215
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + + G ++P++F+ ++ + F N M QDAHEF ++N +
Sbjct: 37 EECTFTGLKDIFTALIESQSRTGVLSPRRFLDIFKRNNEMFRNSMHQDAHEFYGIVLNDV 96
>gi|452836416|gb|EME38360.1| hypothetical protein DOTSEDRAFT_75790 [Dothistroma septosporum
NZE10]
Length = 745
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/130 (51%), Positives = 89/130 (68%), Gaps = 5/130 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 354 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFHLRLFNTTDDAEDPDRLYEL 413
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTS----DHQKS 440
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ + + + +FFG K
Sbjct: 414 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDELVEPVSKDYVMNFFGGEPGPGVQDAKQ 473
Query: 441 SETGYILFYQ 450
Y+LFYQ
Sbjct: 474 LACAYVLFYQ 483
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHIN---EVILSERPQSNAKSKLSAPDGGG--- 117
LE+ ++ F M QDAHEFLN L+N + E+ +RP+ A +AP+
Sbjct: 205 LEILRRENEMFRTAMHQDAHEFLNLLLNQVVDNVELFAKQRPELAAHMNGAAPEKARVDI 264
Query: 118 -----GDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSI 172
G N +G + WVH++F+G+LTSET+CL CE S +DE F DL VD+ +TS+
Sbjct: 265 SVDTRGLNMPKAGLDT-RWVHDLFEGLLTSETRCLTCENTSQRDEAFLDLSVDLSAHTSV 323
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T CLR FS E LC NKF CDNC QEA+
Sbjct: 324 TSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 354
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F I HK ++G ++P +F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 175 EESLFTSLRDIFEAIIQHKSRIGVVSPHRFLEILRRENEMFRTAMHQDAHEFLNLLLNQV 234
Query: 325 NEKCMKVKKLPMILALHL 342
+ K LA H+
Sbjct: 235 VDNVELFAKQRPELAAHM 252
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 195 NCASYQEAQGPNISALEKEI----GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPF 250
+ + ++ P + LEK + GP R ++++FG+ N+G+TCY NS++Q LY+ PF
Sbjct: 20 SAPAKRDPNAPQPTPLEKHLADVTGPVRPDGSDKFFGMENYGSTCYCNSIIQCLYYSAPF 79
Query: 251 RDRVLEYKAK 260
R+ V+ + ++
Sbjct: 80 RENVINFPSQ 89
>gi|361131981|gb|EHL03596.1| putative ubiquitin carboxyl-terminal hydrolase creB [Glarea
lozoyensis 74030]
Length = 685
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP IL LHLKRFKY + M R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 307 EKRMKIKKLPKILTLHLKRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 366
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
A+V+H GS GHY+S++K+ D WLLFDD++V+ +D+ +++FFG +
Sbjct: 367 YAIVVHIGSNAYHGHYVSVIKTQDRGWLLFDDEMVEPVDKHYVKNFFG----DKPGQACA 422
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 423 YVLFYQ 428
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 84/144 (58%), Gaps = 15/144 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSER----------PQSNAKSKLSAPDGGGGDNH 121
F M QDAHEF ++N + N ++R P S KS L++ G
Sbjct: 165 FRTSMHQDAHEFYGLVLNAVISNVEANAQRMKELDSAQNDPNSAYKSALTSSAMAMGLI- 223
Query: 122 SSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
S +G P WVH+IF+G LTSETKCL CET S +DE F DL +D+++++S+T CLR F
Sbjct: 224 SGTGTRSPGTGWVHDIFEGTLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKF 283
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S+ E LC NKF CDNC QEA+
Sbjct: 284 SAEEMLCERNKFHCDNCGGLQEAE 307
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF----LNFL 320
+E+ + L D+F + + + G ++P++F+ +++ + F M QDAHEF LN +
Sbjct: 125 EESTFTALKDIFMAMIANSSRTGVLSPQRFLEIFKRDNEMFRTSMHQDAHEFYGLVLNAV 184
Query: 321 INHINEKCMKVKKL 334
I+++ ++K+L
Sbjct: 185 ISNVEANAQRMKEL 198
>gi|406866254|gb|EKD19294.1| ubiquitin carboxyl-terminal hydrolase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 750
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + M R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 374 EKRMKIKRLPKILALHLKRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 433
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 434 YAVVVHIGGNAYHGHYVSVIKTQDRGWLLFDDEMVEPVDKHYVRNFFG----DKPGMACA 489
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 490 YVLFYQ 495
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 88/155 (56%), Gaps = 15/155 (9%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHI--NEVILSER-------------PQSNAKS 108
LE+ ++ F M QDAHEF ++N + N ++R QS ++
Sbjct: 220 LEIFKQENEMFRTSMHQDAHEFYGLVLNAVISNVEANAQRMRELSTPKSEEGLAQSMTQA 279
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
SA G N S + WVHEIF+G+LTSETKCL CET S +DE F DL +D+++
Sbjct: 280 GPSAAHDMGLGNESGARSPGAGWVHEIFEGVLTSETKCLTCETASQRDETFLDLSIDLEE 339
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
++S+T CLR FS+ E LC NKF CDNC QEA+
Sbjct: 340 HSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAE 374
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF----LNFL 320
+E+ + L D+F + + G ++P+KF+ ++E + F M QDAHEF LN +
Sbjct: 190 EESTFTALKDIFMALIATNSRTGVLSPQKFLEIFKQENEMFRTSMHQDAHEFYGLVLNAV 249
Query: 321 INHINEKCMKVKKL 334
I+++ ++++L
Sbjct: 250 ISNVEANAQRMREL 263
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 215 GPDRFPPNERYFGLVNFGN---TCYSNSVLQALYFCKPFRDRVLEY 257
GP R ++++FGL N Y NS++QALY+ PFR+ + Y
Sbjct: 47 GPIRNDGSDKFFGLENVQKLIPASYCNSIVQALYYSVPFRENTVRY 92
>gi|398398369|ref|XP_003852642.1| hypothetical protein MYCGRDRAFT_109481 [Zymoseptoria tritici
IPO323]
gi|339472523|gb|EGP87618.1| hypothetical protein MYCGRDRAFT_109481 [Zymoseptoria tritici
IPO323]
Length = 761
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA + DR+Y L
Sbjct: 352 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDADRLYEL 411
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTS----DHQKS 440
+VV+H G GP GHY+SIVK+ D WLLFDD++V+ +D+S + +FFG K
Sbjct: 412 SSVVVHIGGGPYHGHYVSIVKTQDRGWLLFDDELVEPVDKSYVMNFFGGEPVPGVQDAKQ 471
Query: 441 SETGYILFYQ 450
Y+LFYQ
Sbjct: 472 LACAYVLFYQ 481
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 93/151 (61%), Gaps = 11/151 (7%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHIN---EVILSERP-QSNAKSKLSAPDGGGGD 119
LE+ ++ F + M QDAHEFLN L+N + E+ + P + + SAP+ G G+
Sbjct: 202 LEILRRENEMFRSAMHQDAHEFLNLLLNQVVDNVEMFAKQNPLPAPPAADGSAPEDGDGE 261
Query: 120 NHS--SSGFEEPT-----WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSI 172
+ + SG P WVH++F+G+LTSET+CL CET S +DE F DL VD++ +TS+
Sbjct: 262 DSAVVQSGNTAPAVLDTHWVHDLFEGLLTSETRCLTCETTSQRDEAFLDLSVDLEAHTSV 321
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T CLR FS E LC NKF CDNC QEA+
Sbjct: 322 TSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 352
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + + D+F I +++ + G ++P +F+ LR+E + F + M QDAHEFLN L+N +
Sbjct: 172 EESLFTSMRDIFEAIISNQSRYGVVSPHRFLEILRRENEMFRSAMHQDAHEFLNLLLNQV 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 200 QEAQGPNISALEKEIG----PDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
++ P + LEK + P R ++++FG N+G+TCY NS++Q LY+ PFR+ V+
Sbjct: 24 KDPNAPAPTPLEKHLADITDPIRKDGSDKFFGFENYGSTCYCNSIVQCLYYSAPFREHVI 83
Query: 256 EYKA 259
+ +
Sbjct: 84 NFPS 87
>gi|392578433|gb|EIW71561.1| hypothetical protein TREMEDRAFT_22545, partial [Tremella
mesenterica DSM 1558]
Length = 329
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/128 (51%), Positives = 92/128 (71%), Gaps = 5/128 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + + R+ K+ +RV FPLELRL + SDDA NPDR+Y L
Sbjct: 207 EKRMKIKRLPNVLALHLKRFKYQESLGRYTKLFYRVPFPLELRLPNTSDDAENPDRLYEL 266
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H G+GP+ GHY+++V+S W++ DD+ V+ I++ I +FG S GY
Sbjct: 267 FAVVVHIGNGPHHGHYVAMVRSAGRWVMCDDENVEPIEEKDIYRYFG-----DYPSGAGY 321
Query: 446 ILFYQSRD 453
+LFYQ+ D
Sbjct: 322 VLFYQAVD 329
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/144 (45%), Positives = 90/144 (62%), Gaps = 17/144 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F QQDAHEFL +L+NH+ E + ER + +++ AP G T+VH
Sbjct: 88 FRGMSQQDAHEFLGWLLNHVAEDV--ERVDKHLRAEGRAPTMAKGHGK--------TFVH 137
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G+LT+ET+CL+CE SS+DE F DL +DI+Q+TS+T CLR FS++E LC NKF C
Sbjct: 138 NLFEGVLTNETRCLSCEMTSSRDESFLDLSIDIEQHTSVTACLRQFSASEMLCQKNKFYC 197
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PN+ AL
Sbjct: 198 DSCCGLQEAEKRMKIKRLPNVLAL 221
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA----- 280
+GL NFGNTCY NSVLQALY C+P R + Y + LF +
Sbjct: 1 WGLENFGNTCYCNSVLQALYACQPLRQFIEAYPDVPAPISPLGPPPGSSLFAPLTPSASV 60
Query: 281 ---THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
K G + P + ++KE + F QQDAHEFL +L+NH+ E +V K
Sbjct: 61 GSPVTSKSRGVVRPDDLLKTVKKENEMFRGMSQQDAHEFLGWLLNHVAEDVERVDK 116
>gi|261205668|ref|XP_002627571.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis
SLH14081]
gi|239592630|gb|EEQ75211.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis
SLH14081]
Length = 790
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/108 (56%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 360 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFG 432
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG
Sbjct: 420 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVRNFFG 467
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 79/145 (54%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG---------------G 118
F M QDAHEFLN L+N + + +E +S + G
Sbjct: 216 FRTAMHQDAHEFLNLLLNEVVANVEAEAKRSPPPELDQQSENGEMSVNTTTTGSVATTLA 275
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+++S WVHE+F+G LTSET+CL CE +S +DE F DL VD+ Q++S+T CLR
Sbjct: 276 TSNTSKSPNTTRWVHELFEGTLTSETQCLTCENISQRDEVFLDLSVDLDQHSSVTSCLRK 335
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS E LC NKF CDNC QEA+
Sbjct: 336 FSEEEMLCERNKFHCDNCGGLQEAE 360
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E+L + L D+F I ++++G I P F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 176 QESLFTSLKDIFEAIVASQERMGVIRPYTFLEVLRREHEMFRTAMHQDAHEFLNLLLNEV 235
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 207 ISALEK---EIGPDRFPPNERYFGLVN--FGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
++ LEK + GP R ++++FG+ N +GNTCY NS+LQ LY+ PFR+ V+ Y ++
Sbjct: 33 MTPLEKMLQDAGPLRNDGSDKFFGMENAQYGNTCYCNSILQCLYYSVPFRESVINYPRRS 92
Query: 262 KKNKETLLSCLA 273
E+L CLA
Sbjct: 93 P--IESLNECLA 102
>gi|440636366|gb|ELR06285.1| hypothetical protein GMDG_02079 [Geomyces destructans 20631-21]
Length = 761
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP IL LHLKRFKY + M R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 364 EKRMKIKRLPKILTLHLKRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 423
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHYISI+K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 424 YAVVVHIGGNAYHGHYISIIKTQDRGWLLFDDEMVEPVDKHYVRNFFG----DKPGMACA 479
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 480 YVLFYQ 485
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 91/170 (53%), Gaps = 14/170 (8%)
Query: 48 TSLQDKISLG-WECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHI-----------NE 95
T +Q + +G LE+ ++ F M QDAHEF L+N + E
Sbjct: 195 TLIQSQTRMGILSPQRFLEIFKRDNEMFRTTMHQDAHEFYGILLNAVITNVEENARRLKE 254
Query: 96 VILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--WVHEIFQGILTSETKCLNCETVS 153
+ + + +SA S+G + P WVH+IF+G+LTSETKCL CE S
Sbjct: 255 LEPPKYEEVMGDGMMSAFANSASVMGLSTGAQSPGTGWVHDIFEGVLTSETKCLTCEAAS 314
Query: 154 SKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+DE F DL +D++Q++S+T CLR FS+ E LC NKF CDNC QEA+
Sbjct: 315 QRDETFIDLSIDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAE 364
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 195 NCASYQEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFR 251
N + Q+ +++ LEK + GP R ++++FG+ NFGNTCY NS++QALY+ PFR
Sbjct: 22 NASKKQQEPVVDLTPLEKMLLNAGPIRPDGSDKFFGMENFGNTCYCNSIVQALYYSIPFR 81
Query: 252 DRVLEY 257
+ VL Y
Sbjct: 82 EHVLRY 87
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 242 QALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKE 301
QA+ P D E A+ +E+ + L D+F + + ++G ++P++F+ +++
Sbjct: 161 QAM-LAGPIVDLTYE-NARQYGMEESTFTALKDIFTTLIQSQTRMGILSPQRFLEIFKRD 218
Query: 302 KDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKL 334
+ F M QDAHEF L+N ++ E ++K+L
Sbjct: 219 NEMFRTTMHQDAHEFYGILLNAVITNVEENARRLKEL 255
>gi|145345991|ref|XP_001417481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577708|gb|ABO95774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 344
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K M + + P +L+LHLKRFKY++ + RH K++HRVVFP EL++ +L D+A NPD
Sbjct: 212 HEAQKRMLIHEAPKVLSLHLKRFKYIEALGRHAKLNHRVVFPSELKIPNLIDEAENPDAS 271
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS-S 441
Y L AVV+H GSGPN GHY+ K++ W L+DDD V+ +D+ ++ FG T+D + S
Sbjct: 272 YKLFAVVVHIGSGPNHGHYVCFAKNNHRWFLYDDDCVEVVDEEQLQQVFGSTTDGGSAGS 331
Query: 442 ETGYILFY 449
E GYILFY
Sbjct: 332 EHGYILFY 339
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 10/120 (8%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA----------KNKKNKE 266
D FPP+ ++FGL NFGNTCY NSVLQALY C FR+R++E+ A + K+ +
Sbjct: 5 DAFPPSAKFFGLENFGNTCYCNSVLQALYACDEFRERLIEHHAAANDGTSTSGRGKETPD 64
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
++L+ L DLF I+ K+ G ++P+ FI RLRK+ F +M QDAHEFLNFL+N E
Sbjct: 65 SMLAALGDLFREISGQTKRTGYVSPRAFIERLRKDNVLFRGHMHQDAHEFLNFLLNECCE 124
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 78/133 (58%), Gaps = 23/133 (17%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP---T 130
F +M QDAHEFLNFL+N E N ++KL G EP T
Sbjct: 103 FRGHMHQDAHEFLNFLLNECCE---------NLQTKLK-----------RDGAWEPGKKT 142
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
W+H++F+G L ++T+CL CE ++++E F DL VD++QNTSIT CL FS+ E L ++K
Sbjct: 143 WIHDVFEGKLANQTRCLWCENTTNREECFLDLSVDVEQNTSITACLNNFSAKELLDKNDK 202
Query: 191 FKCDNCASYQEAQ 203
F+CD C EAQ
Sbjct: 203 FQCDRCGGLHEAQ 215
>gi|116182392|ref|XP_001221045.1| hypothetical protein CHGG_01824 [Chaetomium globosum CBS 148.51]
gi|88186121|gb|EAQ93589.1| hypothetical protein CHGG_01824 [Chaetomium globosum CBS 148.51]
Length = 842
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDRMY L
Sbjct: 356 EKRMKVKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYEL 415
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY++++K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 416 YAVVVHIGGNAYHGHYVAVIKTKDRGWLLFDDEMVEPVDKNFVRNFFG----DKPGMACA 471
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 472 YVLFYQ 477
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 85/144 (59%), Gaps = 19/144 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAKSK------------LSAPDGGGGD 119
F N M QDAHEF ++N + N ++R Q A+S+ LS G
Sbjct: 218 FRNSMHQDAHEFYGIVLNDVIANVEANAKRMQEQAESRNENGPSQITDTALSKAGSGAVT 277
Query: 120 NHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
S +G WVH+IF+G+LTSET+CL CET S +DE F DL +D+++++S+T CL+ F
Sbjct: 278 RASGTG-----WVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEHSSVTACLQSF 332
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S+ E LC NKF CD+C QEA+
Sbjct: 333 SAEEMLCERNKFHCDHCGGLQEAE 356
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Query: 205 PNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
P+++ LEK + GP R ++++FGL NFGNTCY NS++QALY + FR+ V+ Y
Sbjct: 33 PDLTPLEKLLPISGPIREDGSDKFFGLENFGNTCYCNSIVQALYHSEQFREHVVNY 88
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 254 VLEYKAKNK---KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
VLE +NK +E + L D+F + + G ++P++F+ ++ + F N M
Sbjct: 164 VLELAEENKDLSGIEECTFTGLRDIFTTFIDSQSRTGVLSPQRFLDIFKRNNEMFRNSMH 223
Query: 311 QDAHEFLNFLINHI 324
QDAHEF ++N +
Sbjct: 224 QDAHEFYGIVLNDV 237
>gi|322701584|gb|EFY93333.1| ubiquitin carboxyl-terminal hydrolase 12 [Metarhizium acridum CQMa
102]
Length = 645
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 255 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 314
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K+ D WLLFDD++V+ +D+ + +FFG + T
Sbjct: 315 YAVVVHIGGNAYHGHYVSIIKTKDRGWLLFDDEMVEPVDKHFVRNFFG----DKPGMATA 370
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 371 YVLFYQ 376
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHIN----------EVILSERPQSNAKSKLSAPDGGGGDNHSS 123
F N M QDAHEF ++N + + + R Q + G NH +
Sbjct: 114 FRNSMHQDAHEFYGLVLNDVIANVEKTARKCQELGKARRQDGLTQSVENIIGAAALNHGA 173
Query: 124 SGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
+G++ P WVH+IF+G+LTSET+CL CET S +DE F DL +D++++ S+T CLR FS+
Sbjct: 174 AGYQSPGIGWVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEHASVTSCLRKFSA 233
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 234 EEMLCERNKFHCDHCGGLQEAE 255
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 75 ECTFTGLKDIFLALLESNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 133
>gi|322705635|gb|EFY97219.1| ubiquitin hydrolase CreB [Metarhizium anisopliae ARSEF 23]
Length = 790
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 396 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 455
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K+ D WLLFDD++V+ +D+ + +FFG + T
Sbjct: 456 YAVVVHIGGNAYHGHYVSIIKTKDRGWLLFDDEMVEPVDKHFVRNFFG----DKPGMATA 511
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 512 YVLFYQ 517
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHI----------NEVILSERPQSNAKSKLSAPDGGGGDNHSS 123
F N M QDAHEF ++N + + + R Q + NH +
Sbjct: 255 FRNSMHQDAHEFYGLVLNDVISNVEKTARKYQELEEARRQDGLTQSVENIISAAALNHGA 314
Query: 124 SGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
+G++ P WVH+IF+G+LTSET+CL CET S +DE F DL +D++++ S+T CLR FS+
Sbjct: 315 AGYQSPGIGWVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEHASVTSCLRKFSA 374
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 375 EEMLCERNKFHCDHCGGLQEAE 396
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 3/61 (4%)
Query: 207 ISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
++ LEK + GP R ++++FG NFGNTCY NS++QAL++ FR+ V+ Y +
Sbjct: 65 VTPLEKMLQNAGPLREDGSDKFFGFENFGNTCYCNSIVQALFYSDLFRESVINYPPYSPS 124
Query: 264 N 264
N
Sbjct: 125 N 125
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 216 ECTFTGLKDIFLALLESNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 274
>gi|367018374|ref|XP_003658472.1| hypothetical protein MYCTH_2055311 [Myceliophthora thermophila ATCC
42464]
gi|347005739|gb|AEO53227.1| hypothetical protein MYCTH_2055311 [Myceliophthora thermophila ATCC
42464]
Length = 899
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP ILALHLKRFKY + +R K+ HRVV+P LR+F +DDA +PDRMY L
Sbjct: 369 EKRMKVKKLPKILALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFMTTDDAEDPDRMYEL 428
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY++++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 429 YAVVVHIGGNAYHGHYVAVIKTKDRGWLLFDDEMVEPVDKHFVRNFFG----DKPGMACA 484
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 485 YVLFYQ 490
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 84/154 (54%), Gaps = 27/154 (17%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQ----SNAKSKLSAPDGGG---------- 117
F N M QDAHEF ++N + N ++R Q S +K S+ G
Sbjct: 219 FRNSMHQDAHEFYGIVLNDVIANVEAYAKRTQELADSTSKEDPSSHQAAGAIALTTTTMT 278
Query: 118 --------GDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN 169
G SSG WVH+IF+G+LTSET+CL CET S +DE F DL +D++++
Sbjct: 279 TTTTTTNAGSVTRSSGT---GWVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEH 335
Query: 170 TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+S+T CL FS+ E LC NKF CD+C QEA+
Sbjct: 336 SSVTACLLNFSAEEMLCERNKFHCDHCGGLQEAE 369
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 192 KCDNCASYQEAQG---PNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALY 245
K DN AS + + P+++ LEK + GP R ++++FGL NFGNTCY NS++QALY
Sbjct: 17 KSDNTASAKSKKDEPQPDLTPLEKLLQNAGPIREDGSDKFFGLENFGNTCYCNSIVQALY 76
Query: 246 FCKPFRDRVLEY 257
+ FR V+ Y
Sbjct: 77 HSEQFRRHVVNY 88
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + + G I+P++F+ ++ + F N M QDAHEF ++N +
Sbjct: 179 EECTFTALRDIFQAMIESQSRTGVISPQRFLDIFKRNNEMFRNSMHQDAHEFYGIVLNDV 238
>gi|453085849|gb|EMF13892.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 809
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 89/130 (68%), Gaps = 5/130 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA + DR+Y L
Sbjct: 356 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAEDSDRLYEL 415
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFG----LTSDHQKS 440
+VV+H G GP GHY+SIVK+ D WLLFDD++V+ + + ++ FFG + K
Sbjct: 416 YSVVVHIGGGPYHGHYVSIVKTEDRGWLLFDDELVEPVSKDYVQQFFGGEPVPGAQDAKQ 475
Query: 441 SETGYILFYQ 450
Y+LFYQ
Sbjct: 476 LACAYVLFYQ 485
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 86/152 (56%), Gaps = 11/152 (7%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHIN---EVILSERPQSNAKSKLSAPDGGGGD 119
LE+ ++ F + M QDAHEFLN L+N + E+ + PQ A L+ D
Sbjct: 205 FLEILRRENEMFRSAMHQDAHEFLNLLLNQVVDNVELFAKQHPQIAAAPHLNGNTPEAKD 264
Query: 120 --------NHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS 171
+++ + WVH++F+G+LTSET+CL CE S +DE F DL VD+ ++S
Sbjct: 265 LALTTTQSTTATAPALDTHWVHDLFEGLLTSETRCLTCENTSQRDEAFLDLSVDLDAHSS 324
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+T CLR FS E LC NKF CDNC QEA+
Sbjct: 325 VTSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 356
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E+L + L D+F I + + G ++P +F+ LR+E + F + M QDAHEFLN L+N +
Sbjct: 177 ESLFTSLRDIFEAIIKNPSRTGVVSPHRFLEILRRENEMFRSAMHQDAHEFLNLLLNQVV 236
Query: 326 EKC-MKVKKLPMILA 339
+ + K+ P I A
Sbjct: 237 DNVELFAKQHPQIAA 251
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 193 CDNCASYQEAQGPNISALEKEIG-----PDRFPPNERYFGLVNFGNTCYSNSVLQALYFC 247
+ + ++ P + LE+ + P R +++YFG N+G+TCY NS++Q LY+
Sbjct: 19 ASSLPARKDPNAPVPTPLERHLADVAAQPIRPDGSDKYFGFENYGSTCYCNSIVQCLYYS 78
Query: 248 KPFRDRVLEYKA 259
KPFR+ V+ + +
Sbjct: 79 KPFREHVINFPS 90
>gi|449299301|gb|EMC95315.1| hypothetical protein BAUCODRAFT_72138 [Baudoinia compniacensis UAMH
10762]
Length = 730
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 88/130 (67%), Gaps = 5/130 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ ++DA +PDR+Y L
Sbjct: 360 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFHLRLFNTTEDAEDPDRLYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFG----LTSDHQKS 440
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ + + + FFG +
Sbjct: 420 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDELVEPVSRDYVLSFFGGDPVPGVQDARQ 479
Query: 441 SETGYILFYQ 450
Y+LFYQ
Sbjct: 480 LACAYVLFYQ 489
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/160 (40%), Positives = 90/160 (56%), Gaps = 23/160 (14%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI---------LSERPQSNAKSKLSAP 113
LE+ ++ F + M QDAHEFLN L+N + + + L+++P +N +AP
Sbjct: 205 FLEILRRENEMFRSAMHQDAHEFLNLLLNQVVDNVESFSRQHPALTQQPHANG----AAP 260
Query: 114 DGG-------GGDNHSSSGFEE---PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
+ G N G ++ WVH++F+G LTSET+CL CE S +DE F DL
Sbjct: 261 EKGLAAAMSAAVANAHRRGIQQDQDAHWVHDLFEGTLTSETRCLTCENTSQRDEAFLDLS 320
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD+ +TS+T CLR FS E LC NKF CDNC QEA+
Sbjct: 321 VDLSPHTSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAE 360
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F I + ++G ++P KF+ LR+E + F + M QDAHEFLN L+N +
Sbjct: 177 ESLFTSLKDIFEAILNNPSRIGVVSPHKFLEILRRENEMFRSAMHQDAHEFLNLLLNQV 235
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 10/79 (12%)
Query: 200 QEAQGPNISALEKEI----GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
++ P ++LEK + GP R ++++FG N+G+TCY NS++Q LY+ PFR+ VL
Sbjct: 25 KDPNAPQPTSLEKHLADVTGPTRLDGSDKFFGFENYGSTCYCNSIIQCLYYSAPFREHVL 84
Query: 256 EYKAKNKKNKETLLSCLAD 274
+ +K L LAD
Sbjct: 85 NFPSK------PFLDSLAD 97
>gi|299469848|emb|CBN76702.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 500
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD---RM 382
EK +++K+LP +L LHLKRFKY++ + K+SHRVVFPLELR +++D A D R+
Sbjct: 370 EKKIRLKRLPRVLTLHLKRFKYVESLENFSKLSHRVVFPLELRTPNMTDAAGEADADGRL 429
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
Y L AVV+H G GPN GHY+++VKS WLLFDD++V+ +++ ++ FGL ++
Sbjct: 430 YRLFAVVVHIGRGPNHGHYVAVVKSGGRWLLFDDEIVELVNEQVLKQCFGLARPASAATN 489
Query: 443 TGYILFY 449
TGY+L Y
Sbjct: 490 TGYLLLY 496
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 70/102 (68%), Gaps = 10/102 (9%)
Query: 119 DNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
D + SG E TWVH IFQG+LT++TKCL CETVS++DE F DL +D++QN+S++ CLR
Sbjct: 288 DGANESGGE--TWVHRIFQGVLTNQTKCLCCETVSNRDEPFMDLSLDVEQNSSVSACLRN 345
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFP 220
FSSTETL NKF C+ C + QEA EK+I R P
Sbjct: 346 FSSTETLTKKNKFFCETCYALQEA--------EKKIRLKRLP 379
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 21/145 (14%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK----------------- 265
ER+FGL NFGNTCY NSVLQALYFC+P R + + + ++
Sbjct: 25 ERFFGLENFGNTCYCNSVLQALYFCEPLRHHLAQVREEDTSGGGSGDGSSSGGGGGSGGS 84
Query: 266 -ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+T+LS LA+LF +I+ K++ G +AP +F+ LR+ + F QQDAHEF NF++N +
Sbjct: 85 GKTVLSELAELFSSISNQKRRSGHLAPTEFLRTLRERNELFRGNRQQDAHEFFNFVLNEM 144
Query: 325 NEKCMKVKKL---PMILALHLKRFK 346
+ + +KL + H +RF+
Sbjct: 145 ADSVVARRKLREEAATVQEHKQRFQ 169
>gi|346979615|gb|EGY23067.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 771
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 379 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 438
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D WLLFDD++V+ +D+ + +FFG + +
Sbjct: 439 YAVVVHIGGNAYHGHYVSVIKTQDRGWLLFDDEMVEPVDKHFVRNFFG----DKPGTACA 494
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 495 YVLFYQ 500
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 67/161 (41%), Gaps = 41/161 (25%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLS------ 111
LE+ ++ F N M QDAHEF ++N + N + ER +NA + L+
Sbjct: 239 LEIFKRDNEMFRNSMHQDAHEFYGLVLNDVIANVEQNARRIQEREDANASAGLAQSVENA 298
Query: 112 --------APDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
P GG +G WVH+IF+G K +N +
Sbjct: 299 LGAGVSSLVPQVNGGARSPGTG-----WVHDIFEG----PRKEMNLPRL----------- 338
Query: 164 VDIKQNTSITQ-CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VD CLR FS+ E LC NKF CD+C QEA+
Sbjct: 339 VDRSGGALFRHSCLRKFSAEEMLCERNKFHCDHCGGLQEAE 379
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + +VG ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 210 ECTFTGLKDIFGALMQSEDRVGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 268
>gi|426201368|gb|EKV51291.1| hypothetical protein AGABI2DRAFT_53794, partial [Agaricus bisporus
var. bisporus H97]
Length = 266
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 90/126 (71%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFK+ + + +++K+++RV FP ELRLF+ DD N DR+Y L
Sbjct: 146 EKRMKIKKLPNVLALHLKRFKFQEDVQKYIKLTYRVTFPFELRLFNTVDDLENADRLYEL 205
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G+GP+ GHYISIVKS WL+FDDD V I + I +FG +S + Y
Sbjct: 206 FAIVVHLGNGPHHGHYISIVKSVGSWLVFDDDNVYPIPEVEIPKYFG-----DSNSGSAY 260
Query: 446 ILFYQS 451
+L+YQ+
Sbjct: 261 VLYYQA 266
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 89/150 (59%), Gaps = 33/150 (22%)
Query: 70 SSDEFDNYMQQDAHEFLNFLINHINEVILSER--PQSNAKSKLSAPDGGGGDNHSSSGFE 127
+ ++F + M QDAHEFLN L+N I E I ER PQ
Sbjct: 35 TKEDFRSTMHQDAHEFLNHLLNMIVEEIEEERNLPQ------------------------ 70
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
E T VH++F+G+LTSET+CL CETVSS+DE F DL +DI+QN+S+T CLR FS++E LC
Sbjct: 71 EATLVHKLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRSFSASEMLCQ 130
Query: 188 DNKFKCDNCASYQEAQG-------PNISAL 210
NKF CD C QEA+ PN+ AL
Sbjct: 131 RNKFLCDACCDLQEAEKRMKIKKLPNVLAL 160
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL S L LF I+TH G+I+P+ FI +L++ K++F + M QDAHEFLN L+N I E
Sbjct: 1 TLFSALRSLFLYISTHPGDKGTISPRTFIDKLKETKEDFRSTMHQDAHEFLNHLLNMIVE 60
Query: 327 KCMKVKKLPMILALHLKRFK 346
+ + + LP L K F+
Sbjct: 61 EIEEERNLPQEATLVHKLFE 80
>gi|358395839|gb|EHK45226.1| hypothetical protein TRIATDRAFT_292767 [Trichoderma atroviride IMI
206040]
Length = 729
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP +L LHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDRMY L
Sbjct: 352 EKRMKVKRLPKVLTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYEL 411
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K+ D W+LFDD++V+ +D+ + +FFG + T
Sbjct: 412 YAVVVHIGGNAYHGHYVSIIKTKDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMATA 467
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 468 YVLFYQ 473
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 90/151 (59%), Gaps = 11/151 (7%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLS---APD 114
LE+ ++ F N M QDAHEF ++N + N L E+ S+L+
Sbjct: 202 LEIFKRDNEMFRNSMHQDAHEFYGLVLNDVIANVEANARRLQEQLDIKGNSELAHSVQTA 261
Query: 115 GGGGDNHSSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSI 172
G ++ +G+ P WVH+IF+G+LTSETKCL CET S +DE F DL +D++Q++S+
Sbjct: 262 LGSALMNNMTGYRTPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEQHSSV 321
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T CLR FS+ E LC NKF CD+C QEA+
Sbjct: 322 TSCLRKFSAEEMLCERNKFHCDHCGGLQEAE 352
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 173 ECTFTGLKDIFLAVLQSSTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 231
>gi|351711168|gb|EHB14087.1| Ubiquitin carboxyl-terminal hydrolase 46 [Heterocephalus glaber]
Length = 218
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 89/126 (70%), Gaps = 3/126 (2%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
MQQDAHEF N+L+N I +++ E+ + KL + + + E TW+HEIFQ
Sbjct: 1 MQQDAHEFFNYLLNTIADILQEEKKEEKQNGKLK---NDNMNEPAENNKPELTWIHEIFQ 57
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G+LT+ET+CLNCETVSSKDEDF DL V+++QNTSI LR FS+TETLCS+ K+ C+ C
Sbjct: 58 GMLTNETQCLNCETVSSKDEDFLDLSVNVEQNTSIIHFLRDFSNTETLCSEQKYYCETCC 117
Query: 198 SYQEAQ 203
S Q+AQ
Sbjct: 118 SKQKAQ 123
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%), Gaps = 2/38 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNR--HVKVSHRV 361
+K M+VKKLP+ILALHLK FKYM++++ +KV+ RV
Sbjct: 123 QKRMRVKKLPVILALHLKWFKYMEQLHSTASLKVTRRV 160
>gi|358388775|gb|EHK26368.1| hypothetical protein TRIVIDRAFT_35696 [Trichoderma virens Gv29-8]
Length = 723
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP +L LHLKRFKY + +R K+ HRVV+P LR+F+ ++DA +PDRMY L
Sbjct: 354 EKRMKVKKLPKVLTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTEDAEDPDRMYEL 413
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K+ D W+LFDD++V+ +D+ + +FFG + T
Sbjct: 414 YAVVVHIGGNAYHGHYVSIIKTPDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMATA 469
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 470 YVLFYQ 475
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 94/151 (62%), Gaps = 11/151 (7%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKL--SAPDG 115
LE+ ++ F N M QDAHEF ++N + N + ER + A++ L S +
Sbjct: 204 LEIFKRDNEMFRNSMHQDAHEFYGLVLNDVIANVEANARKIQERLEIKAQTDLVQSVENA 263
Query: 116 -GGGDNHSSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSI 172
G ++++G+ P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+
Sbjct: 264 LGSALMNNATGYRTPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSV 323
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T CLR FS+ E LC NKF CD+C QEA+
Sbjct: 324 TSCLRKFSAEEMLCERNKFHCDHCGGLQEAE 354
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 175 ECTFTGLKDIFLAVLQSSTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 233
>gi|308802820|ref|XP_003078723.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
gi|116057176|emb|CAL51603.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
Length = 1084
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 94/137 (68%), Gaps = 3/137 (2%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H +K + ++ P +L+LHLKRFKY++ + RH K++HRVVFP EL+L +LSDDA +PD
Sbjct: 946 HEAQKRLLIQSAPKVLSLHLKRFKYIEALGRHAKLNHRVVFPSELKLPNLSDDADDPDVR 1005
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-SS 441
Y L +VV+H GSGPN GHY+ VK++ W LFDDD V+ +D+ + FG T + S
Sbjct: 1006 YVLFSVVVHIGSGPNHGHYVCFVKNNHRWFLFDDDTVEVVDEEQLHRVFGSTVERGPMGS 1065
Query: 442 ETGYILFY--QSRDSTD 456
E GY+LF+ QS D T+
Sbjct: 1066 EHGYMLFFERQSDDQTE 1082
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 78/135 (57%), Gaps = 15/135 (11%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
A + K +G D FP ++FGL NFGNTCY NSVLQALY C+PFR ++E +
Sbjct: 721 ADAARVQVSAKSLGDD-FPNEAKFFGLENFGNTCYCNSVLQALYACEPFRRALIERAMSS 779
Query: 262 --------------KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDN 307
++ ETLL L DLFH I+T K G ++PK FI RLRK+ + F
Sbjct: 780 ANGTSTSGRGWMSGRREPETLLDALGDLFHEISTQGKITGCVSPKAFIERLRKDNELFRG 839
Query: 308 YMQQDAHEFLNFLIN 322
M QDAHEF NFL+N
Sbjct: 840 AMHQDAHEFFNFLLN 854
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 19/180 (10%)
Query: 24 GLVNGKTCKEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAH 83
G ++G+ +E E ++ + + S Q KI+ +E ++ F M QDAH
Sbjct: 789 GWMSGR--REPETLLDALGDLFHEISTQGKITGCVSPKAFIERLRKDNELFRGAMHQDAH 846
Query: 84 EFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSE 143
EF NFL+N E + SE +S GD S TW+H+IF+G L ++
Sbjct: 847 EFFNFLLNECCENLESELKRS-------------GDWESG----RKTWIHDIFEGKLANQ 889
Query: 144 TKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T+C+ CE ++++E F DL VD+ QNTSIT CL FS+ E L ++KF+CD C EAQ
Sbjct: 890 TRCMWCENTTNREECFLDLSVDVDQNTSITACLNNFSAKELLDKNDKFQCDRCGGLHEAQ 949
>gi|400601437|gb|EJP69080.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
2860]
Length = 722
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP +L LHL RFKY + +R K+ HRVV+P LR+FH +D+A +PDR+Y L
Sbjct: 354 EKRMKVKKLPKVLTLHLNRFKYTEDYSRVQKLFHRVVYPYHLRMFHTADEAEDPDRLYEL 413
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D WLLFDD++V+ +D+ + +FFG + T
Sbjct: 414 YAVIVHIGGNGYHGHYVSIIKTRDRGWLLFDDEMVEPVDKHFVRNFFG----DRPGMATA 469
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 470 YLLFYQ 475
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 80/144 (55%), Gaps = 17/144 (11%)
Query: 74 FDNYMQQDAHEFLNFLIN-----------HINEVILSERPQSNAKSKLSAPDGGG---GD 119
F + QDAHEFL ++ HI + + + + L G G
Sbjct: 214 FQSSNHQDAHEFLRLVLTDVIASVDNHAKHIQDHLDTSSATNGLSESLRNAVSAGLTTGS 273
Query: 120 NHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
++S G WVH++F+G++TSETKCL CET S +D+ F DL + + ++TS+T CLR F
Sbjct: 274 PYNSPGT---GWVHDVFEGVVTSETKCLTCETASQRDQTFLDLSIALDEHTSVTSCLRKF 330
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S+ E LC +KF+CD+C QEA+
Sbjct: 331 SAEEMLCERDKFQCDHCGGLQEAE 354
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F + QDAHEFL ++ +
Sbjct: 175 ECTFTGLKDIFLALTQSNSRTGVLSPQRFLEIFKRDNEMFQSSNHQDAHEFLRLVLTDV 233
>gi|429858292|gb|ELA33117.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum
gloeosporioides Nara gc5]
Length = 750
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDRMY L
Sbjct: 370 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYEL 429
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D W+LFDD++V+ +D+ + +FFG +
Sbjct: 430 YAVVVHIGGNAYHGHYVSVIKTKDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMACA 485
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 486 YVLFYQ 491
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLSAPDGGG 117
LE+ ++ F N M QDAHEF ++N + N + ER N + + +
Sbjct: 219 LEIFKRDNEMFRNSMHQDAHEFYGLVLNDVISNVETNARRIQEREAENRDGLVQSVENAL 278
Query: 118 GD----NHSSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS 171
G N +G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+ +++S
Sbjct: 279 GATSLINRPVNGMGSPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLDEHSS 338
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+T CLR FS+ E LC NKF CD+C QEA+
Sbjct: 339 VTSCLRKFSAEEMLCERNKFHCDHCGGLQEAE 370
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK + GP R +++FGL NFGNTCY NS++QAL++ + FRD V++
Sbjct: 30 KEEPAPELTPLEKMLQNAGPLREDGTDKFFGLENFGNTCYCNSIVQALFYSESFRDHVVK 89
Query: 257 Y 257
Y
Sbjct: 90 Y 90
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 189 EECTFTGLKDIFQALIESNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 248
>gi|340517400|gb|EGR47644.1| deubiquinating enzyme [Trichoderma reesei QM6a]
Length = 729
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/126 (50%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP +L LHLKRFKY + +R K+ HRVV+P LR+F+ ++DA +PDRMY L
Sbjct: 354 EKRMKVKRLPKVLTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTEDAEDPDRMYEL 413
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K+ D W+LFDD++V+ +D+ + +FFG + T
Sbjct: 414 YAVVVHIGGNAYHGHYVSIIKTPDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMATA 469
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 470 YVLFYQ 475
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 89/141 (63%), Gaps = 11/141 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKL--SAPDG-GGGDNHSSS 124
F N M QDAHEF ++N + N + ER + N +S L S + G ++++
Sbjct: 214 FRNSMHQDAHEFYGLVLNDVIANVEANARKIQERLEVNGQSDLVQSVENALGSALVNNAT 273
Query: 125 GFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
G+ P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 274 GYRTPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSAE 333
Query: 183 ETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 334 EMLCERNKFHCDHCGGLQEAE 354
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 175 ECTFTGLKDIFLAVLQSNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 233
>gi|340924161|gb|EGS19064.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 926
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP ILALHLKRFKY + +R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 348 EKRMKVKKLPKILALHLKRFKYTEDYSRLQKLFHRVVYPYHLRLFNTTDDAQDPDRLYEL 407
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+ ++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 408 YAVVVHIGGNAYHGHYVVVIKTKDRGWLLFDDEMVEPVDKHFVRNFFG----DKPGMACA 463
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 464 YVLFYQ 469
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 85/134 (63%), Gaps = 9/134 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAKSKLSA--PDGGGGDNHSSSGFEEP 129
F N M QDAHEF ++N + N ++R Q A+SK P+G G +G
Sbjct: 220 FRNSMHQDAHEFYGIVLNDVIANVEENAKRMQEIAESKGIKLNPEGESGSRAPGTG---- 275
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
WVH+IF+G+LTSET+CL CET S +DE F DL +D+++++S+T CL+ FS+ E LC N
Sbjct: 276 -WVHDIFEGVLTSETRCLTCETASQRDETFLDLSIDLEEHSSVTSCLQKFSAEEMLCERN 334
Query: 190 KFKCDNCASYQEAQ 203
KF CD+C QEA+
Sbjct: 335 KFFCDHCGGLQEAE 348
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Query: 206 NISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++S +EK + GP R ++++FGL NFGNTCY NS++QALY + FR+ V+ Y
Sbjct: 34 DLSPVEKLLYNAGPIRPDGSDKFFGLENFGNTCYCNSIVQALYHSEHFRENVMNY 88
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE + L D+F + + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 180 KECTFTGLKDIFTALIESQSRTGVLSPQRFLDIFKRDNEMFRNSMHQDAHEFYGIVLNDV 239
>gi|50554945|ref|XP_504881.1| YALI0F01903p [Yarrowia lipolytica]
gi|49650751|emb|CAG77683.1| YALI0F01903p [Yarrowia lipolytica CLIB122]
Length = 826
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+++LP +LALHLKRFK+ + M R+ K+ HRVV+P LR+F + D +PD++Y L
Sbjct: 477 EKRMKIQRLPKVLALHLKRFKFTEDMQRNTKLFHRVVYPKYLRMFETTFDCPDPDKLYEL 536
Query: 386 VAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+S+VK+ H WLLFDD++V+ +D + +FFG + +
Sbjct: 537 YAVVVHIGGGPYHGHYVSVVKTEHAGWLLFDDEMVEAVDPHYVFNFFG----DNRGLASA 592
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 593 YVLFYQ 598
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 81/130 (62%), Gaps = 22/130 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLNFL+N + E + DG SS+ ++ W+H
Sbjct: 370 FRSSMHQDAHEFLNFLLNEVIESV----------------DG------SSASRDDSKWIH 407
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
E+F+G LTSETKCL CE+VS + E F DL +D+++N+S+T CLR FS++E LC NKF C
Sbjct: 408 ELFEGSLTSETKCLTCESVSRRHESFLDLSIDLERNSSVTACLRQFSASEMLCERNKFHC 467
Query: 194 DNCASYQEAQ 203
D C QEA+
Sbjct: 468 DTCCGLQEAE 477
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
Query: 206 NISALEKEIGPDRFP-------PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
N+ K++ P P P+ R+FG+ NFGNTCY NSVLQ LY+ KPFRD+VL +
Sbjct: 53 NLPTTPKDLPPSSAPATSALTAPSNRFFGMENFGNTCYCNSVLQCLYYTKPFRDQVLAFA 112
Query: 259 AKNKKNKE 266
+ + K+
Sbjct: 113 KDDSRPKK 120
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
A++ KE+L + L D+F ++ + ++G ++P IT L++E + F + M QDAHEFLN
Sbjct: 324 AQDYSMKESLFTALKDIFECMSENSSRIGIMSPSNLITVLKRENELFRSSMHQDAHEFLN 383
Query: 319 FLINHINE 326
FL+N + E
Sbjct: 384 FLLNEVIE 391
>gi|358338304|dbj|GAA56635.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Clonorchis sinensis]
Length = 828
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/96 (63%), Positives = 78/96 (81%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+KCM+VKK P+ILALHLKRFKY +++N K+S RVVFP ELRL + S A + + +Y L
Sbjct: 580 QKCMRVKKPPLILALHLKRFKYSEEVNSFTKLSCRVVFPTELRLPNTSGGAADQNWLYKL 639
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDK 421
+AVV+H GSGPNRGHY+++VKSH WLLFDD+VVDK
Sbjct: 640 IAVVVHSGSGPNRGHYVTLVKSHGLWLLFDDEVVDK 675
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/130 (47%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FDNY+QQDAHEFL +++N I++++ +E+ K PD ++ S+ + W+
Sbjct: 452 FDNYLQQDAHEFLIYILNEISDILQAEQQADQQLRKAERPDNDKNPDNVSADRSQ-NWIQ 510
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IFQG LT+ET+CL CE V +KDEDF DL VDI QN SI CL+ FS TE + S+NK+ C
Sbjct: 511 DIFQGCLTNETRCLTCENVRTKDEDFLDLSVDIAQNCSIVYCLKFFSDTEMMQSENKYYC 570
Query: 194 DNCASYQEAQ 203
+ C QEAQ
Sbjct: 571 EFCRCKQEAQ 580
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 52/62 (83%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KETLLSCLADLFH I T KK VG IAPKKFI+RL++E FDNY+QQDAHEFL +++N I
Sbjct: 412 KETLLSCLADLFHAITTQKKSVGQIAPKKFISRLKRENGAFDNYLQQDAHEFLIYILNEI 471
Query: 325 NE 326
++
Sbjct: 472 SD 473
>gi|222623104|gb|EEE57236.1| hypothetical protein OsJ_07224 [Oryza sativa Japonica Group]
Length = 451
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 94/125 (75%), Gaps = 4/125 (3%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MK+KK P +L +HLKRFKY+++++RH K+S+RVV+PLEL+L +S+DA D Y+L
Sbjct: 324 KRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLGSMSEDA---DCEYSLF 380
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-QKSSETGY 445
AVV+H GS PN GHY+S +KSH WL FDDD V ++ST++ F+G + +H +++ GY
Sbjct: 381 AVVVHVGSSPNHGHYVSQIKSHGNWLSFDDDTVQISEESTLQTFYGSSREHCGGNTDHGY 440
Query: 446 ILFYQ 450
ILFY+
Sbjct: 441 ILFYE 445
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 6/135 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF---EEP- 129
F +YM QDAHEF NFL+N I + IL E ++ S + P+ ++ E P
Sbjct: 190 FRSYMHQDAHEFWNFLVNDIID-ILEEDCRTANSSPETTPEEVSNGAANALANGARERPL 248
Query: 130 -TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
T VH FQGILT+ETKCL C+T+++KDE FFDL +D++QN+S+T CL+ F STE L +
Sbjct: 249 VTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNGE 308
Query: 189 NKFKCDNCASYQEAQ 203
+KF CD C+S QEA
Sbjct: 309 DKFFCDKCSSLQEAH 323
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%), Gaps = 3/88 (3%)
Query: 240 VLQALYFCKPFRDRVLEYKAKNKKNKET---LLSCLADLFHNIATHKKKVGSIAPKKFIT 296
V ALY C PFR+++LEY A K +++ LL+CLADLF I KK+ G +APK+F+
Sbjct: 122 VYLALYHCIPFREQLLEYYATYKNTEDSEDNLLTCLADLFSQITLAKKRTGVLAPKRFVQ 181
Query: 297 RLRKEKDEFDNYMQQDAHEFLNFLINHI 324
R+RK+ + F +YM QDAHEF NFL+N I
Sbjct: 182 RVRKQNELFRSYMHQDAHEFWNFLVNDI 209
>gi|402081279|gb|EJT76424.1| ubiquitin carboxyl-terminal hydrolase 13 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 755
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 96/141 (68%), Gaps = 6/141 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP +LALHLKRFKY + +R K+ HRVV+P +LR+F+ +++A +PDR+Y L
Sbjct: 363 EKRMKVKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYQLRMFNTTEEAADPDRVYEL 422
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ WLLFDD++V+ +D+ + +FFG D ++
Sbjct: 423 YAVVVHIGPNALHGHYVSVIKTPGRGWLLFDDEMVEPVDKHFVRNFFG---DKPGNTACA 479
Query: 445 YILFYQSRDSTDARTMNSNDC 465
Y+LFYQ ++T + M D
Sbjct: 480 YVLFYQ--ETTLEKVMAEQDA 498
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 14/144 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLS-APDGGGGDNHSSSGF 126
F N M QDAHEF ++N + N L E ++ AK L+ + + G + S+
Sbjct: 220 FRNSMHQDAHEFYGLVLNDVISNVEANAKKLRELDEARAKDALAQSVEKALGASVSALAR 279
Query: 127 EEPT-------WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
+P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CL+ F
Sbjct: 280 PQPGARSPGTGWVHDIFEGLLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTACLQKF 339
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S+ E LC NKF CD+C QEA+
Sbjct: 340 SAEEMLCERNKFHCDHCGGLQEAE 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK + GP R ++++FGL NFGNTCY NS++QALY+ + FR+ V+
Sbjct: 27 KEEPAPELTPLEKMLQNAGPLREDGSDKFFGLENFGNTCYCNSIVQALYYSETFRENVVN 86
Query: 257 Y 257
Y
Sbjct: 87 Y 87
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF----LNFL 320
+E+ + L DLF + + + G ++P++F+ +++ + F N M QDAHEF LN +
Sbjct: 180 QESTFTGLKDLFMALIESQTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 239
Query: 321 INHINEKCMKVKKL 334
I+++ K+++L
Sbjct: 240 ISNVEANAKKLREL 253
>gi|336261244|ref|XP_003345413.1| hypothetical protein SMAC_04644 [Sordaria macrospora k-hell]
gi|380090667|emb|CCC11662.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 860
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 360 EKRMKIKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D W+LFDD++V+ +D++ + +FFG +
Sbjct: 420 YAVIVHIGGNAYHGHYVSIIKTKDRGWVLFDDEMVEPVDKNFVANFFG----DKPGMACA 475
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 476 YVLFYQ 481
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 89/152 (58%), Gaps = 14/152 (9%)
Query: 66 LDLCSSDE--FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAK--SKLSAPDGGGGD 119
LD+ D F N M QDAHEF ++N + N + R Q + K + +P
Sbjct: 209 LDIFKRDNEMFRNSMHQDAHEFYGLVLNDVISNVEAYARRMQESGKVNGTIQSPLNQLSS 268
Query: 120 NHS------SSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS 171
+ S +S F P +WVH+IF+G+L SET+CL CET S +DE F DL +D+++++S
Sbjct: 269 SPSLMRSMMASNFRTPETSWVHDIFEGVLVSETRCLTCETASQRDETFLDLSIDLEEHSS 328
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+T CLR FS+ E LC NKF CD+C QEA+
Sbjct: 329 VTSCLRKFSAEEMLCERNKFHCDHCGGLQEAE 360
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 192 KCDNCASYQEAQ---GPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALY 245
K DN AS + + ++ LE+ + GP R +++YFGL NFGNTCY NS+LQALY
Sbjct: 17 KTDNNASSKNKKDEPAVELTPLERILQNAGPLREDGSDKYFGLENFGNTCYCNSILQALY 76
Query: 246 FCKPFRDRVLEYKAKNKKNKET 267
+ +PFR+ V+ Y N ++ T
Sbjct: 77 YSEPFRENVVNYPPLNNPSEGT 98
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G I+P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 179 EECTFTGLKDIFTALIQSSSRTGVISPQRFLDIFKRDNEMFRNSMHQDAHEFYGLVLNDV 238
>gi|164424898|ref|XP_965281.2| hypothetical protein NCU08378 [Neurospora crassa OR74A]
gi|157070708|gb|EAA36045.2| hypothetical protein NCU08378 [Neurospora crassa OR74A]
Length = 827
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 338 EKRMKIKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYEL 397
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D W+LFDD++V+ +D++ + +FFG +
Sbjct: 398 YAVIVHIGGNAYHGHYVSIIKTKDRGWVLFDDEMVEPVDKNFVANFFG----DKPGMACA 453
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 454 YVLFYQ 459
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 14/152 (9%)
Query: 66 LDLCSSDE--FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAK--SKLSAPDGGGGD 119
LD+ D F N M QDAHEF ++N + N + R Q + K S+P
Sbjct: 187 LDIFKRDNEMFRNSMHQDAHEFYGLVLNDVISNVEAYARRMQESRKEIGTTSSPLNQQSS 246
Query: 120 NHS------SSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS 171
+ S +S P +WVH+IF+G+L SET+CL CETVS +DE F DL +D+++++S
Sbjct: 247 SPSLTRSLMASNLRTPETSWVHDIFEGVLVSETRCLTCETVSQRDETFLDLSIDLEEHSS 306
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+T CLR FS+ E LC NKF CD C QEA+
Sbjct: 307 VTSCLRKFSAEEMLCERNKFHCDRCGGLQEAE 338
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G I+P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 157 EECTFTGLKDIFTALIQSNSRTGVISPQRFLDIFKRDNEMFRNSMHQDAHEFYGLVLNDV 216
>gi|350296273|gb|EGZ77250.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 819
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 338 EKRMKIKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYEL 397
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D W+LFDD++V+ +D++ + +FFG +
Sbjct: 398 YAVIVHIGGNAYHGHYVSIIKTKDRGWVLFDDEMVEPVDKNFVANFFG----DKPGMACA 453
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 454 YVLFYQ 459
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAK----------SKLSAPDGGGGDNH 121
F N M QDAHEF ++N + N + R Q + K + S+P
Sbjct: 197 FRNSMHQDAHEFYGLVLNDVISNVEAYARRMQESRKEIGTTSSPLNQQSSSPSLTRSLMA 256
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
S+ E +WVH+IF+G+L SET+CL CETVS +DE F DL +D+++++S+T CLR FS+
Sbjct: 257 SNLRTPETSWVHDIFEGVLVSETRCLTCETVSQRDETFLDLSIDLEEHSSVTSCLRKFSA 316
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD C QEA+
Sbjct: 317 EEMLCERNKFHCDRCGGLQEAE 338
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G I+P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 157 EECTFTGLKDIFTALIQSNSRTGVISPQRFLDIFKRDNEMFRNSMHQDAHEFYGLVLNDV 216
>gi|346320906|gb|EGX90506.1| ubiquitin C-terminal hydrolase CreB [Cordyceps militaris CM01]
Length = 854
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK M+VKKLP +L LHL RFKY + +R K+ HRVV+P LR+FH +D+A +PDR+Y L
Sbjct: 486 EKRMRVKKLPKVLTLHLNRFKYTEDYSRVQKLFHRVVYPYHLRMFHTADEAEDPDRLYEL 545
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D WLLFDD++V+ +D+ + +FFG + T
Sbjct: 546 YAVIVHIGGNGYHGHYVSIIKTRDRGWLLFDDEMVEPVDKHFVRNFFG----DRPGMATA 601
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 602 YLLFYQ 607
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 82/146 (56%), Gaps = 21/146 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN------------- 120
F + QDAHEFL ++ +VI S ++AK D G N
Sbjct: 346 FQSSNHQDAHEFLRLVLT---DVIASV--DNHAKHIQDHIDTGAATNGSIESLNNGLSVG 400
Query: 121 -HSSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLR 177
S S + P WVH++F+GI+TSETKCL CET S +D+ F DL + + ++TS++ CLR
Sbjct: 401 LQSGSPYNSPGTGWVHDVFEGIVTSETKCLTCETASRRDQTFLDLSIALDEHTSVSSCLR 460
Query: 178 GFSSTETLCSDNKFKCDNCASYQEAQ 203
FS+ E LC +KF+CD+C QEA+
Sbjct: 461 KFSAEEMLCERDKFQCDHCGGLQEAE 486
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + + G ++P++F+ +++ + F + QDAHEFL ++ +
Sbjct: 307 ECTFTGLKDIFMAVTQSNSRTGVLSPQRFLEIFKRDNEMFQSSNHQDAHEFLRLVLTDV 365
>gi|336464190|gb|EGO52430.1| hypothetical protein NEUTE1DRAFT_125926 [Neurospora tetrasperma
FGSC 2508]
Length = 827
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 338 EKRMKIKKLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYEL 397
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G GHY+SI+K+ D W+LFDD++V+ +D++ + +FFG +
Sbjct: 398 YAVIVHIGGNAYHGHYVSIIKTKDRGWVLFDDEMVEPVDKNFVANFFG----DKPGMACA 453
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 454 YVLFYQ 459
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHI--NEVILSERPQSNAK----------SKLSAPDGGGGDNH 121
F N M QDAHEF ++N + N + R Q + K + S+P
Sbjct: 197 FRNSMHQDAHEFYGLVLNDVISNVEAYARRMQESRKEIGTTSSPLNQQSSSPSLTRSVMA 256
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
S+ E +WVH+IF+G+L SET+CL CETVS +DE F DL +D+++++S+T CLR FS+
Sbjct: 257 SNLRTPETSWVHDIFEGVLVSETRCLTCETVSQRDETFLDLSIDLEEHSSVTSCLRKFSA 316
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD C QEA+
Sbjct: 317 EEMLCERNKFHCDRCGGLQEAE 338
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G I+P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 157 EECTFTGLKDIFTALIQSNSRTGVISPQRFLDIFKRDNEMFRNSMHQDAHEFYGLVLNDV 216
>gi|380491290|emb|CCF35426.1| ubiquitin carboxyl-terminal hydrolase, partial [Colletotrichum
higginsianum]
Length = 737
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 356 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 415
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D W+LFDD++V+ +D+ + +FFG +
Sbjct: 416 YAVVVHIGGNAYHGHYVSVIKTKDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMACA 471
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 472 YVLFYQ 477
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLSAPDGGGGD----NHSS 123
F N M QDAHEF ++N + N ER N + + + G N +
Sbjct: 215 FRNSMHQDAHEFYGLVLNDVISNVEANAKRAQERGAENRDGLVQSVENALGAANLMNRPA 274
Query: 124 SGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
+G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 275 NGMGSPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSA 334
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 335 EEMLCERNKFHCDHCGGLQEAE 356
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK + GP R +++FGL NFGNTCY NS++QAL++ + FRD V++
Sbjct: 16 KEEPAPELTPLEKMLQNAGPLREDGTDKFFGLENFGNTCYCNSIVQALFYSESFRDHVIK 75
Query: 257 Y 257
Y
Sbjct: 76 Y 76
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 175 EECTFTGLKDIFQALIESNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 234
>gi|320586987|gb|EFW99650.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 800
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 89/126 (70%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + K+ HRVV+P +LR+F+ +DDA +PDR+Y L
Sbjct: 378 EKRMKIKRLPKILALHLKRFKYAENYTKLEKLFHRVVYPYQLRMFNTTDDAQDPDRLYEL 437
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVVIH G GHY++++K+ + WLLFDD++V+ +D+ + +FFG + +
Sbjct: 438 YAVVIHIGGNAYHGHYVAVIKTKERGWLLFDDEMVEPVDKHYVRNFFG----DKPGTACA 493
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 494 YVLFYQ 499
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 17/157 (10%)
Query: 64 LELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSE----------RPQSNAKSKLSAP 113
LEL +++ F M QDAHEF ++N + + I + R QS+ K+ + A
Sbjct: 222 LELFRQANESFKTAMHQDAHEFYGLVLNDVIKNIEAASRQFREREDLRSQSDLKASVEAV 281
Query: 114 DGG--GGDNHSSSGFEEPT-----WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
G G + S ++ T WVH+IF+G+LTSET+CL CET S +DE F DL +D+
Sbjct: 282 LGSVDGIPPSALSPYDGTTTPGSGWVHDIFEGVLTSETRCLTCETSSQRDETFLDLSIDL 341
Query: 167 KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
++++S+T CLR FS+ E LC +KF CD C QEA+
Sbjct: 342 EEHSSVTSCLRKFSAEEMLCERDKFHCDTCGGLQEAE 378
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + G ++P +F+ R+ + F M QDAHEF ++N +
Sbjct: 193 ECTFTGLKDIFMAFIESNSRTGVLSPLRFLELFRQANESFKTAMHQDAHEFYGLVLNDV 251
>gi|310791022|gb|EFQ26555.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 753
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ +DDA +PDR+Y L
Sbjct: 369 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYEL 428
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D W+LFDD++V+ +D+ + +FFG +
Sbjct: 429 YAVVVHIGGNAYHGHYVSVIKTKDRGWVLFDDEMVEPVDKHFVRNFFG----DKPGMACA 484
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 485 YVLFYQ 490
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 83/142 (58%), Gaps = 12/142 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKLSAPDGGGGD----NHSS 123
F N M QDAHEF ++N + N + ER + + + G N S
Sbjct: 228 FRNSMHQDAHEFYGLVLNDVISNVEANAKRVQEREAETKDGLIQSVENALGAANLMNRSP 287
Query: 124 SGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
+G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 288 NGMGSPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSA 347
Query: 182 TETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 348 EEMLCERNKFHCDHCGGLQEAE 369
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 200 QEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK + GP R +++FGL NFGNTCY NS++QAL++ + FRD V++
Sbjct: 29 KEEPAPELTPLEKMLQNAGPLREDGTDKFFGLENFGNTCYCNSIVQALFYSESFRDHVIK 88
Query: 257 Y 257
Y
Sbjct: 89 Y 89
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E + L D+F + + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 188 EECTFTGLKDIFQALIESNTRTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 247
>gi|313231914|emb|CBY09026.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 66/118 (55%), Positives = 84/118 (71%), Gaps = 11/118 (9%)
Query: 219 FPPNE----------RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
FPP++ + GL+NFGNTCY NSVLQALYFC+PFR+RVLEY+ ++KK +L
Sbjct: 10 FPPDQDPETPKIDATHHHGLINFGNTCYCNSVLQALYFCEPFRERVLEYRKQSKKTDGSL 69
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
+ CLADLF+ +A KKK I P KF+ L+KE D FDN +Q DA EFLNFL+NHI +
Sbjct: 70 IWCLADLFNQLAA-KKKRQPIKPTKFVHMLKKENDAFDNVLQHDAQEFLNFLLNHIGD 126
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 89/133 (66%), Gaps = 4/133 (3%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D FDN +Q DA EFLNFL+NHI + + R + K+S ++S ++E T
Sbjct: 102 NDAFDNVLQHDAQEFLNFLLNHIGDTL---RDEIVRNQKVSQTQSDTHQHNSPCDYQE-T 157
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G++T+ T+CL CE+V+ KDE F DL VDI+ NTSI CL+ FS+TETL ++K
Sbjct: 158 WVHELFEGVMTNVTRCLRCESVNQKDERFLDLSVDIEPNTSINHCLKSFSATETLKGEHK 217
Query: 191 FKCDNCASYQEAQ 203
+ C+ C S QEA
Sbjct: 218 YYCEVCCSKQEAH 230
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 89/133 (66%), Gaps = 11/133 (8%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHV-KVSHRVVFPLELRL---FHLSDDAVNPDRM 382
K ++++ P +LALHLKRF++ D + H+ K+S+RVVF +LR+ + DD +
Sbjct: 231 KSLEIRSFPKVLALHLKRFRFEDGVRSHMTKLSYRVVFSRQLRIPSSKYSKDDGSTI--L 288
Query: 383 YNLVAVVIHCGSGPNRGHYISIVK---SHDFWLLFDDDVVDKIDQSTIEDFFGLT--SDH 437
Y L AVV+HCG NRGHYI++V+ SHD WL+FDD+ VD + Q+ +E FFGLT S
Sbjct: 289 YELNAVVVHCGKEINRGHYITLVRAHPSHDQWLVFDDEEVDFLPQAELEAFFGLTESSAG 348
Query: 438 QKSSETGYILFYQ 450
+ + E+ YILFY+
Sbjct: 349 RGNLESAYILFYE 361
>gi|167536978|ref|XP_001750159.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771321|gb|EDQ84989.1| predicted protein [Monosiga brevicollis MX1]
Length = 770
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 65/127 (51%), Positives = 94/127 (74%), Gaps = 3/127 (2%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+++K LP +LA+HLKRFKY ++ K+S RV P+ELR+ + +DDA + +R+Y+L A+
Sbjct: 597 LRIKALPNVLAVHLKRFKYSEQFQNLKKLSCRVAHPVELRVVNTTDDAEDAERLYDLFAI 656
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLT--SDHQ-KSSETGY 445
VIH GS RGHYI++VKS WLL+DDD V+ + +S+IED+FG T +HQ K+S T Y
Sbjct: 657 VIHIGSHLTRGHYIALVKSGMQWLLYDDDRVEAVPESSIEDYFGHTEMQEHQRKTSSTSY 716
Query: 446 ILFYQSR 452
+LFYQ+R
Sbjct: 717 LLFYQAR 723
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 19/132 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINE--VILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
+++ MQQDA EFLN+L+N ++E V L+ R + A AP + TW
Sbjct: 453 YNSSMQQDAQEFLNYLLNELSEQAVKLARRERPAAAD---AP--------------QKTW 495
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
V ++F+G LT+E +CL CET +++DE F DL +DI QN S+T CLR FSSTETL D+K+
Sbjct: 496 VEDLFRGTLTNEIRCLTCETTTTRDEHFLDLSLDIGQNCSLTSCLRNFSSTETLREDSKY 555
Query: 192 KCDNCASYQEAQ 203
C+ C S QE +
Sbjct: 556 YCEACCSKQEGE 567
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 79/126 (62%), Gaps = 14/126 (11%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIAT 281
+ER FGL NFGNTCY NSVLQALY C+PFRD +L + ++ TLL LA L+H IAT
Sbjct: 356 SERLFGLENFGNTCYFNSVLQALYHCQPFRDSLLIHSKSQREGDVTLLDALATLYHKIAT 415
Query: 282 HKKKVGSIAPKKFITRLRKEKDE--------------FDNYMQQDAHEFLNFLINHINEK 327
+K+ G I P++F LR+ +++ MQQDA EFLN+L+N ++E+
Sbjct: 416 SRKRHGIIQPRQFYACLRQSNASCPHASLTILGPVEIYNSSMQQDAQEFLNYLLNELSEQ 475
Query: 328 CMKVKK 333
+K+ +
Sbjct: 476 AVKLAR 481
>gi|389624701|ref|XP_003710004.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae 70-15]
gi|351649533|gb|EHA57392.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae 70-15]
Length = 766
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ + DA +PDR+Y L
Sbjct: 370 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYEL 429
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 430 YAVVVHIGGNAYHGHYVSVIKTADRGWLLFDDEMVEPVDKHFVRNFFG----DRPGMACA 485
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 486 YVLFYQ 491
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKL--SAPDGGGGDN---HS 122
F N M QDAHEF ++N + N L E+ Q+ AK L S D N +
Sbjct: 228 FRNSMHQDAHEFYGLVLNDVISTVEANAKRLQEQEQAAAKDGLAKSVEDALSPTNALVKA 287
Query: 123 SSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
+G+ P WVH+IF+G+LTSET+CL CET S +DE F DL +D+ +++S+T CLR FS
Sbjct: 288 PAGYRSPGTGWVHDIFEGLLTSETRCLTCETASQRDETFLDLSIDLDEHSSVTSCLRKFS 347
Query: 181 STETLCSDNKFKCDNCASYQEAQ 203
+ E LC NKF CD+C QEA+
Sbjct: 348 AEEMLCERNKFHCDHCGGLQEAE 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 30/36 (83%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++++FGL NFGNTCY NS++QALY+ + FR+ V+ Y
Sbjct: 55 SDKFFGLENFGNTCYCNSIVQALYYSEIFRESVVNY 90
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 250 FRDRVLEYKAKNKKN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFD 306
+ VLE +N + E+ + L DLF + + + G ++P++F+ +++ + F
Sbjct: 170 LKGPVLELAQENSASYGMDESTFTGLKDLFLALIESQSRTGVLSPQRFLEIFKRDNEMFR 229
Query: 307 NYMQQDAHEFLNFLINHI 324
N M QDAHEF ++N +
Sbjct: 230 NSMHQDAHEFYGLVLNDV 247
>gi|428183490|gb|EKX52348.1| hypothetical protein GUITHDRAFT_161377 [Guillardia theta CCMP2712]
Length = 351
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K ++VK+ P ILALHLKRFKY++ + R K+SHRVVFP+EL+L + +D A + D +NL
Sbjct: 225 KSIRVKRTPNILALHLKRFKYVESVGRLKKLSHRVVFPVELKLNNTTDAAADEDAFFNLF 284
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG N GHY+ ++K H+ W FDDD V+ +D S + FG ++ + +GYI
Sbjct: 285 AVVVHVGSGMNHGHYVCLIKIHEQWFHFDDDTVEGVDDSHLHSVFG-SAQEGGGNYSGYI 343
Query: 447 LFYQ 450
LFYQ
Sbjct: 344 LFYQ 347
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 92/138 (66%), Gaps = 7/138 (5%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK----- 258
G S LEK + P FP NER FGL NFGNTCY NSVLQALYFC PFR+ VL++
Sbjct: 2 GTTGSKLEKSL-PSSFPDNERIFGLENFGNTCYCNSVLQALYFCLPFREAVLDWARACVN 60
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
+K + +++++L +A+ F +I+++KKK G PKK I LRK + F Y QDAHEF+N
Sbjct: 61 SKVRNDEDSMLVSVAETFLHISSNKKKFGVYGPKKLIQVLRKNNEAFRGYQHQDAHEFMN 120
Query: 319 FLINHINEKC-MKVKKLP 335
+L+N I E+ M+ K+L
Sbjct: 121 YLLNQITEELHMEAKELA 138
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 122/252 (48%), Gaps = 57/252 (22%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK + P FP NER FGL N G TC
Sbjct: 2 GTTGSKLEKSL-PSSFPDNERIFGLENFGNTCYCNSVLQALYFCLPFREAVLDWARACVN 60
Query: 32 ---KEKEDR--IEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFL 86
+ ED + ++ F +S + K + LI L +++ F Y QDAHEF+
Sbjct: 61 SKVRNDEDSMLVSVAETFLHISSNKKKFGVYGPKKLIQVLRK-NNEAFRGYQHQDAHEFM 119
Query: 87 NFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP-TWVHEIFQGILTSETK 145
N+L+N I E + E + S P E P TWV IF+G LT+ET+
Sbjct: 120 NYLLNQITEELHMEAKELAPHSVDRTP-------------EMPKTWVQNIFEGTLTNETR 166
Query: 146 CLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA--- 202
CLNCETV+++DE F DL ++I++N+SIT CLR FS ETL +KF C+ C S QEA
Sbjct: 167 CLNCETVTNRDEAFLDLSLEIEENSSITSCLRNFSGIETLNKQDKFYCEKCCSLQEAHKS 226
Query: 203 ----QGPNISAL 210
+ PNI AL
Sbjct: 227 IRVKRTPNILAL 238
>gi|440467462|gb|ELQ36685.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae Y34]
Length = 779
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ + DA +PDR+Y L
Sbjct: 383 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYEL 442
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 443 YAVVVHIGGNAYHGHYVSVIKTADRGWLLFDDEMVEPVDKHFVRNFFG----DRPGMACA 498
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 499 YVLFYQ 504
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHI------NEVILSERPQSNAKSKL--SAPDGGGGDN---HS 122
F N M QDAHEF ++N + N L E+ Q+ AK L S D N +
Sbjct: 241 FRNSMHQDAHEFYGLVLNDVISTVEANAKRLQEQEQAAAKDGLAKSVEDALSPTNALVKA 300
Query: 123 SSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
+G+ P WVH+IF+G+LTSET+CL CET S +DE F DL +D+ +++S+T CLR FS
Sbjct: 301 PAGYRSPGTGWVHDIFEGLLTSETRCLTCETASQRDETFLDLSIDLDEHSSVTSCLRKFS 360
Query: 181 STETLCSDNKFKCDNCASYQEAQ 203
+ E LC NKF CD+C QEA+
Sbjct: 361 AEEMLCERNKFHCDHCGGLQEAE 383
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 250 FRDRVLEYKAKNKKN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFD 306
+ VLE +N + E+ + L DLF + + + G ++P++F+ +++ + F
Sbjct: 183 LKGPVLELAQENSASYGMDESTFTGLKDLFLALIESQSRTGVLSPQRFLEIFKRDNEMFR 242
Query: 307 NYMQQDAHEFLNFLINHI 324
N M QDAHEF ++N +
Sbjct: 243 NSMHQDAHEFYGLVLNDV 260
>gi|171695326|ref|XP_001912587.1| hypothetical protein [Podospora anserina S mat+]
gi|170947905|emb|CAP60069.1| unnamed protein product [Podospora anserina S mat+]
Length = 840
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 88/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVKKLP +LALHLKRFKY + +R K+ HR+V+P +R+F+ +DDA + DR+Y L
Sbjct: 362 EKRMKVKKLPKVLALHLKRFKYTEDYSRLQKLFHRIVYPYHIRMFNTTDDAEDQDRLYEL 421
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVVIH G GHY+S++K+ D WLLFDD++V+ +D+ +++FFG +
Sbjct: 422 YAVVIHIGGNAYHGHYVSVIKTKDRGWLLFDDEMVEPVDKHFVKNFFG----DKPGMACA 477
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 478 YVLFYQ 483
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 10/140 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHI-------NEVILSERPQSNAK-SKLSAPDGGGGDNHSSSG 125
F N M QDAHEF ++N + + +L E+ + + K LS+PD N ++
Sbjct: 223 FRNSMHQDAHEFYGLILNDVIANVEANAKRMLVEQAEGSGKDGPLSSPDTASVHNSNAID 282
Query: 126 FEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTE 183
P WVH+IF+G+LTSET+CL CE S +DE F DL +D+++++S+T CL+ FS+ E
Sbjct: 283 SRTPAAGWVHDIFEGVLTSETRCLTCEAASQRDETFLDLSIDLEEHSSVTSCLQKFSAEE 342
Query: 184 TLCSDNKFKCDNCASYQEAQ 203
LC NKF CD+C QEA+
Sbjct: 343 MLCERNKFHCDHCGGLQEAE 362
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 254 VLEYKAKNKKN---KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
VLE +N +E + L D+F + + + G ++P++F+ +++ + F N M
Sbjct: 169 VLELAQENPDTYGMQECTFTGLKDIFTALIESQSRTGVLSPQRFLEIFKRDNEMFRNSMH 228
Query: 311 QDAHEFLNFLINHI 324
QDAHEF ++N +
Sbjct: 229 QDAHEFYGLILNDV 242
>gi|440480427|gb|ELQ61089.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae P131]
Length = 821
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LALHLKRFKY + +R K+ HRVV+P LR+F+ + DA +PDR+Y L
Sbjct: 425 EKRMKIKRLPKVLALHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYEL 484
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+S++K+ D WLLFDD++V+ +D+ + +FFG +
Sbjct: 485 YAVVVHIGGNAYHGHYVSVIKTADRGWLLFDDEMVEPVDKHFVRNFFG----DRPGMACA 540
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 541 YVLFYQ 546
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 86/143 (60%), Gaps = 13/143 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVI------LSERPQSNAKSKL--SAPDGGGGDN---HS 122
F N M QDAHEF ++N + + L E+ Q+ AK L S D N +
Sbjct: 283 FRNSMHQDAHEFYGLVLNDVISTVEANAKRLQEQEQAAAKDGLAKSVEDALSPTNALVKA 342
Query: 123 SSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
+G+ P WVH+IF+G+LTSET+CL CET S +DE F DL +D+ +++S+T CLR FS
Sbjct: 343 PAGYRSPGTGWVHDIFEGLLTSETRCLTCETASQRDETFLDLSIDLDEHSSVTSCLRKFS 402
Query: 181 STETLCSDNKFKCDNCASYQEAQ 203
+ E LC NKF CD+C QEA+
Sbjct: 403 AEEMLCERNKFHCDHCGGLQEAE 425
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 41/130 (31%)
Query: 236 YSNSVLQALYFCKPFRDRVL------------------------EYKAKNKKNK------ 265
Y NS++QALY+ + FR+ V+ EYK K K
Sbjct: 173 YCNSIVQALYYSEIFRESVVNYPPFSPSDTPNGKRAKINKPDSPEYKKKQAMLKGPVLEL 232
Query: 266 -----------ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAH 314
E+ + L DLF + + + G ++P++F+ +++ + F N M QDAH
Sbjct: 233 AQENSASYGMDESTFTGLKDLFLALIESQSRTGVLSPQRFLEIFKRDNEMFRNSMHQDAH 292
Query: 315 EFLNFLINHI 324
EF ++N +
Sbjct: 293 EFYGLVLNDV 302
>gi|281212255|gb|EFA86415.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 558
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 94/131 (71%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KKLP L +HLKRFK+++++ ++ K+++RVVFP E+ + + D PD+ Y+L
Sbjct: 396 QKRMKIKKLPNTLIIHLKRFKFIEQIQQYKKLNYRVVFPFEIIIQNTVSDIEEPDKKYHL 455
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIH G+GPN GHY S+VKS+ +W+ FDD+ + I +S I D FG +S++ +E GY
Sbjct: 456 FAVVIHAGNGPNHGHYTSMVKSNGYWIGFDDENMGIIPESDIFDIFGSSSEYFGRNECGY 515
Query: 446 ILFYQSRDSTD 456
+LFYQS + +
Sbjct: 516 LLFYQSESAMN 526
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 83/145 (57%), Gaps = 22/145 (15%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGL--------------VNFGNTCYSNSVLQALYFCKP 249
G S EK++ P ER++GL ++FGNTCY NSVLQALY+C P
Sbjct: 2 GLGSSKFEKDLVSTEIPDTERFYGLRKCMLFLRLVWSVCLSFGNTCYCNSVLQALYYCTP 61
Query: 250 FRDRVLEYKAKN--------KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKE 301
FR+ VL+Y N + ++ L LADLF NI T KK+ G I PK+F+ RLR E
Sbjct: 62 FRNSVLKYYYSNNLHITSTRRSIEDNLFLTLADLFVNITTQKKRSGVIPPKRFVERLRYE 121
Query: 302 KDEFDNYMQQDAHEFLNFLINHINE 326
+ F +M QDAHEFLN L+N + E
Sbjct: 122 NEIFRGHMHQDAHEFLNVLLNSVAE 146
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 58/74 (78%)
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
T++H+IF+GILT+ETKCL CE++++KDE F DL +DI QNTSIT CL FSS E L ++
Sbjct: 323 TFIHDIFEGILTNETKCLTCESITNKDESFLDLSIDIDQNTSITSCLSNFSSVEILSKND 382
Query: 190 KFKCDNCASYQEAQ 203
KF CD C S QEAQ
Sbjct: 383 KFYCDKCISLQEAQ 396
>gi|408398864|gb|EKJ77990.1| hypothetical protein FPSE_01778 [Fusarium pseudograminearum CS3096]
Length = 719
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ +D+A +PDR+Y L
Sbjct: 351 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDNAEDPDRLYEL 410
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K W+LFDD++V+ +D++ + +FFG + T
Sbjct: 411 YAVVVHIGGNAYHGHYVSIIKVPGRGWILFDDEMVEPVDKNFVRNFFG----DKPGMATA 466
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 467 YVLFYQ 472
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDG---------GGGDNHSSS 124
F N M QDAHEF ++N + + S Q ++ + DG G + +
Sbjct: 211 FRNSMHQDAHEFYGLVLNDVINSVESAARQMKLQAPTNGTDGLATSVEHVLGSAMANHVA 270
Query: 125 GFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 271 GASSPATGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSAE 330
Query: 183 ETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 331 EMLCERNKFHCDHCGGLQEAE 351
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 172 ECTFTGLKDIFLALLESNTHTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 230
>gi|46108698|ref|XP_381407.1| hypothetical protein FG01231.1 [Gibberella zeae PH-1]
Length = 719
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ +D+A +PDR+Y L
Sbjct: 351 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDNAEDPDRLYEL 410
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K W+LFDD++V+ +D++ + +FFG + T
Sbjct: 411 YAVVVHIGGNAYHGHYVSIIKVPGRGWILFDDEMVEPVDKNFVRNFFG----DKPGMATA 466
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 467 YVLFYQ 472
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDG---------GGGDNHSSS 124
F N M QDAHEF ++N + + S Q ++ + DG G + +
Sbjct: 211 FRNSMHQDAHEFYGLVLNDVINSVESAARQMKLQAPTNGTDGLANSVEHVLGSAMANHVA 270
Query: 125 GFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 271 GTSSPATGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSAE 330
Query: 183 ETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 331 EMLCERNKFHCDHCGGLQEAE 351
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 172 ECTFTGLKDIFLALLESNTHTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 230
>gi|342890391|gb|EGU89209.1| hypothetical protein FOXB_00162 [Fusarium oxysporum Fo5176]
Length = 734
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ +D+A +PDR+Y L
Sbjct: 363 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDNAEDPDRLYEL 422
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K W+LFDD++V+ +D++ + +FFG + T
Sbjct: 423 YAVVVHIGGNAYHGHYVSIIKVPGRGWILFDDEMVEPVDKNFVRNFFG----DKPGMATA 478
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 479 YVLFYQ 484
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 82/141 (58%), Gaps = 11/141 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDG---------GGGDNHSSS 124
F N M QDAHEF ++N + + S Q ++ DG G + +
Sbjct: 223 FRNSMHQDAHEFYGLVLNDVINSVESTARQMQLQAPADGIDGLATSVGHALGSAMVNHVA 282
Query: 125 GFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
G P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR FS+
Sbjct: 283 GSSSPATGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLRKFSAE 342
Query: 183 ETLCSDNKFKCDNCASYQEAQ 203
E LC NKF CD+C QEA+
Sbjct: 343 EMLCERNKFHCDHCGGLQEAE 363
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 180 SSTETLCSDNKFKCDNCASYQEAQGPNISALEKEI---GPDRFPPNERYFGLVNFGNTCY 236
S T T + NK D A +E +++ LEK + P R +R+FGL NFGNTCY
Sbjct: 11 SGTATTTTPNK--QDVVAKKKEEPVLDLTPLEKMLQNAAPLRDDGADRFFGLENFGNTCY 68
Query: 237 SNSVLQALYFCKPFRDRVLEY 257
NS++QAL++ + FR+ V+ Y
Sbjct: 69 CNSIVQALFYSESFRNNVVNY 89
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E + L D+F + G ++P++F+ +++ + F N M QDAHEF ++N +
Sbjct: 184 ECTFTGLKDIFLALLESNTHTGVLSPQRFLEIFKRDNEMFRNSMHQDAHEFYGLVLNDV 242
>gi|388580652|gb|EIM20965.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 304
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 87/129 (67%), Gaps = 8/129 (6%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDD---AVNPDRM 382
EK M++KKLP ILALHLKRFKY + +R++K+S+RV FP L LS A N D+M
Sbjct: 180 EKWMRIKKLPNILALHLKRFKYQEDQSRYIKLSYRVAFPFLLEPGSLSSTCQGAENSDKM 239
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
Y L AV+IH GSGP+ GHY+SI+KS+D W+LFDDD V +D+ + FFG +
Sbjct: 240 YRLFAVIIHIGSGPHHGHYVSIIKSYDRWVLFDDDKVSVVDEHELSKFFG-----NDPAG 294
Query: 443 TGYILFYQS 451
GY+ FY++
Sbjct: 295 EGYVFFYET 303
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 31/144 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + QDAHEFLN+L+N + E + S+ T VH
Sbjct: 75 FRSTTHQDAHEFLNYLLNRVAEDLTRLTKSSH------------------------TLVH 110
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G LT+ETKC+ CE ++ +DE F DL +++++++++T+CL FS E LC NKF C
Sbjct: 111 SLFEGTLTNETKCMTCENITHRDESFLDLSINVEEDSNVTECLSNFSVREMLCQKNKFFC 170
Query: 194 DNCASYQEAQG-------PNISAL 210
D+C QEA+ PNI AL
Sbjct: 171 DSCGGLQEAEKWMRIKKLPNILAL 194
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 230 NFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSI 289
N GN+CY NSVLQ+LYFC+P R+ VL + K+ T+L LF +I+T K+ G I
Sbjct: 3 NLGNSCYCNSVLQSLYFCRPLRELVLALPSDVDKSMYTVLR---GLFQDISTQPKRTGVI 59
Query: 290 APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
K F+ +LR+E + F + QDAHEFLN+L+N + E ++ K
Sbjct: 60 QTKSFVEKLRQENELFRSTTHQDAHEFLNYLLNRVAEDLTRLTK 103
>gi|302925587|ref|XP_003054125.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735066|gb|EEU48412.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 703
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/126 (49%), Positives = 87/126 (69%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MKVK+LP IL LHLKRFKY + +R K+ HRVV+P LR+F+ ++DA +PDR+Y L
Sbjct: 327 EKRMKVKRLPKILTLHLKRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTEDAGDPDRLYEL 386
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GHY+SI+K W+LFDD++V+ +D++ + +FFG + T
Sbjct: 387 YAVVVHIGGNAYHGHYVSIIKVPGRGWVLFDDEMVEPVDKNFVRNFFG----DKPGMATA 442
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 443 YVLFYQ 448
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 87/146 (59%), Gaps = 21/146 (14%)
Query: 74 FDNYMQQDAHEFLNFLINH-INEVILSERPQSNAKSKLSAP----DG---------GGGD 119
F N M QDAHEF ++N IN V + R K L AP DG G
Sbjct: 187 FRNSMHQDAHEFYGLVLNDVINSVEATAR-----KMHLQAPADGLDGLANSVGHALGSAM 241
Query: 120 NHSSSGFEEPT--WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLR 177
+++SG P WVH+IF+G+LTSETKCL CET S +DE F DL +D+++++S+T CLR
Sbjct: 242 VNNASGASSPGTGWVHDIFEGVLTSETKCLTCETASQRDETFLDLSIDLEEHSSVTSCLR 301
Query: 178 GFSSTETLCSDNKFKCDNCASYQEAQ 203
FS+ E LC NKF CD+C QEA+
Sbjct: 302 KFSAEEMLCERNKFHCDHCGGLQEAE 327
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 65/201 (32%)
Query: 189 NKFKCDNCAS---------YQEAQGP--NISALEKEI---GPDRFPPNERYFGLVNFGNT 234
NK K N AS ++ + P +++ LEK + GP R +R+FGL NFGNT
Sbjct: 6 NKIKGSNTASSSPSHKDAVTKKKEEPILDLTPLEKMLQNAGPLRDDGTDRFFGLENFGNT 65
Query: 235 CY-----------------------SNSVL---QALYFCKPFRDRVL--------EYKAK 260
CY ++ V+ QA+ P + V EYK K
Sbjct: 66 CYFPITIRPPPTDPVVNLPKQKGLSTSQVIKQRQAMNHQLPGQVGVRPEDKPDTPEYKKK 125
Query: 261 NKKNKETLL-----------------SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKD 303
K +L + L D+F + G ++P++F+ +++ +
Sbjct: 126 QAMIKGPILELAKENSAAYGMDECTFTGLKDIFLALLESNTHTGVLSPQRFLEIFKRDNE 185
Query: 304 EFDNYMQQDAHEFLNFLINHI 324
F N M QDAHEF ++N +
Sbjct: 186 MFRNSMHQDAHEFYGLVLNDV 206
>gi|154275196|ref|XP_001538449.1| hypothetical protein HCAG_06054 [Ajellomyces capsulatus NAm1]
gi|150414889|gb|EDN10251.1| hypothetical protein HCAG_06054 [Ajellomyces capsulatus NAm1]
Length = 746
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 81/107 (75%), Gaps = 1/107 (0%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DD +PDR+Y L
Sbjct: 301 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDTEDPDRLYEL 360
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFF 431
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +F
Sbjct: 361 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVRNFL 407
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 57/130 (43%), Gaps = 45/130 (34%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F M QDAHEFLN L+N + + A+++ S P
Sbjct: 217 FRTAMHQDAHEFLNLLLNEVVANV-------EAEAERSLPP------------------- 250
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EI Q SE+ DL VD+ Q++S+T CLR FS E LC NKF C
Sbjct: 251 EIDQ---QSES----------------DLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHC 291
Query: 194 DNCASYQEAQ 203
DNC QEA+
Sbjct: 292 DNCGGLQEAE 301
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQ 310
RD + Y + E+L + L D+F I ++++G I P F+ LR+E + F M
Sbjct: 168 RDNAMSYGMQ-----ESLFTSLKDIFEAIVATQERMGVIRPYSFLEVLRREHEMFRTAMH 222
Query: 311 QDAHEFLNFLINHI 324
QDAHEFLN L+N +
Sbjct: 223 QDAHEFLNLLLNEV 236
>gi|166240229|ref|XP_635735.2| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988494|gb|EAL62242.2| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 475
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KKLP L +HLKRFKYM+ + ++ K+++RVVFP E+ + + + + PD+ +NL
Sbjct: 342 QKRMKIKKLPNTLIIHLKRFKYMENIQQYTKLNYRVVFPFEIIIQNTTSNIDEPDKKFNL 401
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIH GSGPN GHY S++K H W +FDD +D ++S I D FG S ++ +++ Y
Sbjct: 402 FAVVIHVGSGPNHGHYYSLIKCHGVWFVFDDHHIDIREESDIYDCFG--SSNEFNNDCSY 459
Query: 446 ILFYQSRDST 455
+LFYQ DS+
Sbjct: 460 LLFYQCEDSS 469
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 79/130 (60%), Gaps = 12/130 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F ++M QDAHEFLNFL+N I E + ++ + + T VH
Sbjct: 225 FSSFMHQDAHEFLNFLLNSIAEFLQKQQKNKQPQQSSEKKECN------------KTLVH 272
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EIF+G LT+ETKCL CE++++KDE F DL +DI+QN S+T CL FSS E L ++KF C
Sbjct: 273 EIFEGTLTNETKCLTCESITNKDESFLDLSIDIEQNKSLTNCLSNFSSIEILSKNDKFFC 332
Query: 194 DNCASYQEAQ 203
D C S QEAQ
Sbjct: 333 DQCNSLQEAQ 342
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/52 (65%), Positives = 40/52 (76%), Gaps = 3/52 (5%)
Query: 208 SALEK--EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
S LEK E PD FP N++ FGL NFGNTCY NSVLQ LYFC PFR+++L+Y
Sbjct: 8 SDLEKLYEKYPD-FPKNQKLFGLENFGNTCYCNSVLQVLYFCVPFRNKILQY 58
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 260 KNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNF 319
+N++ + L+ L +LF+ I +K+ G + P+ F+ RL+KE + F ++M QDAHEFLNF
Sbjct: 180 RNQEKEGNLIINLGELFYTIHQNKETHGCLKPETFVERLKKENELFSSFMHQDAHEFLNF 239
Query: 320 LINHINE 326
L+N I E
Sbjct: 240 LLNSIAE 246
>gi|19112999|ref|NP_596207.1| ubiquitin C-terminal hydrolase Ubp9 [Schizosaccharomyces pombe
972h-]
gi|24638333|sp|Q9P7V9.1|UBP9_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 9;
AltName: Full=Deubiquitinating enzyme 9; AltName:
Full=Ubiquitin thioesterase 9; AltName:
Full=Ubiquitin-specific-processing protease 9
gi|6723926|emb|CAB66456.1| ubiquitin C-terminal hydrolase Ubp9 [Schizosaccharomyces pombe]
Length = 585
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP IL+LHLKRFKY + H K+ + +VF E+RLF ++DA N +RMY L
Sbjct: 301 EKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAERMYYL 360
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V++H G GP+RGHY+SIV++ + W+LFDD+ V ++++ ++ FFG Q T
Sbjct: 361 SSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFFG----DQPGQATA 416
Query: 445 YILFYQSRDSTD 456
Y+LFY + D D
Sbjct: 417 YVLFYTAADEED 428
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 19/132 (14%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
+ F + QQDAHEF NFL+N + E + D G NHS P W
Sbjct: 189 EAFRSTQQQDAHEFFNFLLNSVTETL----------------DEYYG-NHS--DVMHPKW 229
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
VH +F+G LTSETKCL CE ++S+DE F DL +DI+ +TS+T CLR FS++E L S NKF
Sbjct: 230 VHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHTSVTSCLRSFSASEMLSSKNKF 289
Query: 192 KCDNCASYQEAQ 203
CD C S QEA+
Sbjct: 290 HCDVCKSLQEAE 301
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE + +CL DL+ +++ + G +P++FI LR++ + F + QQDAHEF NFL+N +
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSV 210
Query: 325 NE 326
E
Sbjct: 211 TE 212
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 194 DNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDR 253
D S EA+ P S I P+ +R++GL N+GNTCY +SVL +LY KPFRD
Sbjct: 16 DRRKSTWEAELPKPS-----IRPETL--TDRFYGLTNYGNTCYVSSVLVSLYHLKPFRDS 68
Query: 254 VLEY 257
+ Y
Sbjct: 69 LNSY 72
>gi|330797555|ref|XP_003286825.1| hypothetical protein DICPUDRAFT_77679 [Dictyostelium purpureum]
gi|325083198|gb|EGC36657.1| hypothetical protein DICPUDRAFT_77679 [Dictyostelium purpureum]
Length = 486
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 2/123 (1%)
Query: 328 CMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVA 387
C K KKLP L +HLKRFKY + + ++ K+++RVVFP E + + + D + DR YNL A
Sbjct: 361 CDKYKKLPNTLIIHLKRFKYSETVQQYTKLNYRVVFPFETIIQNTTSDLKDYDRKYNLFA 420
Query: 388 VVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYIL 447
VVIH GSGPNRGHY S++K H W LFDDD +D +++ I + FG S ++ S++ GY+L
Sbjct: 421 VVIHVGSGPNRGHYYSLIKCHGVWFLFDDDNIDIREEADIHECFG--SSNEFSNDCGYLL 478
Query: 448 FYQ 450
FYQ
Sbjct: 479 FYQ 481
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 79/122 (64%), Gaps = 6/122 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSA-PDGGGGDNHSSSGFEEPTWV 132
F NY QDAHEFLNFL+N I E + ++ Q + + PD + E ++V
Sbjct: 246 FSNYNHQDAHEFLNFLLNSIAEYLQKQQKQQQQQQEKDQEPDQKDEEKK-----EFKSFV 300
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
HEIF+GILT+ETKCL CE++++KDE F DL +DI++N S+T CL FSS E L +NKF
Sbjct: 301 HEIFEGILTNETKCLTCESITNKDESFLDLSIDIEKNKSLTSCLSNFSSVEVLSKNNKFF 360
Query: 193 CD 194
CD
Sbjct: 361 CD 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 34/44 (77%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
FP +++ FG NFGNTCY NSVLQ LYFC PFR+R+L+Y + K
Sbjct: 20 FPRSQKLFGFENFGNTCYCNSVLQVLYFCVPFRNRLLKYYCEVK 63
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+E L+ L +LF+ I ++ G + P++F+ RL++E + F NY QDAHEFLNFL+N I
Sbjct: 206 EENLIIHLGELFYTIHQNRDTYGCLKPERFVDRLKRENEMFSNYNHQDAHEFLNFLLNSI 265
Query: 325 NE 326
E
Sbjct: 266 AE 267
>gi|290993516|ref|XP_002679379.1| predicted protein [Naegleria gruberi]
gi|284092995|gb|EFC46635.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-TLLSCLADLFHNIA 280
NE+YFGL NFGNTCY+NSVLQALYFCKPFR+ +L Y +N E LL LADLF+ +
Sbjct: 34 NEKYFGLENFGNTCYANSVLQALYFCKPFRNHILNYYKTIPQNSEPNLLVSLADLFYQLN 93
Query: 281 THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
KKK G + PK FI RLR + + F + MQQDA EFLN+L+NH E
Sbjct: 94 NQKKKTGYLGPKAFIQRLRLDNEMFKSLMQQDAQEFLNYLLNHFVE 139
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 42/215 (19%)
Query: 19 NERYFGLVN-GKTC------------KEKEDRI--------EKSQP---------FWEQT 48
NE+YFGL N G TC K + I + S+P F++
Sbjct: 34 NEKYFGLENFGNTCYANSVLQALYFCKPFRNHILNYYKTIPQNSEPNLLVSLADLFYQLN 93
Query: 49 SLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKS 108
+ + K + I L L ++ F + MQQDA EFLN+L+NH E++ E
Sbjct: 94 NQKKKTGYLGPKAFIQRLRL-DNEMFKSLMQQDAQEFLNYLLNHFVEILQHE-------- 144
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
L + DN + T++H+IF+G L +ET+C+ CE V+S++E F DL VD++Q
Sbjct: 145 -LKNQESQTNDNEDLKKLK--TFIHDIFEGTLINETRCIMCENVTSREESFLDLSVDVQQ 201
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+SITQCL+ FS + L S+NKF CD C S+QEAQ
Sbjct: 202 YSSITQCLKNFSGMQILKSNNKFYCDRCCSHQEAQ 236
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
MK+K+ P +LA+ LKRFKYM+ N K+S+RV FP + +L +LS D + Y L A
Sbjct: 239 MKIKRQPQVLAIQLKRFKYMN--NNFKKLSYRVTFPFDFKLPNLSQDE--KVKTYKLFAA 294
Query: 389 VIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS----SETG 444
V+H GSGPN GHY I++S + W LFDDD V +D+ ++ FG D S SET
Sbjct: 295 VVHIGSGPNCGHYKCIIRSEERWFLFDDDKVSNVDEDYVKSTFGFPHDEASSFSGISETC 354
Query: 445 YILFYQS 451
YILFY S
Sbjct: 355 YILFYSS 361
>gi|3213207|gb|AAC23450.1| deubiquitinating enzyme [Mus musculus]
Length = 176
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 70/89 (78%)
Query: 115 GGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
G DN ++ +PTWVHEIFQG LT+ET+CL CET+SSKDEDF DL VD++QNTSIT
Sbjct: 9 NGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITH 68
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 69 CLRGFSNTETLCSEYKYYCEECRSKQEAH 97
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 60/65 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 98 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 157
Query: 387 AVVIH 391
AVV+H
Sbjct: 158 AVVVH 162
>gi|164658850|ref|XP_001730550.1| hypothetical protein MGL_2346 [Malassezia globosa CBS 7966]
gi|159104446|gb|EDP43336.1| hypothetical protein MGL_2346 [Malassezia globosa CBS 7966]
Length = 650
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 96/144 (66%), Gaps = 7/144 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD+ M DAHEFLNF++N + + ++ +R + + +++ + S + + PT++H
Sbjct: 230 FDSSMHHDAHEFLNFILNQVGQNLMDKRKRRSQRAREQSFTPLTPSFSSPTVKDHPTYIH 289
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++FQG+LT+ET+CL+CET++++DE+F DL ++++ NTS++ LR FS +E L NKF C
Sbjct: 290 KLFQGVLTNETRCLSCETITNRDEEFLDLSINVEANTSVSSSLRQFSESEMLSGRNKFYC 349
Query: 194 DNCASYQEA-------QGPNISAL 210
D C+S QEA Q PNI AL
Sbjct: 350 DTCSSLQEAEKRMKIKQPPNILAL 373
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 92/147 (62%), Gaps = 13/147 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+ P ILALHLKRFK+ D +VK + RVVFPL +RLF+ + A PD++Y+L
Sbjct: 359 EKRMKIKQPPNILALHLKRFKWDDMRQAYVKHACRVVFPLNMRLFNTTHQATQPDQLYDL 418
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG- 444
+V+H GSG ++GHY+SI+K W +FDD+ V I +S I +FG + E G
Sbjct: 419 FGIVVHIGSGAHQGHYVSIIKIGARWAIFDDEDVTFIPESDIPKYFG------DAPEVGS 472
Query: 445 -YILFYQSRDSTDARTMNSNDCRVNGS 470
Y+LFYQ+ D D D RVN S
Sbjct: 473 AYVLFYQAIDEPDLF-----DARVNDS 494
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 45/153 (29%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK---------------AKNKKNKETLLS 270
G+ NFGN+CY+NSVLQALY+CKPFRD V+ A K T +S
Sbjct: 106 LGMENFGNSCYANSVLQALYYCKPFRDAVMSVDKSPHPSPLPSLQDGLASEKTLASTPVS 165
Query: 271 -----CLADLFHNIATHKKKV------GSI-------AP------------KKFITRLRK 300
LA LFH+IA ++ G I AP K F++ L +
Sbjct: 166 MNMKDALAALFHSIALASVRLSADASNGRIHSSSMLEAPAILSQNVDAGALKMFLSTLHQ 225
Query: 301 EKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ FD+ M DAHEFLNF++N + + M +K
Sbjct: 226 NCNLFDSSMHHDAHEFLNFILNQVGQNLMDKRK 258
>gi|449016168|dbj|BAM79570.1| ubiquitin-specific protease [Cyanidioschyzon merolae strain 10D]
Length = 446
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 102/148 (68%), Gaps = 10/148 (6%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNR--HVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
EK M ++++P +LALHLKRFK+++ + + K+++R+ FP+ELR+ ++SDDA + D +Y
Sbjct: 295 EKRMLIRRVPQVLALHLKRFKFLEANMKLLYKKLNYRISFPMELRVCNVSDDAEDVDGLY 354
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK--- 439
L +VV+H G+GP+ GHY+++ KS W+L+DDD V+ ++ ++++ FG++ Q
Sbjct: 355 ELFSVVVHVGAGPSHGHYVTLAKSSGGIWMLYDDDQVEVVEDYSLQEVFGISESGQSVTG 414
Query: 440 --SSETGYILFYQSRDSTDARTMNSNDC 465
SS+ GYILFY RD+ + +NDC
Sbjct: 415 SCSSDCGYILFYIRRDAESSN--GANDC 440
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 85/134 (63%), Gaps = 7/134 (5%)
Query: 70 SSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP 129
+SD F YM D+HEFLNFL+N +E++ E S+ P GG SS +
Sbjct: 169 TSDLFAGYMHHDSHEFLNFLLNQCSELLKEEHRMHLLASE---PSQGG----VSSEEQFT 221
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
T+V IFQG L +ET+CL CET++ ++E F DL +DI+Q++SI+ CLR FS+ E L S +
Sbjct: 222 TFVERIFQGELVNETRCLGCETITRREEHFLDLSLDIEQHSSISACLRNFSAHEMLRSGD 281
Query: 190 KFKCDNCASYQEAQ 203
KF C+ C + QEA+
Sbjct: 282 KFYCNVCRTLQEAE 295
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 72/170 (42%), Gaps = 66/170 (38%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-------------------------- 256
ERY GLVN+GNTCY+NS++QALYFC+PFR VL
Sbjct: 25 ERYCGLVNYGNTCYANSIIQALYFCEPFRREVLTFFAELQRRRERGRRTKSGVALGDLIP 84
Query: 257 ----YKAKNKKNKETLLSCLADLFHNIATHKKK--------------------------- 285
Y+ +E +L+ LADLF + K K
Sbjct: 85 DNYPYRNNQAGYRENVLTALADLFAELHGLKGKNSNGPVVSVSVAALARHSPNTGVLDGT 144
Query: 286 ---------VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
G + P+ FI R+R+ D F YM D+HEFLNFL+N +E
Sbjct: 145 VLAPQTATYTGLVEPRNFIARVRQTSDLFAGYMHHDSHEFLNFLLNQCSE 194
>gi|154309531|ref|XP_001554099.1| hypothetical protein BC1G_07236 [Botryotinia fuckeliana B05.10]
Length = 773
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K LP +L LHLKRFK+ D + R K+ + V +P LR+F+ +DDA +PDR+Y L
Sbjct: 363 EKRMKIKTLPKVLVLHLKRFKWTDDLTRLQKLFYTVNYPYHLRMFNTTDDAEDPDRLYEL 422
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G+ GHY++++K+ D WLLFDD++V+ +D+S + FFG +
Sbjct: 423 YAVVVHIGTNAFHGHYVAVIKTEDRGWLLFDDEMVEPVDKSFVRQFFG----DKPGQACA 478
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 479 YVLFYR 484
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 90/155 (58%), Gaps = 17/155 (10%)
Query: 64 LELDLCSSDEFDNYMQQDAHEF----LNFLINHI--------NEVILSERPQSNAKSKLS 111
LE+ ++ F M QDAHEF LN +IN++ + V L E+ N ++
Sbjct: 211 LEVFRRDNEMFRTSMHQDAHEFYGLMLNAVINNVEDNARHLKDSVALQEKEGLN--DSMT 268
Query: 112 APDGGGGDNHS-SSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
A D+ +SG + P WVH+IF+G + SETKCL CET S +DE F DL +D+++
Sbjct: 269 AAVRSVADSMGLASGAQSPGTKWVHDIFEGKMVSETKCLTCETTSQRDETFLDLSIDLEK 328
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
N+S+T CL+ FS+ E LC NKF CD C QEA+
Sbjct: 329 NSSVTSCLQKFSAEEMLCEKNKFHCDTCGGLQEAE 363
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF----LNFL 320
+ET + L D+F + +H + G ++P++F+ R++ + F M QDAHEF LN +
Sbjct: 181 EETTFTALKDIFAAMISHPSRTGVVSPQRFLEVFRRDNEMFRTSMHQDAHEFYGLMLNAV 240
Query: 321 INHINEKCMKVK 332
IN++ + +K
Sbjct: 241 INNVEDNARHLK 252
>gi|347838295|emb|CCD52867.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 774
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 85/126 (67%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K LP +L LHLKRFK+ D + R K+ + V +P LR+F+ +DDA +PDR+Y L
Sbjct: 364 EKRMKIKTLPKVLVLHLKRFKWTDDLTRLQKLFYTVNYPYHLRMFNTTDDAEDPDRLYEL 423
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G+ GHY++++K+ D WLLFDD++V+ +D+S + FFG +
Sbjct: 424 YAVVVHIGTNAFHGHYVAVIKTEDRGWLLFDDEMVEPVDKSFVRQFFG----DKPGQACA 479
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 480 YVLFYR 485
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 83/144 (57%), Gaps = 15/144 (10%)
Query: 74 FDNYMQQDAHEF----LNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNH 121
F M QDAHEF LN +IN++ + V L E+ N S +A
Sbjct: 222 FRTSMHQDAHEFYGLMLNAVINNVEDNARHLKDSVALQEKEGLN-DSMTAAVRSVADSMG 280
Query: 122 SSSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
+SG + P WVH+IF+G + SETKCL CET S +DE F DL +D+++N+S+T CL+ F
Sbjct: 281 LASGAQSPGTKWVHDIFEGKMVSETKCLTCETTSQRDETFLDLSIDLEKNSSVTSCLQKF 340
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S+ E LC NKF CD C QEA+
Sbjct: 341 SAEEMLCEKNKFHCDTCGGLQEAE 364
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Query: 205 PNISALEKEI---GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
P I+ L K + GP R ++++FGL NFGNTCY+NS+LQALY+ PFR+ V++Y
Sbjct: 29 PEITPLVKMLQNAGPIRPDGSDKFFGLENFGNTCYANSILQALYYSVPFRENVVKY 84
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF----LNFL 320
+ET + L D+F + +H + G ++P++F+ R++ + F M QDAHEF LN +
Sbjct: 182 EETTFTALKDIFAAMISHPSRTGVVSPQRFLEVFRRDNEMFRTSMHQDAHEFYGLMLNAV 241
Query: 321 INHINEKCMKVK 332
IN++ + +K
Sbjct: 242 INNVEDNARHLK 253
>gi|385306037|gb|EIF49974.1| ubiquitin c-terminal hydrolase [Dekkera bruxellensis AWRI1499]
Length = 688
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KK+P ILALHLKRFKY +K+ R VK+ +RV + +R+F+ +DDA D++Y L
Sbjct: 502 KTIKLKKVPKILALHLKRFKYSEKLGRMVKLFYRVEYTKTIRIFNTTDDAEASDKLYELY 561
Query: 387 AVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G GP GHY+S+V++ F WLLFDD+ V+ ID+S + FFG T Y
Sbjct: 562 AIVVHIGGGPYHGHYVSMVRTPKFGWLLFDDETVESIDESFVFRFFG----DGPGLSTAY 617
Query: 446 ILFYQ 450
+LFY
Sbjct: 618 LLFYH 622
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 77/129 (59%), Gaps = 8/129 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F M QDAHE LNF++N + E + +A+++ AP G D + + +
Sbjct: 380 FRGAMHQDAHELLNFVVNSVIETV-----GEDARAR-GAPTGX--DXGAGASAHAADAIG 431
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F GJLTSET CL CE VS++DE F DL +D++ NTS+T CLR FS +E L NKF C
Sbjct: 432 AMFSGJLTSETXCLTCENVSTRDERFLDLSIDLQPNTSLTNCLRMFSHSEMLSGSNKFFC 491
Query: 194 DNCASYQEA 202
+ C S QEA
Sbjct: 492 ETCHSLQEA 500
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+++ FG+ N+G TCY NS++QALY R +LEY ++
Sbjct: 122 SDKIFGMENYGYTCYINSIMQALYHTGELRKAILEYPPRD 161
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ ++ + + D F +A + K G ++ + ++K+ F M QDAHE LNF++N +
Sbjct: 340 RPSVFTSVKDAFEAMAENSAKKGVLSAYYLLDMVKKKNANFRGAMHQDAHELLNFVVNSV 399
Query: 325 NE 326
E
Sbjct: 400 IE 401
>gi|328876351|gb|EGG24714.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 384
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KKLP L +HLKRFK++++ + K+++RVVFP E+ + + ++ PD+ Y+L
Sbjct: 230 QKRMKIKKLPNTLIIHLKRFKFVEQYQQFQKLNYRVVFPFEIIIQNTTNTIEEPDKKYHL 289
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVVIH G+GPN GHY S+VKS+ W+ FDD+ + I +S I + FG + +E GY
Sbjct: 290 FAVVIHAGNGPNHGHYTSMVKSNGHWIGFDDENMGIIPESDIFEIFGSQQELVGRNECGY 349
Query: 446 ILFYQSRDSTDARTMNS 462
+LFYQ+ +S + + S
Sbjct: 350 LLFYQTEESLNEKQFKS 366
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 83/140 (59%), Gaps = 20/140 (14%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK--- 260
G S EK++ P +ER++GL NFGNTCY NSVLQALY C PFR+ +LEY K
Sbjct: 2 GIGASRFEKDLLSTSIPESERFYGLENFGNTCYCNSVLQALYHCIPFRNSILEYYYKNGL 61
Query: 261 ----NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
N+K+ + L LADLF NI+ KK+ G + P+K +M QDAHEF
Sbjct: 62 HLPQNRKSTDNLFLALADLFVNISQQKKRTGVVPPRK-------------GHMHQDAHEF 108
Query: 317 LNFLINHINEKCMKVKKLPM 336
LNFL+N I+E K++K M
Sbjct: 109 LNFLMNSISEHLGKMEKKKM 128
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/229 (37%), Positives = 115/229 (50%), Gaps = 26/229 (11%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWE---QTSLQDKI 54
G S EK++ P +ER++GL N G TC + PF + ++ +
Sbjct: 2 GIGASRFEKDLLSTSIPESERFYGLENFGNTCYCNSVLQALYHCIPFRNSILEYYYKNGL 61
Query: 55 SLGWECSLILELDLCSSDEFDN----------------YMQQDAHEFLNFLINHINEVI- 97
L L L +D F N +M QDAHEFLNFL+N I+E +
Sbjct: 62 HLPQNRKSTDNLFLALADLFVNISQQKKRTGVVPPRKGHMHQDAHEFLNFLMNSISEHLG 121
Query: 98 -LSERPQSNAKSKLSAPDGGGGDNHSSSGFEE--PTWVHEIFQGILTSETKCLNCETVSS 154
+ ++ N+K+ S + EIF+GILT+ETKCL CE+++S
Sbjct: 122 KMEKKKMENSKATNSKSFNSSNQQQQQQQSTKNEEKKEEEIFEGILTNETKCLTCESITS 181
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
KDE F DL +DI+QNTSIT CL FSS ETL ++KF CD C S QEAQ
Sbjct: 182 KDESFLDLSIDIQQNTSITSCLSNFSSVETLSKNDKFFCDKCISLQEAQ 230
>gi|320582180|gb|EFW96398.1| Putative ubiquitin carboxyl-terminal hydrolase [Ogataea
parapolymorpha DL-1]
Length = 945
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 90/131 (68%), Gaps = 5/131 (3%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP ILALHLKRFKY +++ R+VK+ +RV + LR+F+ ++ + D+MY L
Sbjct: 401 KTIKLKKLPKILALHLKRFKYAEELGRNVKLFYRVEYTKTLRIFNTTEGSEYADKMYELY 460
Query: 387 AVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H G GP+ GHY++IVK+ F WLLFDD+ V+ +D++ + FFG T Y
Sbjct: 461 AVVVHIGGGPSHGHYVAIVKTDRFGWLLFDDETVECVDENFVYRFFG----DGPGLATAY 516
Query: 446 ILFYQSRDSTD 456
+LFY+ ++ D
Sbjct: 517 LLFYREVENED 527
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 22/129 (17%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLNFL+N++ E + DN+ ++ E T +H
Sbjct: 293 FRSSMHQDAHEFLNFLVNNVIEAL---------------------DNYCNATGAE-TDIH 330
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G+LTSETKCL+CETVS++DE F DL +D++ NTSIT CL+ FS +E L NKF C
Sbjct: 331 RLFEGLLTSETKCLSCETVSTRDELFLDLSIDLQPNTSITHCLKMFSQSEMLTESNKFYC 390
Query: 194 DNCASYQEA 202
++C S QEA
Sbjct: 391 ESCHSLQEA 399
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
ET+ + L D+F + + KVG ++ ++ + ++KE + F + M QDAHEFLNFL+N++
Sbjct: 254 ETIFTALKDVFECVTENVSKVGIVSAQQLVEVVKKENEMFRSSMHQDAHEFLNFLVNNVI 313
Query: 326 E 326
E
Sbjct: 314 E 314
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN 264
+++ FG+ NFG TCY S+LQ LY+ FR ++L + ++ +
Sbjct: 65 SDKVFGMENFGYTCYIASILQTLYYTTSFRHQILAFPERDAAH 107
>gi|328767948|gb|EGF77996.1| hypothetical protein BATDEDRAFT_13604 [Batrachochytrium
dendrobatidis JAM81]
Length = 313
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 91/147 (61%), Gaps = 14/147 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+N MQQDAHE N+L+N I E++L+++ + +A + + + PTW+H
Sbjct: 85 FNNTMQQDAHEMFNYLLNAIAEILLNQKTEMHANIQYVYLFTLVKEQTA------PTWIH 138
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F+G LT+ETKCLNCE+++++ E F DL +DI Q++SI+ CLR FSS+E L NKF C
Sbjct: 139 ALFEGQLTNETKCLNCESITNRVESFLDLSIDIDQHSSISSCLRNFSSSEVLYGKNKFFC 198
Query: 194 DNCASYQEAQGPNISALEKEIGPDRFP 220
D C S QEA EK + R P
Sbjct: 199 DTCNSLQEA--------EKRMKIKRLP 217
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 74/94 (78%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP +LA+HLKRFK+ +++ R+ K+S++V FPLELRLF+ +D A N DR+Y L
Sbjct: 208 EKRMKIKRLPNVLAVHLKRFKFQEQLGRYSKLSYQVSFPLELRLFNTADGAENADRLYQL 267
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVV 419
VV+H GS P GHY++++KS + W+LFDDD V
Sbjct: 268 HGVVVHIGSSPQSGHYVALIKSENQWMLFDDDDV 301
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 6/108 (5%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY----KAKNKKNKETLLSCLADLFHN 278
ERY+G NFGNTCY NSVLQ LYFCKPFR+ V+ Y A+N +N ++L + +LF
Sbjct: 1 ERYYGFENFGNTCYCNSVLQVLYFCKPFRNCVVCYNFPESAENAQN--SILHAMQELFVA 58
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
I+T KK+ G +P+ FI++L++E + F+N MQQDAHE N+L+N I E
Sbjct: 59 ISTQKKRTGVFSPRYFISKLKEENELFNNTMQQDAHEMFNYLLNAIAE 106
>gi|254565965|ref|XP_002490093.1| Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific
proteas [Komagataella pastoris GS115]
gi|238029889|emb|CAY67812.1| Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific
proteas [Komagataella pastoris GS115]
gi|328350495|emb|CCA36895.1| hypothetical protein PP7435_Chr1-0754 [Komagataella pastoris CBS
7435]
Length = 564
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 85/125 (68%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
+ + +KKLP +LALHLKRFKY + + R+VK+ HR+ + LR+F+ ++D+V D++Y L
Sbjct: 420 RTVNLKKLPKVLALHLKRFKYEEALQRNVKLFHRIAYTKTLRVFNTTEDSVELDKLYELY 479
Query: 387 AVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AV++H G GP GHY+S++K+ F WLLFDD+ V+ I++ + FFG T Y
Sbjct: 480 AVIVHIGGGPYHGHYVSLIKTPFFGWLLFDDETVEAINEDYVLRFFG----DGVGLATAY 535
Query: 446 ILFYQ 450
+LFYQ
Sbjct: 536 VLFYQ 540
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 71/129 (55%), Gaps = 30/129 (23%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLNF+IN I E EE +
Sbjct: 320 FRSSMHQDAHEFLNFVINSITET------------------------------EEGSTFQ 349
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
IF+G+LTSETKCL CET+SS+DE F DL +D+ +++SIT CL+ FS E L NKF C
Sbjct: 350 GIFEGLLTSETKCLACETISSRDEKFLDLSIDLTKDSSITNCLKNFSQMEMLNGSNKFYC 409
Query: 194 DNCASYQEA 202
D C S QEA
Sbjct: 410 DTCHSLQEA 418
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
+L + + DLF +A + G ++P K I L+KE + F + M QDAHEFLNF+IN I E
Sbjct: 282 SLFTVMKDLFECMAENTSSYGVVSPVKLIEILKKENELFRSSMHQDAHEFLNFVINSITE 341
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
N++ FG+ NFGNTCY NS+LQ LY+ F++++L Y KN K
Sbjct: 75 NDKIFGMENFGNTCYCNSILQCLYYTSDFKEKMLAYPHKNPK 116
>gi|430812209|emb|CCJ30362.1| unnamed protein product [Pneumocystis jirovecii]
Length = 471
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 88/144 (61%), Gaps = 6/144 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMN--RHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
EKC+K+K+LP IL LHLKRFK ++ + K+ H VV+P LRL ++++D + DR+Y
Sbjct: 210 EKCVKIKRLPEILTLHLKRFKCAEENGDYKFFKLFHTVVYPYHLRLSNIANDVNDSDRLY 269
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AVV+H GSGP GHY+S++K+ W LFDD+ V+ ++ + FFG T
Sbjct: 270 ELYAVVVHLGSGPCHGHYVSVIKTESGWTLFDDERVEPVNDLFVRRFFG----DFPGEAT 325
Query: 444 GYILFYQSRDSTDARTMNSNDCRV 467
Y+LFYQ+ + NS D +
Sbjct: 326 AYVLFYQTVNVDSQDGSNSFDVKT 349
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F N + QDAHEF N+L+N I E I E +SN + + N S+ +
Sbjct: 84 NEHFRNNLHQDAHEFFNYLLNSILESI-EEYDKSNINT-----NSNFISNDKSAQYVSAK 137
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVH IF+G+LTS+T+CL C ++S+DE F DL +D+ +NTS+T CL F + E LC NK
Sbjct: 138 WVHSIFEGLLTSKTQCLTCGNITSRDESFLDLSIDVSKNTSVTSCLNAFFAPEMLCEKNK 197
Query: 191 FKCDNCASYQEAQ 203
F CD C + QEA+
Sbjct: 198 FHCDFCGNLQEAE 210
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE+L +C+ D+F I K G +P +FI LR+E + F N + QDAHEF N+L+N I
Sbjct: 47 KESLFTCVRDIFATIIQSHVKDGICSPTRFIEVLRRENEHFRNNLHQDAHEFFNYLLNSI 106
Query: 325 NE 326
E
Sbjct: 107 LE 108
>gi|307107673|gb|EFN55915.1| hypothetical protein CHLNCDRAFT_35373 [Chlorella variabilis]
Length = 404
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 80/122 (65%), Gaps = 14/122 (11%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK--------NKKNKETLLS 270
P +E YFGL NFGNTCY NSVLQ LYFCKPFR++VL Y A+ + E +L+
Sbjct: 15 LPDDENYFGLENFGNTCYCNSVLQTLYFCKPFREQVLHYGARLQAAAASSKQPPPENMLT 74
Query: 271 CLAD------LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
CLA+ L + KKK G ++P++F++R++ E F +YM QDAHEFLN+L+N I
Sbjct: 75 CLAELFLQARLLLLVNGQKKKCGFVSPRRFVSRVKAENALFSSYMHQDAHEFLNWLLNDI 134
Query: 325 NE 326
+E
Sbjct: 135 SE 136
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 82/136 (60%), Gaps = 6/136 (4%)
Query: 74 FDNYMQQDAHEFLNFLINHINEV------ILSERPQSNAKSKLSAPDGGGGDNHSSSGFE 127
F +YM QDAHEFLN+L+N I+E S L +
Sbjct: 115 FSSYMHQDAHEFLNWLLNDISEARSPTKAAASSSAACARSPSLQLLSQAAAKAAAVRNRP 174
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
TWVH++FQG L +ET+CL CETV+S++EDF+DL ++I QN S+T CLR FSSTETL +
Sbjct: 175 VRTWVHDLFQGKLVNETRCLQCETVTSREEDFYDLSLEIDQNCSLTSCLRNFSSTETLDA 234
Query: 188 DNKFKCDNCASYQEAQ 203
++KF CD C QEAQ
Sbjct: 235 EDKFFCDKCGCLQEAQ 250
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 84/134 (62%), Gaps = 9/134 (6%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++ +LP +L +HLKRFKY++ M R K+ HRV FP EL++ + +DD + D Y L
Sbjct: 250 QKRMRLAQLPPVLCMHLKRFKYIESMGRLKKLMHRVTFPWELKMINTTDDCPDADTAYEL 309
Query: 386 VAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQ------ 438
AVV+H G+ PN GHY+++V++ W+ FDD+ V+ I ++ ++ FG T D
Sbjct: 310 FAVVVHMGAHPNHGHYVALVRTPCGQWVCFDDEQVNAITEAQVQSVFGHTQDWHPMRDDQ 369
Query: 439 --KSSETGYILFYQ 450
++ GYIL YQ
Sbjct: 370 PGPHADHGYILMYQ 383
>gi|443921565|gb|ELU41155.1| ubiquitin hydrolase CreB [Rhizoctonia solani AG-1 IA]
Length = 686
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 89/144 (61%), Gaps = 14/144 (9%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSK-------LSAPDG----GGGDNH 121
E DN M QDAHEFLN+L+N + E + E + + PD G +
Sbjct: 17 ENDN-MHQDAHEFLNYLLNSVVEDLTHEMKAGPPEDREFDRCVVAVVPDSNKVSGSVAST 75
Query: 122 SSSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
SS+ P T VH++F+G LTSET+CL CETVSS+DE F DL +DI++N+S+T CLR F
Sbjct: 76 SSTSNCSPHLTLVHDLFEGTLTSETRCLTCETVSSRDESFLDLSIDIERNSSVTACLRQF 135
Query: 180 SSTETLCSDNKFKCDNCASYQEAQ 203
S++E LC +KF CD+C QEA+
Sbjct: 136 SASEMLCRGDKFFCDSCCGLQEAE 159
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
Query: 368 RLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTI 427
R +L++DA +PDR+Y L A+++H G RG W FDDDVV+ + +S I
Sbjct: 171 RCGNLTNDAEDPDRLYELFAIIVHVGRYCQRGQ----------WFAFDDDVVEPVQESAI 220
Query: 428 EDFFGLTSDHQKSSETGYILFYQS 451
+FG + +GY+LFYQ+
Sbjct: 221 PKYFG-----DSPAGSGYVLFYQA 239
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 4/41 (9%)
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
+G+++P+ F+ +L+KE D M QDAHEFLN+L+N + E
Sbjct: 2 LGTVSPRAFVEKLKKENDN----MHQDAHEFLNYLLNSVVE 38
>gi|412986036|emb|CCO17236.1| predicted protein [Bathycoccus prasinos]
Length = 603
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 86/147 (58%), Gaps = 19/147 (12%)
Query: 323 HINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM 382
H K + ++ P +LALHLKRFKY++ + R K++HRV F EL+L +LS D+ + D +
Sbjct: 436 HEAHKRLLIRTAPSVLALHLKRFKYVESVGRMQKLNHRVAFSRELKLPNLSADSTSSDDL 495
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDF----------WLLFDDDVVDKIDQSTIEDFF- 431
Y L AVV+H GSGPN GHY+ ++ + W++FDD+ V ++ +E F
Sbjct: 496 YCLFAVVVHIGSGPNHGHYVCFARTSGYKASGGGASERWVMFDDETVQDMNTEDLESVFG 555
Query: 432 --GLTSDHQK------SSETGYILFYQ 450
G+ S Q+ SE GYILFYQ
Sbjct: 556 SKGVVSGGQEGDEDAGGSEHGYILFYQ 582
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 88/164 (53%), Gaps = 20/164 (12%)
Query: 178 GFSSTETLCSDNKFKCDNCASYQEAQGPNI-----------SALEKEIGPDRFPPNERYF 226
G SS + +D + K DN S E + N+ S ++ D+ +
Sbjct: 85 GSSSAKASGADRRRKDDN-GSNDENEKNNLKMSDNSEDTIASGMKTNTTSDKNKGASKGV 143
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA------ 280
GL NFGNTCY NSVLQALY C+PF+ +LEY A + LL L LF ++
Sbjct: 144 GLENFGNTCYCNSVLQALYHCQPFKKLLLEYHATQTDSDANLLLSLGGLFAEMSKKEQKA 203
Query: 281 --THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ K+V + PKKF++RL+K + F++Y QDAHEFLN+L+N
Sbjct: 204 LTSSAKRVPVVEPKKFVSRLKKSNECFNSYEHQDAHEFLNYLLN 247
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 54/73 (73%)
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
TWVHE+FQG +ET+CL CE V+S+ E F ++ V++K N+SI QCL FS++E L ++
Sbjct: 366 TWVHEVFQGETVNETRCLWCENVTSRSESFLEISVEVKPNSSIQQCLSDFSASELLGGED 425
Query: 190 KFKCDNCASYQEA 202
KF+CD+C+ EA
Sbjct: 426 KFQCDSCSGLHEA 438
>gi|213402105|ref|XP_002171825.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|211999872|gb|EEB05532.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 583
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 26/144 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F QQDAHEFL FL+N I E+I +E +S++++ SG P W+H
Sbjct: 194 FRATQQQDAHEFLYFLLNAIEEII-NEYYRSHSET---------------SG---PNWIH 234
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F GILTSETKCL CE V+S++E F DL +DI+ +S++ CLR FSS E L S NKF C
Sbjct: 235 SLFGGILTSETKCLTCENVTSREESFLDLSIDIEDFSSVSSCLRTFSSAEMLSSKNKFHC 294
Query: 194 DNCASYQEA-------QGPNISAL 210
D C S QEA Q P I AL
Sbjct: 295 DACRSLQEAEKRIKLKQLPQILAL 318
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 93/152 (61%), Gaps = 16/152 (10%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK +K+K+LP ILALHLKRF Y ++ + H K+ H V +P ELRL + ++DA + DR+Y L
Sbjct: 304 EKRIKLKQLPQILALHLKRFNYSEQQSGHAKLFHTVAYPSELRLPNTTEDAEDADRLYEL 363
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
A+++H G GP+ GHY++IV++ W+LFDD+ V +D S I FFG Q T
Sbjct: 364 SAIIVHIGGGPHHGHYVAIVRTTSCGWVLFDDETVTPVDDSFIRKFFG----DQPGEATA 419
Query: 445 YILFYQSRD-----------STDARTMNSNDC 465
Y+LFY +++ S T NSND
Sbjct: 420 YVLFYTAKEEETPSSDDGSMSATPTTSNSNDA 451
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E + + L DL+ +IAT + + G +P +FI LR++ + F QQDAHEFL FL+N I
Sbjct: 155 ENIFTALKDLYESIATCECRYGVCSPTRFIQVLRRDNELFRATQQQDAHEFLYFLLNAIE 214
Query: 326 E 326
E
Sbjct: 215 E 215
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
P +R+FGL NFGNTCY +SVL +L+ K FR + E+ +K
Sbjct: 35 PSTDRFFGLTNFGNTCYVSSVLVSLFHLKQFRKTLSEFPSK 75
>gi|354546911|emb|CCE43643.1| hypothetical protein CPAR2_212870 [Candida parapsilosis]
Length = 745
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 84/125 (67%), Gaps = 6/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +KVKKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ ++DA N + +Y+L
Sbjct: 439 KTIKVKKLPQVLVINLKRFKYDEQMDKMVKLFDSISYPFKLRLFNTTEDA-NQNILYDLY 497
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+SI K WLLFDD+ V+ ++ + + FFG + + Y
Sbjct: 498 ALVIHIGGGPMHGHYVSICKIKAGLWLLFDDETVELVEDNYVMRFFG----NGPGLASAY 553
Query: 446 ILFYQ 450
ILFYQ
Sbjct: 554 ILFYQ 558
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 71/132 (53%), Gaps = 30/132 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--WVH 133
N M DAHEF N+LIN I E + E P +PT W +
Sbjct: 331 NNMHHDAHEFFNYLINEIIESLAKEIP-------------------------DPTKNWCN 365
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNK 190
+IFQGI+T+ETKCL+CETV+SK E F DL +DI S+ + FS ETL + NK
Sbjct: 366 DIFQGIITNETKCLSCETVTSKHEFFLDLSIDIPPGDSAYSLNFAINNFSKQETLTNQNK 425
Query: 191 FKCDNCASYQEA 202
F C+ C++ QEA
Sbjct: 426 FHCNTCSALQEA 437
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFL 320
++++ TLL L DLF ++ +K +G ++P FIT+L+ + F N M DAHEF N+L
Sbjct: 285 QRDETTLLYALKDLFESMVENKSPIGVVSPTYFITKLKDKNYLFRQNNMHHDAHEFFNYL 344
Query: 321 INHINEKCMK 330
IN I E K
Sbjct: 345 INEIIESLAK 354
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 27/34 (79%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG+ NFGNTCY NS+LQ LY+ + FR +++++
Sbjct: 16 KVFGMENFGNTCYCNSILQCLYYTESFRTKLIQH 49
>gi|255723858|ref|XP_002546858.1| hypothetical protein CTRG_01163 [Candida tropicalis MYA-3404]
gi|240134749|gb|EER34303.1| hypothetical protein CTRG_01163 [Candida tropicalis MYA-3404]
Length = 741
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ +DD D++Y L
Sbjct: 431 KTIKLKKLPKVLVINLKRFKYDEEMDKMVKLFDSISYPFKLRLFNTTDDESLQDQLYELY 490
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+SI K WLLFDD+ V+ ++ S + FFG + Y
Sbjct: 491 ALVIHIGGGPMHGHYVSICKIKAGLWLLFDDETVELVEDSYVMRFFG----DGPGLASAY 546
Query: 446 ILFYQ 450
ILFY+
Sbjct: 547 ILFYR 551
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 26/130 (20%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
N M DAHEF N+LIN I E + E D G G N W +I
Sbjct: 323 NNMHHDAHEFFNYLINEIIESVNKE-------------DKGDGIN----------WCSDI 359
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFK 192
F+G++T+ETKCL+CETV+SK E F DL VDI + + S+T L FS +ETL + NKF
Sbjct: 360 FRGLITNETKCLSCETVTSKQELFLDLSVDIPPGESSFSLTYALNNFSKSETLTNQNKFY 419
Query: 193 CDNCASYQEA 202
C+ C+S QEA
Sbjct: 420 CNTCSSLQEA 429
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 249 PFRDRVLEYKAKNKKNKET-LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-D 306
P + L + ++ N++T LL L DLF ++ +K +G ++P FI +L+++ F
Sbjct: 263 PIINLDLPLQTPSEINEDTALLYALRDLFESMVENKSTIGVVSPSYFIQKLKEKNFLFRQ 322
Query: 307 NYMQQDAHEFLNFLINHINEKCMKVKK 333
N M DAHEF N+LIN I E K K
Sbjct: 323 NNMHHDAHEFFNYLINEIIESVNKEDK 349
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA 259
+ FG+ NFGNTCY NS+LQ LY+ + FR +++++ +
Sbjct: 17 KIFGMENFGNTCYCNSILQCLYYTENFRTQLIQHNS 52
>gi|448514002|ref|XP_003867040.1| hypothetical protein CORT_0A12170 [Candida orthopsilosis Co 90-125]
gi|380351378|emb|CCG21602.1| hypothetical protein CORT_0A12170 [Candida orthopsilosis Co 90-125]
Length = 735
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 83/125 (66%), Gaps = 6/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +KVKKLP +L ++LKRFKY ++M++ VK+ + +P LRLF+ ++DA N + +Y+L
Sbjct: 439 KTIKVKKLPQVLVINLKRFKYDEQMDKMVKLFDSISYPFRLRLFNTTEDA-NQNILYDLY 497
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+SI K WLLFDD+ V+ ++ + + FFG + + Y
Sbjct: 498 ALVIHIGGGPMHGHYVSICKIKAGLWLLFDDETVELVEDNFVMRFFG----NGPGLASAY 553
Query: 446 ILFYQ 450
ILFYQ
Sbjct: 554 ILFYQ 558
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 30/132 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--WVH 133
N M DAHEF N+LIN I E + E P +PT W +
Sbjct: 331 NNMHHDAHEFFNYLINEIIESLTKELP-------------------------DPTRNWCN 365
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNK 190
+IFQGI+T+ETKCL+CETV+SK E F DL +DI + S+ + FS +ETL + NK
Sbjct: 366 DIFQGIITNETKCLSCETVTSKHEFFLDLSIDIPPGESAYSLNFAINNFSKSETLTNQNK 425
Query: 191 FKCDNCASYQEA 202
F C+ C+S QEA
Sbjct: 426 FHCNTCSSLQEA 437
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFL 320
++++ LL L DLF ++ +K +G ++P FIT+L+ + F N M DAHEF N+L
Sbjct: 285 QRDETALLYALKDLFESMVENKSPIGVVSPTYFITKLKDKNYLFRQNNMHHDAHEFFNYL 344
Query: 321 INHINEKCMKVKKLP 335
IN I E K+LP
Sbjct: 345 INEIIESL--TKELP 357
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIAT 281
+ FG+ NFGNTCY NS+LQ LY+ + FR ++++ N+ E L FH T
Sbjct: 16 KVFGMENFGNTCYCNSILQCLYYTESFRTNLIQH---NQTQHEPKLVVNGIKFHGFTT 70
>gi|58267246|ref|XP_570779.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227013|gb|AAW43472.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 728
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/155 (40%), Positives = 92/155 (59%), Gaps = 20/155 (12%)
Query: 56 LGW---ECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN----HINEVILSERPQSNAKS 108
LGW + + +++ S+ F+N Q DAHEF + ++N ++ V R Q +
Sbjct: 297 LGWGVVQPNDVMDAVKRSAPSFNNDDQHDAHEFFSVVVNTLAKEVDAVNEKLRAQGKEVA 356
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
K++AP T+V +FQGI TSETKCL+CET+SS+DE+F DL VDI+Q
Sbjct: 357 KMTAPWAK-------------TFVEALFQGITTSETKCLSCETISSRDEEFIDLSVDIEQ 403
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+ SIT CLR FSS E + KF C++C+ +QEA+
Sbjct: 404 HCSITSCLRQFSSDEMMSGREKFSCESCSGHQEAK 438
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ +++K+LP ILA+HLKRF + + R +K+ +RV P L + +D+ NPD++Y+L
Sbjct: 438 KRSIRIKRLPPILAVHLKRFAHNESY-RAIKLFYRVNHPTTLIPPNTTDNCENPDQIYDL 496
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA+++H G+GP +GHY+++ ++ W++ DDD ++ I+++ +E + G + Q G
Sbjct: 497 VAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGNRTQGQ-----G 551
Query: 445 YILFYQSRDST 455
Y+LFYQ+R T
Sbjct: 552 YVLFYQARGIT 562
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
ER +G+ NF N+C+ NSVLQALY C FRD V Y
Sbjct: 38 ERLWGIENFSNSCFCNSVLQALYACSTFRDFVEAY 72
>gi|134111809|ref|XP_775440.1| hypothetical protein CNBE1550 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258099|gb|EAL20793.1| hypothetical protein CNBE1550 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 802
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 97/173 (56%), Gaps = 28/173 (16%)
Query: 56 LGW---ECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN----HINEVILSERPQSNAKS 108
LGW + + +++ S+ F+N Q DAHEF + ++N ++ V R Q +
Sbjct: 297 LGWGVVQPNDVMDAVKRSAPSFNNDDQHDAHEFFSVVVNTLAKEVDAVNEKLRAQGKEVA 356
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
K++AP T+V +FQGI TSETKCL+CET+SS+DE+F DL VDI+Q
Sbjct: 357 KMTAPWAK-------------TFVEALFQGITTSETKCLSCETISSRDEEFIDLSVDIEQ 403
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
+ SIT CLR FSS E + KF C++C+ +QEA+ + I R PP
Sbjct: 404 HCSITSCLRQFSSDEMMSGREKFSCESCSGHQEAK--------RSIRIKRLPP 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ +++K+LP ILA+HLKRF + + R +K+ +RV P L + +D+ NPD++Y+L
Sbjct: 438 KRSIRIKRLPPILAVHLKRFAHNESY-RAIKLFYRVNHPTTLIPPNTTDNCENPDQIYDL 496
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA+++H G+GP +GHY+++ ++ W++ DDD ++ I+++ +E + G + Q G
Sbjct: 497 VAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGNRTQGQ-----G 551
Query: 445 YILFYQSRDST 455
Y+LFYQ+R T
Sbjct: 552 YVLFYQARGIT 562
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
ER +G+ NF N+C+ NSVLQALY C FRD V Y
Sbjct: 38 ERLWGIENFSNSCFCNSVLQALYACSTFRDFVEAY 72
>gi|448084409|ref|XP_004195596.1| Piso0_004997 [Millerozyma farinosa CBS 7064]
gi|359377018|emb|CCE85401.1| Piso0_004997 [Millerozyma farinosa CBS 7064]
Length = 761
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 87/140 (62%), Gaps = 13/140 (9%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHL---SDDAVNPDR-- 381
K +K+KKLP +L ++LKRFKY DKM+R VK+ + +P LRLF+ S DA N R
Sbjct: 438 KTIKMKKLPEVLVINLKRFKYDDKMDRMVKLFDSISYPFSLRLFNTATSSSDAGNDFRND 497
Query: 382 ---MYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDH 437
+Y L A+V+H G GP GHYIS+ K+ + WLLFDD+ V+ +D S + FFG +
Sbjct: 498 HFSLYELYALVVHIGGGPMHGHYISLCKTKANLWLLFDDETVELVDTSYVMRFFG----N 553
Query: 438 QKSSETGYILFYQSRDSTDA 457
+ YIL+YQ D++ +
Sbjct: 554 GPGLASAYILYYQKLDTSKS 573
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 75/131 (57%), Gaps = 29/131 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSE-RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHE 134
N M DAHEF N+LIN I E + E PQ+N W +
Sbjct: 331 NNMHHDAHEFCNYLINEIIECVDREVGPQNN-------------------------WCKK 365
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKF 191
+FQGI T+ETKCL+CET++SKDE F DL VD+ + +TS+T L FS +ETL NKF
Sbjct: 366 LFQGISTNETKCLSCETITSKDEAFLDLSVDVPHDRHSTSLTYSLNNFSKSETLTHQNKF 425
Query: 192 KCDNCASYQEA 202
C++C+S QEA
Sbjct: 426 YCNSCSSLQEA 436
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG+ NFGNTCY NS+LQ LY+ + FR+ +L + K
Sbjct: 20 KIFGMENFGNTCYCNSILQCLYYTEKFRNDLLAHNYK 56
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHIN 325
LL L D++ ++ ++ + G + P FI++L+++ F N M DAHEF N+LIN I
Sbjct: 290 ALLYALRDIYESMVENESQTGVVCPNYFISKLKEKNYLFRQNNMHHDAHEFCNYLINEII 349
Query: 326 E 326
E
Sbjct: 350 E 350
>gi|68472565|ref|XP_719601.1| hypothetical protein CaO19.9575 [Candida albicans SC5314]
gi|46441425|gb|EAL00722.1| hypothetical protein CaO19.9575 [Candida albicans SC5314]
Length = 700
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ +DD D +Y L
Sbjct: 424 KTIKLKKLPEVLVINLKRFKYDEQMDKMVKLFDSINYPFKLRLFNTTDDESLTDLLYELY 483
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+S+ K WLLFDD+ V+ ++ S + FFG + + Y
Sbjct: 484 ALVIHIGGGPMHGHYVSLCKIKAGLWLLFDDETVELVEDSYVMRFFG----NGPGLASAY 539
Query: 446 ILFYQ 450
ILFY+
Sbjct: 540 ILFYR 544
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 28/131 (21%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-EEPTWVHE 134
N M DAHEF N+L N I E + E GF + W +
Sbjct: 316 NNMHHDAHEFFNYLTNEIIESLNKE------------------------GFTNDKNWCSD 351
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKF 191
IF+G++T+ETKCL+CE ++SK E F DL +DI S++ L FS +ETL NKF
Sbjct: 352 IFRGLITNETKCLSCEKITSKQELFLDLSIDIPPGESAFSLSYALNNFSKSETLTHQNKF 411
Query: 192 KCDNCASYQEA 202
C+ C+S QEA
Sbjct: 412 YCNTCSSLQEA 422
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF--DNYMQQDAHEFLNFLINHIN 325
LL L DLF ++ +K +G ++P FI +L KEK+ F N M DAHEF N+L N I
Sbjct: 276 LLYALKDLFESMVENKSTIGVVSPTYFIQKL-KEKNFFVRQNNMHHDAHEFFNYLTNEII 334
Query: 326 EKCMK 330
E K
Sbjct: 335 ESLNK 339
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++ FG+ NFGNTCY NS+LQ LY+ + FR +++++
Sbjct: 16 DKIFGMENFGNTCYCNSILQCLYYTESFRLKLIQH 50
>gi|238881910|gb|EEQ45548.1| hypothetical protein CAWG_03876 [Candida albicans WO-1]
Length = 700
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ +DD D +Y L
Sbjct: 424 KTIKLKKLPEVLVINLKRFKYDEQMDKMVKLFDSINYPFKLRLFNTTDDESLTDLLYELY 483
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+S+ K WLLFDD+ V+ ++ S + FFG + + Y
Sbjct: 484 ALVIHIGGGPMHGHYVSLCKIKAGLWLLFDDETVELVEDSYVMRFFG----NGPGLASAY 539
Query: 446 ILFYQ 450
ILFY+
Sbjct: 540 ILFYR 544
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 28/131 (21%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-EEPTWVHE 134
N M DAHEF N+L N I E + E GF + W +
Sbjct: 316 NNMHHDAHEFFNYLTNEIIESLNKE------------------------GFTNDKNWCSD 351
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKF 191
IF+G++T+ETKCL+CE ++SK E F DL +DI S++ L FS +ETL NKF
Sbjct: 352 IFRGLITNETKCLSCEKITSKQELFLDLSIDIPPGESAFSLSYALNNFSKSETLTHQNKF 411
Query: 192 KCDNCASYQEA 202
C+ C+S QEA
Sbjct: 412 YCNTCSSLQEA 422
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHINE 326
LL L DLF ++ +K +G ++P FI +L+++ F N M DAHEF N+L N I E
Sbjct: 276 LLYALKDLFESMVENKSTIGVVSPTYFIQKLKEKNFLFRQNNMHHDAHEFFNYLTNEIIE 335
Query: 327 KCMK 330
K
Sbjct: 336 SLNK 339
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++ FG+ NFGNTCY NS+LQ LY+ + FR +++++
Sbjct: 16 DKIFGMENFGNTCYCNSILQCLYYTESFRLKLIQH 50
>gi|448079917|ref|XP_004194498.1| Piso0_004997 [Millerozyma farinosa CBS 7064]
gi|359375920|emb|CCE86502.1| Piso0_004997 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 88/140 (62%), Gaps = 13/140 (9%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHL---SDDAVNPDR-- 381
K +K+KKLP +L ++LKRFKY DKM+R VK+ + +P LRLF+ S+DA + R
Sbjct: 437 KTIKMKKLPEVLVINLKRFKYDDKMDRMVKLFDSISYPFSLRLFNTATSSNDAGDSFRND 496
Query: 382 ---MYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDH 437
+Y L A+V+H G GP GHYIS+ K+ + WLLFDD+ V+ +D S + FFG +
Sbjct: 497 HFSLYELYALVVHIGGGPMHGHYISLCKTKANLWLLFDDETVELVDASYVMRFFG----N 552
Query: 438 QKSSETGYILFYQSRDSTDA 457
+ YIL+YQ D++ +
Sbjct: 553 GPGLASAYILYYQKLDTSKS 572
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 74/131 (56%), Gaps = 29/131 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSE-RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHE 134
N M DAHEF N+LIN I E + E PQ+N W +
Sbjct: 330 NNMHHDAHEFCNYLINEIIECVDREVGPQNN-------------------------WCKK 364
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKF 191
+FQGI T+ETKCL+CET++SKDE F DL VD+ + TS+T L FS +ETL NKF
Sbjct: 365 LFQGISTNETKCLSCETITSKDEAFLDLSVDVPHDRHATSLTYSLNNFSKSETLTHQNKF 424
Query: 192 KCDNCASYQEA 202
C++C+S QEA
Sbjct: 425 YCNSCSSLQEA 435
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHIN 325
LL L D++ ++ ++ + G + P FIT+L+++ F N M DAHEF N+LIN I
Sbjct: 289 ALLYALRDIYESMVENESQTGVVCPNYFITKLKEKNYLFRQNNMHHDAHEFCNYLINEII 348
Query: 326 E 326
E
Sbjct: 349 E 349
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
+ FG+ NFGNTCY NS+LQ LY+ + FR+ +L + K + + ++
Sbjct: 20 KIFGMENFGNTCYCNSILQCLYYTEKFRNDLLAHNYKPHRRRTSV 64
>gi|68472820|ref|XP_719475.1| hypothetical protein CaO19.2026 [Candida albicans SC5314]
gi|46441294|gb|EAL00592.1| hypothetical protein CaO19.2026 [Candida albicans SC5314]
Length = 700
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ +DD D +Y L
Sbjct: 424 KTIKLKKLPEVLVINLKRFKYDEQMDKMVKLFDSINYPFKLRLFNTTDDESLTDLLYELY 483
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+S+ K WLLFDD+ V+ ++ S + FFG + + Y
Sbjct: 484 ALVIHIGGGPMHGHYVSLCKIKAGLWLLFDDETVELVEDSYVMRFFG----NGPGLASAY 539
Query: 446 ILFYQ 450
ILFY+
Sbjct: 540 ILFYR 544
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 28/131 (21%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-EEPTWVHE 134
N M DAHEF N+L N I E + E GF + W +
Sbjct: 316 NNMHHDAHEFFNYLTNEIIESLNKE------------------------GFTNDKNWCSD 351
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKF 191
IF+G++T+ETKCL+CE ++SK E F DL +DI S++ L FS +ETL NKF
Sbjct: 352 IFRGLITNETKCLSCEKITSKQELFLDLSIDIPPGESAFSLSYALNNFSKSETLTHQNKF 411
Query: 192 KCDNCASYQEA 202
C+ C+S QEA
Sbjct: 412 YCNTCSSLQEA 422
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHINE 326
LL L DLF ++ +K +G ++P FI +L+++ F N M DAHEF N+L N I E
Sbjct: 276 LLYALKDLFESMVENKSTIGVVSPTYFIQKLKEKNFLFRQNNMHHDAHEFFNYLTNEIIE 335
Query: 327 KCMK 330
K
Sbjct: 336 SLNK 339
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 28/35 (80%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
++ FG+ NFGNTCY NS+LQ LY+ + FR +++++
Sbjct: 16 DKIFGMENFGNTCYCNSILQCLYYTESFRLKLIQH 50
>gi|401881256|gb|EJT45558.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
2479]
Length = 850
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F QQDAHEFL F++N ++E E Q +AK K D H T++
Sbjct: 281 FAGQGQQDAHEFLGFILNQLSE----EVEQMDAKLKREGKDVVDIKEHGR------TFIQ 330
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F G+L +ET+CLNCET SS++E F DL +DI+Q++S+T CLR FS +E LCS NKF C
Sbjct: 331 NLFHGVLVNETRCLNCETTSSREESFLDLSIDIEQHSSLTSCLRQFSDSEMLCSTNKFYC 390
Query: 194 DNCASYQEAQ 203
+ C EA+
Sbjct: 391 ETCCGLVEAE 400
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ M++K+LP IL LHLKRF+ D M R K+ +RV FPL+LR+ +++ + +R+Y L
Sbjct: 400 ERRMRIKELPNILGLHLKRFR-QDDMGRLHKLFYRVTFPLQLRVPCTTEETEDAERLYEL 458
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G+ P GHY++IV+S W++ DD+ ++ I++S + ++FG + G
Sbjct: 459 FAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESDLANYFG-----DNITGAG 513
Query: 445 YILFYQS 451
Y+LFYQ+
Sbjct: 514 YVLFYQA 520
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+E +GL NFGNTCY NSVLQALY PFR + Y
Sbjct: 47 DEALWGLENFGNTCYCNSVLQALYASDPFRSFIEAY 82
>gi|241950697|ref|XP_002418071.1| deubiquitinating enzyme; ubiquitin carboxyl-terminal hydrolase,
putative; ubiquitin thioesterase, putative;
ubiquitin-specific-processing protease, putative
[Candida dubliniensis CD36]
gi|223641410|emb|CAX43370.1| deubiquitinating enzyme [Candida dubliniensis CD36]
Length = 700
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 81/125 (64%), Gaps = 5/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++LKRFKY ++M++ VK+ + +P +LRLF+ +DD D +Y L
Sbjct: 424 KTIKLKKLPEVLVINLKRFKYDEQMDKMVKLFDSINYPFKLRLFNTTDDESLTDLLYELY 483
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+S+ K WLLFDD+ V+ ++ S + FFG + + Y
Sbjct: 484 ALVIHIGGGPMHGHYVSLCKIKAGLWLLFDDETVELVEDSYVMRFFG----NGPGLASAY 539
Query: 446 ILFYQ 450
ILFY+
Sbjct: 540 ILFYR 544
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 28/131 (21%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-EEPTWVHE 134
N M DAHEF N+L N I E + E GF ++ W +
Sbjct: 316 NNMHHDAHEFFNYLTNEIIESLNKE------------------------GFTDDKNWCSD 351
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKF 191
IF+G++T+ETKCL+CE ++SK E F DL +DI S++ L FS +ETL NKF
Sbjct: 352 IFRGLITNETKCLSCEKITSKQELFLDLSIDIPPGESAFSLSYALNNFSKSETLTHQNKF 411
Query: 192 KCDNCASYQEA 202
C+ C+S QEA
Sbjct: 412 YCNTCSSLQEA 422
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHIN 325
LL L DLF ++ +K +G ++P FI +L+ + F N M DAHEF N+L N I
Sbjct: 275 ALLYALKDLFESMVENKSTIGVVSPTYFIQKLKDKNFLFRQNNMHHDAHEFFNYLTNEII 334
Query: 326 EKCMK 330
E K
Sbjct: 335 ESLNK 339
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 29/36 (80%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+++ FG+ NFGNTCY NS+LQ LY+ + FR +++++
Sbjct: 15 SDKIFGMENFGNTCYCNSILQCLYYTESFRLKLIQH 50
>gi|406696946|gb|EKD00217.1| ubiquitin thiolesterase 9 [Trichosporon asahii var. asahii CBS
8904]
Length = 1145
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 10/130 (7%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F QQDAHEFL F++N ++E E Q +AK K + H T++
Sbjct: 281 FAGQGQQDAHEFLGFILNQLSE----EVEQMDAKLKREGKEVVDIKEHGR------TFIQ 330
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+F G+L +ET+CLNCET SS++E F DL +DI+Q++S+T CLR FS +E LCS NKF C
Sbjct: 331 NLFHGVLVNETRCLNCETTSSREESFLDLSIDIEQHSSLTSCLRQFSDSEMLCSTNKFYC 390
Query: 194 DNCASYQEAQ 203
+ C EA+
Sbjct: 391 ETCCGLVEAE 400
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 85/127 (66%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ M++K+LP IL LHLKRF+ D M R K+ +RV FPL+LR+ +++ + +R+Y L
Sbjct: 400 ERRMRIKELPNILGLHLKRFR-QDDMGRLHKLFYRVTFPLQLRVPCTTEETEDAERLYEL 458
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G+ P GHY++IV+S W++ DD+ ++ I++S + ++FG + G
Sbjct: 459 FAVVVHIGNTPTHGHYVTIVRSQPGQWVMCDDENIEPIEESDLANYFG-----DNITGAG 513
Query: 445 YILFYQS 451
Y+LFYQ+
Sbjct: 514 YVLFYQA 520
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 25/36 (69%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+E +GL NFGNTCY NSVLQALY PFR + Y
Sbjct: 47 DEALWGLENFGNTCYCNSVLQALYASDPFRSFIEAY 82
>gi|149248686|ref|XP_001528730.1| hypothetical protein LELG_01250 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448684|gb|EDK43072.1| hypothetical protein LELG_01250 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 841
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +KVKKLP +L ++LKRFKY +K+++ VK+ + +P +LRLF+ +DD + +Y L
Sbjct: 456 KTIKVKKLPNVLVINLKRFKYDEKIDKLVKLFDSISYPFKLRLFNTTDDCFE-NILYELY 514
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY+SI K WLLFDD+ V+ ++ + + FFG + + Y
Sbjct: 515 ALVIHIGGGPMHGHYVSICKIKAGLWLLFDDETVELVEDNYVMRFFG----NGPGLASAY 570
Query: 446 ILFYQ 450
ILFYQ
Sbjct: 571 ILFYQ 575
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 29/130 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
N M DAHEF N+LIN I E + N +SK P W ++
Sbjct: 351 NNMHHDAHEFFNYLINEIIESL-------NKESK-------------------PNWCTDL 384
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFK 192
FQG++T+ETKCL+CETV+S+ E F DL +DI + S+ + FS +ETL + NKF
Sbjct: 385 FQGLITNETKCLSCETVTSRHEHFLDLSIDIPPGENAYSLNYAINNFSKSETLTNQNKFH 444
Query: 193 CDNCASYQEA 202
C+ C+S QEA
Sbjct: 445 CNTCSSLQEA 454
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHINE 326
LL L DLF ++ +K +G ++P FI++L+++ F N M DAHEF N+LIN I E
Sbjct: 311 LLYALKDLFESMVENKSTIGVVSPSFFISKLKEKNYLFRQNNMHHDAHEFFNYLINEIIE 370
Query: 327 KCMKVKK 333
K K
Sbjct: 371 SLNKESK 377
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
N + FG+ NFGNTCY NS+LQ LY+ + FR ++L++
Sbjct: 14 NTKIFGMENFGNTCYCNSILQCLYYTEAFRKQLLQH 49
>gi|190348619|gb|EDK41104.2| hypothetical protein PGUG_05202 [Meyerozyma guilliermondii ATCC
6260]
Length = 687
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 102/207 (49%), Gaps = 43/207 (20%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
M QDAHEF N+LIN I EV+ D G N++ W +EIFQ
Sbjct: 313 MHQDAHEFYNYLINEIIEVV----------------DKECGPNNN--------WCNEIFQ 348
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKFKCD 194
G++T+ETKC++CET++SK+E+F DL +DI S+T CL FS +ETL NKF C+
Sbjct: 349 GMITNETKCISCETITSKEEEFLDLSIDIPPGDAAYSLTHCLNNFSRSETLTHQNKFYCN 408
Query: 195 NCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYF----CKPF 250
NC S QEA K I + P ++NF Y SV + + PF
Sbjct: 409 NCCSLQEAT--------KTIKLKKLPE----VLVINFKRFKYDESVDKMVKLFDSISYPF 456
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFH 277
+ R+ AK + TL A + H
Sbjct: 457 KLRLFNTSAKGQTEDFTLYELYALVIH 483
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD-RMYNL 385
K +K+KKLP +L ++ KRFKY + +++ VK+ + +P +LRLF+ S D +Y L
Sbjct: 418 KTIKLKKLPEVLVINFKRFKYDESVDKMVKLFDSISYPFKLRLFNTSAKGQTEDFTLYEL 477
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
A+VIH G GP GHY+++ K WLLFDD+ V+ +D S + FFG + +
Sbjct: 478 YALVIHIGGGPMHGHYVALCKVKAQLWLLFDDETVEVVDDSFVLKFFG----NGPGLASA 533
Query: 445 YILFYQ 450
YILFYQ
Sbjct: 534 YILFYQ 539
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNY-MQQDAHEFLNFLINHINE 326
LL L D+F + +K ++G ++P FIT+L+++ F M QDAHEF N+LIN I E
Sbjct: 271 LLYALKDMFECMIENKSQIGVVSPSHFITKLKEKNYLFRQVNMHQDAHEFYNYLINEIIE 330
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
+ +G+ NFGNTCY NS+LQ LY+ FR ++ + KE +
Sbjct: 20 KVYGMENFGNTCYCNSILQCLYYSDKFRTKLALHNITQHNRKEVM 64
>gi|146412422|ref|XP_001482182.1| hypothetical protein PGUG_05202 [Meyerozyma guilliermondii ATCC
6260]
Length = 687
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 101/207 (48%), Gaps = 43/207 (20%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
M QDAHEF N+LIN I EV+ D G N++ W +EIFQ
Sbjct: 313 MHQDAHEFYNYLINEIIEVV----------------DKECGPNNN--------WCNEIFQ 348
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---SITQCLRGFSSTETLCSDNKFKCD 194
G++T+ETKC++CET++SK+E+F DL +DI S+T CL FS ETL NKF C+
Sbjct: 349 GMITNETKCISCETITSKEEEFLDLSIDIPPGDAAYSLTHCLNNFSRLETLTHQNKFYCN 408
Query: 195 NCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYF----CKPF 250
NC S QEA K I + P ++NF Y SV + + PF
Sbjct: 409 NCCSLQEAT--------KTIKLKKLPE----VLVINFKRFKYDESVDKMVKLFDSISYPF 456
Query: 251 RDRVLEYKAKNKKNKETLLSCLADLFH 277
+ R+ AK + TL A + H
Sbjct: 457 KLRLFNTSAKGQTEDFTLYELYALVIH 483
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD-RMYNL 385
K +K+KKLP +L ++ KRFKY + +++ VK+ + +P +LRLF+ S D +Y L
Sbjct: 418 KTIKLKKLPEVLVINFKRFKYDESVDKMVKLFDSISYPFKLRLFNTSAKGQTEDFTLYEL 477
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
A+VIH G GP GHY+++ K WLLFDD+ V+ +D S + FFG + +
Sbjct: 478 YALVIHIGGGPMHGHYVALCKVKAQLWLLFDDETVEVVDDSFVLKFFG----NGPGLASA 533
Query: 445 YILFYQ 450
YILFYQ
Sbjct: 534 YILFYQ 539
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNY-MQQDAHEFLNFLINHINE 326
LL L D+F + +K ++G ++P FIT+L+++ F M QDAHEF N+LIN I E
Sbjct: 271 LLYALKDMFECMIENKSQIGVVSPSHFITKLKEKNYLFRQVNMHQDAHEFYNYLINEIIE 330
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
+ +G+ NFGNTCY NS+LQ LY+ FR ++ + KE +
Sbjct: 20 KVYGMENFGNTCYCNSILQCLYYSDKFRTKLALHNITQHNRKEVM 64
>gi|366989213|ref|XP_003674374.1| hypothetical protein NCAS_0A14370 [Naumovozyma castellii CBS 4309]
gi|342300237|emb|CCC67995.1| hypothetical protein NCAS_0A14370 [Naumovozyma castellii CBS 4309]
Length = 729
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 86/137 (62%), Gaps = 7/137 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALHLKRFKY ++ N ++K+ ++V +PL+L + D ++ + Y L
Sbjct: 533 ERIVGLKQLPHTLALHLKRFKYSEEQNTNIKLFNKVQYPLKLDVASTFDSSI--AKKYEL 590
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH G P GHY+S+ K+ F WLLFDD+ V+ + + T+ +F G +S+ T
Sbjct: 591 TGVVIHMGGSPQHGHYVSLCKNDKFGWLLFDDETVESVTEKTVLEFTGDSSNQA----TA 646
Query: 445 YILFYQSRDSTDARTMN 461
Y+LFY+ D D + ++
Sbjct: 647 YVLFYKELDEKDTKPVD 663
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 29/138 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F++ MQQDAHEFLNFL+N ++E + NH S +PT
Sbjct: 417 FNSMMQQDAHEFLNFLLNELSEYL---------------------QNHISHPSNKPTDIP 455
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETL 185
+V ++FQG+LT+ KCL C+ ++S+DE F D + +K +N I LR + + E L
Sbjct: 456 FKNYVIDLFQGVLTNRIKCLTCDNITSRDEPFLDFPIGVKGDENIDIQDVLRCYHTREML 515
Query: 186 CSDNKFKCDNCASYQEAQ 203
NKF C C QEA+
Sbjct: 516 NGSNKFYCSQCCGLQEAE 533
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N K +L L +LF I +K G ++P +F+ L+KE F++ MQQDAHEFLNFL
Sbjct: 373 NPSEKVSLYETLRELFECITENKSLTGVVSPVEFVKVLKKENILFNSMMQQDAHEFLNFL 432
Query: 321 INHINE 326
+N ++E
Sbjct: 433 LNELSE 438
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 27/42 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
+ FG NFGNTCY NSVLQ LY R +LEY A++ K +
Sbjct: 135 KVFGYENFGNTCYCNSVLQCLYNLTELRLNLLEYPARDPKTR 176
>gi|150864073|ref|XP_001382766.2| hypothetical protein PICST_87051 [Scheffersomyces stipitis CBS
6054]
gi|149385329|gb|ABN64737.2| ubiquitin carboxyl-terminal hydrolase [Scheffersomyces stipitis CBS
6054]
Length = 714
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 7/133 (5%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKLP +L ++ KRFKY +K+++ VK+ + +P +LR+F+ +DD + +Y L
Sbjct: 435 KTIKLKKLPEVLVINFKRFKYDEKVDKMVKLFDSISYPFKLRIFNTTDDERD-FSLYGLY 493
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+VIH G GP GHY++I K WLLFDD+ V+ ++ S + FFG + + Y
Sbjct: 494 ALVIHIGGGPMHGHYVAICKIKAGLWLLFDDETVELVEDSFVMRFFG----NGPGLASAY 549
Query: 446 ILFYQS-RDSTDA 457
ILFYQ D TDA
Sbjct: 550 ILFYQKCEDGTDA 562
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 27/130 (20%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
N M DAHEF N+LIN I E + E G DN+ W ++I
Sbjct: 328 NNMHHDAHEFFNYLINEIIECLNKEI---------------GVDNN---------WCNKI 363
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFK 192
FQG++T+ET+CL+CE ++SK E F DL VDI + S+T L FS +E L + NKF
Sbjct: 364 FQGLITNETRCLSCEAITSKHEFFLDLSVDIPPGESAYSLTYSLNNFSKSEILTNQNKFY 423
Query: 193 CDNCASYQEA 202
C+ C+S QEA
Sbjct: 424 CNTCSSLQEA 433
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHIN 325
LL L D+F ++ +K G ++P FIT+L+++ F N M DAHEF N+LIN I
Sbjct: 287 ALLYALKDMFESMIENKSIFGVVSPVHFITKLKEKNFLFRQNNMHHDAHEFFNYLINEII 346
Query: 326 E 326
E
Sbjct: 347 E 347
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
+ FG+ NFGNTCY NS+LQ L++ + FR ++++ N + K
Sbjct: 24 KIFGMENFGNTCYCNSILQCLFYTEKFRTNLVKHHMTNHEPK 65
>gi|405120668|gb|AFR95438.1| ubiquitin carboxyl-terminal hydrolase 12 [Cryptococcus neoformans
var. grubii H99]
Length = 786
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 102/173 (58%), Gaps = 28/173 (16%)
Query: 56 LGW---ECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAK--S 108
LGW + + +++ S+ F+N Q DAHEF + ++N + + + ++E+ ++ K +
Sbjct: 298 LGWGVVQPNDVMDAVKRSAPSFNNDDQHDAHEFFSVVVNTLAKEVDAVNEKLRAEGKEVA 357
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
+++AP T++ +FQGI TSETKCL+CET+SS++E+F DL VDI+Q
Sbjct: 358 QMTAPWAK-------------TFIEALFQGITTSETKCLSCETISSREEEFIDLSVDIEQ 404
Query: 169 NTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
+ SIT CLR FSS E + KF C++C+ +Q+A+ + I R PP
Sbjct: 405 HCSITSCLRQFSSDEMMSGREKFSCESCSGHQQAK--------RSIRIKRLPP 449
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 89/131 (67%), Gaps = 7/131 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ +++K+LP ILA+HLKRF + + R +K+ +RV P+ L + +D+ NPD++Y+L
Sbjct: 439 KRSIRIKRLPPILAVHLKRFAHNESY-RAIKLFYRVNHPITLIPPNTTDNCENPDQIYDL 497
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA+++H G+GP +GHY+++ ++ W++ DDD ++ I+++ +E + G + Q G
Sbjct: 498 VAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGNRTQGQ-----G 552
Query: 445 YILFYQSRDST 455
Y+LFYQ+R T
Sbjct: 553 YVLFYQARGIT 563
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
ER +G+ NF N+C+ NSVLQALY C FRD V Y
Sbjct: 38 ERLWGIENFSNSCFCNSVLQALYACSTFRDFVEAY 72
>gi|156846049|ref|XP_001645913.1| hypothetical protein Kpol_1045p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116583|gb|EDO18055.1| hypothetical protein Kpol_1045p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 712
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 85/131 (64%), Gaps = 7/131 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LA+HLKRFKY D+ +VK+ +++ +P+ L++ D++V+ D Y L
Sbjct: 519 ERLLGLKELPKTLAIHLKRFKYSDEHGTNVKLFNKIKYPITLKVSSTFDESVSKD--YEL 576
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHYIS+ K+ D+ WLLFDD+ V+ I + T+ F G S+ T
Sbjct: 577 GGLVVHIGIGPQHGHYISVCKTSDYGWLLFDDETVECISEDTVLSFVG----DSNSAGTA 632
Query: 445 YILFYQSRDST 455
Y+LFY+ +S+
Sbjct: 633 YVLFYKEINSS 643
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F M QDAHEFLNFL+N +++ + + N PD N E +V+
Sbjct: 402 FATDMHQDAHEFLNFLLNDVSDYLDKANTEKN-------PDNTRSGN-------ETNFVN 447
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDI--KQNTSITQCLRGFSSTETLCSDNKF 191
+IF+G +T++ +CL C+TV+S+ E F D +++ + I + + + E L NKF
Sbjct: 448 DIFKGTITNQIRCLTCDTVTSRYESFLDFPIEVIGDETIDIQKMMISYHQKEMLQGSNKF 507
Query: 192 KCDNCASYQEAQ 203
C C QEA+
Sbjct: 508 YCGTCFELQEAE 519
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%)
Query: 254 VLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDA 313
V+ K K + L L D+F IA + G I+P F+ ++KE F M QDA
Sbjct: 351 VVRLKYPIKMPEHNLFKGLEDIFRAIAESRTLTGVISPGGFMEIVKKENILFATDMHQDA 410
Query: 314 HEFLNFLINHINE 326
HEFLNFL+N +++
Sbjct: 411 HEFLNFLLNDVSD 423
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 196 CASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
+ Y + P S +E D + +GL NFGNTCY NS+LQ LY FR+ +L
Sbjct: 101 ASEYTHVEKPVFSPTNEENNLDIDIDIHKVYGLENFGNTCYCNSILQCLYNMNEFRENIL 160
>gi|365981469|ref|XP_003667568.1| hypothetical protein NDAI_0A01670 [Naumovozyma dairenensis CBS 421]
gi|343766334|emb|CCD22325.1| hypothetical protein NDAI_0A01670 [Naumovozyma dairenensis CBS 421]
Length = 846
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP ILALHLKRFKY + N ++K+ ++V +PL L + D ++ ++ Y L
Sbjct: 637 ERIVGLKQLPHILALHLKRFKYSEVKNTNIKLFNKVYYPLTLNVASTFDSSI--EKAYEL 694
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GS P GHY+S+ K+ F WLLFDD+ V+ + +ST+ +F G ++ T
Sbjct: 695 TGVVIHMGSSPQHGHYVSLCKNDKFGWLLFDDETVESVSESTVLEFTGDPNNQA----TA 750
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 751 YVLFYK 756
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 36/146 (24%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F++ MQQD+HEFLNFL+N + + + S +++ F +
Sbjct: 533 FNSMMQQDSHEFLNFLLNELRDYLPS----------------------TTNNF-----IT 565
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
+FQGILT++ KCL C+ ++S+DE F D + +K + T+I LR + + E L NKF
Sbjct: 566 NLFQGILTNQIKCLTCDNITSRDEPFLDFPIGVKDDEETNIETLLRNYHTREMLNGSNKF 625
Query: 192 KCDNCASYQEA-------QGPNISAL 210
C+ C QEA Q P+I AL
Sbjct: 626 YCNQCCGLQEAERIVGLKQLPHILAL 651
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N+ K L + L D+F +I ++ G +AP +F+ L+KE F++ MQQD+HEFLNFL
Sbjct: 489 NQYEKANLYNSLKDIFESITENRYLTGIVAPTEFVKILKKENVLFNSMMQQDSHEFLNFL 548
Query: 321 INHI 324
+N +
Sbjct: 549 LNEL 552
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 23/34 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR +LEY
Sbjct: 170 KVFGYENFGNTCYCNSVLQCLYNLYEFRLNMLEY 203
>gi|260942387|ref|XP_002615492.1| hypothetical protein CLUG_04374 [Clavispora lusitaniae ATCC 42720]
gi|238850782|gb|EEQ40246.1| hypothetical protein CLUG_04374 [Clavispora lusitaniae ATCC 42720]
Length = 728
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 12/137 (8%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD-----DAVNPD- 380
K +K+KK P IL ++ KRFKY DK++R VK+ + +PL+LRLF+ + D P+
Sbjct: 415 KTIKLKKTPEILVINFKRFKYDDKLDRMVKLFDSISYPLKLRLFNTTSAGKQTDNAKPED 474
Query: 381 -RMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQ 438
+Y L A+V+H G GP GHY+++ K W LFDD+ V+ +D+S + FFG +
Sbjct: 475 FSLYGLYALVVHIGGGPMHGHYVALCKCKAGLWFLFDDETVELVDESYVLRFFG----NG 530
Query: 439 KSSETGYILFYQSRDST 455
+ YILFY+ D++
Sbjct: 531 PGLASAYILFYEKLDTS 547
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 72/128 (56%), Gaps = 27/128 (21%)
Query: 78 MQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
M QDAHEF N+LIN E ++ E+ ++N W IFQ
Sbjct: 310 MHQDAHEFCNYLINETIESVVHEKGEAN------------------------NWCTNIFQ 345
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFKCD 194
GI+T+ETKCL+CE+++SKDE F DL +DI + S+T L FS +ETL NKF C+
Sbjct: 346 GIITNETKCLSCESITSKDETFLDLSIDIPPGESAYSLTYSLNNFSKSETLNHQNKFYCN 405
Query: 195 NCASYQEA 202
C+S QEA
Sbjct: 406 TCSSLQEA 413
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 260 KNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNY-MQQDAHEFLN 318
+ KKN+ LL L DLF + ++ ++G ++P F+ +L+ + F M QDAHEF N
Sbjct: 260 EGKKNETCLLYALKDLFEAMVENESQIGVVSPAYFVRKLKDKNYLFRQVNMHQDAHEFCN 319
Query: 319 FLINHINEKCMKVK 332
+LIN E + K
Sbjct: 320 YLINETIESVVHEK 333
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
+ FG+ N+GNTCY NS+LQ L++ FR +L+Y + + T+
Sbjct: 17 KIFGMENYGNTCYCNSILQCLFYTSKFRTELLKYNYTPHERRRTI 61
>gi|281343678|gb|EFB19262.1| hypothetical protein PANDA_013427 [Ailuropoda melanoleuca]
Length = 190
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+V KLP+ILALHL +F+YM +++ V +S V L S DA+N D +Y+L
Sbjct: 71 QKRMRVTKLPVILALHLTQFEYM--VHQAVSLSGLAVVTLA---HSTSSDAMNLDCIYDL 125
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGL 433
VA V HCGSGPN Y++IVKSH F L FDD +V+K+D IE+F+GL
Sbjct: 126 VAEVAHCGSGPNGERYLTIVKSHGFGLWFDDAIVEKMDDRAIEEFYGL 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
K EDF DL +++ QNTSIT LR S+TETLCS+ + CD S ++AQ
Sbjct: 23 KGEDFLDLSINVAQNTSITHRLRDVSNTETLCSEQTYYCDTGCSTEKAQ 71
>gi|344228883|gb|EGV60769.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 784
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 85/131 (64%), Gaps = 8/131 (6%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS---DDAVNPDRMY 383
K +K+K LP +L ++LKRFKY DK+++ +K+ + +PL+LRLF+ + D+A N ++Y
Sbjct: 431 KTIKIKYLPEVLVINLKRFKYDDKVDKLIKLFDMISYPLKLRLFNTTSNPDNAQNNFQLY 490
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L ++V+H G GP GHYIS+ K WLLFDD+ V+ +D+ + FFG + +
Sbjct: 491 ELSSLVVHIGGGPMHGHYISLCKIKPKIWLLFDDETVEIVDEFFVMKFFG----NGPALA 546
Query: 443 TGYILFYQSRD 453
+ YILFYQ D
Sbjct: 547 SAYILFYQKCD 557
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 27/130 (20%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
N M DAHEF N+LIN I E + E G DN W +++
Sbjct: 324 NNMHHDAHEFCNYLINEIIECLNKEN--------------GPEDN----------WCNDL 359
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFK 192
FQG +T+ETKCL+CETV+SK+E F DL +DI + S+T L FS +E L NKF
Sbjct: 360 FQGRITNETKCLSCETVTSKEETFLDLSIDIPPHSHSNSLTNLLNNFSRSEILTHQNKFY 419
Query: 193 CDNCASYQEA 202
C++C+S QEA
Sbjct: 420 CNSCSSLQEA 429
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHIN 325
LL L D+F + +K G ++P F+ +L+++ F N M DAHEF N+LIN I
Sbjct: 283 ALLYALKDMFECMVENKSNTGVVSPNYFMQKLKEKNYLFRQNNMHHDAHEFCNYLINEII 342
Query: 326 EKCMKVKKLP 335
E C+ + P
Sbjct: 343 E-CLNKENGP 351
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
++ FG+ N+GNTCY NS+LQ LY FR +L + + K L F N
Sbjct: 20 DKVFGMENYGNTCYCNSILQCLYHTHNFRVHLLSHHKTHHDRKLNLYGIKTHNFTN 75
>gi|403214962|emb|CCK69462.1| hypothetical protein KNAG_0C03580 [Kazachstania naganishii CBS
8797]
Length = 776
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K LP L+LHLKRFKY ++ N +VK+ +++ +PL L D +V+ + Y L
Sbjct: 556 ERLVGLKSLPKTLSLHLKRFKYSEEKNANVKLFNKIHYPLILNASSTFDSSVS--KSYRL 613
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VV+H G+GP+ GHY+S+ + F WLLFDD+ V+ +D+S + DF G +S T
Sbjct: 614 QGVVVHMGNGPHHGHYVSLCHTELFGWLLFDDETVESVDESYVLDFVG----SHESPTTA 669
Query: 445 YILFYQSRDSTD 456
Y+LFY D ++
Sbjct: 670 YVLFYSEIDGSE 681
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 29/132 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +N+ + S R Q T++
Sbjct: 452 FNTQMQQDAHEFLNFLLNDLNDYLQS-RGQ--------------------------TYIL 484
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS--ITQCLRGFSSTETLCSDNKF 191
FQG +T++ KCL C+T++S E F D ++++ + I + + E L NKF
Sbjct: 485 NQFQGTVTNQIKCLTCDTITSSSEPFLDFPIEVEADEEKYIQNVMEHYQQRELLRGSNKF 544
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 545 YCNECCGLQEAE 556
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K L + L ++F I ++ G ++P F+ L+KE F+ MQQDAHEFLNFL+N +
Sbjct: 412 KPNLYNTLKEIFECITENENYTGVVSPTLFVKTLKKENVLFNTQMQQDAHEFLNFLLNDL 471
Query: 325 NE 326
N+
Sbjct: 472 ND 473
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/37 (64%), Positives = 25/37 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG NFGNTCY NSVLQ LY FR RVLEY K
Sbjct: 159 KVFGYENFGNTCYCNSVLQCLYHLPEFRLRVLEYPEK 195
>gi|363752613|ref|XP_003646523.1| hypothetical protein Ecym_4685 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890158|gb|AET39706.1| hypothetical protein Ecym_4685 [Eremothecium cymbalariae
DBVPG#7215]
Length = 778
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 83/130 (63%), Gaps = 9/130 (6%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY +K ++K+ +++ +PL+L++ SD V + Y L
Sbjct: 582 ERTVGLKQLPKILSLHLKRFKYSEKHQSNIKLFNKIYYPLKLKVCTKSDTIVC--KNYEL 639
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF--WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
+VIH G GP GHY++I K HD WLL+DD+ V+ ID+ T+ F G +K T
Sbjct: 640 NGIVIHMGGGPQHGHYVAICK-HDMFGWLLYDDETVESIDEETVFKFVG----DEKDMTT 694
Query: 444 GYILFYQSRD 453
Y+LF++ D
Sbjct: 695 AYVLFFKEVD 704
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 29/149 (19%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD+ M QDAHEF NFL+N + E I + Q+ + P+ +V
Sbjct: 470 FDSTMHQDAHEFFNFLMNSLGEFIQRQLEQTQTE----IPE---------------NFVQ 510
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
+FQG + + KCL C+ V+S DE F D + + ++ +I L F+ E L NKF
Sbjct: 511 SLFQGTMINSIKCLTCDNVTSSDELFLDFAIPVNEDEEVNIQDMLSNFNQREMLNGANKF 570
Query: 192 KCDNCASYQEAQGPNISALEKEIGPDRFP 220
CD+C QEA E+ +G + P
Sbjct: 571 YCDSCNGLQEA--------ERTVGLKQLP 591
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
L S L D+F I + +G ++P + + LRKE FD+ M QDAHEF NFL+N + E
Sbjct: 433 LYSSLKDVFECIVESRSMLGVVSPVQLVNVLRKENILFDSTMHQDAHEFFNFLMNSLGE 491
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Query: 142 SETKCLNCETVSSK-DEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQ 200
SE + C+ V K +E+ +D DI + + QCL G + +F D +
Sbjct: 55 SELEGDGCKQVDKKYNEEKYDASPDINK---LQQCLCGQDDVNFI---QQFLGDAKDTLH 108
Query: 201 EAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
E P + E E P + + FGL NFGNTCY NSVLQ L+ R +L Y +
Sbjct: 109 ELFFPGLVTRESEHLPCG-DGSTKVFGLENFGNTCYCNSVLQCLFNLSELRTNILMYPIR 167
>gi|406601824|emb|CCH46597.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 788
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 82/148 (55%), Gaps = 34/148 (22%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILS-ERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
F + M QDAHEFLNFL+N + + I + + NA +
Sbjct: 349 FRSTMHQDAHEFLNFLLNEVIDTINTIHNTRKNA-------------------------L 383
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
HE+F+G+LT++TKCL CE VSS+DE F DL +D+ N ++ CL+ FS++E L NKF
Sbjct: 384 HELFEGLLTNQTKCLTCENVSSRDETFLDLSIDLTDNETLETCLKQFSASEMLNGGNKFY 443
Query: 193 CDNCASYQEAQGPNISALEKEIGPDRFP 220
CDNC S QEA EK++G + P
Sbjct: 444 CDNCHSLQEA--------EKKMGLRKLP 463
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 85/130 (65%), Gaps = 11/130 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD-DAVNPD---R 381
EK M ++KLP ILALHLKRFKY ++ R+VK+ ++ +PL L+L SD A P+ +
Sbjct: 454 EKKMGLRKLPKILALHLKRFKYSEEHQRNVKLFQKIKYPLYLKL--ESDIPAEKPEDGLK 511
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
Y L VV+H G GP+ GHY+++VK+ WLLFDD+ V+KID+S + F G + D
Sbjct: 512 FYQLYGVVVHIGGGPHHGHYVALVKTIQHGWLLFDDETVEKIDESFVLKFTGDSPDLA-- 569
Query: 441 SETGYILFYQ 450
T Y+LFYQ
Sbjct: 570 --TAYVLFYQ 577
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K +L + L DLF ++ + K G ++P I L+KE + F + M QDAHEFLNFL+N +
Sbjct: 309 KVSLFTSLKDLFESMIENDSKTGVVSPSYLIETLKKENELFRSTMHQDAHEFLNFLLNEV 368
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 25/34 (73%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
++ FG+ NFG TCY NS++Q LY+ K FR +L+
Sbjct: 121 DKVFGMENFGYTCYCNSIVQCLYYTKAFRLEILK 154
>gi|401626023|gb|EJS43991.1| ubp9p [Saccharomyces arboricola H-6]
Length = 769
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ N ++K+ +++ +PL L + + +V+ + Y L
Sbjct: 559 ERVVGLKQLPYILSLHLKRFKYSEEQNLNIKLFNKIRYPLSLDVSSTFESSVS--KKYEL 616
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I K+ + WLL+DD+ V+ I + T+ F G H T
Sbjct: 617 CGVVIHMGSGPQHGHYVCICKNEKYGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 672
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 673 YVLFYK 678
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSN-AKSKLSAPDGGGGDNHSSSGFEEPTWV 132
F+ MQQDAHEFLNFL+N +E I P N K+ NHSS F +
Sbjct: 440 FNTMMQQDAHEFLNFLLNDFSEFIEYHNPTVNFGPEKIL--------NHSSKNF-----I 486
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNK 190
+F+G LT+ +CL C+ ++S+DE F D ++++ + T I + L+ + E L NK
Sbjct: 487 SGLFKGTLTNRIRCLTCDNITSRDEPFLDFPIEVQGDDETDIQRILKSYQQREMLNGVNK 546
Query: 191 FKCDNCASYQEAQ 203
F C+ C QEA+
Sbjct: 547 FYCNKCYGLQEAE 559
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I +K G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 402 TLYNGLKDIFESITENKSLTGIVSPSEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 461
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 24/37 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG NFGNTCY NSVLQ LY FR VL+Y +
Sbjct: 143 KIFGYENFGNTCYCNSVLQCLYNISEFRCSVLQYPER 179
>gi|254578226|ref|XP_002495099.1| ZYRO0B03300p [Zygosaccharomyces rouxii]
gi|238937989|emb|CAR26166.1| ZYRO0B03300p [Zygosaccharomyces rouxii]
Length = 813
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 81/126 (64%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALHLKRFKY + N ++K+ ++V +PL L + ++V + Y L
Sbjct: 603 ERSVGLKQLPHTLALHLKRFKYSETKNSNIKLFNKVHYPLTLDVCSTYSNSVC--KKYEL 660
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K+ +F WLLFDD+ V+ + + T+ DF G +S + T
Sbjct: 661 SGIVVHMGGGPQHGHYVSLCKNDNFGWLLFDDETVESVSEKTVLDFVGDSS----TLTTA 716
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 717 YVLFYR 722
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 21/158 (13%)
Query: 50 LQDKISLGWECSLILELDLCSSDE--FDNYMQQDAHEFLNFLINHINEVILSERPQSNAK 107
+ + ++L S I +D+ + F+ M QDAHEFLNFL+N +++ + + AK
Sbjct: 463 ITENLALTGVVSPIKFVDILKKENVLFNTTMHQDAHEFLNFLLNELSDYL-----NNGAK 517
Query: 108 SKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK 167
S G D S F + +IFQG LT+ KC C+ ++S+DE F D +++
Sbjct: 518 S-------GKDDEEHSLNF-----IKDIFQGTLTNRVKCFTCDNITSRDEPFLDFPIEVP 565
Query: 168 QN--TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+ T I L+ F E L NKF C+ C QEA+
Sbjct: 566 DDSETDIQALLQNFDQREMLSGPNKFYCNVCCGLQEAE 603
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
L + L D+F I + G ++P KF+ L+KE F+ M QDAHEFLNFL+N +++
Sbjct: 452 LYTGLKDIFECITENLALTGVVSPIKFVDILKKENVLFNTTMHQDAHEFLNFLLNELSD 510
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
+ FG NFGNTCY NSVLQ LY FR ++L++ +N +
Sbjct: 129 KVFGFENFGNTCYCNSVLQCLYNMTEFRIQMLQHPERNSNTR 170
>gi|345306740|ref|XP_003428499.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Ornithorhynchus anatinus]
Length = 69
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/60 (78%), Positives = 54/60 (90%)
Query: 394 SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSRD 453
SGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GYILFYQSRD
Sbjct: 10 SGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYILFYQSRD 69
>gi|321258933|ref|XP_003194187.1| ubiquitin thiolesterase 9 [Cryptococcus gattii WM276]
gi|317460658|gb|ADV22400.1| Ubiquitin thiolesterase 9, putative [Cryptococcus gattii WM276]
Length = 732
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 98/158 (62%), Gaps = 23/158 (14%)
Query: 56 LGW---ECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAK--S 108
LGW + + +++ S+ F+N Q DAHEF + ++N + + + ++E+ ++ K +
Sbjct: 297 LGWGVVQPNDVMDAVKRSAPSFNNDDQHDAHEFFSVVVNTLAKEVEAVNEKLRAEGKEVA 356
Query: 109 KLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVS---SKDEDFFDLQVD 165
+++AP T++ +FQGI+TSETKCL+CETVS +++E+F DL VD
Sbjct: 357 QMTAPWAK-------------TFIEALFQGIITSETKCLSCETVSRTSAREEEFIDLSVD 403
Query: 166 IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
I+Q+ SIT CLR FSS E + KF C++C+ +QEA+
Sbjct: 404 IEQHCSITSCLRQFSSDEMMSGREKFSCESCSGHQEAK 441
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 88/131 (67%), Gaps = 7/131 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ +++K+LP ILA+HLKRF + + R +K+ +RV P L + +D+ NPD++Y+L
Sbjct: 441 KRSIRIKRLPPILAIHLKRFAHNENY-RAIKLFYRVNHPTTLIPPNTTDNCENPDQIYDL 499
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA+++H G+GP +GHY+++ ++ W++ DDD ++ I+++ +E + G + Q G
Sbjct: 500 VAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGNRTQGQ-----G 554
Query: 445 YILFYQSRDST 455
Y+LFYQ+R T
Sbjct: 555 YVLFYQARGIT 565
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 25/35 (71%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
ER +G+ NF N+C+ NSVLQALY C FRD V Y
Sbjct: 38 ERLWGIENFSNSCFCNSVLQALYACSTFRDFVEAY 72
>gi|50285067|ref|XP_444962.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524264|emb|CAG57855.1| unnamed protein product [Candida glabrata]
Length = 770
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALHLKRFKY ++ N ++K+ +V +PL+L++ + +++ + Y L
Sbjct: 558 ERVVGLKQLPKTLALHLKRFKYSEQQNSNIKLFDKVSYPLDLKVSSTFNPSIS--KNYEL 615
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHYIS+ K+ F WLLFDD+ V+ I + + + G + + T
Sbjct: 616 SGIVVHMGGGPQHGHYISLCKNEKFGWLLFDDETVEAISEQAVLQYTG----DKDTMTTA 671
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 672 YVLFYQ 677
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFL FL+N I++ L ++ ++ SK+ G ++ + F V
Sbjct: 433 FSSMMHQDAHEFLIFLLNEISD-FLDKQNKNALNSKIYDSSQGRRNSGTVKNF-----VS 486
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT--SITQCLRGFSSTETLCSDNKF 191
+IFQG LT+ KCL C+ +++DE F D +++++N I + L F E L NKF
Sbjct: 487 DIFQGTLTNRIKCLTCDNTTARDEPFLDFPIEVQENVDIDIQEILESFHQKEMLHGPNKF 546
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 547 YCDECCGLQEAE 558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
L + L D+F I H G + P FI L++E F + M QDAHEFL FL+N I++
Sbjct: 396 LYNGLKDIFECITEHSYLTGVVTPSAFIEMLKRENVLFSSMMHQDAHEFLIFLLNEISD 454
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR+ +L Y
Sbjct: 148 KIFGYENFGNTCYCNSVLQCLYNLPEFRNDMLRY 181
>gi|349577800|dbj|GAA22968.1| K7_Ubp9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 754
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|365766117|gb|EHN07618.1| Ubp9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 754
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+ +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLXDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+ +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLXDFSE 449
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|6320945|ref|NP_011024.1| Ubp9p [Saccharomyces cerevisiae S288c]
gi|731043|sp|P39967.1|UBP9_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 9; AltName:
Full=Deubiquitinating enzyme 9; AltName: Full=Ubiquitin
thioesterase 9; AltName:
Full=Ubiquitin-specific-processing protease 9
gi|603336|gb|AAB64653.1| Ubp9p: ubiquitin carboxyl-terminal hydrolase [Saccharomyces
cerevisiae]
gi|285811731|tpg|DAA07759.1| TPA: Ubp9p [Saccharomyces cerevisiae S288c]
Length = 754
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRMRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|403214178|emb|CCK68679.1| hypothetical protein KNAG_0B02370 [Kazachstania naganishii CBS
8797]
Length = 753
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 83/132 (62%), Gaps = 7/132 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ + +KKLP ILALHLKRFKY + N ++K+ +++ +PL L + D +V+ + Y L
Sbjct: 540 QRVVGLKKLPRILALHLKRFKYSEAQNTNIKLFNKITYPLFLEVASKFDPSVS--KKYEL 597
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VV+H G GP GHY+S+ K+ +F WL FDD+ V+ +D+ + +F + +S T
Sbjct: 598 TGVVLHMGGGPQHGHYVSVCKTDNFGWLFFDDETVETLDEPQVLNF----TGDTTTSTTA 653
Query: 445 YILFYQSRDSTD 456
Y+LFY+ D D
Sbjct: 654 YVLFYKETDEGD 665
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEFLNFL N +++ N KL+ D N S F ++
Sbjct: 420 FNTMMHQDAHEFLNFLFNDLSDFT------DNYNRKLA--DTRDVPNQLRSNF-----IN 466
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN----TSITQCLRGFSSTETLCSDN 189
++FQG TS+ +CL C++V+S DE F D ++++ + T I + LR F TE L N
Sbjct: 467 DLFQGTQTSKVRCLTCDSVTSHDERFLDFPIELEDSKDAATDIQEQLREFCQTELLHGAN 526
Query: 190 KFKCDNCASYQEAQ 203
KF C+ C QEAQ
Sbjct: 527 KFYCNECCGLQEAQ 540
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N ++ L L D+F +I + G ++P FI L++E F+ M QDAHEFLNFL
Sbjct: 376 NGEDISNLYHGLKDIFESITENNALTGVVSPVNFIDILKRENILFNTMMHQDAHEFLNFL 435
Query: 321 INHINE 326
N +++
Sbjct: 436 FNDLSD 441
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NS+LQ L+ FR+ +L++
Sbjct: 112 KIFGYENFGNTCYCNSILQCLFNLTEFRNSILQF 145
>gi|151944815|gb|EDN63074.1| ubiquitin carboxyl-terminal hydrolase [Saccharomyces cerevisiae
YJM789]
Length = 754
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|190405662|gb|EDV08929.1| ubiquitin carboxyl-terminal hydrolase 9 [Saccharomyces cerevisiae
RM11-1a]
gi|259146022|emb|CAY79282.1| Ubp9p [Saccharomyces cerevisiae EC1118]
Length = 754
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|392299801|gb|EIW10893.1| Ubp9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 754
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|256269940|gb|EEU05197.1| Ubp9p [Saccharomyces cerevisiae JAY291]
Length = 754
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D +++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVHGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|401841872|gb|EJT44191.1| UBP9-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 748
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRF+Y + ++K+ +++++PL L + D +++ + Y L
Sbjct: 538 ERIVGLKQLPYILSLHLKRFEYSEGQQSNIKLFNKILYPLSLDVSSTFDSSIS--KKYEL 595
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I K+ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 596 SGVVIHMGSGPQHGHYVCICKNEKFGWLLYDDETVESIREETVLKFTG----HPGDQTTA 651
Query: 445 YILFYQSRDSTDA 457
Y+LFY+ +A
Sbjct: 652 YVLFYKETHVNEA 664
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I ER S + DN ++
Sbjct: 419 FNTMMQQDAHEFLNFLLNDFSEYI--ERRNSGMQFGPKKDIVNANDN----------FIA 466
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + LR + E L NKF
Sbjct: 467 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDDETDIQKILRSYHQREMLNGVNKF 526
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 527 YCNKCYGLQEAE 538
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 381 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 440
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 189 NKFKCDNCASYQEAQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALY 245
N+ CD+ +Y++ S++ D P + + FG NFGNTCY NSVLQ LY
Sbjct: 86 NEIGCDSPITYEDRALGTESSILFTAMTDLMPYGDGSNKVFGYENFGNTCYCNSVLQCLY 145
Query: 246 FCKPFRDRVLEY 257
FR VL Y
Sbjct: 146 NISEFRCNVLRY 157
>gi|6978939|dbj|BAA90762.1| ubiquitin carboxyl-terminal hydrolase [Pichia anomala]
Length = 443
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 81/147 (55%), Gaps = 32/147 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLNFL+N EVI D +H +H
Sbjct: 40 FRSTMHQDAHEFLNFLLN---EVI----------------DTINNLHHCRKN-----ALH 75
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F+G+LT++TKCL CE VSS+DE F DL +D+ N ++ CL+ FS++E L NKF C
Sbjct: 76 DLFEGLLTNQTKCLTCENVSSRDETFLDLSIDLTDNETLETCLKQFSASEMLNGSNKFYC 135
Query: 194 DNCASYQEAQGPNISALEKEIGPDRFP 220
DNC S QEA EK++G + P
Sbjct: 136 DNCHSLQEA--------EKKMGLRKLP 154
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 81/131 (61%), Gaps = 13/131 (9%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL-----FHLSDDAVNPD 380
EK M ++KLP ILALHLKRFKY ++ R+VK+ ++ +PL +L +D +
Sbjct: 145 EKKMGLRKLPKILALHLKRFKYSEEQQRNVKLFQKIKYPLYFKLESDIPAEKKEDGL--- 201
Query: 381 RMYNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
+ Y L VV+H G GP+ GHY+++VK+ WLLFDD+ V+KID+ + F G + D
Sbjct: 202 KFYQLYGVVVHIGGGPHHGHYVALVKTIQHGWLLFDDETVEKIDEKFVLRFTGDSPDLA- 260
Query: 440 SSETGYILFYQ 450
T Y+LFYQ
Sbjct: 261 ---TAYVLFYQ 268
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+L + L DLF ++ H+ K G ++P + L+KE + F + M QDAHEFLNFL+N +
Sbjct: 2 SLYTALKDLFESMIEHESKTGVVSPSHLVETLKKENELFRSTMHQDAHEFLNFLLNEV 59
>gi|294656985|ref|XP_002770359.1| DEHA2D18766p [Debaryomyces hansenii CBS767]
gi|199431876|emb|CAR65713.1| DEHA2D18766p [Debaryomyces hansenii CBS767]
Length = 784
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 12/138 (8%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA-VNPDR---- 381
K +K+K LP IL ++ KRFKY + +++ VK+ + +P LRLF+ + + N D+
Sbjct: 434 KTIKLKDLPEILVINFKRFKYDENVDKMVKLFDSISYPSTLRLFNTTTTSKKNEDKSEDD 493
Query: 382 --MYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQ 438
+Y+L A+V+H G GP GHYIS+ K WLLFDD+ V+ +D + + FFG +
Sbjct: 494 FSLYDLYALVVHIGGGPMHGHYISLCKIKAKLWLLFDDETVELVDDAYVMRFFG----NG 549
Query: 439 KSSETGYILFYQSRDSTD 456
+ YILFYQ D+TD
Sbjct: 550 PGLASAYILFYQKCDTTD 567
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 72/130 (55%), Gaps = 27/130 (20%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
N M DAHEF N+LIN I E + E N W +++
Sbjct: 327 NNMHHDAHEFFNYLINEIIECLDKENGLQN------------------------NWCNKL 362
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKFK 192
FQG++T+ETKCL+CETV+SK+E F DL VD+ + + S+T L FS +ETL NKF
Sbjct: 363 FQGLITNETKCLSCETVTSKEETFLDLSVDVPPGESSYSLTYSLNNFSRSETLTHQNKFY 422
Query: 193 CDNCASYQEA 202
C+ C+S QEA
Sbjct: 423 CNTCSSLQEA 432
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHINE 326
LL L D+F + +K + G ++P FI +L+ + F N M DAHEF N+LIN I E
Sbjct: 287 LLYSLKDIFECMIENKSQTGVVSPTYFINKLKDKNYLFRQNNMHHDAHEFFNYLINEIIE 346
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
+ FG+ NFGNTCY NS+LQ L++ + FR ++ ++K
Sbjct: 22 KIFGMENFGNTCYCNSILQCLFYTENFRTQLAQHK 56
>gi|344303371|gb|EGW33645.1| hypothetical protein SPAPADRAFT_55482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 684
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 78/124 (62%), Gaps = 6/124 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+ KLP +L ++ KRFKY + +++ VK+ + +P +L+LF+ +DD +Y L
Sbjct: 425 KTIKLNKLPEVLVINFKRFKYDETVDKMVKLFDSISYPFKLKLFNTTDDD-QEQHLYELY 483
Query: 387 AVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G GP GHY+SI K+ + WLLFDD+ V+ +D S + FFG + + Y
Sbjct: 484 ALVVHIGGGPMHGHYVSICKTKYGLWLLFDDETVELVDDSYVMRFFG----NGPGLASAY 539
Query: 446 ILFY 449
ILFY
Sbjct: 540 ILFY 543
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 29/131 (22%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSE-RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHE 134
N M DAHEF N+LIN I E + E P++N W +
Sbjct: 318 NNMHHDAHEFFNYLINEIIETLNREVGPENN-------------------------WCNN 352
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDI---KQNTSITQCLRGFSSTETLCSDNKF 191
IF+G +T+ETKCL+CETVSS+ E F DL +DI + S++ L FS +ETL + NKF
Sbjct: 353 IFRGSITNETKCLSCETVSSRHEYFLDLSIDIPPGESAYSLSYSLNNFSKSETLTNQNKF 412
Query: 192 KCDNCASYQEA 202
C+ C+S QEA
Sbjct: 413 YCNTCSSLQEA 423
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEF-DNYMQQDAHEFLNFLINHINE 326
L+ L D+F ++ +K +G ++P FI +L+ F N M DAHEF N+LIN I E
Sbjct: 278 LMYALKDIFESMIENKSTIGVVSPNYFIQKLKDRNYLFRQNNMHHDAHEFFNYLINEIIE 337
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
+ FG+ NFGNTCY NS+LQ LY+ + FR ++ +K
Sbjct: 22 KIFGMENFGNTCYCNSILQCLYYTENFRKNLVSHK 56
>gi|156849075|ref|XP_001647418.1| hypothetical protein Kpol_1018p93 [Vanderwaltozyma polyspora DSM
70294]
gi|156118104|gb|EDO19560.1| hypothetical protein Kpol_1018p93 [Vanderwaltozyma polyspora DSM
70294]
Length = 755
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 88/140 (62%), Gaps = 7/140 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K LP IL+LHLKRFKY ++ N ++K+ +++ +P EL + D +++ + Y L
Sbjct: 541 ERIVGIKHLPKILSLHLKRFKYSEENNANIKLFNKITYPSELHVRSTFDRSIS--KKYEL 598
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
++IH G+GP GHY+++ K+ F WLL+DD+ V+ + + + G ++D T
Sbjct: 599 SGIIIHLGAGPQHGHYVAMCKTEKFGWLLYDDETVEAVLEKDVLRHVGDSNDLA----TA 654
Query: 445 YILFYQSRDSTDARTMNSND 464
YILFY++ ++ D+ N+ D
Sbjct: 655 YILFYKTIETQDSDMENNGD 674
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 20/132 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD M QDAHEFLNFL+N ++E I +S L + +N ++
Sbjct: 428 FDTGMHQDAHEFLNFLLNELSEYI--------DRSNLKIEETEKTEN----------FIK 469
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
IFQG LT++ +CL C+ V+S+DE F DL +++K T I + L + E L NKF
Sbjct: 470 NIFQGTLTNKIRCLTCDNVTSRDEPFLDLPIEVKSRNETDIKKALSNYHQREMLNGSNKF 529
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 530 YCDGCCGLQEAE 541
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 252 DRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQ 311
DR+L N+ ++ + + L D+F I ++ G ++P + I L+KE FD M Q
Sbjct: 380 DRLL-----NQASESNMYNGLKDIFLTIKGNRYLTGVVSPSELIEILKKENVLFDTGMHQ 434
Query: 312 DAHEFLNFLINHINE 326
DAHEFLNFL+N ++E
Sbjct: 435 DAHEFLNFLLNELSE 449
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 207 ISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+ L ++G R + + FG NFGNTCY NSVLQ LY RD ++ Y + K
Sbjct: 110 MQELNNQLG--RIDSSTKVFGFENFGNTCYCNSVLQCLYNFSELRDNLILYPEEAK 163
>gi|156045637|ref|XP_001589374.1| hypothetical protein SS1G_10009 [Sclerotinia sclerotiorum 1980]
gi|154694402|gb|EDN94140.1| hypothetical protein SS1G_10009 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 396
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 25/137 (18%)
Query: 74 FDNYMQQDAHEFLNFLINH-INEVILSERPQSNAK--SKLSAPDGGGGDNHS-------- 122
F M QDAHEF ++N IN V + NA+ AP GG N S
Sbjct: 245 FRTSMHQDAHEFYGLMLNAVINNV------EDNARHLRDSVAPQDKGGINDSMTAAVRSV 298
Query: 123 ------SSGFEEP--TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQ 174
+SG + P WVH+IF+G + SETKCL CET S +DE F DL +D+++N+S+T
Sbjct: 299 ADSMGLASGVQSPGTKWVHDIFEGKMVSETKCLTCETTSQRDETFLDLSIDLEKNSSVTS 358
Query: 175 CLRGFSSTETLCSDNKF 191
CL+ FS+ E LC NKF
Sbjct: 359 CLQKFSAEEMLCEKNKF 375
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ET + L D+F + +H + G ++P++F+ R++ + F M QDAHEF ++N +
Sbjct: 205 EETTFTALKDIFTAMISHPSRTGVVSPQRFLEVFRRDNEMFRTSMHQDAHEFYGLMLNAV 264
>gi|367001763|ref|XP_003685616.1| hypothetical protein TPHA_0E00870 [Tetrapisispora phaffii CBS 4417]
gi|357523915|emb|CCE63182.1| hypothetical protein TPHA_0E00870 [Tetrapisispora phaffii CBS 4417]
Length = 715
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 81/129 (62%), Gaps = 7/129 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +KKLP L LHLKRFKY ++ N ++K+ +++ +PL L++ S+ ++ + Y+L
Sbjct: 512 ERIVGLKKLPETLILHLKRFKYSEEQNSNIKLFNKINYPLVLQVSSTSNSDIS--KSYDL 569
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+SI K+ + WLLFDD+VV I + ++ F G + T
Sbjct: 570 TGIVLHLGGGPQHGHYVSICKNEKYGWLLFDDEVVVSITEESVLKFVG----DPTTLTTA 625
Query: 445 YILFYQSRD 453
Y+L Y+ +D
Sbjct: 626 YLLVYKLKD 634
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 21/149 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F++ M QDAHEFLNFL+N I++ I +SN + + GG E +++
Sbjct: 392 FNSMMHQDAHEFLNFLLNQISDNI-----ESNMNNPNNDNGEFGGLKF------ERNFIN 440
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
++FQG++ T+CL C+ ++S++E F D +++ N T+I + L +S E L NKF
Sbjct: 441 DLFQGVIKYTTRCLTCDNITSREELFLDFAIEVSNNEETNIQEILGDYSQREMLNGSNKF 500
Query: 192 KCDNCASYQEAQGPNISALEKEIGPDRFP 220
CD C+ QEA E+ +G + P
Sbjct: 501 FCDCCSGLQEA--------ERIVGLKKLP 521
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 259 AKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
A N K + S L D+F I + G ++PK+ I L++E F++ M QDAHEFLN
Sbjct: 346 ALNTNGKSNMYSALKDIFDAITENNHLTGIVSPKELIETLKRENMMFNSMMHQDAHEFLN 405
Query: 319 FLINHINE 326
FL+N I++
Sbjct: 406 FLLNQISD 413
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 23/34 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY RD V++Y
Sbjct: 110 KVFGYENFGNTCYCNSVLQCLYNIPELRDNVIKY 143
>gi|367011513|ref|XP_003680257.1| hypothetical protein TDEL_0C01570 [Torulaspora delbrueckii]
gi|359747916|emb|CCE91046.1| hypothetical protein TDEL_0C01570 [Torulaspora delbrueckii]
Length = 765
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 82/126 (65%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALHLKRFKY ++ N ++K+ +++ +PL+L + +V+ + Y L
Sbjct: 560 ERKVGLKQLPHTLALHLKRFKYSEEQNCNIKLFNKIHYPLKLDVCSSFCSSVS--KKYEL 617
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K+ +F WLLFDD+ V+ + +ST+ F G + S T
Sbjct: 618 TGIVVHMGGGPQHGHYVSLCKNDNFGWLLFDDETVEAVHESTVSKFIG----DRDSLTTA 673
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 674 YVLFYK 679
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 31/151 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE--RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
F+ M QDAHEFLNFL+N ++E I + Q AK DN +
Sbjct: 446 FNTTMHQDAHEFLNFLLNELSEYIQKDIDSIQDPAKKY---------DN----------F 486
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDN 189
++ +FQG LT KCL C+ V+S+DE F D ++++ + T I LR + E L N
Sbjct: 487 INGLFQGTLTYRIKCLTCDNVTSRDEPFLDFPIEVQDDEETDIQALLRSYQQREMLSGSN 546
Query: 190 KFKCDNCASYQEAQGPNISALEKEIGPDRFP 220
KF CD C QEA E+++G + P
Sbjct: 547 KFYCDECCGLQEA--------ERKVGLKQLP 569
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N+ L + L D+F I + G ++P F+ L++E F+ M QDAHEFLNFL
Sbjct: 402 NESKVSNLYNSLKDIFECITENHSLTGVVSPISFVETLKRENLLFNTTMHQDAHEFLNFL 461
Query: 321 INHINEKCMK 330
+N ++E K
Sbjct: 462 LNELSEYIQK 471
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK 265
+ FG NFGNTCY NSVLQ LY FR +L++ ++ K K
Sbjct: 122 KVFGYENFGNTCYCNSVLQCLYNLTEFRLLLLQHLERDPKIK 163
>gi|365987293|ref|XP_003670478.1| hypothetical protein NDAI_0E04180 [Naumovozyma dairenensis CBS 421]
gi|343769248|emb|CCD25235.1| hypothetical protein NDAI_0E04180 [Naumovozyma dairenensis CBS 421]
Length = 827
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
++ + +KKLP LALHLKRFKY ++ ++K+ +++V+PLEL + ++ + Y L
Sbjct: 617 QRTVGLKKLPNTLALHLKRFKYSEEHFTNIKLFNKIVYPLELNVSSSFTSSI--SKKYKL 674
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H GS P +GHY++I K+ + WLLFDD+ I++ + F G +KS T
Sbjct: 675 QGIVVHMGSSPQQGHYVAICKTDKYGWLLFDDETASWINEEEVLSFIG----DEKSQNTA 730
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 731 YVLFYE 736
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 40/172 (23%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE--RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
FD M QDAHEF NFLIN +++ I ++ PQ + +
Sbjct: 507 FDTMMHQDAHEFFNFLINQLSDYIQTDCANPQDD------------------------NF 542
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---TSITQCLRGFSSTETLCSD 188
++E FQGILT+ KCL+C+ V+S+DE F D ++++++ T I+ L+ + E L
Sbjct: 543 INESFQGILTNRIKCLSCDNVTSRDEPFLDFPIEVQEHKEFTDISTILKSYHQKEMLGGH 602
Query: 189 NKFKCDNCASYQEAQG-------PNISALEKEIGPDRFPPNERYFGLVNFGN 233
NKF C C + QEAQ PN AL + RF +E +F + N
Sbjct: 603 NKFYCSQCCTLQEAQRTVGLKKLPNTLALHLK----RFKYSEEHFTNIKLFN 650
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
NK L + L D+F I +K G ++P +F+ L+KE FD M QDAHEF NFL
Sbjct: 463 NKTRDSNLYNGLKDIFECIIENKFLTGVVSPTEFVQLLKKENVLFDTMMHQDAHEFFNFL 522
Query: 321 INHINE 326
IN +++
Sbjct: 523 INQLSD 528
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+ FG NFGNTCY NSVLQ LY F+ +L+
Sbjct: 153 KIFGYENFGNTCYCNSVLQCLYHLDDFKLNLLK 185
>gi|365762165|gb|EHN03770.1| Ubp13p, partial [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 685
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 79/128 (61%), Gaps = 7/128 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 486 ERLVGLKQLPDTLALHLKRFKYSEKQNCNIKLFNDIHYPLTLNVCSSINSEVC--QKYEL 543
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 544 AGIVVHMGGGPQHGHYVSLCKHEIFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 599
Query: 445 YILFYQSR 452
Y+LFY+++
Sbjct: 600 YVLFYKTK 607
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 11/132 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K K++A + G DN S + ++
Sbjct: 364 FNTSMHQDAHEFFNFLLNELSEYIEREN-----KKKVTA-NNNGDDNVLS---KTTNFIS 414
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
+FQG LT++ KCL C+ V+S+DE F D ++++ + T I L+ + E L NKF
Sbjct: 415 NLFQGTLTNQIKCLTCDNVTSRDEPFLDFPIEVQGDEETDIQAILKSYHQREMLNGPNKF 474
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 475 YCDKCCGLQEAE 486
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+K++L S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL+N
Sbjct: 323 DKDSLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTSMHQDAHEFFNFLLNE 382
Query: 324 INE 326
++E
Sbjct: 383 LSE 385
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG NFGNTCY NSVLQ LY R+ +L++ K
Sbjct: 76 KVFGYENFGNTCYCNSVLQCLYNLSSVRESILQFPEK 112
>gi|410084683|ref|XP_003959918.1| hypothetical protein KAFR_0L01730 [Kazachstania africana CBS 2517]
gi|372466511|emb|CCF60783.1| hypothetical protein KAFR_0L01730 [Kazachstania africana CBS 2517]
Length = 701
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 9/125 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L+LHLKRFKY + ++K+ +++ +P L + D ++ + Y L
Sbjct: 504 ERLVGLKRLPKTLSLHLKRFKYSEDKMANIKLFNKIDYPTFLTVSSTFDSKLS--KRYEL 561
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+ VIH G GP GHYIS+ K+ F WLLFDD+ V+ +D+ T+ F G SD T
Sbjct: 562 ASAVIHLGDGPQYGHYISLCKTETFGWLLFDDETVEAVDEQTVLSFTGENSD------TA 615
Query: 445 YILFY 449
Y+LFY
Sbjct: 616 YVLFY 620
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 30/149 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD M QDAHEFLNFL+N++++ I + + + K DN +V
Sbjct: 393 FDTTMHQDAHEFLNFLMNNLSDYIWANNKKGDLKI----------DN----------FVQ 432
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
+IFQG LT++ +C C++++S +E F D +++K +N +I + L F E L +KF
Sbjct: 433 DIFQGSLTNQIRCYTCDSITSTEEPFLDFAIEVKEDENLNIQRHLESFHQRELLNGSDKF 492
Query: 192 KCDNCASYQEAQGPNISALEKEIGPDRFP 220
CD C QEA E+ +G R P
Sbjct: 493 YCDRCCGLQEA--------ERLVGLKRLP 513
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
NKK +L L D+F G I+P +FI L+KE FD M QDAHEFLNFL
Sbjct: 349 NKKQDSSLYYALKDIFECAVETNFLSGVISPVQFIDTLKKENVLFDTTMHQDAHEFLNFL 408
Query: 321 INHINE 326
+N++++
Sbjct: 409 MNNLSD 414
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ FG NFGNTCY NS+LQ + FR +L + + N
Sbjct: 125 KIFGYENFGNTCYCNSILQCFFNHSVFRTSMLSFPSSN 162
>gi|401626699|gb|EJS44624.1| ubp13p [Saccharomyces arboricola H-6]
Length = 747
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 80/129 (62%), Gaps = 11/129 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD--RMY 383
E+ + +K+LP LALHLKRFKY +K N ++K+ + + +PL L + ++N + + Y
Sbjct: 548 ERLVGLKQLPDTLALHLKRFKYSEKQNCNIKLFNNIHYPLTLSVC----SSINAEVCQKY 603
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L +V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + +
Sbjct: 604 ELAGIVVHMGGGPQHGHYVSLCKHKKFGWLLFDDETVETVKEDTVLEFTGESPNMA---- 659
Query: 443 TGYILFYQS 451
T Y+LFY++
Sbjct: 660 TAYVLFYKA 668
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD M QDAHEF NFL+N ++E I E Q S ++ DG G + ++
Sbjct: 427 FDTTMHQDAHEFFNFLLNELSEYIEREN-QKMVASDINN-DGALGKTTN--------FIS 476
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
+FQG LT++ KCL C+ ++S+DE F D ++++ + T I L+ + E L NKF
Sbjct: 477 NLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQAILKSYHQREMLNGSNKF 536
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 537 YCDECCGLQEAE 548
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G I+P F+ L++E FD M QDAHEF NFL
Sbjct: 383 NGNDKATLYSSLKDIFECITENTYLTGVISPSSFVDVLKRENVLFDTTMHQDAHEFFNFL 442
Query: 321 INHINE 326
+N ++E
Sbjct: 443 LNELSE 448
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET 267
+ FG NFGNTCY NSVLQ LY R+ +L++ K + + T
Sbjct: 139 KVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFPEKPRGSSGT 182
>gi|323356239|gb|EGA88043.1| Ubp13p [Saccharomyces cerevisiae VL3]
Length = 728
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>gi|151946330|gb|EDN64552.1| ubiquitin carboxyl-terminal hydrolase [Saccharomyces cerevisiae
YJM789]
Length = 747
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K +++ +
Sbjct: 173 KKPRESDQ 180
>gi|323334725|gb|EGA76098.1| Ubp13p [Saccharomyces cerevisiae AWRI796]
Length = 742
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>gi|349576315|dbj|GAA21486.1| K7_Ubp13p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 747
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K +++ +
Sbjct: 173 KKPRESDQ 180
>gi|365767019|gb|EHN08507.1| Ubp13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 562
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 362 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 419
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 420 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 475
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 476 YVLFYKA 482
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 241 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 290
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 291 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 350
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 351 YCDECCGLQEAE 362
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 197 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 256
Query: 321 INHINE 326
+N ++E
Sbjct: 257 LNELSE 262
>gi|330443411|ref|NP_009486.3| Ubp13p [Saccharomyces cerevisiae S288c]
gi|342187114|sp|P38187.3|UBP13_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 13; AltName:
Full=Deubiquitinating enzyme 13; AltName: Full=Ubiquitin
thioesterase 13; AltName:
Full=Ubiquitin-specific-processing protease 13
gi|329136709|tpg|DAA07054.2| TPA: Ubp13p [Saccharomyces cerevisiae S288c]
Length = 747
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>gi|256272732|gb|EEU07705.1| Ubp13p [Saccharomyces cerevisiae JAY291]
gi|259144780|emb|CAY77719.1| Ubp13p [Saccharomyces cerevisiae EC1118]
Length = 747
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>gi|323310152|gb|EGA63344.1| Ubp13p [Saccharomyces cerevisiae FostersO]
Length = 536
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 341 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 398
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 399 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEXTVLEFTGESPNMA----TA 454
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 455 YVLFYKA 461
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 220 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASDI----NSDSEPSKSKNFIS 269
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 270 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 329
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 330 YCDECCGLQEAE 341
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 176 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 235
Query: 321 INHINE 326
+N ++E
Sbjct: 236 LNELSE 241
>gi|343173231|gb|AEL99318.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
gi|343173233|gb|AEL99319.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 82
Score = 96.3 bits (238), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Query: 208 SALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN--- 264
S LEK +G ++FP ERYFGL NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 6 SKLEKALG-EQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKNTVDA 64
Query: 265 KETLLSCLADLFHNIATH 282
+E LL+CLADLF I +
Sbjct: 65 EENLLTCLADLFSQINSQ 82
>gi|207347896|gb|EDZ73926.1| YBL067Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 325
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 125 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 182
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 183 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 238
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 239 YVLFYKA 245
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D S S ++
Sbjct: 4 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASDINSDSEPSKS----KNFIS 53
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 54 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 113
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 114 YCDECCGLQEAE 125
>gi|190408889|gb|EDV12154.1| ubiquitin carboxyl-terminal hydrolase 13 [Saccharomyces cerevisiae
RM11-1a]
Length = 747
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKVETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>gi|392301114|gb|EIW12203.1| Ubp13p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 747
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 76/127 (59%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEF----TSESPNMATA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K +++ +
Sbjct: 173 KKPRESDQ 180
>gi|366993851|ref|XP_003676690.1| hypothetical protein NCAS_0E02610 [Naumovozyma castellii CBS 4309]
gi|342302557|emb|CCC70331.1| hypothetical protein NCAS_0E02610 [Naumovozyma castellii CBS 4309]
Length = 717
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 75/126 (59%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ +++KKLP L LHLKRFKY ++ ++K+ +V +PL L + S+ Y L
Sbjct: 510 ERAVELKKLPDTLILHLKRFKYSEQQLSNIKLFSKVYYPLILEVN--SNYKCTDTIKYEL 567
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+VIH G GP GHY+++ K+ + WL +DD+ V+ + + T+ F G +K+ T
Sbjct: 568 SGIVIHVGDGPQMGHYVALCKTEKYGWLFYDDETVESVSEETVLKFIG----DEKTQSTA 623
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 624 YVLFYK 629
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 27/132 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD+ M QDAHEFLNF++N S+R + ++K +++
Sbjct: 404 FDSMMHQDAHEFLNFMLND-----FSDRLDRDNQAK--------------------NFIN 438
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
EIFQG LT++ +CL C+ V+S++E F DL +++K+N T I + L+ +S E L NKF
Sbjct: 439 EIFQGTLTNKVRCLTCDNVTSREEAFLDLPIEVKENGDTDIQRVLKYYSQREMLNGSNKF 498
Query: 192 KCDNCASYQEAQ 203
C C + QEA+
Sbjct: 499 NCSQCCALQEAE 510
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
L + L DLF I H G ++P +F+ LR+E FD+ M QDAHEFLNF++N +++
Sbjct: 367 LYNTLKDLFECITEHSSLTGIVSPVQFVNMLRRENVLFDSMMHQDAHEFLNFMLNDFSDR 426
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ FG NFGNTCY NSVLQ LY FR +L+Y +N
Sbjct: 124 KVFGYENFGNTCYCNSVLQCLYNLPEFRLNILQYPERN 161
>gi|444318862|ref|XP_004180088.1| hypothetical protein TBLA_0D00620 [Tetrapisispora blattae CBS 6284]
gi|387513130|emb|CCH60569.1| hypothetical protein TBLA_0D00620 [Tetrapisispora blattae CBS 6284]
Length = 1171
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 11/128 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMY 383
E+ + +K+LP L+LHLKRFKY ++ N ++K+ ++V +PL L + + NP ++ Y
Sbjct: 951 ERIVGLKQLPKTLSLHLKRFKYSEEQNCNIKLFNKVNYPLYLDV----SSSFNPNINKRY 1006
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L +V+H G GP GHY++I K+ F WLL DD+ V+ I + T+ G + D
Sbjct: 1007 ELNGIVVHMGGGPQHGHYVAICKNDKFGWLLMDDETVETISEETVLRCKGDSKD----LT 1062
Query: 443 TGYILFYQ 450
T Y+LFY+
Sbjct: 1063 TAYVLFYK 1070
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN-----HSSSGFEE 128
F++ M QDAHEFLNFL+N +++ ++ + N K ++ N H+S+ +E
Sbjct: 807 FNSRMHQDAHEFLNFLLNELSDYMIKCINEENLKKTIANNPNTDTHNTLTQSHTSNNQQE 866
Query: 129 --------PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRG 178
++ ++F+G L ++T+CL C+ V+S++E F D +++K + T+I L+
Sbjct: 867 EDNNLPRMSDFISDLFRGTLINKTRCLTCDNVTSREEPFLDFPIEVKDDTETNIQTELKS 926
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
+ E L NKF CD C QEA+
Sbjct: 927 YHQREMLNGSNKFYCDECGGLQEAE 951
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N+ K L + L D+F I + G ++P +F+ L+++ F++ M QDAHEFLNFL
Sbjct: 763 NESGKSNLYNGLKDIFECITENHYLTGIVSPVEFVEILKRDNILFNSRMHQDAHEFLNFL 822
Query: 321 INHINE---KCMKVKKLPMILA 339
+N +++ KC+ + L +A
Sbjct: 823 LNELSDYMIKCINEENLKKTIA 844
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG NFGNTCY NSVLQ LY R +L++ +
Sbjct: 514 KVFGYENFGNTCYCNSVLQCLYNMTNLRTNILQFPPR 550
>gi|403350395|gb|EJY74658.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 264
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 3/132 (2%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR-- 381
I K M +K+ P IL +HLKRFK + R+ K+SHR+ FP ELR+ D+ +
Sbjct: 130 IATKQMMIKQKPQILIIHLKRFKIDPQTLRYQKLSHRIPFPTELRIESALDEGEDHQNSL 189
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+Y+L +V+H G G GHY ++VKS W+ DD V +D+ ++ +GL S +++S
Sbjct: 190 LYHLKGIVVHVGQGLLYGHYFALVKSQGRWIKMDDTGVAIVDEKFMKALYGLPSSNEQSG 249
Query: 442 -ETGYILFYQSR 452
T Y+L Y S+
Sbjct: 250 WPTAYMLLYDSQ 261
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+FDN D+HEFL +++NHI++ + ++ ++ DG V
Sbjct: 10 QFDNDEHHDSHEFLIWILNHISDEL---------QADVNDQDGKKPQKLKEKSDAAYNLV 60
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
E+F+G L S+T C CE + ++E F L +DI++ S+ C++ FS E + + +KF
Sbjct: 61 SELFEGKLVSKTSCCMCEGSNEREEAFMALSLDIEKGKSVNHCIKQFSHKEWMVNRDKFY 120
Query: 193 CDN-CASYQEA 202
C++ C + Q A
Sbjct: 121 CEHSCHTKQIA 131
>gi|443429619|gb|AGC92764.1| ubiquitin specific peptidase 46, partial [Sus scrofa]
Length = 82
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 2 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 58
Query: 153 SSKDEDFFDLQVDIKQNTSITQCL 176
SSKDEDF DL VD++QNTSIT CL
Sbjct: 59 SSKDEDFLDLSVDVEQNTSITHCL 82
>gi|367007862|ref|XP_003688660.1| hypothetical protein TPHA_0P00680 [Tetrapisispora phaffii CBS 4417]
gi|357526970|emb|CCE66226.1| hypothetical protein TPHA_0P00680 [Tetrapisispora phaffii CBS 4417]
Length = 727
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 81/130 (62%), Gaps = 7/130 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L +HLKRFKY ++ N ++K+ ++V +P L + + DD+++ + Y L
Sbjct: 532 ERLIGIKELPKHLVVHLKRFKYCEEKNCNIKLFNKVNYPFTLNISSVFDDSIS--KKYEL 589
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
++V+H G P GHY+++ K + WL++DD+ V Q+ ++ ++++ S T
Sbjct: 590 NSIVVHIGESPQLGHYVTLCKHKSYGWLIYDDETV----QAVSDELVSRILNNEQRSATA 645
Query: 445 YILFYQSRDS 454
Y+LFY+ DS
Sbjct: 646 YLLFYEEVDS 655
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ Y QDAHEF NFLIN + + + D N G V
Sbjct: 421 FNTYCHQDAHEFFNFLINDLCDYL----------------DNSSLANEEIVG----NIVS 460
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDI--KQNTSITQCLRGFSSTETLCSDNKF 191
E F+GI+ +T+C C++++ ++E F D ++ + I + L + + E L + NKF
Sbjct: 461 ETFKGIIKYQTRCSMCDSITEREEQFLDFPIEFNGSEKVEIQELLGNYCAREILRASNKF 520
Query: 192 KCDNCASYQEAQ 203
C+ C YQEA+
Sbjct: 521 YCEICNEYQEAE 532
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCK--PFRDRVLEYKAKN 261
P IS L+ + D NE N + N+++++L K R ++ +
Sbjct: 317 SPTISDLKNDAISDTNEQNETKDSPPNNSLPSFQNNIVKSLEERKQIALRTGPVQVLQSD 376
Query: 262 KKN-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
K N TL SCL D+F ++ K G ++P FI L+++ F+ Y QDAHEF NFL
Sbjct: 377 KNNTNHTLFSCLRDIFIELSCSKSLTGLVSPTGFIDILKRDNVLFNTYCHQDAHEFFNFL 436
Query: 321 INHI 324
IN +
Sbjct: 437 INDL 440
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 9/53 (16%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL------EYKAKN---KKNKE 266
ER FG NFG TCY NS+LQAL+ FRD ++ E++ KN +KN E
Sbjct: 103 ERVFGFQNFGYTCYCNSILQALFNIGSFRDGIIGPASIGEFQLKNISMRKNTE 155
>gi|536106|emb|CAA84887.1| UBP13 [Saccharomyces cerevisiae]
Length = 688
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQ 450
Y+ F +
Sbjct: 661 YVCFIK 666
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKK 263
K+++
Sbjct: 173 KKSRE 177
>gi|410084186|ref|XP_003959670.1| hypothetical protein KAFR_0K01810 [Kazachstania africana CBS 2517]
gi|372466262|emb|CCF60535.1| hypothetical protein KAFR_0K01810 [Kazachstania africana CBS 2517]
Length = 714
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 85/129 (65%), Gaps = 7/129 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +KKLP LALHLKRFKY+++ N + K+ +++ +PL L + +D+++ + Y L
Sbjct: 496 ERIVGLKKLPHTLALHLKRFKYLEEKNANTKLFNKIEYPLILSVSSTFNDSIH--KKYEL 553
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+++V+H G GP+ GHY+SI KS F WLLFDD+ V+ I++ T+ F G D T
Sbjct: 554 ISIVVHLGGGPHHGHYVSICKSDKFGWLLFDDETVESINEETVLKFVGDPEDQT----TA 609
Query: 445 YILFYQSRD 453
Y+LFY+ D
Sbjct: 610 YVLFYREID 618
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 68/133 (51%), Gaps = 29/133 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F MQQDAHEFLNFL+N +N+ + +LS E ++
Sbjct: 390 FSTMMQQDAHEFLNFLLNELNDFL-----------QLS---------------NEKNFIL 423
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK---QNTSITQCLRGFSSTETLCSDNK 190
+ FQG LT++ KCL C+T++S +E F D +++K ++ +I L + E L NK
Sbjct: 424 DQFQGTLTNQIKCLTCDTLTSNNEPFLDFPIEVKNDDEDLNIQDILNKYHQREILNGTNK 483
Query: 191 FKCDNCASYQEAQ 203
F C+ C QEA+
Sbjct: 484 FYCNQCHGLQEAE 496
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K L CL D+F + ++ G I+P +F+ L+KE F MQQDAHEFLNFL+N +
Sbjct: 350 KPNLYLCLRDIFECVVENENLTGVISPYQFVRTLKKENILFSTMMQQDAHEFLNFLLNEL 409
Query: 325 NE 326
N+
Sbjct: 410 ND 411
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 192 KCDNCASYQEAQGPNISALEK--EIGPDRFPPN-----------ERYFGLVNFGNTCYSN 238
K D AS + PN A+E+ +I R P+ + FG NFGNTCY N
Sbjct: 75 KNDLAASITTSLPPNHQAIEEFLDIDIKRITPSISEVLPYGDGSNKIFGYENFGNTCYCN 134
Query: 239 SVLQALYFCKPFRDRVLEYKAK 260
S+LQ L+F FR +L++ K
Sbjct: 135 SILQCLFFLDDFRIDILKHPRK 156
>gi|124088720|ref|XP_001347209.1| Ubiquitin-specific protease [Paramecium tetraurelia strain d4-2]
gi|145474089|ref|XP_001423067.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057598|emb|CAH03582.1| Ubiquitin-specific protease, putative [Paramecium tetraurelia]
gi|124390127|emb|CAK55669.1| unnamed protein product [Paramecium tetraurelia]
Length = 326
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 210 LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
LEK +G D FP E G N N CYSN +LQALY+CK FR+ +L++ +N N+ LL
Sbjct: 12 LEKYLGQD-FPDGEILIGFENPSNICYSNVILQALYYCKDFRNYILQH--QNSINQNNLL 68
Query: 270 SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
LF +I+ HK++ G I+ KK + ++ + FD QD+HEF + IN +E
Sbjct: 69 DLTKLLFQSISNHKQRTGVISTKKMMNYIKTKNKIFDGKYHQDSHEFYMWFINECDE 125
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCG 393
LP +L +HLKRFKY ++ + +KVS ++ F +LR+ A + Y L ++IH G
Sbjct: 214 LPNVLVIHLKRFKYDERCGQMIKVSTKIPFSQQLRI-----KAQKQTKTYELTTIIIHLG 268
Query: 394 SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
G GHYI I K W FDDD + + +G + Q + Y+LFY ++
Sbjct: 269 QGILYGHYICITKIQGKWFKFDDDKISLFVDQDLHYVYGRSYPTQAQT-CAYMLFYNAQ 326
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 38/158 (24%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
FD QD+HEF + IN +E++ + Q+N W+
Sbjct: 104 FDGKYHQDSHEFYMWFINECDELL--KDKQNN-------------------------WIR 136
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IFQG ++T+CLNC T+S ++E + DL +D+ N S+ CL+ S E L N+F C
Sbjct: 137 QIFQGQQLTQTECLNCHTISQREEMYCDLSLDLFPNYSLNTCLQQMSKEEQLNGQNQFFC 196
Query: 194 DNCASYQEAQG-------PNISALEKEIGPDRFPPNER 224
D C S Q+A PN+ I RF +ER
Sbjct: 197 DKCQSKQDASKRLLLNTLPNVLV----IHLKRFKYDER 230
>gi|340504086|gb|EGR30572.1| ubiquitin-specific protease, putative [Ichthyophthirius
multifiliis]
Length = 250
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 13/134 (9%)
Query: 70 SSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP 129
S+ +F QD HEF +L+N IN++I + P +N + ++
Sbjct: 85 SNPDFRGDSHQDCHEFSIWLLNQINDII-------------NKPYIKTKENPNPLEQKQA 131
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+W+ +IF GILT++T+C NC+TV+ +DE F D+ +DI N+SI+ C++ S E L +
Sbjct: 132 SWLEDIFGGILTTQTQCNNCKTVTERDEAFLDISIDIDYNSSISHCIKKISEKEVLNQEC 191
Query: 190 KFKCDNCASYQEAQ 203
KF CD C + Q+A+
Sbjct: 192 KFFCDKCQTKQDAE 205
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLF 276
+ +P E++FGLVN N CYSNS+ QALY C+ FR+++L Y + K N+ ++ + ++F
Sbjct: 3 NNYPEGEKFFGLVNKDNICYSNSIFQALYNCELFRNQILNYNS--KPNEYNIIVIVQEIF 60
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
IA +KKK G K + +R +F QD HEF +L+N IN+
Sbjct: 61 QQIANNKKKTGICNTNKIMKYVRDSNPDFRGDSHQDCHEFSIWLLNQIND 110
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 332 KKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL 369
KKLP L LHLKRFKY +K NR K+ H++ FPL++++
Sbjct: 211 KKLPKTLILHLKRFKYDEKYNRMQKLMHKIAFPLDIKI 248
>gi|145544613|ref|XP_001457991.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425810|emb|CAK90594.1| unnamed protein product [Paramecium tetraurelia]
Length = 326
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 210 LEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
LEK +G D FP E G N N CYSN +LQALY+CK F++++L++++ N+ LL
Sbjct: 12 LEKYLGQD-FPDGEILIGFENPSNICYSNVILQALYYCKEFKNQILQHQS--SINQNNLL 68
Query: 270 SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
LF +I+ HK+K G I+ KK + ++ + FD QD+HEF + IN E
Sbjct: 69 DLTKLLFQSISKHKQKTGVISTKKMMNYIKTKNKIFDGKYHQDSHEFYMWFINECEE 125
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCG 393
LP +L +HLKRFKY ++ + +KVS ++ F +L S A+ + Y L ++IH G
Sbjct: 214 LPNVLVVHLKRFKYDERCGQMIKVSSKIPFSQQL-----SIKALKQTKTYELTTIIIHLG 268
Query: 394 SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
G GHY+ I K W FDDD + + +G S + Y+LFY ++
Sbjct: 269 QGILYGHYVCITKIQGKWFKFDDDKISLFVDQDLHFVYG-RSYPTHAQTCAYMLFYNAQ 326
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 94/222 (42%), Gaps = 54/222 (24%)
Query: 7 LEKEIGPDRFPPNERYFGLVNGKT-------------CKEKEDRIEKSQPFWEQTSLQDK 53
LEK +G D FP E G N CKE +++I + Q Q +L D
Sbjct: 12 LEKYLGQD-FPDGEILIGFENPSNICYSNVILQALYYCKEFKNQILQHQSSINQNNLLDL 70
Query: 54 ISLGWE-------------CSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSE 100
L ++ ++ + FD QD+HEF + IN E++ +
Sbjct: 71 TKLLFQSISKHKQKTGVISTKKMMNYIKTKNKIFDGKYHQDSHEFYMWFINECEELL--K 128
Query: 101 RPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFF 160
Q+N WV +IFQG ++ +CLNC ++S ++E +
Sbjct: 129 DKQNN-------------------------WVRQIFQGQQLTQIECLNCHSISQREEMYC 163
Query: 161 DLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
DL +D+ N S++ CL+ S E L N+F CD C S Q+A
Sbjct: 164 DLSLDLFPNYSLSTCLQQMSKEEQLNGQNQFFCDKCQSKQDA 205
>gi|255712471|ref|XP_002552518.1| KLTH0C06732p [Lachancea thermotolerans]
gi|238933897|emb|CAR22080.1| KLTH0C06732p [Lachancea thermotolerans CBS 6340]
Length = 714
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 87/130 (66%), Gaps = 7/130 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP LALH+KRFKY ++ N +VK+ +R+ +PL+L++ D +V + Y L
Sbjct: 517 ERVVGLKQLPFYLALHMKRFKYSEEQNCNVKLFNRIRYPLDLKVCSTFDASVC--KQYEL 574
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
V +V+H G GP+ GHY+S+ K+ F WLLFDD+ V+ +++ST+ F G + D T
Sbjct: 575 VGLVVHMGGGPHHGHYVSLCKNERFGWLLFDDETVETVNESTVLKFVGNSDDLT----TA 630
Query: 445 YILFYQSRDS 454
Y+LFY+ + +
Sbjct: 631 YLLFYREKTA 640
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 74/134 (55%), Gaps = 16/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGG--GDNHSSSGFEEPTW 131
F + M QDAHEFLNFL+N I++ I +++K+ + A + DNH + +
Sbjct: 396 FSSTMHQDAHEFLNFLLNDISDYI-----NAHSKNNIQAHETTNPMDDNHLN-------F 443
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDN 189
V +F+G LT+ TKCL C+ ++ ++E F D ++++ + T I L + E L N
Sbjct: 444 VDRLFKGTLTNRTKCLTCDNMTYRNEPFLDFAIEVQDDGETDIQTTLADYHQKELLNGAN 503
Query: 190 KFKCDNCASYQEAQ 203
KF CD C QEA+
Sbjct: 504 KFYCDECCGLQEAE 517
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K +L + L DL+ +I +K G ++P +F+ L++E F + M QDAHEFLNFL+N I
Sbjct: 356 KPSLYTALKDLYESITENKFLTGVVSPIQFVETLKRENILFSSTMHQDAHEFLNFLLNDI 415
Query: 325 NE 326
++
Sbjct: 416 SD 417
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ +Y R +LE+
Sbjct: 141 KVFGYENFGNTCYCNSVLQVIYNLPELRVNLLEF 174
>gi|261332189|emb|CBH15183.1| cysteine peptidase, Clan CA, family C19,putative [Trypanosoma
brucei gambiense DAL972]
Length = 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 216 PDRFPPNERYF--------GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK-- 265
P R P++ + GL N+GNTCY N+VLQ LY C P R R+LE A +K K
Sbjct: 139 PTRSSPSQTQYLEISGYPVGLENYGNTCYFNAVLQLLYHCSPLRMRMLELNAIYEKKKGS 198
Query: 266 -----ETLLSCLADLF---HNIATHKKKV-GSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
T+L+ ADLF H + +KK+ G+ P+ + R+R+ F+N Q DAHEF
Sbjct: 199 SRFDSSTILALTADLFAKMHKVNNNKKRQKGAPTPRGLLNRVRQLNSMFNNNHQHDAHEF 258
Query: 317 LNFLINHINE 326
FL+N + E
Sbjct: 259 AMFLLNELVE 268
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 114 DGGGGDN-HSSSGFE--EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT 170
DG GG + +S+SG++ P + +I G S T C CE VS E F D+ +++ Q +
Sbjct: 361 DGVGGTSLYSTSGWDWGAPPSLEKILTGQFVSLTGCCECENVSVTREAFIDIGLNVMQGS 420
Query: 171 SITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
S+ +C+ S TE +NK C+ C A+
Sbjct: 421 SLRRCVEELSVTEVFDGENKMNCERCGKKVAAR 453
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK--S 440
+ L V H GSG + GHY + V+ W FDD+ V ++ ++ F+G D + +
Sbjct: 590 FALSGFVAHRGSGLSSGHYFTCVRHESAWRCFDDNNVTELTDREMQRFWGTPVDLGEVVT 649
Query: 441 SETGYILFYQ 450
+ T Y+L Y+
Sbjct: 650 TTTAYLLLYE 659
>gi|302309573|ref|NP_987036.2| AGR370Wp [Ashbya gossypii ATCC 10895]
gi|299788422|gb|AAS54860.2| AGR370Wp [Ashbya gossypii ATCC 10895]
Length = 740
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP +L LHLKRFKY +K ++K+ + + +PL LR+ D AV D Y L
Sbjct: 537 ERTVGIKELPELLPLHLKRFKYSEKHQSNIKLFNVIHYPLNLRVCSTFDHAVCKD--YEL 594
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+VIH G GP GHY++I K F WLL+DD+ V+ + + + F G +D T
Sbjct: 595 NGIVIHMGGGPQHGHYVAICKHELFGWLLYDDETVESVGEDAVLRFIGDVNDMT----TA 650
Query: 445 YILFYQSRDSTD 456
Y+LFY+S+ D
Sbjct: 651 YVLFYKSKREDD 662
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 21/132 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F++ M QDAHEFLNFL+N +++ + + + KS P+ ++H
Sbjct: 425 FNSMMHQDAHEFLNFLMNALSDSLQLQLQRLPDKS----PE---------------NFIH 465
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
+FQG + + KCL C+ ++S +E FFD + + ++ ++ LR F E L NKF
Sbjct: 466 TLFQGTMNNSIKCLTCDNITSNEEPFFDFAIPVSEDEEVNVQDILRDFHQREMLNGANKF 525
Query: 192 KCDNCASYQEAQ 203
CD+C QEA+
Sbjct: 526 YCDSCNGLQEAE 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F IA +G ++P F++ LRKE F++ M QDAHEFLNFL+N +++
Sbjct: 387 TLYNALKDVFECIAESNHMLGVVSPSHFVSVLRKENVLFNSMMHQDAHEFLNFLMNALSD 446
Query: 327 KC-MKVKKLP 335
+++++LP
Sbjct: 447 SLQLQLQRLP 456
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FGL N+GNTCY NSVLQ LY K R VL+Y +
Sbjct: 97 KVFGLENYGNTCYCNSVLQCLYNLKELRVNVLKYPTR 133
>gi|374110287|gb|AEY99192.1| FAGR370Wp [Ashbya gossypii FDAG1]
Length = 740
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 79/132 (59%), Gaps = 7/132 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP +L LHLKRFKY +K ++K+ + + +PL LR+ D AV D Y L
Sbjct: 537 ERTVGIKELPELLPLHLKRFKYSEKHQSNIKLFNVIHYPLNLRVCSTFDHAVCKD--YEL 594
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+VIH G GP GHY++I K F WLL+DD+ V+ + + + F G +D T
Sbjct: 595 NGIVIHMGGGPQHGHYVAICKHELFGWLLYDDETVESVGEDAVLRFIGDVNDMT----TA 650
Query: 445 YILFYQSRDSTD 456
Y+LFY+S+ D
Sbjct: 651 YVLFYKSKREDD 662
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 21/132 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F++ M QDAHEFLNFL+N +++ + + + KS P+ ++H
Sbjct: 425 FNSMMHQDAHEFLNFLMNALSDSLQLQLQRLPDKS----PE---------------NFIH 465
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
+FQG + + KCL C+ ++S +E FFD + + ++ ++ LR F E L NKF
Sbjct: 466 TLFQGTMNNSIKCLTCDNITSNEEPFFDFAIPVSEDEEVNVQDILRDFHQREMLNGANKF 525
Query: 192 KCDNCASYQEAQ 203
CD+C QEA+
Sbjct: 526 YCDSCNGLQEAE 537
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F IA +G ++P F++ LRKE F++ M QDAHEFLNFL+N +++
Sbjct: 387 TLYNALKDVFECIAESNHMLGVVSPSHFVSVLRKENVLFNSMMHQDAHEFLNFLMNALSD 446
Query: 327 KC-MKVKKLP 335
+++++LP
Sbjct: 447 SLQLQLQRLP 456
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FGL N+GNTCY NSVLQ LY K R VL+Y +
Sbjct: 97 KVFGLENYGNTCYCNSVLQCLYNLKELRVNVLKYPTR 133
>gi|71746840|ref|XP_822475.1| ubiquitin carboxyl-terminal hydrolase [Trypanosoma brucei TREU927]
gi|70832143|gb|EAN77647.1| ubiquitin carboxyl-terminal hydrolase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 662
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 216 PDRFPPNERYF--------GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK-- 265
P R P++ + GL N+GNTCY N+VLQ LY C P R R+LE A +K K
Sbjct: 139 PTRSSPSQTQYLEISGYPVGLENYGNTCYFNAVLQLLYHCSPLRMRMLELNAIYEKKKGS 198
Query: 266 -----ETLLSCLADLF---HNIATHKKKV-GSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
T+L+ ADLF H + +KK+ G P+ + R+R+ F+N Q DAHEF
Sbjct: 199 SRFDSSTILALTADLFAKMHKVNNNKKRQKGVPTPRGLLNRVRQLNSMFNNNHQHDAHEF 258
Query: 317 LNFLINHINE 326
FL+N + E
Sbjct: 259 AMFLLNELVE 268
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 114 DGGGGDN-HSSSGFE--EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT 170
DG GG + +S+SG++ P + +I G S T C CE VS E F D+ +++ Q +
Sbjct: 361 DGVGGTSLYSTSGWDWGAPPSLEKILTGQFVSLTGCCECENVSVTREAFIDIGLNVVQGS 420
Query: 171 SITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
S+ +C+ S TE +NK C+ C A+
Sbjct: 421 SLRRCVEELSVTEVFDGENKMNCERCGKKVAAR 453
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK--S 440
+ L V H GSG + GHY + V+ W FDD+ V ++ ++ F+G D + +
Sbjct: 590 FALSGFVAHRGSGLSSGHYFTCVRHESAWRCFDDNNVTELTDREMQRFWGTPVDLGEVVT 649
Query: 441 SETGYILFYQ 450
+ T Y+L Y+
Sbjct: 650 TTTAYLLLYE 659
>gi|118373437|ref|XP_001019912.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89301679|gb|EAR99667.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 321
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 71/121 (58%), Gaps = 17/121 (14%)
Query: 343 KRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM----------YNLVAVVIHC 392
K+FKY D++NR +K+ RV FPL ++L + + V PD+ Y L +V+IH
Sbjct: 206 KKFKYDDRLNRMIKLFWRVAFPLGIKL---TPNYVPPDQQNKQDLHTEMNYQLNSVIIHH 262
Query: 393 GSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
G G + GHY +++K D W L+DD+ ++KI +S +++FG + Y+LFYQ +
Sbjct: 263 GQGLSIGHYTALIKKTDIWYLYDDEQINKIQESDYQEYFGSNN----IPSCAYMLFYQQK 318
Query: 453 D 453
+
Sbjct: 319 E 319
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
Query: 80 QDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGI 139
QD HEF + +N +N+V+ + +S +P+W+ EIF GI
Sbjct: 95 QDCHEFSIWFLNQMNDVLNKKYIKSKTNPNPPPK-------------NQPSWIEEIFGGI 141
Query: 140 LTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASY 199
LT++T CLNC+ ++ +DE F DL +D+ N+S+T C++ S E + D++F C+ C S
Sbjct: 142 LTTQTTCLNCQKITERDEPFLDLSLDMNMNSSLTNCVKKLSDIEKMSGDDQFFCNTCNSK 201
Query: 200 QEAQ 203
+A+
Sbjct: 202 HDAE 205
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 233 NTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPK 292
N CYSNS+ QA Y C+PF+ +VLEYK+ NKET +LF I KKK G + K
Sbjct: 27 NICYSNSIFQAFYNCEPFKKKVLEYKS----NKET------ELFQEIQFSKKKTGVCSSK 76
Query: 293 KFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
K + +RK +F QD HEF + +N +N+
Sbjct: 77 KIMKYVRKGNPDFKGENHQDCHEFSIWFLNQMND 110
>gi|71664911|ref|XP_819431.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70884732|gb|EAN97580.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 655
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKK------NKETLLSCLADLFHNI 279
GL N+GNTCY N+V+Q LY C P R R+LE Y+ K ++TLL+ + DLF +
Sbjct: 178 GLENYGNTCYCNAVIQLLYHCSPLRLRLLELYQIYAKGAGHTGFEEDTLLALVVDLFAKM 237
Query: 280 --ATHKKKV--GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
A ++K+ +IAPK I+ ++++ F+N +QQDAHEF FL++ + E
Sbjct: 238 HKANNQKRYRKDAIAPKALISSIKEQNAAFNNTLQQDAHEFTMFLLSKMIE 288
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
+ IF G S T C CE + E F DL +DI+Q +S+ +C+ F S E NK
Sbjct: 399 IQVIFGGQFASLTACFECERTKTTREVFLDLSLDIEQGSSLLRCVSNFGSPELFYGANKL 458
Query: 192 KCDNCASYQEAQ 203
C++C + AQ
Sbjct: 459 HCEHCKKHVVAQ 470
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 58/185 (31%)
Query: 324 INEKCMKVKKLP-MILALHLKRFKYMDKMNR------HVKV------------------- 357
+ +K ++V +LP L +HLKRF+Y +K + HV V
Sbjct: 468 VAQKLLRVHRLPEYALLVHLKRFEYNEKTGKLTKRSDHVAVPNEIDVVEYEPWDDSNGAS 527
Query: 358 --------SHRVVFP------LELRLFHLSDDAVNPDR-----------------MYNLV 386
SH P +E R +D + R + L
Sbjct: 528 KTGVSECDSHAPCPPGSPSVAVEARTVAEGEDEASAPRPSVHLMNKLDGVVHRKGRFALS 587
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-SSETGY 445
V H G GP+ GHY + V+ W LF+D V ++ + ++ F+G+ + T Y
Sbjct: 588 GFVTHLGEGPDVGHYFTCVRHGGRWCLFNDATVTELTEYEVQKFWGVPIPVSGVVTATAY 647
Query: 446 ILFYQ 450
IL Y+
Sbjct: 648 ILLYE 652
>gi|403221693|dbj|BAM39825.1| ubiquitin carboxyl-terminal hydrolase [Theileria orientalis strain
Shintoku]
Length = 382
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 84/157 (53%), Gaps = 23/157 (14%)
Query: 70 SSDEFDNYMQQDAHEFLNFLIN-HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE 128
++D+F QQDAHEFL +L+N I+E+ E ++ KSK S HS S +E
Sbjct: 129 TNDDFVLGDQQDAHEFLTYLLNVMIDEI--REAEENVTKSKTST--------HSKSRHKE 178
Query: 129 P----TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTET 184
TW++E+ +G + SETKC C++V+ E F L +DI +N++I +CL + E
Sbjct: 179 KKEKRTWLNELVEGSVESETKCHECDSVTRMKEPFITLSLDIFENSNIKKCLDQYCDKEV 238
Query: 185 LCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
L NKF C+ C Y +A K+I D PP
Sbjct: 239 LSGKNKFFCETCNKYCDAS--------KKILFDVLPP 267
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 319 FLINHINEKCMKVKK-----LPMILALHLKRFKYMDK-----MNRHVKVSHRVVFPLELR 368
F N+ C KK LP IL LHLKRFKY K N + ++ ++V+ E+
Sbjct: 245 FFCETCNKYCDASKKILFDVLPPILILHLKRFKYNIKPGSTMCNMYERLQYQVISSNEIE 304
Query: 369 LFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIE 428
L + Y L +V++H G+ P+ GHYI+I + W DD + K+ +E
Sbjct: 305 L---ECNRKKRKVEYQLFSVILHIGTSPDYGHYINISELGGKWYRCDDVNILKLTDHHLE 361
Query: 429 DFFGLTSDHQKSSETGYILFYQSRD 453
+ + S+ YILFY+ ++
Sbjct: 362 ----IGDETTSGSDASYILFYRVKE 382
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHK 283
++ GL N N CY N V+Q+LY FRDR++E+ KK + S L L+ +
Sbjct: 59 KFCGLENKFNNCYCNVVIQSLYSYPEFRDRMMEF----KKTGIGISSELGKLYSKCVSQP 114
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ K F+ ++ D+F QQDAHEFL +L+N
Sbjct: 115 DYQST---KSFLRKICNTNDDFVLGDQQDAHEFLTYLLN 150
>gi|407844800|gb|EKG02140.1| ubiquitin hydrolase, putative,cysteine peptidase, Clan CA, family
C19, putative [Trypanosoma cruzi]
Length = 648
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 11/111 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKK------NKETLLSCLADLFHNI 279
GL N+GNTCY N+V+Q LY C P R R+LE Y+ K ++TLL+ + DLF +
Sbjct: 178 GLENYGNTCYCNAVIQLLYHCSPLRLRLLELYQIYAKGAGHTGFEEDTLLALVVDLFAKM 237
Query: 280 --ATHKKKV--GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
A ++K+ +IAPK I+ ++++ F+N +QQDAHEF FL++ + E
Sbjct: 238 HKANNQKRYRKDAIAPKALISSIKEQNAAFNNTLQQDAHEFTMFLLSKMIE 288
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
+ IF G S T C CE + E F DL +DI+Q +S+ +C+ F S E NK
Sbjct: 399 IQVIFGGQFASLTACFECERTKTTREVFLDLSLDIEQGSSLLRCVSNFGSPELFYGANKL 458
Query: 192 KCDNCASYQEAQ 203
C++C + AQ
Sbjct: 459 HCEHCKKHVVAQ 470
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 51/178 (28%)
Query: 324 INEKCMKVKKLP-MILALHLKRFKYMDKMNRHVKVSHRVVFPLEL--------------- 367
+ +K ++V +LP L +HLKRF+Y +K + K S V P E+
Sbjct: 468 VAQKLLRVHRLPEYALLVHLKRFEYNEKTGKLTKRSDHVAVPNEIDVVEYEPWDDSNDAS 527
Query: 368 ----------------------------------RLFHLSDDAVNPDRMYNLVAVVIHCG 393
L + D V+ + L V H G
Sbjct: 528 KTGVSECDSHAPCPPGSPSVAEDEDAASAPRPSVHLMNKLDGVVHRKGRFALSGFVTHLG 587
Query: 394 SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-SSETGYILFYQ 450
GP+ GHY + V+ W LF+D V ++ + ++ F+G+ + T YIL Y+
Sbjct: 588 DGPDVGHYFTCVRHGGRWCLFNDATVTELTEYEVQKFWGVPIPVSGVVTATAYILLYE 645
>gi|50290115|ref|XP_447489.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526799|emb|CAG60426.1| unnamed protein product [Candida glabrata]
Length = 724
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 32/154 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F++ MQQDAHEFLNFL+N+I++ G N+ S EE
Sbjct: 411 FNSTMQQDAHEFLNFLLNNISDFA-----------------GKYKSNYLKSSNEEECEIS 453
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSIT--QCLRGFSSTETLC 186
+V + F+G+L + KCL C+ VS+ +E F D ++I+ + +I R F E LC
Sbjct: 454 HDFVKDQFEGVLLNRIKCLTCDCVSANEEPFLDFPIEIQNDEAINIQDTFRSFYQREILC 513
Query: 187 SDNKFKCDNCASYQEAQGPNISALEKEIGPDRFP 220
NKF C+ C QEA EK +G ++ P
Sbjct: 514 GPNKFYCNECCGLQEA--------EKTVGFEKLP 539
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 71/128 (55%), Gaps = 9/128 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK + +KLP LALHLKRFK +N K+ +++ +PL L + D+++ + Y L
Sbjct: 530 EKTVGFEKLPKTLALHLKRFKCDGIVNS--KLFNKIEYPLTLTVCSCFDNSLC--KTYEL 585
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VV+H G+ P GHY+SI K + WL++DD+ ++ I + + G + T
Sbjct: 586 TGVVLHVGASPTHGHYVSICKHEKYGWLMYDDETIESIPEEAVTSHVG----EPNNPITA 641
Query: 445 YILFYQSR 452
Y+LFY +
Sbjct: 642 YVLFYSEK 649
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 268 LLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
L L D+ I ++ G ++P +F+ L+++ F++ MQQDAHEFLNFL+N+I++
Sbjct: 374 LYYALKDIMECITENRYLSGVVSPAEFVKLLKRQNPLFNSTMQQDAHEFLNFLLNNISDF 433
Query: 328 CMKVK 332
K K
Sbjct: 434 AGKYK 438
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK 260
+ FG NFG+TCY NSVLQ +Y FR +L++ +
Sbjct: 119 KVFGYENFGHTCYCNSVLQCIYNLPEFRKSILQFPQR 155
>gi|207345900|gb|EDZ72570.1| YER098Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 579
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL FL+ I + ++S+ + D + +G W+ IF G
Sbjct: 219 QEDAHEFLRFLLESIARSCSRRGERRLPSQQVSSDELVASDCNHGTG-----WITRIFGG 273
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
+L S C C+ S + E F DL +D +Q+ SI++CL F++TE L N++ C C
Sbjct: 274 LLRSRVICRTCQHKSYRTERFLDLSLDFRQSASISKCLEHFAATELLAGRNRYDCAACHG 333
Query: 199 YQEA-------QGPNISALEKEIGPDRFPPNERYFGLVNF 231
Y +A Q P + L + RF + G+V F
Sbjct: 334 YSDAEKQIRIRQAPVVLTLHLK----RFHALRKLSGVVRF 369
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 18/131 (13%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK +++++ P++L LHLKRF + K++ V+ S L+LR + ++++ V MY L
Sbjct: 338 EKQIRIRQAPVVLTLHLKRFHALRKLSGVVRFSEW----LDLRPY-MAEEFVAGPVMYRL 392
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AV++H G + GHY + V+S WL DD+ + ++ I F ++
Sbjct: 393 FAVIVHEGHSLSSGHYYAFVRSASGAWLRCDDEHLSRVG---IGSVF---------AQQA 440
Query: 445 YILFYQSRDST 455
Y+LFY D+
Sbjct: 441 YLLFYLRVDAV 451
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Query: 206 NISALEKEIG-PDRFPPNE--RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+ISAL G P + P + R FGL N GNTCY+N+V+QAL P + L +
Sbjct: 108 DISALAPVKGLPLEWLPQQSLRSFGLRNLGNTCYANAVIQALLHTPPLVLKALSDGCASA 167
Query: 263 KNKETLLSCLADLF----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
+A + ++AP + I L + Q+DAHEFL
Sbjct: 168 TPHTGFFDAMAAFVRLCRQLLVVRPSGTNAVAPTEIIRNLPAICRRYRVGRQEDAHEFLR 227
Query: 319 FLINHINEKCMKV--KKLP 335
FL+ I C + ++LP
Sbjct: 228 FLLESIARSCSRRGERRLP 246
>gi|146085759|ref|XP_001465351.1| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
gi|134069449|emb|CAM67772.1| putative cysteine peptidase, Clan CA, family C19 [Leishmania
infantum JPCM5]
Length = 721
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-------KAKNKKNKETLLSCLADLF-- 276
GL N+GNTCY NSV+Q +Y C P R R+LE K K+ ++T+L L L
Sbjct: 260 LGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKGKSGFEEDTVLFQLCSLIAV 319
Query: 277 ----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+N K IAPK+ + +R + + F+N MQQDAHEF FL+N I + ++
Sbjct: 320 MHKSNNRTKDKYPREKIAPKELLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWDTEQRIM 379
Query: 333 KLPMILALHLKRFKYMDK 350
P + L LK M K
Sbjct: 380 ADPANVNLFLKHETSMKK 397
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 47/170 (27%)
Query: 74 FDNYMQQDAHEFLNFLINHI---NEVILSE------------------------------ 100
F+N MQQDAHEF FL+N I + I+++
Sbjct: 352 FNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKHETSMKKKGSLSFSWKHSKDK 411
Query: 101 -------------RPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKC 146
+ S A + A GG + F E T + I QG S T C
Sbjct: 412 HISSHSHKENRLDKTTSAAATNSDAGANGGKAVDAQQPFSGELTPLQVILQGQFGSLTAC 471
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L CE V++++E F DL ++ Q TS+ +CL F E NK +C+ C
Sbjct: 472 LECENVTAREEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEEC 521
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-S 440
+ L V H G GPN GHY + V+ W FDD+ V + + ++ +FG+ SD
Sbjct: 649 FELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVV 708
Query: 441 SETGYILFYQ 450
+ T YIL Y+
Sbjct: 709 TTTAYILLYE 718
>gi|398014746|ref|XP_003860563.1| ubiquitin hydrolase, putative [Leishmania donovani]
gi|322498785|emb|CBZ33857.1| ubiquitin hydrolase, putative [Leishmania donovani]
Length = 721
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-------KAKNKKNKETLLSCLADLF-- 276
GL N+GNTCY NSV+Q +Y C P R R+LE K K+ ++T+L L L
Sbjct: 260 LGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKGKSGFEEDTVLFQLCSLIAV 319
Query: 277 ----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+N K IAPK+ + +R + + F+N MQQDAHEF FL+N I + ++
Sbjct: 320 MHKSNNRTKDKYPREKIAPKELLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWDTEQRIM 379
Query: 333 KLPMILALHLKRFKYMDK 350
P + L LK M K
Sbjct: 380 ADPANVNLFLKHETSMKK 397
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 47/170 (27%)
Query: 74 FDNYMQQDAHEFLNFLINHI---NEVILSE------------------------------ 100
F+N MQQDAHEF FL+N I + I+++
Sbjct: 352 FNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKHETSMKKKGSLSFSWKHSKDK 411
Query: 101 -------------RPQSNAKSKLSAPDGGGGDNHSSSGFE-EPTWVHEIFQGILTSETKC 146
+ S A + A GG + F E T + I QG S T C
Sbjct: 412 HISSHSHKENKLDKTTSAAATNSDAGANGGKAVDAQQPFSGELTPLQVILQGQFGSLTAC 471
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L CE V++++E F DL ++ Q TS+ +CL F E NK +C+ C
Sbjct: 472 LECENVTAREEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEEC 521
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-S 440
+ L V H G GPN GHY + V+ W FDD+ V + + ++ +FG+ SD
Sbjct: 649 FELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVV 708
Query: 441 SETGYILFYQ 450
+ T YIL Y+
Sbjct: 709 TTTAYILLYE 718
>gi|50309717|ref|XP_454871.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644006|emb|CAG99958.1| KLLA0E20351p [Kluyveromyces lactis]
Length = 697
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 79/126 (62%), Gaps = 7/126 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K LP LA+HLKRFKY + N + K+ +R+ +PL+LR+ D AV D Y L
Sbjct: 509 ERTVGLKSLPKTLAIHLKRFKYSEARNCNAKLFNRIHYPLDLRVCSSFDSAVCKD--YEL 566
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+VIH G GP+ GHY++I K+ F WLLFDD+ V+ I++ T+ F G ++ T
Sbjct: 567 NGIVIHMGGGPHHGHYVAICKNDLFGWLLFDDETVESINEETVLKFIGDANELT----TA 622
Query: 445 YILFYQ 450
Y+L Y+
Sbjct: 623 YVLIYK 628
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 19/132 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + M QDAHEFLN+L+N +++ + +R KL + +PT++
Sbjct: 395 FSSSMHQDAHEFLNYLLNELSDTL--KRDMELDTDKLES---------------KPTFIE 437
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--TSITQCLRGFSSTETLCSDNKF 191
++F+G L + TKC C+T++++DE F D ++I+++ I L + E L NKF
Sbjct: 438 DLFKGSLCNSTKCFTCDTITARDEPFLDFPIEIQEDEEIKIQDILNNYKHRELLTGANKF 497
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 498 YCDKCCGLQEAE 509
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
K K TL S L D+F IA ++ +G ++P F+ L++E F + M QDAHEFLN+L+
Sbjct: 352 KGTKPTLYSGLKDIFECIAENESAIGVVSPSNFVNILKQENILFSSSMHQDAHEFLNYLL 411
Query: 322 NHINE 326
N +++
Sbjct: 412 NELSD 416
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
+ FG NFGNTCY NSVLQ LY FR +L+Y +++
Sbjct: 113 KVFGYENFGNTCYCNSVLQCLYNLTEFRTEILKYPSRD 150
>gi|452820522|gb|EME27563.1| ubiquitin carboxyl-terminal hydrolase 35/38 [Galdieria sulphuraria]
Length = 394
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 8/133 (6%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++E N+ QQDAHEFL FL+ I + S++ +S L+ D ++ SSSG +
Sbjct: 129 ANELFNFQQQDAHEFLRFLLGSIQNLFASKK-----ESSLTLKDI---NSVSSSGQQPKD 180
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+ +F G++ ++T+CL CE + +E F D+ + + SI+ + E L +NK
Sbjct: 181 LIEALFGGLVVTKTRCLECENETRHEETFMDISLPVHGRRSISWAISDCCRREVLMGNNK 240
Query: 191 FKCDNCASYQEAQ 203
+ CDNC +Y EA+
Sbjct: 241 YACDNCLTYTEAE 253
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVL---EYKAKNKKNKET--------LLSCLAD 274
GL N GNTC+ ++V+Q L+ K FR +L +K ++ N + + L +
Sbjct: 39 LGLANLGNTCFMSAVIQVLFHLKDFRKLILVEENWKVSSRTNNYSYSIEQDLAIAKSLRN 98
Query: 275 LFHNIATHKKK---VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+F + T ++ I+P L+K +E N+ QQDAHEFL FL+ I
Sbjct: 99 VFLQLETGRESNENQTYISPISLHACLKKHANELFNFQQQDAHEFLRFLLGSI 151
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 56/146 (38%), Gaps = 30/146 (20%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAV-NPDRMYN 384
EK +LP +L HLK F + KV+ PLEL++ D V N Y
Sbjct: 253 EKYWSFVELPPLLIFHLKLFSENTR-----KVNQVTPCPLELKMTRWCDSKVQNGYDTYR 307
Query: 385 LVAVVIHCGSGPNRGHYISIV--------------------KSHDF-WLLFDDDVVDKID 423
L A+++H G G GHY + V SH F W +D I
Sbjct: 308 LSAIIVHQGFGLGEGHYYAFVSCYLTDYVHCFKHEITEDNPSSHCFPWYCLNDTETFIIS 367
Query: 424 QSTIEDFFGLTSDHQKSSETGYILFY 449
+S D + ET Y+LFY
Sbjct: 368 ES---DLMQRLFECPTCVETPYLLFY 390
>gi|297825113|ref|XP_002880439.1| hypothetical protein ARALYDRAFT_481095 [Arabidopsis lyrata subsp.
lyrata]
gi|297326278|gb|EFH56698.1| hypothetical protein ARALYDRAFT_481095 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 30/126 (23%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKY+ ++ R+ K+S+RVVFPLEL+L + D+ V+ + Y+L
Sbjct: 193 QKRMKIKKPPHILVIHLKRFKYIQQLGRYKKLSYRVVFPLELKLSNTVDEYVDIE--YSL 250
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV V+ I++S ++ FFG + ++ +++ GY
Sbjct: 251 FAVV----------------------------TVEMIEESAVQTFFGSSQEYSSNTDHGY 282
Query: 446 ILFYQS 451
IL Y+S
Sbjct: 283 ILLYES 288
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 19/83 (22%)
Query: 212 KEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALY-----------------FCKPFRDRV 254
K +G D+FP ERY G NFGNTCY NSVLQ L F R+ +
Sbjct: 1 KALG-DQFPEGERYLGFENFGNTCYCNSVLQRLLLVLEGLTCTEEPCASSVFKIWIRELL 59
Query: 255 LEYKAKNKKN-KETLLSCLADLF 276
L++ A ++ + +E LL+CLADLF
Sbjct: 60 LQHYANDQADAQENLLTCLADLF 82
>gi|323309418|gb|EGA62635.1| Ubp9p [Saccharomyces cerevisiae FostersO]
Length = 633
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 77/149 (51%), Gaps = 23/149 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ +QQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMVQQDAHEFLNFLLNDFSEYIQRNNPRVRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQGPNISALEKEIGPDRFP 220
C+ C QEA E+ +G + P
Sbjct: 535 YCNKCYGLQEA--------ERMVGLKQLP 555
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLF 414
VVIH GSGP GHY+ I ++ W+ F
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKVWVAF 632
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ +KE F+ +QQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKIXKKENVLFNTMVQQDAHEFLNFLLNDFSE 449
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>gi|123454969|ref|XP_001315233.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121897903|gb|EAY03010.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 883
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHC 392
KLP +LALHL RFK+ + ++V R P + L DD N + YNL AVV HC
Sbjct: 294 KLPPVLALHLCRFKFSRTEGKVIEVKTRFDCPNTINLKEFVDDFYNDETEYNLFAVVAHC 353
Query: 393 GSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS--------SETG 444
G+ P GHYIS +K W+ FDD V ++D + ++ FG D S +
Sbjct: 354 GN-PESGHYISYIKLCGKWMKFDDITVTQVDFAEVQQTFGNRDDQNSSFTFLFNYGAPVA 412
Query: 445 YILFYQSRD 453
Y++FY D
Sbjct: 413 YLVFYVRND 421
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 121 HSSSG-FEEPTWVH--EIFQGILTSETKCLN---CETVSSKDEDFFDLQVDIKQNTSITQ 174
H+ G + P ++ E F +L T+ L C + ++FFD+++ I +
Sbjct: 26 HTKEGLYMSPVFIQDKEAFVCLLYPPTETLIIYCCSALQWSFDEFFDIKIKIHLDKKKIN 85
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNT 234
F+ C K+ + Q P +E ER+ G+ N G T
Sbjct: 86 TRSTFTKRNPFCLI-KYDASPSKISIKIQMPPFYPYTRE---------ERFVGIRNSGAT 135
Query: 235 CYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKF 294
CY +VLQ LY FR + + K L S + LF + K P
Sbjct: 136 CYMAAVLQILYNLGAFRQLIYSFNQPPK-----LTSAIQQLFVELQLSSK------PPTV 184
Query: 295 ITRLRKEKDEFD-NYMQQDAHEFLNFLINHI 324
LR + + +QQD HEFL L++++
Sbjct: 185 DKLLRALGNAAEIARIQQDTHEFLLALLDNL 215
>gi|84995756|ref|XP_952600.1| ubiquitin carboxyl-terminal hydrolase [Theileria annulata strain
Ankara]
gi|65302761|emb|CAI74868.1| ubiquitin carboxyl-terminal hydrolase, putative [Theileria
annulata]
Length = 382
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 16/156 (10%)
Query: 68 LCSS-DEFDNYMQQDAHEFLNFLIN-HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
+CS+ D+F QQDAHEFL +++N I+E+ E K+ +S+ GG
Sbjct: 126 VCSTKDDFILGDQQDAHEFLTYILNAMIDEIRNIEDEYVKPKTFMSSKSGG------KRK 179
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETL 185
E+ TW++E+ +G + SET+C C++V+ E F L ++I N I CL+ + E L
Sbjct: 180 LEKRTWLNELVEGCVKSETRCHECDSVTGMTEPFITLSLNIFDNCDINLCLQRYCDDELL 239
Query: 186 CSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
N+F C+ C Y +A K I D PP
Sbjct: 240 SGKNQFFCEKCDKYCDAS--------KRIVFDLMPP 267
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 7/101 (6%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHK 283
++ GL N N CYSN V+Q+LY FR+R++ K KK+ ++ S LA L+ +
Sbjct: 59 KFNGLENNLNNCYSNVVIQSLYSYHEFRNRMI----KMKKSGGSISSELAKLYSKCVSQS 114
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ K F+ ++ KD+F QQDAHEFL +++N +
Sbjct: 115 DIQ---STKGFLKKVCSTKDDFILGDQQDAHEFLTYILNAM 152
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 334 LPMILALHLKRFKYMDKMNRHV-KVSHRVVFPLELRLFHLSDDAVNPDR-----MYNLVA 387
+P +L LHLKRFKY K + V R+ + + + VN R +Y L +
Sbjct: 265 MPPLLILHLKRFKYTTKPGSSLCSVYERLPYSVVCS----NVIQVNCKRHPCPIVYELFS 320
Query: 388 VVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS-SETGYI 446
++ H G+ P+ GHYI+I + W DD + K+D D+ D S ++ YI
Sbjct: 321 IISHIGTSPDYGHYINISELGGSWFRCDDASILKLD-----DYHSEIGDETTSGNDASYI 375
Query: 447 LFYQSRD 453
LFY+ ++
Sbjct: 376 LFYRIKE 382
>gi|157868842|ref|XP_001682973.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
gi|68223856|emb|CAJ03957.1| putative ubiquitin hydrolase [Leishmania major strain Friedlin]
Length = 665
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 13/131 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-------KAKNKKNKETLLSCLADLF-- 276
GL N+GNTCY NSV+Q +Y C P R R+LE K K ++T+L L L
Sbjct: 204 LGLENYGNTCYCNSVIQLIYHCAPLRLRLLELYHVYLTKKGKPGFEEDTVLFQLCSLIAV 263
Query: 277 ----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+N K IAPK + +R + ++F+N MQQDAHEF FL+N I + ++
Sbjct: 264 MHKSNNRTKDKYPREKIAPKDLLNCVRAKNEDFNNDMQQDAHEFTMFLLNDIWDTEQRIM 323
Query: 333 KLPMILALHLK 343
P + L LK
Sbjct: 324 ADPANVNLFLK 334
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 71/172 (41%), Gaps = 47/172 (27%)
Query: 72 DEFDNYMQQDAHEFLNFLINHI---NEVILSERPQSNA---------------------- 106
++F+N MQQDAHEF FL+N I + I+++ N
Sbjct: 294 EDFNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKYEASLKKKGSLSFSWKHSK 353
Query: 107 ---------------KSKLSAP-------DGGGGDNHSSSGFEEPTWVHEIFQGILTSET 144
K+ L+A +GG + E T + I QG S T
Sbjct: 354 DKHISSHSHKENRLDKTTLAAATNSDVGTNGGKAVDAQQPFSGELTPLQVILQGQFGSLT 413
Query: 145 KCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
CL CE V++++E F DL ++ Q TS+ +CL F E NK +C+ C
Sbjct: 414 ACLECENVTAREEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGKNKLRCEEC 465
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-S 440
+ L V H G GPN GHY + V+ W FDD+ V + + ++ +FG+ SD
Sbjct: 593 FELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVV 652
Query: 441 SETGYILFYQ 450
+ T YIL Y+
Sbjct: 653 TTTAYILLYE 662
>gi|71030076|ref|XP_764680.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351636|gb|EAN32397.1| hypothetical protein TP02_0111 [Theileria parva]
Length = 258
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 72/144 (50%), Gaps = 15/144 (10%)
Query: 79 QQDAHEFLNFLIN-HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
QQDAHEFL +++N I+E+ E K+ +S+ GG E+ TW++E+ +
Sbjct: 14 QQDAHEFLTYILNAMIDEIRNLEDEYVKPKTFMSSKSGG------KRKLEKKTWLNELVE 67
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
G + SET+C C +V+ E F L ++I N I CL+ + E L N+F C+ C
Sbjct: 68 GCVKSETRCHECYSVTGMTEPFITLSLNIFDNCDINLCLQRYCDDELLSGKNQFFCEKCD 127
Query: 198 SYQEAQGPNISALEKEIGPDRFPP 221
Y +A K I D PP
Sbjct: 128 KYCDAS--------KRIVFDLMPP 143
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
Query: 334 LPMILALHLKRFKYMDKMNRHV-KVSHRVVFPLELRLFHLSDDAVNPDR-----MYNLVA 387
+P +L LHLKRFKY K + V R+ + + + VN R +Y L +
Sbjct: 141 MPPLLILHLKRFKYTTKPGSSLCSVYERLPYSVVCS----NVIQVNCKRHPCPIVYELFS 196
Query: 388 VVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS-SETGYI 446
++ H G+ P+ GHYI+I + W DD + K+D D+ D S ++ YI
Sbjct: 197 IISHIGTSPDYGHYINISELGGNWFRCDDASILKLD-----DYHSEIGDETTSGNDASYI 251
Query: 447 LFYQSRD 453
LFY+ ++
Sbjct: 252 LFYRIKE 258
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 299 QEDAHEFMRFAIDKMQSACLDEF---------------GGEKAVDPSTQETTLIQHIFGG 343
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK+KCD C+
Sbjct: 344 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCS 403
Query: 198 SYQEAQ 203
Y +AQ
Sbjct: 404 DYVKAQ 409
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + K C L +L +I +
Sbjct: 215 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASES 274
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ APK ++ L Q+DAHEF+ F I+ + C+
Sbjct: 275 MHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 318
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 289 QEDAHEFMRFAIDKMQSACLDEF---------------GGEKAVDPSTQETTLIQHIFGG 333
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK+KCD C+
Sbjct: 334 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCS 393
Query: 198 SYQEAQ 203
Y +AQ
Sbjct: 394 DYVKAQ 399
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + K C L +L +I +
Sbjct: 205 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASES 264
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ APK ++ L Q+DAHEF+ F I+ + C+
Sbjct: 265 MHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 308
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 25/187 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL ++I+ + L + K + + GG SS T V EIF G
Sbjct: 115 QEDAHEFLRYVIDACHNTCLRLK-----KLRRNGSYNGGATTGSS------TVVKEIFGG 163
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ KCL+C S+K ++ D+ +D+ ++S+ + L+ F E L NK+KCDNC
Sbjct: 164 ALQSQVKCLSCGNDSNKVDEIMDISLDVLHSSSLKEALQKFFQLEILDGSNKYKCDNCKK 223
Query: 199 YQEA-------QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFR 251
A Q PNI ++ + RF E FG Y S+ + + CK +
Sbjct: 224 LVVARKQMSILQAPNILVIQLK----RF---EGIFGGKIDKAIAYEESLQLSNFMCKGSQ 276
Query: 252 DRVLEYK 258
D EYK
Sbjct: 277 DSRPEYK 283
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 57/132 (43%), Gaps = 31/132 (23%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNI 279
PP GL N GNTCY NSVLQ L + P + L + S L D +
Sbjct: 22 PP----LGLKNLGNTCYLNSVLQCLTYTPPLANFCLRNQH----------SSLCDFASSD 67
Query: 280 ATHKKKVGSIAPKKFITR-----------------LRKEKDEFDNYMQQDAHEFLNFLIN 322
A K++ ++ I R LR + F Q+DAHEFL ++I+
Sbjct: 68 ADRKRECPFCILERRIVRSLSLDLTLDSPLNVQSCLRIFAEHFRLGRQEDAHEFLRYVID 127
Query: 323 HINEKCMKVKKL 334
+ C+++KKL
Sbjct: 128 ACHNTCLRLKKL 139
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 215 QEDAHEFMRFAIDKMQSACLDEF---------------GGEKAVDPSTQETTLIQHIFGG 259
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK+KCD C+
Sbjct: 260 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCS 319
Query: 198 SYQEAQ 203
Y +AQ
Sbjct: 320 DYVKAQ 325
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + K C L +L +I +
Sbjct: 131 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASES 190
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ APK ++ L Q+DAHEF+ F I+ + C+
Sbjct: 191 MHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 234
>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1116
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL I+ + V L E G N S S E+ T +
Sbjct: 661 QLGNGKEEDAHEFLRHAIDTMQSVCLME----------------AGINASGSSEEDTTLM 704
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKF 191
+ F G L S+ KC+ C S + E DL V+I+ S + + LR F+STETL +NK+
Sbjct: 705 GQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDGENKY 764
Query: 192 KCDNCASYQEA-------QGPNI 207
C C SYQ+A + PNI
Sbjct: 765 HCVRCKSYQKAKKKLTVSEAPNI 787
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R FGL+N GN+CY+N+VLQ L F P +++ +K+ NK C + I
Sbjct: 582 RPFGLINIGNSCYANAVLQCLAFTPPLSAYLVQGLHSKSCSNKTWCFICEFERL--IFKS 639
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
K ++P +++L+ + N ++DAHEFL I+ + C+
Sbjct: 640 KDTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCL 686
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 164 QEDAHEFMRFAIDKMQSACLDEF---------------GGEKAVDPSTQETTLIQHIFGG 208
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK+KCD C+
Sbjct: 209 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWLDGDNKYKCDGCS 268
Query: 198 SYQEAQ 203
Y +AQ
Sbjct: 269 DYVKAQ 274
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + K C L +L +I +
Sbjct: 80 GLLNCGNSCFANVVLQCLSCTRPLAAYLLGMDHSRECYKRHEDWCFLCELQCHIQRASES 139
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ APK ++ L Q+DAHEF+ F I+ + C+
Sbjct: 140 MHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 183
>gi|444724306|gb|ELW64916.1| Ubiquitin carboxyl-terminal hydrolase 42 [Tupaia chinensis]
Length = 1157
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 110/250 (44%), Gaps = 53/250 (21%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM----KVKKL 334
I P I +R+ F Q+DAHEFL + ++ + + C+ K KK+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKCKKM 223
Query: 335 -PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPD 380
P +L L LKRF K++ V +P L++R + +S P
Sbjct: 224 VPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-MSQPNGEPI 278
Query: 381 RMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
+Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 279 -IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV------------ 325
Query: 440 SSETGYILFY 449
S+ Y+LFY
Sbjct: 326 LSQQAYVLFY 335
>gi|351696095|gb|EHA99013.1| Ubiquitin carboxyl-terminal hydrolase 24 [Heterocephalus glaber]
Length = 2400
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 122/302 (40%), Gaps = 65/302 (21%)
Query: 209 ALEKEIGPDRFPP-----NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
AL KE D PP + + GL N G TCY N+V Q LY + +L
Sbjct: 1542 ALTKEF--DYLPPVDSRSSSGFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDN 1599
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
+++ + LF ++ + K+ P+ F + E QQDA+EF LI+
Sbjct: 1600 PDDSVFYQVQSLFGHLM--ESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQ 1657
Query: 324 INEKCMKV-------KKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSD 374
++E ++ K LP +L +HL RF + + R +K ++ FP L + + +S
Sbjct: 1658 MDEYLKRITVKRTCIKSLPTVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSG 1717
Query: 375 DA--------------------------VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-- 406
A V Y LV V++H G + GHY S +K
Sbjct: 1718 MARQDSSSEVGENGRSMDQGGGGSPRKKVALTENYELVGVIVHSGQA-HAGHYYSFIKDR 1776
Query: 407 ---SHDFWLLFDDDVVDKID--QSTIE-DFFG------------LTSDHQKSSETGYILF 448
W F+D V+++ D T+E + FG +D ++ Y+LF
Sbjct: 1777 RGCGKGKWYKFNDTVIEEFDLNDETLEYECFGGEYRPKVYDQTNPYTDVRRRYWNAYMLF 1836
Query: 449 YQ 450
YQ
Sbjct: 1837 YQ 1838
>gi|357117231|ref|XP_003560376.1| PREDICTED: uncharacterized protein LOC100846465 [Brachypodium
distachyon]
Length = 1046
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 288 QEDAHEFMRFAIDKMQSACLDEF---------------GGEKVVDLSIQETTIIQHIFGG 332
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK++CD C+
Sbjct: 333 RLRSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEECLNQFTAVEWLDGDNKYRCDGCS 392
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 393 DYVKAQKHLTVHQAPNI 409
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GLVN GN+C++N VLQ L +P +L + A+ + L +L +I
Sbjct: 204 GLVNCGNSCFANVVLQCLSCTRPLVAYLLWKDHARECSRRHEDWCFLCELQSHIQKATDS 263
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ AP K ++ L Q+DAHEF+ F I+ + C+
Sbjct: 264 LHPFAPMKILSHLPNIGGNLGFGKQEDAHEFMRFAIDKMQSACL 307
>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 944
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 277 QEDAHEFMRFAIDKMQSACLDEY---------------GGEKAVDLSIQETTIIQHIFGG 321
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ ++ DL V+I+ + S+ +CL F++ E L DNK+KCD C
Sbjct: 322 RLQSQVQCTTCGMVSNRYDNMMDLTVEIQGDAESLERCLDQFTAVEWLDGDNKYKCDGCN 381
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 382 DYVKARKHLSVQQAPNI 398
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 20/127 (15%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V++ P IL + LKRF+ R K++ RV FP+EL L D +Y+L AV
Sbjct: 390 LSVQQAPNILTITLKRFQ----TGRFGKLNKRVTFPMELDLTPYMSCTDGSD-LYDLYAV 444
Query: 389 VIHCG--SGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+H + GHYI +K + W DD V +D+ + ++ Y
Sbjct: 445 VVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVH------------AQGAY 492
Query: 446 ILFYQSR 452
+L Y R
Sbjct: 493 MLLYSRR 499
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + + C L +L +I
Sbjct: 193 GLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECSVRHEDWCFLCELQCHIQRASGS 252
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ AP ++ L Q+DAHEF+ F I+ + C+
Sbjct: 253 LHPFAPTNILSHLPNIGGNLGVGRQEDAHEFMRFAIDKMQSACL 296
>gi|218191394|gb|EEC73821.1| hypothetical protein OsI_08545 [Oryza sativa Indica Group]
Length = 672
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 117/300 (39%), Gaps = 95/300 (31%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPF--RDRVLEYKAKNKKNKE------------------ 266
GL N GNTC+ NS+LQ + P R R ++ A +K+
Sbjct: 160 GLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDESIRR 219
Query: 267 --------TLLSCLADLFHNIATHKKKVG--------SIAPKKFITRLRK---------- 300
L CL D T K SI + F RL+
Sbjct: 220 PGQQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFDEESIVKQVFGGRLKSKLTCCECGHC 279
Query: 301 ------------EKDEFDNYMQQ-----------DAHEFLNFLINHINEKCMKVKKL--- 334
E D+ DN + DA + LN H N K K K+L
Sbjct: 280 SETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLN--CEHCNAKVCKNKQLMLD 337
Query: 335 --PMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNPDRMYNLVAVVI 390
P ++A+HLKRF +D+ K+ VV+PLEL L FH D +N + Y+L VV
Sbjct: 338 RSPDVVAIHLKRFTSLDRSVE--KIDKHVVYPLELDLKPFHCDPD-INKELKYDLYGVVE 394
Query: 391 HCGSGPNRGHYI-SIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
H GS P+ GHY+ S+ S W L +D VD L S+ ++ GYILFY
Sbjct: 395 HSGS-PSYGHYVCSVRSSPSTWHLMNDSHVD------------LISEASALNQEGYILFY 441
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L++++++ +P+ S F+E + V ++F G
Sbjct: 223 QEDAHEFLRCLLDNLDKCTTDPKPKDKP-----------------SSFDEESIVKQVFGG 265
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC-SDNKFKCDNC 196
L S+ C C S E F DL ++I Q ++ L F+ E + +++K C++C
Sbjct: 266 RLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLNCEHC 324
>gi|222623479|gb|EEE57611.1| hypothetical protein OsJ_08002 [Oryza sativa Japonica Group]
Length = 672
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 117/300 (39%), Gaps = 95/300 (31%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPF--RDRVLEYKAKNKKNKE------------------ 266
GL N GNTC+ NS+LQ + P R R ++ A +K+
Sbjct: 160 GLGNMGNTCFLNSILQCVTHTVPLFLRLRSTDHCAPCSYDKDGFCSFCALKEHIDESIRR 219
Query: 267 --------TLLSCLADLFHNIATHKKKVG--------SIAPKKFITRLRK---------- 300
L CL D T K SI + F RL+
Sbjct: 220 PGQQEDAHEFLRCLLDNLDKCTTDPKPKDKPSSFDEESIVKQVFGGRLKSKLTCCECGHC 279
Query: 301 ------------EKDEFDNYMQQ-----------DAHEFLNFLINHINEKCMKVKKL--- 334
E D+ DN + DA + LN H N K K K+L
Sbjct: 280 SETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLN--CEHCNAKVCKNKQLMLD 337
Query: 335 --PMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNPDRMYNLVAVVI 390
P ++A+HLKRF +D+ K+ VV+PLEL L FH D +N + Y+L VV
Sbjct: 338 RSPDVVAIHLKRFTSLDRSVE--KIDKHVVYPLELDLKPFHCDPD-INKELKYDLYGVVE 394
Query: 391 HCGSGPNRGHYI-SIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
H GS P+ GHY+ S+ S W L +D VD L S+ ++ GYILFY
Sbjct: 395 HSGS-PSYGHYVCSVRSSPSTWHLMNDSHVD------------LISEASALNQEGYILFY 441
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L++++++ +P+ S F+E + V ++F G
Sbjct: 223 QEDAHEFLRCLLDNLDKCTTDPKPKDKP-----------------SSFDEESIVKQVFGG 265
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC-SDNKFKCDNC 196
L S+ C C S E F DL ++I Q ++ L F+ E + +++K C++C
Sbjct: 266 RLKSKLTCCECGHCSETYEPFLDLSLEIDQADNLIDALESFTKLERIGDAEDKLNCEHC 324
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + +L+ D GG+ + E T + IF G
Sbjct: 271 QEDAHEFMRFAIDRM---------------QLACLDEFGGEKAVCAHSRETTIIQHIFGG 315
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C NC VS++ E+ DL V+I + S+ +CL F+ E L DNK+KCD C
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLHGDNKYKCDGCN 375
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 376 DYVKASKRLTIKQAPNI 392
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLAD---LFHNIATHK 283
GL+N GN+C++N VLQ L F +P +LE +N+ C+ D F TH
Sbjct: 189 GLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNE--------CVRDDWCFFCEFQTHV 240
Query: 284 KKVGSIA----PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
++ A P I RL Q+DAHEF+ F I+ + C+
Sbjct: 241 ERASQNAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACL 290
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +K+ P IL + LKRF+ R K++ +V FP L L +A + +Y L AV
Sbjct: 384 LTIKQAPNILTIALKRFQ----SGRFGKLNKKVAFPETLDLSPYMSEAGDRKDVYRLYAV 439
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKID 423
V+H + GHYI +K DF W DD V K+D
Sbjct: 440 VVHVDMLNASFFGHYICYIK--DFSGNWYRIDDCKVFKVD 477
>gi|326524007|dbj|BAJ97014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1026
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 219 QEDAHEFMRFAIDKMQSACLDEY---------------GGEKVVDHSTQETTVIQHIFGG 263
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ E+ DL V+I + S+ +CL F++ E L DNK+KCD C
Sbjct: 264 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEKCLDQFTAVEWLDGDNKYKCDGCN 323
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 324 DYVKARKHLTVHQAPNI 340
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GLVN GN+C++N VLQ L + +P +LE + C L +L +I
Sbjct: 135 GLVNCGNSCFANVVLQCLSYTRPLVAYLLEKDHTRQCTIRHEDWCFLCELQSHIQKAIDS 194
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
V + AP ++RLR Q+DAHEF+ F I+ + C+
Sbjct: 195 VHAFAPMNILSRLRNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 238
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + +L+ D GG+ + E T + IF G
Sbjct: 271 QEDAHEFMRFAIDRM---------------QLACLDEFGGEKAVCAHSRETTIIQHIFGG 315
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C NC VS++ E+ DL V+I + S+ +CL F+ E L DNK+KCD C
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLHGDNKYKCDGCN 375
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 376 DYVKASKRLTIKQAPNI 392
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLAD---LFHNIATHK 283
GL+N GN+C++N VLQ L F +P +LE +N+ C+ D F TH
Sbjct: 189 GLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRNE--------CVRDDWCFFCEFQTHV 240
Query: 284 KKVGSIA----PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
++ A P I RL Q+DAHEF+ F I+ + C+
Sbjct: 241 ERASQNAQPFSPNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACL 290
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +K+ P IL + LKRF+ R K++ +V FP L L +A + +Y L AV
Sbjct: 384 LTIKQAPNILTIALKRFQ----SGRFGKLNKKVAFPETLDLSPYMSEAGDRKDVYRLYAV 439
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKID 423
V+H + GHYI +K DF W DD V K+D
Sbjct: 440 VVHVDMLNASFFGHYICYIK--DFSGNWYRIDDCKVFKVD 477
>gi|429327234|gb|AFZ78994.1| Ubiquitin carboxyl-terminal hydrolase family member protein
[Babesia equi]
Length = 398
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 25/160 (15%)
Query: 68 LCSS-DEFDNYMQQDAHEFLNFLIN-HINEVILSE----RPQSNAKSKLSAPDGGGGDNH 121
+CS+ D+F QQDAHEFL ++IN I+E+ E RP+S + N
Sbjct: 140 VCSTNDDFVLGDQQDAHEFLTYIINLMIDEIRELEDDYLRPKSQSLK-----------NT 188
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSS 181
E+ TW++E+ +G + SET+C C+ V+ E F + +DI N I CL +
Sbjct: 189 GKRKTEKRTWLNELVEGFVKSETRCHECKNVTGIMEPFITISLDINDNCDINSCLERYCD 248
Query: 182 TETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
E L ++F CD C Y +A K++ D PP
Sbjct: 249 AELLTGKDQFFCDTCNKYCDAS--------KKVVFDLMPP 280
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 319 FLINHINEKCMKVKK-----LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS 373
F + N+ C KK +P +L LHLKRFKY + + K + L + +
Sbjct: 258 FFCDTCNKYCDASKKVVFDLMPPLLILHLKRFKYNVQAGNNQKDIYSAFERLPYSVISRN 317
Query: 374 DDAVNPDR-----MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIE 428
+ R +Y L +V++H G+ P+ GHYI+I + + W DD + K +
Sbjct: 318 IIKIKCQRHTHPIVYELFSVILHIGTSPHYGHYINISRMGEQWFKCDDTSIHK-----LH 372
Query: 429 DFFGLTSD-HQKSSETGYILFYQSRD 453
+F D H S+ YILFY+ ++
Sbjct: 373 NFHQDVGDEHSSGSDGSYILFYRIKE 398
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIAT 281
N +Y G N N CY N VLQ+LY FR R++ K K + L L+
Sbjct: 57 NIKYCGFENRSNNCYCNVVLQSLYSSHDFRTRMIRLK----KIGTGISGELGKLYSKCVA 112
Query: 282 HKKKVGSI-----------APKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
V I +PK F+ ++ D+F QQDAHEFL ++IN
Sbjct: 113 ANGIVIYIFSGFYDVIEIQSPKSFLKKVCSTNDDFVLGDQQDAHEFLTYIIN 164
>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL +I+ + V L+E G N S S E+ T +
Sbjct: 677 QLGNGREEDAHEFLRHVIDTMQSVCLTE----------------AGVNASGSLEEDTTLM 720
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK-QNTSITQCLRGFSSTETLCSDNKF 191
+ F G L S+ KC+ C S E DL V+I+ + T++ + LR F+STETL +NK+
Sbjct: 721 GQTFGGYLRSKIKCMRCGGKSEHQERMMDLTVEIEGEITTLVEALRRFTSTETLDGENKY 780
Query: 192 KCDNCASYQEAQ 203
C C SY++A+
Sbjct: 781 HCVRCKSYEKAK 792
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 3/105 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGLVN GN+CY+N+VLQ L F P +L+ K+ NK+ +C + I K
Sbjct: 600 FGLVNCGNSCYANAVLQCLAFTPPLTAYLLQGLHLKSCANKKWCFTC--EFERLILKSKD 657
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+++P I+ L+ + N ++DAHEFL +I+ + C+
Sbjct: 658 TKSAVSPMGIISHLQNIGSQLGNGREEDAHEFLRHVIDTMQSVCL 702
>gi|168011115|ref|XP_001758249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690705|gb|EDQ77071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 430
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ I+ + + L DG GG+N + EE T +H IF G
Sbjct: 180 QEDAHEFMISAIHLMQSICL---------------DGAGGENAVDACTEETTLIHHIFGG 224
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ C C S+ E DL V+I +N S+ L FS+ E L +NK+KCD C
Sbjct: 225 LLQSQVTCKQCRHQSNSYEIMMDLTVEINRNVRSLEDALAQFSAHEFLHGENKYKCDRCD 284
Query: 198 SYQEA-------QGPNI 207
+Y +A + PN+
Sbjct: 285 AYVDAYKRIAVHEAPNV 301
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 30/158 (18%)
Query: 306 DNYMQQDAHEFLNFLINHINEKC---------MKVKKLPMILALHLKRFKYMDKMNRHVK 356
D Q AHEFL+ + ++C + V + P +L + LKRFK R+ K
Sbjct: 261 DALAQFSAHEFLHGENKYKCDRCDAYVDAYKRIAVHEAPNVLVVTLKRFK----GGRYEK 316
Query: 357 VSHRVVFPLELRLF-HLSDDAVNPDRMYNLVAVVIHC--GSGPNRGHYISIVKS-HDFWL 412
++ VVFP L L ++S++ P YNL AVV+H + + GHY +V + W
Sbjct: 317 LTKEVVFPEILDLTPYMSENGDRPPH-YNLYAVVVHVNESNASHYGHYFCLVMNPSSHWY 375
Query: 413 LFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQ 450
DD V ++ + + +S+ YIL Y+
Sbjct: 376 RVDDMKVTEVSVNWV------------TSQEAYILLYK 401
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 21/129 (16%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMYN 384
+K + V K PM L + LKRF + K+++ + +P L L LSD+ +P MY
Sbjct: 328 KKQITVHKAPMALCIQLKRFSPWGR-----KITNMIDYPETLSLNEILSDNQTSP--MYQ 380
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L V++H GSGPN GHY + VK++ WL +DD VD I ++ + S+
Sbjct: 381 LYGVIVHAGSGPNSGHYYTFVKNYAGKWLRINDDEVDTIPRAPL------------GSKN 428
Query: 444 GYILFYQSR 452
Y+LFY R
Sbjct: 429 AYMLFYMRR 437
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S Y Q+DAHEFL F I+ + +LSA G +
Sbjct: 214 SPTLRQYRQEDAHEFLRFSIDAL---------------QLSA---QNGVKSVPEKLAATS 255
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WV+ +F G S C +C S + DL VDI + ++ Q LR FS+ E L NK
Sbjct: 256 WVYRLFGGQFRSRVTCGSCGHNSDTFDTLLDLSVDIAKCDTLKQALRMFSAIERLEGSNK 315
Query: 191 FKCDNC 196
+KC+ C
Sbjct: 316 YKCEKC 321
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATH---K 283
GL N GN+C+ NS LQ L P + +L ++ + K C +A +
Sbjct: 136 GLHNLGNSCFMNSTLQILLHTAPLLNVLLSHRHDSCKLALDGSYCFTCQLRKLALDILCR 195
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK-VKKLPMILA 339
K + +P+ L++ Y Q+DAHEFL F I+ + VK +P LA
Sbjct: 196 KSRQARSPEDIFRNLKRISPTLRQYRQEDAHEFLRFSIDALQLSAQNGVKSVPEKLA 252
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 65/268 (24%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHK--- 283
G N GNTC+ NSVLQAL P + E++ +++ L CL D H +
Sbjct: 3 GYHNLGNTCFMNSVLQALAHTPP----LAEFRLGRQEDSHEFLRCLLDAMHEACLKRFKP 58
Query: 284 KKVGSIAPKKFI-----TRLRKEKD-EFDNYMQQDAHEFLNFLINHINE----------- 326
K +A F+ RLR + + E +Y+ + FL+ + IN
Sbjct: 59 KPPPELAATTFVYRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLE-INRAQSLERALSAF 117
Query: 327 ------------KCMKVKKL------------PMILALHLKRFKYMDKMNRHVKVSHRVV 362
+C K KL P +L +H KRF+Y K++ +V
Sbjct: 118 TAPEVLDGPNKYRCPKNNKLVRAVKRISVEEAPNVLTVHFKRFEYG---GFGAKINKKVD 174
Query: 363 FPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDK 421
F +L L + P ++Y L V++H G N GHYI VK+ + W + DD V
Sbjct: 175 FGTQLDLRPYMSNVKGPQQLYELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTA 234
Query: 422 IDQSTIEDFFGLTSDHQKSSETGYILFY 449
+ + T+ D + YILFY
Sbjct: 235 VGERTVLD------------QRAYILFY 250
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
EF Q+D+HEFL L++ ++E L +R + +L+A T+V
Sbjct: 28 EFRLGRQEDSHEFLRCLLDAMHEACL-KRFKPKPPPELAAT----------------TFV 70
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFK 192
+ IF G L S+ +C + VS + F DL ++I + S+ + L F++ E L NK++
Sbjct: 71 YRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLEINRAQSLERALSAFTAPEVLDGPNKYR 130
Query: 193 C 193
C
Sbjct: 131 C 131
>gi|242096572|ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
gi|241916999|gb|EER90143.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
Length = 979
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T + IF G
Sbjct: 271 QEDAHEFMRFAIDKMQSACLDEY---------------GGEKAVDLSTQETTIIQHIFGG 315
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ +C C VS++ ++ DL V+I+ + S+ +CL F++ E L DNK+KCD C
Sbjct: 316 RLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAIEWLDGDNKYKCDGCN 375
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 376 DYVKARKHLSVHQAPNI 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V + P IL + LKRF+ R K++ RV FP+EL L + D +Y+L
Sbjct: 382 KHLSVHQAPNILTITLKRFQS----GRFGKLNKRVTFPMELDLTPYTSCTDGSD-LYDLY 436
Query: 387 AVVIHCG--SGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYI +K + W DD V +D+ + ++
Sbjct: 437 AVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVH------------AQG 484
Query: 444 GYILFYQSR 452
Y+L Y R
Sbjct: 485 AYMLLYSRR 493
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GN+C++N VLQ L +P +L + + C L +L +I
Sbjct: 187 GLMNCGNSCFANVVLQCLSCTRPLVSYLLGKDHSRECSMRHEDWCFLCELQCHIHRASGS 246
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ AP ++ L Q+DAHEF+ F I+ + C+
Sbjct: 247 LHPFAPTNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACL 290
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ N ++DAHEFL + I+ + V L E G N S EE T
Sbjct: 96 GSQLGNGREEDAHEFLRYAIDAMQSVCLKE----------------AGVNAMDSFAEETT 139
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDN 189
+ F G L S+ KC+ C S + E DL V+I+ N + LR F+S E L DN
Sbjct: 140 LIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGNIGKLEDALRRFTSAEILDGDN 199
Query: 190 KFKCDNCASYQEAQ 203
K++C C SY++A+
Sbjct: 200 KYQCGRCKSYEKAK 213
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL+N GN+CY+N+VLQ L F P ++ +K+ N+E SC F +I K+
Sbjct: 22 GLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKSCLNRECCFSC---EFESIILKAKE 78
Query: 286 VGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
S ++P +++L+ + N ++DAHEFL + I+ + C+K
Sbjct: 79 GKSPLSPLGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLK 124
>gi|344257555|gb|EGW13659.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 306
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Q+DAHEFL F +N ++E L R S SK S P
Sbjct: 8 TGAFHRQKQEDAHEFLMFTLNAMHEACLQGRKPSEESSKDSTP----------------- 50
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
++EIF G S+ +CL C+ S F D+ +DI + S+ Q L E LC +N
Sbjct: 51 -IYEIFGGSWRSQVRCLQCQGTSDAFSPFLDVLLDIHEAHSVKQALEYLVKAEELCGENA 109
Query: 191 FKCDNC 196
+ CD+C
Sbjct: 110 YFCDHC 115
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 24/151 (15%)
Query: 319 FLINHINEKCMKVKKLPM-----ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS 373
+ +H EK +K L + +L L L R + K +V +P L L
Sbjct: 110 YFCDHCQEKTPALKSLAIQGASKVLLLVLNR----SSDSAGGKTDRKVRYPESLDLRPYM 165
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFG 432
+ +Y L AV++H G+ + GHY V++ + W DD V + + +++
Sbjct: 166 SQSNRGPLVYALYAVLVHAGATCHSGHYFCYVRAGNGKWYKMDDSTVTRCEVASV----- 220
Query: 433 LTSDHQKSSETGYILFYQSRDSTDARTMNSN 463
SE+ Y+LFY TD R + N
Sbjct: 221 -------LSESAYLLFYV--QGTDGRGDSVN 242
>gi|342183942|emb|CCC93423.1| putative ubiquitin carboxyl-terminal hydrolase [Trypanosoma
congolense IL3000]
Length = 646
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 11/113 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK-------ETLLSCLADLF-- 276
GL N NTCY NSV+Q LY C P R R+L+ A ++K K T+L+ A+LF
Sbjct: 140 IGLENTNNTCYFNSVIQLLYHCAPLRTRLLQLHAAHEKKKGSSGLEGNTILALTAELFAK 199
Query: 277 -HNIATHKKKVG-SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
H + KK+ ++P++ ++ +++ F+N Q DAHEF FL+N + ++
Sbjct: 200 MHKVNNSKKRQKYPLSPRQLLSCVQQLNAMFNNNHQHDAHEFAMFLVNELVDR 252
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 121 HSSSGFE--EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRG 178
+S+SG++ P + ++ G S T C C+ VS E F DL +D+ + +S+ CL
Sbjct: 352 NSTSGWDWGVPPSLEKVLSGQFVSLTGCCECDHVSVTREAFIDLSLDVVEGSSLRYCLER 411
Query: 179 FSSTETLCSDNKFKCDNCASYQEAQ 203
FS+TE DNK CD C AQ
Sbjct: 412 FSTTECFDGDNKLYCDQCKKKVTAQ 436
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 377 VNPDRM--YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLT 434
V+P R + L V H GSG GHY + V+ + W FDD V ++ + ++ ++G
Sbjct: 566 VSPRRRGRFALNGFVSHRGSGLASGHYFTCVRHGNTWRCFDDSAVTQLTEREVQQYWGTP 625
Query: 435 SD 436
D
Sbjct: 626 VD 627
>gi|358333533|dbj|GAA30868.2| ubiquitin carboxyl-terminal hydrolase 36/42 [Clonorchis sinensis]
Length = 835
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 77 YMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIF 136
Y Q+DAHEFL L++ + + ++ G S E + IF
Sbjct: 284 YQQEDAHEFLLGLLSRMEDNTMA------------------GFGKVSRAVAETNVIRRIF 325
Query: 137 QGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
G++ SE C +C VS++DE F+L +DI S+ QCL + E LC N +KC+NC
Sbjct: 326 GGVVRSEVTCHSCRKVSARDEQCFNLSMDITNGRSLQQCLFNYIRHEELCGQNAYKCENC 385
Query: 197 ASYQEA 202
+ A
Sbjct: 386 RQLRAA 391
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 18/121 (14%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGP 396
IL + RF +R+ K+ HRV FP L D P +Y L A V H G
Sbjct: 403 ILIIQFNRF------SRNHKLDHRVEFPSSFNLRPFMTDNKGPPVLYRLYATVNHEGHSC 456
Query: 397 NRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSRDSTD 456
GHY++ + + W +D V+ + + + Y+LFY++ + T
Sbjct: 457 RSGHYVAFTRRNGTWYSHNDSFVNSTNPEHVLR------------QAPYLLFYEAVNPTP 504
Query: 457 A 457
A
Sbjct: 505 A 505
>gi|290994100|ref|XP_002679670.1| peptidase C19 family ubiquitinyl hydrolase [Naegleria gruberi]
gi|284093288|gb|EFC46926.1| peptidase C19 family ubiquitinyl hydrolase [Naegleria gruberi]
Length = 1139
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRMYNL 385
K +K K +P I LHLKRF Y +K+ + V FP EL + +L D+ N +Y L
Sbjct: 293 KGLKFKTIPYIFTLHLKRFDYDYTTWNRIKLGNMVTFPFELDVSKYLEDNTQNA--IYEL 350
Query: 386 VAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFG----LTSDHQK 439
V++H G+ GHY + +K S D W F+D V +ID+ ++ FG ++
Sbjct: 351 FGVLVHSGTSSG-GHYYAYIKSFSSDKWYNFNDSNVSEIDREQVKVMFGNNDSSSTGRFA 409
Query: 440 SSETGYILFYQSRDSTDARTMNSNDCRV 467
SS Y+L Y+ RD + +NS D +
Sbjct: 410 SSTNAYMLLYRKRD--EKLNINSVDMSI 435
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA---KNKKNKETLLSCLADLFHNI 279
E + GL N G TCY NS++Q+LY FR +LE++ K+ + + L LF +
Sbjct: 82 EHFVGLSNQGATCYLNSLIQSLYHTPEFRRMILEWRYNPDKDPSKERCIPYQLQRLFAYL 141
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
A K+K P +T+ + D ++Q D E L + I+
Sbjct: 142 ALSKRKA---VPTTHLTK-SFGWTQSDAFVQHDVQELNRILFDAID 183
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL F ++ + + L N +KL D S + T +++IF G
Sbjct: 191 QEDAHEFLCFTVDALQKACL------NGSTKL--------DRSSQAT----TLIYQIFGG 232
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS E F D+ +DIK TS+T+ L F E L +N +KC C
Sbjct: 233 YLRSRVKCLNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKC 290
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GNTC+ NS LQ L + P + +L E SC + F + T +
Sbjct: 107 VGLQNLGNTCFLNSTLQCLTYTPPLANYMLSL--------EHTKSCHVEGFCMMCTMESH 158
Query: 286 V--------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ +I P I L++ F Q+DAHEFL F ++ + + C+
Sbjct: 159 INQVLCCSNNAIKPTSVINGLKRIGKHFHFGSQEDAHEFLCFTVDALQKACL 210
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 33/141 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFHL 372
KC K KK+ P +L + LKRF K+N+ VK +P L L
Sbjct: 286 KCSKCKKMVPASKRYTIHRSSNVLTISLKRFANFTGGKINKDVK------YPEYLDLRAY 339
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFF 431
++ +Y L AV++H G N GHY+ +K+ + W +D V+ D T+ +
Sbjct: 340 MSQSIGEPLIYALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLN-- 397
Query: 432 GLTSDHQKSSETGYILFYQSR 452
+ Y+LFY R
Sbjct: 398 ----------QQAYVLFYIRR 408
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F Q+DAHEFL ++I+ + L + + A GGGD S T
Sbjct: 101 AENFRCGRQEDAHEFLRYVIDACHNTCLRLK----KLRRKGAEANGGGDEAGGS-----T 151
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
V EIF G L S+ KCL C S+K ++ D+ +D+ + S+ ++ F E L +NK
Sbjct: 152 VVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLKDSMQKFFQPEVLDGNNK 211
Query: 191 FKCDNCASYQEA-------QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQA 243
+KCD+C A Q PNI ++ + RF E G + ++ +
Sbjct: 212 YKCDSCKKLVAAKKQMSILQAPNILVIQLK----RF---EGILGGKIDKAVAFEEVLVLS 264
Query: 244 LYFCKPFRDRVLEYK 258
+ CK +D EYK
Sbjct: 265 SFMCKASQDPQPEYK 279
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 205 PNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN 264
P++ + +++ G PP GL N GN+CY NSVLQ L + P + L + + +
Sbjct: 9 PSLLSQKRKTGTG--PP----LGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCD 62
Query: 265 KETLLSCLADLFHNIA-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
L IA + + + AP K + +R + F Q+DAHEFL ++I+
Sbjct: 63 SSGSSCPFCILEKQIARSLRLDLTHDAPSKIQSCIRIFAENFRCGRQEDAHEFLRYVIDA 122
Query: 324 INEKCMKVKKL 334
+ C+++KKL
Sbjct: 123 CHNTCLRLKKL 133
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 16/138 (11%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M + + P IL + LKRF+ + V+ V L + S D P Y L
Sbjct: 224 KKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFMCKASQD---PQPEYKL 280
Query: 386 VAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
++H G P GHY + +K + W DD V +T+++ SE
Sbjct: 281 FGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCV---TVATLQEVL---------SEKV 328
Query: 445 YILFYQSRDSTDARTMNS 462
YILF+ + + NS
Sbjct: 329 YILFFSRTNQRPVSSSNS 346
>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1036
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL ++ + V L E GDN S S EE +
Sbjct: 583 QLGNGREEDAHEFLRLVVETMQSVCLME----------------SGDNMSDSLKEETNLM 626
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK-QNTSITQCLRGFSSTETLCSDNKF 191
F G L S+ KC+ C S + E DL V+I+ + ++ + LR F+S ETL +NK+
Sbjct: 627 GLTFGGYLQSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEEALRQFTSAETLDGENKY 686
Query: 192 KCDNCASYQEAQ 203
+C C SY++A+
Sbjct: 687 RCVRCKSYEKAK 698
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL+N GN+CY+N+VLQ L P +L+ +K+ NK+ +C F ++ K
Sbjct: 506 FGLINCGNSCYANAVLQCLAVTPPLTAYLLQGLHSKSCANKKWCFTC---EFESLILKSK 562
Query: 285 KVGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
S ++P +++L+ + N ++DAHEFL ++ + C+
Sbjct: 563 DTNSPMSPLGILSQLQNIGSQLGNGREEDAHEFLRLVVETMQSVCL 608
>gi|303281438|ref|XP_003060011.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458666|gb|EEH55963.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 585
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 37/151 (24%)
Query: 327 KCMKVKKLPMILALHLKRFKY--MDKMNRH-----VKVSHRVVFPLEL------------ 367
K M +++LP LALHLKRF++ K N H K+ V FP L
Sbjct: 442 KQMAIRRLPPTLALHLKRFEHGGAKKQNAHGDGGGSKIESHVSFPFVLPMRAYCASTAIR 501
Query: 368 -----RLFHLSDDAVNPD-RMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDK 421
RL +SD D + Y+L AVV+H G G + GHYI+ V+ W DD V +
Sbjct: 502 ERYGNRLTPMSDGGGADDPKNYDLFAVVVHSGQGSDSGHYIAYVQWQGAWFRCDDHQVTR 561
Query: 422 IDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
D T+ ++ Y+LFYQ+R
Sbjct: 562 ADPITV------------ATAQAYLLFYQAR 580
>gi|123392259|ref|XP_001300216.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121881219|gb|EAX87286.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 978
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD-DAVNPDRMYNL 385
K K +LP +L L+RF+Y N +KV+ R FP EL + D ++ + D +Y+L
Sbjct: 326 KTTKFWQLPNVLHFLLQRFEYNPMGNGMIKVNDRFEFPDELDMKEFMDPESEDKDTVYDL 385
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+IH G N GHY +++K W LF+DD V K+ +ST+ FG + + + Y
Sbjct: 386 FGVLIHIGFA-NAGHYEAMMKIEGNWYLFNDDEVTKVPESTVRTTFG----GENTYGSAY 440
Query: 446 ILFYQSRDSTDART 459
+ Y R D T
Sbjct: 441 FVTYVRRSQKDLMT 454
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-CLADLFHNIATHKKK 285
GL N G TCY NS+LQ L+ FR V + ++ +T ++ L LF + +
Sbjct: 152 GLTNLGATCYLNSMLQCLFHTPAFRRAVYDMPTDGTEDVKTSIAYSLQRLFTLM-----Q 206
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ + P D + Q D EFL L++++
Sbjct: 207 MSPLTPSTQELTTSFGWGITDQFSQHDVQEFLRVLVDNL 245
>gi|296419248|ref|XP_002839229.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635239|emb|CAZ83420.1| unnamed protein product [Tuber melanosporum]
Length = 578
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 15/130 (11%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNR--HVKVSHRVVFPLE-LRLFHLSDDAVNPDRMY 383
K + LP +L +HLKRF++ R KV V FPL L + + V+ +Y
Sbjct: 412 KSIAFGVLPHVLCIHLKRFRWRTHKIRGGKQKVDTHVRFPLAGLDMGAWCERDVDSPILY 471
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
+L AVV+H G+G N GHY++ K + W L DDD + K+ ++ +
Sbjct: 472 DLYAVVVHQGTGANFGHYVAYTKHQEEWWLLDDDRITKVPSESV------------AKSK 519
Query: 444 GYILFYQSRD 453
Y+LFY+ RD
Sbjct: 520 AYLLFYKRRD 529
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 34/122 (27%)
Query: 75 DNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHE 134
+ + QQDA EFL + + + + SE+ + EE T V
Sbjct: 283 ERHEQQDAQEFLRCSLERMQDELASEQIE-----------------------EEDTIVQT 319
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ-----------NTSITQCLRGFSSTE 183
+F GIL ++ C +C + K + F DL + I + ++++ +CL F++TE
Sbjct: 320 VFGGILWNKIICHSCSEYTIKPDPFLDLSLVIPEQLSPVTKGDVRSSTLEECLNLFATTE 379
Query: 184 TL 185
L
Sbjct: 380 EL 381
>gi|242789882|ref|XP_002481453.1| ubiquitin C-terminal hydrolase Ubp8, putative [Talaromyces
stipitatus ATCC 10500]
gi|218718041|gb|EED17461.1| ubiquitin C-terminal hydrolase Ubp8, putative [Talaromyces
stipitatus ATCC 10500]
Length = 576
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 27/156 (17%)
Query: 305 FDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP 364
+ Y Q H + + L K +++K+LP +L + +KRF+ D R K+ ++ FP
Sbjct: 434 MEGYQCQGCHSYPDKLT-----KQLRIKQLPAMLCMQMKRFEQTDSETR--KMQGKIDFP 486
Query: 365 LELRLFHLSDDAVNPDR--------MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDD 416
LE+ + + + + MY+L + ++H G+G N GHYI+ ++ D W LF+D
Sbjct: 487 LEINMQPYTVASPTSKKTTIRSDIYMYDLASAIVHDGAGLNEGHYIAYIRQGDRWCLFND 546
Query: 417 DVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
D V + + + L +D Y+LFY R
Sbjct: 547 DKVTLVSEGDV-----LNAD-------AYLLFYTLR 570
>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 51 QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKL 110
Q KI+L L D+ SS F Q+DAHEFL + I+ + V + E +S
Sbjct: 426 QGKIALSPTGILSHLPDIGSS--FGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRL- 482
Query: 111 SAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN- 169
EE T + IF G L S+ +C C+ S + E DL V+I +
Sbjct: 483 ---------------HEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDI 527
Query: 170 TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+S+ L F+STE L DNK+KC C S++ A+
Sbjct: 528 SSLEGALERFTSTEVLDGDNKYKCSRCKSHERAK 561
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N+VLQ L F +P +L +KN KE C + + ++
Sbjct: 369 FGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKL--VGEGRQ 426
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+++P ++ L F Q+DAHEFL + I+ + CMK + LH
Sbjct: 427 GKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLH 483
>gi|168013682|ref|XP_001759420.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689350|gb|EDQ75722.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP- 129
+ F N Q+DAHE L + I N V + SK EEP
Sbjct: 78 AKHFRNGRQEDAHELLRYAIEACNHVCVQLHKIVQVGSK-----------------EEPN 120
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
T V EIF G+L S+ KCL+C T S+K ++ DL +DI + +S+++ L F E L +N
Sbjct: 121 TVVKEIFGGLLQSQVKCLSCSTESNKLDEIMDLTLDIVRLSSLSEALCRFFQPEVLDGEN 180
Query: 190 KFKCDNCASYQEA-------QGPNISALE 211
K++CD C A + PN+ ++
Sbjct: 181 KYRCDQCKKLSPARKQMSVYRAPNVLVIQ 209
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 25/124 (20%)
Query: 329 MKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
M V + P +L + +KRF+ Y K++RHV R+ L+ + Y+L
Sbjct: 197 MSVYRAPNVLVIQMKRFEDIYGGKIDRHVHFEERLC---------LAGYMCRAGK-YSLY 246
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VV+H GS + GHY S VK S W DD V +++ T+ +E Y
Sbjct: 247 GVVVHAGSSQDSGHYYSYVKESSGKWYCCDDARVSQVNAQTV------------LAEKAY 294
Query: 446 ILFY 449
+LFY
Sbjct: 295 MLFY 298
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRV---LEYKAKNKKNKETLLSCLADLFHNIATHK 283
GL N GNTCY NSVLQ L + P + L N C +L I
Sbjct: 1 GLKNLGNTCYLNSVLQCLTYTPPLANFCMSNLHSILCTSPNNSNCPFCFLEL--RIQRSL 58
Query: 284 KKVGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
G I AP K RL+ F N Q+DAHE L + I N C+++ K+ +
Sbjct: 59 TFEGPIDAPIKIHNRLQYFAKHFRNGRQEDAHELLRYAIEACNHVCVQLHKIVQV 113
>gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1063
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL +I+ + V L E G N S E+ T +
Sbjct: 680 QLANGREEDAHEFLRHVIDTMQSVCLME----------------AGVNALGSLEEDTTLM 723
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK-QNTSITQCLRGFSSTETLCSDNKF 191
+ F G L S+ KC+ C S + E DL V+I+ + T++ + LR F+STETL +NK+
Sbjct: 724 GQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIEGEITTLVEALRRFTSTETLDGENKY 783
Query: 192 KCDNCASYQEAQ 203
C C SY++A+
Sbjct: 784 HCVRCKSYEKAK 795
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 3/105 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKK 284
FGL+N GN+CY+N+VLQ L F P +L+ +K+ NK+ +C + I K
Sbjct: 603 FGLINCGNSCYANAVLQCLAFTPPLTAYLLQGSHSKSCANKKWCFTC--EFERLILKSKD 660
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+++P I+ L+ + N ++DAHEFL +I+ + C+
Sbjct: 661 TKSAVSPMGIISHLQNIGSQLANGREEDAHEFLRHVIDTMQSVCL 705
>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
Length = 978
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 51 QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKL 110
Q KI+L L D+ SS F Q+DAHEFL + I+ + V + E +S
Sbjct: 507 QGKIALSPTGILSHLPDIGSS--FGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRL- 563
Query: 111 SAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN- 169
EE T + IF G L S+ +C C+ S + E DL V+I +
Sbjct: 564 ---------------HEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDI 608
Query: 170 TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+S+ L F+STE L DNK+KC C S++ A+
Sbjct: 609 SSLEGALERFTSTEVLDGDNKYKCSRCKSHERAK 642
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N+VLQ L F +P +L +KN KE C + + ++
Sbjct: 450 FGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKL--VGEGRQ 507
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+++P ++ L F Q+DAHEFL + I+ + CMK + LH
Sbjct: 508 GKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLH 564
>gi|340369302|ref|XP_003383187.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Amphimedon queenslandica]
Length = 1041
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 200 QEAQGPNISALEKEIGPDRFP-PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QEA ++L + D F P+E G+ N GNTC+ +S+LQ L RD L K
Sbjct: 387 QEASPQPSTSLFHRLPSDLFAGPSET--GIANLGNTCFMSSILQCLSNTVEVRDFFLGEK 444
Query: 259 AKNKKNKETLLSC---LADLFHNIATH--KKKVGSIAPKKFITRLRKEKDEFDNYMQQDA 313
+ NK+ L C LA+ F+ + K+ I+P+K + +DEF Y QQDA
Sbjct: 445 YRTDINKDNPLGCQGQLAECFYTMIDKLWSGKMAYISPRKIKDLIGSRRDEFSGYAQQDA 504
Query: 314 HEFLNFLINHINEKCMKVKKLPM 336
HEF F ++ ++E ++K P+
Sbjct: 505 HEFTTFFLDGLHEDLNRIKSKPV 527
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 27/141 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDD-----AVN 378
K + V +LP IL +HLKRF + D + R K+ V FP L++ + +D A N
Sbjct: 915 KRLSVSRLPHILIIHLKRFSFSD-LTRRTKIDKHVEFPLTGLDMSPYIHTDPSSYTAATN 973
Query: 379 -PDRMYNLVAVVIHCGSGPNRGHYISIVKSHDF----WLLFDDDVVDKIDQSTIEDFFGL 433
+Y+L A V H G+ GHY++ V S + WL +DD+ V +I ++ I D
Sbjct: 974 GTPALYDLYATVNHYGAV-FAGHYVANVLSQNGDKRDWLRYDDENVTRISKNYISD---- 1028
Query: 434 TSDHQKSSETGYILFYQSRDS 454
+ Y+LFY+ R+S
Sbjct: 1029 --------NSTYLLFYRRRES 1041
>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + + L E GG+ +E T +H IF G
Sbjct: 200 QEDAHEFMRFAIDSMQSICLDEF---------------GGEKDVDPATQETTLIHHIFGG 244
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KC+ C S++ E DL V+I S+ + F++ E L DNK+KCD C
Sbjct: 245 HLQSQVKCMQCHHESNRYESMMDLAVEIHGVVDSLEDAIAQFTTIEMLDGDNKYKCDRCN 304
Query: 198 SYQEAQ 203
+Y A+
Sbjct: 305 AYVRAR 310
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GN+C++N VLQ L + +P +L ++ K+N + L HN+ ++
Sbjct: 118 GLLNCGNSCFANVVLQCLTYTRPLTAYLLNGSHEEDCKRNDWCFMCELQSHVHNV---RQ 174
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P + ++R+R + Q+DAHEF+ F I+ + C+
Sbjct: 175 NRNPFSPIRILSRIRNIGNHLGYGRQEDAHEFMRFAIDSMQSICL 219
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V + P +L + LKRF+ + K++ RV FP L + A + +Y L AV
Sbjct: 313 LTVYEAPNVLTIALKRFQ----SGKFGKLNKRVTFPEVLDMSPYMSGANDHPLLYRLYAV 368
Query: 389 VIHCG--SGPNRGHYISIVK-SHDFWLLFDDDVVDK 421
V+H + GHYI VK S+ W DD V +
Sbjct: 369 VVHVDMLNASFFGHYICFVKDSNGVWYKIDDRKVQR 404
>gi|407405747|gb|EKF30587.1| ubiquitin hydrolase, putative [Trypanosoma cruzi marinkellei]
Length = 657
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADL---------F 276
GL N+GNTCY N+V+Q LY C P R R+LE Y+ K T L
Sbjct: 178 GLENYGNTCYCNAVIQLLYHCSPLRLRLLELYQIYVKGTGHTGFEDDTLLALLADLFAKM 237
Query: 277 HNIATHKK-KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
H KK + +IAPK I+ ++++ F+N +QQDAHEF FL++ + E
Sbjct: 238 HKANNQKKHRKDAIAPKALISSIKEQNAAFNNTLQQDAHEFAMFLLSKMIE 288
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
+ IF G S T C CE + E F DL +DI+Q +S+ +C+ F S E NK
Sbjct: 401 IQVIFGGQFASLTACFECERTKTTREVFLDLSLDIEQGSSLLRCVSNFGSPELFYGANKL 460
Query: 192 KCDNCASYQEAQ 203
C++C + AQ
Sbjct: 461 HCEHCKKHVVAQ 472
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 367 LRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQST 426
+RL + D V+ + L V H G GP+ GHY + V+ + W LF+D V ++ +
Sbjct: 570 VRLMNKLDGVVHRKGRFALSGFVTHLGDGPDVGHYFTCVRHRERWCLFNDATVTELTEYE 629
Query: 427 IEDFFGLTSDHQK-SSETGYILFYQ 450
++ F+G+ + T YIL Y+
Sbjct: 630 VQKFWGVPIPVSGVVTATAYILLYE 654
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 18/124 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ FLI + + +S Q + +SK + + +H IF G
Sbjct: 287 QEDAHEFMRFLIEALQKSAVSTVGQLDERSKTT------------------SVIHGIFGG 328
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ +CL+C+ S+ + F DL ++I + ++ + LR F S E L +N+++CD C
Sbjct: 329 YLRSQVRCLSCKYESNTYDPFLDLSLEIGKCQTLDKALRHFFSPEKLLRENQYRCDGCRK 388
Query: 199 YQEA 202
Y +A
Sbjct: 389 YVDA 392
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GLVN GNTC+ N+VLQ L + +L + +NK D HN+ATH ++
Sbjct: 203 GLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSRNKGP------DALHNLATHVRR 256
Query: 286 V------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
SI P+ +++LR F Q+DAHEF+ FLI + + +
Sbjct: 257 ALSSSAGPSITPQAIVSKLRTIYKRFRLGRQEDAHEFMRFLIEALQKSAV 306
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 20/122 (16%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---FHLSDDAVNPDR--MYNLVAV 388
LP +L + LKRF ++ KV V +P L + + + A DR Y L AV
Sbjct: 401 LPNVLTVQLKRFSFISMFGS--KVGQFVQYPEILDMAPYVNKTQQASMTDRGTRYRLYAV 458
Query: 389 VIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYIL 447
++H G GHY V+ S++ W DD V Q + + YIL
Sbjct: 459 LVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQEV------------MRQQAYIL 506
Query: 448 FY 449
FY
Sbjct: 507 FY 508
>gi|125561915|gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 51 QDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKL 110
Q KI+L L D+ SS F Q+DAHEFL + I+ + V + E +S
Sbjct: 507 QGKIALSPTGILSHLPDIGSS--FGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRL- 563
Query: 111 SAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN- 169
EE T + IF G L S+ +C C+ S + E DL V+I +
Sbjct: 564 ---------------HEETTLMQLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDI 608
Query: 170 TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+S+ L F+STE L DNK+KC C S++ A+
Sbjct: 609 SSLEGALERFTSTEVLDGDNKYKCSRCKSHERAK 642
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N+VLQ L F +P +L +KN KE C + + ++
Sbjct: 450 FGLHNLGNSCYANAVLQCLMFTRPLTSYLLGGLHSKNCSKKEWCFMCEFEKL--VGEGRQ 507
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+++P ++ L F Q+DAHEFL + I+ + CMK + LH
Sbjct: 508 GKIALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLH 564
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL + I+ + V L E G N S S EE + +
Sbjct: 549 LGNGKEEDAHEFLRYAIDAMQSVCLKE----------------AGVNASGSLEEETSLIG 592
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C S + E DL V+I+ + ++ + L F+STE L +NK++
Sbjct: 593 LTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQ 652
Query: 193 CDNCASYQEA-------QGPNI 207
C C SY++A + PNI
Sbjct: 653 CSRCKSYEKAKKKLTVSEAPNI 674
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GN+CY+N+VLQ L F P L+ +K+ KE +C + I
Sbjct: 469 RPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTC--EFESLILKA 526
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
K+ ++P ++++R N ++DAHEFL + I+ + C+K
Sbjct: 527 KEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK 574
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 326 EKCMKVKKLPMILALHLKRFKY--MDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+K + V + P IL + LKRF+ K+N+ ++ FP L L + +Y
Sbjct: 663 KKKLTVSEAPNILTIALKRFQSGKFGKLNKSIR------FPEILDLAPFMSGTSDKSPIY 716
Query: 384 NLVAVVIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKID 423
L AVV+H + GHY+ VK+ + W DD V ++
Sbjct: 717 RLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVE 759
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL + ++ + + L+ +PQ ++ E TWVH+IF G
Sbjct: 211 QEDSHEFLRYAVDALQKSCLAGQPQPQSRK-------------VEPKLAETTWVHKIFGG 257
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S KCL+C S + DL +DI +++ LR F + + L NK+KC+ C
Sbjct: 258 RLRSRVKCLSCGHNSDTFDSMLDLSIDIFGVSNLRDALRKFVAVDQLRGQNKYKCEKCKK 317
Query: 199 YQEA 202
+ A
Sbjct: 318 HVAA 321
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA 376
EKC K V PM+L +HLKRF M + K+ H V + + L + +
Sbjct: 313 EKCKKHVAADKQFTVHDAPMVLTIHLKRFSPMGR-----KIPHLVGYDERISLQPVMSEG 367
Query: 377 VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
+ Y L V+ H G GP+ GHY + VK + W +DD V + + + G+
Sbjct: 368 QH-GPTYTLFGVISHAGGGPSSGHYYAHVKDAAGQWHEMNDDTVSRQSGAPL----GM-- 420
Query: 436 DHQKSSETGYILFY 449
+ YILFY
Sbjct: 421 ------KNAYILFY 428
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 219 FPP-NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK-----KNKETLLSCL 272
+PP +R GL+N GNTC+ NS LQ L P RVL + + KN + +
Sbjct: 118 WPPQTKRGSGLINTGNTCFLNSALQCLLHTPPLL-RVLFQHGRGEPCEVPKNSFCMSCNM 176
Query: 273 ADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+L + T K ++ P L+ Q+D+HEFL + ++ + + C+ +
Sbjct: 177 RELAADSFTAKH---AMVPYTITRALQHIAKTMRRGRQEDSHEFLRYAVDALQKSCLAGQ 233
Query: 333 KLP 335
P
Sbjct: 234 PQP 236
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+LV
Sbjct: 520 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLV 577
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 578 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETV------------GKAKAYI 625
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 626 LFYVERQA 633
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 61/146 (41%), Gaps = 39/146 (26%)
Query: 74 FDNYMQQDAHEFLNFLINHIN------------EVILSERPQSNAKSKLSAPDGGGGDNH 121
F Y QQDAHEF+ +L++H++ VIL E +A +K N
Sbjct: 373 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCI-------NG 425
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------ 169
+S T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 426 AS------TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESG 479
Query: 170 --TSITQCLRGFSSTETLCSDNKFKC 193
++ CLR F+ E L + C
Sbjct: 480 PMCTLRDCLRSFTDLEELDETELYMC 505
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 280 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 339
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 340 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 393
>gi|242049526|ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + ++DAHEFL + I+ + + E + N +L+ EE T VH
Sbjct: 432 FGHGAEEDAHEFLRYAIDKMQSASIKE-AKKNGIQQLA---------------EETTLVH 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFK 192
IF G L S+ KC C+ S + E DL V+I + ++ LR F+S+E L DN++
Sbjct: 476 FIFGGYLRSKIKCTKCQVSSKQSERILDLTVEIDGDINTLDGALRRFTSSEVLDGDNRYH 535
Query: 193 CDNCASYQEAQ-------GPNI 207
C C SY+ AQ PNI
Sbjct: 536 CSRCNSYERAQKKLTILEAPNI 557
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N VLQ L F +P +LE + ++N E C + H K
Sbjct: 354 FGLYNLGNSCYANVVLQCLAFTRPLTAYLLEGHHSQNCSKNEWCFMCELEKVLIEGKHGK 413
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ ++P + L + F + ++DAHEFL + I+ + +K K
Sbjct: 414 SL--VSPTGILCHLNEIGVSFGHGAEEDAHEFLRYAIDKMQSASIKEAK 460
>gi|413926008|gb|AFW65940.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 489
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ H +E T + ++F G
Sbjct: 39 QEDAHEFLRHLVMSMQAACL---------------DGLGGEKHVEPSLQETTLIQQMFGG 83
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L DN +KC +CA
Sbjct: 84 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGSCA 143
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 144 AYVKAR 149
>gi|190408530|gb|EDV11795.1| ubiquitin carboxyl-terminal hydrolase 15 [Saccharomyces cerevisiae
RM11-1a]
Length = 1165
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
Y G N G TCY NS+LQ+ +F K FR V E +++ ++ L F+ +
Sbjct: 212 YVGFRNQGATCYLNSLLQSYFFTKYFRKLVYEIPTEHESPNNSVPLALQRAFYQLQVSDI 271
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI--------NEKCMKVKKLPM 336
+ ++ +TR D ++ Q D E +N + +K + + P
Sbjct: 272 PLDTLE----LTR-SFGWDTAKSFTQHDVWELMNGENQYAAQDYGLQDAQKGVIFESFPP 326
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD--------DAVNPDR---MYNL 385
+L L LKRF+Y ++ VKV+ + FP + L D D+ N D+ +YNL
Sbjct: 327 VLHLQLKRFEYDFNYDQMVKVNDKYEFPETIDLSPFVDKDVLKKTLDSENKDKNPYVYNL 386
Query: 386 VAVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTI 427
V++H G + GHY +++K D W FDD+ V ++ + +
Sbjct: 387 HGVLVHSGD-ISTGHYYTLIKPGVEDQWYRFDDERVWRVTKKQV 429
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ +E T + IF G
Sbjct: 261 QEDAHEFMRFSIDAMQSVCLDEF---------------GGEKVVPPRNQETTLIQHIFGG 305
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L SE C CE S++ E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 306 HLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCK 365
Query: 198 SYQEA-------QGPNI 207
Y +A Q PNI
Sbjct: 366 GYVKAWKRLTVKQAPNI 382
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
FPP GL+N GN+C++N VLQ L F +P +LE K +++ L + +
Sbjct: 175 FPP----CGLLNCGNSCFANVVLQCLSFTRPLIAFLLE-KGHHRECCHNDWCFLCEFETH 229
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ + + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 230 VEKVRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFMRFSIDAMQSVCL 280
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 23/126 (18%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ VK+ P IL + LKRF+ R K++ RV FP L L + + +Y L AV
Sbjct: 374 LTVKQAPNILTIALKRFQ----SGRFGKLNKRVTFPETLDLSPYMSEVGDGSDIYKLYAV 429
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHYI +K DF W DD V ++ +E+ S+
Sbjct: 430 VVHIDMLNASFFGHYICYIK--DFCGNWYRIDDWKVSSVE---LEEVL---------SQG 475
Query: 444 GYILFY 449
Y+L Y
Sbjct: 476 AYMLLY 481
>gi|212534318|ref|XP_002147315.1| ubiquitin hydrolase Ubp8, putative [Talaromyces marneffei ATCC
18224]
gi|210069714|gb|EEA23804.1| ubiquitin hydrolase Ubp8, putative [Talaromyces marneffei ATCC
18224]
Length = 507
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 272 LADLFHNIATHKKKV-------GSIAPKK---FITRLRKEKDEFDNYMQQDAHEFLNFLI 321
L +L ++ H KK GS+ P + + E+ + Y Q H + + L
Sbjct: 321 LLELSLDVQLHSKKRQMNGKLHGSVTPTLAGCLQSWVTPEELIMEGYQCQGCHSYPDKLT 380
Query: 322 NHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL-----FHLSDDA 376
K +++K+LP +L + +KRF+ D R K+ ++ FPLE+ + S A
Sbjct: 381 -----KQLRIKQLPAMLCMQMKRFEQTDSETR--KMQGKIDFPLEINMQPYTVASGSKKA 433
Query: 377 VNPDR----MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFG 432
R MY+L + ++H G+G N GHYI+ ++ D W LF+DD V + + +
Sbjct: 434 PATKRNDMFMYDLASAIVHDGAGLNEGHYIAYIQQGDRWCLFNDDKVTLVSEGDV----- 488
Query: 433 LTSDHQKSSETGYILFYQSR 452
L +D Y+LFY R
Sbjct: 489 LNAD-------AYLLFYTLR 501
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL + I+ + V L E G N S S EE + +
Sbjct: 727 LGNGKEEDAHEFLRYAIDAMQSVCLKE----------------AGVNASGSLEEETSLIG 770
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C S + E DL V+I+ + ++ + L F+STE L +NK++
Sbjct: 771 LTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQ 830
Query: 193 CDNCASYQEA-------QGPNI 207
C C SY++A + PNI
Sbjct: 831 CSRCKSYEKAKKKLTVSEAPNI 852
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GN+CY+N+VLQ L F P L+ +K+ KE +C + I
Sbjct: 647 RPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESL--ILKA 704
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
K+ ++P ++++R N ++DAHEFL + I+ + C+K
Sbjct: 705 KEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK 752
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 326 EKCMKVKKLPMILALHLKRFKY--MDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+K + V + P IL + LKRF+ K+N+ ++ FP L L + +Y
Sbjct: 841 KKKLTVSEAPNILTIALKRFQSGKFGKLNKSIR------FPEILDLAPFMSGTSDKSPIY 894
Query: 384 NLVAVVIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKID 423
L AVV+H + GHY+ VK+ + W DD V ++
Sbjct: 895 RLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVE 937
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL + I+ + V L E G N S S EE + +
Sbjct: 739 LGNGKEEDAHEFLRYAIDAMQSVCLKE----------------AGVNASGSLEEETSLIG 782
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C S + E DL V+I+ + ++ + L F+STE L +NK++
Sbjct: 783 LTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDGENKYQ 842
Query: 193 CDNCASYQEA-------QGPNI 207
C C SY++A + PNI
Sbjct: 843 CSRCKSYEKAKKKLTVSEAPNI 864
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GN+CY+N+VLQ L F P L+ +K+ KE +C + I
Sbjct: 659 RPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESL--ILKA 716
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
K+ ++P ++++R N ++DAHEFL + I+ + C+K
Sbjct: 717 KEGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLK 764
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 326 EKCMKVKKLPMILALHLKRFKY--MDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+K + V + P IL + LKRF+ K+N+ ++ FP L L + +Y
Sbjct: 853 KKKLTVSEAPNILTIALKRFQSGKFGKLNKSIR------FPEILDLAPFMSGTSDKSPIY 906
Query: 384 NLVAVVIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKID 423
L AVV+H + GHY+ VK+ + W DD V ++
Sbjct: 907 RLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVE 949
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F +Y QQDAHEF L++ + +L + + + +E T +H
Sbjct: 192 FRHYQQQDAHEFFICLLDAMQTALLGDYKNLDLR------------------VQETTVLH 233
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
IF G L S+ +C+ C+ S+ E FFDL +DIK S+T+ L+ F + E L N + C
Sbjct: 234 HIFGGYLRSQIQCVRCKHCSNTFESFFDLSIDIKAANSLTRALQQFVTKELLFKTNSYSC 293
Query: 194 DNC 196
C
Sbjct: 294 SGC 296
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM---- 382
K + + +LP +L + LKRF +M K+ H+V +P++L + ++
Sbjct: 304 KQLTIHRLPNVLCIQLKRFSFMSHFGS--KLRHKVSYPMQLNVHEFLSRSIRSRISRGAC 361
Query: 383 -YNLVAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
Y L V++H G+ + GHYI+ V++ + W DDD V + +++
Sbjct: 362 RYELYGVLVHLGATLSSGHYIAYVRAANGMWYCADDDDVR------------FSKENEVL 409
Query: 441 SETGYILFYQSRD 453
++ Y+LFY D
Sbjct: 410 NQAAYMLFYTRTD 422
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC--LADL-FH 277
P GL N GNTC+ N+ LQ L + + L + + + L +L H
Sbjct: 107 PRPMGAGLGNLGNTCFLNATLQCLAYTPALANFCLSGQYQRTHTPQPGFDAMKLVELHVH 166
Query: 278 NIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
T K+ ++ PK I LR+ F +Y QQDAHEF L++ +
Sbjct: 167 RSLTSPKR--TVLPKGIINHLRQINKAFRHYQQQDAHEFFICLLDAM 211
>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 734
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ +E T + IF G
Sbjct: 253 QEDAHEFIRFAIDAMQSVCLDEF---------------GGEKVVPPKHQETTLIQHIFGG 297
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L SE C CE S++ E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 298 HLQSEVICTECEKNSNQYENMMDLNVEIHGDAASLEECLDQFTAKEWLHGDNMYKCDGCK 357
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 358 GYVKAWKRLTVKRAPNI 374
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLAD--LF 276
FPP GL N GN+C++N VLQ L F +P +LE + C +D
Sbjct: 167 FPP----CGLKNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHGE-------CCHSDWCFL 215
Query: 277 HNIATHKKKV----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
TH +KV + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 216 CEFETHVEKVRLSSQAFSPMNILSRLPNISGTLGYGRQEDAHEFIRFAIDAMQSVCL 272
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ VK+ P IL + LKRF+ R K++ RV FP L L +A + +Y L AV
Sbjct: 366 LTVKRAPNILTIALKRFQ----SGRFGKLNKRVTFPETLDLSPYMSEAGDGSDIYKLYAV 421
Query: 389 VIHCG--SGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+H + GHYI +K W DD V ++ +E+ S+ Y
Sbjct: 422 VVHIDMLNASFFGHYICFIKDLCGNWYRIDDWKVSSVE---LEEVL---------SQGAY 469
Query: 446 ILFY 449
+L Y
Sbjct: 470 MLLY 473
>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 632
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ F+E T + IF G
Sbjct: 258 QEDAHEFMRFAIDTMQSVCLDEY---------------GGEKAVDPAFQETTLIQHIFGG 302
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I ++ S+ CL F+ E L +N ++CD C
Sbjct: 303 HLQSQVICTKCNKISNQLENMMDLTVEIHGDSGSLEDCLEQFTDREQLHGENMYRCDGCN 362
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 363 DYVKAWKRLTIRRAPNI 379
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
FPP GL+N GN+C++N VLQ L F +P +LE + ++ + L + +
Sbjct: 172 FPP----CGLLNCGNSCFANVVLQCLTFTRPLVAYLLE-EGHQRECRRNDWCFLCEFQVH 226
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ K +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 227 VERASKSSHPFSPMSILSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCL 277
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 23/126 (18%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P IL + LKRF+ R K++ RV FP L L + + + +Y L AV
Sbjct: 371 LTIRRAPNILTIALKRFQ----SGRFGKLNKRVAFPESLDLSPYTSEGGDGTDVYRLYAV 426
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHYI +K DF W DD V ++ +E+ S+
Sbjct: 427 VVHVDMLNASFFGHYICYIK--DFCGNWYRVDDCKVRSVE---LEEVL---------SQG 472
Query: 444 GYILFY 449
Y+L Y
Sbjct: 473 AYMLLY 478
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + + P+ +Y+L
Sbjct: 315 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLA 372
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 373 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 420
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 421 LFYVERQA 428
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA N+
Sbjct: 168 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQEN--STLSA-------NNKCCI 218
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 219 NGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCS 278
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 279 LRDCLRSFTDLEELDETELYMC 300
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 75 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 134
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 135 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 188
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + + P+ +Y+L
Sbjct: 382 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLA 439
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 440 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 487
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 488 LFYVERQA 495
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA N+
Sbjct: 235 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVPRSSILQEN--STLSA-------NNKCCI 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 NGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVCS 345
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 346 LRDCLRSFTDLEELDETELYMC 367
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 142 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 201
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 202 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 255
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ ++ + ++ L E GG+ + +E T + IF G
Sbjct: 197 QEDAHEFMRLAVDCMQKICLDE---------------AGGETTLDARTQETTLIQHIFGG 241
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C+ S+ E+ DL V I+ N S+ L+ F+S E L DNK++CD C
Sbjct: 242 YLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEWLDGDNKYRCDRCN 301
Query: 198 SYQEA-------QGPNI 207
+Y A + PNI
Sbjct: 302 AYVRAKKRLSVHEAPNI 318
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+CY+N VLQ L +P +L + +E + +L ++
Sbjct: 115 GLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACQREGWCF-MCELEDHVQKAFNNQ 173
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P K ++RLR + Q+DAHEF+ ++ + + C+
Sbjct: 174 MPFSPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICL 216
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V + P IL + LKRF+ + K++ +V FP EL + V+ Y L AV
Sbjct: 310 LSVHEAPNILTIALKRFQ----GGKFGKINKKVTFPEELDMVPYMSGTVDTPPAYKLYAV 365
Query: 389 VIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+H + GHY+ V++ + W DD V ++DQ + S+ Y
Sbjct: 366 VVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVDQIRV------------MSQKAY 413
Query: 446 ILFYQ 450
+L Y+
Sbjct: 414 MLLYR 418
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEF+ F+I + +V LS+ P+ G NH + T + IF G
Sbjct: 318 QEDSHEFIRFMIESLQKVSLSKYPK-------------GSINHRDA---MTTVIGSIFGG 361
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ KC C+ S+ + F DL VDI Q S+T+ L F +E L NK+KC C
Sbjct: 362 YLRSQVKCSQCQYESNTYDPFMDLCVDINQADSLTKGLTNFVKSELLDGSNKYKCSKCKK 421
Query: 199 YQEAQ 203
+AQ
Sbjct: 422 LVKAQ 426
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 30/155 (19%)
Query: 327 KCMKVKKL------------PMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD 374
KC K KKL P IL +KRF ++ K++ ++ F L L
Sbjct: 415 KCSKCKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYGG--KINRQIQFDQSLNLSPFMT 472
Query: 375 DAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGL 433
+ N +Y+L AV++H G + GHY VK S+ W DD V ++ +T+
Sbjct: 473 QS-NNHSIYDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTV------ 525
Query: 434 TSDHQKSSETGYILFYQSRDSTDARTMNSNDCRVN 468
S+ Y+LFY R+ +++N+N +N
Sbjct: 526 ------LSQKAYMLFYSKRNID--QSINTNTVSIN 552
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLF--------HN 278
GL N GNTC+ NSVLQ L + P + ++ ++E C A F
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMM--------SREHSRQCQASGFCIFCSLETQV 286
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+ +HK SI PK+ + +RK F Q+D+HEF+ F+I
Sbjct: 287 LQSHKCGGKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMI 329
>gi|357148128|ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Q+DAHEFL I+ + V + E +S A +L+ EE T V
Sbjct: 530 FGPGKQEDAHEFLRHSIDAMQSVCMKEARKSGAH-RLA---------------EETTLVQ 573
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFK 192
IF G L S+ KC C S + E DL V+I + +S+ + L+ F+STE L +N+++
Sbjct: 574 LIFGGYLRSKIKCTRCHGSSEQSERMLDLTVEIDGDISSLEEALQRFTSTEVLDGNNRYQ 633
Query: 193 CDNCASYQEA-------QGPNI 207
C C SY+ A + PN+
Sbjct: 634 CTRCKSYERAKKKLTISEAPNV 655
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSCLADLFHNIATH 282
R FGL N GN+CY+N+VLQ L F +P L +KN NKE C + H
Sbjct: 450 RPFGLHNLGNSCYANAVLQCLMFTRPLTAYFLGGLHSKNCSNKEWCFMCEFEKLVVEGKH 509
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
K +++P ++ L + F Q+DAHEFL I+ + CMK
Sbjct: 510 GKT--ALSPTGILSHLHEIGSSFGPGKQEDAHEFLRHSIDAMQSVCMK 555
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K + + + P +L + LKR++ + K+S + FP L L + +Y+L
Sbjct: 644 KKKLTISEAPNVLTIALKRYQ----SGKFGKISKAIRFPETLNLSSYMSTTDDNSPVYSL 699
Query: 386 VAVVIH--CGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
VV+H + GHY+ VK +H W DD V + ++E+ S+
Sbjct: 700 YGVVVHHDVMNAAFSGHYVCYVKDTHGKWYKTDDSQVKSV---SLENVM---------SK 747
Query: 443 TGYILFY 449
Y+L Y
Sbjct: 748 CAYMLLY 754
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + K W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAKHEGRWFHFNDSTVTLADEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 31/151 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ CLR F+ E L + C C Q++
Sbjct: 364 LRDCLRSFTDLEELDETELYMCHKCRKKQKS 394
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|123409082|ref|XP_001303323.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121884693|gb|EAX90393.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 2238
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVV 389
K+ K P +L + L RF Y N+ +KV+ + +FP +L L L D + +Y+L V+
Sbjct: 1272 KITKPPTVLVIQLMRFTYNMSTNQRLKVNSKYLFPEKLDLSDLMSDQ-SEHVIYDLTGVL 1330
Query: 390 IHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
+H GS N GHY S V + D W+ ++D V + + S++ G K+SE+ Y++FY
Sbjct: 1331 VHIGSA-NGGHYYSYVNNRDNWICYNDSRVSRSNMSSVMKSTG----GGKNSESAYLIFY 1385
Query: 450 QSRDS 454
S
Sbjct: 1386 TKSTS 1390
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 217 DRFPPNER-YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADL 275
D P + R + GL N G TCY NS LQ LY + FRD +++ + K L L ++
Sbjct: 1091 DLIPEDVRVHAGLTNMGCTCYLNSTLQQLYNVQEFRDLLIKSSPEKK-----WLQKLKEV 1145
Query: 276 FHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
F + T + ++ P F+ + + Y QQDA EFL L++ IN
Sbjct: 1146 FTQLETSR---SAVNPSAFVKSWLWYGEHVNPYQQQDAVEFLQALLDDIN 1192
>gi|147838237|emb|CAN78307.1| hypothetical protein VITISV_005598 [Vitis vinifera]
Length = 494
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG H SS +E T + IF G
Sbjct: 297 QEDAHEFMRFAIDTMQSVCLDEF-------------GGEKSVHPSS--QETTLIQHIFGG 341
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I + S+ +CL F+ TE L +N +KCD C
Sbjct: 342 HLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCN 401
Query: 198 SYQEA-------QGPNI 207
Y +A PNI
Sbjct: 402 DYVKASKRLTVRHAPNI 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLF 276
FPP GL+N GN+C++N VLQ L + +P +LE ++ + ++N L C +
Sbjct: 211 FPP----CGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFL-CEFQVH 265
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
A+H +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 266 VERASHSPX--PFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCL 316
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ ++ + ++ L E GG+ + +E T + IF G
Sbjct: 166 QEDAHEFMRLAVDCMQKICLDE---------------AGGETTLDARTQETTLIQHIFGG 210
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C+ S+ E+ DL V I+ N S+ L+ F+S E L DNK++CD C
Sbjct: 211 YLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEWLDGDNKYRCDRCN 270
Query: 198 SYQEA-------QGPNI 207
+Y A + PNI
Sbjct: 271 AYVRAKKRLSVHEAPNI 287
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+CY+N VLQ L +P +L + +E + +L ++
Sbjct: 84 GLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACEREGWCF-MCELEDHVQKAFNNQ 142
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P K ++RLR + Q+DAHEF+ ++ + + C+
Sbjct: 143 MPFSPIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICL 185
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K + V + P IL + LKRF+ + K++ +V FP EL + V+ Y L
Sbjct: 276 KKRLSVHEAPNILTIALKRFQ----GGKFGKINKKVTFPEELDMVPYMSGTVDTPPAYEL 331
Query: 386 VAVVIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDK 421
AVV+H + GHY+ V++ + W DD V +
Sbjct: 332 YAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVSR 370
>gi|194697876|gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 67 DLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF 126
D+ SS F Q+DAHEFL + I+ + V + E + GG S+
Sbjct: 55 DIGSS--FGPGKQEDAHEFLRYAIDAMQSVCMKEARK-------------GGVLQSA--- 96
Query: 127 EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETL 185
EE T V IF G L S+ KC C S + E DL V+I + +S+ + L F+STE L
Sbjct: 97 EETTLVQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVL 156
Query: 186 CSDNKFKCDNCASYQEA-------QGPNI 207
+NK+ C C SY+ A + PNI
Sbjct: 157 DGENKYHCSRCKSYERAKKKLTIEEAPNI 185
>gi|391344661|ref|XP_003746614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like
[Metaseiulus occidentalis]
Length = 918
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYN 384
K +K P IL L LKRF + R +K++ RV FP L+L F + + +Y+
Sbjct: 197 KGLKFVSFPKILTLQLKRFDFDYLTMRRIKLNDRVEFPEVLDLNGF-IESKPPKTEYVYD 255
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGL-----TSDHQK 439
L AV+IH GS N GHY + +++ W F+D+ V ++ ++ FG T
Sbjct: 256 LFAVLIHSGSA-NGGHYYAYIRNKTDWFCFNDNQVHRVTLEDVQRTFGGGGSTDTRSPFS 314
Query: 440 SSETGYILFYQSRDSTDARTMNSND 464
SS Y+L Y+ + +A+ M +D
Sbjct: 315 SSTNAYMLIYRQQSEANAQAMTEDD 339
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI------KQNTSITQCLRGFSSTETL 185
+ ++QG L KC C S++++ + D+ + + K S+ + L GF ETL
Sbjct: 119 IERLYQGSLKDYVKCTECNNESAREDHYQDIALVVRPFGSDKIYGSLIEALNGFVEPETL 178
Query: 186 CSDNKFKCDNC 196
N++ C+ C
Sbjct: 179 NGANQYHCEKC 189
>gi|444727116|gb|ELW67621.1| Ubiquitin carboxyl-terminal hydrolase 7 [Tupaia chinensis]
Length = 1199
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 37/253 (14%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
Y GL N G TCY NS+LQ L+F R ++L+ +NK + + LF K
Sbjct: 512 YVGLKNQGATCYMNSLLQTLFFTNQLR-KLLD-NVENKMKGTCVEGTIPKLFRG-----K 564
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHE-----FLNFL-INHIN------------- 325
V I K+ R + +D +D + + F++++ + ++
Sbjct: 565 MVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQ 624
Query: 326 --EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNPDR 381
EK +K LP +L L L RF Y + ++++K++ R FP +L L F D +P
Sbjct: 625 EAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKTDPKDPAN 684
Query: 382 MYNLVAVVIHCGSGPNRGHYISIV--KSHDFWLLFDDDVVDK-IDQSTIEDFFGLTSD-- 436
Y L AV++H G + GHY+ + K W FDDDVV + + IE +G D
Sbjct: 685 -YILHAVLVHSGDN-HGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDDDL 742
Query: 437 HQKSSETGYILFY 449
+ Y+L Y
Sbjct: 743 SVRHCTNAYMLVY 755
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
+ ++F+G + S +C + S + ED++D+Q+ IK +I + + + E L DNK+
Sbjct: 557 IPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKY 616
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F Q+DAHEFL ++I+ + L + KL G DN G +
Sbjct: 98 AEHFRLGRQEDAHEFLRYVIDACHNTCLRLK-------KLRRK--GNNDN----GPSTTS 144
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
V +IF G L S+ KCL+C S+K ++ D+ +D+ S+ Q L+ F E L +NK
Sbjct: 145 VVKDIFGGALQSQVKCLSCGAESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNK 204
Query: 191 FKCDNCASYQEA-------QGPNISALE 211
+KCDNC A Q PN+ ++
Sbjct: 205 YKCDNCKKLVSARKQMSILQAPNVLVIQ 232
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 30/130 (23%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-------KAKNKKN-------- 264
PP GL N GN+CY NSVLQ L + P + L + A ++K
Sbjct: 16 PP----LGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECPFCILE 71
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K + S DL + AP K + LR + F Q+DAHEFL ++I+
Sbjct: 72 KRIVRSLSMDLTQD-----------APSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDAC 120
Query: 325 NEKCMKVKKL 334
+ C+++KKL
Sbjct: 121 HNTCLRLKKL 130
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P +L + LKRF+ Y K+++ + V L + S D+ +P+ YN
Sbjct: 218 KQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEE--VLVLSSYMNKASQDS-HPE--YN 272
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L A ++H G P GHY + +K + W +D V ST++ SE
Sbjct: 273 LFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYV---SLSTLQGVL---------SEK 320
Query: 444 GYILFYQSRDSTDAR 458
YILF+ T+AR
Sbjct: 321 VYILFF---SRTNAR 332
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPDSCLYDLA 435
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 436 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 483
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 484 LFYVERQA 491
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 231 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSTILQEN--SALSASNKCCINGAS--- 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 341
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 342 LRDCLRSFTDLEELDETELYMC 363
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 197
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 251
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL F ++ + + L G + SS T +H+IF G
Sbjct: 190 QEDAHEFLRFTVDAMQQACL---------------HGCTILDRSSQAT---TIIHQIFGG 231
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS E F D+ +DIK +S+T+ L F E L +N +KC C
Sbjct: 232 FLRSRVKCLNCKAVSDTYEAFLDIPLDIKTVSSVTKALEQFVKPEQLDGENCYKCSKC 289
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L + P + +L + N + + + TH +V
Sbjct: 107 GLFNLGNTCFINSALQCLTYTPPLANYMLSLEHTQSCNYQGFC-----MMCTMETHINRV 161
Query: 287 -----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+I P + L++ F Q+DAHEFL F ++ + + C+
Sbjct: 162 LCCAHDAIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACL 209
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 59/141 (41%), Gaps = 33/141 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFHL 372
KC K KK+ P +L + LKRF K+N+ VK +P L L
Sbjct: 285 KCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKINKEVK------YPEYLDLRAY 338
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFF 431
++ +Y L AV++H G + GHY +K+ D W +D V QS I+
Sbjct: 339 MSQSIGEPLIYALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASV---VQSNIKTVL 395
Query: 432 GLTSDHQKSSETGYILFYQSR 452
G + Y+LFY R
Sbjct: 396 G---------QQAYLLFYIRR 407
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F Q+DAHEFL ++I+ + L + KL G DN G +
Sbjct: 102 AEHFRLGRQEDAHEFLRYVIDACHNTCLRLK-------KLRRK--GNNDN----GPSTTS 148
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
V +IF G L S+ KCL+C S+K ++ D+ +D+ S+ Q L+ F E L +NK
Sbjct: 149 VVKDIFGGALQSQVKCLSCGAESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNK 208
Query: 191 FKCDNCASYQEA-------QGPNISALE 211
+KCDNC A Q PN+ ++
Sbjct: 209 YKCDNCKKLVSARKQMSILQAPNVLVIQ 236
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 30/130 (23%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY-------KAKNKKN-------- 264
PP GL N GN+CY NSVLQ L + P + L + A ++K
Sbjct: 20 PP----LGLKNLGNSCYLNSVLQCLTYTPPLANFCLNHLHSSLCDSAVDRKRECPFCILE 75
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
K + S DL + AP K + LR + F Q+DAHEFL ++I+
Sbjct: 76 KRIVRSLSMDLTQD-----------APSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDAC 124
Query: 325 NEKCMKVKKL 334
+ C+++KKL
Sbjct: 125 HNTCLRLKKL 134
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P +L + LKRF+ Y K+++ + V L + S D+ +P+ YN
Sbjct: 222 KQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEE--VLVLSSYMNKASQDS-HPE--YN 276
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L A ++H G P GHY + +K + W +D V ST++ SE
Sbjct: 277 LFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYV---SLSTLQGVL---------SEK 324
Query: 444 GYILFYQSRDSTDAR 458
YILF+ T+AR
Sbjct: 325 VYILFF---SRTNAR 336
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ H +E T + ++F G
Sbjct: 520 QEDAHEFLRHLVMSMQAACL---------------DGLGGEKHVEPSLQETTLIQQMFGG 564
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L DN +KC C+
Sbjct: 565 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCS 624
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 625 AYVKAR 630
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDR-VLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY+N+VLQ L KP +L +K+ +K L C +L +T ++
Sbjct: 438 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWCLMC--ELEQYASTLRES 495
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 496 GGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACL 539
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNPDRMY 383
EK + + + P I A HLKRFK + N K+ + FPLEL L + + +++ N Y
Sbjct: 334 EKQLMLDQTPSIAAFHLKRFKTVGN-NAVEKIDKHINFPLELDLQPYTILNESDNASLKY 392
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L AVV+H G+ + GHY V++ D W DD +V K+ + T+ S+
Sbjct: 393 DLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTV------------LSQ 440
Query: 443 TGYILFY 449
YILFY
Sbjct: 441 EAYILFY 447
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 28/126 (22%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S +F + Q+DAHEF+ ++ + S FEE
Sbjct: 230 SSDFRRHQQEDAHEFMQCALDKLETCF--------------------------SNFEEDN 263
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
++F G L S+ +C NC S +E DL ++I+ SI+ L F+ E + D K
Sbjct: 264 IAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENVDSISSALESFTMVENI--DAK 321
Query: 191 FKCDNC 196
KC+ C
Sbjct: 322 LKCEGC 327
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS++Q P + +L + + + + + +
Sbjct: 155 GLANLGNTCFLNSIMQCFTHTVPLVEGLL-LSCHSPNDGHNGFCVICAFRYQMKQSLEST 213
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
G I+P F+ L++ +F + Q+DAHEF+ ++ + E C
Sbjct: 214 GRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKL-ETC 255
>gi|183229983|ref|XP_653583.2| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|169803097|gb|EAL48197.2| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|449710063|gb|EMD49205.1| ubiquitin carboxylterminal hydrolase domain containing protein
[Entamoeba histolytica KU27]
Length = 1477
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 321 INHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF--------HL 372
++ I C+K P L LHLKRF++ + + +K++ R FP EL L+ H
Sbjct: 478 VDAIRRTCIKTP--PNTLILHLKRFEFDYETLQRIKINDRYEFPRELDLYPYCIEHINHP 535
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK---SHDFWLLFDDDVVDKIDQSTIED 429
N D + LV V++H G+ + GHY S +K + D W F+DD++DK D +T+E+
Sbjct: 536 EKKDENGDYKFKLVGVLVHLGT-LDSGHYYSYIKDQETGDEWFSFNDDLIDKFDINTLEE 594
Query: 430 F-FGLTSDHQKSSETGYILFYQSRDST 455
FG + YILFYQ T
Sbjct: 595 SCFG--GGQYSKHYSAYILFYQKEKPT 619
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
+ GL N G TCY NS+ Q LY FR+ ++ KA + + LF + H+
Sbjct: 296 FVGLENLGCTCYINSLTQQLYMNPYFRNSIMNVKATDDT---PYIKTYQKLFTEL--HET 350
Query: 285 KVGSIAPKKFITRLRKEK-DEFDNYMQQDAHEFL 317
KV I ++++ L+ E E + Y+Q D HEFL
Sbjct: 351 KVRYINTDEYVSSLKGEDGKELNPYVQMDTHEFL 384
>gi|307102558|gb|EFN50829.1| hypothetical protein CHLNCDRAFT_55534 [Chlorella variabilis]
Length = 922
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH--LSDDAVNPDRMYN 384
K +++++LP +L L L RF D N H K+S V FP L++ L+ D+ Y+
Sbjct: 809 KVVRLQRLPPLLVLFLMRF---DPANLHQKISKPVAFPPRLKMNRTWLASDSGERGAEYD 865
Query: 385 LVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
LV+ V H G GHY + V+ WL FDDD VDK+ Q + LTS
Sbjct: 866 LVSTVTHHGKTIGSGHYTADVRQPCGAWLHFDDDRVDKVSQQQV-----LTSRP------ 914
Query: 444 GYILFYQ 450
Y+LFYQ
Sbjct: 915 -YLLFYQ 920
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL ++++ + + L N +KL D H+ + T V +IF G
Sbjct: 178 QEDAHEFLQYIVDGMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 219
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS E F D+ ++IK + S+ + L F E L +N +KC C
Sbjct: 220 YLRSRVKCLNCKGVSDTFEPFLDITLEIKASPSVNKALEQFVKPEQLDGENAYKCSKC 277
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIA-THKK 284
GL N GNTC++N+ LQ L + P + +L ++ ++ K + C A +H
Sbjct: 95 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTCHVKGFCMMCTMQAHITQALSHPG 154
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
V + P I + F Q+DAHEFL ++++ + + C+
Sbjct: 155 DV--LKPMSIINEMEDVATHFHFGSQEDAHEFLQYIVDGMQKACL 197
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 273 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANTTGG----KIAKDVKYPEYLDIRPY-M 327
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 328 SQQNGEPI-IYVLYAVLVHAGFNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 382
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 383 --------LSQQAYVLFY 392
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG H SS +E T + IF G
Sbjct: 279 QEDAHEFMRFAIDTMQSVCLDEF-------------GGEKSVHPSS--QETTLIQHIFGG 323
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I + S+ +CL F+ TE L +N +KCD C
Sbjct: 324 HLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCN 383
Query: 198 SYQEA-------QGPNI 207
Y +A PNI
Sbjct: 384 DYVKASKRLTVRHAPNI 400
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLF 276
FPP GL+N GN+C++N VLQ L + +P +LE ++ + ++N L C +
Sbjct: 193 FPP----CGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFL-CEFQVH 247
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
A+H + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 248 VERASHSPQ--PFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCL 298
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V+ P IL + LKRF+ R K++ RV FP L L AV +Y L AV
Sbjct: 392 LTVRHAPNILTIALKRFQS----GRFGKLNKRVTFPETLDLSPYMSKAVVGTDVYKLYAV 447
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHY+ K DF W DD V +++ ++D S+
Sbjct: 448 VVHLDMLNASFFGHYVCYTK--DFGGNWYRIDDCKVTRVE---LDDVL---------SQG 493
Query: 444 GYILFY 449
Y+L Y
Sbjct: 494 AYMLLY 499
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLFHLSDDAVNPDR-------- 381
+++LP +L LHLKRF++ + VKV + FPL L + H D ++ R
Sbjct: 383 IRRLPNVLCLHLKRFRWSTYL--RVKVDTHINFPLRGLEMNHFMLDNLHETRNSSASGSQ 440
Query: 382 -MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
Y+L AVV+H GSG GHY S W F+D V + D+ T+
Sbjct: 441 SKYDLAAVVVHHGSGAGSGHYTSYAVHEGGWYHFNDSSVTQCDEETVAKC---------- 490
Query: 441 SETGYILFYQSRD 453
YILFY RD
Sbjct: 491 --KAYILFYVRRD 501
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 64/143 (44%), Gaps = 22/143 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++ ++ +++ P NA + ++P G SS V
Sbjct: 243 FRGYQQQDAHEFMRYLLDRLHTELMTLIPY-NATVRPNSPYVGSPLGKSSV-------VT 294
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS--------------ITQCLRGF 179
IF GIL SE CL C S K + F D+ +DI + ++ CL F
Sbjct: 295 AIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLSSF 354
Query: 180 SSTETLCSDNKFKCDNCASYQEA 202
+ E L + C NC Q +
Sbjct: 355 TDVEELEDTELYMCANCKCRQRS 377
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)
Query: 224 RYFGLVNFGNTCYSNSVLQAL----YFCKPFRDRVLEYKAKNKKNKETLLSCLA--DLF- 276
R GL N GNTC+ N+VLQ+L FC + ++ + K K K T SC D+F
Sbjct: 150 RRSGLRNLGNTCFMNAVLQSLSNIQTFCG-YIQQLPSLEQKMSKKKITTRSCTEGNDVFV 208
Query: 277 ------HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
+A + +I+P+ + + K F Y QQDAHEF+ +L++ ++ + M
Sbjct: 209 VEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELMT 268
Query: 331 V 331
+
Sbjct: 269 L 269
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T++H+IF G
Sbjct: 195 QEDAHEFLRYTVDAMQKACL------NGSNKL--------DRHTQAT----TFIHQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KC+NC+ VS + + D+ ++IK SI + L F E L +N +KC C
Sbjct: 237 YLRSRVKCMNCKGVSDTFDPYLDITLEIKSAQSINKALEQFVKPEQLDGENAYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L + P + +L ++ +K E + + +I
Sbjct: 112 GLQNLGNTCFLNSALQCLTYTPPLANYMLSHE-HSKTCHEQGFCMMCTMQSHITQALSNS 170
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G+ I P I LR+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 GNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL 214
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTVHRASNVLTLSLKRFANFSGG----KITKEVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D V D T+ +
Sbjct: 345 SQPNGEPI-IYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLN-- 401
Query: 432 GLTSDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 402 ----------QQAYVLFY 409
>gi|401421583|ref|XP_003875280.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322491517|emb|CBZ26788.1| cysteine peptidase, Clan CA, family C19,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 646
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 69/138 (50%), Gaps = 13/138 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRV-------LEYKAKNKKNKETLLSCLADLF-- 276
GL N+GNTCY NSV+Q +Y C P R R+ L K K+ + T+L L L
Sbjct: 187 LGLENYGNTCYCNSVIQLIYHCAPLRLRLLELHHVYLTKKGKSGFEEGTVLFHLCSLIGA 246
Query: 277 ----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+N K + I PK + +R + + F+N MQQDAHEF FL+N I + ++
Sbjct: 247 MHKSNNRTKDKYQREKIVPKDLLNCVRAKNEVFNNDMQQDAHEFTMFLLNDIWDTEQRIM 306
Query: 333 KLPMILALHLKRFKYMDK 350
P + L LK M K
Sbjct: 307 ADPANVNLFLKHEASMKK 324
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 70/168 (41%), Gaps = 45/168 (26%)
Query: 74 FDNYMQQDAHEFLNFLINHI---NEVILSE--------RPQSNAKSKLSAP--------- 113
F+N MQQDAHEF FL+N I + I+++ + +++ K K S P
Sbjct: 279 FNNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLKHEASMKKKGSLPFSWKHSKDK 338
Query: 114 -------------------------DGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLN 148
GG + E T + I QG S T CL
Sbjct: 339 HISSHKENKLDKTTSAAATNSDAGTSGGKAVDAQQHFSRELTPLQVILQGQFGSLTACLE 398
Query: 149 CETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
CE V+++DE F DL ++ Q TS+ +CL F E NK +C+ C
Sbjct: 399 CENVTARDEVFMDLSLETAQGTSLLRCLDHFGDPEYFWGTNKLRCEEC 446
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-S 440
+ L V H G GPN GHY + V+ W FDD+ V + + ++ +FG+ SD
Sbjct: 574 FELTGFVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMAERDVKQYFGVPSDAVGVV 633
Query: 441 SETGYILFYQ 450
+ T YIL Y+
Sbjct: 634 TTTAYILLYE 643
>gi|332235096|ref|XP_003266741.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Nomascus leucogenys]
Length = 276
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 31/237 (13%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GNTCY N++LQ L P + L +Y + + + + A L ++
Sbjct: 45 GLRNLGNTCYMNAILQCLCSILPLVEYFLSGKYITALQNDCSEVAAAFAYLMTDMWLGDS 104
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK---------VKKLP 335
++ + F + L F QQDA EFL +++N ++E K + + P
Sbjct: 105 DC--VSSEIFRSALGNLYPAFTKKRQQDAQEFLIYVLNELHEALKKDIHFIKHVGISRAP 162
Query: 336 MILALHLKRFKYMDKMNRHVKVS-HRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGS 394
I+ HLKRF R ++ H + L+L + S P YNL AVV H G
Sbjct: 163 KIIIFHLKRFDIQGTTKRKLRTDIHYPLTNLDLTPYICSIFRKYPK--YNLCAVVNHFGD 220
Query: 395 GPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
+ GHY + K+ W FDD V +I +++++ T Y+LFY
Sbjct: 221 -LDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQN------------ATAYLLFY 264
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG H SS +E T + IF G
Sbjct: 203 QEDAHEFMRFAIDTMQSVCLDEF-------------GGEKSVHPSS--QETTLIQHIFGG 247
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I + S+ +CL F+ TE L +N +KCD C
Sbjct: 248 HLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKCDGCN 307
Query: 198 SYQEA-------QGPNI 207
Y +A PNI
Sbjct: 308 DYVKASKRLTVRHAPNI 324
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLF 276
FPP GL+N GN+C++N VLQ L + +P +LE ++ + ++N L C +
Sbjct: 117 FPP----CGLINCGNSCFANVVLQCLAYTRPLVAYLLEKGHRRQCRRNDWCFL-CEFQVH 171
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
A+H + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 172 VERASHSPQ--PFSPINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCL 222
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V+ P IL + LKRF+ R K++ RV FP L L AV +Y L AV
Sbjct: 316 LTVRHAPNILTIALKRFQ----SGRFGKLNKRVTFPETLDLSPYMSKAVVGTDVYKLYAV 371
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHY+ K DF W DD V +++ ++D S+
Sbjct: 372 VVHLDMLNASFFGHYVCYTK--DFGGNWYRIDDCKVTRVE---LDDVL---------SQG 417
Query: 444 GYILFY 449
Y+L Y
Sbjct: 418 AYMLLY 423
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E LC DN
Sbjct: 166 -IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGKC 230
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L E+ + L + L H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKLCAMEALVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSHILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L + L RF +K++R +V +P L+L+ + LS+ P
Sbjct: 238 KTLHVHIAPKVLMVVLNRFSAFTGNKLDR------KVSYPEFLDLKPY-LSEPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 290 YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 337
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY + + +++ + R+N
Sbjct: 338 ENAYVLFYVQQANLKQVSIDMPEGRIN 364
>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + I+ + V + E A GG EE T V IF G
Sbjct: 548 QEDAHEFLRYAIDAMQSVCMKE-----------ASKGG-----VIQSMEETTLVQLIFGG 591
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KC C S + E DL V+I + +S+ + L F+STE L +NK+ C C
Sbjct: 592 YLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLDEALERFTSTEVLDGENKYHCSRCK 651
Query: 198 SYQEAQ 203
SY+ A+
Sbjct: 652 SYERAK 657
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N+VLQ L F +P +LE +KN K C + I K+
Sbjct: 465 FGLHNVGNSCYANAVLQCLMFTRPLTTYLLEGLHSKNCSQKGWCFMCEFEKL--IVEGKR 522
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
+ +++P ++ L Q+DAHEFL + I+ + CMK
Sbjct: 523 RKTALSPTGILSHLHDIGSSLGPGKQEDAHEFLRYAIDAMQSVCMK 568
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ +E T + IF G
Sbjct: 267 QEDAHEFMRFSIDTMQSVCLDEF---------------GGEKAVPPNLQETTLIQHIFGG 311
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNCA 197
L SE C C+ +S++ E+ DL V+I + S+ +CL F++ E L +N +KC+ C
Sbjct: 312 RLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTAKERLDGENMYKCEGCK 371
Query: 198 SYQEA 202
Y +A
Sbjct: 372 DYVKA 376
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
FPP GL+N GN+C++N VLQ L F KP +LE K ++ L + ++
Sbjct: 181 FPP----CGLLNCGNSCFANVVLQCLSFTKPLVAYLLE-KGHRRECSCNDWCFLCEFENH 235
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ + + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 236 VERTRLSSQAFSPMNILSRLPNIGGTLGYGKQEDAHEFMRFSIDTMQSVCL 286
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 26/136 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ VK P IL + LKRF+ R K++ R+ FP L L +A + +Y L V
Sbjct: 380 LTVKCAPNILTIALKRFQ----SGRFGKLNKRIAFPETLNLSPYMSEAGDGSDIYKLYGV 435
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHYI +K DF W DD V ++ +E+ S+
Sbjct: 436 VVHIDMLNASFFGHYICYIK--DFQGNWYRIDDWKVMTVE---VEEVL---------SQG 481
Query: 444 GYILFYQSRDSTDART 459
Y+L Y SR S ART
Sbjct: 482 AYMLLY-SRCS--ART 494
>gi|297799550|ref|XP_002867659.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
gi|297313495|gb|EFH43918.1| ubiquitin-specific protease 16 [Arabidopsis lyrata subsp. lyrata]
Length = 1007
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 16/131 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL F+++ + V + S+ P SS E+ T +
Sbjct: 618 LGNGKEEDAHEFLRFVVDTMQSVCIK-------ASEYDMP--------KSSKLEDTTLIG 662
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C+ S E DL V+I + S + LR F+ TE L DNK++
Sbjct: 663 LTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGDNKYR 722
Query: 193 CDNCASYQEAQ 203
C +C SY+ A+
Sbjct: 723 CGSCKSYERAK 733
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 9/114 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEY---KAKNKKNKETLLSCLADLFHNIATHK 283
GL+N GN+C++N V Q L F P L+ +A KK + C F +
Sbjct: 541 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQLHSRACTKKEQ-----CFTCGFEKLVLKA 595
Query: 284 KKVGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
K+ S ++P +++L+ N ++DAHEFL F+++ + C+K + M
Sbjct: 596 KEGKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDM 649
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 20/127 (15%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +K+ P +L + LKRF+ + K++ + FP L L Y L
Sbjct: 733 KKKLKITDPPNVLTIALKRFQ----AGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKL 788
Query: 386 VAVVIHCG--SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V++H + GHY+ +++ + W DD V +TSD ++
Sbjct: 789 YGVIVHLDIMNAAFSGHYVCYIRNQNKWYKADDSTV-------------VTSDVERIMTK 835
Query: 444 G-YILFY 449
G Y+LFY
Sbjct: 836 GAYMLFY 842
>gi|62320711|dbj|BAD95379.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|227202736|dbj|BAH56841.1| AT2G24640 [Arabidopsis thaliana]
Length = 418
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE + F I+ + V L E GG+ +E T + IF G
Sbjct: 257 QEDAHELMRFAIDMMQSVCLDEF---------------GGEKVVPPRAQETTLIQYIFGG 301
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 302 LLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 198 SYQEA 202
Y +A
Sbjct: 362 DYVKA 366
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+C++N VLQ L + +P +LE +K + ++N L + +++
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCF---LCEFENHLDRANY 231
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHE + F I+ + C+
Sbjct: 232 SRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCL 276
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE + F I+ + V L E GG+ +E T + IF G
Sbjct: 257 QEDAHELMRFAIDMMQSVCLDEF---------------GGEKVVPPRAQETTLIQYIFGG 301
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 302 LLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 198 SYQEA 202
Y +A
Sbjct: 362 DYVKA 366
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+C++N VLQ L + +P +LE +K + ++N L C + + A + +
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFL-CEFENHLDRANYSR 233
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHE + F I+ + C+
Sbjct: 234 --FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCL 276
>gi|225449917|ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
vinifera]
gi|296081305|emb|CBI17749.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMYNL 385
K +K++KL I+ LHL RF Y D+ K+ V FPLEL L L R Y L
Sbjct: 439 KSVKIQKLSEIMILHLMRF-YYDENQGSTKLHKPVTFPLELVLGRELLVSPTTEGRKYEL 497
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA + H G P++GHY + + H WL FDD V+ + S + E
Sbjct: 498 VATITHHGRDPSKGHYTTDARHHSGHWLRFDDSAVNVVSTSKV------------LHEHP 545
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 546 YVLFYK 551
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 210 LEKEI-----GPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-KK 263
L+KEI GP N GL+N GN C+ N+ LQAL C PF + E + ++ K
Sbjct: 178 LKKEILKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELRIRDIPK 237
Query: 264 NKETLLSCLA------DLFHNIATHKKKVGSI------APKKFITRLRKEKDEFDNYM-- 309
L+ A D+ +++ KK + + +P F L+ + N +
Sbjct: 238 VGYPTLTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDVPNKISG 297
Query: 310 ---QQDAHEFLNFLINHINEKCMKVK 332
Q+DA EFL+F+++ ++++ +K++
Sbjct: 298 RPRQEDAQEFLSFVMDQMHDELLKLE 323
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ F L + + P+ +Y+L
Sbjct: 347 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLA 404
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V ++ T+ + YI
Sbjct: 405 AVVVHHGSGVGSGHYTAYATHKGRWFHFNDSTVTLTEEETV------------AKAKAYI 452
Query: 447 LFYQSR 452
LFY R
Sbjct: 453 LFYVER 458
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + E S + S LS + ++ T V
Sbjct: 200 FRGYQQQDAHEFMRYLLDHLHLELQGEFDGS-SHSVLSQANCSRSASNKCCINGASTVVT 258
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSITQCLRGF 179
+F G+L +E CL C T S K + F DL +DI ++ CLR F
Sbjct: 259 SVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSF 318
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 319 TDLEELDETELYTC 332
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 107 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 166
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 167 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 220
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ F L + + P+ +Y+L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLA 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V ++ T+ + YI
Sbjct: 460 AVVVHHGSGVGSGHYTAYATHKGRWFHFNDSTVTLTEEETV------------AKAKAYI 507
Query: 447 LFYQSR 452
LFY R
Sbjct: 508 LFYVER 513
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + E S + S LS + + T V
Sbjct: 255 FRGYQQQDAHEFMRYLLDHLHLELQGEFDGS-SHSVLSQANCSRSACNKCCINGASTVVT 313
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSITQCLRGF 179
+F G+L +E CL C T S K + F DL +DI ++ CLR F
Sbjct: 314 SVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSF 373
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 374 TDLEELDETELYTC 387
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 221
Query: 274 DLFHN--IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 222 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 275
>gi|326432136|gb|EGD77706.1| hypothetical protein PTSG_08799 [Salpingoeca sp. ATCC 50818]
Length = 1085
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL------EYKAKNKKNKETLLSCLA 273
P R GL+N GNTCY NS +QAL C P +D L + ++ TL+
Sbjct: 269 PVEARMVGLLNHGNTCYMNSAIQALLHCLPIQDFFLTCDGHVQQSQPRGGDRTTLVQQFR 328
Query: 274 DLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
L H IA K IAP +F+ +R F Y QQD EFL + ++ ++E+
Sbjct: 329 HLVHRIAFAKGAY--IAPSEFVRHVRSSNLLFQGYGQQDTVEFLRYALDKLDEE 380
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSHDF--WLLFDDDVVDKIDQSTIEDFFGLTSDH 437
D Y L AV+ H GS + GHYI + D WL ++D++V ++D+ST+ G+ +
Sbjct: 670 DSFYELTAVIQHMGSM-DYGHYICYARDVDTGEWLKYNDEIVTRVDESTV---LGVQA-- 723
Query: 438 QKSSETGYILFYQSR 452
Y+LFY+ R
Sbjct: 724 -------YVLFYRRR 731
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 20/98 (20%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSG---FEEPT 130
F Y QQD EFL + ++ ++E +LS P D S+ G ++ +
Sbjct: 358 FQGYGQQDTVEFLRYALDKLDE-------------ELSLPV----DESSTLGNTKAKKKS 400
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ 168
+ +F G + S +CL C S ++E F+DL + I Q
Sbjct: 401 VISSVFSGTVESRVECLTCHKSSVREESFYDLALQIPQ 438
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL 369
+++K + +K+ P +L L +KRFKY K R +K++ RV FP LRL
Sbjct: 528 LHQKHIHIKRQPEVLCLTIKRFKY--KYGRSIKINTRVEFPRVLRL 571
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 69 CSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE 128
C S F + Q+DAHE+L LI ++ L +SN S+ +E
Sbjct: 74 CISKSFRMWRQEDAHEYLRCLIEGLHNCCLPPGVKSN-----------------SAVSQE 116
Query: 129 PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
+ +H+IF G L S+ KC C T S+ + DL ++I + S+T+ L F++ E L D
Sbjct: 117 RSLIHKIFGGRLRSQVKCTVCLTCSNTYDPLLDLSLEIVRADSLTKALNRFTAVEALEGD 176
Query: 189 NKFKCDNC 196
NK+ C +C
Sbjct: 177 NKYHCSHC 184
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NSVLQ L + P + + K + A H
Sbjct: 1 GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQHKATCRAAGFCAMCALQEHVRQALASSG 60
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G+++P + LR F + Q+DAHE+L LI ++ C+
Sbjct: 61 GAVSPSTLVKNLRCISKSFRMWRQEDAHEYLRCLIEGLHNCCL 103
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 322 NHINEKCMKVK-----KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDD 375
+H N+K +K K P IL + KRF K+ ++ F L L ++S+
Sbjct: 182 SHCNKKVRALKQFTIDKPPNILTIQFKRFSSTGSSGG--KIDKKIEFGRTLDLKPYISNP 239
Query: 376 AV--NPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
V D Y+L AV++H G + GHY V++ D W DD V ++ + ++ D
Sbjct: 240 QVCSATDAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLD--- 296
Query: 433 LTSDHQKSSETGYILFYQSRDS 454
+ YILFY RDS
Sbjct: 297 ---------QKAYILFY-IRDS 308
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE + F I+ + V L E GG+ +E T + IF G
Sbjct: 87 QEDAHELMRFAIDMMQSVCLDEF---------------GGEKVVPPRAQETTLIQYIFGG 131
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 132 LLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCD 191
Query: 198 SYQEA 202
Y +A
Sbjct: 192 DYVKA 196
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+C++N VLQ L + +P +LE +K + ++N L C + + A + +
Sbjct: 5 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFL-CEFENHLDRANYSR 63
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHE + F I+ + C+
Sbjct: 64 --FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCL 106
>gi|453080713|gb|EMF08763.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 566
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 51/169 (30%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEI 135
Y QQDAHEFL F++N ++E E + +AK + VH+
Sbjct: 260 GYSQQDAHEFLGFILNSLHEANTEEEEKKDAK-------------------DCECVVHQT 300
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-----------------------TSI 172
F G++ S C C+TV+S E F DL +DIK +
Sbjct: 301 FAGMMRSTVTCSTCKTVNSTSEAFMDLSLDIKSAGVVVKKKKLALTGATQTVKEQLPVDL 360
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
T+CL +++ ETL SDN + C C +EA+ K++ R PP
Sbjct: 361 TECLDRYTTAETLSSDN-YTCRKCDGPKEAK--------KKLTLTRLPP 400
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSC-LADLFHNIATHKK 284
GL N G TC+ + +LQ+L R L E + +E SC L D+ + +K
Sbjct: 179 GLYNMGQTCFMSVILQSLIHNPFIRTYYLTEGHRSSDCEREACTSCALDDIITDFYGTEK 238
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
G A + K Y QQDAHEFL F++N ++E
Sbjct: 239 HEGYGAVH-MLQGCWKNGGNLAGYSQQDAHEFLGFILNSLHE 279
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 14/74 (18%)
Query: 377 VNPDR-MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
++PD+ +Y L +V++H G + GHYI K + W FDD +V ++D
Sbjct: 501 ISPDQPIYELSSVIVHKGK-IDSGHYICYCKQVEHWFRFDDSMVVQVD------------ 547
Query: 436 DHQKSSETGYILFY 449
D + + Y+LFY
Sbjct: 548 DKEVLNAEAYMLFY 561
>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ + I+ + V L E GG+ +E T + IF G
Sbjct: 251 QEDAHEFMRYAIDMMQSVCLDEF---------------GGEKIVPPRSQETTLIQYIFGG 295
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V++ + S+ +CL F++ E L DN +KCD C+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCS 355
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 356 DYVKACKRLTIRRAPNI 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N +LQ L + +P +LE K ++ L + ++ +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLE-KGHKRECMRNDWCFLCEFQTHVERASQSR 227
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHEF+ + I+ + C+
Sbjct: 228 FPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL 270
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P IL + LKR++ R+ K++ R+ FP L L + + +Y L AV
Sbjct: 364 LTIRRAPNILTIALKRYQ----GGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAV 419
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
++H + GHYI +K DF W DD ++ ++ +ED S+
Sbjct: 420 IVHLDMLNASFFGHYICYIK--DFCGNWYRIDDSEIESVE---LEDVL---------SQR 465
Query: 444 GYILFY---QSRDST 455
Y+L Y Q+R S+
Sbjct: 466 AYMLLYSRIQARSSS 480
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ + I+ + V L E GG+ +E T + IF G
Sbjct: 251 QEDAHEFMRYAIDMMQSVCLEEF---------------GGEKIVPPRSQETTLIQYIFGG 295
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V++ + S+ +CL F++ E L DN +KCD C+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAVSLEECLDQFTAEEWLHGDNMYKCDRCS 355
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 356 DYVKACKRLTIWRAPNI 372
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N +LQ L + +P +LE K +K + F TH ++
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLE-----KGHKRECMHNDWCFFCEFQTHVERA 223
Query: 287 GS----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
+P I+RL Q+DAHEF+ + I+ + C++
Sbjct: 224 SQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLE 271
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ + + P IL + LKR++ R+ K++ R+ FP L L + + +Y L AV
Sbjct: 364 LTIWRAPNILTIALKRYQ----GGRYGKLNKRISFPATLDLNPYMSEGGDGSDVYKLYAV 419
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
++H + GHYI +K DF W DD ++ ++ +ED S+
Sbjct: 420 IVHLDMLNASFFGHYICYIK--DFCGNWYRIDDSEIESVE---LEDVL---------SQR 465
Query: 444 GYILFY---QSRDST 455
Y+L Y Q+R S+
Sbjct: 466 AYMLLYSRIQARSSS 480
>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
Full=Ubiquitin thioesterase 18; AltName:
Full=Ubiquitin-specific-processing protease 18
gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
Length = 631
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ + I+ + V L E GG+ +E T + IF G
Sbjct: 251 QEDAHEFMRYAIDMMQSVCLDEF---------------GGEKIVPPRSQETTLIQYIFGG 295
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V++ + S+ +CL F++ E L DN +KCD C+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCS 355
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 356 DYVKACKRLTIRRAPNI 372
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N +LQ L + +P +LE K ++ L + ++ +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLE-KGHKRECMRNDWCFLCEFQTHVERASQSR 227
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHEF+ + I+ + C+
Sbjct: 228 FPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL 270
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P IL + LKR++ R+ K++ R+ FP L L + + +Y L AV
Sbjct: 364 LTIRRAPNILTIALKRYQ----GGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAV 419
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
++H + GHYI +K DF W DD ++ ++ +ED S+
Sbjct: 420 IVHLDMLNASFFGHYICYIK--DFCGNWYRIDDSEIESVE---LEDVL---------SQR 465
Query: 444 GYILFY---QSRDST 455
Y+L Y Q+R S+
Sbjct: 466 AYMLLYSRIQARSSS 480
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLRN--KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ + I+ + V L E GG+ +E T + IF G
Sbjct: 251 QEDAHEFMRYAIDMMQSVCLDEF---------------GGEKIVPPRSQETTLIQYIFGG 295
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V++ + S+ +CL F++ E L DN +KCD C+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCS 355
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 356 DYVKACKRLTIRRAPNI 372
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N +LQ L + +P +LE K ++ L + ++ +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLE-KGHKRECMRNDWCFLCEFQTHVERASQSR 227
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHEF+ + I+ + C+
Sbjct: 228 FPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL 270
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 26/135 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P IL + LKR++ R+ K++ R+ FP L L + + +Y L AV
Sbjct: 364 LTIRRAPNILTIALKRYQ----GGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAV 419
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
++H + HYI +K DF W DD ++ ++ +ED S+
Sbjct: 420 IVHLDMLNASFFSHYICYIK--DFCGNWYRIDDSEIESVE---LEDVL---------SQR 465
Query: 444 GYILFY---QSRDST 455
Y+L Y Q+R S+
Sbjct: 466 AYMLLYSRIQARSSS 480
>gi|440298687|gb|ELP91318.1| ubiquitin specific protease, putative [Entamoeba invadens IP1]
Length = 1188
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 80/141 (56%), Gaps = 17/141 (12%)
Query: 321 INHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAV-NP 379
++ + C+K P L LH+KRF++ + +K+++R FP EL LF S + + +P
Sbjct: 482 VDAVRRSCIKTP--PNTLILHIKRFEFDYETMDRIKLNNRYEFPRELDLFKYSAEFLKDP 539
Query: 380 ------DRMYNLVAVVIHCGSGPNRGHYISIVK---SHDFWLLFDDDVVDKIDQSTIED- 429
D + LV V+IH GS + GHY S +K + D W +F+DD+++K D S +E+
Sbjct: 540 TIENKGDFQFKLVGVLIHLGS-LDSGHYYSYIKDQETGDEWFVFNDDLIEKFDLSKLEEQ 598
Query: 430 FFGLTSDHQKSSETGYILFYQ 450
+G + + S+ YILFYQ
Sbjct: 599 TYGGDATKRFSA---YILFYQ 616
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 189 NKFKCDNCASYQEAQGPNISALEKEIGPD----RFPPNERYFGLVNFGNTCYSNSVLQAL 244
NK DNC + NI ++ D +FP + GL N G TCY NS++Q L
Sbjct: 271 NKELTDNCVN-------NIKPIQMARVTDATFKKFP----FVGLENQGCTCYINSLVQQL 319
Query: 245 YFCKPFRDRVLEYKA-KNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLR-KEK 302
Y FR+++L K +N N ++ LF + H+ V + K FI+ L+ +
Sbjct: 320 YMNPYFRNKLLNVKGNENSVN----INAFQKLFTEL--HETVVRYVDTKDFISHLKGDDG 373
Query: 303 DEFDNYMQQDAHEFLNFLINHINEKCMKV 331
E + Y+Q D HEFL ++ I ++ ++
Sbjct: 374 KELNPYIQMDTHEFLTSTLDEIEKELKQI 402
>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 24/142 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Q+DAHEFL + I+ + V + E + GG S+ EE T V
Sbjct: 538 FGPGKQEDAHEFLRYAIDAMQSVCMKEARK-------------GGVLQSA---EETTLVQ 581
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFK 192
IF G L S+ KC C S + E DL V+I + +S+ + L F+STE L +NK+
Sbjct: 582 LIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVLDGENKYH 641
Query: 193 CDNCASYQEA-------QGPNI 207
C C SY+ A + PNI
Sbjct: 642 CSRCKSYERAKKKLTIEEAPNI 663
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN-IATHKK 284
FGL N GN+CY+N+V Q L F +P +LE + KN C F I K+
Sbjct: 460 FGLHNLGNSCYANAVFQCLMFTRPLTTYLLE--GLHSKNCSQNGWCFMCEFEKLIVEGKR 517
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMIL 338
+ +++P ++ L F Q+DAHEFL + I+ + CMK + +L
Sbjct: 518 RKIALSPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVL 571
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 17/125 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL + I+ + + L+ P A++KL E TWVH+IF G
Sbjct: 94 QEDSHEFLRYAIDAMQKSCLAGFP-PKAEAKLG----------------EATWVHKIFGG 136
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S C NC+ S + DL +DI + S+ + LR F S + L +K+KC+ C
Sbjct: 137 RLRSRVSCQNCDHNSDTFDRILDLSLDIMRADSLKEALRSFISPDFLKGADKYKCEKCKK 196
Query: 199 YQEAQ 203
+ A+
Sbjct: 197 HVNAE 201
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 61/130 (46%), Gaps = 22/130 (16%)
Query: 323 HIN-EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPD 380
H+N EK + + P +L +HLKRF + + K+ H V++ L L ++S
Sbjct: 197 HVNAEKRFTIHEAPSVLTVHLKRFSPLGR-----KIGHHVIYDEHLNLQPYMSKGQYG-- 249
Query: 381 RMYNLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
Y+L V+ H G GPN GHY + VKS W +D++ I +
Sbjct: 250 FTYSLYGVICHAGGGPNSGHYFAFVKSRSGRWYEMNDEMASPISGPPV------------ 297
Query: 440 SSETGYILFY 449
S +T YILFY
Sbjct: 298 SKKTAYILFY 307
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-CLADLFHNIATHKKK 285
GL N GNTC+ NS LQ L P +V + NKE C+ F + K
Sbjct: 15 GLYNTGNTCFLNSALQCLLHTPPLLRQVFSH------NKEKCKPFCMVCAFRQVTVQAHK 68
Query: 286 -VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P RL+ Q+D+HEFL + I+ + + C+
Sbjct: 69 GSSPFSPSPVSGRLQTIAKHMRRGRQEDSHEFLRYAIDAMQKSCL 113
>gi|336268250|ref|XP_003348890.1| hypothetical protein SMAC_01914 [Sordaria macrospora k-hell]
Length = 1413
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ L + L ++AK + N E LS L +
Sbjct: 339 VGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINAENPLSHNGDVALAYMRLLDE 398
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ N A + S+AP+ F + + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 399 IYKNPAPN-----SVAPRHFKSIVGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 453
Query: 335 PMI 337
P I
Sbjct: 454 PYI 456
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLF-HLSDDAVNPDRMYNLVAVVI 390
K P IL +HLKRF + R K+ V FP+E L L + D +Y+L+AV
Sbjct: 1044 KTPDILVVHLKRFSSVGW--RRDKLDVLVDFPIEGLDLTERVIDKEDGKQEIYDLIAVDD 1101
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G G GHY + K+ D W F+D V K+ T + S Y+LF
Sbjct: 1102 HWG-GLGGGHYTAFAKNFLDDQWYEFNDSSVSKV-----------TDTSKVVSPAAYLLF 1149
Query: 449 YQSR 452
Y+ R
Sbjct: 1150 YRRR 1153
>gi|380094149|emb|CCC08366.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1414
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ L + L ++AK + N E LS L +
Sbjct: 340 VGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINAENPLSHNGDVALAYMRLLDE 399
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ N A + S+AP+ F + + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 400 IYKNPAPN-----SVAPRHFKSIVGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 454
Query: 335 PMI 337
P I
Sbjct: 455 PYI 457
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLF-HLSDDAVNPDRMYNLVAVVI 390
K P IL +HLKRF + R K+ V FP+E L L + D +Y+L+AV
Sbjct: 1045 KTPDILVVHLKRFSSVGW--RRDKLDVLVDFPIEGLDLTERVIDKEDGKQEIYDLIAVDD 1102
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G G GHY + K+ D W F+D V K+ T + S Y+LF
Sbjct: 1103 HWG-GLGGGHYTAFAKNFLDDQWYEFNDSSVSKV-----------TDTSKVVSPAAYLLF 1150
Query: 449 YQSR 452
Y+ R
Sbjct: 1151 YRRR 1154
>gi|410907043|ref|XP_003967001.1| PREDICTED: mitochondrial inner membrane protein OXA1L-like
[Takifugu rubripes]
Length = 664
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 101/210 (48%), Gaps = 17/210 (8%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHK 283
+Y GLVN G TCY NSVLQ L+ + F+ V + ++N + E + L LF ++ T
Sbjct: 5 KYHGLVNQGATCYLNSVLQVLFMTEDFKSAVERHSSEN-PDSECIDPELDALFQDLKTKT 63
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALHLK 343
+I K I R+ + +D + + + L+ ++ C+ VK P +L L LK
Sbjct: 64 ATTNNITWKLSIDRVNEPRDAAEYF-----EKILHLASPAASKDCV-VKVHPDVLLLLLK 117
Query: 344 RFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYIS 403
RF+ +VK + V PL L++ A N + Y L A V H G G GHY +
Sbjct: 118 RFELDYSSMTYVKNNCTVDVPLSLQI-----PAAN--QTYELYAAVKHFG-GLRNGHYTA 169
Query: 404 IVKSHDFWLLFDDDVVDK--IDQSTIEDFF 431
+K + W FDD V + + +S + F
Sbjct: 170 TIKDGEEWYSFDDSRVTQRSLQRSQLHTLF 199
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHYI+ W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYIAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 461
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 462 LFYVEHQAKAGSD 474
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 263
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 264 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 319
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 320 LRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N ++ L G E+ + +H
Sbjct: 184 FHKHRQEDAHEFLLFTLNAMHTSCLP------------------GSKLLGCTSEQSSLIH 225
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
EIF G S+ KCL+C + E F D+ +DI+ S+ Q L E LC +N + C
Sbjct: 226 EIFGGSWKSQIKCLHCNETTDLLEPFLDITLDIQTAQSVNQALENLVMEEQLCGENAYHC 285
Query: 194 DNC 196
DNC
Sbjct: 286 DNC 288
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+ K + VK P +L L L RF + KVS+ F + ++S P Y
Sbjct: 293 MASKTLTVKDAPKVLLLVLNRFSEFTGDKKDRKVSYPESFDFQP---YISQSHRQP-LFY 348
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L AV++H G + GHY VK+ + W DD V + D +++ SE
Sbjct: 349 SLYAVLVHDGVTCHSGHYFCYVKAGNGHWYKMDDSSVTRCDVNSV------------LSE 396
Query: 443 TGYILFYQSRDSTDART 459
Y+LFY + TD RT
Sbjct: 397 PAYVLFYVQQ--TDLRT 411
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNI 279
P++ GL N GN+CY N+VLQ L P + +L + ++N ++ + C + H
Sbjct: 106 PHDVGAGLENTGNSCYMNAVLQCLTHTPPLVNYMLSREHSQNCCHQGDCMICAMEA-HVT 164
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
+ I P + +T F + Q+DAHEFL F +N ++ C+ KL
Sbjct: 165 RSLLYSGDVIQPSEKLTA------AFHKHRQEDAHEFLLFTLNAMHTSCLPGSKL 213
>gi|149042015|gb|EDL95856.1| rCG58374 [Rattus norvegicus]
Length = 471
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 351 IQKLPKALCLHLKRFHWTAYLRN--KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLA 408
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 409 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 456
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 457 LFYVERQA 464
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQC 175
T V IF GIL +E CL C T S K + F DL +DI S+ C
Sbjct: 259 TVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDC 318
Query: 176 LRGFSSTETL 185
LR F+ E L
Sbjct: 319 LRSFTDLEEL 328
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEF F+I+ + +V LS+ P K +S D T + IF G
Sbjct: 198 QEDSHEFFCFVIDSLQKVCLSKFP----KGTISPRDS------------MTTIIGSIFGG 241
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ KC C+ S+K ++F DL +DI Q S+T+ L+ F E L +N +KC C
Sbjct: 242 YLRSQLKCSVCQYESNKFDEFMDLSIDINQADSLTKGLQNFVKPEILDGENGYKCAKCKK 301
Query: 199 YQEAQGPNISALEKEIGP 216
+A+ +L+ EI P
Sbjct: 302 LVKAE----KSLQIEISP 315
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMD----KMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR 381
EK ++++ P IL + +KRF ++D K N+H++ L+L + N
Sbjct: 306 EKSLQIEISPPILTVQIKRFSFLDSYGGKDNKHIQFGQ----TLDLSPYM---TQTNDHS 358
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
+Y+L AV++H G N GHY VK ++ W DD +V ++ ++
Sbjct: 359 IYDLYAVLVHLGDSTNSGHYYCYVKGTNGVWYKMDDSMVSQVSLKSV------------L 406
Query: 441 SETGYILFYQSRDSTDARTMNSN 463
Y+LFY RD+ + N+N
Sbjct: 407 RSKAYMLFYSKRDTVKSINTNTN 429
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSC-LADLFHNIATHKK 284
GL N GNTC+ NS++Q L + + ++ + +KN NK + C L D H I +H++
Sbjct: 115 GLYNIGNTCFMNSIIQCLTYSSTLANYMISREHSKNCTNKSFCIFCSLED--HIIISHRE 172
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
SI P + K F Q+D+HEF F+I+ + + C+
Sbjct: 173 TGKSITPIVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL 217
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
++DAHEFL + I+ + V L E G N S EE T + F G
Sbjct: 606 EEDAHEFLRYAIDTMQSVCLKE----------------AGVNALGSFEEETTLIGLTFGG 649
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KC+ C S + E DL V+I+ + + LR F+ TE L DNK++C C
Sbjct: 650 YLRSKIKCMKCHYKSERHERMMDLTVEIEGDIEKLEDALRRFTGTEILDGDNKYQCGRCK 709
Query: 198 SYQEAQ 203
SY++A+
Sbjct: 710 SYEKAK 715
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GN+CY+N+VLQ L F P ++ +K NKE +C F ++
Sbjct: 521 RPCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVNKEWCFTC---EFESLMLK 577
Query: 283 KKKVGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
K+ S ++P +++L+ + ++DAHEFL + I+ + C+K
Sbjct: 578 AKEGKSPLSPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCLK 626
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E LC DN
Sbjct: 166 -IHDIFGGWWRSQIKCLLCQGTSDTYDCFLDIPLDISSAQSVKQALWDTEKSEELCGDNA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGKC 230
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L E+ + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSHILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L + L RF +K++R +V +P L+L+ + LS+ P
Sbjct: 238 KTLHVHIAPKVLMVVLNRFSAFTGNKLDR------KVSYPEFLDLKPY-LSEPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 290 YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 337
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY + + +++ + R+N
Sbjct: 338 ENAYVLFYVQQANLKQVSIDMPEGRIN 364
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|195128351|ref|XP_002008627.1| GI11709 [Drosophila mojavensis]
gi|193920236|gb|EDW19103.1| GI11709 [Drosophila mojavensis]
Length = 710
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEF ++ ++ + + + +KS S+ GG N S
Sbjct: 438 LLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKSEHESKSNSSSATGG---NSS 494
Query: 123 SSGFEEPT--------WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS--- 171
SS T + +IF G+L S+ C C+ VS+ + F+D+ +D+ + TS
Sbjct: 495 SSANATATHSYGQCNCIIDQIFTGMLQSDVVCQACKGVSTTFDPFWDISLDLGETTSHGG 554
Query: 172 -----ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ CL ++ E L S K KC C SYQE+
Sbjct: 555 VTPKTLIDCLERYTRAEHLGSAAKIKCSTCKSYQES 590
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMYNLVAV 388
++ LP +++ HLKRF++ ++R K+S + FP+E + + N D ++L AV
Sbjct: 596 LRTLPSVVSFHLKRFEHSALIDR--KISSFIQFPVEFDMTPFMSEKNNAYGDFRFSLYAV 653
Query: 389 VIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYIL 447
V H G+ + GHY + V+ D W+ DD V+ + S Q GY+L
Sbjct: 654 VNHVGT-IDTGHYTAYVRHQKDTWVKCDDHVIT------------MASLKQVLDSEGYLL 700
Query: 448 FYQ 450
FY
Sbjct: 701 FYH 703
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N G TC+ N ++QAL D + + K+ L C ++ LF + +
Sbjct: 372 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRHDCGKSSHKCLVCEVSRLFQEFYSGSRT 431
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
S+ + + + Y QQDAHEF ++ ++ C+K K
Sbjct: 432 PLSL--HRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAK 476
>gi|402080094|gb|EJT75239.1| hypothetical protein GGTG_05176 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 517
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 33/193 (17%)
Query: 276 FHNIATHKKKVGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE--KCMKVK 332
N+A +KK GS A K + L+ D D Y++ D E+ N + + +K
Sbjct: 339 LENLAQRRKKAGSSSAAKAGVLTLQDCLD--DEYVKSDKCEYRCHSCNSTQQARRHTSIK 396
Query: 333 KLPMILALHLKRFKYMDKMNRH---VKVSHRVVFPLELRLFHLSDDAVNPDR-------- 381
+LP +L++ LKRF+Y K RH KV V FPL L +F ++ + D
Sbjct: 397 RLPNVLSIQLKRFEY--KGGRHDKAAKVETPVQFPLSLNMFPYTNRGRSGDSKENYELAR 454
Query: 382 --MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
Y+L+ VV+H G + GHY S + D W +F+D V+ +S +
Sbjct: 455 SCTYDLLGVVVHVGE-IDTGHYTSYCRVGDQWFVFNDHKVEMAAKSDV------------ 501
Query: 440 SSETGYILFYQSR 452
S Y+LFY R
Sbjct: 502 LSAKAYLLFYIIR 514
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
+QDAHEF FL L ER + ++ G HS + VH+ F G
Sbjct: 269 EQDAHEFFQFLAEE-----LHERNGDGKRPEI-------GSEHSCNCI-----VHQTFYG 311
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDI-------KQNTSITQCLRGFSSTETLCSDN-- 189
L S T C C V+++ + F DL + + K+ S + G + + D
Sbjct: 312 KLQSTTTCQACHGVTNQVQSFLDLSLGLENLAQRRKKAGSSSAAKAGVLTLQDCLDDEYV 371
Query: 190 -----KFKCDNCASYQEAQ 203
+++C +C S Q+A+
Sbjct: 372 KSDKCEYRCHSCNSTQQAR 390
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 5/106 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK-NKETLLSCLAD-LFHNIATHKK 284
G+ N G TCY N +LQ R+ L ++ LSC D +F + +
Sbjct: 181 GIYNAGATCYQNVILQTFLHNPMLRNFYLSDGHRSSDCGVSYCLSCAMDEIFQDFYALES 240
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYM---QQDAHEFLNFLINHINEK 327
G A E+ F+N + +QDAHEF FL ++E+
Sbjct: 241 TNGYTAANILSGFWISERKAFENLVTTKEQDAHEFFQFLAEELHER 286
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTVTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S L A + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLFASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF++ I+ + + L E GG+ S ++ T+ H IF G
Sbjct: 107 QEDAHEFMSSAIHLMQSICLDE---------------AGGEKGVDSCTQQTTFTHHIFGG 151
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ KC C S++ E DL V+I N S+ L F++ E L +NK+KC+ C
Sbjct: 152 LLQSQVKCNQCHLQSNRYEVMMDLAVEIPGNVRSLEDALGVFTAPEILDGENKYKCNRCD 211
Query: 198 SYQEA-------QGPNI 207
+Y +A + PNI
Sbjct: 212 AYVDAYKQLTVHEAPNI 228
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C+ N+VLQ + +P +L K + C A K+
Sbjct: 24 GLLNCGNSCFVNAVLQCFTYTQPLVAYLLSGDHGRKCKCKKTDWCFICALQEHAVKVKQR 83
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P ++ LR + Q+DAHEF++ I+ + C+
Sbjct: 84 IPFSPSGILSHLRSIARGLNYGNQEDAHEFMSSAIHLMQSICL 126
>gi|407039668|gb|EKE39758.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 1477
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 17/147 (11%)
Query: 321 INHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVN-P 379
++ I C+K P L LHLKRF++ + + +K++ R FP EL L+ + +N P
Sbjct: 478 VDAIRRTCIKTP--PNTLILHLKRFEFDYETLQRIKINDRYEFPRELDLYPYCIEHINHP 535
Query: 380 DR-------MYNLVAVVIHCGSGPNRGHYISIVK---SHDFWLLFDDDVVDKIDQSTIED 429
++ + LV V++H G+ + GHY S +K + D W F+DD++DK D +T+E+
Sbjct: 536 EKKDENGEYKFKLVGVLVHLGT-LDSGHYYSYIKDQETGDEWFSFNDDLIDKFDINTLEE 594
Query: 430 F-FGLTSDHQKSSETGYILFYQSRDST 455
FG + YILFYQ T
Sbjct: 595 SCFG--GGQYSKHYSAYILFYQKEKPT 619
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
+ GL N G TCY NS+ Q LY FR+ ++ KA ++ + LF + H+
Sbjct: 296 FVGLENLGCTCYINSLTQQLYMNPYFRNSIMNVKATDET---PYIKTYQKLFTEL--HET 350
Query: 285 KVGSIAPKKFITRLRKEK-DEFDNYMQQDAHEFLN 318
KV I ++++ L+ E E + Y+Q D HEFL+
Sbjct: 351 KVRYINTDEYVSSLKGEDGKELNPYVQMDTHEFLS 385
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 57/146 (39%), Gaps = 39/146 (26%)
Query: 74 FDNYMQQDAHEFLNFLINHIN------------EVILSERPQSNAKSKLSAPDGGGGDNH 121
F Y QQDAHEF+ +L++H++ VIL E A SK
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLTASSKCCINGAS----- 307
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------ 169
T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 308 --------TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENG 359
Query: 170 --TSITQCLRGFSSTETLCSDNKFKC 193
++ CLR F+ E L + C
Sbjct: 360 PMCTLRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 591 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 648
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 649 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 696
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 697 LFYVERQA 704
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 61/146 (41%), Gaps = 39/146 (26%)
Query: 74 FDNYMQQDAHEFLNFLINHIN------------EVILSERPQSNAKSKLSAPDGGGGDNH 121
F Y QQDAHEF+ +L++H++ VIL E +A +K N
Sbjct: 444 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCI-------NG 496
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------ 169
+S T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 497 AS------TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENG 550
Query: 170 --TSITQCLRGFSSTETLCSDNKFKC 193
S+ CLR F+ E L + C
Sbjct: 551 PLCSLRDCLRSFTDLEELDETELYMC 576
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRD-RVLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 351 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 410
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 411 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 464
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ +E T + IF G
Sbjct: 266 QEDAHEFMRFSIDTMQSVCLDEF---------------GGEKAVPPNLQETTLIQHIFGG 310
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L SE C C +S++ E+ DL V+I + S+ +CL F++ E L +N +KC+ C
Sbjct: 311 RLQSEVICTKCNKISNQYENMMDLTVEIHGDAASLEECLDQFTARERLDGENMYKCEGCK 370
Query: 198 SYQEA 202
Y +A
Sbjct: 371 DYVKA 375
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
FPP GL+N GN+C++N VLQ L F KP +LE K ++ L + ++
Sbjct: 180 FPP----CGLLNCGNSCFANVVLQCLSFTKPLVAYLLE-KGHRRECSCNDWCFLCEFENH 234
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ + + +P ++RL Q+DAHEF+ F I+ + C+
Sbjct: 235 VERTRLSSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCL 285
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ VK P IL + LKRF+ R K++ R+ FP L L +A + +Y L V
Sbjct: 379 LTVKCAPNILTIALKRFQ----SGRFGKLNKRISFPETLNLSPYMSEAGDGSDIYKLYGV 434
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V+H + GHYI +K DF W DD V ++ +E+ S+
Sbjct: 435 VVHIDMLNASFFGHYICYIK--DFQGNWYRIDDWKVMTVE---VEEVL---------SQG 480
Query: 444 GYILFY 449
Y+L Y
Sbjct: 481 AYMLLY 486
>gi|356551761|ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1045
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL + + V L E GDN S S EE +
Sbjct: 584 QLGNGREEDAHEFLRLAVETMQSVCLME----------------SGDNMSDSLKEETNLM 627
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK-QNTSITQCLRGFSSTETLCSDNKF 191
F G L S+ KC+ C S E DL V+I+ + T++ + L+ F+S ETL +NK+
Sbjct: 628 GLTFGGYLQSKIKCMKCGGKSECQERMMDLTVEIEGEITTLEEALQQFTSAETLDGENKY 687
Query: 192 KCDNCASYQEAQ 203
C C SY++A+
Sbjct: 688 HCVRCKSYEKAK 699
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL+N GN+CY+N+VLQ L F P +L+ +K+ NK+ +C F ++ K
Sbjct: 507 FGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHSKSCANKKWCFTC---EFESLILKSK 563
Query: 285 KVGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
S I+P +++L+ + N ++DAHEFL + + C+
Sbjct: 564 DTNSPISPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCL 609
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 62/145 (42%), Gaps = 31/145 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNC 196
+ CLR F+ E L + C C
Sbjct: 364 LRDCLRSFTDLEELDETELYMCHRC 388
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAFATHEGRWFHFNDSTVTLTDEETV------------LKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF G+L +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSPTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 435
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 436 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 483
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 484 LFYVERQA 491
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 231 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 341
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 342 LRDCLRSFTDLEELDETELYMC 363
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 197
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 251
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D LE K + + N L ++ A K++
Sbjct: 328 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAELIKQI 387
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 388 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 443
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP---DRMYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ +P +Y+L+AV
Sbjct: 837 LPKILVVHLKRFSY----SRYWRDKLDTVVEFPIRGLNMSEFVCDPRGGSYVYDLIAVSN 892
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 893 HYGAM-GVGHYTAYAKNKVNGEWYYFDDSSV------------SLASEDQIVTKAAYVLF 939
Query: 449 YQSRD 453
YQ RD
Sbjct: 940 YQRRD 944
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N + S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 362 IQKLPKALCLHLKRFHWTAYLRN--KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLA 419
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 420 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 467
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 468 LFYVERQA 475
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVI------LSERPQSNAKSKLSAPDGGGGDNHSSSGFE 127
F Y QQDAHEF+ +L++H++ + +S KS LSA + + S
Sbjct: 215 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEKSTLSASNKCCINGAS----- 269
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSIT 173
T V IF GIL +E CL C T S K + F DL +DI S+
Sbjct: 270 --TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLR 327
Query: 174 QCLRGFSSTETLCSDNKFKC 193
CLR F+ E L + C
Sbjct: 328 DCLRSFTDLEELDETELYMC 347
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N++LQ+L R V E++ L L+ T
Sbjct: 160 GLRNLGNTCFMNAILQSL------RSLVEEFRKT-----------LCALWQGSQT----- 197
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 -AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 235
>gi|313235507|emb|CBY10962.1| unnamed protein product [Oikopleura dioica]
Length = 716
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY----KAKNKKNKETLLS-C 271
DR PP GL N GNTCY NSVLQ L F + +Y K++ K K+T L+
Sbjct: 102 DRAPPKTGCVGLRNLGNTCYMNSVLQCLLHEPTFFNFFADYENTSKSEGKGFKDTALTPV 161
Query: 272 LADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
DLF+N T K + PK F RL E F + Q D EFL L++ I+E+ +
Sbjct: 162 FRDLFNNYWTSKSSF--VVPKDFKERLDVECTMFAGFYQHDGQEFLAVLLDRIHEEIVAA 219
Query: 332 KK 333
K
Sbjct: 220 TK 221
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSLP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E LC DN
Sbjct: 166 -IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGKC 230
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L E+ + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSHILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L + L RF +K++R +V +P L+L+ + LS+ P
Sbjct: 238 KTLHVHIAPKVLMVVLNRFSAFTGNKLDR------KVSYPEFLDLKPY-LSEPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 290 YTLYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 337
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+L Y + + +++ + R+N
Sbjct: 338 ENAYVLSYVQQANLKQVSIDMPEGRIN 364
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 371 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 428
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 429 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 476
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 477 LFYVERQA 484
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 224 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 278
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 279 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 334
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 335 LRDCLRSFTDLEELDETELYMC 356
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 131 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 190
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 191 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 244
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTLTDEDTV------------GKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + + + L N T V
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSGTAILQENSSLAASNKCCIN-GASTVVT 311
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQCLRGF 179
+F G+L +E CL C T S K + F DL +DI S+ CLR F
Sbjct: 312 AVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSF 371
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 372 TDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSSVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|242000514|ref|XP_002434900.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
gi|215498230|gb|EEC07724.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
Length = 1161
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 15/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL ++++++ K+ L+ DGG + +S +E T V+EIF G
Sbjct: 421 QEDAHEFLRYVVDNL------------WKAALANHDGGPKLDPAS---KETTVVNEIFGG 465
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
S+ C+ C+ S+ + F DL +DIK +S+ + L F E L +DN +KC C
Sbjct: 466 YHRSQVICMRCKKTSNTYDHFMDLILDIKNASSLEKALEKFVEPELLQNDNAYKCPRCNV 525
Query: 199 YQEAQ 203
EAQ
Sbjct: 526 KVEAQ 530
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 30/173 (17%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GLVN GNTC+ N+V+Q L +C P + +L K K + +L ++ K
Sbjct: 252 GLVNLGNTCFMNTVIQCLTYCPPLANYLLHQDNHCAKCKTINFCMMCELQKHMRRALDKP 311
Query: 287 G-SIAPKKFITRLRKEKDEFDNYM------QQDAHEFL--NFLINHINEKCMK------- 330
G +I P RL+ F M ++ +F+ L N KC +
Sbjct: 312 GDAIKPIYIYQRLKGGPLLFPQPMSNASSLEKALEKFVEPELLQNDNAYKCPRCNVKVEA 371
Query: 331 -----VKKLPMILALHLKRF----KYMDKMNRHVKVSHRVVFPLELRLFHLSD 374
V + P + KRF + K+ +HV R LE+R F +SD
Sbjct: 372 QKRFTVHRPPNVATFQFKRFDSNRMFGGKITKHVSYPER----LEMRPF-MSD 419
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LS P N +S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLS-PSNKCCINGAS-- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ F L + + P+ +Y+L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLE 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V ++ T+ + YI
Sbjct: 460 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEETV------------AKAKAYI 507
Query: 447 LFYQSR 452
LFY R
Sbjct: 508 LFYVER 513
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + E S + S LS + ++ T V
Sbjct: 255 FRGYQQQDAHEFMRYLLDHLHLELQGEFDGS-SHSVLSQANCSRSVSNKCCINGASTVVT 313
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSITQCLRGF 179
+F G+L +E CL C T S K + F DL +DI ++ CLR F
Sbjct: 314 SVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTCTLRDCLRSF 373
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 374 TDLEELDETELYTC 387
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 162 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDVNVSLV 221
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 222 EEFRKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 275
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL FLI+ + + L +P+ E TWV +F G
Sbjct: 192 QEDAHEFLRFLIDAMQKACLHGQPKK-----------------VDPAVAEATWVSRVFGG 234
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S +C +C S + DL +DI+ +S+ Q L+ F + + L +K+KC+ C
Sbjct: 235 KLRSRVRCCSCNHPSDTFDSILDLSLDIQNASSVHQALKHFVAIDHLRGADKYKCEKC 292
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRMYN 384
EK + P+ L +HLKRF + K++H V + L L +S DA Y
Sbjct: 299 EKQFTIDSAPLALTVHLKRFTPFGR-----KLAHVVQYKEHLSLAGAMSKDAKEQSPQYK 353
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L V+ H GSGPN GHY + K + W +DD V + ++ ++
Sbjct: 354 LYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLD------------LKS 401
Query: 444 GYILFYQSRDSTDARTMNSNDCRVNG 469
Y+LFY +++ + + D + G
Sbjct: 402 AYMLFYLRDEASALNDIIATDAKGKG 427
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA--THKK 284
GL N GNTC+ NS LQ L P VL + + C+ F +A + K
Sbjct: 109 GLYNQGNTCFLNSALQCLLHTPPLLHAVLNHPRDCPAQDDGF--CITCSFRRVAQDSFKV 166
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
K + +P + L K Q+DAHEFL FLI+ + + C+
Sbjct: 167 KGNAFSPSPILHNLHKIAKSLRRGRQEDAHEFLRFLIDAMQKACL 211
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 58/146 (39%), Gaps = 39/146 (26%)
Query: 74 FDNYMQQDAHEFLNFLINHIN------------EVILSERPQSNAKSKLSAPDGGGGDNH 121
F Y QQDAHEF+ +L++H++ VIL E +A +K
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSSLSASNKCCINGAS----- 307
Query: 122 SSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------ 169
T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 308 --------TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENG 359
Query: 170 --TSITQCLRGFSSTETLCSDNKFKC 193
S+ CLR F+ E L + C
Sbjct: 360 PLCSLRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 374 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 431
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 432 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 479
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 480 LFYVERQA 487
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + L ++S + + G ++ T V
Sbjct: 227 FRGYQQQDAHEFMRYLLDHLH-LELQGGFNGVSRSVILQENSGLSASNKCCINGASTVVT 285
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQCLRGF 179
IF GIL +E CL C T S K + F DL +DI S+ CLR F
Sbjct: 286 AIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPMCSLRDCLRSF 345
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 346 TDLEELDETELYMC 359
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 134 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 193
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 194 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 247
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 435
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 436 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 483
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 484 LFYVERQA 491
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 231 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 341
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 342 LRDCLRSFTDLEELDETELYMC 363
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 197
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 251
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 370 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 427
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 428 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 475
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 476 LFYVERQA 483
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q NA LSA + + S
Sbjct: 223 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENAT--LSASNKCCINGAS--- 277
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI +
Sbjct: 278 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMCT 333
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 334 LRDCLRSFTDLEELDETELYMC 355
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 130 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 189
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 190 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 243
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 370 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 427
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 428 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 475
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 476 LFYVERQA 483
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 223 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 277
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 278 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 333
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 334 LRDCLRSFTDLEELDETELYMC 355
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 130 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 189
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 190 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 243
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 461
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 462 LFYVERQA 469
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 263
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 264 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 319
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 320 LRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 43/148 (29%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW-- 131
F Y QQDAHEF+ +L++H++ L DG G +HS+ E T
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLH---------------LELQDGFNGVSHSAILQENSTLST 297
Query: 132 ------------VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---------- 169
V IF GIL +E CL C T S K + F DL +DI
Sbjct: 298 SNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQE 357
Query: 170 ----TSITQCLRGFSSTETLCSDNKFKC 193
S+ CLR F+ E L + C
Sbjct: 358 NGPVCSLRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|345486298|ref|XP_003425440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like [Nasonia
vitripennis]
Length = 450
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD-----DAVNPDRMY 383
+K KLP IL LHLKRF+Y K N +K++++V FP L L + D + Y
Sbjct: 146 LKFIKLPFILTLHLKRFQYDVKSNSTIKLNNKVTFPEVLNLNSIIDPFEDKNNAADSNFY 205
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF--WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L ++VIH G+ +GHY + ++ D W F+D V +I + E FG +
Sbjct: 206 KLFSIVIHSGTAV-QGHYYTYIQDLDTNEWFCFNDSTVIRISKHDFEISFG---NGNSGE 261
Query: 442 ETGYILFYQSRDSTDARTM 460
Y+L Y+ + D +
Sbjct: 262 GNAYLLIYRRCNEVDETAL 280
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 461
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 462 LFYVERQA 469
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N + S Q N S LSA + + S
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQEN--STLSASNKCCINGAS--- 263
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 264 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCS 319
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 320 LRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 461
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 462 LFYVERQA 469
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 43/148 (29%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW-- 131
F Y QQDAHEF+ +L++H++ L DG G +HS+ E T
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLH---------------LELQDGFNGVSHSAILQENSTLST 253
Query: 132 ------------VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---------- 169
V IF GIL +E CL C T S K + F DL +DI
Sbjct: 254 SNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQE 313
Query: 170 ----TSITQCLRGFSSTETLCSDNKFKC 193
S+ CLR F+ E L + C
Sbjct: 314 NGPVCSLRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + LE + + + N+E L ++ A K++
Sbjct: 320 GLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQM 379
Query: 287 -----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P LAL
Sbjct: 380 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY-LALR 438
Query: 342 LKRFKYMDKMNRHVKVSHRV 361
+ + + + +HR+
Sbjct: 439 DAEGRPDEIVAKEAWANHRL 458
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 875 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPIRDLNMSEFVCDPKADPYIYDLIAVSN 930
Query: 391 HCGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V + ED Q ++ Y+LF
Sbjct: 931 HYGGM-GGGHYTAYGKNKADGKWYYFDDSSV----SAATED--------QIVTKAAYVLF 977
Query: 449 YQSRDS 454
YQ RD+
Sbjct: 978 YQRRDA 983
>gi|147817822|emb|CAN75583.1| hypothetical protein VITISV_036537 [Vitis vinifera]
Length = 275
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMYNL 385
K +K++KL I+ LHL RF Y D+ K+ V FPLEL L L R Y L
Sbjct: 161 KSVKIQKLSEIMILHLMRF-YYDENQGSTKLHKPVTFPLELVLGRELLVSPTTEGRKYEL 219
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD-FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA + H G P++GHY + + H WL FDD V+ + S + E
Sbjct: 220 VATITHHGRDPSKGHYTTDARHHSGHWLRFDDSAVNVVSTSKV------------LHEHP 267
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 268 YVLFYK 273
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 311 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 368
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 369 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 416
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 417 LFYVERQA 424
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 164 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 218
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 219 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 274
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 275 LRDCLRSFTDLEELDETELYMC 296
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 71 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 130
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 131 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 184
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 311 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 368
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 369 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 416
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 417 LFYVERQA 424
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 164 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 218
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 219 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 274
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 275 LRDCLRSFTDLEELDETELYMC 296
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 71 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 130
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 131 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 184
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 461
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 462 LFYVERQA 469
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 263
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 264 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 319
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 320 LRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 193
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 372 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 429
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 430 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------LKAKAYI 477
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 478 LFYVERQA 485
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N + S Q N S LSA + + S
Sbjct: 225 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGISRSSILQEN--STLSASNKCCINGAS--- 279
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 280 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCS 335
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 336 LRDCLRSFTDLEELDETELYMC 357
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 27/120 (22%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRD--------------RVLEYKAKNKKNK--- 265
GL N GNTC+ N++LQ+L FC F++ R +++ + N
Sbjct: 132 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGENNVSLV 191
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
E L L+ T + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 192 EEFRKTLCALWQGSQT------AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 245
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 352 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLA 409
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 410 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 457
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 458 LFYVERQA 465
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 205 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--SALSASNKCCINGAS--- 259
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 260 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 315
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 316 LRDCLRSFTDLEELDETELYMC 337
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 112 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 171
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 172 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 225
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S F + Q+DAHEFL +L+ + + L +K+ +++P+ +E T
Sbjct: 82 SRAFQPWRQEDAHEFLRYLMEALQKDCLP------SKTPMNSPE------------QEKT 123
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+++IF G L S+ KC NC S + F DL +DI + S+ + L F++ E L DNK
Sbjct: 124 LLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANEILDGDNK 183
Query: 191 FKCDNC 196
+ C+ C
Sbjct: 184 YHCEKC 189
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRD--RVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NSVLQ L + +P + + ++K K + + L N
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVRNALQSWG 62
Query: 285 KVGSIAPKKFITRLRKE----KDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
KV IAP I+R+ F + Q+DAHEFL +L+ + + C+ K PM
Sbjct: 63 KV--IAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLP-SKTPM 115
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 25/134 (18%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA 376
EKC K ++ P +L + KRF + K+ +V F +L + +A
Sbjct: 187 EKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQ--KIDKKVHFGRKLDITPFMSNA 244
Query: 377 VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
+ +Y+L V++H G GHY V+ S D W + DD V ++ + T+ +
Sbjct: 245 RD-GAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLN------ 297
Query: 436 DHQKSSETGYILFY 449
+ YILFY
Sbjct: 298 ------QKAYILFY 305
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D LE K + + N+ L ++ A K++
Sbjct: 268 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNPLGMRGEIAEAYADLIKQM 327
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 328 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 383
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 22/128 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP---DRMYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ +P +Y+L+AV
Sbjct: 777 LPRILVVHLKRFSY----SRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSN 832
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ ++ W FDD V + S+ Q ++ Y+LF
Sbjct: 833 HYGAM-GVGHYTAYAKNKVNNKWYYFDDSSV------------SVASEDQIVTKAAYVLF 879
Query: 449 YQSRDSTD 456
Y+ R+S +
Sbjct: 880 YERRNSEE 887
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D LE K + + N L ++ A K++
Sbjct: 281 GLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIAEAYAELIKQI 340
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 341 WSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 22/128 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP---DRMYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ +P +Y+L+AV
Sbjct: 790 LPKILVVHLKRFSY----SRYWRDKLDTVVEFPIRGLNMSEFVCDPRGSSYVYDLIAVSN 845
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 846 HYGAM-GVGHYTAYAKNKVNGKWYYFDDSSV------------SLASEDQIVTKAAYVLF 892
Query: 449 YQSRDSTD 456
YQ R+S +
Sbjct: 893 YQRRNSEE 900
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S F + Q+DAHEFL +L+ + + L +K+ +++P+ +E T
Sbjct: 82 SRAFQPWRQEDAHEFLRYLMEALQKDCLP------SKTPMNSPE------------QEKT 123
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+++IF G L S+ KC NC S + F DL +DI + S+ + L F++ E L DNK
Sbjct: 124 LLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANEILDGDNK 183
Query: 191 FKCDNC 196
+ C+ C
Sbjct: 184 YHCEKC 189
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRD--RVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NSVLQ L + +P + + ++K K + + L N
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVKNALQSWG 62
Query: 285 KVGSIAPKKFITRLRKE----KDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
KV IAP I+R+ F + Q+DAHEFL +L+ + + C+ K PM
Sbjct: 63 KV--IAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLP-SKTPM 115
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 25/134 (18%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA 376
EKC K ++ P +L + KRF + K+ +V F +L + +A
Sbjct: 187 EKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQ--KIDKKVHFGRKLDITPFMSNA 244
Query: 377 VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
+ +Y+L V++H G GHY V+ S D W + DD V ++ + T+ +
Sbjct: 245 RD-GAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLN------ 297
Query: 436 DHQKSSETGYILFY 449
+ YILFY
Sbjct: 298 ------QKAYILFY 305
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL + I+ + V L E ++++A D S EE T +
Sbjct: 635 QLGNGREEDAHEFLRYAIDAMQSVCLKE-------ARVNAVD---------SFEEEATLI 678
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKF 191
F G L S+ KC+ C S E DL V+I+ + + LR F+ TE L DNK+
Sbjct: 679 GLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIEGDIGKLEDALRRFTGTEILDGDNKY 738
Query: 192 KCDNCASYQEAQ 203
+C C SY++A+
Sbjct: 739 QCGRCRSYEKAK 750
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GN+CY+N+VLQ L F P ++ +K KE SC + I
Sbjct: 556 RPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVKKERCFSC--EFEKVILKA 613
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
K+ ++P +++L+ + N ++DAHEFL + I+ + C+K ++ +
Sbjct: 614 KEGKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEARVNAV 668
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + LE + + + N+E L ++ A K++
Sbjct: 269 GLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEINRENPLGMRGEIAEAYADLVKQM 328
Query: 287 -----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P LAL
Sbjct: 329 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY-LALR 387
Query: 342 LKRFKYMDKMNRHVKVSHRV 361
+ + + + +HR+
Sbjct: 388 DAEGRPDEIVAKEAWANHRL 407
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 824 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPIRDLNMSEFVCDPKADPYIYDLIAVSN 879
Query: 391 HCGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V + ED Q ++ Y+LF
Sbjct: 880 HYGGM-GGGHYTAYGKNKADGKWYYFDDSSV----SAATED--------QIVTKAAYVLF 926
Query: 449 YQSRDS 454
YQ RD+
Sbjct: 927 YQRRDA 932
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 24/150 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + V L E GG+ +E T + IF G
Sbjct: 264 QEDAHEFMRFAIDTMQSVCLDEF---------------GGEKAVEPASQETTIIQHIFGG 308
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I + S+ +CL F+ E L +N +KCD C
Sbjct: 309 RLQSQVICTKCNKISNQFENMMDLTVEIHGDAESLEECLNQFTDKEWLHGENMYKCDGCN 368
Query: 198 SYQEA-------QGPNISALE-KEIGPDRF 219
Y +A + PN+ + K RF
Sbjct: 369 DYVKAWKRLTIQRAPNVLTIALKRFQSGRF 398
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 5/112 (4%)
Query: 218 RFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFH 277
RFPP GL+N GN+C++N VLQ L + +P +LE K + K L +
Sbjct: 177 RFPP----CGLLNCGNSCFANVVLQCLTYTRPLVAYLLE-KGHQTECKHNDWCFLCEFQS 231
Query: 278 NIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
++ + +P ++RLR Q+DAHEF+ F I+ + C+
Sbjct: 232 HVERASQSALPFSPMNILSRLRNIGGNLGYGRQEDAHEFMRFAIDTMQSVCL 283
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P +L + LKRF+ R K++ RV FP L L + + +Y L AV
Sbjct: 377 LTIQRAPNVLTIALKRFQ----SGRFGKLNKRVTFPETLDLSPYMSEKGDGADVYKLYAV 432
Query: 389 VIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKID 423
V+H + GHYI K H W DD V ++
Sbjct: 433 VVHVDMLNASFFGHYICYTKDFHGNWHRIDDSKVSSVE 470
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 231 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 288
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 289 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 336
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 337 LFYVERQA 344
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 84 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 138
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 139 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCW 194
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 195 VRDCLRSFTDLEELDETELYMC 216
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + V + V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRNKVDI--YVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF G L +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGFLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|330840214|ref|XP_003292114.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
gi|325077668|gb|EGC31366.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
Length = 413
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 61/270 (22%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEF F+I+ + +V LS+ P+ + + S T + IF G
Sbjct: 95 QEDSHEFFCFVIDSLQKVCLSKFPKGSISPRDSMT----------------TVIGSIFGG 138
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ KC C+ S+ ++F DL V+I Q S+T+ L+ F E L +N +KC C
Sbjct: 139 YLRSQVKCTVCQYESNTFDEFMDLCVEINQANSLTKGLQNFVKPEILDGENGYKCKKCNK 198
Query: 199 YQEAQGPNISALEKEIGPDRFPPNERYFGLVN-----------FGNTC-----------Y 236
+A+ +L+ EI P + F +N FG T Y
Sbjct: 199 LVKAE----KSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFGQTLDLSPYMTQKNDY 254
Query: 237 S----NSVLQAL--------YFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
S NSVL L Y+C + YK ++++S ++F+ ++
Sbjct: 255 SIYDLNSVLVHLGDSANSGHYYCYVKGSNGVWYKM-----DDSMVSQAYNVFYTKGYTER 309
Query: 285 KV--GSIAPKKFITRLRKEKDEFDNYMQQD 312
+ S+ PK + RK +DE +QD
Sbjct: 310 SINTNSVIPKNTLGLKRKLEDEVSELPKQD 339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GNTC+ NSVLQ L + + ++ + +KN NK + C ++ H IA+HK
Sbjct: 12 GLYNIGNTCFMNSVLQCLTYSPALANYMISGEHSKNCTNKSFCIFCSIEI-HIIASHKAT 70
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ P + K F Q+D+HEF F+I+ + + C+
Sbjct: 71 GKATTPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCL 114
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 12/101 (11%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMD----KMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR 381
EK ++++ P +L + +KRF +++ K N+H++ L+L + N
Sbjct: 203 EKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFGQT----LDLSPYMTQK---NDYS 255
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDK 421
+Y+L +V++H G N GHY VK S+ W DD +V +
Sbjct: 256 IYDLNSVLVHLGDSANSGHYYCYVKGSNGVWYKMDDSMVSQ 296
>gi|145483549|ref|XP_001427797.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394880|emb|CAK60399.1| unnamed protein product [Paramecium tetraurelia]
Length = 604
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 13/142 (9%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +++ KLP IL +HLKRF+Y K + K++ +V FPL + N D +YNL
Sbjct: 340 KKGIRIWKLPNILIIHLKRFEYGTKQSG--KITQKVNFPLNQLDMSPYCNQQN-DTVYNL 396
Query: 386 VAVVIHCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKID--QSTIEDFFGLTSDHQKSS 441
AV H GS GHY+SI K + W +++DD V K+ Q I+D + D Q
Sbjct: 397 YAVAQHHGS-LQYGHYVSICKHRVDNQWYMYNDDAVLKVIQFQLQIQDPEKVIVDSQ--- 452
Query: 442 ETGYILFYQSRDSTDARTMNSN 463
Y+LFYQ + T R +N
Sbjct: 453 --AYVLFYQKQTETIFRQTITN 472
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 35/143 (24%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRD----RVLEYKA-KNKK--NKETLLSCLADLFHN 278
GL N GNTCY NS + L +P D RV E + KN K +K + C A L +
Sbjct: 70 VGLKNLGNTCYFNSAIHCLSHTQPLLDYMLSRVFEKEINKNSKLGSKGQVTECFAQLLSD 129
Query: 279 IATHKKKVGSIAPKKFITRLRKEKD------EFDNYM----------------------Q 310
I ++ +G + K KD +++N++ Q
Sbjct: 130 IWKDERSIGMSTINQGNDTKDKSKDKQLKQKQYENWVDPLRNTQGDLKQDVNNQHNQLEQ 189
Query: 311 QDAHEFLNFLINHINEKCMKVKK 333
+D E L++L++ I+E + KK
Sbjct: 190 EDCQELLSYLLDMIHEDLNRCKK 212
>gi|167384534|ref|XP_001736994.1| ubiquitin specific protease [Entamoeba dispar SAW760]
gi|165900412|gb|EDR26733.1| ubiquitin specific protease, putative [Entamoeba dispar SAW760]
Length = 1448
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 24/146 (16%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA 376
EKC K +K P L LHLKRF++ + + +K++ R FP EL L+ +
Sbjct: 463 EKCQKKVDAIRRTCIKTPPNTLILHLKRFEFDYETLQRIKINDRYEFPRELDLYPYCIEH 522
Query: 377 VN-PDR-------MYNLVAVVIHCGSGPNRGHYISIVK---SHDFWLLFDDDVVDKIDQS 425
+N P++ + LV V++H G+ + GHY S +K + D W F+DD++DK D +
Sbjct: 523 INHPEKKDENGEYKFKLVGVLVHLGT-LDSGHYYSYIKDQETGDEWFSFNDDLIDKFDIN 581
Query: 426 TIEDF-FGLTSDHQKSSETGYILFYQ 450
T+E+ FG + YILFYQ
Sbjct: 582 TLEESCFG--GGQYSKHYSAYILFYQ 605
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
+ GL N G TCY NS+ Q LY FR+ ++ KA + + LF + H+
Sbjct: 287 FVGLENLGCTCYINSLTQQLYMNPYFRNSIMNVKATDDT---PYIKIYQKLFTEL--HET 341
Query: 285 KVGSIAPKKFITRLRKEK-DEFDNYMQQDAHEFLNFLINHINEKCMK 330
KV I +++++ L+ E E + Y+Q D HEFL+ ++ I EK +K
Sbjct: 342 KVRYINTEEYVSSLKGEDGKELNPYVQMDTHEFLSSTLDTI-EKELK 387
>gi|400599105|gb|EJP66809.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
2860]
Length = 1565
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 45/263 (17%)
Query: 108 SKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK 167
S L+ PD G + ++S GF W + + +E++ + +D Q D K
Sbjct: 468 SALTPPDSPGRETYNSDGF----WPNLLIDLPTFAESRNYREQLSQIRD------QTDGK 517
Query: 168 QNTSITQCLRGFSSTETLC----SDNKFKCDNCASYQ---EAQGPNISALEKEIGPDRFP 220
N+++ +R + TL DNK Q + PN SAL + R
Sbjct: 518 YNSTVQLHMRNLVTDATLVLDELIDNKLSVSTYKGQQTKFQKGVPNRSALSSKPNSARSS 577
Query: 221 PNER-------------------YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
P GL N GNTCY NS LQ + + +
Sbjct: 578 PGPEGIMTRGRAGRKKKLGRSVGVVGLQNLGNTCYMNSALQCFRSVEELTKFFITDAYLD 637
Query: 262 KKNKETLLS-------CLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAH 314
+ NK LL L H+I +++ GS++P+ F + + + + F + QQD+
Sbjct: 638 EINKTNLLGYNGKMAMAYGGLLHDI--YREGRGSVSPRDFKSTVGRCRSTFSGWGQQDSQ 695
Query: 315 EFLNFLINHINEKCMKVKKLPMI 337
EFL FL++ + E +V P I
Sbjct: 696 EFLGFLLDALQEDLSRVGNKPYI 718
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL-LSCLADLFHNIATHKKK 285
GL N GNTC++N+ LQ L + P + +L ++ + E + C+ + TH +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCI------MQTHITQ 164
Query: 286 VGS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
S I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 165 ALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + +P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------GKAKAYI 505
Query: 447 LFY 449
LFY
Sbjct: 506 LFY 508
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAVLQEN--STLSASSKCCVNGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDTSVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
>gi|357153956|ref|XP_003576621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like
[Brachypodium distachyon]
Length = 959
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 24/137 (17%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
++DAHEFL + I+ I + E + N KL+ EE T + +F G
Sbjct: 505 EEDAHEFLRYAIDTIQRASMKE-AEKNGVGKLA---------------EETTLMQLMFGG 548
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFKCDNCA 197
+ S+ KC C+ S + E DL V+I + S + + L F+STE L DNK+ C C
Sbjct: 549 FVRSQIKCTKCQVSSGQCERILDLTVEIDGDISTLEEALHQFTSTEVLDGDNKYHCSRCN 608
Query: 198 SYQEA-------QGPNI 207
SY+ A + PNI
Sbjct: 609 SYERAKKKLTIYEAPNI 625
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 50/124 (40%), Gaps = 20/124 (16%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-----------------YKAKNKKNKE 266
R FGL N GN+CY N+VLQ L F +P + E Y A K +
Sbjct: 405 RPFGLCNLGNSCYVNAVLQCLAFTRPLTAYLFEGLHSKKCKLMLNFYSMCYTAFCSKKEW 464
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
L L I K ++P ++ L F ++DAHEFL + I+ I
Sbjct: 465 CFLCEFEKL---IVEGKAGKSPLSPTGILSHLHDIGSSFGLGKEEDAHEFLRYAIDTIQR 521
Query: 327 KCMK 330
MK
Sbjct: 522 ASMK 525
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K + + + P IL + LKR++ K++ + FP L L + +Y L
Sbjct: 614 KKKLTIYEAPNILTIALKRYQ----TGSSGKINKAISFPECLNLSSYMSTTNDYSPVYRL 669
Query: 386 VAVVIH--CGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
AVV+H + GHY+ VK SH+ W DD V + ++E ++
Sbjct: 670 YAVVVHHDVQNAAFSGHYVCYVKDSHEKWHEMDDRQVKSV---SLEKVL---------TK 717
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 718 CAYMLFY 724
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 383 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 440
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 441 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 488
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 489 LFYVERQA 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + + + L G N T V
Sbjct: 236 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQENSALSGSNKCCIN-GASTVVT 294
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQCLRGF 179
IF GIL +E CL C T S K + F DL +DI S+ CLR F
Sbjct: 295 AIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLRDCLRSF 354
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 355 TDLEELDETELYMC 368
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 143 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 202
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 203 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 256
>gi|256079377|ref|XP_002575964.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
gi|353233379|emb|CCD80734.1| ubiquitin-specific peptidase 42 (C19 family) [Schistosoma mansoni]
Length = 799
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 77 YMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIF 136
Y Q+DAHEFL L++ + + L G S E + IF
Sbjct: 263 YQQEDAHEFLLGLLSRMEDSSL------------------AGLGKVSRKLSETNVIRRIF 304
Query: 137 QGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
G++ SE C +C VS++DE F+L +DI S+ QCL + +E L N +KC+NC
Sbjct: 305 GGVIRSEVTCHSCLKVSARDEQCFNLSMDITCARSLQQCLCNYVRSEELSGQNAYKCENC 364
Query: 197 ASYQEA 202
+ A
Sbjct: 365 HQLRAA 370
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
KC + + P IL + L RF +RH K+ RV FP L + +Y L
Sbjct: 372 RKCT-IYRAPPILIIQLNRF------SRHQKLDIRVDFPSSFNLRPFMTQSKGLPILYKL 424
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V H G GHY+S H WL +D V + +DH ++ Y
Sbjct: 425 YAIVNHEGYSCRSGHYVSFTLRHGQWLSLNDSFVSTTN-----------TDHVL-RQSPY 472
Query: 446 ILFYQS 451
+LFY++
Sbjct: 473 LLFYEA 478
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 223 ERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN-------------KETLL 269
+R G N GNTCY NSVLQ + P + +K N + ++
Sbjct: 166 KRALGFGNSGNTCYLNSVLQCILATGPLLAYI-NHKHSNPGSCIINSGRSSIPSLNKSRF 224
Query: 270 SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
L L I H + G P F+T +R Y Q+DAHEFL L++ + + +
Sbjct: 225 CVLCGLSRLINEHHSQNGRTIPSYFVTNVRAICPSLRPYQQEDAHEFLLGLLSRMEDSSL 284
>gi|18416380|ref|NP_567705.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
gi|75265551|sp|Q9SB51.1|UBP16_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 16; AltName:
Full=Deubiquitinating enzyme 16; Short=AtUBP16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|4220534|emb|CAA23007.1| putative protein [Arabidopsis thaliana]
gi|7269306|emb|CAB79366.1| putative protein [Arabidopsis thaliana]
gi|332659526|gb|AEE84926.1| ubiquitin carboxyl-terminal hydrolase 16 [Arabidopsis thaliana]
Length = 1008
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL F+++ + V + D SS E+ T +
Sbjct: 620 LGNGKEEDAHEFLRFVVDTMQSVCIKASEY---------------DMTKSSKLEDTTLIG 664
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C+ S E DL V+I + S + LR F+ TE L +NK++
Sbjct: 665 LTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYR 724
Query: 193 CDNCASYQEAQ 203
C +C SY+ A+
Sbjct: 725 CGSCKSYERAK 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL+N GN+C++N V Q L F P L+ + ++ KE +C + + K++
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKL--VVKAKEE 600
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
++P +++L+ N ++DAHEFL F+++ + C+K + M
Sbjct: 601 KSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDM 651
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 20/136 (14%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +K+ + P +L + LKRF+ + K++ + FP L L Y L
Sbjct: 735 KKKLKITEPPNVLTIALKRFQ----AGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKL 790
Query: 386 VAVVIHCG--SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V++H + GHY+ +++ + W DD V +TSD ++
Sbjct: 791 YGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTV-------------VTSDVERILTK 837
Query: 444 G-YILFYQSRDSTDAR 458
G Y+LFY T R
Sbjct: 838 GAYMLFYARCTPTPPR 853
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 19 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 60
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 61 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 118
>gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 1005
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + L+ + + + N+E L ++ + A K++
Sbjct: 321 GLSNLGNTCFMNSALQCLSNASPLTEYFLDDQYEAEINRENPLGMRGEIAESYADLVKQM 380
Query: 287 -----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P LAL
Sbjct: 381 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLMDGLHEDLNRVKKKPY-LALQ 439
Query: 342 LKRFKYMDKMNRHVKVSHRV 361
+ + + + +HR+
Sbjct: 440 DAGGRKDEIVAKEAWTNHRL 459
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 869 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPVRDLNMSEFVCDPKAGPYVYDLIAVSN 924
Query: 391 HCGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V S+ Q ++ Y+LF
Sbjct: 925 HYGGM-GGGHYTAYGKNKADGKWHYFDDSSVSA------------ASEDQIVTKAAYVLF 971
Query: 449 YQSRDSTDA 457
YQ RD+ D
Sbjct: 972 YQRRDAGDV 980
>gi|11993477|gb|AAG42757.1|AF302666_1 ubiquitin-specific protease 16 [Arabidopsis thaliana]
Length = 1008
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL F+++ + V + D SS E+ T +
Sbjct: 620 LGNGKEEDAHEFLRFVVDTMQSVCIKASEY---------------DMTKSSKLEDTTLIG 664
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C+ S E DL V+I + S + LR F+ TE L +NK++
Sbjct: 665 LTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYR 724
Query: 193 CDNCASYQEAQ 203
C +C SY+ A+
Sbjct: 725 CGSCKSYERAK 735
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL+N GN+C++N V Q L F P L+ + ++ KE +C + + K++
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKL--VVKAKEE 600
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
++P +++L+ N ++DAHEFL F+++ + C+K + M
Sbjct: 601 KSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDM 651
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 20/136 (14%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +K+ + P +L + LKRF+ + K++ + FP L L Y L
Sbjct: 735 KKKLKITEPPNVLTIALKRFQ----AGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKL 790
Query: 386 VAVVIHCG--SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V++H + GHY+ +++ + W DD V +TSD ++
Sbjct: 791 YGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTV-------------VTSDVERILTK 837
Query: 444 G-YILFYQSRDSTDAR 458
G Y+LFY T R
Sbjct: 838 GAYMLFYARCTPTPPR 853
>gi|223997540|ref|XP_002288443.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975551|gb|EED93879.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA-----T 281
GL+N GNTCY+NS +Q L + R +L + K N++ L L A
Sbjct: 4 GLINLGNTCYANSGIQCLSYLPLLRSYLLSGQFKGDLNRDNPLGTGGKLLEEFAELMQVM 63
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
K G AP+KF + L K + ++ QQDA E +N +I+ ++E +VKK P + AL
Sbjct: 64 WSGKYGVRAPQKFRSFLGKCRPQYSGADQQDAQELINDMIDMLHEDGNRVKKKPYVEALE 123
Query: 342 LKRFKYMD 349
K + D
Sbjct: 124 DKFIEKTD 131
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK-----KNKETLLSCLADLFHNI 279
+ GL N GNTC+ N+VLQ L KP RD L + + + + ++ L LAD+ +
Sbjct: 280 HIGLRNLGNTCFMNAVLQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADVIATL 339
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN-EKCMKVKKLPMIL 338
H + P +F + +K F Y QQDA EFL FL++ ++ E K +K P IL
Sbjct: 340 -WHPDTSEAANPSRFKSVFQKYVPSFTGYSQQDAQEFLKFLMDRLHVEINRKGRKSPCIL 398
Query: 339 A 339
+
Sbjct: 399 S 399
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 27/130 (20%)
Query: 327 KCMKVKKLPMILALHLKRF---KYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPD 380
K + +++ P IL LHL RF +Y K K S V FPL+ L+ F S+ A P
Sbjct: 512 KKLTIQRFPRILVLHLNRFSTTRYSIK-----KCSVYVDFPLQQLNLKEF-ASEKAGTP- 564
Query: 381 RMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
+YNL A+ H GS + GHY + K W +F+D V I S++Q
Sbjct: 565 -VYNLYALCNHSGSV-HYGHYTAFCKDQSGWRVFNDSRVSPI------------SENQIP 610
Query: 441 SETGYILFYQ 450
S GY+LFY+
Sbjct: 611 SSEGYVLFYE 620
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHIN-EVILSERPQ----SNAK--SKLSAPDGGGGDNHSSSGF 126
F Y QQDA EFL FL++ ++ E+ R S+AK S L + D ++ +
Sbjct: 364 FTGYSQQDAQEFLKFLMDRLHVEINRKGRKSPCILSDAKWPSVLEDSETLSDDEQANQMW 423
Query: 127 E-----EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ------NTSITQC 175
+ E + + ++F G L S KC C S+ E F DL + I + S+ C
Sbjct: 424 KRYLEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLLDC 483
Query: 176 LRGFSSTETLCSDNKFKCDNC 196
F+ E L S+N CD C
Sbjct: 484 FNLFTKEEELDSENAPVCDKC 504
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 53/327 (16%)
Query: 63 ILELDLCSSDEFDN-----YMQQDAHEFLN------FLINHINEVILSERPQSNAKSKLS 111
+LEL+LC +D DN + + D + + F I E L + SN +L+
Sbjct: 154 LLELNLCENDNMDNVVTRHFSKADTIDTIEKEMRTLFNIPSEEETRLWNKYMSNTYEQLN 213
Query: 112 APDGGGGDNHSSSGFEEPTWVHEIFQ--GILTSETKCLNCETVSSKDEDFFDLQVDIKQN 169
PD D + F+ V E G + T S++ F + N
Sbjct: 214 KPDSTVQD---AGLFQGQVLVIERKNEDGTWPRQASHPKSSTTPSRN---FTTSPKLSSN 267
Query: 170 TSI------TQCLRGFSSTETLCSDNKFKCDNCAS---YQEAQG-PNISALEKEIGPDRF 219
+S + C G++ + S N++ N S Y+E+Q P +
Sbjct: 268 SSPAVTNGDSNCSPGYTLNNSTSSSNRYGGYNSYSSYNYRESQSQPGLC----------- 316
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKNKETLLSCLADLF 276
GL N GNTC+ NS LQ L P + L +Y+A+ N++N + +A+ +
Sbjct: 317 -------GLSNLGNTCFMNSALQCLSNASPLTEYFLTDQYEAEINRENPLGMRGEIAEAY 369
Query: 277 HNIATHK--KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ + +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK
Sbjct: 370 ADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKK 429
Query: 335 PMILALHLKRFKYMDKMNRHVKVSHRV 361
P LAL + + + + +HR+
Sbjct: 430 PY-LALRDAEGRPDEIVAKEAWTNHRL 455
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 863 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPIRDLNMSEFVCDPKAGPYIYDLIAVSN 918
Query: 391 HCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V S ED Q ++ Y+LF
Sbjct: 919 HYGGM-GGGHYTAYGKNKVDGKWYYFDDSSV----SSATED--------QIVTKAAYVLF 965
Query: 449 YQSRD 453
YQ RD
Sbjct: 966 YQRRD 970
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 190 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 231
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 232 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 291
Query: 194 DNC 196
C
Sbjct: 292 GVC 294
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 118 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 176
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 177 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 218
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ K + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 193
>gi|367027774|ref|XP_003663171.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
gi|347010440|gb|AEO57926.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
Length = 1536
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ + + L ++A+ + N + LS L +
Sbjct: 421 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTHEAQKEINPDNPLSHNGEVAAAYGRLLEE 480
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ + A GSIAP+ F + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 481 IYRDPAP-----GSIAPRHFKAVIGRYASAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 535
Query: 335 PMI 337
P I
Sbjct: 536 PYI 538
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 33/173 (19%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++F Q+DAHEFL L++ + L R G D + + E T
Sbjct: 230 GEKFRRGRQEDAHEFLRHLVDKMAGSYLERR---------------GVDPFAPNRLAETT 274
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ---------NTSITQCLRGFSS 181
+H +F G L S+ KC C S + F DL +++++ S+ LR F++
Sbjct: 275 PIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTA 334
Query: 182 TETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNT 234
ETL + N++KC C EA+ N+S + PPN F L FG T
Sbjct: 335 PETLGAGNEWKCGGCNKLVEAE-KNLSVFK--------PPNALVFQLKRFGFT 378
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 24/121 (19%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVL-----------------EYKAKNKKNKETL 268
GL N GNTCY NS+LQ L + P +L + ++ +
Sbjct: 134 VGLENMGNTCYLNSILQCLSYVPPLAQHLLNGSYSQGSHATCSESPFSFNGSTDFCEDDI 193
Query: 269 LSCLADLFHNIATHKKKVGS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
L + L I H+ K GS I P+ F LRK ++F Q+DAHEFL L++
Sbjct: 194 LGAMQKLVGQI--HQTKSGSAEQQAIRPRTFSDNLRKIGEKFRRGRQEDAHEFLRHLVDK 251
Query: 324 I 324
+
Sbjct: 252 M 252
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 23/127 (18%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM--Y 383
EK + V K P L LKRF + N KV + F +L L + P+R Y
Sbjct: 356 EKNLSVFKPPNALVFQLKRFGFT---NGPRKVKDHISFGDKLNL-----EVSGPERWANY 407
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L VV+H G + GHY + V+S W +D VV K+ T+ +
Sbjct: 408 DLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTV------------LRD 455
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 456 KAYVLFY 462
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 193
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHT----QATTLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ K + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 193
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + ++DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQKEDAHEFLMFTLNAVQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C +VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P++ + F + ++DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPREDLL------AGFHRHQKEDAHEFLMFTLNAVQQGCLSASQ 193
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGP 396
+L L LKRF + R + V +P L L + + Y L AV++H G
Sbjct: 287 VLVLVLKRFTLVSGAKR----AQEVRYPQCLDLQPYTSERKAGPLGYVLYAVLVHSGWSC 342
Query: 397 NRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
RGHY V++ + W DD V D++ S++ Y+LFY
Sbjct: 343 ERGHYFCYVRAGNGQWYKMDDAKVTACDETAAL------------SQSAYVLFY 384
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ F L + P+ +Y+L
Sbjct: 402 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCFLLEPENSRPENCLYDLA 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 460 AVVVHHGSGVGSGHYTAYAAHEGRWFHFNDSTVTLTDEETV------------LRAKAYI 507
Query: 447 LFY 449
LFY
Sbjct: 508 LFY 510
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + + S L + G T V
Sbjct: 254 FRGYQQQDAHEFMRYLLDHLHRELQGGFNGVSRSSVLLQENSGLSAGGRCCINGASTVVT 313
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSITQCLRGF 179
IF GIL +E CL C T S K + F DL +DI ++ CLR F
Sbjct: 314 AIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRDCLRSF 373
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 374 TDLEELDETELYMC 387
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNGVSLV 220
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++ +
Sbjct: 221 EEFRKTLCALWQGSQAAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHRE 276
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 193
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 100 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTIIR 141
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 142 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 201
Query: 194 DNC 196
C
Sbjct: 202 GVC 204
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 28 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 86
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 87 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 128
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 112 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 153
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 154 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 213
Query: 194 DNC 196
C
Sbjct: 214 GVC 216
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 40 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 98
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 99 GEV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 140
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGP 396
+L L LKRF + R + V +P L L + + Y L AV++H G
Sbjct: 234 VLVLVLKRFTLVSGAKR----AQEVRYPQCLDLQPYTSERKAGPLGYVLYAVLVHSGWSC 289
Query: 397 NRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
RGHY V++ + W DD V D++ S++ Y+LFY
Sbjct: 290 ERGHYFCYVRAGNGQWYKMDDAKVTACDETAA------------LSQSAYVLFY 331
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 604 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 661
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 662 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETVVK------------AKAYI 709
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 710 LFYVEHQAKAGSD 722
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 457 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 511
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 512 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 567
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 568 LRDCLRSFTDLEELDETELYMC 589
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N++LQ+L R V E++ L L+ T
Sbjct: 402 GLRNLGNTCFMNAILQSL------RSLVEEFRKT-----------LCALWQGSQT----- 439
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 440 -AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 477
>gi|242011010|ref|XP_002426250.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212510313|gb|EEB13512.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 511
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 26/142 (18%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRH--VKVSHRVVFP---LELRLFHLSD-----DAVNPD 380
+++LP +L LHLKRF++ N H K+ +VFP L++ F LS+ +
Sbjct: 386 IRRLPNVLCLHLKRFRW----NSHFRTKIDTEIVFPTTALDMSQFVLSNIHETRQSGAGT 441
Query: 381 RMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
+Y+L AV++H GSG GHY + + W F+D V Q+T+ +
Sbjct: 442 NLYDLAAVIVHHGSGVGCGHYTAFAINDGEWFHFNDSTVRPTGQATV------------A 489
Query: 441 SETGYILFYQSRDSTDARTMNS 462
YILFY R+ T R NS
Sbjct: 490 KCKPYILFYIRREFTLPRVQNS 511
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 15/120 (12%)
Query: 227 GLVNFGNTCYSNSVLQALY----FCKPFRDR-VLEYKAKNKKNKETLLSCLADLFHNIAT 281
GL N GNTC+ N+VLQ+L FC F+ LE +K + S IA
Sbjct: 198 GLRNLGNTCFMNAVLQSLSNIQEFCLYFKQLPSLERNTNGRKVYHSTRSIKEISEELIAE 257
Query: 282 HKKKV----------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
+KV +I+P + + + K F Y QQDAHEFL ++++ ++ + + +
Sbjct: 258 ELRKVLISLNQGDGKEAISPNELFSAIWKVVPRFRGYQQQDAHEFLRYMLDRLHTELLSL 317
>gi|410919011|ref|XP_003972978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Takifugu
rubripes]
Length = 1015
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 217 DRFPPNER--YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLAD 274
D+ P+ER GL N GNTC+ NS +Q L P + L+ K ++ N++ L +
Sbjct: 279 DQSRPSERSGLCGLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMKGE 338
Query: 275 LFHNIATHKKKVGS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ A K++ S + P+ F T++ + +F Y QQD+HE L FL++ ++E
Sbjct: 339 IARAYAELIKQIWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLN 398
Query: 330 KVKKLPMI 337
+++K P I
Sbjct: 399 RIRKKPYI 406
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MY 383
K + + LP +L +HLKRF Y M K+ V FPL R +S+ +NP+ Y
Sbjct: 824 KKLDLWSLPPVLVVHLKRFSYSRYMRD--KLDSLVDFPL--RDLDMSEFLINPNAGPCRY 879
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+L+AV H G GHY + K+ D W FDD V S+ Q S
Sbjct: 880 DLIAVSNHYGGM-GGGHYTAYAKNKDDGKWYYFDDSSVSP------------ASEDQIVS 926
Query: 442 ETGYILFYQSRDST 455
+ GY+LFYQ +D+
Sbjct: 927 KAGYVLFYQRQDTV 940
>gi|218184165|gb|EEC66592.1| hypothetical protein OsI_32808 [Oryza sativa Indica Group]
Length = 788
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK--NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS +Q+L P + L+ ++ N +N L LA F +
Sbjct: 312 GLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELATAFGELLRKLW 371
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G SIAP+ F T+L + +F Y Q D+ E L FL++ ++E +VKK P I A
Sbjct: 372 SAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEA 428
>gi|123976120|ref|XP_001330447.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121896787|gb|EAY01929.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1791
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD-DAVNPDRMYNLVAVV 389
V K PM L L+R+++ + +K++HR+ FP+ LR + P Y L V+
Sbjct: 1153 VSKWPMYLPFVLQRYEFDKNLGSRIKLTHRIEFPIILRCDEIEKITGSRPPEDYELCGVI 1212
Query: 390 IHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDF-FGLTSDHQKSSE------ 442
+H G+ GHYI++V S++ W +D + +ID + I + FG ++ E
Sbjct: 1213 VHSGTA-QSGHYIALVNSNNVWYECNDGDIFEIDITKISELAFGTNDPTERKGETDVVSK 1271
Query: 443 TGYILFYQSR 452
T Y+LFY+ R
Sbjct: 1272 TAYMLFYRQR 1281
>gi|119922836|ref|XP_001254468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 691
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 179 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 220
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 221 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 280
Query: 194 DNC 196
C
Sbjct: 281 GVC 283
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 228 LVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHKK 284
L N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 108 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHAG 166
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 167 EV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 207
>gi|51094457|gb|EAL23716.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1246
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 69 CSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE 128
C + F Q+DAHEFL + ++ + + L N +KL D H+ +
Sbjct: 148 CIARHFRFGNQEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT--- 190
Query: 129 PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
T V +IF G L S KCLNC+ VS + + D+ ++IK S+ + L F E L +
Sbjct: 191 -TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGE 249
Query: 189 NKFKCDNC 196
N +KC C
Sbjct: 250 NSYKCSKC 257
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 74/279 (26%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-----------YKAKNKKNKETLLSCLADL 275
GL N GNTC++N+ LQ L + P + +L ++ N+++ L D
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCIARHFRFGNQEDAHEFLQYTVDA 171
Query: 276 FH-------NIATHKKKVGSIAPKKFITRLRKE---------KDEFDNYM----QQDAHE 315
N + ++ + F LR D FD Y+ + A +
Sbjct: 172 MQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ 231
Query: 316 FLNFLINHI----------NEKCMKVKKL-PM-----------ILALHLKRFKYMDKMNR 353
+N + + KC K KK+ P +L L LKRF
Sbjct: 232 SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG-- 289
Query: 354 HVKVSHRVVFP--LELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDF 410
K++ V +P L++R + +S P +Y L AV++H G + GHY +K S+
Sbjct: 290 --KIAKDVKYPEYLDIRPY-MSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGL 345
Query: 411 WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
W +D +V D ++ S+ Y+LFY
Sbjct: 346 WYQMNDSIVSTSDIRSV------------LSQQAYVLFY 372
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 417 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 474
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 475 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTLTDEETV------------GKAKAYI 522
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 523 LFYVEHQAKAGSD 535
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 63/149 (42%), Gaps = 38/149 (25%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 263 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAMLQEN--SSLSASNKCCINGAS--- 317
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI------------------- 166
T V IF GIL +E CL C T S K + F DL +DI
Sbjct: 318 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 373
Query: 167 --KQNTSITQCLRGFSSTETLCSDNKFKC 193
Q T ++ CLR F+ E L + C
Sbjct: 374 LRAQITLVSDCLRSFTDLEELDETELYMC 402
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 23/99 (23%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N++LQ+L R V E++ L L+ T
Sbjct: 208 GLRNLGNTCFMNAILQSL------RSLVEEFRKT-----------LCALWQGSQT----- 245
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 246 -AFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 283
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 293
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 162
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 163 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 289 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 343
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 344 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 398
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 399 --------LSQQAYVLFY 408
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + I+ + + L N +KL D + + T VH+IF G
Sbjct: 206 QEDAHEFLRYTIDAMQKACL------NGYTKL--------DRQT----QATTLVHQIFGG 247
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCL C+TVS + + D+ +++++ +I + L F E L DN ++C C
Sbjct: 248 YLRSRVKCLECKTVSDTYDPYLDVTLEVERAANIVRALELFVKPEQLGGDNAYRCSMC 305
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 30/146 (20%)
Query: 202 AQGPNISALEKEIGPDRFPPN------ERYF----GLVNFGNTCYSNSVLQALYFCKPFR 251
A G I A +K + FPP ER GL N GNTC+ NS LQ L + P
Sbjct: 92 AAGDGIPAPQKVL----FPPQSLSMKWERVHRVGAGLSNLGNTCFLNSALQCLTYTPPLT 147
Query: 252 DRVLEYKAKNKKNKETLLSCLADLF--------HNIATHKKKVGSIAPKKFITRLRKEKD 303
+ +L ++E +C F H I T +I P I L+K
Sbjct: 148 NYLL--------SREHGRTCAHGSFCMMCTMQNHMIQTFANSGNAIKPLSIIRDLKKISH 199
Query: 304 EFDNYMQQDAHEFLNFLINHINEKCM 329
Q+DAHEFL + I+ + + C+
Sbjct: 200 NLRFGRQEDAHEFLRYTIDAMQKACL 225
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 506 LFYVEHQAKAGSD 518
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|340056831|emb|CCC51170.1| putative ubiquitin hydrolase [Trypanosoma vivax Y486]
Length = 627
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRD--------RVLEYKAKNKKNKETLLSCLADLF- 276
GL N+G+TC+ N+VLQ LY+C R R+ ++ +K+ ++L +AD F
Sbjct: 169 IGLENYGSTCFCNAVLQLLYYCSALRSYLLSLHHRRLKNWRHSTEKDSCSILRLVADFFA 228
Query: 277 --HNIATHKKKVGS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
H + T + S + P + ++ +R+ F+ Q DAHEF FL+N I E + +
Sbjct: 229 KMHRLNTSGMQQKSLLGPSELLSHVRRLSPSFETSRQHDAHEFSMFLLNRIVED--EARI 286
Query: 334 LPMILA 339
LP + A
Sbjct: 287 LPYLGA 292
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
V I G + T C CE VS E+F DL +D+ Q TS+ C+ F + E L DNK
Sbjct: 364 VKSIVGGQFIALTVCCECEHVSVMREEFMDLSLDVAQGTSLRHCMERFGTVEVLDGDNKL 423
Query: 192 KCDNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNF 231
+CD+C AQ + I R P + + L F
Sbjct: 424 QCDHCKKQVVAQ--------RAIRIHRLPQHALFLHLKRF 455
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGL-TSDHQKSS 441
+ L V H GSGP+ GHY + V+ + W FDD V ++ + ++ +G+ T +
Sbjct: 556 FVLRGFVPHRGSGPDAGHYYACVRFGNSWKRFDDKKVSRMTEREVQRCWGVPTITVSTVT 615
Query: 442 ETGYILFYQ 450
T Y+L Y+
Sbjct: 616 STAYLLLYE 624
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 329 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 386
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V ++ T+ YI
Sbjct: 387 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTEEDTV------------VKAKAYI 434
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 435 LFYAERQA 442
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 61/140 (43%), Gaps = 27/140 (19%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVI------LSERPQSNAKSKLSAPDGGGGDNHSSSGFE 127
F Y QQDAHEF+ +L++H++ + +S P S LSA + + S
Sbjct: 182 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSCSPILQENSTLSASNKCCINGAS----- 236
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSIT 173
T V IF GIL +E CL C T S K + F DL +DI S+
Sbjct: 237 --TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVCSLR 294
Query: 174 QCLRGFSSTETLCSDNKFKC 193
CLR F+ E L + C
Sbjct: 295 DCLRSFTDLEELDETELYMC 314
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 89 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 148
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 149 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 202
>gi|119575450|gb|EAW55048.1| ubiquitin specific peptidase 42, isoform CRA_b [Homo sapiens]
Length = 1176
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 18/128 (14%)
Query: 69 CSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE 128
C + F Q+DAHEFL + ++ + + L N +KL D H+ +
Sbjct: 148 CIARHFRFGNQEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT--- 190
Query: 129 PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
T V +IF G L S KCLNC+ VS + + D+ ++IK S+ + L F E L +
Sbjct: 191 -TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGE 249
Query: 189 NKFKCDNC 196
N +KC C
Sbjct: 250 NSYKCSKC 257
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 74/279 (26%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-----------NKKNKETLLSCLADL 275
GL N GNTC++N+ LQ L + P + +L ++ N+++ L D
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCIARHFRFGNQEDAHEFLQYTVDA 171
Query: 276 FH-------NIATHKKKVGSIAPKKFITRLRKE---------KDEFDNYM----QQDAHE 315
N + ++ + F LR D FD Y+ + A +
Sbjct: 172 MQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQ 231
Query: 316 FLNFLINHI----------NEKCMKVKKL-PM-----------ILALHLKRFKYMDKMNR 353
+N + + KC K KK+ P +L L LKRF
Sbjct: 232 SVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG-- 289
Query: 354 HVKVSHRVVFP--LELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDF 410
K++ V +P L++R + +S P +Y L AV++H G + GHY +K S+
Sbjct: 290 --KIAKDVKYPEYLDIRPY-MSQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGL 345
Query: 411 WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
W +D +V D ++ S+ Y+LFY
Sbjct: 346 WYQMNDSIVSTSDIRSV------------LSQQAYVLFY 372
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 506 LFYVEHQAKAGSD 518
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 22/140 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDD-----AVNPDRM 382
+++LP +L LH+KRF++ + K+ R+ FP L++ F L++ + + +
Sbjct: 487 IRRLPNVLCLHIKRFRWNNFY--RTKIDLRIAFPINALDMSQFVLNNGPETRRSNSSCNI 544
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
Y+L AV++H G+G + GHY S ++ W+ F+D V ++ + + +
Sbjct: 545 YDLAAVIVHHGNGSSCGHYTSFAINNGVWMHFNDHTVKEVSSTAVAEC------------ 592
Query: 443 TGYILFYQSRDSTDARTMNS 462
YILFY RD T+A +++
Sbjct: 593 KPYILFYIKRDPTNANRLST 612
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 34/160 (21%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN-HSSSGFE---- 127
+F + Q DAHEFL ++++ ++ +E Q + +L P G N ++ SG
Sbjct: 326 QFRGHRQHDAHEFLRYMLDRLH----TELQQVSFPVELGGPKSGEHKNPYNVSGLSHLQA 381
Query: 128 --EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---------------- 169
+ V +F G+L SE +CL C S K + F DL +DI +
Sbjct: 382 KGRNSIVTNVFGGVLQSEVRCLICGMESKKHDPFLDLSLDIPEKYYSKEHGADGTNGADG 441
Query: 170 -------TSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
I+ CL F+ E L + C++C Q++
Sbjct: 442 GGGAAPVCHISDCLSSFTEVEELAETELYYCNSCKCKQKS 481
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 224 RYFGLVNFGNTCYSNSVLQAL-----YFCKPFRDRVLEYKAKNKK-NKETLLSCLADLFH 277
R GL N GNTC+ NSVLQ+L + C LE K K K + ++ + D+F
Sbjct: 230 RVVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVF- 288
Query: 278 NIATHKKKV------------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ +KV +I+P+ + K +F + Q DAHEFL ++++ ++
Sbjct: 289 -VVEELRKVLLNLSQGGDGSKSAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRLH 347
Query: 326 EKCMKV 331
+ +V
Sbjct: 348 TELQQV 353
>gi|115481222|ref|NP_001064204.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|78707833|gb|ABB46808.1| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
gi|113638813|dbj|BAF26118.1| Os10g0160000 [Oryza sativa Japonica Group]
gi|215767234|dbj|BAG99462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612471|gb|EEE50603.1| hypothetical protein OsJ_30790 [Oryza sativa Japonica Group]
Length = 931
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK--NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS +Q+L P + L+ ++ N +N L LA F +
Sbjct: 312 GLHNLGNTCFMNSAIQSLVHTPPLVEYFLQDYSREINTENPLGLQGELATAFGELLRKLW 371
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G SIAP+ F T+L + +F Y Q D+ E L FL++ ++E +VKK P I A
Sbjct: 372 SAGRTSIAPRPFKTKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKKKPYIEA 428
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 29/147 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMY 383
K + + +LP IL +HLKRF Y M K+ V FP L++ + P +Y
Sbjct: 794 KKLDLWRLPEILVVHLKRFSYSRFMKN--KLDTFVNFPIHDLDMSRYANHSRGDQPP-IY 850
Query: 384 NLVAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L AV+ H G GHY + K D W FDD V + + I +
Sbjct: 851 ELYAVINHYGGM-GGGHYSAYAKLVEEDSWYHFDDSHVSSVGEEDIR------------T 897
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
+ Y+LFY R + S+ C V+
Sbjct: 898 SSAYLLFY--------RRVGSSSCSVS 916
>gi|194376936|dbj|BAG63029.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 41 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 82
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 83 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 140
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 136 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 190
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 191 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 245
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 246 --------LSQQAYVLFY 255
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 356 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 413
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 414 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 461
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 462 LFYVEHQAKAGSD 474
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 209 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 263
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 264 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 319
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 320 LRDCLRSFTDLEELDETELYMC 341
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 175
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 176 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 229
>gi|432953305|ref|XP_004085340.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like, partial
[Oryzias latipes]
Length = 786
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Query: 217 DRFPPNER--YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLAD 274
D+ P+ER GL N GNTC+ NS +Q L P D L+ K ++ N++ L +
Sbjct: 22 DQSRPSERSGLCGLSNLGNTCFMNSAVQCLSNTPPLTDYFLKDKYTDELNEDNPLGMKGE 81
Query: 275 LFHNIATHKKKVGS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ A K++ S + P+ F T++ + +F Y QQD+HE L FL++ ++E
Sbjct: 82 IARVYAELIKQLWSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLN 141
Query: 330 KVKKLPMI 337
+++K P I
Sbjct: 142 RIRKKPYI 149
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MY 383
K + + LP +L +HLKRF Y M K+ V FP LR +S+ +NP+ Y
Sbjct: 567 KKLDLWSLPPVLVVHLKRFSYSRYMRD--KLDSLVDFP--LRDLDMSEFLINPNAGPCRY 622
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+L+AV H G GHY + K+ D W FDD V S+ Q S
Sbjct: 623 DLIAVSNHYGGM-GGGHYTAYAKNKDDGKWYNFDDSSVSP------------ASEDQIVS 669
Query: 442 ETGYILFYQSRDST 455
+ Y+LFYQ +D+
Sbjct: 670 KAAYVLFYQRQDTV 683
>gi|260946429|ref|XP_002617512.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
gi|238849366|gb|EEQ38830.1| hypothetical protein CLUG_02956 [Clavispora lusitaniae ATCC 42720]
Length = 515
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 17/127 (13%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS---DDAVNPDRMY 383
+ +++K LP ++++ LKRFK+ + K+ RV PL L L + DD ++ +++Y
Sbjct: 397 RALRIKALPPVISIQLKRFKHTVGSDTASKIEARVDAPLFLNLSKYASQHDDDIDANKVY 456
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AVV H GS + GHYI++VKS W FDD V+ L S + +
Sbjct: 457 ELFAVVNHVGS-VSTGHYIALVKSSGGRWFKFDDSVI------------SLVSHEEVQAT 503
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 504 NAYLLFY 510
>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 24/138 (17%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ F I+ + L E GG+ +E T +H IF G
Sbjct: 205 QEDAHEFMRFAIDSMQSTCLDEF---------------GGEKAVDPATQETTLIHHIFGG 249
Query: 139 ILTSET-KCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNC 196
L S+ KC+ C S++ E DL V+I S+ + F++ E L DNK+KCD C
Sbjct: 250 HLQSQVVKCMECHHESNRYESMMDLAVEIHGVVESLEDAIAQFTAAEMLDGDNKYKCDRC 309
Query: 197 ASYQEA-------QGPNI 207
+Y A + PNI
Sbjct: 310 NAYVRAGKRLTVHEAPNI 327
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GLVN GN+C++N VLQ L + +P +L ++ K+N + +L ++ ++
Sbjct: 123 GLVNCGNSCFANVVLQCLTYTRPLTAYLLNDSHREVCKRNDWCF---MCELQSHVRKVRE 179
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P + ++R+R Q+DAHEF+ F I+ + C+
Sbjct: 180 TQNPFSPIRILSRIRSIGSHLGYGKQEDAHEFMRFAIDSMQSTCL 224
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ V + P IL + LKRF+ + K++ RV FP L + + +Y L AV
Sbjct: 319 LTVHEAPNILTIALKRFQ----SGKFGKLNKRVTFPKTLDMSPYMSGTNDDSPLYGLYAV 374
Query: 389 VIHCG--SGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
V+H + GHYI VK S+ W DD V +++ + ++ Y
Sbjct: 375 VVHVDLLNASFFGHYICYVKDSNGVWYKIDDSKVKEVELEKV------------LAQKAY 422
Query: 446 ILFY 449
+LFY
Sbjct: 423 MLFY 426
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 401 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKWYLLEPENSGPESCLYDLA 458
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 459 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 506
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 507 LFYVEHQAKAGSD 519
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 51/131 (38%), Gaps = 24/131 (18%)
Query: 74 FDNYMQQDAHEF--LNF---LINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEE 128
F Y QQDAHEF L F + + V Q + L + +S
Sbjct: 253 FRGYQQQDAHEFNALPFGPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGAS---- 308
Query: 129 PTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQ 174
T V IF GIL +E CL C T S K + F DL +DI S+
Sbjct: 309 -TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 367
Query: 175 CLRGFSSTETL 185
CLR F+ E L
Sbjct: 368 CLRSFTDLEEL 378
>gi|330791239|ref|XP_003283701.1| hypothetical protein DICPUDRAFT_26301 [Dictyostelium purpureum]
gi|325086324|gb|EGC39715.1| hypothetical protein DICPUDRAFT_26301 [Dictyostelium purpureum]
Length = 1003
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLFHLSDDAVNPDRMYNL 385
K +++ P IL +HLKRF+Y +RH K+++ V FPL+ L + L + P +Y L
Sbjct: 881 KKLELWSAPKILVIHLKRFQYTSYTHRHEKINYYVDFPLDNLDISKLVLNKSYPPPVYQL 940
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+ H G GHY S VK+ D W L D ID+ I+ S Y
Sbjct: 941 YAISNHMGVM-GSGHYTSCVKNKDQWYLISDSSYRPIDKLKIK------------SSDAY 987
Query: 446 ILFYQ 450
+LFYQ
Sbjct: 988 VLFYQ 992
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK---NKKNKETLLSCLADLFHNIATHK 283
GL N GNTC+ NS LQ L P + L K NK N + +A+++ +
Sbjct: 333 GLSNLGNTCFMNSSLQCLAHTIPLTEYFLSGKYACDINKTNPLGMKGQIAEIYGKLMKDM 392
Query: 284 KKVGS--IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
S +APK + K +F QQD+ EFL+FL++ ++E KV K P
Sbjct: 393 WTGSSNCVAPKHLKWIIGKYAPQFSGMSQQDSQEFLSFLLDGLHEDLNKVLKKP 446
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL LI + + L +G GG+ +E T++ F G
Sbjct: 552 QEDAHEFLRLLIASMQSICL---------------EGLGGEKKVDPRIQETTFIQHTFGG 596
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDI-KQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCLNC S + E+ DL ++I S+ L F+S E L +N ++C C
Sbjct: 597 RLQSKVKCLNCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCT 656
Query: 198 SYQEA-------QGPNI 207
SY A + PNI
Sbjct: 657 SYVRARKQLSIHEAPNI 673
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+CY+N+VLQ L KP +L Y++ +K + +L +I ++
Sbjct: 470 GLLNCGNSCYANAVLQCLTSTKPLVIYLL-YRSHSKACCAKDWCLMCELEQHIMILRENG 528
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
++P + + +R Q+DAHEFL LI + C++
Sbjct: 529 APLSPSRILWHMRSINCHMGEGSQEDAHEFLRLLIASMQSICLE 572
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + + + P IL + LKRF+ R+ K++ + FP L + + +Y L
Sbjct: 663 KQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLY 718
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHY+S VK W DD V + +Q SE
Sbjct: 719 AVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPV------------LINQVMSEG 766
Query: 444 GYILFY 449
YILFY
Sbjct: 767 AYILFY 772
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 28/138 (20%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHL--------SDDAVNP 379
+++LP +L LH+KRF++ + K+ R+ FP L++ F L S+ + N
Sbjct: 510 IRRLPNVLCLHIKRFRWNNFY--RTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCN- 566
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
+Y+L AV++H G+G + GHY S ++ W+ F+D V ++ + + D
Sbjct: 567 --VYDLAAVIVHHGNGSSCGHYTSFAINNGVWMHFNDHTVKEVSSAAVADC--------- 615
Query: 440 SSETGYILFYQSRDSTDA 457
YILFY RD T+A
Sbjct: 616 ---KPYILFYIKRDPTNA 630
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFR---DRVLEYKAKNKKNK----ETLLSCLADLF 276
R GL N GNTC+ NSVLQ+L + F + + + K K ++ L D+F
Sbjct: 244 RVVGLRNLGNTCFMNSVLQSLSNIQEFSCYFNAMPSLETGKHKQKAYHSRSMKENLDDVF 303
Query: 277 HNIATHKKKV------------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ +KV G+I+P+ + K +F + Q DAHEFL ++++ +
Sbjct: 304 --VVEELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDRL 361
Query: 325 NEKCMKV 331
+ + +V
Sbjct: 362 HTELQQV 368
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 20/91 (21%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------------TS 171
V +F GIL SE +CL C S K + F DL +DI +
Sbjct: 414 VTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYTKESAVDGGGDKDKDAPVCH 473
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
I+ CL F+ E L + C++C Q++
Sbjct: 474 ISDCLSSFTEVEELAETELYYCNSCKCKQKS 504
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 435
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 436 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 483
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 484 LFYVEHQAKAGSD 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 231 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 341
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 342 LRDCLRSFTDLEELDETELYMC 363
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 197
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 251
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 378 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 435
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 436 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 483
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 484 LFYVEHQAKAGSD 496
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 231 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 285
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 286 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 341
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 342 LRDCLRSFTDLEELDETELYMC 363
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 138 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 197
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 198 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 251
>gi|350578536|ref|XP_003121514.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Sus
scrofa]
Length = 182
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 62 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLA 119
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 120 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEDTV------------VKAKAYI 167
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 168 LFYVERQA 175
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMIL 338
S +AP+ F T++ + +F Y QQD+ E L F+++ ++E +VKK P +L
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLL 419
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P MY+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDPSARPYMYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNRFSGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|119929524|ref|XP_001251224.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 490
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 122 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 163
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 164 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 223
Query: 194 DNC 196
C
Sbjct: 224 GVC 226
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 228 LVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHKK 284
L N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 51 LQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHAG 109
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P+K + F + Q+DAHEFL F +N + + C+ +
Sbjct: 110 EV--IRPRKDLL------AGFHRHQQEDAHEFLMFTLNAMQQGCLSASQ 150
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 61/126 (48%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ H +E T + ++F G
Sbjct: 518 QEDAHEFLRHLVMSMQAACL---------------DGLGGEKHVEPSLQETTLIQQMFGG 562
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L +N +KC C
Sbjct: 563 RLKSKVKCLRCLHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCC 622
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 623 AYVKAR 628
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GN+CY+N+VLQ L KP +L +K L C +L +T ++
Sbjct: 437 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSKNGCLMC--ELEQYASTLRESG 494
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 495 GPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACL 537
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 629 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPEMLDMVPFVTGAGDHPPLYFLY 684
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 685 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAV------------SPNQVMSEG 732
Query: 444 GYILFY 449
Y+LFY
Sbjct: 733 AYMLFY 738
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 17/125 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L R + AK K +E T+VH +F G
Sbjct: 272 QEDAHEFLRLLVEAMQNGALQGRAE-KAKQKQ----------------KESTFVHRMFGG 314
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S C +C T S ++F DL +DI Q S++ L+ + + L N++KCD C
Sbjct: 315 KLRSRVVCEHCNTPSDTFDNFLDLSLDISQANSVSSALKAYHKFDRLRGANQYKCDKCKC 374
Query: 199 YQEAQ 203
++A+
Sbjct: 375 LRDAK 379
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 65/132 (49%), Gaps = 24/132 (18%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVF--PLELRLFHLSDDAVNPDRMY 383
+K M V P IL LHLKRF + R K++ RV F L+L+ ++ + Y
Sbjct: 379 KKSMSVFSAPPILTLHLKRFNF-----RGRKINKRVNFEDSLDLKPAMSNESDIT---GY 430
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKI-DQSTIEDFFGLTSDHQKSS 441
L AVV H G GHY + VK S+ W + DD V+ I D T+ L ++H
Sbjct: 431 KLYAVVCHRGQSNKSGHYYAHVKASNGKWYVADDSTVESISDSRTV-----LANEH---- 481
Query: 442 ETGYILFYQSRD 453
YILFY +RD
Sbjct: 482 --AYILFY-ARD 490
>gi|213405707|ref|XP_002173625.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212001672|gb|EEB07332.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 524
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLEL----RLFHLSDDAVNPDRMYNLV 386
++KLP +L LHLKRF Y D+ +K + + +PL L R+ + P R Y L
Sbjct: 395 IEKLPAVLILHLKRFLYDDQAGGTLKNTKLISYPLRLEIPTRVISPGKRPLGPAR-YQLT 453
Query: 387 AVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIE--DFFGLTSDHQKSSE 442
AVV H G GHY V HD W+ DD + I +S +E + + S
Sbjct: 454 AVVYHHGLSAQGGHYTVDVHQHDGSSWIRIDDTTIRTISESDVEVTENEATVNSSASSDR 513
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 514 CAYLLFY 520
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 13/119 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK-----KNKETLLSCLADL---FHN 278
G VN N C+ NS+ QAL +C PF VL K ++K +LL + L F
Sbjct: 161 GFVNTSNMCFMNSIFQALLYCVPF--YVLMRNLGKKLPRLFRDKGSLLGSVITLTQEFRE 218
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYM---QQDAHEFLNFLINHINEKCMKVKKL 334
++ G + + R+ K FD Q+DA EFLN ++ ++E+ ++ L
Sbjct: 219 NWQPGEEEGDAYIPEVVYRVMKNNPRFDLVQTGEQEDAEEFLNLFLDEMHEEFVRTGNL 277
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + ++DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 165 FHRHQKEDAHEFLMFTLNAVQQGCLSA----------SQPSG-----HAS---EDTTVIR 206
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C +VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 207 QIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 266
Query: 194 DNC 196
C
Sbjct: 267 GVC 269
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN---KKNKETLLSCLADLFHNIATHK 283
GL N GNTCY N+ LQ L P ++ + ++ TL + A + + H
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTRAL-LHA 151
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+V I P++ + F + ++DAHEFL F +N + + C+ +
Sbjct: 152 GEV--IRPREDLL------AGFHRHQKEDAHEFLMFTLNAVQQGCLSASQ 193
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|190347225|gb|EDK39462.2| hypothetical protein PGUG_03560 [Meyerozyma guilliermondii ATCC
6260]
Length = 516
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 15/127 (11%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K +K+KKL +L++ LKRF++ + KV V P+ L + + D +Y L
Sbjct: 401 KSLKIKKLAPVLSIQLKRFEHNKSNDGSSKVETPVSIPIYLDISKYTSDE-KATNIYELF 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV H GS N GHYI +VK + WL FDD V+ I +S + SS GY
Sbjct: 460 AVVCHVGS-VNTGHYIVVVKDGEGRWLKFDDSVISLIAESEV------------SSMNGY 506
Query: 446 ILFYQSR 452
+LFY S
Sbjct: 507 LLFYISH 513
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 27/165 (16%)
Query: 44 FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQ 103
F+ TS++ G+ + +L + + +QDAHE FL+N ++ S+ +
Sbjct: 256 FYTSTSIE-----GYGMTNLLMTAWYKNKSLAGFEEQDAHELWQFLLNELH----SDHER 306
Query: 104 SNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
S +S H S H F G L S +C NC+ + + DL
Sbjct: 307 SLQRS----------SQHESEQNMCQCITHSTFSGTLASSIQCQNCQETTETVDPMIDLS 356
Query: 164 VDI-----KQNTS-ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
++I KQ T+ + CL F+S+E L D + C +C EA
Sbjct: 357 LEIGRLKNKQKTANLYDCLDRFTSSEKL--DVMYTCHHCGEKSEA 399
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLRN--KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AV +H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVFVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F Y QQDAHEF+ +L++H++ + L ++S + + N+ T V
Sbjct: 253 FRGYRQQDAHEFMRYLLDHLH-LELQGGFNGVSRSAILQENSTLSANNKCCINGASTVVT 311
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TSITQCLRGF 179
IF GIL +E CL C T S K + F DL +DI S+ CLR F
Sbjct: 312 TIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSF 371
Query: 180 SSTETLCSDNKFKC 193
+ E L + C
Sbjct: 372 TDLEELDETELYMC 385
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYRQQDAHEFMRYLLDHLH 273
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|66800105|ref|XP_628978.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60462340|gb|EAL60562.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1085
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA 280
P GL N GNTC+ NS LQ L P L + +N NK L C DL + A
Sbjct: 333 PRPGITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYA 392
Query: 281 THKKKV-----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
++ S+ P+KF ++ + +F Y Q D+ E L FL++ ++E KVKK P
Sbjct: 393 ELITEIWEGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGLHEDLNKVKKKP 452
Query: 336 M 336
Sbjct: 453 F 453
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 335 PMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMYNLVAVVIH 391
P IL +HLKRF Y K + K+ V FP L+L + L+ D P +Y+L AV H
Sbjct: 875 PPILVVHLKRFSY--KRSHRDKLDTLVKFPFKDLDLSQYVLNKDQPAP--IYDLFAVSNH 930
Query: 392 CGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
GS GHY + + D W FDD + + ++IE S+ Y+LFY
Sbjct: 931 YGS-LGGGHYTAFALNEPEDTWFKFDDSHASEANINSIE------------SDAAYVLFY 977
Query: 450 QSRDSTD 456
+ +D+ D
Sbjct: 978 RRKDTYD 984
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 5/117 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 271 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 330
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMIL 338
S +AP+ F T++ + +F Y QQD+ E L F+++ ++E +VKK P +L
Sbjct: 331 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLL 387
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 785 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDPSAQPYVYDLIAVSN 840
Query: 391 HCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ W FDD V L S+ Q ++ Y+LF
Sbjct: 841 HYGAM-GVGHYTAYAKNKFSGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 887
Query: 449 YQSRD 453
YQ RD
Sbjct: 888 YQRRD 892
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL +L++ + + L+ P G D E TWV++IF G
Sbjct: 198 QEDSHEFLRYLVDALQKSSLAGLP-------------GKVDPK----VAEKTWVYKIFGG 240
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
+L S CL+C+ S + DL VDI ++ LR F + + L +K+KC+ C
Sbjct: 241 LLRSRVNCLSCDYNSDTYDRMLDLSVDIAGVATLKDALRKFVAVDRLRGADKYKCEKC 298
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 30/135 (22%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL-FHLSDD 375
EKC K + + P++L LHLKRF M + K+ H V +P L L ++SD
Sbjct: 296 EKCKKPVNADKRFTIDEAPVVLTLHLKRFSPMGR-----KIPHPVSYPERLTLQPYMSDG 350
Query: 376 AVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLT 434
P Y+L AV+ H GSGPN GHY + VK + W +D+ V + QS+
Sbjct: 351 KFGPS--YSLYAVISHAGSGPNSGHYYAHVKGGNGTWYEMNDESV--MRQSSAPTNM--- 403
Query: 435 SDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 404 -------RSAYMLFY 411
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA----KNKKNKETLLSCLADLFHNIATH 282
GL N GNTC+ NS LQ L P +L++ + KN + L + I +
Sbjct: 114 GLNNIGNTCFLNSALQCLLHTPPLLHVLLKHSKGEPCRAPKNSYCTICALRQVMTEIFS- 172
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
K + P T+L+ + Q+D+HEFL +L++ + + +
Sbjct: 173 --KSHPVTPYPITTKLQVIAKQMRRGRQEDSHEFLRYLVDALQKSSL 217
>gi|390331847|ref|XP_003723365.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like
[Strongylocentrotus purpuratus]
Length = 1640
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
Y GL N GNTC+ NSVLQ L + +D +L KN+ N++ L L + A +
Sbjct: 765 YCGLDNLGNTCFMNSVLQVLANTRELKDFMLGADFKNEINRDNPLGSGGHLVLSFAVLMR 824
Query: 285 KV-----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
++ SIAP K + + + +F + Q DA EF+ FL++ ++E +++K P
Sbjct: 825 RLWGGQHKSIAPSKLKSIISAKASQFMGFAQHDAQEFMAFLLDGLHEDINRIRKKP 880
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLFHLSDDAVNPDRMYNL 385
K M + +LP L + LKRF + + + R K++ V +P+ L L + +Y+L
Sbjct: 1401 KQMLLWRLPSTLIIQLKRFSFGNMLWRD-KINKMVEYPVRGLDLSPYCHGSHGTPLIYDL 1459
Query: 386 VAVVIHCGSGPNRGHYISIVK----------SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
V+ H G G GHY S + HD W LFDD+ V + + +
Sbjct: 1460 YGVINHHG-GILGGHYTSFGRLASTADWSKNEHD-WRLFDDNHVTTVSEKNV-------- 1509
Query: 436 DHQKSSETGYILFYQSR 452
+ + Y+LFY+ R
Sbjct: 1510 ----VTRSAYLLFYRRR 1522
>gi|324501057|gb|ADY40477.1| Ubiquitin carboxyl-terminal hydrolase 32 [Ascaris suum]
Length = 1248
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 17/133 (12%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDR 381
+K + + +LP IL +H KRF Y+D R +K S V FP L+L + L DA + +
Sbjct: 1130 TKKSLSIWRLPRILIIHFKRFVYVDAERRWMKSSKVVDFPLWDLDLSQWVLDQDAFDSAK 1189
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
YN A+ H G+ + GHY++ ++ D W F+D + +S I+
Sbjct: 1190 -YNCFAIANHYGAMAS-GHYVAYARNRDQWYAFNDSRCQAVKESQID------------K 1235
Query: 442 ETGYILFYQSRDS 454
++ Y+LFY+ D+
Sbjct: 1236 KSAYLLFYERADA 1248
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-----KKNKETLLSCLAD 274
P + G+ N GNTCY NS +Q L KP + +E + K K T+
Sbjct: 564 PSGKGVTGIYNMGNTCYMNSAIQCLSNTKPLTEYFIEGRHKQDMKKLSSTKGTVALEYGS 623
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDE-FDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ + + KK+ +IAP K + F Q D EFL+ L++ ++E +V
Sbjct: 624 VVAELWSGKKR--NIAPIKLRDAISANAGGVFAERTQHDCQEFLSILLDLLHEDLNRVVN 681
Query: 334 LPMI 337
P +
Sbjct: 682 KPYV 685
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|357622636|gb|EHJ74062.1| hypothetical protein KGM_18635 [Danaus plexippus]
Length = 750
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + ++ P L L LK FK+ K+ K+ H V + L + V+P +YNL
Sbjct: 594 ERSVLIETTPKYLILVLKNFKFDSKLQTQTKLMHTVYHNHTVTLPTVRTQPVHP--VYNL 651
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A VIH G+ + GHY ++ K +D W F+DD V D++ + GL+ S T Y
Sbjct: 652 FAAVIHAGTTLDSGHYFTLAKDNDQWHKFNDDEVSFADENLLN---GLS-----RSSTPY 703
Query: 446 ILFYQSRD 453
ILFY+ D
Sbjct: 704 ILFYRRTD 711
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRV-LEYKAKNKKNKETLLSCLADLFHNIATH 282
R GL+N GNTCY NSV+QAL + F V L+ A K ++L + + H+++T
Sbjct: 325 RKVGLLNLGNTCYMNSVMQALLVTRQFSTHVMLKMTAVPYWAKMSIL--FSKMMHSVST- 381
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+ P +F + ++ DN Q D+ EFL +L
Sbjct: 382 -----KLNPDEFFSVVKPPFFTMDN--QHDSSEFLGYL 412
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-----SITQCLRGFSSTET 184
+++ +F G+L + +C C + F DLQ+ + T S+ L + S E
Sbjct: 516 SFIDSMFGGVLLTRVECSVCHATFLSRDVFRDLQLAFPEKTEGCQHSVQSLLEFYCSKER 575
Query: 185 LCSDNKFKCDNCASYQEAQ 203
+ DN+++C +C ++A+
Sbjct: 576 MSGDNQYECRDCGRLRDAE 594
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|297679837|ref|XP_002817723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pongo abelii]
Length = 1176
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 54 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 95
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 96 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 153
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 149 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 203
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 204 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 258
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 259 --------LSQQAYVLFY 268
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 107/276 (38%), Gaps = 72/276 (26%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHK-- 283
GL N GNTC+ NSVLQ+L+ + + ++ L CL D H +
Sbjct: 5 GLHNLGNTCFMNSVLQSLHPPPTAASPAALPILSPSCEDSHEFLRCLLDAMHEACLRRFR 64
Query: 284 --KKVGSIAPKKFITRL----RKEKDEFD--NYMQQDAHEFLNFLINHINE--------- 326
K +A F+ R+ K + E D +Y+ + FL+ + IN
Sbjct: 65 PAKPPPELAATTFVYRIFGGRLKSQIECDGVDYVSRTFDPFLDLSLE-INRAASLERALA 123
Query: 327 -----------------------------KCMKVKKLPMILALHLKRFKYMD---KMNRH 354
K + ++ P +L +HLKRF+Y K+N+H
Sbjct: 124 AFTAAEVLTAPTTSHGRRCGSCASWVRATKRISIEDAPNVLTVHLKRFEYGGFGAKINKH 183
Query: 355 VKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHD-FWLL 413
V F EL L P MY+L V++H G N GHYI VK+ + W +
Sbjct: 184 V------AFGTELNLRPYMSATKGPALMYDLYGVLVHHGYSVNSGHYICYVKAANGLWHV 237
Query: 414 FDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
DD V + + T+ D + YILFY
Sbjct: 238 CDDHRVAAVGERTVLD------------QRAYILFY 261
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 80 QDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGI 139
+D+HEFL L++ ++E L + +L+A T+V+ IF G
Sbjct: 42 EDSHEFLRCLLDAMHEACLRRFRPAKPPPELAAT----------------TFVYRIFGGR 85
Query: 140 LTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS---DNKFKCDNC 196
L S+ +C + VS + F DL ++I + S+ + L F++ E L + + +C +C
Sbjct: 86 LKSQIECDGVDYVSRTFDPFLDLSLEINRAASLERALAAFTAAEVLTAPTTSHGRRCGSC 145
Query: 197 ASYQEA 202
AS+ A
Sbjct: 146 ASWVRA 151
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 116 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 157
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 158 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 215
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 31/111 (27%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL--------SCLADLFHN 278
GL N GNTC++N+ LQ L + P + +L ++ +K K ++L CL F
Sbjct: 48 GLQNLGNTCFANAALQCLTYTPPLANYMLSHE-HSKTCKCSVLCLLCVMIKPCLYQNFTG 106
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
IA H + F N Q+DAHEFL + ++ + + C+
Sbjct: 107 IARHFR--------------------FGN--QEDAHEFLQYTVDAMQKACL 135
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 211 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 265
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 266 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 320
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 321 --------LSQQAYVLFY 330
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEP-IVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|164429141|ref|XP_956165.2| hypothetical protein NCU00480 [Neurospora crassa OR74A]
gi|157072425|gb|EAA26929.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1754
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ L + L ++AK + N + LS L +
Sbjct: 678 VGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAMAYMRLLDE 737
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ N A + S+AP+ F + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 738 IYKNPAPN-----SVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 792
Query: 335 PMI 337
P I
Sbjct: 793 PYI 795
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLF-HLSDDAVNPDRMYNLVAVVI 390
K P IL +HLKRF + R K+ V FP+E L L + D +Y+L+AV
Sbjct: 1385 KTPDILVVHLKRFSSVGW--RRDKLDVLVDFPIEGLDLTERVIDKEDGKQEIYDLIAVDD 1442
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G G GHY + K+ D W F+D V K+ T + S Y+LF
Sbjct: 1443 HWG-GLGGGHYTAFAKNFVDDQWYEFNDSSVSKV-----------TDTSKVVSPAAYLLF 1490
Query: 449 YQSR 452
Y+ R
Sbjct: 1491 YRRR 1494
>gi|350290282|gb|EGZ71496.1| UCH-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 1747
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ L + L ++AK + N + LS L +
Sbjct: 670 VGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAMAYMRLLDE 729
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ N A + S+AP+ F + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 730 IYKNPAPN-----SVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 784
Query: 335 PMI 337
P I
Sbjct: 785 PYI 787
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLF-HLSDDAVNPDRMYNLVAVVI 390
K P IL +HLKRF + R K+ V FP+E L L + D +Y+L+AV
Sbjct: 1377 KTPDILVVHLKRFSSVGW--RRDKLDVLVDFPIEGLDLTERVIDKEDGKQEIYDLIAVDD 1434
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFD-DDVVDKIDQSTIEDFFGLTSDHQKSSETGYIL 447
H G G GHY + K+ D W F+ D V K+ T + S Y+L
Sbjct: 1435 HWG-GLGGGHYTAFAKNFVDDQWYEFNVDSSVSKV-----------TDTSKVVSPAAYLL 1482
Query: 448 FYQSR 452
FY+ R
Sbjct: 1483 FYRRR 1487
>gi|154337046|ref|XP_001564756.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061794|emb|CAM38826.1| putative ubiquitin hydrolase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 740
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 70/138 (50%), Gaps = 13/138 (9%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRV-------LEYKAKNKKNKETLLSCLADLF-- 276
GL N+G+TCY NSV+Q +Y C P R R+ L K K+ ++T+L L +L
Sbjct: 284 LGLENYGSTCYCNSVIQLIYHCTPLRLRLLELHRVYLTKKGKSGFEEDTVLFQLCNLIAV 343
Query: 277 ----HNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
+N K IA K ++ +R + FDN MQQDAHEF FL+N I + ++
Sbjct: 344 MHKSNNRTKGKYPREKIATKDLLSCVRAKNKVFDNDMQQDAHEFTMFLLNDIWDTEQRIM 403
Query: 333 KLPMILALHLKRFKYMDK 350
P + L L+ M K
Sbjct: 404 ADPANVNLFLQYEASMKK 421
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 47/170 (27%)
Query: 74 FDNYMQQDAHEFLNFLINHI---NEVILSERPQSN---------------------AKSK 109
FDN MQQDAHEF FL+N I + I+++ N +K K
Sbjct: 376 FDNDMQQDAHEFTMFLLNDIWDTEQRIMADPANVNLFLQYEASMKKKGLSSFSWKHSKDK 435
Query: 110 -LSAPDGGGGDNHSSS-----------------GFEEP-----TWVHEIFQGILTSETKC 146
+S+ G + +S G ++P T + I QG S T C
Sbjct: 436 SISSHSQKGSKLYKTSLAAATNSNAATDGDKMVGIQKPFSGELTPLQVILQGQFGSLTAC 495
Query: 147 LNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L CE V+++DE F DL ++ +Q +S+ +CL F E +NK +C+ C
Sbjct: 496 LECENVTARDEVFMDLSLETEQGSSLLRCLDHFGDPEYFWGNNKLRCEEC 545
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 70/185 (37%), Gaps = 61/185 (32%)
Query: 327 KCMKVKKLPM-ILALHLKRFKYMDKMNRHVKVSHRVVFPLEL------------------ 367
K + V++LP L +HLKRF+Y K K + V P+++
Sbjct: 553 KTIHVQRLPQYALLIHLKRFQYDVKKQIFTKKADHVALPMQMDVAEYLTDSEVIEQTLRN 612
Query: 368 ----RLFHLSDDAVN----------------PDRM--------------------YNLVA 387
R + SDDA N PD + L
Sbjct: 613 EQARRQKNGSDDAGNNDNSRRKEDGTTADSSPDTFKPASEEVRRKLRGIARHKARFELTG 672
Query: 388 VVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK-SSETGY 445
V H G GPN GHY + V+ W FDD+ V + + ++ +FG+ SD + T Y
Sbjct: 673 FVAHIGEGPNSGHYFTCVRYGPQLWRRFDDETVSTMVERDVKQYFGVPSDAVGVVTATAY 732
Query: 446 ILFYQ 450
IL Y+
Sbjct: 733 ILLYE 737
>gi|336470026|gb|EGO58188.1| hypothetical protein NEUTE1DRAFT_122471 [Neurospora tetrasperma
FGSC 2508]
Length = 1744
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-----------CLAD 274
GL N GNTCY NS LQ L + L ++AK + N + LS L +
Sbjct: 668 VGLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAMAYMRLLDE 727
Query: 275 LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
++ N A + S+AP+ F + + F Y QQD+ EFL FL++ + E ++KK
Sbjct: 728 IYKNPAPN-----SVAPRHFKGIVGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKK 782
Query: 335 PMI 337
P I
Sbjct: 783 PYI 785
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 333 KLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLF-HLSDDAVNPDRMYNLVAVVI 390
K P IL +HLKRF + R K+ V FP+E L L + D +Y+L+AV
Sbjct: 1375 KTPDILVVHLKRFSSVGW--RRDKLDVLVDFPIEGLDLTERVIDKEDGKQEIYDLIAVDD 1432
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G G GHY + K+ D W F+D V K+ T + S Y+LF
Sbjct: 1433 HWG-GLGGGHYTAFAKNFVDDQWYEFNDSSVSKV-----------TDTSKVVSPAAYLLF 1480
Query: 449 YQSR 452
Y+ R
Sbjct: 1481 YRRR 1484
>gi|116207694|ref|XP_001229656.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
gi|88183737|gb|EAQ91205.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
Length = 1550
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GNTCY NS LQ + + L ++A + N + LS D+ ++
Sbjct: 442 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTHEAHKEINPDNPLSHNGDVAAAYGRLLEE 501
Query: 286 V------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
+ GSIAP+ F + + F Y QQD+ EFL FL++ + E ++KK P I
Sbjct: 502 IYKDPAPGSIAPRNFKGIIGRYAPAFSGYGQQDSQEFLGFLLDGLQEDLNRIKKKPYI 559
>gi|123475773|ref|XP_001321062.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121903881|gb|EAY08839.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1146
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK + + P IL L RF Y K +K++ FP E+ + S N Y +
Sbjct: 197 EKSTFISESPQILVFQLMRFYYDKKKKTEMKINDAFYFPSEVDISKCSIGVENTK--YKI 254
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VVIH G+ GHY+SI+K + W F+D++V KI Q ++F LT + K + Y
Sbjct: 255 HGVVIHNGTATG-GHYLSIIKYNGDWYKFNDNIVTKISQ---KEFDNLTIGNPKQRTSAY 310
Query: 446 ILFYQSRD 453
+LFY D
Sbjct: 311 LLFYVRND 318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 227 GLVNFGNTCYSNSVLQALY----FCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATH 282
GL+N GNTCY NS+LQ LY F KPF LE N+ KE L ++F+++A
Sbjct: 30 GLLNLGNTCYMNSILQQLYSLPIFLKPF----LENANSNQGYKE-----LQNIFYSMAFT 80
Query: 283 KKKVGSIAPKKFITR-LRKEKDEFDNYMQQDAHEFLNFLI 321
V + P++FI + + ++ + + + QQDA EF + +
Sbjct: 81 SFPV--VTPEEFIKKFVWRDGTKINIHAQQDAFEFFQYFL 118
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAETYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ +P +Y+L+AV
Sbjct: 816 LPKILVVHLKRFSY----SRYWRDKLDTVVEFPIRGLNMSEFVCDPSARPYVYDLIAVSN 871
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 872 HYGAM-GVGHYTAYAKNKLNRKWYYFDDSNVS------------LASEDQIVTKAAYVLF 918
Query: 449 YQSRD 453
YQ RD
Sbjct: 919 YQRRD 923
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ +E T + ++F G
Sbjct: 526 QEDAHEFLRHLVMSMQAACL---------------DGLGGEKQVEQSLQETTLIQQMFGG 570
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L DN +KC C
Sbjct: 571 RLKSKVKCLRCHHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCC 630
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 631 AYVKAR 636
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFR-DRVLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY+N+VLQ L KP +L +K+ +K L C +L +T ++
Sbjct: 444 GLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDCCSKNWCLMC--ELEQYASTLRES 501
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 502 GGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACL 545
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 637 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPDMLDMVPFVTGAGDHPPLYFLY 692
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 693 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAV------------SLNQVMSEG 740
Query: 444 GYILFY 449
Y+LFY
Sbjct: 741 AYMLFY 746
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F + + + L E S+ +S E+ T +
Sbjct: 153 FHTHQQEDAHEFLMFTLGAMQQACLPEDKPSDPQS------------------EDATLIR 194
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ CL+C+ +SS + + D+ +DI+ S++Q L E L +N + C
Sbjct: 195 QIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPEKLDGENAYHC 254
Query: 194 DNC 196
+ C
Sbjct: 255 NTC 257
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET--LLSCLADLFHNIATHKK 284
GL N GNTCY N+VLQ L + P +L + + K+T +L L H
Sbjct: 81 GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTFCMLCALQAHMTRALCH-- 138
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
P I L + F + Q+DAHEFL F + + + C+
Sbjct: 139 ------PGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACL 177
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL + I+ + + L+ P KL E TWVH+IF G
Sbjct: 780 QEDSHEFLRYAIDALQKACLAGYPP-----KLDP------------KLAETTWVHKIFGG 822
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S CL+C S + DL +DI ++ + + LR F++ + L +K+KC+ C
Sbjct: 823 RLRSRVTCLDCGHNSDTFDSVLDLSIDILGSSGLKEALRKFTAVDHLKGADKYKCEKC 880
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 30/135 (22%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMD-KMNRHVKVSHRVVFPLELRLFHLSDD 375
EKC K V P++L +HLKRF + K+ + VK R L L+ +S
Sbjct: 878 EKCKKAVTADKQFTVHDAPLVLTIHLKRFSPIGGKIGQPVKYDER----LSLQSV-MSSG 932
Query: 376 AVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLT 434
P Y L AV+ H G GPN GHY + VK S+ W +DD V + + G+
Sbjct: 933 QHGPS--YVLYAVISHAGGGPNSGHYYAHVKGSNGQWYEMNDDSVTRHPGAPT----GM- 985
Query: 435 SDHQKSSETGYILFY 449
+ YILFY
Sbjct: 986 -------KNAYILFY 993
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 3/105 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA--THKK 284
GL N GNTC+ NS LQ L P ++ + + C+A ++ +H+K
Sbjct: 696 GLYNTGNTCFLNSALQCLLHTPPLLHVLIAHSKVDPCQVRKGAYCMACGLRSVMFDSHQK 755
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P + + + Q+D+HEFL + I+ + + C+
Sbjct: 756 HR-QFSPSQITSNMHVIAKHMRRGRQEDSHEFLRYAIDALQKACL 799
>gi|166240137|ref|XP_001733062.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988448|gb|EDR41009.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1021
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA 280
P GL N GNTC+ NS LQ L P L + +N NK L C DL + A
Sbjct: 269 PRPGITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYA 328
Query: 281 THKKKV-----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
++ S+ P+KF ++ + +F Y Q D+ E L FL++ ++E KVKK P
Sbjct: 329 ELITEIWEGTYSSVYPRKFKGQIERFAPQFAGYHQHDSQELLAFLLDGLHEDLNKVKKKP 388
Query: 336 M 336
Sbjct: 389 F 389
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 22/127 (17%)
Query: 335 PMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMYNLVAVVIH 391
P IL +HLKRF Y K + K+ V FP L+L + L+ D P +Y+L AV H
Sbjct: 811 PPILVVHLKRFSY--KRSHRDKLDTLVKFPFKDLDLSQYVLNKDQPAP--IYDLFAVSNH 866
Query: 392 CGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
GS GHY + + D W FDD + + ++IE S+ Y+LFY
Sbjct: 867 YGS-LGGGHYTAFALNEPEDTWFKFDDSHASEANINSIE------------SDAAYVLFY 913
Query: 450 QSRDSTD 456
+ +D+ D
Sbjct: 914 RRKDTYD 920
>gi|168051663|ref|XP_001778273.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670370|gb|EDQ56940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 69 CSSDEFDNYMQQDAHEFLNFLINHINEVILS----ERPQSNAKSKLSAPDGGGGDNHSSS 124
C S F + Q+DAHE++ +LI ++ S ER A ++ S+ H
Sbjct: 30 CISKSFRPWRQEDAHEYMRYLIESLDNSCTSAGRGERGVRGAGAQSSSSSSSSSPQH--- 86
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTET 184
P+ + ++F G L S+ KC C T S+ + DL ++I + S+T+ L F++ E
Sbjct: 87 ----PSLIQQMFGGQLRSQVKCTVCSTCSNTYDPLLDLSLEIVRADSLTKALNRFTAVEA 142
Query: 185 LCSDNKFKCDNC 196
L DN++ C C
Sbjct: 143 LEGDNQYHCATC 154
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVI 390
+ K P++L + KRF + K+ ++ F L + + + D Y+L AV++
Sbjct: 166 IDKSPIVLTIQFKRFS-ASGSSSGGKIDKKIDFGRTLAMRPYISNPEDSDANYSLYAVLV 224
Query: 391 HCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
H G + GHY V+ S W DD V ++ + T+ + + YILFY
Sbjct: 225 HAGWSTHSGHYYCFVRTSGGLWHNLDDSRVRQVSEKTVLE------------QKAYILFY 272
Query: 450 QSRDSTDARTMNSN 463
RD ++ ++++
Sbjct: 273 -IRDPPESAALSAD 285
>gi|405970379|gb|EKC35288.1| Ubiquitin carboxyl-terminal hydrolase 19 [Crassostrea gigas]
Length = 1310
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NSVLQAL FRD LE + +N N + L L + A + +
Sbjct: 394 GLDNLGNTCFMNSVLQALSNTTEFRDYFLESRFQNDINTDNPLGMGGKLAVSYAVLLRTL 453
Query: 287 G-----SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
S AP K + + ++ +F+ + Q DA EF+ F ++ ++E ++KK P
Sbjct: 454 WSGKHYSYAPSKLKSLVGQKASQFNGFAQHDAQEFMAFFLDGLHEDLNRIKKKP 507
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 28/141 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLF-HLSDDAVNPDRM 382
K M + +LP L + LKRF + + + R K+ V FP L+L + + D P +
Sbjct: 1064 KQMSIWRLPHTLIIQLKRFSFRNFIWRD-KIDKMVEFPVRGLDLSPYTKIGADKSPP--V 1120
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDF---------WLLFDDDVVDKIDQSTIEDFFGL 433
Y+L AVV H G G GHY S V++ D W L DD V+ I
Sbjct: 1121 YDLYAVVNHYG-GILGGHYTSFVRTPDARDPTKNELDWRLCDDSRVNNI----------- 1168
Query: 434 TSDHQKSSETGYILFYQSRDS 454
+ + S Y+LFY+ R+S
Sbjct: 1169 SGERNVVSRGAYLLFYRKRES 1189
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 381 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 438
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 439 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 486
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 487 LFYVEHQAKAGSD 499
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 234 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 288
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 289 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 344
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 345 LRDCLRSFTDLEELDETELYMC 366
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL I + L+ +PQ KL+ E +WVH++F G
Sbjct: 99 QEDSHEFLRHAIEGLQRSCLAGQPQ-KVDPKLA----------------ETSWVHQLFGG 141
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S C C S + DL +DI + +S+ L+ F + + L +K+KCD+C
Sbjct: 142 QLRSRVHCKGCGHNSDTYDSILDLSLDIHRTSSLKDALKSFVAPDYLKGSDKYKCDHCKK 201
Query: 199 YQEAQGP---NISALEKEIGPDRFPP 221
Y A+ N + L I RF P
Sbjct: 202 YVNAEKRFTINKAPLVLTIHLKRFSP 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 326 EKCMKVKKLPMILALHLKRFK-YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
EK + K P++L +HLKRF + K+ + + ++S+ + P Y+
Sbjct: 206 EKRFTINKAPLVLTIHLKRFSPFGSKLTNLLHYDEHITLKP-----YMSEGSFGPR--YS 258
Query: 385 LVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVV 419
L V+ H GSGPN GHY S VKS W +D+ V
Sbjct: 259 LYGVICHSGSGPNSGHYFSFVKSKQGRWYEMNDESV 294
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L+ P + + K+ ++C + + +
Sbjct: 17 GLFNTGNTCFMNSALQCLFHTPPLLRLLSAHSKDTCKSSGFCMTCCMK-YTAMRSQSSNK 75
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ P L+ Q+D+HEFL I + C+
Sbjct: 76 SAFNPDGITRNLKAFAKSLRYGRQEDSHEFLRHAIEGLQRSCL 118
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|301762222|ref|XP_002916532.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Ailuropoda melanoleuca]
Length = 1186
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 53 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 94
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 95 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 152
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 148 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 202
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 203 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 257
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 258 --------LSQQAYVLFY 267
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHT----QATTLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 650
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE + I+ + V L E GG+ +E T + IF G
Sbjct: 257 QEDAHELMRSAIDMMQSVCLDEF---------------GGEKVVPPRAQETTLIQYIFGG 301
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 302 LLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 198 SYQEA 202
Y +A
Sbjct: 362 DYVKA 366
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 23/128 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + ++ P IL + LKRF+ R K++ R+ FP L V +Y L
Sbjct: 368 KRLSIRCAPNILTIALKRFQ----GGRFGKLNKRISFPETFDLGPYMSSGVEGSDVYKLY 423
Query: 387 AVVIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
AV++H + GHYI VK DF W DD V+K++ +ED S
Sbjct: 424 AVIVHLDMLNASFFGHYICYVK--DFRGNWYRIDDSEVEKVE---LEDVL---------S 469
Query: 442 ETGYILFY 449
+ Y+L Y
Sbjct: 470 QRAYMLLY 477
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK-KNKETLLSCLADLFHNIATHKKK 285
GL N GN+C++N VLQ L + +P +LE K + + + C + + A H +
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFFCEFENHLDRANHSRF 234
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHE + I+ + C+
Sbjct: 235 --PFSPMNIISRLPNIGGNLGYGRQEDAHELMRSAIDMMQSVCL 276
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L + Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLACEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L + Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLACEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 22/131 (16%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ D +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----SRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEDQIVTKAAYVLF 919
Query: 449 YQSRDSTDART 459
YQ RD ++T
Sbjct: 920 YQRRDDEFSKT 930
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L + Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLACEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L + Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLACEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
Length = 440
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 68/152 (44%), Gaps = 28/152 (18%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+D F Y QQDAHEFL F++N ++ KL++ D+ S
Sbjct: 209 NDNFAGYSQQDAHEFLQFILNRLHR-----------DYKLTSTYTNNTDSCS-------C 250
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDED-FFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+H IFQG L S C C S D + DL +DIK ++ QCL F ETL D
Sbjct: 251 LIHSIFQGKLKSSIVCPECHDNSKTVTDPYIDLSLDIKDKATLYQCLDSFHKKETL-HDY 309
Query: 190 KFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
+ C NC + Q+ K++ D+ PP
Sbjct: 310 NYHCPNCDTMQDPI--------KQLTIDKLPP 333
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 16/126 (12%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL-FHLSDDAVNPDRMYNLVA 387
+ + KLP +L L LKRF++++ ++VK++ + FP L + + + N +Y L
Sbjct: 326 LTIDKLPPVLVLQLKRFEHLNN-GQNVKLNAFIEFPTYLNMKKYCHTEENNSSIIYELNG 384
Query: 388 VVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
V+ H G+ N GHYI+ +K + W F+D +V I S+ + + Y+
Sbjct: 385 VISHIGT-VNEGHYIATLKLDSNNWFKFNDSMVTSI------------SEEEVLKDQAYL 431
Query: 447 LFYQSR 452
LFY +
Sbjct: 432 LFYSIK 437
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 14/111 (12%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPF--RDRVLE--YKAKNKKNKETLLSC-----LADLFH 277
G VN G+TC+ +S+LQ L PF ++ + + Y + +N +SC +A+ +
Sbjct: 122 GFVNMGSTCFMSSILQVLIH-NPFIVQNSMSQSHYSSCKIRNPNNCISCALDEIIAESYG 180
Query: 278 NIATHKK-KVGSIAPKKFITRLR---KEKDEFDNYMQQDAHEFLNFLINHI 324
N + K + FI+ L K D F Y QQDAHEFL F++N +
Sbjct: 181 NFVKYNNGKPINQYHDGFISMLNCSWKINDNFAGYSQQDAHEFLQFILNRL 231
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|348681393|gb|EGZ21209.1| hypothetical protein PHYSODRAFT_329215 [Phytophthora sojae]
Length = 1298
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 29/156 (18%)
Query: 67 DLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF 126
+ S+ +N MQQDA EF L+ H+ + G + SS +
Sbjct: 215 EFASTLSLNNVMQQDAQEFSKLLLTHLRAIF--------------------GQSRISSHW 254
Query: 127 EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLC 186
+ V IFQG ++ TKCL C+ S + ++++ ++IK + S+ C+ + S E L
Sbjct: 255 D---LVDRIFQGQMSYVTKCLRCKNKSMRPSSYYEISLNIKGHKSVEDCIGSYLSAEVLE 311
Query: 187 SDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPPN 222
+NK+ C++C S Q A+ E+ P PP
Sbjct: 312 GENKYFCEHCDSKQCAE------RFLELKPRALPPT 341
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE---TLLSCLADLFHNIATHK 283
GL N G TCY NS+LQ L+ PFR V ++ K E + L LF +
Sbjct: 148 GLRNLGATCYLNSMLQCLFVNLPFRRAVYGWEPKQPLTDEEQARTMRALQKLFAQMQLGN 207
Query: 284 KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+ P +F + L +N MQQDA EF L+ H+
Sbjct: 208 ESY--YDPSEFASTL-----SLNNVMQQDAQEFSKLLLTHL 241
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 301 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 360
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 361 WSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 416
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D MY+L+AV
Sbjct: 815 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYMYDLIAVSN 870
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 871 HYGAM-GVGHYTAYAKNKVNGKWYYFDDSSVS------------LASEDQIVTKAAYVLF 917
Query: 449 YQSRD 453
YQ RD
Sbjct: 918 YQRRD 922
>gi|395856541|ref|XP_003800686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Otolemur
garnettii]
Length = 936
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 816 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDLIAVSN 871
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 872 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEEQIVTKAAYVLF 918
Query: 449 YQSRDSTDART 459
YQ RD +T
Sbjct: 919 YQRRDDEFCKT 929
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKNKETLLSCLADLFHNIATHK 283
GL N GNTC+ NS LQ L P + L +Y+A+ N++N + +A+ + ++
Sbjct: 321 GLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQM 380
Query: 284 --KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+ +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P LAL
Sbjct: 381 WLSRSSYVAPRSFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY-LALR 439
Query: 342 LKRFKYMDKMNRHVKVSHRV 361
+ + + + +HR+
Sbjct: 440 DAEGRPDEIVAKEAWTNHRL 459
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 867 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPIRDLNMSEFVCDPKASPYIYDLIAVSN 922
Query: 391 HCGSGPNRGHYISIV--KSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V S+ Q ++ Y+LF
Sbjct: 923 HYGGM-GGGHYTAYGKNKADGKWYYFDDSSVSS------------ASEDQIVTKAAYVLF 969
Query: 449 YQSRD 453
YQ RD
Sbjct: 970 YQRRD 974
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 24 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 83
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 84 WSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 139
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 538 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 593
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 594 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEDQIVTKAAYVLF 640
Query: 449 YQSRD 453
YQ RD
Sbjct: 641 YQRRD 645
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 22/131 (16%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 769 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDLSARPYVYDLIAVSN 824
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 825 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEEQIVTKAAYVLF 871
Query: 449 YQSRDSTDART 459
YQ RD +T
Sbjct: 872 YQRRDDEFCKT 882
>gi|440897206|gb|ELR48950.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, partial
[Bos grunniens mutus]
Length = 334
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F +N + + LS S P G H+S E+ T +
Sbjct: 69 FHRHQQEDAHEFLMFTLNAMQQGCLSA----------SQPSG-----HAS---EDTTVIR 110
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ +CL C VS + + D+ +DI S+ Q LR E L +DN + C
Sbjct: 111 QIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDC 170
Query: 194 DNC 196
C
Sbjct: 171 GVC 173
>gi|342865976|gb|EGU71977.1| hypothetical protein FOXB_17538 [Fusarium oxysporum Fo5176]
Length = 1647
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS-------CLADLFHN 278
GL N GNTCY NS LQ + + L + ++ NK LL +L
Sbjct: 613 VGLQNLGNTCYMNSALQCVRSVEELTKYFLTNEYLDEVNKTNLLGYNGKVAITYGNLLKE 672
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
I T + GS+ P+ F + + + F Y QQD+ EFL FL++ + E +VKK P I
Sbjct: 673 IYTEGR--GSVTPRDFKNTIGRCRSTFSGYGQQDSQEFLGFLLDALQEDLSRVKKKPYI 729
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 339 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 398
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 399 WSGRDSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 454
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D MY+L+AV
Sbjct: 853 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYMYDLIAVSN 908
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 909 HYGAM-GVGHYTAYAKNKVNGKWYYFDDSSV------------SLASEDQIVTKAAYVLF 955
Query: 449 YQSRD 453
YQ RD
Sbjct: 956 YQRRD 960
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHEFL F + + + L E S+ +S E+ T +
Sbjct: 153 FHTHQQEDAHEFLMFTLGAMQQACLPEDKPSDPQS------------------EDATLIR 194
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
+IF G S+ CL+C+ +SS + + D+ +DI+ S++Q L E L +N + C
Sbjct: 195 QIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPEKLDGENAYHC 254
Query: 194 DNC 196
+ C
Sbjct: 255 NTC 257
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA 280
P+ GL N GNTCY N+VLQ L + P +L + + K+T + +
Sbjct: 75 PSVVGAGLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTFC-----MLCALQ 129
Query: 281 THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
H + P I L + F + Q+DAHEFL F + + + C+
Sbjct: 130 AHMTR-ALCHPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACL 177
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + + P +L L LKRF +K++R +V +P L+L+ + LS P
Sbjct: 238 KTLHIHSAPKVLLLVLKRFSAFMGNKLDR------KVSYPEFLDLKPY-LSQPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY S VK+ H W DD V D +++ +
Sbjct: 290 YALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLN------------ 337
Query: 442 ETGYILFY 449
E Y+LFY
Sbjct: 338 ENAYVLFY 345
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 61/128 (47%), Gaps = 25/128 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + + P +L L LKRF +K++R +V +P L+L+ + LS P
Sbjct: 238 KTLHIHSAPKVLLLVLKRFSAFMGNKLDR------KVSYPEFLDLKPY-LSQPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY S VK+ H W DD V D +++ +
Sbjct: 290 YALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLN------------ 337
Query: 442 ETGYILFY 449
E Y+LFY
Sbjct: 338 ENAYVLFY 345
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKN----KETLLSCLADLFHNI 279
GL N GNTC+ NS LQ L P D L EY+A+ N+ N K + A+L +
Sbjct: 234 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIRQM 293
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
+ ++ +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 294 WSGRE--AHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 349
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 753 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRALNMSEFVCDLSARPYVYDLIAVSN 808
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 809 HYGAM-GVGHYTAYAKNKLNGRWYYFDDSNVS------------LASEDQIVTKAAYVLF 855
Query: 449 YQSRD 453
YQ RD
Sbjct: 856 YQRRD 860
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + L+ + + + N+E L ++ A K++
Sbjct: 322 GLSNLGNTCFMNSALQCLSNAPPLTEYFLDDQYEAEINRENPLGMRGEIAEAYADLVKQM 381
Query: 287 -----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
+AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 382 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 437
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 56/125 (44%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+L+AV
Sbjct: 864 LPRILVVHLKRFSY----NRCWRDKLDTVVDFPIRDLNMSEFVCDPKASPYIYDLIAVSN 919
Query: 391 HCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ W FDD V +D Q ++ Y+LF
Sbjct: 920 HYGGM-GGGHYTAYAKNKLDGKWYYFDDSSVSS------------ATDDQIVTKAAYVLF 966
Query: 449 YQSRD 453
YQ RD
Sbjct: 967 YQRRD 971
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 327 KCMKVKKLPMILALHLKRFK-YMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMY 383
K + + P +L L LKRF +M K+ +V +P L+L+ + LS P Y
Sbjct: 238 KTLHIHSAPKVLLLVLKRFSAFMGN-----KLDRKVSYPEFLDLKPY-LSQPTGGP-LPY 290
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G+ + GHY S VK+ H W DD V D +++ + E
Sbjct: 291 ALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLN------------E 338
Query: 443 TGYILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY + +++ + RV+
Sbjct: 339 NAYVLFYVQQTDLKQVSIDMPEGRVH 364
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 814 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 869
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 870 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSSV------------SLASEDQIVTKAAYVLF 916
Query: 449 YQSRD 453
YQ RD
Sbjct: 917 YQRRD 921
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 151 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 208
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 209 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 256
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 257 LFYVEHQAKAGSD 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 4 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 58
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 59 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 114
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 115 LRDCLRSFTDLEELDETELYMC 136
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 85/184 (46%), Gaps = 31/184 (16%)
Query: 35 EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHIN 94
E RI +S T +KIS C I ++ F Q+DAHEFL ++I+ +
Sbjct: 79 EKRIARSLSVDLTTDAPNKIS---SCLKIF------AEHFKLGRQEDAHEFLRYVIDACH 129
Query: 95 EVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSS 154
L + + K + P F T V EIF G L S+ KCL+C S+
Sbjct: 130 NTSLRLK---KLRIKGNEP------------FNGNTVVKEIFGGALQSQVKCLSCGAESN 174
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA-------QGPNI 207
K ++ D+ ++I ++S+ + ++ F +E L +NK+KC+ C A Q PNI
Sbjct: 175 KADEIMDISLEILHSSSVKESMQKFFQSEILDGNNKYKCETCEKLVTARKQMSILQAPNI 234
Query: 208 SALE 211
++
Sbjct: 235 LVIQ 238
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-------NKKNKETLLSCL 272
PP GL N GNTCY NSVLQ L F P + L +K + + K C+
Sbjct: 22 PP----LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDSYVDGERKRDCPFCI 77
Query: 273 ADLFHNIA-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
+ IA + + + AP K + L+ + F Q+DAHEFL ++I+ + +++
Sbjct: 78 VE--KRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRL 135
Query: 332 KKL 334
KKL
Sbjct: 136 KKL 138
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P IL + LKRF + K+++ + +V L F +S + +P Y
Sbjct: 224 KQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILV----LSNF-MSKASKDPQPEYK 278
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L +++H G P GHY + VK S W +D F L++ + SE
Sbjct: 279 LFGIIVHSGFSPESGHYYAYVKDSLGRWYCCND------------SFVSLSTLQEVLSEK 326
Query: 444 GYILFYQSRDSTDA 457
YILF+ + A
Sbjct: 327 AYILFFSRSNQRPA 340
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L + + + N++ L ++ A K++
Sbjct: 240 GLGNLGNTCFMNSALQCLSNTAPLTDYFLRDEYEAEINRDNPLGMKGEIAEAYAELIKQM 299
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 300 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 355
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y +R+ + V +R ++S+ +P +Y+L+AV
Sbjct: 754 LPKILVVHLKRFSY----SRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 809
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 810 HYGAM-GVGHYTAHAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 856
Query: 449 YQSRD 453
YQ RD
Sbjct: 857 YQRRD 861
>gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1050
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+ N ++DAHEFL ++ + V L E G + S + E+ V
Sbjct: 619 QLGNGREEDAHEFLRHVVETMQSVCLME----------------CGVDASDALKEQTNLV 662
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK-QNTSITQCLRGFSSTETLCSDNKF 191
F G L S+ +C+ C S + E DL V+I+ + TS+ + L+ F+STETL +NK+
Sbjct: 663 GLTFGGYLRSKIQCMKCGGKSERQERMMDLTVEIEGEITSLEEALKQFTSTETLDGENKY 722
Query: 192 KCDNCASYQEAQ 203
C C SY++A+
Sbjct: 723 HCGRCKSYEKAK 734
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 226 FGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKK 284
FGL N GN+CY+N+VLQ L F P +L+ +K+ +K+ +C + I K
Sbjct: 542 FGLTNCGNSCYANAVLQCLVFTPPLTAYLLQGLHSKSCASKKWCFTCEFESL--ILKSKD 599
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
++P +++L+ + N ++DAHEFL ++ + C+
Sbjct: 600 TKFPLSPIGILSQLQSIGSQLGNGREEDAHEFLRHVVETMQSVCL 644
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 275 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 334
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 335 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 390
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ NP +Y+L+AV
Sbjct: 789 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSN 844
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 845 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 891
Query: 449 YQSRD 453
YQ RD
Sbjct: 892 YQRRD 896
>gi|301095072|ref|XP_002896638.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
gi|262108868|gb|EEY66920.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
Length = 2442
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 26/147 (17%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAV-----NPDRMYNL 385
+KKLP L HLKRF++ +K++ + FP+E+ +F + DA MY+L
Sbjct: 1802 IKKLPQTLVCHLKRFEFDYDTMEKMKINDYLEFPMEIDMFPYTSDAGADSGDGKSIMYDL 1861
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-----WLLFDDDVVDKIDQSTI-EDFFGLTSDHQK 439
V VV+H G+ + GHY S +K + WL F+D+++ + D T+ E+ FG QK
Sbjct: 1862 VGVVVHSGTS-DTGHYYSFIKDREATENPRWLEFNDEIIREFDVETMGEECFGGEEVAQK 1920
Query: 440 --------------SSETGYILFYQSR 452
+ Y+L Y+ R
Sbjct: 1921 WNAIQGTYSPLVHMKRRSAYMLIYERR 1947
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL-----EYKAKNKKNKETLLSCLADLF 276
N + GLVN G CY NS++Q L+ F + +L + + K + + L LF
Sbjct: 1601 NTPHVGLVNPGCICYMNSLVQQLFMMPKFSEGLLALDFPQIISDQKSPWQEEVEQLQRLF 1660
Query: 277 HNIATHKKKVGSIAPKKFITRLRKEKD--EFDNYMQQDAHEFLNFLINHI 324
++A ++ S P F R K+ D D ++Q DA EF + L++ +
Sbjct: 1661 VSLAYTNRR--SCDPVAF-ARSHKDMDGNATDVHIQMDADEFFSLLLDRL 1707
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 327 KCMKVKKLPMILALHLKRFK-YMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMY 383
K + + P +L L LKRF +M K+ +V +P L+L+ + LS P Y
Sbjct: 238 KTLHIHSAPKVLLLVLKRFSAFMGN-----KLDRKVSYPEFLDLKPY-LSQPTGGP-LPY 290
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G+ + GHY S VK+ H W DD V D +++ + E
Sbjct: 291 ALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLN------------E 338
Query: 443 TGYILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY + +++ + RV+
Sbjct: 339 NAYVLFYVQQTDLKQVSIDMPEGRVH 364
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYN 384
K + + P +L L LKRF + K+ +V +P L+L+ + LS P Y
Sbjct: 238 KTLHIHSAPKVLLLVLKRFS----ASMGNKLDRKVSYPEFLDLKPY-LSQPTGGP-LPYA 291
Query: 385 LVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AV++H G+ + GHY S VK+ H W DD V D +++ + E
Sbjct: 292 LYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLN------------EN 339
Query: 444 GYILFY 449
Y+LFY
Sbjct: 340 AYVLFY 345
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 193 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 234
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 235 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAPSVNKALEQFVKPEQLDGENSYKCSKC 292
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 110 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 161
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +++ F Q+DAHEFL + ++ + + C+
Sbjct: 162 TQALSNPGDVIKPMFVINEMQRIARHFRFGNQEDAHEFLQYTVDAMQKACL 212
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 288 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANSTGG----KIAKDVKYPEYLDIRPY-M 342
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 343 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 397
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 398 --------LSQQAYVLFY 407
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G+ S+ KCL+C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGLWRSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L EY + + + H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGCKMCAMEAHVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P + +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSQILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 327 KCMKVKKLPMILALHLKRFK-YMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMY 383
K + + P +L L LKRF +M K+ +V +P L+L+ + LS P Y
Sbjct: 238 KTLHIHSAPKVLLLVLKRFSAFMGN-----KLDRKVSYPEFLDLKPY-LSQPTGGP-LPY 290
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G+ + GHY S VK+ H W DD V D +++ + E
Sbjct: 291 ALYAVLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLN------------E 338
Query: 443 TGYILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY + +++ + RV+
Sbjct: 339 NAYVLFYVQQTDLKQVSIDMPEGRVH 364
>gi|47229603|emb|CAG06799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1107
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 6/140 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKNKETLLSCLADLFHNIATHK 283
GL N GNTC+ NS LQ L P + L +Y+A+ N++N + +A+ + ++
Sbjct: 322 GLSNLGNTCFMNSALQCLSNASPLTEYFLNDQYEAEINRENPLGMRGEIAEAYADLVKQM 381
Query: 284 --KKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILALH 341
+ +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P LAL
Sbjct: 382 WLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPY-LALR 440
Query: 342 LKRFKYMDKMNRHVKVSHRV 361
+ + + + +HR+
Sbjct: 441 DAEGRPDEIVAKEAWTNHRL 460
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
F Y QQDAHEF+ +L++ ++ +L+ P N+ S P G + T V
Sbjct: 212 RFRGYQQQDAHEFMRYLLDRLHTELLTLLPYPNSDSPFIGPKG------------KSTIV 259
Query: 133 HEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---------------TSITQCLR 177
IF G+L +E CL C S K + F DL +DI Q +++ CL+
Sbjct: 260 TAIFGGLLQNEVTCLVCGVESKKHDPFLDLSLDIPQQFCTRGVKAKDGEQLRCTLSDCLQ 319
Query: 178 GFSSTETLCSDNKFKCDNCASYQEA 202
F+ E L + C C Q +
Sbjct: 320 SFTELEELEESELYMCSTCKKKQRS 344
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 22/130 (16%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE--------LRLFHLSDDAVNPDRM 382
+++LP +L LH+KRF++ VK+ V FPLE L H + + +
Sbjct: 350 IRRLPNVLCLHIKRFRWQSFFR--VKLETFVEFPLEGLNMHKYILDNLHETRGSGSGSNE 407
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
Y+L AVV+H GSG GHY S + W F+D V + T+ +
Sbjct: 408 YDLAAVVVHHGSGAGSGHYTSYARHEGQWFHFNDSTVTPCEPETV------------AKC 455
Query: 443 TGYILFYQSR 452
YILFY R
Sbjct: 456 KAYILFYIRR 465
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 212 KEIGPDRFPPNERYFGLVNFGNTCYSNSVLQAL----YFCKPFRD---------RVLEYK 258
K+I D R GL N GNTC+ N+VLQ+L FC + +V + +
Sbjct: 106 KKIKKDDRLSKPRSSGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQLPSLEEKVTKVKKIQ 165
Query: 259 AKNKKNKETLLSCLADLFHNI-ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFL 317
+ K E + + +L + A + G+I+P+ + K F Y QQDAHEF+
Sbjct: 166 TRKSKTPEEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFM 225
Query: 318 NFLINHINEKCMKVKKLP 335
+L++ ++ + + + P
Sbjct: 226 RYLLDRLHTELLTLLPYP 243
>gi|403331751|gb|EJY64841.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1425
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL-------ELRLFHLSDDAVNPDR 381
+++ ++P IL +HLKRFK K N K++ V +PL + + ++ P
Sbjct: 1203 IQLSRMPPILIIHLKRFKM--KYNERTKINQFVKYPLLDLDLSKYVSIQEQYENGDQPPP 1260
Query: 382 MYNLVAVVIHCGSGPNRGHYISIVKSHDF--WLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
+Y+L VV H G N GHYIS VK+ WL +DD V+ I +S + + F
Sbjct: 1261 LYDLFGVVNHFG-AINSGHYISYVKNQSLKTWLQYDDSSVEDIQESRVCNPF-------- 1311
Query: 440 SSETGYILFYQSRDSTDA 457
YILFYQ +D ++
Sbjct: 1312 ----AYILFYQRKDVQNS 1325
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|359319450|ref|XP_851968.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Canis lupus
familiaris]
Length = 474
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 345 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 402
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++IED
Sbjct: 403 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIEDVL- 457
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 458 --------DSEGYLLFYHKQ 469
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 193 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 242
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 243 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 296
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 297 SVVNGESHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 341
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 126 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 185
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 186 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 227
>gi|242083438|ref|XP_002442144.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
gi|241942837|gb|EES15982.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
Length = 315
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR--MYN 384
+C+K++ LP ++ LKR+ ++ K K+S FP R L NP Y+
Sbjct: 205 RCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFP---RQLDLGKRLSNPSSSCTYD 261
Query: 385 LVAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKI 422
L A+++H G+G N GHY++ +K S+ W FDD+ V K+
Sbjct: 262 LAAILVHKGTGANSGHYVAHIKDESNGQWWEFDDETVSKL 301
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N G TCY+NS+LQ LY FR + + + K K +L L+ LF + H K+
Sbjct: 25 GLTNLGATCYANSILQCLYMNISFRTGIFSLELEVLK-KHPVLDQLSRLFAQL--HSSKM 81
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
I FI L E DN +QQD+HEFL ++ + E+ + K+P
Sbjct: 82 AFIDSAPFIKAL-----ELDNGVQQDSHEFLTLFLSLL-EQSLSHSKVP 124
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD+HEFL + LS QS + SK+ T V
Sbjct: 94 ELDNGVQQDSHEFLT--------LFLSLLEQSLSHSKVPGAR---------------TIV 130
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+F G ++ T+C +C SSK EDF++L+++IK ++ + L + S E L +N
Sbjct: 131 QHLFCGRVSHVTRCSSCGKDSAASSKMEDFYELELNIKGLNTLEESLNDYFSEEALDGEN 190
Query: 190 KFKCDNCASYQEA 202
++ C++C +A
Sbjct: 191 QYFCESCQKRVDA 203
>gi|410921958|ref|XP_003974450.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 1-like [Takifugu
rubripes]
Length = 800
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRD------RVLEYKAKNKKNKE------------ 266
+ GL N GNTCY NSVLQ LY+C RD ++ + KAK++K +E
Sbjct: 88 FVGLNNLGNTCYLNSVLQVLYYCPGLRDGVKKLHKLSKRKAKSQKEEEKNEQDLPPQVEL 147
Query: 267 -----TLLSCLADLFHNIATHKKKVG---SIAPKKFITRLRKEKDEFDNYMQQDAHEFLN 318
+L+ + L + G + P+K + LR+ ++ Y+Q DA E L
Sbjct: 148 LASFNSLIISIEQLQSGFLLNPDSFGDELATPPRKILHTLRQLNPMYEGYLQHDAQEVLQ 207
Query: 319 FLINHINEKCMKVKK 333
++ +I E C ++K
Sbjct: 208 CILGYIQEACDTIRK 222
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 19/91 (20%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-------------------SI 172
+ +FQG L T+CL CE+ + + EDF D+ V + ++ ++
Sbjct: 418 METLFQGQLVLRTRCLECESFTERREDFQDISVPVLDDSPSSPGDFSSVSPDPKPELKTL 477
Query: 173 TQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
T + F+S E + ++K+ C+ C Y EA+
Sbjct: 478 TWAIGQFASAERIVGEDKYFCETCRHYTEAE 508
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 539 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPTQIVTYDLL 595
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 596 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 652
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 129 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 184
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 185 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 241
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 769 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 824
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 825 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 871
Query: 449 YQSRD 453
YQ RD
Sbjct: 872 YQRRD 876
>gi|431914524|gb|ELK15774.1| Ubiquitin carboxyl-terminal hydrolase 22 [Pteropus alecto]
Length = 525
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 396 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 453
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++IED
Sbjct: 454 ADSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIEDVL- 508
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 509 --------DSEGYLLFYHKQ 520
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 65/165 (39%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL ++ +L + + K NH
Sbjct: 244 LLHLVWTHARHLAGYEQQDAHEFLIAALD-----VLHRHCKGDDNGK-----KANNPNHC 293
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 294 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 347
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 348 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 392
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 237 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 278
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|410980119|ref|XP_003996426.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Felis catus]
Length = 470
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 341 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 398
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++IED
Sbjct: 399 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIEDVL- 453
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 454 --------DSEGYLLFYHKQ 465
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 189 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 238
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 239 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 292
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 293 SVVNGESHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 337
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 122 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 181
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 182 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 223
>gi|357451869|ref|XP_003596211.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355485259|gb|AES66462.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 983
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + + L +G GG+ +E T++ F G
Sbjct: 547 QEDAHEFLRLLVASMQSICL---------------EGLGGERKVDPRLQETTFIQHTFGG 591
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDI-KQNTSITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCLNC S + E+ DL ++I S+ L F+S E L +N ++C C
Sbjct: 592 RLQSKVKCLNCSHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCT 651
Query: 198 SYQEA-------QGPNI 207
+Y A + PNI
Sbjct: 652 AYVRARKQLSIHEAPNI 668
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK--NKETLLSCLADLFHNIATHKK 284
GL+N GN+CY+N+VLQ L KP +L Y + ++ K+ L C +L ++ ++
Sbjct: 465 GLLNCGNSCYANAVLQCLTSTKPLVVYLL-YGSHSESCCAKDWCLMC--ELEQHMMILRE 521
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMK 330
++P + + +R + Q+DAHEFL L+ + C++
Sbjct: 522 IGAPLSPSRILWHMRSINCNMGDGSQEDAHEFLRLLVASMQSICLE 567
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSD---DAVNPDRMYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ D +Y+L+AV
Sbjct: 767 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDLSARPYVYDLIAVSN 822
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 823 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSSV------------SLASEDQIVTKAAYVLF 869
Query: 449 YQSRD 453
YQ RD
Sbjct: 870 YQRRD 874
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + I+ + + LS P+ + +++ + T VH+IF G
Sbjct: 207 QEDAHEFLRYTIDAMQKACLSGYPKLDRQTQAT------------------TLVHQIFGG 248
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KC C++VS + + D+ V+I+Q +I + L F + L +N + C C
Sbjct: 249 YLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSGENAYMCAKC 306
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLF--------HN 278
GL N GNTC+ NS +Q L + P + +L +KE +C F H
Sbjct: 124 GLHNLGNTCFLNSTVQCLTYTPPLANYLL--------SKEHSRTCHQSGFCMICVMQNHI 175
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I +I P FI L+K F Q+DAHEFL + I+ + + C+
Sbjct: 176 IQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACL 226
>gi|392592963|gb|EIW82289.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 503
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + LS P +H E TWVH++F G
Sbjct: 40 QEDAHEFLRYAVDALQRSCLSGYPPKM--------------DHK---LAETTWVHKLFGG 82
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S C +C S + DL +DI + S+ + LR F + E L +K+KC+ C
Sbjct: 83 RLRSRVTCRDCGYNSDTYDRILDLSLDIYGSNSLREALRKFVTVEYLKGQDKYKCEKC 140
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL-FHLSDDAVNPDRM 382
+ EK V + P++L +HLKRF + + K+ H + + L L +S+ + P
Sbjct: 145 VAEKKFNVHEAPVVLTIHLKRFSPLGR-----KIGHFIHYDEHLALQPAMSEGSFGPS-- 197
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVV 419
Y L V+ H G GPN GHY + +KS + W +DD+V
Sbjct: 198 YTLYGVICHAGGGPNSGHYYAYIKSANGQWYEMNDDMV 235
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 63/124 (50%), Gaps = 16/124 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEF+ F+I + +V LS+ P+ G +H S T + IF G
Sbjct: 266 QEDSHEFIRFVIESLQKVCLSKFPK-------------GSISHRDSMT---TVIGSIFGG 309
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
L S+ KC C+ S+ + F DL VDI Q S+T+ L+ F +E L N++KC C
Sbjct: 310 YLRSQVKCSVCQYESNTFDPFMDLCVDINQADSLTKGLQNFVKSEILDGSNRYKCSKCKK 369
Query: 199 YQEA 202
+A
Sbjct: 370 LVKA 373
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GNTC+ NSVLQ L + + ++ + +KN NK + C + H IA+HK
Sbjct: 183 GLNNIGNTCFMNSVLQCLTYSPTLANYMISREHSKNCTNKSFCIFCSLEE-HIIASHKAT 241
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
SI PK+ +RK F Q+D+HEF+ F+I + + C+
Sbjct: 242 GRSITPKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESLQKVCL 285
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 38/154 (24%)
Query: 327 KCMKVKKL------------PMILALHLKRFKYMD----KMNRHVKVSHRVVFPLELRLF 370
KC K KKL P IL + +KRF ++ K+N+H++ F L L
Sbjct: 363 KCSKCKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYGGKVNKHIQ------FEQTLNLS 416
Query: 371 HLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIED 429
A N +Y+L AV++H G N GHY VK ++ W DD +V ++ T+
Sbjct: 417 PYMTQA-NDHSIYDLYAVLVHLGGSTNSGHYYCYVKGTNGIWYNMDDSMVSQVSLQTV-- 473
Query: 430 FFGLTSDHQKSSETGYILFYQSRDSTDARTMNSN 463
G Y+LFY RD+ R++N+N
Sbjct: 474 -LG---------SKAYMLFYSKRDT--ERSINTN 495
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 74 FDNYMQQDAHEFLNFLINHIN-EVILSERPQSNAKS-----KLSAPDGGGGDNHSSSGFE 127
F Y QQDAHEF+ +L++H++ E+ S+A S +LSA DG N ++S
Sbjct: 254 FRGYQQQDAHEFMRYLLDHLHRELQYGRNGASHAASPQDGVRLSAADGKCCINGTAS--- 310
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSIT 173
V IF GIL +E CL C T S K + F DL +DI +++
Sbjct: 311 ---VVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLS 367
Query: 174 QCLRGFSSTETLCSDNKFKCDNCASYQEA 202
CLR F+ E L + C C Q++
Sbjct: 368 DCLRSFTDLEELDETELYFCHKCKKRQKS 396
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
V+KLP +L LHLKRF + + K+ V FPL ++R + L + P+ +Y+LV
Sbjct: 402 VQKLPKVLCLHLKRFHWTAFLRN--KIDTYVEFPLKGLDMRGYLLEPENSLPESCVYDLV 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V LT++ YI
Sbjct: 460 AVVVHHGSGVGSGHYTAYGSHEGCWYHFNDSTVT------------LTNEDAVRKAKAYI 507
Query: 447 LFYQSR 452
LFY R
Sbjct: 508 LFYVER 513
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 21/119 (17%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N++LQ+L + F E A + ++ +T ++H + V
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRSGKTAGR---RMYHTRSQGDSSV 217
Query: 287 G------------------SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
+ +P + K F Y QQDAHEF+ +L++H++ +
Sbjct: 218 SLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHLHRE 276
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 787 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPTQIVTYDLL 843
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 844 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTQVSESTVQNAEAYVLFYRKSSE 900
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 377 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 432
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 433 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 477
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 816 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 871
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 872 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 918
Query: 449 YQSRD 453
YQ RD
Sbjct: 919 YQRRD 923
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
++ F Q+DAHEFL ++I+ + L R + +++ + ++ ++S +
Sbjct: 106 AEHFKGGQQEDAHEFLRYVIDACHNTCL--RLMKLRRKGINSNNKNYDNDTTTSTSTSTS 163
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
V EIF G L S+ KCL+C + S+K ++ D+ +D+ + S+ + ++ F E L +NK
Sbjct: 164 VVKEIFGGTLQSQVKCLSCHSESNKVDEIMDISLDVLHSNSLREAMQKFFQPEILDGNNK 223
Query: 191 FKCDNCASYQEA-------QGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQA 243
++C++C A Q PNI ++ + RF E FG + ++ +
Sbjct: 224 YRCESCKKLVAARKQMSILQAPNILVIQLK----RF---EGIFGGKIDKAIAFEEVLVLS 276
Query: 244 LYFCKPFRDRVLEY 257
+ CK +D EY
Sbjct: 277 SFMCKGSQDPRPEY 290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 22/127 (17%)
Query: 222 NERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-------AKNKKNKETLLSCLAD 274
N GL N GN+CY NSVLQ L + P + L + N + K C+ +
Sbjct: 20 NRPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSVSNGERKRECPFCILE 79
Query: 275 LFHNIATHKKKVGSI-------APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K+ V S+ AP K + L+ + F Q+DAHEFL ++I+ +
Sbjct: 80 --------KRIVRSLSLDLTLDAPAKIQSCLKIFAEHFKGGQQEDAHEFLRYVIDACHNT 131
Query: 328 CMKVKKL 334
C+++ KL
Sbjct: 132 CLRLMKL 138
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P IL + LKRF+ + K+++ + +V + + +P YN
Sbjct: 237 KQMSILQAPNILVIQLKRFEGIFGGKIDKAIAFEEVLVLS-----SFMCKGSQDPRPEYN 291
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L ++H G P GHY + +K + W +D V ST++D SE
Sbjct: 292 LFGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYV---TLSTMQDVL---------SEK 339
Query: 444 GYILFY 449
YILF+
Sbjct: 340 VYILFF 345
>gi|170572009|ref|XP_001891950.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158603235|gb|EDP39240.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 731
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 19/133 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMY 383
K K+ P IL +HLKRF++ ++ VKV +V FP L+L F + + +Y
Sbjct: 355 KICKIIDPPEILCIHLKRFRH--DLSDSVKVRSKVTFPVHDLDLTPFIANFEKSKEPVLY 412
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+LVA + H G+ GHYI+ K+ D W FDD+VV +++ I D S
Sbjct: 413 DLVAFITHYGANAESGHYIAYCKNEVDDNWYEFDDNVVTRLE---IGDIL---------S 460
Query: 442 ETGYILFYQSRDS 454
+ Y+LFYQ + S
Sbjct: 461 KEAYVLFYQRQSS 473
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRD--RVLEYKAKNKK-----NKETLLSCLADLFHNI 279
GL N GNTCY N+ +QAL C PF D R L+ A N E +S
Sbjct: 37 GLTNLGNTCYMNAAIQALSNCPPFSDFFRSLDSIASFASKVLDNNAEPPISSSFRCLLQA 96
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+++ I P+ F+ ++R + +F QQDA EF+ L++
Sbjct: 97 LWSEERNRCINPQLFLAQIRNQYPQFRGPAQQDAQEFIRCLLD 139
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHT----QATTLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 172 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYNLVAVVIHCGS 394
+L L LKRF K++ V +P L++R + +S P +Y L AV++H G
Sbjct: 312 VLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-MSQPNGEP-IVYVLYAVLVHTGF 365
Query: 395 GPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
+ GHY +K S+ W +D +V D ++ S+ Y+LFY
Sbjct: 366 NCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVL------------SQQAYVLFY 409
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ NP +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|13938160|gb|AAH07196.1| USP22 protein, partial [Homo sapiens]
Length = 173
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 31/142 (21%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FH 371
K + +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 42 KQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQ 99
Query: 372 LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDF 430
D++N D Y+L AVV H G+ + GHY S ++ H D W DD ++ K ++I+D
Sbjct: 100 QPTDSLNNDNKYSLFAVVNHQGTLES-GHYTSFIRQHKDQWFKCDDAIITK---ASIKDV 155
Query: 431 FGLTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 156 L---------DSEGYLLFYHKQ 168
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 166 IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 4 VSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 40
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ NP +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|340931884|gb|EGS19417.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 516
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 31/190 (16%)
Query: 276 FHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFL--NFLINHINEKCMKVKK 333
N+A KKK G+ P + E++ Y++QD E+ N ++ +++
Sbjct: 342 LENLAQRKKK-GTAKPGPLTLQECLEEE----YIKQDKCEYRCNNCGSMQQAKRQTSIRR 396
Query: 334 LPMILALHLKRFKYMDKMN-RHVKVSHRVVFPLELRLFHLSDDAVNPDR----------M 382
LP +L++ LKRF+Y N R K+ V FPL+L + + A N D
Sbjct: 397 LPNVLSIQLKRFEYKQGRNERAAKIDTPVQFPLQLNMLPYTSRARNHDVSQNYELQRSCT 456
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
Y+L++VV+H G + GHY+S + D W +F+D V+ +S + +
Sbjct: 457 YDLLSVVVHVGE-IDTGHYVSYCRVGDQWFVFNDHKVELAQKSDVLN------------S 503
Query: 443 TGYILFYQSR 452
Y+LFY R
Sbjct: 504 KAYLLFYCVR 513
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 33/138 (23%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
+QDAHEF FL L ER + ++ G H+ + +H+ + G
Sbjct: 272 EQDAHEFFQFLAEE-----LHERNGDGKRPEM-------GSEHTCNCI-----IHQTYYG 314
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDI-------KQNT------SITQCLRGFSSTETL 185
L + T C NC+ V+S+ + F DL + + K+ T ++ +CL +
Sbjct: 315 KLQTTTTCQNCQGVTSQVQSFLDLSLPLENLAQRKKKGTAKPGPLTLQECLEEEYIKQDK 374
Query: 186 CSDNKFKCDNCASYQEAQ 203
C +++C+NC S Q+A+
Sbjct: 375 C---EYRCNNCGSMQQAK 389
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL-EYKAKNKKNKETLLSC-LADLFHNIATHKK 284
G+ N G TCY N +LQ R+ L + + + LSC + D+F + +
Sbjct: 184 GIYNAGATCYQNVILQCFLHNPILRNYYLSDGHPSSSCDVPHCLSCAMDDIFQSFYADES 243
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYM---QQDAHEFLNFLINHINEK 327
G A EK F+N + +QDAHEF FL ++E+
Sbjct: 244 TNGYTAANILSGFWISEKKAFENLVTTKEQDAHEFFQFLAEELHER 289
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 15/132 (11%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S F Q DAHE++ FL++ +N ++L P G + E T
Sbjct: 176 SRNFTPGRQADAHEYIRFLLDDMNRILLG------------IPRGKLCHDRQQ---EMHT 220
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
VHEIF G S+ C NC + S E F D+ +D++ +++ + L+GF++ E L N+
Sbjct: 221 LVHEIFGGCYESKVSCQNCGSSSDTVEPFLDVSLDLEGVSTLAKALKGFTTPERLFGPNR 280
Query: 191 FKCDNCASYQEA 202
+ C C +A
Sbjct: 281 YFCSQCKQRTDA 292
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 5/112 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE---YKAKNKKNKETLLSCLA--DLFHNIAT 281
GL N GNTC+ N+ LQ+L C PF +LE A N + S A N+ +
Sbjct: 96 GLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNCPSHSGYCSICAVEKTAQNVFS 155
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
S +P + L+ F Q DAHE++ FL++ +N + + +
Sbjct: 156 SDTSFQSYSPVDLVRNLKVLSRNFTPGRQADAHEYIRFLLDDMNRILLGIPR 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + +++P + HLKRF+ K N+ V F L +++ Y L
Sbjct: 294 KVFQFRRIPNVFIFHLKRFRLSKKENKFVSYDETFDFS---PFIPLKGNSIRKPVYYRLC 350
Query: 387 AVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIED 429
AV++H G + GHY + V+ S+ W L DD+ ++ Q + +
Sbjct: 351 AVIVHEGFSIHGGHYYAYVRNSNGIWYLKDDECTSRVVQQKVNN 394
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 35 EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHIN 94
E RI +S T +KIS C I ++ F Q+DAHEFL ++I+ +
Sbjct: 79 EKRIARSLSVDLTTDAPNKIS---SCLKIF------AEHFKLGRQEDAHEFLRYVIDACH 129
Query: 95 EVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSS 154
L +L G + F + V EIF G L S+ KCL+C S+
Sbjct: 130 NTSL----------RLKKLRYNGNEP-----FNGNSVVKEIFGGALQSQVKCLSCGAESN 174
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA-------QGPNI 207
K ++ D+ ++I Q++S+ + L+ F +E L +NK++C++C A Q PNI
Sbjct: 175 KADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNI 234
Query: 208 SALE 211
++
Sbjct: 235 LVIQ 238
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-------NKKNKETLLSCL 272
PP GL N GNTCY NSVLQ L F P + L +K + + K C+
Sbjct: 22 PP----LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCI 77
Query: 273 ADLFHNIA-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
+ IA + + + AP K + L+ + F Q+DAHEFL ++I+ + +++
Sbjct: 78 VE--KRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRL 135
Query: 332 KKL 334
KKL
Sbjct: 136 KKL 138
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P IL + LKRF + K+++ + +V L F +S + +P Y
Sbjct: 224 KQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILV----LSNF-MSKASKDPQPEYK 278
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L +++H G P GHY + VK S W +D F L++ + SE
Sbjct: 279 LFGIIVHSGFSPESGHYYAYVKDSLGRWYCCND------------SFVSLSTLQEVLSEK 326
Query: 444 GYILFYQSRDSTDA 457
YILF+ + A
Sbjct: 327 AYILFFSRSNQRPA 340
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 41 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHT----QATTLVCQIFGG 82
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 83 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 140
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 337 ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYNLVAVVIHCGS 394
+L L LKRF K++ V +P L++R + +S P +Y L AV++H G
Sbjct: 158 VLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-MSQPNGEPI-IYVLYAVLVHTGF 211
Query: 395 GPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
+ GHY +K S+ W +D +V D ++ S+ Y+LFY
Sbjct: 212 NCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVL------------SQQAYVLFY 255
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 256 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 315
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 316 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 371
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 770 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 825
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 826 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 872
Query: 449 YQSRD 453
YQ RD
Sbjct: 873 YQRRD 877
>gi|321478478|gb|EFX89435.1| hypothetical protein DAPPUDRAFT_310510 [Daphnia pulex]
Length = 936
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
Y GL N GNTCY N+VLQAL P ++ L+ K + N++ L L A +
Sbjct: 236 YTGLGNLGNTCYMNAVLQALANTTPLKNYFLDKKFQADINRDNPLGFGGSLAIAFAIILR 295
Query: 285 KV-----GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
++ SI P + L +F Y Q DA EF+ FL++ ++E +VK P+
Sbjct: 296 QLWSGQRDSIEPSHLKSLLANRASQFSGYAQHDAQEFMAFLLDGLHEDLNRVKTKPL 352
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 26/138 (18%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLFHLSDDAVNPDRMYNL 385
K M V +LP IL + LKRF + + M R K+ +V FP+E L L +Y+L
Sbjct: 791 KQMSVWRLPEILTIQLKRFSFRNLMWRD-KIDQKVHFPVEQLDLSPYLSSITEHGAVYDL 849
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-----------WLLFDDDVVDKIDQSTIEDFFGLT 434
AVV H G G GHY S + W DD V I + ++
Sbjct: 850 YAVVNHYG-GILYGHYTSFARCPAATSDKSQKDVVGWRCMDDRQVRDICEESV------- 901
Query: 435 SDHQKSSETGYILFYQSR 452
+ Y+L YQ R
Sbjct: 902 -----VTSAAYLLLYQRR 914
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 79 QQDAHEFLNFLINHINEVIL-SERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
Q+DAHEFL L++ + L + R +SNA +L+ E T+VH IF
Sbjct: 252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLA----------------ETTFVHRIFG 295
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFKCDNC 196
G L S+ +C C S+ ++F DL ++I + + L F++ ETL N+++C C
Sbjct: 296 GYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPAC 355
Query: 197 ASYQEAQ 203
+ AQ
Sbjct: 356 SQLVCAQ 362
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K + P + + LKRF + +R K+S V +P LRL S Y L
Sbjct: 362 QKRLSFHTAPNVCTVQLKRFMFG---SRSSKLSKNVAYPESLRL---SLSGPEGSARYRL 415
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
V++H G+ N GHY S+VK+ + W DD V ++ T+ HQ +
Sbjct: 416 AGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVL--------HQHA---- 463
Query: 445 YILFY 449
Y+LFY
Sbjct: 464 YLLFY 468
>gi|297819606|ref|XP_002877686.1| ubiquitin-specific protease 26 [Arabidopsis lyrata subsp. lyrata]
gi|297323524|gb|EFH53945.1| ubiquitin-specific protease 26 [Arabidopsis lyrata subsp. lyrata]
Length = 1047
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 125/323 (38%), Gaps = 85/323 (26%)
Query: 214 IGPD----RFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL 269
+GPD R + GL N G TCY+NS+LQ LY FR+ V + K + +L
Sbjct: 90 LGPDPTLDRRDSDSTPAGLTNLGATCYANSILQCLYMNTAFREGVFSVEVDVLK-QYPVL 148
Query: 270 SCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+A LF + H K + F+ L E DN +QQD HEF L+ + E+C+
Sbjct: 149 DQIARLFAQL--HASKKSFVDSDAFVKTL-----ELDNGVQQDTHEF-LTLLLSLLERCL 200
Query: 330 K---VKKLPMIL----ALHLKRFKYMDKMNRHVKVSHRV--VFPLELRLF---------- 370
+ V K I+ + + K R + S +V + LEL +
Sbjct: 201 RHSGVYKAKTIVQDLFSGSVSHVTTCSKCGRDSEASSKVEDFYALELNVKGLKTLDASLN 260
Query: 371 -HLSDDAVNPDRMY--------------------------------------------NL 385
+LS + +N D Y +L
Sbjct: 261 DYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKSSQNKLTYDL 320
Query: 386 VAVVIHCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AV+IH GS N GHY++ +K W FDD+ V ++ + F +S +S
Sbjct: 321 SAVLIHKGSAVNSGHYVAHIKDEKTGLWWEFDDEHVSELGK---RPFNEASSSTPQSESN 377
Query: 444 GYILFYQSRDSTDARTMNSNDCR 466
G S + TD S+DCR
Sbjct: 378 GTA---SSENITDVIQSGSSDCR 397
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 26/133 (19%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD HEFL L++ + + S ++ T V
Sbjct: 176 ELDNGVQQDTHEFLTLLLSLLERCL-----------------------RHSGVYKAKTIV 212
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
++F G ++ T C C SSK EDF+ L++++K ++ L + S E L DN
Sbjct: 213 QDLFSGSVSHVTTCSKCGRDSEASSKVEDFYALELNVKGLKTLDASLNDYLSLEQLNGDN 272
Query: 190 KFKCDNCASYQEA 202
++ C +C + +A
Sbjct: 273 QYFCGSCNARVDA 285
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 24/135 (17%)
Query: 327 KCMKVKKLPMILALHLKRFK-YMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVN-PD-- 380
K + + PM+L +HLKRF + +K+N+ + S R+ + R L D + PD
Sbjct: 332 KRFSIDQAPMVLTVHLKRFGIFGNKINKPISYSDRLHLGRYMSERDKGLGADVEDEPDLG 391
Query: 381 -----RMYNLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLT 434
+ Y L A+V H GSGPN GHY++ V+S D WL DD V K+ Q ++D
Sbjct: 392 TLGAAQQYRLFAIVHHYGSGPNVGHYVASVRSADGQWLRMDDSFVSKLPQCPLDD----- 446
Query: 435 SDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 447 -------PSAYLLFY 454
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 20/128 (15%)
Query: 218 RFP-PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL----------------EYKAK 260
RFP + R GL N GNTCY NSV+Q+L P +L + +A
Sbjct: 117 RFPRAHMRAAGLHNRGNTCYMNSVMQSLLHTPPLATALLTQSAPTLLGRYGVPRTQKQAV 176
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N L+ + D F A +++P F++ LRK Q+DAHE+L L
Sbjct: 177 KAANSFNALTEMKDFF---AHAYSGASAVSPTAFVSNLRKFARPLRPGRQEDAHEYLRLL 233
Query: 321 INHINEKC 328
+ + + C
Sbjct: 234 LEALQQAC 241
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 18/125 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE+L L+ + + G D + T + IF G
Sbjct: 223 QEDAHEYLRLLLEALQQACTCF---------------AGKDIKPNDPILSTTLIQRIFGG 267
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S C +C S + DL +D+++ ++ Q L F++ E L +K++CD+C
Sbjct: 268 RLRSRVTCYSCRHNSDTYDPMLDLSLDVRKGIHTVKQALDAFTAAEALA--DKYQCDHCQ 325
Query: 198 SYQEA 202
EA
Sbjct: 326 RRVEA 330
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 261 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 320
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 321 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 376
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ NP +Y+L+AV
Sbjct: 775 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSN 830
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 831 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 877
Query: 449 YQSRD 453
YQ RD
Sbjct: 878 YQRRD 882
>gi|224082308|ref|XP_002306642.1| predicted protein [Populus trichocarpa]
gi|222856091|gb|EEE93638.1| predicted protein [Populus trichocarpa]
Length = 1084
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 207 ISALEKEIGPDRF----PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK 262
+S + + +G D F +E GL N G TCY+NSVLQ LY FR+ V + +
Sbjct: 84 MSDILQALGSDPFNDLRSTDETPSGLTNLGATCYANSVLQCLYMNASFREGVFSVEP-DV 142
Query: 263 KNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEF 316
N++ +L L LF + H K+ I P FIT L E DN +QQD HEF
Sbjct: 143 LNEQPVLYQLVRLFAQL--HASKLAFIDPAPFITTL-----ELDNAVQQDGHEF 189
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 9/144 (6%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
++++ LP +L LKR++++ K K++ FP EL + + + +Y+L AV
Sbjct: 290 IRLRTLPDVLNFQLKRYEFLPKTTTRKKITSAFGFPGELDMGRRLSEPSQLEWIYDLSAV 349
Query: 389 VIHCGSGPNRGHYISIVKSHDF--WLLFDDDVVDKIDQSTIEDFF-----GLTSDHQKSS 441
+IH G+ N GHYI+ +K + W FDD+ V + + + F G+ SD S
Sbjct: 350 LIHKGTAVNSGHYIAHIKDENTGQWWEFDDEHVSNLGRRPFGEGFSSSAKGVHSDKVSPS 409
Query: 442 ETGYILFYQSR--DSTDARTMNSN 463
G L SR D+ +++ SN
Sbjct: 410 CAGATLADTSRSMDAVQPQSLESN 433
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD HEFL L++ E LS S A+ T V
Sbjct: 177 ELDNAVQQDGHEFLTLLLSL-LERCLSHSKVSKAR----------------------TIV 213
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
++F+G ++ T C NC SSK EDF++LQ+++K S+ + L + S E L +N
Sbjct: 214 QDLFRGSVSQVTTCSNCGRDSEASSKTEDFYELQMNVKGLKSLDESLDQYLSVEQLHGEN 273
Query: 190 KFKCDNCASYQEA 202
++ C+ C S +A
Sbjct: 274 QYNCELCKSRVDA 286
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 248 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 307
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 308 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 363
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 761 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 816
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 817 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 863
Query: 449 YQSRD 453
YQ RD
Sbjct: 864 YQRRD 868
>gi|390481017|ref|XP_003736056.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22-like [Callithrix jacchus]
Length = 697
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 564 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 621
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 622 YQQPTDSLNNDNKYSLFAVVNHQGTL-ESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 677
Query: 429 DFFGLTSDHQKSSETGYILFYQ 450
D GY+LFY
Sbjct: 678 DVL---------DSEGYLLFYH 690
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 416 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 465
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------- 169
+ + +IF G L S+ C C VS+ + F+D+ +D+ +
Sbjct: 466 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 519
Query: 170 ------------TSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
T++T CLR F+ E L S K KC C SYQE+
Sbjct: 520 NVVNGESHMAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 564
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 349 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 408
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 409 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 450
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + L+ K + + N++ L ++ A K++
Sbjct: 300 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQM 359
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 360 WSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 415
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP +L +HLKRF Y NR+ + V +R H+S+ +P +Y+L+AV
Sbjct: 818 LPKVLVVHLKRFSY----NRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPYVYDLIAVSN 873
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 874 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 920
Query: 449 YQSRD 453
YQ RD
Sbjct: 921 YQRRD 925
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L P + + A T++H++F G
Sbjct: 113 QEDAHEFLRYTVDAMQKSCL---PGTKLDRQTQAT----------------TFIHQVFGG 153
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + F D+ ++IK S+++ L F E L +N +KC C
Sbjct: 154 YLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKC 211
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L + PF + +L + +K E + + ++I
Sbjct: 30 GLQNMGNTCFLNSALQCLTYTAPFANYMLT-REHSKTCHEPGFCMMCTMQNHIIQVFANT 88
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
G+ I P + L++ F Q+DAHEFL + ++ + + C+ KL
Sbjct: 89 GNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKL 137
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKLPM------------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ +L L LKRF K++ V +P L+LR F +
Sbjct: 207 KCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGG----KITKDVKYPEYLDLRPF-M 261
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P ++Y L AV++H G + GHY +K S+ W +D V D ++
Sbjct: 262 SQSQGEP-QVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVL--- 317
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 318 ---------SQQAYVLFY 326
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + L+ K + + N++ L ++ A K++
Sbjct: 255 GLGNLGNTCFMNSALQCLSNTAPLTEYFLKDKYEAEINRDNPLGMKGEIAEAYAELIKQM 314
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 315 WSGRNTQVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 370
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP +L +HLKRF Y NR+ + V +R H+S+ +P +Y+L+AV
Sbjct: 773 LPKVLVVHLKRFSY----NRYWRDKLDTVVEFPIRDLHMSEFVCDPAAGPYVYDLIAVSN 828
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 829 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 875
Query: 449 YQSRD 453
YQ RD
Sbjct: 876 YQRRD 880
>gi|426340532|ref|XP_004034183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Gorilla gorilla gorilla]
Length = 633
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
>gi|348515173|ref|XP_003445114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 [Oreochromis
niloticus]
Length = 1002
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS +Q L P + L+ K ++ N++ L ++ A K++
Sbjct: 262 GLSNLGNTCFMNSAVQCLSNTPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQL 321
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S + P+ F T++ + +F Y QQD+HE L FL++ ++E +++K P I
Sbjct: 322 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYI 377
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MY 383
K + + LP +L +HLKRF Y M K+ V FP LR +S+ +NP+ Y
Sbjct: 795 KKLDLWSLPPVLVVHLKRFSYSRYMRD--KLDSLVDFP--LRDLDMSEFLINPNAGPCRY 850
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L+AV H G + D W FDD V S+ Q S+
Sbjct: 851 DLIAVSNHYGGMGGGHYTGYAKNKDDGKWYNFDDSSVSP------------ASEDQIVSK 898
Query: 443 TGYILFYQSRDST 455
Y+LFYQ +D+
Sbjct: 899 AAYVLFYQRQDTV 911
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI SI+Q L E L +N + C
Sbjct: 196 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAHSISQALEQLMKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQAHLTRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 318
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G + GHY VK+ + W DD V D + +
Sbjct: 319 VLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 366
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 367 PAYVLFYMQK 376
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 22/134 (16%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 564 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 620
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++
Sbjct: 621 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQN------------AEA 667
Query: 445 YILFYQSRDSTDAR 458
Y+LFY+ + S +AR
Sbjct: 668 YVLFYR-KSSEEAR 680
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEDPQT 269
Query: 338 LA 339
LA
Sbjct: 270 LA 271
>gi|444525392|gb|ELV13999.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Tupaia
chinensis]
Length = 479
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FH 371
K + +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 348 KQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQ 405
Query: 372 LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDF 430
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 406 QPTDSLNSDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDV 461
Query: 431 FGLTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 462 L---------DSEGYLLFYHKQ 474
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 198 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 247
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 248 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 301
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC ASYQE+
Sbjct: 302 SVVNGESHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGWASYQES 346
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 25/108 (23%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-NKKNKETLLSC-----LADLFHNIA 280
GL+N GNTC+ N ++QAL RD L + + ++ + L C +L H +
Sbjct: 144 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQELLHLVW 203
Query: 281 THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
TH + + Y QQDAHEFL ++ ++ C
Sbjct: 204 THARHLA-------------------GYEQQDAHEFLIAALDVLHRHC 232
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 248 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 307
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 308 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 363
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 761 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 816
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 817 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 863
Query: 449 YQSRD 453
YQ RD
Sbjct: 864 YQRRD 868
>gi|9279587|dbj|BAB01045.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 35 EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHIN 94
E RI +S T +KIS C I ++ F Q+DAHEFL ++I+ +
Sbjct: 79 EKRIARSLSVDLTTDAPNKIS---SCLKIF------AEHFKLGRQEDAHEFLRYVIDACH 129
Query: 95 EVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSS 154
L +L G + F + V EIF G L S+ KCL+C S+
Sbjct: 130 NTSL----------RLKKLRYNGNEP-----FNGNSVVKEIFGGALQSQVKCLSCGAESN 174
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA-------QGPNI 207
K ++ D+ ++I Q++S+ + L+ F +E L +NK++C++C A Q PNI
Sbjct: 175 KADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNI 234
Query: 208 SALE 211
++
Sbjct: 235 LVIQ 238
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-------NKKNKETLLSCL 272
PP GL N GNTCY NSVLQ L F P + L +K + + K C+
Sbjct: 22 PP----LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCI 77
Query: 273 ADLFHNIA-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
+ IA + + + AP K + L+ + F Q+DAHEFL ++I+ + +++
Sbjct: 78 VE--KRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRL 135
Query: 332 KKL 334
KKL
Sbjct: 136 KKL 138
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Y Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 156 TSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 198
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 199 -IHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENA 257
Query: 191 FKCDNC 196
+ C C
Sbjct: 258 YYCGRC 263
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY N+ LQ L P D +L + ++ + E C + +
Sbjct: 85 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 144
Query: 286 VGSIA-PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
G I P + +T F Y Q+DAHEFL F + ++E C++V +
Sbjct: 145 SGDIMKPSQILT------SAFHKYQQEDAHEFLMFTLETMHESCLQVHR 187
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L L LKRF +K++R +V +P L+L+ + LS P
Sbjct: 271 KTLHVHIAPKVLLLVLKRFSAFTGNKLDR------KVSYPEFLDLKPY-LSQPTAGP-LP 322
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 323 YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 370
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY ++ +++ + RV+
Sbjct: 371 ENAYVLFYVQQNDLKQVSIDMPEGRVH 397
>gi|149235975|ref|XP_001523865.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452241|gb|EDK46497.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 942
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 82/158 (51%), Gaps = 22/158 (13%)
Query: 306 DNYMQQDAHEFLNFLINHINEKCMK----VKKLPMILALHLKRFKYM-------DKMNRH 354
D ++ + E ++++ N+ +E +K V KLP +L +HLKRF Y+ +K+ +
Sbjct: 792 DAFLHLNEVESISYMSNNNSELQVKKQTFVSKLPEVLIIHLKRFSYLKDQEVAIEKLKKL 851
Query: 355 VKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDF--WL 412
V +H++ P ++ LS +A Y L +VV H G+ + GHY S + ++ W
Sbjct: 852 VAYNHKLSVPSQI----LSAEAQASVSTYQLSSVVYHHGANADTGHYTSDIYDYELKQWW 907
Query: 413 LFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQ 450
DD +V+ I + + L S + ++S+ YIL Y+
Sbjct: 908 RIDDTIVNSIKANEV-----LNSGNDENSKNAYILVYE 940
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRD--RVLEYKAKNK--KNKETLLSCLADLFHNI-AT 281
GL N GN C+ NS+LQ L +C+PF +++E K+ ++ + LL LF++
Sbjct: 560 GLTNTGNICFMNSILQILLYCQPFNRLLKLIETKSISELVNSSLPLLDATIKLFNDFKPV 619
Query: 282 HKKKV-GSI------APKKFITRLRKEKDEFDNY---MQQDAHEFLNFLINHINEKCM 329
H GSI P + + +F + Q+DA EFL + ++ +NE+ +
Sbjct: 620 HSDSSNGSINNGKAAVPIEPFYHALSKHSKFSHLRWGQQEDAEEFLGYYLDALNEEFL 677
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Y Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 157 TSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 199
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 200 -IHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENA 258
Query: 191 FKCDNC 196
+ C C
Sbjct: 259 YYCGRC 264
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY N+ LQ L P D +L + ++ + E C + +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 145
Query: 286 VGSIA-PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
G I P + +T F Y Q+DAHEFL F + ++E C++V +
Sbjct: 146 SGDIMKPSQILT------SAFHKYQQEDAHEFLMFTLETMHESCLQVHR 188
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L L LKRF +K++R +V +P L+L+ + LS P
Sbjct: 272 KTLHVHIAPKVLLLVLKRFSAFTGNKLDR------KVSYPEFLDLKPY-LSQPTAGP-LP 323
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 324 YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 371
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY ++ +++ + RV+
Sbjct: 372 ENAYVLFYVQQNDLKQVSIDMPEGRVH 398
>gi|365760061|gb|EHN01808.1| Ubp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1104
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS------ 270
++ P GLVN GNTCY NS LQ L RD L +++ N+E L
Sbjct: 204 NKLEPGSGTTGLVNLGNTCYMNSALQCLVHIPELRDYFLYNGYESEINEENPLGYHGYVA 263
Query: 271 -----CLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ LFHN + ++ + P F + + F YMQQD+ EFL FL++ ++
Sbjct: 264 RAFSDLVQKLFHNKLSSMQRNAAFPPSMFKSTVGHFNSMFSGYMQQDSQEFLAFLLDSLH 323
Query: 326 EKCMKVKKLPMI 337
E ++ K I
Sbjct: 324 EDLNRIIKKAYI 335
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW-- 131
F YMQQD+ EFL FL++ ++E + ++ + +PD D + + TW
Sbjct: 303 FSGYMQQDSQEFLAFLLDSLHEDLNRIIKKAYIEKPSLSPDDDVNDWNVVKKLADDTWEM 362
Query: 132 --------VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGF 179
+ ++F G+ S C C+ VS + + D+ + + +T ++ ++ F
Sbjct: 363 HLKRNCSVITDLFVGLYKSTLYCPECKNVSITFDPYNDVTLPLPVDTVWSKTVKIF 418
>gi|223996649|ref|XP_002287998.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977114|gb|EED95441.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 748
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 11/114 (9%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS------DDAVNPDRM 382
+K LP +L LHLKRFKY + K++ R FPL+L L +S ++ N D +
Sbjct: 565 LKRDGLPSVLQLHLKRFKYDWETGETSKINDRCSFPLKLDLSEISEPGKANENEANNDVV 624
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS---HDFWLLFDDDVVDKID-QSTIEDFFG 432
Y+L ++VIH G GHY S V+ + W FDD +V K++ + D +G
Sbjct: 625 YDLQSIVIHRGE-YGSGHYYSYVRPDIRSNEWYRFDDQIVTKVEFNDVVADAYG 677
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 217 DRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
D F +Y GLVN GNTCY NS LQ Y R VL+ +
Sbjct: 236 DSFTQQRQYAGLVNLGNTCYLNSQLQCAYHVPYLRKLVLDAR 277
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + I+ + + LS P+ + +++ + T VH+IF G
Sbjct: 206 QEDAHEFLRYTIDAMQKACLSGYPKLDRQTQAT------------------TLVHQIFGG 247
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KC C++VS + + D+ V+I+Q +I + L F + L +N + C C
Sbjct: 248 YLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFVKPDVLSGENAYMCAKC 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLF--------HN 278
GL N GNTC+ NS +Q L + P + +L +KE +C F H
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLL--------SKEHSRTCHQSGFCMICVMQNHI 174
Query: 279 IATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I +I P FI L+K F Q+DAHEFL + I+ + + C+
Sbjct: 175 IQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACL 225
>gi|414865456|tpg|DAA44013.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 541
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR--MYN 384
+C+K++ LP ++ LKR+ ++ K K+S FP +L + NP Y
Sbjct: 288 RCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSSFSFPGQL---DMGKRLSNPTSSYTYE 344
Query: 385 LVAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTSD 436
L A++IH G+ N GHY++ +K S+ W FDD+ V K+ + G TS+
Sbjct: 345 LAAILIHKGTAANSGHYVAHIKDESNGQWWEFDDETVSKLGLHPFGENLGKTSN 398
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
GPN S+ D +E GL N G TCY+NS+LQ LY FR + K
Sbjct: 92 GPNPSS-------DLRDSSETPAGLTNLGATCYANSILQCLYMNTSFRSGIFSLDLDVLK 144
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
K +L L LF + + K+ I FI L E DN +QQD+HEFL ++
Sbjct: 145 -KHPVLDQLVRLFAQLQS--SKMAFIDSTPFIKAL-----ELDNGVQQDSHEFLTLFLSL 196
Query: 324 INEKCMKVKKLP 335
+ E+ + K+P
Sbjct: 197 L-EQSLSHSKVP 207
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 26/133 (19%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD+HEFL + LS QS + SK+ G E V
Sbjct: 177 ELDNGVQQDSHEFLT--------LFLSLLEQSLSHSKVP-------------GTRE--IV 213
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+F+G ++ T+C +C SSK EDF++L+++IK ++ + L + S E L +N
Sbjct: 214 QHLFRGSVSHVTRCSSCGKDSAASSKSEDFYELELNIKGFNNLEESLDDYFSEEGLVGEN 273
Query: 190 KFKCDNCASYQEA 202
++ C++C +A
Sbjct: 274 QYFCESCQKRVDA 286
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 229 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 288
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 289 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 344
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ NP +Y+L+AV
Sbjct: 743 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNPSARPYVYDLIAVSN 798
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 799 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 845
Query: 449 YQSRD 453
YQ RD
Sbjct: 846 YQRRD 850
>gi|167387647|ref|XP_001738248.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Entamoeba dispar
SAW760]
gi|165898621|gb|EDR25439.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Entamoeba
dispar SAW760]
Length = 585
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 68/146 (46%), Gaps = 29/146 (19%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
KC K+LP +L + LKRF + +K K++ +V FPL+L + D +Y+L
Sbjct: 244 KCYFFKRLPWVLPIQLKRFTWDEK-----KINGKVTFPLQLNISKYGVDG-----LYDLY 293
Query: 387 AVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A+V+H G GHYIS K+ W FDD+ V + + E Y
Sbjct: 294 AIVVHLGKTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKVV------------LQEEAY 341
Query: 446 ILFY---QSRDSTD---ARTMNSNDC 465
+LFY + R ST R + SND
Sbjct: 342 MLFYSKSEERVSTTKEIKRAIESNDL 367
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 28/142 (19%)
Query: 62 LILELDLCS-SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN 120
+I E +L S Y Q+DA EF LI+H++E I+ + K+K+SA
Sbjct: 128 IIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAIIGK-----GKNKISA-------- 174
Query: 121 HSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFS 180
+ IF L S C NC + DE F L ++I + ++ F
Sbjct: 175 -----------ISSIFHVELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFF 223
Query: 181 STETLCSDNKFKCDNCASYQEA 202
E + + C+ C + A
Sbjct: 224 KKEMISH---YHCEKCNTKSNA 242
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
G N + CY S+LQ L PF + +++ K K + L + A K
Sbjct: 67 GYFNAHSNCYMISILQVLTHTTPFYNYMIQQKIKVD---DIFFKELERIIKE-AFEKNNN 122
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ P F L+K Y Q+DA EF LI+H++E +
Sbjct: 123 QPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAII 165
>gi|7328168|emb|CAB82415.1| hypothetical protein [Homo sapiens]
Length = 264
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FH 371
K + +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 133 KQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQ 190
Query: 372 LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDF 430
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 191 QPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDV 246
Query: 431 FGLTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 247 L---------DSEGYLLFYHKQ 259
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 25/96 (26%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD-------------------------I 166
+ +IF G L S+ C C VS+ + F+D+ +D +
Sbjct: 36 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEGNVVNGESHV 95
Query: 167 KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
T++T CLR F+ E L S K KC C SYQE+
Sbjct: 96 SGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 131
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 22/134 (16%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 572 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 628
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++
Sbjct: 629 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQN------------AEA 675
Query: 445 YILFYQSRDSTDAR 458
Y+LFY+ + S +AR
Sbjct: 676 YVLFYR-KSSEEAR 688
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEDPQT 269
Query: 338 LA 339
LA
Sbjct: 270 LA 271
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER--------PQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H++ + + R PQ + L+A DG N ++S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHRELQNSRNGASHTASPQDGVR--LTAADGKCCINGTASV 310
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTS 171
V IF GIL +E CL C T S K + F DL +DI +
Sbjct: 311 ------VTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCT 364
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
++ CLR F+ E L + C C Q++
Sbjct: 365 LSDCLRSFTDLEELDDTELYFCHKCKKRQKS 395
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 210 LEKEIGPDRFPPNERY-----FGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN 264
L++ + PD ER+ GL N GNTC+ N++LQ+L + F E A + ++
Sbjct: 138 LQESLAPDSKLVKERWDCSRCTGLRNLGNTCFMNAILQSLSNIEQFSCYFKELPAVSLRS 197
Query: 265 KETLLSCLADLFHNIATHKKKVG------------------SIAPKKFITRLRKEKDEFD 306
+T ++H + + V + +P + K F
Sbjct: 198 GKTAGR---RMYHTRSQGESSVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFR 254
Query: 307 NYMQQDAHEFLNFLINHINEK 327
Y QQDAHEF+ +L++H++ +
Sbjct: 255 GYQQQDAHEFMRYLLDHLHRE 275
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDR-MYNLV 386
V+KLP +L LHLKRF + + K+ V FP L++R + L + P+ +Y+LV
Sbjct: 401 VQKLPKVLCLHLKRFHWTAFLRN--KIDTYVEFPLKGLDMRGYLLEPENSLPESCVYDLV 458
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AV + P+ ++ D W F+D V LTS+ YI
Sbjct: 459 AV-----ASPSMD--LAYGSHEDRWYHFNDSTVT------------LTSEDAVRKAKAYI 499
Query: 447 LFYQSR 452
LFY R
Sbjct: 500 LFYVER 505
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 770 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 826
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 827 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 883
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 351 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 406
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 407 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 451
>gi|340959623|gb|EGS20804.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 2887
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY NS LQ L + L ++AK + N + LS D+ + ++
Sbjct: 1763 GLQNLGNTCYMNSALQCLRSVEELTKYFLTHEAKKEINPDNPLSHNGDVAMAYSRLLDEI 1822
Query: 287 ------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S+AP+ F + + + F Y QQD EFL FL++ + E ++KK P I
Sbjct: 1823 YKDPTPASVAPRHFKSIIGRYAPAFSGYGQQDTQEFLGFLLDGLQEDLNRIKKKPYI 1879
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 499 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 555
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 556 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 612
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 168 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 223
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 224 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 282
Query: 338 LA 339
L
Sbjct: 283 LT 284
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 705 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 761
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 762 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 818
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 287 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 342
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 343 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQA 401
Query: 338 LA 339
+
Sbjct: 402 IT 403
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPERP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F+G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 QLFEGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 RKC 258
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQAHLTRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 318
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G + GHY VK+ + W DD V D + +
Sbjct: 319 VLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 366
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 367 PAYVLFYMQK 376
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T+V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TFVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK ++ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQTVNKALEQFVKPEQLDGENAYKCSKC 294
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQALSNPG 171
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 172 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKLPM------------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVTASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEP-IIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>gi|47211964|emb|CAF96183.1| unnamed protein product [Tetraodon nigroviridis]
Length = 609
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS +Q L P + L+ K ++ N++ L ++ A K++
Sbjct: 221 GLSNLGNTCFMNSAVQCLSNIPPLTEYFLKDKYTDELNEDNPLGMKGEIARAYAELIKQI 280
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S + P+ F T++ + +F Y QQD+HE L FL++ ++E +++K P I
Sbjct: 281 WSGKYSYVTPRPFKTQVGRFAPQFSGYQQQDSHELLAFLLDGLHEDLNRIRKKPYI 336
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 618 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 674
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 675 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 731
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 210 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 265
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 266 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 324
Query: 338 LA 339
L
Sbjct: 325 LT 326
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 616 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 672
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 673 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 729
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 208 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 263
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 264 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 322
Query: 338 LA 339
L
Sbjct: 323 LT 324
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 39/162 (24%)
Query: 302 KDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL------------PMILALHLKRFKYMD 349
KD DN+++ D L KC K KKL P++L +HLKRF
Sbjct: 300 KDALDNFVRIDK------LSGQNKYKCEKCKKLVNAEKYFAIEDAPLVLTVHLKRFSPTG 353
Query: 350 KMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH 408
+ K++ ++ +P L L ++S+ V+P Y L +++H G GP+ GHY S V+S
Sbjct: 354 R-----KITGQLRYPETLHLGPYMSNPKVDPS--YRLYGIILHSGGGPHSGHYTSYVRSS 406
Query: 409 DF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFY 449
W +DD V + + D Y+LFY
Sbjct: 407 SGKWHDMNDDYVSSLSHPPLSD------------RDAYVLFY 436
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 22/121 (18%)
Query: 79 QQDAHEFLNFLINHINEVIL-SERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQ 137
Q+D+HEFL F I+ + L + P+ K +E T+VH+IF
Sbjct: 222 QEDSHEFLRFSIDAMQAAALYGKSPKLEQK------------------IKETTFVHQIFG 263
Query: 138 GILTSETKCLNCETVSSKDEDFFDLQVDI--KQNTSITQCLRGFSSTETLCSDNKFKCDN 195
G L S CL C S + DL +D+ + NT + L F + L NK+KC+
Sbjct: 264 GRLRSRVHCLACGHNSDTFDSILDLSLDLGNRANT-LKDALDNFVRIDKLSGQNKYKCEK 322
Query: 196 C 196
C
Sbjct: 323 C 323
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA-------KNKKNKETLLSCLADLFHNI 279
GL N GNTC+ NS LQ L P R LE K K+ K+ + C +
Sbjct: 134 GLNNLGNTCFLNSALQVLLHTPPLL-RYLESSQHPSENNCKCKQQKDFCMICTMRACARV 192
Query: 280 A-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ T +++ S +P + L+K Q+D+HEFL F I+ + +
Sbjct: 193 SFTGRQR--SYSPNPVVRNLKKIAKHMRLGRQEDSHEFLRFSIDAMQAAAL 241
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 23/141 (16%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
K++KLP IL +HLKRF++ ++ K+S V FPLE L+ F LS D+ Y+L+
Sbjct: 573 KMQKLPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LSKDSSAQTTNYDLL 629
Query: 387 AVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+ H G+ + GHYI+ + S++ W FDD V ++ +S +++
Sbjct: 630 SVICHHGTA-SSGHYIAYCRNDSNNLWYEFDDQSVTEVSESCVQN------------AEA 676
Query: 445 YILFYQSR--DSTDARTMNSN 463
Y+LFY+ D+ R SN
Sbjct: 677 YVLFYKKSNGDTVKERGRVSN 697
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLL-----SCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P LE K +K+ L ++DL+
Sbjct: 157 GLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKPALCKSYQKLVSDLW----- 211
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
HK + + P ++ F Y QQD+ EFL L++ ++E+
Sbjct: 212 HKNRPSYVVPTTLFQGIKAINPMFRGYSQQDSQEFLRCLMDQLHEE 257
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|326929002|ref|XP_003210661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Meleagris gallopavo]
Length = 758
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 625 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 682
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 683 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 738
Query: 429 DFFGLTSDHQKSSETGYILFYQ 450
D GY+LFY
Sbjct: 739 DVL---------DSEGYLLFYH 751
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 477 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 526
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 527 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDG 580
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 581 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 625
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L +K + + L+ ++ LF + +
Sbjct: 410 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHR 469
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P + + + Y QQDAHEFL ++ ++ C
Sbjct: 470 S--PHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 511
>gi|66818975|ref|XP_643147.1| hypothetical protein DDB_G0276443 [Dictyostelium discoideum AX4]
gi|60471212|gb|EAL69175.1| hypothetical protein DDB_G0276443 [Dictyostelium discoideum AX4]
Length = 1306
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 11/148 (7%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMYN 384
K +K LP +L LHLKRF+Y + +VK++ + FP L L D+ + +Y
Sbjct: 478 KGVKFLSLPPVLNLHLKRFEYDPIRDENVKINDKYKFPDTLDLNRYLDEGADKSLSYIYT 537
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDK--IDQSTIEDF---FGLTSDHQK 439
L +V+IH G N GHY + +KS+ W FDDD V K D+ + E F FG+
Sbjct: 538 LQSVLIHSGDLHN-GHYYAFIKSNGEWFKFDDDEVTKSTFDRVSDESFGSDFGIRPGR-- 594
Query: 440 SSETGYILFYQSRDSTDARTMNSNDCRV 467
S+ Y+L Y + D T ++ +
Sbjct: 595 -SDNAYMLVYFRNNCYDQLTRTIDETEI 621
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKK 284
Y GL N G TCY NS+LQAL+ PFR V E + +++ L +F + K
Sbjct: 300 YVGLQNQGATCYMNSLLQALFHISPFRRAVYELPTISDDPTKSISLALQRIFFKLQFGDK 359
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVK 332
VG+ K D D + Q D E L +++N+K K
Sbjct: 360 AVGTKELTKSFGW-----DTMDIFTQHDVQELNRVLCDNLNDKMKGTK 402
>gi|414885081|tpg|DAA61095.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 920
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRMYNL 385
+C+K++ LP ++ LKR+ ++ K K+S FP +L L LS+ + + Y L
Sbjct: 288 RCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFPGQLDLGKRLSEPSSS--CTYAL 345
Query: 386 VAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTS--DHQKSS 441
A++IH G+G N GHY++ +K S+ W FDD+ V K+ + G S D QKS
Sbjct: 346 SAILIHKGTGANSGHYVAHIKDESNGQWWEFDDETVSKLGLHPFGEKPGKASNKDDQKSQ 405
Query: 442 ET 443
T
Sbjct: 406 NT 407
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N G TCY+NS+LQ LY FR + + + K +L LA LF + H K+
Sbjct: 108 GLTNLGATCYANSILQCLYMNIAFRSGIFSLEL-DVLEKHPVLDQLARLFAQL--HSSKM 164
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
I FI L E DN +QQD+HEFL ++ + E+ + K+P
Sbjct: 165 LFIDSAPFIKTL-----ELDNGVQQDSHEFLTLFLSLL-EQSLSHSKVP 207
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 26/127 (20%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD+HEFL ++ + QS + SK+ T V
Sbjct: 177 ELDNGVQQDSHEFLTLFLSLLE--------QSLSHSKVPGAR---------------TIV 213
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+F G ++ T+C +C SSK EDF++L+++IK ++ + L + S E L +N
Sbjct: 214 QNLFCGSVSHVTRCSSCGKESAASSKMEDFYELELNIKGLNNLEESLNEYFSEEALDGEN 273
Query: 190 KFKCDNC 196
++ C++C
Sbjct: 274 QYFCESC 280
>gi|393911690|gb|EFO26812.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 855
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 20/136 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMY 383
K K+ P IL +HLKRF++ +++ VK+ ++V FP L+L F S + +Y
Sbjct: 480 KICKIIDPPEILCIHLKRFRH--ELSYSVKIRNKVTFPVHDLDLTPFIASFEKNKEPVLY 537
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+LVA + H G+ GHY++ K+ D W FDD +V +++ I D S
Sbjct: 538 DLVAFITHYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLE---IADIL---------S 585
Query: 442 ETGYILFYQSRDSTDA 457
+ Y+LFYQ R ST +
Sbjct: 586 KEAYVLFYQ-RQSTQS 600
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFR------DRVLEYKAKN-KKNKETLLSCLADLFHNI 279
GL N GNTCY N+ +QAL C PF D V + +K N E +S
Sbjct: 130 GLTNLGNTCYMNAAIQALSNCPPFSDFFRSVDSVASFASKILDNNGEPPVSRSFRCLLRS 189
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+++ I P+ F+ ++R + +F QQDA EF+ L++
Sbjct: 190 LWSEERSRCINPQLFLAQVRHQYPQFRGLAQQDAQEFIRCLLD 232
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ + +E T + ++F G
Sbjct: 524 QEDAHEFLRHLVMSMQGACL---------------DGLGGEKQVEASLQETTLIQQMFGG 568
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L +N +KC C+
Sbjct: 569 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCS 628
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 629 AYVKAR 634
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDR-VLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY+N+VLQ L KP +L +K+ +K L C +L +T ++
Sbjct: 442 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMC--ELEQYASTLRES 499
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 500 GGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 543
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 635 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLY 690
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 691 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAV------------SLNQVMSEG 738
Query: 444 GYILFY 449
Y+LFY
Sbjct: 739 AYMLFY 744
>gi|414865457|tpg|DAA44014.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 1073
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 7/114 (6%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR--MYN 384
+C+K++ LP ++ LKR+ ++ K K+S FP +L + NP Y
Sbjct: 288 RCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSSFSFPGQL---DMGKRLSNPTSSYTYE 344
Query: 385 LVAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTSD 436
L A++IH G+ N GHY++ +K S+ W FDD+ V K+ + G TS+
Sbjct: 345 LAAILIHKGTAANSGHYVAHIKDESNGQWWEFDDETVSKLGLHPFGENLGKTSN 398
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
GPN S+ D +E GL N G TCY+NS+LQ LY FR + K
Sbjct: 92 GPNPSS-------DLRDSSETPAGLTNLGATCYANSILQCLYMNTSFRSGIFSLDLDVLK 144
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
K +L L LF + + K+ I FI L E DN +QQD+HEFL ++
Sbjct: 145 -KHPVLDQLVRLFAQLQS--SKMAFIDSTPFIKAL-----ELDNGVQQDSHEFLTLFLSL 196
Query: 324 INEKCMKVKKLP 335
+ E+ + K+P
Sbjct: 197 L-EQSLSHSKVP 207
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 26/127 (20%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD+HEFL ++ + QS + SK+ G E V
Sbjct: 177 ELDNGVQQDSHEFLTLFLSLLE--------QSLSHSKVP-------------GTRE--IV 213
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+F+G ++ T+C +C SSK EDF++L+++IK ++ + L + S E L +N
Sbjct: 214 QHLFRGSVSHVTRCSSCGKDSAASSKSEDFYELELNIKGFNNLEESLDDYFSEEGLVGEN 273
Query: 190 KFKCDNC 196
++ C++C
Sbjct: 274 QYFCESC 280
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 19/123 (15%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF--HLSDDAVNPDRMYNLV 386
M +KKLP +L LH+KRF+ + K+ + FP+ L++D+ P +Y+L
Sbjct: 435 MFIKKLPDVLCLHIKRFR-----DNGGKIDTLIEFPMAGLSVDDFLTEDSDEPPCVYDLQ 489
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
++++H G G + GHYI+ + W FDD VV +D S + S + Y+
Sbjct: 490 SIIVHIGYGCSSGHYIAFGRRGQKWYQFDDTVVKPVDTSLV------------SKQKAYV 537
Query: 447 LFY 449
L Y
Sbjct: 538 LMY 540
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLS----C-LADLFHN 278
R GL N GNTC+ N+VLQAL FR+ ++ + ++ LS C L D +
Sbjct: 228 RPRGLRNIGNTCFMNAVLQALASIYDFREYIMSLPSLEDYVEDEKLSKNGNCFLTDEYRK 287
Query: 279 I---ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
+ + K AP +F F + Q D+HEFL +L++ +N + K + LP
Sbjct: 288 LLISMSAKNYRDPTAPNEFREAFVSACPRFRGFRQHDSHEFLRYLLDQLNTEMRKCRHLP 347
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 22/131 (16%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q D+HEFL +L++ +N + R + PD ++ T +
Sbjct: 317 FRGFRQHDSHEFLRYLLDQLNTEMRKCRHLPDM------PD------------DKVTPIS 358
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDI----KQNTSITQCLRGFSSTETLCSDN 189
+ F+GIL S C C S+K ++F DL +D+ K ++ CL F E L
Sbjct: 359 KHFEGILQSSVICQTCRNCSNKMDEFMDLSLDVPRLSKARIRLSDCLDLFFQKELLEKGE 418
Query: 190 KFKCDNCASYQ 200
K +C C S Q
Sbjct: 419 KPECSKCKSKQ 429
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 563 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 619
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 620 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 676
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 154 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 209
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 210 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEIEEEPQA 268
Query: 338 LA 339
L
Sbjct: 269 LT 270
>gi|395748703|ref|XP_002827183.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pongo abelii]
Length = 746
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 613 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 670
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 671 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 726
Query: 429 DFFGLTSDHQKSSETGYILFYQ 450
D GY+LFY
Sbjct: 727 DVL---------DSEGYLLFYH 739
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 465 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 514
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 515 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 568
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 569 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 613
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 398 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 457
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 458 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 499
>gi|348525308|ref|XP_003450164.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like
[Oreochromis niloticus]
Length = 510
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + + S
Sbjct: 381 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQS 438
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D +N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 439 VDVLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 493
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 494 --------DSEGYLLFYHKQ 505
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 38/165 (23%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL ++ ++ + N K K + P NH
Sbjct: 226 LLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDTINDNGK-KANNP------NHC 278
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI---------------- 166
+ ++ IF G L S+ C C VS+ + F+D+ +D+
Sbjct: 279 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGGDG 332
Query: 167 ---------KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+T++T CLR F+ E L S K KC C SYQE+
Sbjct: 333 STVNGESHLSGSTTLTDCLRRFTRPEHLGSSAKIKCGGCHSYQES 377
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL+N GNTC+ N ++QAL RD L + K + + L C ++ LF + +
Sbjct: 160 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSNSCLVCEMSQLFQEFYSGHR- 218
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P + + + Y QQDAHEFL ++ ++ C
Sbjct: 219 -SPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 260
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL ++R + L + P +Y+LV
Sbjct: 402 IQKLPKVLCLHLKRFHWTAFLRN--KVDTYVEFPLKGLDMRGYLLEPEKSLPGSCLYDLV 459
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V ++ T+ YI
Sbjct: 460 AVVVHHGSGVGSGHYTAYGSHEGRWYHFNDSTVTLTNEDTVR------------KAKAYI 507
Query: 447 LFYQSR 452
LFY R
Sbjct: 508 LFYVER 513
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 69/151 (45%), Gaps = 30/151 (19%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER--------PQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H++ + R PQ + LS+ DG N ++S
Sbjct: 254 FRGYQQQDAHEFMRYLLDHLHRELQYSRNGASHPLSPQDGVR--LSSTDGKCCTNGTAS- 310
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI------KQN--------TS 171
V IF GIL +E CL C T S K + F DL +DI K+N +
Sbjct: 311 -----VVTSIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRNKDQEPVPTCT 365
Query: 172 ITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ CL F+ E L + C C Q++
Sbjct: 366 LRDCLHSFTDLEELDDTELYYCHKCKKRQKS 396
>gi|395330004|gb|EJF62389.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 691
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL + ++ + L+ P P E TWV++IF G
Sbjct: 210 QEDSHEFLRYFVDALQRSALAGAP----------PRAEHRHRKVDPKLAEKTWVYKIFGG 259
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
+L S CL+C S + DL VDI S+ LR F + + L +K+KC+ C
Sbjct: 260 LLRSRVSCLSCGYNSDTFDRMLDLSVDIAGVASLRDALRKFVAVDHLRGADKYKCEKC 317
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 28/134 (20%)
Query: 326 EKCMK---------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDA 376
EKC K + + P +L +HLKRF M R + + R L L F +S+ +
Sbjct: 315 EKCKKPVNADKQFTIHEAPAVLTVHLKRF---SPMGRKIAIPIRYDERLSLEPF-MSEGS 370
Query: 377 VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
P+ Y L V+ H G+GPN GHY + VK ++ W +DD V + S
Sbjct: 371 FGPN--YTLYGVISHAGNGPNSGHYYAHVKGANGRWHEMNDDYVAPL------------S 416
Query: 436 DHQKSSETGYILFY 449
S + YILFY
Sbjct: 417 GVPTSLKNAYILFY 430
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK----AKNKKNKETLLSCLADLFHNIATH 282
GL N GNTC+ NS LQ L P + ++ + N ++ L + ++ T
Sbjct: 126 GLGNTGNTCFLNSALQCLLHTPPLLHILSKHPESCHSPKSNNASCMICVLRQVMQDVFT- 184
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
K S P IT+L Q+D+HEFL + ++ + +
Sbjct: 185 --KPHSTIPYPVITKLHVIAKHMRRGRQEDSHEFLRYFVDALQRSAL 229
>gi|414885082|tpg|DAA61096.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
gi|414885083|tpg|DAA61097.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 1075
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRMYNL 385
+C+K++ LP ++ LKR+ ++ K K+S FP +L L LS+ + + Y L
Sbjct: 288 RCIKLRSLPPVVNFQLKRYVFLPKTTTKKKISSTFSFPGQLDLGKRLSEPSSS--CTYAL 345
Query: 386 VAVVIHCGSGPNRGHYISIVK--SHDFWLLFDDDVVDKIDQSTIEDFFGLTS--DHQKSS 441
A++IH G+G N GHY++ +K S+ W FDD+ V K+ + G S D QKS
Sbjct: 346 SAILIHKGTGANSGHYVAHIKDESNGQWWEFDDETVSKLGLHPFGEKPGKASNKDDQKSQ 405
Query: 442 ET 443
T
Sbjct: 406 NT 407
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N G TCY+NS+LQ LY FR + + + K +L LA LF + H K+
Sbjct: 108 GLTNLGATCYANSILQCLYMNIAFRSGIFSLEL-DVLEKHPVLDQLARLFAQL--HSSKM 164
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
I FI L E DN +QQD+HEFL ++ + E+ + K+P
Sbjct: 165 LFIDSAPFIKTL-----ELDNGVQQDSHEFLTLFLSLL-EQSLSHSKVP 207
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 26/127 (20%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
E DN +QQD+HEFL ++ + QS + SK+ T V
Sbjct: 177 ELDNGVQQDSHEFLTLFLSLLE--------QSLSHSKVPGAR---------------TIV 213
Query: 133 HEIFQGILTSETKCLNC---ETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDN 189
+F G ++ T+C +C SSK EDF++L+++IK ++ + L + S E L +N
Sbjct: 214 QNLFCGSVSHVTRCSSCGKESAASSKMEDFYELELNIKGLNNLEESLNEYFSEEALDGEN 273
Query: 190 KFKCDNC 196
++ C++C
Sbjct: 274 QYFCESC 280
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 604 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 660
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 661 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 717
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNK-----ETLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K ++ L + +L+
Sbjct: 186 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELW----- 240
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
HK + GS+ P ++ F Y QQD EFL ++ ++E
Sbjct: 241 HKSRPGSVVPTNLFQGIKTVNPTFRGYSQQDGQEFLRCFMDDLHE 285
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 154 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 209
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 210 -KSRPGSVVPTNLFQGIKTVNPMFRGYCQQDAQEFLRCLMDLLHEELKEQVMEVEENPQT 268
Query: 338 LA 339
+
Sbjct: 269 IT 270
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 573 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 629
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 630 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 686
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 211 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 267
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 663 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 719
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 720 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 776
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 292 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 347
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 348 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 404
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 697 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 753
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 754 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 810
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 287 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 342
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 343 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQA 401
Query: 338 LA 339
+
Sbjct: 402 IT 403
>gi|296419785|ref|XP_002839472.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635633|emb|CAZ83663.1| unnamed protein product [Tuber melanosporum]
Length = 524
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 54/184 (29%)
Query: 54 ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAP 113
++ W+C L Y QQDAHE+L FL+N +L A
Sbjct: 257 LTTSWKCEQTLA----------GYQQQDAHEYLQFLLN-----------------QLHAT 289
Query: 114 DGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN---- 169
+GG D + + +H F G L S+ C C+ V++ + DL +D+++
Sbjct: 290 NGGNTDTKTE---QCKCIIHRAFYGNLQSDVTCEGCQNVTTAVDPVMDLSLDLRKKDKRK 346
Query: 170 ------------TSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPD 217
++ +CL F+STE L N++ C+NC+ +QE K++
Sbjct: 347 LATPKTEGDGAMQTLQECLERFTSTEKL-GMNEYNCENCSGHQEVA-------TKQLTVK 398
Query: 218 RFPP 221
R PP
Sbjct: 399 RLPP 402
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 33/150 (22%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR-- 381
+ K + VK+LP +L + LKRF++ + K+ ++ FP++L + + A +
Sbjct: 390 VATKQLTVKRLPPVLCIQLKRFEHGS--TKSSKIDTKIRFPMQLDMAPYTTRAKRKAKDG 447
Query: 382 ----------------MYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQS 425
+Y+L++VV+H G N GHYI+ + + W FDD VV
Sbjct: 448 STDCGPKSSLKGHGPYLYDLLSVVVHTGQ-INSGHYINFSRENGQWFRFDDSVVT----- 501
Query: 426 TIEDFFGLTSDHQKSSETGYILFYQSRDST 455
L ++ S Y+LFY R T
Sbjct: 502 -------LATEKDVLSAKAYLLFYIIRSLT 524
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET-LLSCLADLFHNIATHKKK 285
G +N G+TC+ + VLQ+L R+ L K K+ + +SC + + K
Sbjct: 188 GFLNMGSTCFMSVVLQSLIHNPLVRNFYLADGHKPKECAQANCMSCAMEEVFSEFFATDK 247
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
P +T K + Y QQDAHE+L FL+N ++
Sbjct: 248 TDGFGPVNLLTTSWKCEQTLAGYQQQDAHEYLQFLLNQLH 287
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Y Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E L +N
Sbjct: 166 -IHDIFGGWWRSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENA 224
Query: 191 FKCDNCASYQEAQGPNISALEKEIGP 216
+ C C + P L I P
Sbjct: 225 YYCGRC----RQKMPASKTLHVHIAP 246
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY N+ LQ L P D +L + ++ + E C + +
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 286 VGSIA-PKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
G I P + +T F Y Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDIMKPSQILT------SAFHKYQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L L LKRF +K++R +V +P L+L+ + LS P
Sbjct: 238 KTLHVHIAPKVLLLVLKRFSAFTGNKLDR------KVSYPEFLDLKPY-LSQPTAGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 290 YALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 337
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY ++ +++ + RV+
Sbjct: 338 ENAYVLFYVQQNDLKQVSIDMPEGRVH 364
>gi|291224537|ref|XP_002732260.1| PREDICTED: ubiquitin specific peptidase 15-like [Saccoglossus
kowalevskii]
Length = 707
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 33/153 (21%)
Query: 212 KEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-------YKAKNKKN 264
KE + PP Y GL N GNTCY NSV+QAL +C F + +LE Y +K +N
Sbjct: 73 KEESKEYVPP---YTGLYNLGNTCYLNSVIQALRYCPEFNEGILEMGGDIDKYYSKQDEN 129
Query: 265 KET--------------LLSCLADLF-HNIATHKKKVG--------SIAPKKFITRLRKE 301
++ L+ +L H + + K V ++ P++ + LR
Sbjct: 130 DKSETNGKDSQLPAHFHLVKKTKELLEHMLKSEKGYVAKPTVDTDLAVKPQQLLETLRDL 189
Query: 302 KDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
F YMQ DA E L L++H+ + +++K+
Sbjct: 190 NPMFQGYMQHDAQELLRCLLSHVQDASQELRKI 222
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ-----------------NTSITQ 174
V ++FQG L T+CL CE + + E F D+ V ++ N S++
Sbjct: 459 VDKLFQGSLVMRTRCLECECSTERREVFQDVSVPVQSDNGNNDEDDDGGSPRPPNLSLSW 518
Query: 175 CLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+ F+ E L +NK+ C+ C + EA+
Sbjct: 519 AISEFACKERLTGNNKYYCETCIRHTEAE 547
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 69/118 (58%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F D V Y+L+
Sbjct: 704 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPFLAKDSPVQ-IVTYDLL 760
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 761 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 817
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 294 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 349
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 350 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 406
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 596 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 652
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 653 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 709
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 186 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 241
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 242 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 298
>gi|260828462|ref|XP_002609182.1| hypothetical protein BRAFLDRAFT_125949 [Branchiostoma floridae]
gi|229294537|gb|EEN65192.1| hypothetical protein BRAFLDRAFT_125949 [Branchiostoma floridae]
Length = 972
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GNTCY NS+LQALY FR +VL Y K +L+ L D+F + +H ++
Sbjct: 444 GLMNLGNTCYMNSILQALYMADEFRMKVLSYVPNGAKG---VLAQLQDVFAFL-SHTQRT 499
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
+ +P F+ R F QQD EFL +L++ I+E+ KK +L+
Sbjct: 500 -AYSPSTFLHTARPP--WFTPGSQQDCSEFLKYLLDRIDEEEKARKKAQALLS 549
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 563 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 619
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 620 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 676
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 591 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 647
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 648 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 704
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 172 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 227
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 228 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQT 286
Query: 338 L 338
+
Sbjct: 287 I 287
>gi|6910582|gb|AAF31287.1|AC006424_16 CDS [Arabidopsis thaliana]
Length = 887
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAK-NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS LQ L P + L+ Y++ N KN + LA F +
Sbjct: 297 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLW 356
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G ++AP+ F T+L + +F Y Q D+ E L FL++ ++E KVK+ P I A
Sbjct: 357 SSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 413
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD---RMY 383
K + + KLP IL HLKRF Y +R+ K + + LS N D +Y
Sbjct: 762 KKLDLWKLPDILVFHLKRFTY----SRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLY 817
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L A+ H G GHY + K D W FDD V +++S I+ +
Sbjct: 818 ELYAISNHYGGL-GGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIK------------T 864
Query: 442 ETGYILFYQSRDSTDART 459
Y+LFYQ R +D+ T
Sbjct: 865 SAAYVLFYQ-RVKSDSET 881
>gi|301604742|ref|XP_002932001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Xenopus
(Silurana) tropicalis]
Length = 185
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
S F Q+DAHEFL + ++ + + L +L D H+ + T
Sbjct: 33 SKNFRYGSQEDAHEFLRYTVDEMQKSCL------RGSCRL--------DRHT----QATT 74
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H++F G L S CL+C+ VS + + DL ++IK S+ Q L F E L DN
Sbjct: 75 LIHQVFGGYLRSRVTCLSCKAVSDTYDQYLDLTLEIKMAHSVNQALEQFVRPEQLDGDNA 134
Query: 191 FKCDNC 196
+KC C
Sbjct: 135 YKCSKC 140
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 28/141 (19%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHL--------SDDAVNP 379
+++LP +L LH+KRF++ + K+ R+ FP L++ F L S+ + N
Sbjct: 486 IRRLPNVLCLHIKRFRWNNFY--RTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCN- 542
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQK 439
+Y+L AV++H G+G + GHY S ++ W+ F+D V ++ S + +
Sbjct: 543 --IYDLAAVIVHHGNGSSCGHYTSYAINNGVWMHFNDHSVKEVSSSAVAEC--------- 591
Query: 440 SSETGYILFYQSRDSTDARTM 460
YILFY RD T+ +
Sbjct: 592 ---KPYILFYIKRDPTNTSRL 609
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 35/161 (21%)
Query: 73 EFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWV 132
+F + Q DAHEFL ++++ ++ +E Q + ++S+P S+ + P
Sbjct: 324 QFRGHRQHDAHEFLRYMLDRLH----TELQQVSFPVEISSPSAQKASETKSNPYNIPALS 379
Query: 133 H-----------EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN------------ 169
H +F GIL SE +CL C S K + F DL +DI +
Sbjct: 380 HLQSKGRNSIVTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYNKDPPESGEK 439
Query: 170 --------TSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+I+ CL F+ E L + C +C Q++
Sbjct: 440 DKEGNPPVCNISDCLASFTEVEELTETELYYCSSCKCKQKS 480
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 23/128 (17%)
Query: 224 RYFGLVNFGNTCYSNSVLQAL--------YFCKPFRDRVLEYKAKNKKNKETLLSCLADL 275
R GL N GNTC+ NSVLQ+L YF ++K K +++ ++ L D+
Sbjct: 227 RVVGLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSR-SMKENLDDV 285
Query: 276 FHNIATHKKKV------------GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
F + +KV G+I+P+ + K +F + Q DAHEFL ++++
Sbjct: 286 F--VVEELRKVLLNLSQGGDGSKGAISPECLFLVIWKVVPQFRGHRQHDAHEFLRYMLDR 343
Query: 324 INEKCMKV 331
++ + +V
Sbjct: 344 LHTELQQV 351
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 24/150 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ I+ + V L E GG+ +E T + IF G
Sbjct: 264 QEDAHEFMRLAIDTMQSVCLDEF---------------GGEKAVEPASQETTIIQHIFGG 308
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ C C +S++ E+ DL V+I + S+ +CL F+ E L +N +KCD C
Sbjct: 309 RLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFTDKEWLHGENMYKCDRCN 368
Query: 198 SYQEA-------QGPNISALE-KEIGPDRF 219
Y +A + PN+ + K RF
Sbjct: 369 DYVKAWKRLTIQRAPNVLTIALKRFQSGRF 398
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N VLQ L + +P +L+ K + K L + ++ +
Sbjct: 182 GLLNCGNSCFANVVLQCLTYTRPLVAYLLK-KGHQTECKHNDWCFLCEFQSHVERASQST 240
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHEF+ I+ + C+
Sbjct: 241 LPFSPINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCL 283
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P +L + LKRF+ R K++ RV FP L L + + +Y L AV
Sbjct: 377 LTIQRAPNVLTIALKRFQ----SGRFGKLNKRVTFPEMLDLSPYMSEGGDGTDVYKLYAV 432
Query: 389 VIHCG--SGPNRGHYISIVKS-HDFWLLFDDDVVDKID 423
V+H + GHYI K H W DD V ++
Sbjct: 433 VVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVE 470
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 563 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 619
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 620 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 676
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|312068520|ref|XP_003137252.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 783
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 72/136 (52%), Gaps = 20/136 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDRMY 383
K K+ P IL +HLKRF++ +++ VK+ ++V FP L+L F S + +Y
Sbjct: 367 KICKIIDPPEILCIHLKRFRH--ELSYSVKIRNKVTFPVHDLDLTPFIASFEKNKEPVLY 424
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+LVA + H G+ GHY++ K+ D W FDD +V +++ I D S
Sbjct: 425 DLVAFITHYGANAESGHYVAYCKNEMDDNWYEFDDTMVTRLE---IADIL---------S 472
Query: 442 ETGYILFYQSRDSTDA 457
+ Y+LFYQ R ST +
Sbjct: 473 KEAYVLFYQ-RQSTQS 487
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFR------DRVLEYKAKN-KKNKETLLSCLADLFHNI 279
GL N GNTCY N+ +QAL C PF D V + +K N E +S
Sbjct: 17 GLTNLGNTCYMNAAIQALSNCPPFSDFFRSVDSVASFASKILDNNGEPPVSRSFRCLLRS 76
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+++ I P+ F+ ++R + +F QQDA EF+ L++
Sbjct: 77 LWSEERSRCINPQLFLAQVRHQYPQFRGLAQQDAQEFIRCLLD 119
>gi|218197083|gb|EEC79510.1| hypothetical protein OsI_20578 [Oryza sativa Indica Group]
Length = 644
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 25/135 (18%)
Query: 79 QQDAHEFLNFLINHINEVILSER---PQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH-- 133
Q+DAHEFL ++I+ + L R P SNA +G G EE WV
Sbjct: 113 QEDAHEFLRYIIDACHTAGLRIRKRLPASNA-------NGDAG--------EEEVWVQGP 157
Query: 134 -----EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
E F G L S+ KCL C+ S+K ++ D+ +D+ + S+ L F E L
Sbjct: 158 CMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADALARFFQPEILEGS 217
Query: 189 NKFKCDNCASYQEAQ 203
NK+ C+ C A+
Sbjct: 218 NKYSCERCKKLTSAR 232
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 11/117 (9%)
Query: 228 LVNFGNTCYSNSVLQALY-------FCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIA 280
L N GNTCY NSVLQ L FC FR L K K+KE + + +
Sbjct: 25 LKNLGNTCYLNSVLQCLASTPPLATFCLSFRHSNLCKKVLPNKDKECVFCVVERQISRLL 84
Query: 281 THKKKVGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV-KKLP 335
+ + G++ +P K I L + F Q+DAHEFL ++I+ + +++ K+LP
Sbjct: 85 --RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLP 139
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 331 VKKLPMILALHLKRFKYMD--KMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
V + P +L + LKRF+ ++ K+NR+++ + L +++ + D++ +YNL
Sbjct: 237 VLRAPKVLVIQLKRFEGINGGKINRNIEFKETLF--LSDFMYNKNQDSL---PVYNLFGS 291
Query: 389 VIHCGSGPNRGHYISIVK-SHDFWLLFDDDVV------DKIDQSTIEDFFGLTSDHQKSS 441
++H G P+ GHY + VK + W +D + D + + F+ L++ QK S
Sbjct: 292 IVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHISPSSSQDVLSEKVYILFYILSTKTQKPS 351
Query: 442 ETGY 445
GY
Sbjct: 352 TNGY 355
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 572 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 628
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 629 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 685
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 211 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 255
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 569 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 625
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 626 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 682
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 150 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 205
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 206 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 262
>gi|297846262|ref|XP_002891012.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297336854|gb|EFH67271.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 894
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Query: 209 ALEKEIGPDRFPPNER--YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAK-NKKN 264
A E ++ F ER GL N GNTC+ NS LQ L P + L+ Y + N +N
Sbjct: 276 AFEDDVSSSTFGKGERRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYSSDINAEN 335
Query: 265 KETLLSCLADLFHNIATHKKKVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ LA F + G ++AP+ F T+L + +F Y Q D+ E L FL++
Sbjct: 336 PLGMRGELAIAFGELLRKLWSSGQNAVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLD 395
Query: 323 HINEKCMKVKKLPMILA 339
++E KVK+ P I A
Sbjct: 396 GLHEDLNKVKRKPYIEA 412
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 54/129 (41%), Gaps = 22/129 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD---RMY 383
K + + KLP IL HLKRF Y K+ V FP + LS N D +Y
Sbjct: 769 KKLDLWKLPDILVFHLKRFTYSRYFKN--KIDTLVNFP--IHGLDLSKYVTNKDGQSYLY 824
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L A+ H G GHY + K D W FDD V +++ I+ +
Sbjct: 825 ELYAISNHYGGL-GGGHYTAYAKLMDENKWYDFDDSRVSAVNEYEIK------------T 871
Query: 442 ETGYILFYQ 450
Y+LFYQ
Sbjct: 872 PAAYVLFYQ 880
>gi|222622509|gb|EEE56641.1| hypothetical protein OsJ_06049 [Oryza sativa Japonica Group]
Length = 897
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ + +E T + ++F G
Sbjct: 432 QEDAHEFLRHLVMSMQGACL---------------DGLGGEKQVEASLQETTLIQQMFGG 476
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L +N +KC C+
Sbjct: 477 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCS 536
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 537 AYVKAR 542
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 543 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLY 598
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 599 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAV------------SLNQVMSEG 646
Query: 444 GYILFY 449
Y+LFY
Sbjct: 647 AYMLFY 652
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 563 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 619
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 620 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 676
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|42562472|ref|NP_174562.2| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
gi|166201360|sp|Q9MAQ3.2|UBP11_ARATH RecName: Full=Putative ubiquitin carboxyl-terminal hydrolase 11;
AltName: Full=Deubiquitinating enzyme 11; Short=AtUBP11;
AltName: Full=Ubiquitin thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|332193411|gb|AEE31532.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Arabidopsis
thaliana]
Length = 892
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAK-NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS LQ L P + L+ Y++ N KN + LA F +
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLW 361
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G ++AP+ F T+L + +F Y Q D+ E L FL++ ++E KVK+ P I A
Sbjct: 362 SSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 418
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD---RMY 383
K + + KLP IL HLKRF Y +R+ K + + LS N D +Y
Sbjct: 767 KKLDLWKLPDILVFHLKRFTY----SRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLY 822
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L A+ H G GHY + K D W FDD V +++S I+ +
Sbjct: 823 ELYAISNHYGGL-GGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIK------------T 869
Query: 442 ETGYILFYQSRDSTDART 459
Y+LFYQ R +D+ T
Sbjct: 870 SAAYVLFYQ-RVKSDSET 886
>gi|84569929|gb|AAI10500.1| USP22 protein [Homo sapiens]
Length = 512
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 379 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 436
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 437 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 492
Query: 429 DFFGLTSDHQKSSETGYILFYQSR 452
D GY+LFY +
Sbjct: 493 DVL---------DSEGYLLFYHKQ 507
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 231 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 280
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 281 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 334
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 335 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 379
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 164 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 223
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 224 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 265
>gi|403275468|ref|XP_003929464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Saimiri
boliviensis boliviensis]
Length = 555
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FH 371
K + +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 424 KQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQ 481
Query: 372 LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDF 430
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 482 QPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDV 537
Query: 431 FGLTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 538 L---------DSEGYLLFYHKQ 550
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 274 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 323
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 324 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 377
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 378 NVVNGESHVAGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 422
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 207 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 266
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 267 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 308
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 563 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 619
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 620 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 676
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 604 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 660
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 661 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 717
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 186 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 241
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 242 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 298
>gi|325184619|emb|CCA19111.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 2874
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM---- 382
K + + +LP IL +HLKRF+Y + +KV R+ FP+ L +F + A N R
Sbjct: 2095 KRLSICRLPEILIIHLKRFEYDLERGMRIKVHDRLEFPMILDMFPFTKHAQNAQRTTLDA 2154
Query: 383 -----YNLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTI-EDFFGLTS 435
Y + V+H G+ + GHY SI++ W F+D +V D S I + FG +
Sbjct: 2155 CGALEYEFLGTVVHMGTA-HSGHYYSILREESGEWYEFNDTMVTPFDASRIPSECFGNSD 2213
Query: 436 DHQKSSETGYILFY 449
+ ++LFY
Sbjct: 2214 SQSIKKRSSFMLFY 2227
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 81/191 (42%), Gaps = 25/191 (13%)
Query: 136 FQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDN 195
F G ++++ KC T E FDL +++ CL S + + S
Sbjct: 1837 FSGNMSTQPKCRTDVT----REMAFDLLLEM--------CLENTSGLQRVLS-------- 1876
Query: 196 CASYQEAQG-PNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRV 254
C + Q A G N + K+ P+ R+ GL N G TCY N+ +QA + FR V
Sbjct: 1877 CLNAQHALGSTNTRSRRKKADAKPEHPHGRFVGLKNSGCTCYLNASMQAFFMMPRFRKAV 1936
Query: 255 LEYKAKNKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRK-EKDEFDNYMQQDA 313
L ++ K +K + L LF ++ K S PK FI L E D D QQDA
Sbjct: 1937 LCLESSEKGSKRLVFE-LQSLFAHLEALAKPYFS--PKAFIGALHSWEGDTIDVMEQQDA 1993
Query: 314 HEFLNFLINHI 324
EFL +
Sbjct: 1994 SEFLTLFFQQM 2004
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ + +E T + ++F G
Sbjct: 468 QEDAHEFLRHLVMSMQGACL---------------DGLGGEKQVEASLQETTLIQQMFGG 512
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L +N +KC C+
Sbjct: 513 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCS 572
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 573 AYVKAR 578
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDR-VLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY+N+VLQ L KP +L +K+ +K L C +L +T ++
Sbjct: 386 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMC--ELEQYASTLRES 443
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 444 GGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 487
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 579 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLY 634
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 635 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAV------------SLNQVMSEG 682
Query: 444 GYILFY 449
Y+LFY
Sbjct: 683 AYMLFY 688
>gi|414868202|tpg|DAA46759.1| TPA: hypothetical protein ZEAMMB73_550567 [Zea mays]
Length = 525
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAK-NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS +Q+L P LE Y + NK+N L LA F +
Sbjct: 313 GLHNLGNTCFMNSAIQSLVHTPPLVQYFLEDYTCEINKENPLGLQGELAIAFGELLRKLW 372
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G SIAP+ F ++L + +F Y Q D+ E L FL++ ++E +VK+ P I A
Sbjct: 373 SSGRTSIAPRAFKSKLSRFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKEKPYIEA 429
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 604 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 660
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 661 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 717
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 186 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 241
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 242 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 298
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 589 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 645
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 646 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 702
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 177 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKPAICKSYLKLMTELWH---- 232
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 233 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 289
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 142 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 184
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 185 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENGYHC 244
Query: 194 DNC 196
C
Sbjct: 245 SKC 247
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 255 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 307
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV+++ G + GHY VK+ + W DD V D + +
Sbjct: 308 VLYAVLVYAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 355
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 356 PAYVLFYMQK 365
>gi|149758247|ref|XP_001488653.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Equus
caballus]
Length = 480
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 351 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 408
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++IED
Sbjct: 409 MDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIEDVL- 463
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 464 --------DSEGYLLFYHKQ 475
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 199 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 248
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
S ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 249 SCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 302
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 303 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 347
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 132 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 191
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 192 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 233
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 597 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 653
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 654 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 710
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 177 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLVRTDKKPAICKSYLKLMTELWH---- 232
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 233 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 289
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 572 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 628
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 629 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 685
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 211 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 255
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 16/126 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL L+ + L DG GG+ + +E T + ++F G
Sbjct: 357 QEDAHEFLRHLVMSMQGACL---------------DGLGGEKQVEASLQETTLIQQMFGG 401
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
L S+ KCL C S + E+ DL ++I S+ L F++ E L +N +KC C+
Sbjct: 402 RLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLDGENMYKCGRCS 461
Query: 198 SYQEAQ 203
+Y +A+
Sbjct: 462 AYVKAR 467
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDR-VLEYKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL N GN+CY+N+VLQ L KP +L +K+ +K L C +L +T ++
Sbjct: 275 GLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMC--ELEQYASTLRES 332
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G ++P + ++ LR Q+DAHEFL L+ + C+
Sbjct: 333 GGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACL 376
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K + V ++P IL + LKRF+ ++ K++ V FP L + A + +Y L
Sbjct: 468 KQLSVHEVPNILTVVLKRFQ----TGKYGKINKCVTFPDMLDMVPFVTGAGDNPPLYFLY 523
Query: 387 AVVIHCGS--GPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AVV+H + GHYIS VK WL DD V + S +Q SE
Sbjct: 524 AVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAV------------SLNQVMSEG 571
Query: 444 GYILFY 449
Y+LFY
Sbjct: 572 AYMLFY 577
>gi|449303952|gb|EMC99959.1| hypothetical protein BAUCODRAFT_63002 [Baudoinia compniacensis UAMH
10762]
Length = 560
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 50/177 (28%)
Query: 76 NYMQQDAHEFLNFLINHINEVILSERP--------QSNAKSKLSAPDGGGGDNHSSSGFE 127
Y QQDAHEFLNF IN ++ I ++ AK K + D +
Sbjct: 259 GYSQQDAHEFLNFFINSLHTAITETDEAEDEENNNKTEAKQKAAEKDAK----------D 308
Query: 128 EPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNT----------------- 170
+H F G+LTS C C V++ + F DL +DI+
Sbjct: 309 CSCIIHTAFSGLLTSTVTCTACRNVTTALDPFLDLSLDIRSAAVSVKKKKLTMINGTTTV 368
Query: 171 ------SITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPP 221
+T+CL F+S ETL +D+ + C C QEA K++ R PP
Sbjct: 369 REVLPMDLTECLDRFTSAETLSADS-YHCRKCDKNQEAT--------KKLSLGRLPP 416
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 50/168 (29%)
Query: 322 NHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---------------- 365
N K + + +LP ++A+HLKRF + +++ K+ ++ +PL
Sbjct: 402 NQEATKKLSLGRLPPVVAVHLKRFSHSKSLSQSTKIETKIRYPLTADFTPYLTTPVPSNS 461
Query: 366 --------ELRLFHLSDD-----------AVNP-DRMYNLVAVVIHCGSGPNRGHYISIV 405
+ H DD A P D +Y L +VV+H G N GHY+S
Sbjct: 462 GKNKPKPQQQATGHAPDDEASAADTVDSSAYTPSDPIYELSSVVVHKGKIDN-GHYVSYS 520
Query: 406 KSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILFYQSR 452
+ + W FDD +V ++D+ + S Y+LFY +R
Sbjct: 521 RQAEHEWYRFDDSMVVQVDEK------------EALSAEAYMLFYVAR 556
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK-NKETLLSC-LADLFHNIATHKK 284
GL N G TC+ + +LQ+L R L K+ +E SC L D+F + +K
Sbjct: 178 GLYNMGQTCFMSVILQSLVHNPLIRSYFLSEGHKSSDCEREACTSCALDDIFTDFYGQEK 237
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
G A + K Y QQDAHEFLNF IN ++
Sbjct: 238 HEGYGA-VHMLQGCWKGGGGLAGYSQQDAHEFLNFFINSLH 277
>gi|395514897|ref|XP_003761647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like, partial
[Sarcophilus harrisii]
Length = 229
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 96 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 153
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 154 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 209
Query: 429 DFFGLTSDHQKSSETGYILFYQSR 452
D GY+LFY +
Sbjct: 210 DVL---------DSEGYLLFYHKQ 224
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 166 IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 60 VSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 96
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 77/158 (48%), Gaps = 26/158 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL ++I+++ K+ L+ DGG + +S +E T V+EIF G
Sbjct: 253 QEDAHEFLRYVIDNL------------WKAALANYDGGVKLDPAS---KETTVVNEIFGG 297
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
S+ C+ C+ S+ + F DL +DIK +S+ L F E L +DN +KC C
Sbjct: 298 YHRSQVTCMKCKEKSNTYDHFMDLILDIKNASSLETALEKFVEPELLQNDNAYKCPRCNI 357
Query: 199 YQEAQ-------GPNISALEKEIGPDRFPPNERYFGLV 229
AQ PN++ + + RF N + G +
Sbjct: 358 KVMAQKRFTVHRAPNVATFQLK----RFDANRMFGGKI 391
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GLVN GNTC+ N+V+Q L +C P + +L K K + +L ++ +K
Sbjct: 169 GLVNMGNTCFMNTVIQCLTYCPPLANYLLHQDDHCTKCKTLNFCMMCELQRHMKRALEKS 228
Query: 287 G-SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
G SI P RL+ F Q+DAHEFL ++I+++
Sbjct: 229 GDSIKPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNL 267
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 321 INHINEKCMKVKKLPMILALHLKRFKYMDKMNRHV--KVSHRVVFP--LELRLFHLSDDA 376
I + +K V + P + LKRF NR K++ V +P LELR + +SD
Sbjct: 357 IKVMAQKRFTVHRAPNVATFQLKRFD----ANRMFGGKITKHVSYPEHLELRPY-MSDKH 411
Query: 377 VNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
+P Y L AV++H G+ N GHY V+ S+ W DD V ++ + +
Sbjct: 412 GDP-VTYRLNAVLVHLGASCNSGHYFCYVRNSNGSWYCMDDSRVHQVSMGQVLN------ 464
Query: 436 DHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 465 ------QQAYVLFY 472
>gi|397466402|ref|XP_003804951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Pan paniscus]
Length = 513
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 380 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 437
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 438 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 493
Query: 429 DFFGLTSDHQKSSETGYILFYQSR 452
D GY+LFY +
Sbjct: 494 DVL---------DSEGYLLFYHKQ 508
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 232 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 281
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 282 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 335
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 336 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 380
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 224
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 225 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 266
>gi|389744531|gb|EIM85714.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+D+HEFL + I+ + + L+ P KL E TWVH++F G
Sbjct: 224 QEDSHEFLRYAIDALQKSCLAGYP-----PKLDP------------KLAETTWVHKLFGG 266
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S C +C S ++ DL +DI +S+ Q L+ F + ++L +K+KCD C
Sbjct: 267 KLRSRVTCQSCGHNSDTFDNILDLSIDIFGASSVQQALKKFVAIDSLKGADKYKCDAC 324
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 21/151 (13%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNPDRM 382
+ EK + + P++L +HLKRF + + K+ H + + +L L ++S+ P
Sbjct: 329 VAEKRFTIHEAPVVLTIHLKRFSPLGR-----KIGHAIKYDEKLTLAPYMSEGQFGPS-- 381
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L V+ H G GPN GHY + V+ + W +D+ V G+ +
Sbjct: 382 YALYGVISHAGGGPNSGHYYAHVRGPNGSWYEMNDETVTPA---------GMGGEAPTGL 432
Query: 442 ETGYILFY---QSRDSTDARTMNSNDCRVNG 469
+ Y+LFY + + A MN VNG
Sbjct: 433 RSAYMLFYVMEKGQALQAAVGMNGAGAYVNG 463
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNK-KNKETLLSC-LADLFHNIATHKK 284
GL N GNTC+ NS LQ L +L + + + K +SC L + N +H
Sbjct: 141 GLHNTGNTCFLNSALQCLLHTPGLLHILLAHTKTDPCRAKGFCMSCCLRGVLLN--SHFT 198
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+ S P + L Q+D+HEFL + I+ + + C+
Sbjct: 199 RQRSFTPAQVTNNLSAIAKHLRRGRQEDSHEFLRYAIDALQKSCL 243
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 573 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 629
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 630 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 686
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 14/118 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLP 335
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 211 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDP 267
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 572 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 628
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 629 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 685
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 211 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 255
>gi|123484010|ref|XP_001324162.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121907040|gb|EAY11939.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1855
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 101/269 (37%), Gaps = 51/269 (18%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N G TCY N+V+Q L + E + + + L +L + K+
Sbjct: 878 GLRNLGATCYLNAVIQQLLHLPMLFAEINELQPSS-----LWIDHLQELMREMKLTNKQF 932
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK----CMK------------ 330
P K I + + + QQDA EFL L+N + K C
Sbjct: 933 SD--PSKIIEEFNGFGTKLNPHEQQDASEFLLSLLNALPIKKHFECKIIDDDKGDDFLIL 990
Query: 331 ---------------VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDD 375
+ + P IL L L RF + K++ FPLE+
Sbjct: 991 PLSLEKDTLDLNDYIITQWPNILCLQLSRFDFSKSNGERYKINKAFTFPLEIDF------ 1044
Query: 376 AVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTS 435
+ Y L V+ H G+ P+ GHYIS V+ D W+L +D + + + F
Sbjct: 1045 ---GKKKYKLNGVINHKGT-PDSGHYISFVRKDDQWILINDTESSIVPE---DQFLQEVY 1097
Query: 436 DHQKSSETGYILFYQSRDSTDARTMNSND 464
H+ E+ Y++FY D T +D
Sbjct: 1098 GHKSQDESAYLIFYVQEGFNDRETHIPSD 1126
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KC +C+ S + F D+ +DI S+ Q L+ E LC +N
Sbjct: 166 -IHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENS 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGRC 230
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYN 384
K +K+ P +L L LKRF M + K+ +V +P L+L+ + LS P Y
Sbjct: 238 KTLKLYSAPKVLMLVLKRFS--GSMGK--KLDRKVSYPEFLDLKPY-LSQPTGGP-LPYA 291
Query: 385 LVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AV++H G+ + GHY VK+ H W DD V D +++ + E
Sbjct: 292 LYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLN------------EN 339
Query: 444 GYILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY ++ ++N + R++
Sbjct: 340 AYVLFYVQQNDLKKGSINMPEGRIH 364
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLAD------LFHNI 279
GL N GN+CY N+ LQ L P D +L + ++ + E C + L H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLH-- 109
Query: 280 ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
TH V + P + +T F Q+DAHEFL F + ++E C++V +
Sbjct: 110 -THSGDV--MKPSQNLT------SAFHKRKQEDAHEFLMFTLETMHESCLQVHR 154
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E S+++ ++ T +
Sbjct: 153 FHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHA-----------------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
IF G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 HIFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAQSVSQALEQLVKPEMLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P VL K K+T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQT--SC---MLCTLQAHMTRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
P + + L F + Q+DAHE+L F+++ + + C+
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACL 177
>gi|320581509|gb|EFW95729.1| deubiquitinating enzyme [Ogataea parapolymorpha DL-1]
Length = 491
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 219 FPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHN 278
F PN GLVN GNTCY NS LQ+L+ + R+R+ +Y ++ L+ L +LF
Sbjct: 108 FNPNNEPSGLVNLGNTCYLNSSLQSLFAVEELRNRLEKYTKNGTGVEQNLVFHLKELFDK 167
Query: 279 IATHKKKVGSIAPKKFITRLR------KEKDEFDNYMQQDAHEFLNFLINHI 324
++ KK I P F+T +R E+D+ Y QQDA E + +++ I
Sbjct: 168 MSQRNKK---ITPLNFLTTMRLSFPQFSERDDSGFYKQQDAEEAYSQILSAI 216
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 378 NPDRMYNLVAVVIHCGSGPNRGHYISIVK-----SHDFWLLFDDDVVDKIDQSTIEDFFG 432
NP +Y L++V+ H GS + GHY K + + W F+DD V + + IE G
Sbjct: 415 NPSSLYELISVIAHQGSSADSGHYQCFAKDQQDPTGENWYKFNDDKVTVVSRDKIEALAG 474
Query: 433 LTSDHQKSSETGYILFYQS 451
++ IL Y++
Sbjct: 475 -----GGEGDSALILMYKA 488
>gi|255727604|ref|XP_002548728.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
gi|240134652|gb|EER34207.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
Length = 534
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 17/126 (13%)
Query: 331 VKKLPMILALHLKRFKYM-------DKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
++KLP +L +HLKRF Y+ +K+ + + SH ++ P E+ L+ + P + Y
Sbjct: 416 IEKLPNVLIIHLKRFSYLKDQEIGVEKLRKKIDYSHDLIIPKEV----LATEPSTPIK-Y 470
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AVV H GS + GHY S + + W DD V +I + L + +++ +
Sbjct: 471 QLSAVVYHHGSSADAGHYTSDIHNAGVWWRIDDTFVKQIKNEEV-----LNAGTEENIKN 525
Query: 444 GYILFY 449
YIL Y
Sbjct: 526 AYILLY 531
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRD--RVLEYKAKNK--KNKETLLSCLADLFHNIATH 282
GL N GN CY NS+LQ L +C+PF +++E K+ + LL F+
Sbjct: 164 GLTNSGNICYMNSILQILLYCEPFNRLLKLIETKSIGSLGVSPTPLLDATITFFNQFQED 223
Query: 283 KKKVGSIAPKKFITRLRKEKDEFDNY---MQQDAHEFLNFLINHINEKCM 329
K ++P+ F + L K+ D+F + Q+DA EFL + I+ +N++ +
Sbjct: 224 SK--APVSPEDFYSSLTKQ-DKFSHLKWGQQEDAEEFLGYYIDGLNDEML 270
>gi|117558705|gb|AAI26899.1| USP22 protein [Homo sapiens]
Length = 513
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 380 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 437
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 438 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 493
Query: 429 DFFGLTSDHQKSSETGYILFYQSR 452
D GY+LFY +
Sbjct: 494 DVL---------DSEGYLLFYHKQ 508
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 232 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 281
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 282 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 335
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 336 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 380
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 224
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 225 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 266
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQAHLMRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 318
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G + GHY VK+ + W DD V D + +
Sbjct: 319 VLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 366
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 367 PAYVLFYMQK 376
>gi|392891844|ref|NP_001254305.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
gi|387912084|emb|CCH63799.1| Protein F07A11.4, isoform b [Caenorhabditis elegans]
Length = 948
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVL------EYKAKNKKNKETLLS-CLADLFH 277
Y GL N GNTC+ N+VLQ L R+ L E N E L+ AD H
Sbjct: 235 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 294
Query: 278 NIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
+ + +K +I P + + ++ +F N+ Q DAHEFL+FL++ ++E +VKK P+
Sbjct: 295 QMWSGHQK--AIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 351
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 327 KCMKVKKLPMILALHLKR-----FKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVN 378
K +++ +LP +L + LKR F Y M R K + V +PLE + F L++ + +
Sbjct: 795 KKLQLYRLPPVLIIQLKRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPF-LAETSPH 853
Query: 379 PDR-MYNLVAVVIHCGSGPNRGHYISIVKSHDF--------WLLFDDDVVDKIDQSTIED 429
P+ MY+L VV H G+ GHYIS+ + DF W FDD V + ST++
Sbjct: 854 PNSTMYDLTGVVCHSGNS-YFGHYISMGRLADFDSSKTKIEWRNFDDSTVARQSTSTLQ- 911
Query: 430 FFGLTSDHQKSSETGYILFYQSRDSTDARTM 460
+E Y+LFY+ RD R++
Sbjct: 912 -----------TEDAYLLFYKMRDQNVTRSI 931
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE--E 128
+ +F N+ Q DAHEFL+FL++ ++E + + K K P G ++H +
Sbjct: 317 ASQFANFAQHDAHEFLSFLLDGLHEDV------NRVKKK---PLTGTVESHGRHDLDVSN 367
Query: 129 PTWVHEI----------FQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
W + I F G L S +C NC+ VS + F L V +N T +
Sbjct: 368 EAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNKQSTDLI 425
>gi|334333006|ref|XP_001370855.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-A-like
[Monodelphis domestica]
Length = 880
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 747 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 804
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 805 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 860
Query: 429 DFFGLTSDHQKSSETGYILFYQ 450
D GY+LFY
Sbjct: 861 DVL---------DSEGYLLFYH 873
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 599 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 648
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 649 NC------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDG 702
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 703 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 747
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L +K + + L+ ++ LF + +
Sbjct: 532 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHR 591
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P + + + Y QQDAHEFL ++ ++ C
Sbjct: 592 S--PHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 633
>gi|297272148|ref|XP_001100993.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Macaca
mulatta]
Length = 660
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 527 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 584
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 585 YQQPTDSLNNDNKYSLFAVVNHQGTL-ESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 640
Query: 429 DFFGLTSDHQKSSETGYILFYQ 450
D GY+LFY
Sbjct: 641 DVL---------DSEGYLLFYH 653
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 343 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 402
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 403 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 444
>gi|410051732|ref|XP_003953155.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 22 [Pan troglodytes]
Length = 513
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 31/144 (21%)
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--------------- 369
+ K + +KKLP++ HLKRF++ K+ R K++ V FPLEL +
Sbjct: 380 STKQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQ 437
Query: 370 FHLSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIE 428
+ D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+
Sbjct: 438 YQQPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIK 493
Query: 429 DFFGLTSDHQKSSETGYILFYQSR 452
D GY+LFY +
Sbjct: 494 DVL---------DSEGYLLFYHKQ 508
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 232 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 281
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI---------------- 166
+ + +IF G L S+ C C VS+ + F+D+ +D+
Sbjct: 282 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 335
Query: 167 ---------KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
T++T CLR F+ E L S K KC C SYQE+
Sbjct: 336 NVVNGESHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 380
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 165 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 224
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 225 S--PHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 266
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKNKETLLSCLADLFHNIATH- 282
GL N GNTC+ NS LQ L P D L EY+A+ N+ N + +A+ + +
Sbjct: 281 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPLGMKGEIAEAYAELIKQM 340
Query: 283 -KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
+ +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 341 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 396
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 795 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPYVYDLIAVSN 850
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 851 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNVS------------LASEDQIVTKAAYVLF 897
Query: 449 YQSRD 453
YQ RD
Sbjct: 898 YQRRD 902
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE+L FL+ + + LS P+S PD T+V ++F G
Sbjct: 292 QEDAHEYLRFLLEALQQACLSRAPKS------LKPD---------DPIRRTTFVQKMFGG 336
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDNC 196
L S C NC S + F DL +D+++ S+T R F + + L K+KCD C
Sbjct: 337 KLRSRVTCHNCSHNSDTFDPFMDLSLDVRKGINSLTDAFRAFVAKDHLTGSEKYKCDKC 395
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 18/124 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K ++ P L +HLKRF K+S ++ F L + + P R Y L
Sbjct: 403 KQFTIESCPPALTVHLKRFTAFGG-----KISRQISFDESLNIAPYLSENRGPVR-YKLY 456
Query: 387 AVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
A V H GSGPN GHY++ VK+ W DD V +I + G +D ++ Y
Sbjct: 457 AAVHHYGSGPNSGHYVASVKAPCGKWTRMDDSHVSEIGRG------GPVND-----QSAY 505
Query: 446 ILFY 449
ILFY
Sbjct: 506 ILFY 509
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 218 RFPPNERYF--GLVNFGNTCYSNSVLQALYFCKPFRDRVL---------EYKAKNKKNKE 266
RFP R GL N+GNTCY NSV+Q+L P +L E+ K N +
Sbjct: 192 RFPGKVRSIATGLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLETLHGEWGGKPNVNFD 251
Query: 267 TLLSCLADLFHNIATH--KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
+++ N A + + AP++F L+ Q+DAHE+L FL+ +
Sbjct: 252 AVIA-----MQNFAKRSLQGTRPTNAPQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEAL 306
Query: 325 NEKCMKVKKLPMILALHLKRFKYMDKM 351
+ C+ + ++R ++ KM
Sbjct: 307 QQACLSRAPKSLKPDDPIRRTTFVQKM 333
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 122 TSAFHKRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSP----------------- 164
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KC +C+ S + F D+ +DI S+ Q L+ E LC +N
Sbjct: 165 -IHDIFGGWWRSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENS 223
Query: 191 FKCDNC 196
+ C C
Sbjct: 224 YYCGRC 229
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRMYN 384
K +K+ P +L L LKRF M + K+ +V +P L+L+ + LS P Y
Sbjct: 237 KTLKLYSAPKVLMLVLKRFS--GSMGK--KLDRKVSYPEFLDLKPY-LSQPTGGP-LPYA 290
Query: 385 LVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AV++H G+ + GHY VK+ H W DD V D +++ + E
Sbjct: 291 LYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLN------------EN 338
Query: 444 GYILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY ++ ++N + R++
Sbjct: 339 AYVLFYVQQNDLKKGSINMPEGRIH 363
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 221 PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK-AKNKKNKETLLSCLAD----- 274
P GL N GN+CY N+ LQ L P D +L + ++ + E C +
Sbjct: 45 PQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQ 104
Query: 275 -LFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
L H TH V + P + +T F Q+DAHEFL F + ++E C++V +
Sbjct: 105 SLLH---THSGDV--MKPSQILT------SAFHKRKQEDAHEFLMFTLETMHESCLQVHR 153
>gi|27503316|gb|AAH42353.1| LOC398480 protein [Xenopus laevis]
Length = 973
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P L + K + N+E L ++ A +++
Sbjct: 321 GLSNLGNTCFMNSALQCLSNSPPLTRYFLTDEYKKEINRENPLGMKGEIAVAYAELIRQI 380
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 381 WSGDHSYVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 436
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 22/130 (16%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR + V +R ++S+ +P +Y+LVAV
Sbjct: 832 LPKILVVHLKRFSY----NRFWRDKLDAVVEFPIRDLNMSEFVCDPQAGPFVYDLVAVSD 887
Query: 391 HCGSGPNRGHYISIVKSH--DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G GHY + K+ D W FDD V S+ Q ++ Y+LF
Sbjct: 888 HYGGM-GGGHYTAYAKNQDKDQWYYFDDSSVSP------------ASEDQIVTKAAYVLF 934
Query: 449 YQSRDSTDAR 458
YQ +D+ D +
Sbjct: 935 YQRQDNVDCK 944
>gi|449281395|gb|EMC88475.1| Ubiquitin carboxyl-terminal hydrolase 22, partial [Columba livia]
Length = 424
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%), Gaps = 31/142 (21%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FH 371
K + +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 293 KQLTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQ 350
Query: 372 LSDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDF 430
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 351 QPTDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDV 406
Query: 431 FGLTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 407 L---------DSEGYLLFYHKQ 419
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 143 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 192
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 193 NC------IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSDG 246
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 247 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 291
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L +K + + L+ ++ LF + +
Sbjct: 76 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHR 135
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P + + + Y QQDAHEFL ++ ++ C
Sbjct: 136 --SPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 177
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L P + + A T++H++F G
Sbjct: 167 QEDAHEFLRYTVDAMQKSCL---PGTKLDRQTQAT----------------TFIHQVFGG 207
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + F D+ ++IK S+++ L F E L +N +KC C
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKC 265
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 219 FPPNERYF----------GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETL 268
FPP Y GL N GNTC+ NS LQ L + PF + +L + ++
Sbjct: 66 FPPERIYLKWTQVHRIGAGLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSKTCHEPGF 125
Query: 269 LSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
H I I P + L++ F Q+DAHEFL + ++ + + C
Sbjct: 126 CMMCTMQNHIIQVFANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSC 185
Query: 329 MKVKKL 334
+ KL
Sbjct: 186 LPGTKL 191
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL------------PMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ +L L LKRF K++ V +P L+LR F +
Sbjct: 261 KCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGG----KITKDVKYPEYLDLRPF-M 315
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P ++Y L AV++H G + GHY +K S+ W +D V +I D
Sbjct: 316 SQSQGEP-QVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSV------SISDIR 368
Query: 432 GLTSDHQKSSETGYILFY 449
+ ++ Y+LFY
Sbjct: 369 SVL------NQQAYVLFY 380
>gi|348560267|ref|XP_003465935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cavia
porcellus]
Length = 525
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 396 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 453
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 454 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 508
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 509 --------DSEGYLLFYHKQ 520
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 244 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 293
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI---------------- 166
+ + +IF G L S+ C C VS+ + F+D+ +D+
Sbjct: 294 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 347
Query: 167 ---------KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
T++T CLR F+ E L S K KC C SYQE+
Sbjct: 348 SVVNGESHASGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 392
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L + + + L+ ++ LF + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHHCEMQSPSSCLVCEMSSLFQEFYSGHR 236
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 237 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 278
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D HS + T V +IF G
Sbjct: 195 QEDAHEFLRYTVDAMQKACL------NGSTKL--------DRHSQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KC+NC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N+ LQ L + P + +L ++ +K E + + +I
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHE-HSKICHEQGFCMMCTMQAHITQALNNP 170
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G+ I P I LR+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 GNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL 214
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 47 QTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNA 106
+T+LQ + ++ L C S F N Q+DAHE + L+ +++ L
Sbjct: 153 KTALQSTGKIVTPSQIVKNLR-CISRSFRNSRQEDAHELMVNLLESMHKCCLPS------ 205
Query: 107 KSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
G + S S +E+ + VH+IF G L S+ KC C S+K + F DL +DI
Sbjct: 206 ----------GVPSESPSAYEK-SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 254
Query: 167 KQNTSITQCLRGFSSTETL-CSDNKFKCDNC 196
+ TS+ + L+ F++ E L + +++C C
Sbjct: 255 GKATSLVRALQNFTAEELLDGGEKQYQCQRC 285
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL N GNTCY NSVLQ L + +PF + K+K + T C L L +++ T +
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYL--QSGKHKSSCRTAGFCALCALQNHVKTALQS 158
Query: 286 VGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G I P + + LR F N Q+DAHE + L+ +++ C+
Sbjct: 159 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL 203
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+ +K + K P +L +HLKRF N K+ +V F L L D+ D Y
Sbjct: 290 VAKKKFTIDKAPYVLTIHLKRF---SPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKY 346
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L V++H G GHY V+ S W DD+ V ++ ++ + +
Sbjct: 347 SLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV------------LRQ 394
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 395 KAYMLFY 401
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPERP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQAHLTRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L L H LS+ P +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSNLTGNKMTKEVQ------YPERLDLQHYLSEQRAGP-LVY 318
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKID 423
L AV++H G + GHY +K+ + W DD V D
Sbjct: 319 VLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKMDDAKVSSCD 359
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMYNL 385
K K+ LP I+ LHLKRF Y + N K+ + F EL L L R Y L
Sbjct: 439 KSFKIHALPKIMILHLKRFSYGN--NGSTKIYKPLGFTSELVLSRDLLSSPSQEGRKYEL 496
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VA + H G P RGHY + K D WL FDDD V + ++ + +
Sbjct: 497 VATITHHGRDPYRGHYTAHAKHADGQWLRFDDDAVVPVGENDVLH------------DQA 544
Query: 445 YILFYQ 450
Y+LFY+
Sbjct: 545 YVLFYK 550
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPF-------RDR-VLEYKAKNKKNKETLLSCLADLFHN 278
GL N GN C+ N+ LQAL C PF R+R + ++ + L+S L +
Sbjct: 203 GLRNTGNICFLNATLQALLSCSPFVHLLQDLRNRSIPKFGYPTLRAFVELISQFDVLDES 262
Query: 279 IATHKKKVGSIA-----PKKFITRLRKEKDEFDNYM-----QQDAHEFLNFLINHINEKC 328
+ K+K ++A P F LR + + Q+DA EFL+F ++ ++++
Sbjct: 263 VNKKKEKATTVAAKPLNPAMFDDVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRVHDEL 322
Query: 329 MKV 331
+K+
Sbjct: 323 LKL 325
>gi|21619540|gb|AAH31366.1| Usp33 protein, partial [Mus musculus]
Length = 685
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 9/121 (7%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMY 383
K KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y
Sbjct: 344 KFCKVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTY 400
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+L++V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSS
Sbjct: 401 DLLSVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSS 459
Query: 442 E 442
E
Sbjct: 460 E 460
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPSMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 263 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 305
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 306 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHC 365
Query: 194 DNC 196
C
Sbjct: 366 SKC 368
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + TH +V
Sbjct: 191 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQTHLMRV 245
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 246 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 292
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 376 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 428
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G + GHY VK+ + W DD V D + +
Sbjct: 429 VLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 476
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 477 PAYVLFYMQK 486
>gi|242001040|ref|XP_002435163.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215498493|gb|EEC07987.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 844
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 7/101 (6%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GLVN GNTCY+NSVLQALY R+ +L+ N T L L +LF + ++
Sbjct: 406 GLVNLGNTCYANSVLQALYMTSRLRNELLQ---TNSIPAGTNLKRLQELFAFLMLSQRP- 461
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
+++P+ F+++ R E+ QQD EFL FL++ ++E+
Sbjct: 462 -AVSPESFLSKSRPSWFEWGE--QQDCSEFLRFLVDSLHEE 499
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 43/159 (27%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
QQD EFL FL++ ++E + R A P GGG +S T V E+F G
Sbjct: 482 QQDCSEFLRFLVDSLHEEHRAHRLWRPAAD----PKGGGASAAASR-----TLVEEVFGG 532
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT---------------------------- 170
+ + CL C S +E DL + + +
Sbjct: 533 SVKTTYHCLTCGRDSVNEEAIMDLHLAFPEGSVTKDGGGADAKSGQRRLASKEGGGEEAA 592
Query: 171 ------SITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
S+ L + E++ DNK+ C+ C + ++A+
Sbjct: 593 APPRPLSVEDLLESYFEPESMEGDNKYHCNACGALRDAR 631
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRM-YNL 385
+ + + + P L L L RF Y + K+ H V +P +L L ++ +R Y L
Sbjct: 632 RTVALAEPPRHLILTLMRFSYDNATRTRSKILHNVAYP---KLLVLPENCGLAERAAYAL 688
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFW 411
AVV+H G+ +RGHY + + W
Sbjct: 689 YAVVVHSGTSADRGHYYTARHATGAW 714
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L P + + A T++H++F G
Sbjct: 197 QEDAHEFLRYTVDAMQKSCL---PGTKLDRQTQAT----------------TFIHQVFGG 237
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCL+C+ VS + F D+ ++IK S+++ L F E L +N +KC C
Sbjct: 238 YLRSRVKCLSCKAVSDTFDPFLDITLEIKMAPSVSKALEQFVKPEQLDGENAYKCTKC 295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L + P + +L + +K +E + + ++I
Sbjct: 114 GLQNMGNTCFLNSALQCLTYTPPLANHMLS-REHSKTCQEPGFCMMCTMQNHIIQVFANS 172
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
G+ I P + L++ F Q+DAHEFL + ++ + + C+ KL
Sbjct: 173 GNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKL 221
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL------------PMILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L+LR F +
Sbjct: 291 KCTKCKKMVTASKRFTIHRSPNVLTLSLKRFANFTGG----KITKDVKYPESLDLRPF-M 345
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P + Y L AV++H G + GHY +K S+ W +D V D ++ +
Sbjct: 346 SQSQGEP-QNYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLN-- 402
Query: 432 GLTSDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 403 ----------QQAYVLFY 410
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 47 QTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNA 106
+T+LQ + ++ L C S F N Q+DAHE + L+ +++ L
Sbjct: 112 KTALQSTGKIVTPSQIVKNLR-CISRSFRNSRQEDAHELMVNLLESMHKCCLPS------ 164
Query: 107 KSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
G + S S +E+ + VH+IF G L S+ KC C S+K + F DL +DI
Sbjct: 165 ----------GVPSESPSAYEK-SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 213
Query: 167 KQNTSITQCLRGFSSTETL-CSDNKFKCDNC 196
+ TS+ + L+ F++ E L + +++C C
Sbjct: 214 GKATSLVRALQNFTAEELLDGGEKQYQCQRC 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL N GNTCY NSVLQ L + +PF + K+K + T C L L +++ T +
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYL--QSGKHKSSCRTAGFCALCALQNHVKTALQS 117
Query: 286 VGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G I P + + LR F N Q+DAHE + L+ +++ C+
Sbjct: 118 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL 162
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+ +K + K P +L +HLKRF N K+ +V F L L D+ D Y
Sbjct: 249 VAKKKFTIDKAPYVLTIHLKRF---SPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKY 305
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L V++H G GHY V+ S W DD+ V ++ ++ + +
Sbjct: 306 SLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV------------LRQ 353
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 354 KAYMLFY 360
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAK-NKKNKETLLSCLADLFHNIATH- 282
GL N GNTC+ NS LQ L P D L EY+A+ N+ N + +A+ + +
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRINPLGMKGEIAEAYAELIKQM 362
Query: 283 -KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
+ +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNQSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 326 EKCMKVKKLPMILALHLKRFK----YMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNP 379
EK +K++K+P++ HLKRFK +++K+ +H++ FPLEL L + L
Sbjct: 280 EKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLE------FPLELDLKPYTLGGKDAEV 333
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQ 438
+ Y L A+V H G GHY S V+S D W DD +V + + +
Sbjct: 334 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYV----------- 382
Query: 439 KSSETGYILFYQSRDST 455
S YIL Y+ + ++
Sbjct: 383 -LSREAYILLYKRKGTS 398
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
I L L S F Y Q+DAHEF+ ++ + ++SE G D S
Sbjct: 158 ITTLALDFSSFFWRYQQEDAHEFMQCFLDKLERCMVSE----------------GKDRVS 201
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
S E+ V+++F G L S C NC S E DL ++I+ S++ L F+
Sbjct: 202 S---EDDDLVNKVFGGRLISNLCCCNCGHCSETHEPLVDLSLEIENVDSLSSALESFTKV 258
Query: 183 ETLC-SDNKFKCDNC 196
E + + KFKC+NC
Sbjct: 259 ERIGDPETKFKCENC 273
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 47 QTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNA 106
+T+LQ + ++ L C S F N Q+DAHE + L+ +++ L
Sbjct: 112 KTALQSTGKIVTPSQIVKNLR-CISRSFRNSRQEDAHELMVNLLESMHKCCLPS------ 164
Query: 107 KSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
G + S S +E+ + VH+IF G L S+ KC C S+K + F DL +DI
Sbjct: 165 ----------GVPSESPSAYEK-SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 213
Query: 167 KQNTSITQCLRGFSSTETL-CSDNKFKCDNC 196
+ TS+ + L+ F++ E L + +++C C
Sbjct: 214 GKATSLVRALQNFTAEELLDGGEKQYQCQRC 244
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL N GNTCY NSVLQ L + +PF + K+K + T C L L +++ T +
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYL--QSGKHKSSCRTAGFCALCALQNHVKTALQS 117
Query: 286 VGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G I P + + LR F N Q+DAHE + L+ +++ C+
Sbjct: 118 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL 162
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+ +K + K P +L +HLKRF N K+ +V F L L D+ D Y
Sbjct: 249 VAKKKFTIDKAPYVLTIHLKRF---SPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKY 305
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L V++H G GHY V+ S W DD+ V ++ ++ + +
Sbjct: 306 SLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV------------LRQ 353
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 354 KAYMLFY 360
>gi|397568230|gb|EJK46029.1| hypothetical protein THAOC_35324 [Thalassiosira oceanica]
Length = 753
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 321 INHINEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLF-HLSDDAVNP 379
+ + K +++ P +L ++ KRF Y D R ++S V FPL L + ++S
Sbjct: 422 LKRVMTKGLRLATAPTMLVINYKRFAY-DMYGRMSRLSKPVHFPLRLEIGEYMSRANRGK 480
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTI 427
+ Y LVAV++H G +RGHY + V+ W L +D VV K+D S +
Sbjct: 481 PQPYTLVAVLVHRGRSCDRGHYFAYVRKGKDWYLCNDSVVTKVDVSEV 528
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 75/202 (37%), Gaps = 40/202 (19%)
Query: 77 YMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIF 136
Y Q+DAHEF L++ + ++LS+ +F
Sbjct: 330 YQQEDAHEFFRSLLSALT--------MHGQNARLSS----------------------LF 359
Query: 137 QGILTSETKCLNCETVSSKDEDFFDLQVDIKQN-TSITQCLRGFSSTETLCSDNKFKCDN 195
G+L S C C S + + DL +DI N ++ L F+ ETL NK C
Sbjct: 360 DGLLESSLVCQTCGKTSLTRDRYMDLSLDITGNVATLDGALEKFTEEETLSDSNKVFCSR 419
Query: 196 CASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
C + + L P N + F +G + + + ++F P R +
Sbjct: 420 C----QLKRVMTKGLRLATAPTMLVINYKRFAYDMYGRM---SRLSKPVHF--PLRLEIG 470
Query: 256 EYKAKNKKNKETLLSCLADLFH 277
EY ++ + K + +A L H
Sbjct: 471 EYMSRANRGKPQPYTLVAVLVH 492
>gi|297813507|ref|XP_002874637.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297320474|gb|EFH50896.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 913
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + N++ L +L KK+
Sbjct: 301 GLSNLGNTCFMNSALQCLAHTPPIVDYFLQ-DYSDDINRDNPLGMCGELAIAFGDLLKKL 359
Query: 287 GS----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T+L + +F Y Q D+ E L FL++ ++E KVK+ P I
Sbjct: 360 WSSRNAVAPRSFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 414
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 21/144 (14%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE-LRLFHLSDDAVNPDRMYNL 385
K + + KLP IL HLKRF Y + K+ V FP++ L L + +Y L
Sbjct: 783 KKLDLWKLPDILVFHLKRFTYSRYLKN--KIDTFVNFPIQDLDLSKYVKNKNGQSYLYEL 840
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
A+ H G GHY + K D W FDD V +++S I++
Sbjct: 841 YAISNHYGGL-GGGHYTAYAKLIDDNKWYHFDDSHVSSVNESEIKN------------SA 887
Query: 444 GYILFYQ---SRDSTDARTMNSND 464
Y+LFY+ S T M+ +D
Sbjct: 888 AYVLFYRRVGSETETQTAEMSRSD 911
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 47 QTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNA 106
+T+LQ + ++ L C S F N Q+DAHE + L+ +++ L
Sbjct: 153 KTALQSTGKIVTPSQIVKNLR-CISRSFRNSRQEDAHELMVNLLESMHKCCLPS------ 205
Query: 107 KSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
G + S S +E+ + VH+IF G L S+ KC C S+K + F DL +DI
Sbjct: 206 ----------GVPSESPSAYEK-SLVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDI 254
Query: 167 KQNTSITQCLRGFSSTETL-CSDNKFKCDNC 196
+ TS+ + L+ F++ E L + +++C C
Sbjct: 255 GKATSLVRALQNFTAEELLDGGEKQYQCQRC 285
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC-LADLFHNIATHKKK 285
GL N GNTCY NSVLQ L + +PF + K+K + T C L L +++ T +
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYL--QSGKHKSSCRTAGFCALCALQNHVKTALQS 158
Query: 286 VGSI-APKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G I P + + LR F N Q+DAHE + L+ +++ C+
Sbjct: 159 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCL 203
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 16/127 (12%)
Query: 324 INEKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMY 383
+ +K + K P +L +HLKRF N K+ +V F L L D+ D Y
Sbjct: 290 VAKKKFTIDKAPYVLTIHLKRF---SPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKY 346
Query: 384 NLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+L V++H G GHY V+ S W DD+ V ++ ++ + +
Sbjct: 347 SLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADV------------LRQ 394
Query: 443 TGYILFY 449
Y+LFY
Sbjct: 395 KAYMLFY 401
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKA-----KNKKNKETLLSCLADLFHNIAT 281
GL N GNTC+ NS+LQ L K RD L+ + N + + L+S A L + T
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 271
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLP 335
S++P +F T++++ F Y QQDA EFL FL++ ++ + +V P
Sbjct: 272 SSPN-DSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHSEVNRVLVRP 324
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 19/137 (13%)
Query: 73 EFDNYMQQDAHEFLNFLIN----HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF-- 126
F Y QQDA EFL FL++ +N V++ RP++NA + PD D S +
Sbjct: 293 RFVGYNQQDAQEFLRFLLDGLHSEVNRVLV--RPRANADTLDHLPD----DEKSRQMWRR 346
Query: 127 ---EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN----TSITQCLRGF 179
E + V ++F G L S C C S+ + F+DL + I + ++ CLR F
Sbjct: 347 YQEREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEVTLMDCLRLF 406
Query: 180 SSTETLCSDNKFKCDNC 196
+ + L D K C C
Sbjct: 407 TKEDVLDGDEKPTCCRC 423
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 64/130 (49%), Gaps = 22/130 (16%)
Query: 327 KCMK---VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL-ELRLFHLSDDAVNPDRM 382
+C K ++K P IL LHLKRF + R K+S V FPL +L L + + N +
Sbjct: 428 RCTKKFSIQKFPKILVLHLKRFS--EARIRASKLSTFVNFPLKDLDLREFASQSCN-HAV 484
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKS 440
YNL AV H G+ GHY + KS W F+D V ++S H +S
Sbjct: 485 YNLYAVSNHSGTTMG-GHYTAYCKSPISSEWHSFNDSRVTP-----------MSSSHVRS 532
Query: 441 SETGYILFYQ 450
S+ Y+LFY+
Sbjct: 533 SD-AYLLFYE 541
>gi|260800015|ref|XP_002594932.1| hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae]
gi|229280170|gb|EEN50943.1| hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae]
Length = 697
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 17/127 (13%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNPDRMYN 384
K + + KLP IL LHLKRF++ + +R K++ V F EL + + D D MY
Sbjct: 520 KQLLITKLPQILRLHLKRFRWSGRNHRE-KINVHVDFGEELDIAPYCYVPDGSEVDTMYC 578
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AVVIH G G GHY + + + FW+ F+D ++D S+IED +
Sbjct: 579 LQAVVIHHGRGFGSGHYTAYCWNDEAGFWVHFND---SRLDLSSIEDVV---------AG 626
Query: 443 TGYILFY 449
YILFY
Sbjct: 627 QAYILFY 633
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 22/38 (57%)
Query: 218 RFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVL 255
R P GL N GNTCY NS+LQ L + FRD VL
Sbjct: 220 RAPITPGVTGLRNLGNTCYMNSILQVLSHLQKFRDLVL 257
>gi|392891842|ref|NP_001254304.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
gi|3875534|emb|CAA91317.1| Protein F07A11.4, isoform a [Caenorhabditis elegans]
Length = 1095
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 225 YFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET-------LLSCLADLFH 277
Y GL N GNTC+ N+VLQ L R+ L + + N+ L AD H
Sbjct: 422 YTGLRNIGNTCFMNAVLQMLVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMH 481
Query: 278 NIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
+ + +K +I P + + ++ +F N+ Q DAHEFL+FL++ ++E +VKK P+
Sbjct: 482 QMWSGHQK--AIEPTQIKNIVAEKASQFANFAQHDAHEFLSFLLDGLHEDVNRVKKKPL 538
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 31/151 (20%)
Query: 327 KCMKVKKLPMILALHLKR-----FKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVN 378
K +++ +LP +L + LKR F Y M R K + V +PLE + F L++ + +
Sbjct: 942 KKLQLYRLPPVLIIQLKRFVYTAFTYQSSMARRSKDTRSVEYPLESLDMSPF-LAETSPH 1000
Query: 379 PDR-MYNLVAVVIHCGSGPNRGHYISIVKSHDF--------WLLFDDDVVDKIDQSTIED 429
P+ MY+L VV H G+ GHYIS+ + DF W FDD V + ST++
Sbjct: 1001 PNSTMYDLTGVVCHSGNS-YFGHYISMGRLADFDSSKTKIEWRNFDDSTVARQSTSTLQ- 1058
Query: 430 FFGLTSDHQKSSETGYILFYQSRDSTDARTM 460
+E Y+LFY+ RD R++
Sbjct: 1059 -----------TEDAYLLFYKMRDQNVTRSI 1078
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 21/118 (17%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFE--E 128
+ +F N+ Q DAHEFL+FL++ ++E + + K K P G ++H +
Sbjct: 504 ASQFANFAQHDAHEFLSFLLDGLHEDV------NRVKKK---PLTGTVESHGRHDLDVSN 554
Query: 129 PTWVHEI----------FQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
W + I F G L S +C NC+ VS + F L V +N T +
Sbjct: 555 EAWKNHILRNDSIFVDLFHGQLKSHVQCPNCDRVSITFDPFVYLPVPFPKNKQSTDLI 612
>gi|5689463|dbj|BAA83015.1| KIAA1063 protein [Homo sapiens]
Length = 593
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 464 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 521
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 522 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 576
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 577 --------DSEGYLLFYHKQ 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 312 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 361
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 362 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 415
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 416 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 460
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 245 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 304
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 305 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 346
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + TH +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQTHLMRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFH-LSDDAVNPDRMY 383
K + + P +L L L+RF + +KM + V+ +P L + H LS+ P +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQ------YPERLDMQHYLSEQRAGP-LVY 318
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
L AV++H G + GHY VK+ + W DD V D + +
Sbjct: 319 VLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTC------------ALRQ 366
Query: 443 TGYILFYQSR 452
Y+LFY +
Sbjct: 367 PAYVLFYMQK 376
>gi|388855753|emb|CCF50741.1| related to UBP12-ubiquitin C-terminal hydrolase [Ustilago hordei]
Length = 1422
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 208 SALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET 267
+A+++ IGP R GL N GNTC+ NS LQ L + + K + N +
Sbjct: 524 TAVDRTIGPSRG-----LRGLNNLGNTCFMNSALQCLSNTYELQQYFVSGAYKQELNTDN 578
Query: 268 LLS---CLADLFHNIATH--KKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
L +AD F N+ T+ + GS P++F L + +F Y Q D+ E L FL++
Sbjct: 579 PLGMGGAIADAFGNLITNIWNGQGGSFWPREFKFALSRFAPQFSGYAQHDSQELLAFLLD 638
Query: 323 HINEKCMKVKKLPMILA 339
++E ++ K P I A
Sbjct: 639 GLHEDLNRILKKPYIEA 655
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 20/107 (18%)
Query: 73 EFDNYMQQDAHEFLNFLINHINE---VILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEP 129
+F Y Q D+ E L FL++ ++E IL K + APD GGD F +
Sbjct: 620 QFSGYAQHDSQELLAFLLDGLHEDLNRILK-------KPYIEAPDWEGGDEKDLVAFAKR 672
Query: 130 TW----------VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
W + ++FQG S C C +S K + F L + I
Sbjct: 673 QWDIYKARNDSVIVDLFQGQYRSTLVCPECNKISIKFDPFMYLTLPI 719
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 64/147 (43%), Gaps = 23/147 (15%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGF----EEP 129
F Y QQDAHEFL +L++H++ + Q N S P NH+S
Sbjct: 257 FRGYQQQDAHEFLRYLLDHLHREM-----QGNKNGSPSPPVTSDEPNHASESKCFINGTS 311
Query: 130 TWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQ--------------NTSITQC 175
T V +F G+L +E CL C T S K + F DL +DI +++ C
Sbjct: 312 TIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDC 371
Query: 176 LRGFSSTETLCSDNKFKCDNCASYQEA 202
LR F+ E L + C C Q++
Sbjct: 372 LRSFTDLEELDETELYMCHKCKKRQKS 398
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFP---LELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FP L+++ + L + P+R +Y+L
Sbjct: 404 IQKLPKVLCLHLKRFHWTAFLRN--KVDTYVEFPMCGLDMKSYLLEPENSLPERCLYDLA 461
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + + W F+D V L S+ YI
Sbjct: 462 AVVVHHGSGIGSGHYTAYGRHEGQWYHFNDSTVT------------LVSEEAVLKAKAYI 509
Query: 447 LFYQSRDSTDART 459
LFY ++++
Sbjct: 510 LFYTEHSDRESQS 522
>gi|262118284|ref|NP_001160039.1| ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
gi|229558005|sp|P0C8Z3.1|UBP22_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 22; AltName:
Full=Deubiquitinating enzyme 22; AltName: Full=Ubiquitin
thioesterase 22; AltName:
Full=Ubiquitin-specific-processing protease 22
gi|296476572|tpg|DAA18687.1| TPA: ubiquitin carboxyl-terminal hydrolase 22 [Bos taurus]
Length = 514
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 385 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 442
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K + + D
Sbjct: 443 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITKASIADVLD--- 498
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 499 ---------SEGYLLFYHKQ 509
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 233 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 282
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 283 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSES 336
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 337 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 381
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 166 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 225
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 226 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 267
>gi|402899046|ref|XP_003912516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Papio anubis]
Length = 525
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 396 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 453
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 454 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 508
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 509 --------DSEGYLLFYHKQ 520
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 244 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 293
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI---------------- 166
+ + +IF G L S+ C C VS+ + F+D+ +D+
Sbjct: 294 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 347
Query: 167 ---------KQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
T++T CLR F+ E L S K KC C SYQE+
Sbjct: 348 NVVNGESHMSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 392
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 237 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 278
>gi|380784219|gb|AFE63985.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|380784221|gb|AFE63986.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416981|gb|AFH31704.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|383416983|gb|AFH31705.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939714|gb|AFI33462.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
gi|384939716|gb|AFI33463.1| ubiquitin carboxyl-terminal hydrolase 22 [Macaca mulatta]
Length = 525
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 396 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 453
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 454 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 508
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 509 --------DSEGYLLFYHKQ 520
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 244 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 293
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ + +IF G L S+ C C VS+ + F+D+ +D
Sbjct: 294 N------CIIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 347
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 348 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 392
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 237 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 278
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D HS + T V +IF G
Sbjct: 195 QEDAHEFLRYTVDAMQKACL------NGSTKL--------DRHSQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KC+NC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ N+ LQ L + P + +L ++ +K E + + +I
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHE-HSKICHEQGFCMMCTMQAHITQALNNP 170
Query: 287 GS-IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
G+ I P I LR+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 GNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL 214
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 61/123 (49%), Gaps = 17/123 (13%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F + Q+DAHE+L F+++ + + L E KLS P+ ++ T +
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPE-------DKLSDPECP----------QDSTLIQ 195
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKC 193
++F G S+ +CL+C+ +SS E + D+ +DI S++Q L E L +N + C
Sbjct: 196 QLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGAAHSVSQALEQLVKPELLEGENAYHC 255
Query: 194 DNC 196
C
Sbjct: 256 SKC 258
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQ L + +P +L + ++T SC + + H +V
Sbjct: 81 GLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQT--SC---MLCTLQAHLTRV 135
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKL 334
P + + L F + Q+DAHE+L F+++ + + C+ KL
Sbjct: 136 -LCHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL 182
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 21/129 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K + + P +L L L+RF + +KM + V+ +P L + H + +Y
Sbjct: 266 KVLTLHTSPKVLILVLRRFSDLTGNKMTKEVR------YPERLDMQHCLSEQRAGLLVYV 319
Query: 385 LVAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L AV++H G + GHY VK+ + W DD V D + + HQ +
Sbjct: 320 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVT--------CALHQPA--- 368
Query: 444 GYILFYQSR 452
YILFY +
Sbjct: 369 -YILFYMQK 376
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
Query: 326 EKCMKVKKLPMILALHLKRFK----YMDKMNRHVKVSHRVVFPLELRL--FHLSDDAVNP 379
EK +K++K+P++ HLKRFK +++K+ +H++ FPLEL L + L
Sbjct: 335 EKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLE------FPLELDLKPYTLGGKDAEV 388
Query: 380 DRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFGLTSDHQ 438
+ Y L A+V H G GHY S V+S D W DD +V + + +
Sbjct: 389 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYV----------- 437
Query: 439 KSSETGYILFYQSRDST 455
S YIL Y+ + ++
Sbjct: 438 -LSREAYILLYKRKGTS 453
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
I L L S F Y Q+DAHEF+ ++ + ++SE G D S
Sbjct: 213 ITTLALDFSSFFWRYQQEDAHEFMQCFLDKLERCMVSE----------------GKDRVS 256
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSST 182
S E+ V+++F G L S C NC S E DL ++I+ S++ L F+
Sbjct: 257 S---EDDDLVNKVFGGRLISNLCCCNCGHCSETHEPLVDLSLEIENVDSLSSALESFTKV 313
Query: 183 ETLC-SDNKFKCDNC 196
E + + KFKC+NC
Sbjct: 314 ERIGDPETKFKCENC 328
>gi|431905359|gb|ELK10404.1| Ubiquitin carboxyl-terminal hydrolase 5 [Pteropus alecto]
Length = 848
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 102/249 (40%), Gaps = 44/249 (17%)
Query: 114 DGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-- 171
DG GG+NH+ + E + + G +T + V S DED L ++ ++ S
Sbjct: 258 DGSGGNNHAVEHYRETGYPLAVKLGTITPDGA-----DVYSYDEDDMVLDPNLAEHLSHF 312
Query: 172 ---ITQCLRGFSSTETLCSDNKFKCDNCASYQEAQGPNISALEKEIGPDRFPPNERYFGL 228
+ + + + L D + D QE+ P L+ GP Y G+
Sbjct: 313 GIDMLKMQKTDKTMTELEIDMNQRIDEWELIQESGVP----LKALFGPG-------YTGI 361
Query: 229 VNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKET-----LLSCLADLFHNIAT-- 281
N GN+CY NSV+Q L+ F+ + ++ K +N T + +A L H + +
Sbjct: 362 RNLGNSCYLNSVVQVLFSIPDFQRKYVDKLEKIFQNAPTDPTQDFSTQVAKLGHGLLSGE 421
Query: 282 ----------------HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
K+ IAP+ F + K EF QQDA EF LIN +
Sbjct: 422 YSKPAPESGDGEQLSEQKEVQDGIAPRMFKALIGKGHPEFSTNRQQDAQEFFLHLINMVE 481
Query: 326 EKCMKVKKL 334
KC+ +K+
Sbjct: 482 IKCLATEKV 490
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,590,125,657
Number of Sequences: 23463169
Number of extensions: 320698245
Number of successful extensions: 736329
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3284
Number of HSP's successfully gapped in prelim test: 4871
Number of HSP's that attempted gapping in prelim test: 703398
Number of HSP's gapped (non-prelim): 27912
length of query: 470
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 324
effective length of database: 8,933,572,693
effective search space: 2894477552532
effective search space used: 2894477552532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)