BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2130
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 243 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 302
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 303 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 362
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 363 LFYQSRD 369
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 141/231 (61%), Gaps = 33/231 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L P+G ++S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRL--PNGNIDSENNST--PDPTWVHEIFQGTLTNETRCLTCETI 191
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 242
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 107/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE+LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KESLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRLPNGNIDNENNNSTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CL+DLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+S+ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRIPNGNIDNENNNSAP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 222 bits (565), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLPMILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 196 bits (497), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/123 (74%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CL+DLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 140/231 (60%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTCK--------------EKEDRIEKSQP-- 43
G N SALEKEIGP++FP NE YFGLVN G TC ++ KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRK 76
Query: 44 -----------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLSDLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q ++ + +N+++ +PTWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADILQEERKQEKQNGRIPNGNIDNENNNNTP---DPTWVHEIFQGTLTNETRCLTCETI 192
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 193 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K MKVKKLP+ILALHLKRFKYMD+++R+ K+S+RVVFPLELRLF+ S DA NPDRMY+LV
Sbjct: 244 KRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLV 303
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTSD K+SE+GYI
Sbjct: 304 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGYI 363
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 364 LFYQSRD 370
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 141/232 (60%), Gaps = 34/232 (14%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------KEKEDRIEKSQP- 43
G N SALEKEIGP++FP NE YFGLVN G TC +EK KSQP
Sbjct: 17 GANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKV-LAYKSQPR 75
Query: 44 ------------FWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
F + + K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 76 KKENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLN 134
Query: 92 HINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
I +++ ER Q +L D DN+S+ +PTWVHEIFQG LT+ET+CL CET
Sbjct: 135 TIADILQEERKQEKQNGRLRNGDVDNEDNNSTP---DPTWVHEIFQGTLTNETRCLTCET 191
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 192 ISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 243
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/123 (75%), Positives = 106/123 (86%), Gaps = 1/123 (0%)
Query: 202 AQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
G N SALEKEIGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR++VL YK++
Sbjct: 15 TMGANASALEKEIGPEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQP 74
Query: 262 KKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLI 321
+K KE LL+CLADLFH+IAT KKKVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+
Sbjct: 75 RK-KENLLTCLADLFHSIATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLL 133
Query: 322 NHI 324
N I
Sbjct: 134 NTI 136
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 245 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 304
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 305 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 364
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 365 LFYQSRD 371
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 142/230 (61%), Gaps = 31/230 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q KL+ +G +++S TWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQDKQNGKLA--NGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETI 193
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 194 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 243
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 116/127 (91%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLV 386
K M+VKKLPMILALHLKRFKYM+++ R+ K+S+RVVFPLELRLF+ S DA NP+R+Y+LV
Sbjct: 246 KRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLV 305
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+HCGSGPNRGHYI+IVKSHDFWLLFDDD+V+KID IE+F+GLTS+ K+SE+GYI
Sbjct: 306 AVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSESGYI 365
Query: 447 LFYQSRD 453
LFYQSRD
Sbjct: 366 LFYQSRD 372
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/231 (48%), Positives = 141/231 (61%), Gaps = 30/231 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC------------KEKEDRI--EKSQPFW 45
G N SALEKEIG ++FP NE YFGLVN G TC + ++I +SQP
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 46 EQ---TSLQD----------KISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
++ T L D K+ + I L ++ FDNYMQQDAHEFLN+L+N
Sbjct: 77 KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRK-ENELFDNYMQQDAHEFLNYLLNT 135
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ ER Q +L A NH+S+ TWVHEIFQG LT+ET+CL CET+
Sbjct: 136 IADLLQEERKQDKTNGRL-ANGSLDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETI 194
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLRGFS+TETLCS+ K+ C+ C S QEA
Sbjct: 195 SSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 245
Score = 189 bits (479), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEKEIG ++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+++L Y+++ ++
Sbjct: 17 GANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFCRPFREKILAYRSQPRR 76
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IA K+KVG I PKKFITRLRKE + FDNYMQQDAHEFLN+L+N
Sbjct: 77 -KENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNT 135
Query: 324 I 324
I
Sbjct: 136 I 136
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 239 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDL 298
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 299 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 358
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 359 ILFYQSRE 366
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YKA+ KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 INEKCMKVKK 333
I + + KK
Sbjct: 132 IADILQEEKK 141
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 138/231 (59%), Gaps = 32/231 (13%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETV 152
I +++ E+ Q KL G + + + E TWVHEIFQG LT+ET+CLNCETV
Sbjct: 132 IADILQEEKKQEKQNGKLK---NGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETV 188
Query: 153 SSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
SSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 189 SSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQ 239
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/128 (75%), Positives = 117/128 (91%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M+VKKLPMILALHLKRFKYM++++R+ K+S+RVVFPLELRLF+ S DAVN DRMY+L
Sbjct: 243 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDL 302
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
VAVV+HCGSGPNRGHYI+IVKSH FWLLFDDD+V+KID IE+F+GLTSD K+SE+GY
Sbjct: 303 VAVVVHCGSGPNRGHYITIVKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESGY 362
Query: 446 ILFYQSRD 453
ILFYQSR+
Sbjct: 363 ILFYQSRE 370
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G N SALEK+IGP++FP NE YFGLVNFGNTCY NSVLQALYFC+PFR+ VL YK + KK
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKK 72
Query: 264 NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINH 323
KE LL+CLADLFH+IAT KKKVG I PKKFI+RLRKE D FDNYMQQDAHEFLN+L+N
Sbjct: 73 -KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNT 131
Query: 324 I 324
+
Sbjct: 132 V 132
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 136/232 (58%), Gaps = 30/232 (12%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--------------------------KE 33
G N SALEK+IGP++FP NE YFGLVN G TC K+
Sbjct: 13 GTNASALEKDIGPEQFPINEHYFGLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKK 72
Query: 34 KEDRIEKSQPFWEQTSLQDK-ISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINH 92
KE+ + + + Q K + + I L +D FDNYMQQDAHEFLN+L+N
Sbjct: 73 KENLLTCLADLFHSIATQKKKVGVIPPKKFISRLRK-ENDLFDNYMQQDAHEFLNYLLNT 131
Query: 93 INEVILSERPQSNAKSKLSAPDGG-GGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCET 151
+ +++ ER Q +L D +PTWVHEIFQG LT+ET+CLNCET
Sbjct: 132 VADILQEERKQEKQNGRLKNNGTAIATDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCET 191
Query: 152 VSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
VSSKDEDF DL VD++QNTSIT CLR FS+TETLCS+ K+ C+ C S QEAQ
Sbjct: 192 VSSKDEDFLDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQ 243
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 81/140 (57%), Positives = 113/140 (80%), Gaps = 12/140 (8%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K M++KK P +LALHLKRFK+++ +NRH K+S+RVVFPLELRLF++SDDA DRMY+L
Sbjct: 268 QKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVFPLELRLFNVSDDAEYGDRMYDL 327
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDH-------- 437
VA V+HCG+ PNRGHYI++VKS+ FWL+FDDD+V+K++ S++E+F G+++D
Sbjct: 328 VATVVHCGATPNRGHYITLVKSNSFWLVFDDDIVEKLEVSSMEEFSGMSTDANIQMPPGN 387
Query: 438 ----QKSSETGYILFYQSRD 453
QK+SE+ YILFYQ+RD
Sbjct: 388 QSAPQKNSESAYILFYQARD 407
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 102/130 (78%), Gaps = 5/130 (3%)
Query: 208 SALEKEIGPDRFP--PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKN- 264
S LEKEI NE Y+GLVNFGNTCY NSV+QAL+FC+PFR++VL YK KK+
Sbjct: 7 SQLEKEISTTESVNNANEHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSG 66
Query: 265 --KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
K+ L++CLADLFH+IA+ K++VG+IAPK+FIT+L+KE + FDNYMQQDAHEF N+LIN
Sbjct: 67 ASKDNLVTCLADLFHSIASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLIN 126
Query: 323 HINEKCMKVK 332
I+E ++ K
Sbjct: 127 TISETLIQEK 136
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 101/160 (63%), Gaps = 30/160 (18%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVIL----SERPQSNAKSKLS--------APDGGG---- 117
FDNYMQQDAHEF N+LIN I+E ++ +ER +++ L AP G
Sbjct: 109 FDNYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRS 168
Query: 118 ---GDNHSSSGF-----------EEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQ 163
G + + G + TW+HEIFQGILT+ET+CL+CETVSSKDEDF DL
Sbjct: 169 DEKGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLS 228
Query: 164 VDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEAQ 203
+D++QNTSI+ CLR FS TETLC D K+ C+ C+S QEAQ
Sbjct: 229 IDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQ 268
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 95/124 (76%), Gaps = 2/124 (1%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LE+ A NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 264 N-KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN 322
+ +E LL+CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 323 HINE 326
+ E
Sbjct: 121 ELVE 124
Score = 147 bits (372), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 97/126 (76%), Gaps = 2/126 (1%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K MK+KK P IL +HLKRFKYM+++ R+ K+S+RVVFPLEL+L + D+ V D Y+L
Sbjct: 238 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYV--DIEYSL 295
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGY 445
AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++ GY
Sbjct: 296 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGY 355
Query: 446 ILFYQS 451
IL Y+S
Sbjct: 356 ILLYES 361
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 129/245 (52%), Gaps = 50/245 (20%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC---------------------------- 31
G S LEK +G D+FP ERYFG N G TC
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 32 KEKEDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLIN 91
+E+ + + Q S Q K + ++ ++ F +YM QDAHEFLN+L+N
Sbjct: 61 DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLN 120
Query: 92 HINEVILSERPQSNAKSK-----------LSAPDGGGGDNHSSSGFEEP--TWVHEIFQG 138
+ E++ E + A ++ L AP G +EP TWVH+IFQG
Sbjct: 121 ELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVH-------KEPIVTWVHKIFQG 173
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCAS 198
ILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD C S
Sbjct: 174 ILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCS 233
Query: 199 YQEAQ 203
QEAQ
Sbjct: 234 LQEAQ 238
>sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana
GN=UBP3 PE=1 SV=1
Length = 371
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 204 GPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKK 263
G S LEK +G D+FP ERYFG NFGNTCY NSVLQALYFC PFR+++LEY NK
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 264 ---NKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
+E L++CLADLF I++ KKK G IAPK+F+ RL+K+ + F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 321 INHI 324
+N +
Sbjct: 121 LNEV 124
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 98/132 (74%), Gaps = 6/132 (4%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNP--DRMY 383
+K MK+KK P IL +HLKRFKY++++ R+ K+S+RVVFPLEL+L + V P D Y
Sbjct: 243 QKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL----SNTVEPYADVEY 298
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
+L AVV+H GSGPN GHY+S+VKSH+ WL FDD+ V+ I++S ++ FFG + ++ +++
Sbjct: 299 SLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDH 358
Query: 444 GYILFYQSRDST 455
GYILFY+S T
Sbjct: 359 GYILFYESLGPT 370
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 128/249 (51%), Gaps = 53/249 (21%)
Query: 1 GPNISALEKEIGPDRFPPNERYFGLVN-GKTC--KEKEDRIEKSQPFWEQT----SLQDK 53
G S LEK +G D+FP ERYFG N G TC + PF EQ +
Sbjct: 2 GAAGSKLEKALG-DQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 54 ISLGWECSLILELDLCS------------------------SDEFDNYMQQDAHEFLNFL 89
++ E + DL S ++ F +YM QDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 90 INHINEVILSERPQSNAKSK-------------LSAPDGGGGDNHSSSGFEEP--TWVHE 134
+N + +++ E + + + L P G + +EP TWVH
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVH------KEPIVTWVHN 174
Query: 135 IFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCD 194
IFQGILT+ET+CL CETV+++DE F DL +DI+QN+SIT CL+ FSSTETL +++KF CD
Sbjct: 175 IFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCD 234
Query: 195 NCASYQEAQ 203
C S QEAQ
Sbjct: 235 KCCSLQEAQ 243
>sp|Q96V54|CREB_EMENI Ubiquitin carboxyl-terminal hydrolase creB OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=creB PE=1 SV=1
Length = 766
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 343 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 402
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 403 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 458
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 459 YVLFYQ 464
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 13/138 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F M QDAHEFLN L+N + +++ S +P S+ + G +++
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVVDVEKAAAKLLESPQPASDVSDSVIPSSSSGSRTPNTT- 269
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETL 185
WVHE+F+G+LTSET+CL CE S +DE F DL VD++Q++S+T CLR FS+ E L
Sbjct: 270 ----RWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEML 325
Query: 186 CSDNKFKCDNCASYQEAQ 203
C NKF CDNC QEA+
Sbjct: 326 CERNKFHCDNCGGLQEAE 343
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q ++ LEK E+GP R +++++G+ NFGNTCY NS+LQ LY+ PFR+ VL
Sbjct: 26 KEPQPLPMTPLEKMLTELGPIRGDGSDKFYGMENFGNTCYCNSILQCLYYSVPFREAVLN 85
Query: 257 YKAKN 261
Y +
Sbjct: 86 YPKRT 90
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L S L D+F +I + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFSSLKDMFESIVGSQSRIGIIRPQHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEV 230
>sp|A2Q9N1|CREB_ASPNC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=creB PE=3 SV=2
Length = 758
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY+SI+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT--- 130
F + M QDAHEFLN ++N + + +E + S A SSG + P
Sbjct: 213 FRSAMHQDAHEFLNLVLNEVVANVEAEAMKQPIPSLPPADTTDSSRQSISSGSKTPNTTR 272
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC NK
Sbjct: 273 WVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQHSSVTSCLRKFSAEEMLCERNK 332
Query: 191 FKCDNCASYQEAQ 203
F CDNC QEA+
Sbjct: 333 FHCDNCGGLQEAE 345
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P+ F+ LR+E + F + M QDAHEFLN ++N +
Sbjct: 174 ESLFTSLKDIFESVVASQSRIGIVRPQHFLDVLRRENEMFRSAMHQDAHEFLNLVLNEV 232
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 207 ISALEK---EIGPD--RFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
I+ LEK E+G D R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ VL Y +
Sbjct: 33 ITPLEKMLQEMGSDSVRQDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVLNYPTRT 92
Query: 262 KKNKETLLSCLA 273
E+L + LA
Sbjct: 93 P--IESLEAALA 102
>sp|Q0CT11|CREB_ASPTN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=creB PE=3 SV=2
Length = 768
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSER-PQSNAKSKLSAPDGGGGDNHS-SSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + + L + HS SSG + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEALKQPSLERSLPPAESSESVEHSGSSGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G + P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDLFESVVGSQSRIGIVRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 212 KEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSC 271
+++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+ Y + E+L +
Sbjct: 41 QDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRTP--IESLTAA 98
Query: 272 LADLF 276
LA+
Sbjct: 99 LAETL 103
>sp|Q4WQI1|CREB_ASPFU Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=creB PE=3 SV=3
Length = 775
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERP-QSNAKSKLSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + L AP+ D SS+G + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 85
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 86 YPTRTP--IESLEAALA 100
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
>sp|B0Y4P5|CREB_ASPFC Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=creB PE=3 SV=1
Length = 767
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 339 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 398
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 399 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 454
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 455 YVLFYQ 460
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSE-RPQSNAKSKLSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E Q + L AP+ D SS+G + P
Sbjct: 205 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPPIEKSLPAPETADSVDQSSSTGSKTPNT 264
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 265 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 324
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 325 NKFHCDNCGGLQEAE 339
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 20 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 79
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 80 YPTRTP--IESLEAALA 94
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 166 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 224
>sp|A1CW53|CREB_NEOFI Probable ubiquitin carboxyl-terminal hydrolase creB OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=creB PE=3 SV=2
Length = 761
Score = 145 bits (367), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ +++FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDEMVEPVDKNYVKNFFG----DKPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSK-LSAPDGGGG-DNHSSSGFEEPT- 130
F M QDAHEFLN L+N + + +E + K L AP+ D SS+G + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEASKQPLMEKSLPAPETADSVDQSSSTGSKTPNT 270
Query: 131 --WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSD 188
WVHE+F+G+LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 271 TRWVHELFEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCER 330
Query: 189 NKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 331 NKFHCDNCGGLQEAE 345
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E Q P ++ LEK ++GP R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPQPPPMTPLEKRLLDMGPIREDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVIN 85
Query: 257 YKAKNKKNKETLLSCLA 273
Y + E+L + LA
Sbjct: 86 YPTRTP--IESLEAALA 100
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G I P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIIRPQQFLEVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
>sp|Q2UUG8|CREB_ASPOR Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=creB PE=3 SV=2
Length = 754
Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 344 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 403
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 404 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 459
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 460 YVLFYQ 465
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN---HSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + + S P D+ SSG + P
Sbjct: 210 FRTAMHQDAHEFLNLLLNEVVANVEAEA-SKQPEPERSLPPAESADSTELSGSSGSKTPN 268
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 269 TTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 328
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 329 RNKFHCDNCGGLQEAE 344
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 171 ESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 229
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK ++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 25 KEPPVPPVTPLEKMLQDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVVN 84
Query: 257 YKAKNKKNKETLLSCLADLF 276
Y + E+L + LA+
Sbjct: 85 YPTRTP--IESLEAALANTL 102
>sp|B8NSV5|CREB_ASPFN Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 /
JCM 12722 / SRRC 167) GN=creB PE=3 SV=1
Length = 755
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 345 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 404
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 405 YAVVVHIGGGPYHGHYVAIIKTQDRGWLLFDDEMVEPVDKNYVRNFFG----DRPGLACA 460
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 461 YVLFYQ 466
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 7/136 (5%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDN---HSSSGFEEPT 130
F M QDAHEFLN L+N + + +E + + S P D+ SSG + P
Sbjct: 211 FRTAMHQDAHEFLNLLLNEVVANVEAEA-SKQPEPERSLPPAESADSTELSGSSGSKTPN 269
Query: 131 ---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCS 187
WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CLR FS+ E LC
Sbjct: 270 TTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQHSSVTSCLRKFSAEEMLCE 329
Query: 188 DNKFKCDNCASYQEAQ 203
NKF CDNC QEA+
Sbjct: 330 RNKFHCDNCGGLQEAE 345
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L DLF ++ + ++G I P+ F+ LR+E + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDLFESVVASQSRIGIIRPQHFLDVLRREHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 200 QEAQGPNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLE 256
+E P ++ LEK ++G R ++++FG+ N+GNTCY NS+LQ LY+ PFR+ V+
Sbjct: 26 KEPPVPPVTPLEKMLQDMGAIREDGSDKFFGMENYGNTCYCNSILQCLYYSVPFREAVVN 85
Query: 257 YKAKNKKNKETLLSCLADLF 276
Y + E+L + LA+
Sbjct: 86 YPTRTP--IESLEAALANTL 103
>sp|A1CIL1|CREB_ASPCL Probable ubiquitin carboxyl-terminal hydrolase creB OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=creB PE=3 SV=2
Length = 760
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 91/126 (72%), Gaps = 5/126 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+K+LP ILALHLKRFKY + + R K+ HRVV+P LRLF+ +DDA +PDR+Y L
Sbjct: 346 EKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYEL 405
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
AVV+H G GP GHY++I+K+ D WLLFDD++V+ +D++ + +FFG +
Sbjct: 406 YAVVVHIGGGPYHGHYVAIIKTEDRGWLLFDDELVEPVDKNYVRNFFG----DKPGLACA 461
Query: 445 YILFYQ 450
Y+LFYQ
Sbjct: 462 YVLFYQ 467
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/147 (50%), Positives = 93/147 (63%), Gaps = 10/147 (6%)
Query: 66 LDLCSSDE--FDNYMQQDAHEFLNFLINHIN---EVILSERPQSNAKSKLSAPDGGGG-D 119
LD+ D F M QDAHEFLN L+N + E S++P + KS L APD D
Sbjct: 201 LDVLRRDHEMFRTAMHQDAHEFLNLLLNEVVANVEAEASKQPAAIEKS-LPAPDHAETVD 259
Query: 120 NHSSSGFEEPT---WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCL 176
+SSG + P WVHE+F+G LTSET+CL CE VS +DE F DL VD++Q++S+T CL
Sbjct: 260 QSASSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQHSSVTSCL 319
Query: 177 RGFSSTETLCSDNKFKCDNCASYQEAQ 203
R FS+ E LC NKF CDNC QEA+
Sbjct: 320 RKFSAEEMLCERNKFHCDNCGGLQEAE 346
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 266 ETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
E+L + L D+F ++ + ++G + P++F+ LR++ + F M QDAHEFLN L+N +
Sbjct: 172 ESLFTSLKDIFESVVGSQSRIGIVRPQQFLDVLRRDHEMFRTAMHQDAHEFLNLLLNEV 230
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 205 PNISALEK---EIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN 261
P ++ LEK ++G R +++++G+ N+GNTCY NS+LQ LY+ PFR+ V+ Y +
Sbjct: 31 PPMTPLEKRLLDMGSIRGDGSDKFYGMENYGNTCYCNSILQCLYYSVPFREAVINYPTRT 90
Query: 262 KKNKETLLSCLA 273
E+L + LA
Sbjct: 91 P--IESLEAALA 100
>sp|Q9P7V9|UBP9_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 9
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp9 PE=1 SV=1
Length = 585
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
EK MK+KKLP IL+LHLKRFKY + H K+ + +VF E+RLF ++DA N +RMY L
Sbjct: 301 EKRMKIKKLPKILSLHLKRFKYNETQEGHDKLFYTIVFTNEMRLFTTTEDAENAERMYYL 360
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V++H G GP+RGHY+SIV++ + W+LFDD+ V ++++ ++ FFG Q T
Sbjct: 361 SSVIVHVGGGPHRGHYVSIVRTKTYGWVLFDDENVTPVNENYLQRFFG----DQPGQATA 416
Query: 445 YILFYQSRDSTD 456
Y+LFY + D D
Sbjct: 417 YVLFYTAADEED 428
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 80/132 (60%), Gaps = 19/132 (14%)
Query: 72 DEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTW 131
+ F + QQDAHEF NFL+N + E + D G NHS P W
Sbjct: 189 EAFRSTQQQDAHEFFNFLLNSVTETL----------------DEYYG-NHS--DVMHPKW 229
Query: 132 VHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKF 191
VH +F+G LTSETKCL CE ++S+DE F DL +DI+ +TS+T CLR FS++E L S NKF
Sbjct: 230 VHSLFEGTLTSETKCLTCENITSRDESFLDLSIDIENHTSVTSCLRSFSASEMLSSKNKF 289
Query: 192 KCDNCASYQEAQ 203
CD C S QEA+
Sbjct: 290 HCDVCKSLQEAE 301
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 265 KETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHI 324
KE + +CL DL+ +++ + G +P++FI LR++ + F + QQDAHEF NFL+N +
Sbjct: 151 KENIYTCLKDLYCSVSCCDCRYGICSPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSV 210
Query: 325 NE 326
E
Sbjct: 211 TE 212
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 194 DNCASYQEAQGPNISALEKEIGPDRFPPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDR 253
D S EA+ P S I P+ +R++GL N+GNTCY +SVL +LY KPFRD
Sbjct: 16 DRRKSTWEAELPKPS-----IRPETL--TDRFYGLTNYGNTCYVSSVLVSLYHLKPFRDS 68
Query: 254 VLEY 257
+ Y
Sbjct: 69 LNSY 72
>sp|P39967|UBP9_YEAST Ubiquitin carboxyl-terminal hydrolase 9 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP9 PE=1 SV=1
Length = 754
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 7/139 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP IL+LHLKRFKY ++ ++K+ +++++PL L + + +V + Y L
Sbjct: 546 ERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVY--KKYEL 603
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
VVIH GSGP GHY+ I ++ F WLL+DD+ V+ I + T+ F G H T
Sbjct: 604 SGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTG----HPGDQTTA 659
Query: 445 YILFYQSRDSTDARTMNSN 463
Y+LFY+ + N N
Sbjct: 660 YVLFYKETQADKTENQNEN 678
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 15/132 (11%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ MQQDAHEFLNFL+N +E I P+ G ++S+ F +
Sbjct: 428 FNTMMQQDAHEFLNFLLNDFSEYIQRNNPRMRF--------GPQKTDNSNDNF-----IT 474
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++F+G LT+ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 475 DLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKF 534
Query: 192 KCDNCASYQEAQ 203
C+ C QEA+
Sbjct: 535 YCNKCYGLQEAE 546
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 267 TLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINE 326
TL + L D+F +I + G ++P +F+ L+KE F+ MQQDAHEFLNFL+N +E
Sbjct: 390 TLYNGLKDIFESITENLSLTGIVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSE 449
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 22/34 (64%)
Query: 224 RYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEY 257
+ FG NFGNTCY NSVLQ LY FR VL Y
Sbjct: 132 KVFGYENFGNTCYCNSVLQCLYNIPEFRCNVLRY 165
>sp|P38187|UBP13_YEAST Ubiquitin carboxyl-terminal hydrolase 13 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP13 PE=1
SV=3
Length = 747
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
E+ + +K+LP L LHLKRFKY +K N ++K+ + + +PL L + + V + Y L
Sbjct: 547 ERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYPLTLNVCSSINSKVC--QKYEL 604
Query: 386 VAVVIHCGSGPNRGHYISIVKSHDF-WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+H G GP GHY+S+ K F WLLFDD+ V+ + + T+ +F G + + T
Sbjct: 605 AGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMA----TA 660
Query: 445 YILFYQS 451
Y+LFY++
Sbjct: 661 YVLFYKA 667
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
F+ M QDAHEF NFL+N ++E I E K++A D N S + ++
Sbjct: 426 FNTTMHQDAHEFFNFLLNELSEYIEREN------KKIAASD----INSDSEPSKSKNFIS 475
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIK--QNTSITQCLRGFSSTETLCSDNKF 191
++FQG LT++ KCL C+ ++S+DE F D ++++ + T I + L+ + E L NKF
Sbjct: 476 DLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKF 535
Query: 192 KCDNCASYQEAQ 203
CD C QEA+
Sbjct: 536 YCDECCGLQEAE 547
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 261 NKKNKETLLSCLADLFHNIATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFL 320
N +K TL S L D+F I + G ++P F+ L++E F+ M QDAHEF NFL
Sbjct: 382 NGSDKATLYSSLRDIFECITENTYLTGVVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFL 441
Query: 321 INHINE 326
+N ++E
Sbjct: 442 LNELSE 447
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 202 AQGPNISALEKEIGPDRFP---PNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYK 258
QGP L ++ D P + + FG NFGNTCY NSVLQ LY R+ +L++
Sbjct: 114 TQGPEAPILAMKVS-DSMPYGDGSNKVFGYENFGNTCYCNSVLQCLYNLSSLRENILQFP 172
Query: 259 AKNKKNKE 266
K++++ +
Sbjct: 173 KKSRESDQ 180
>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
PE=1 SV=1
Length = 526
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPT 130
+ F + Q+DAHEFL F + ++E L QS S+ S+P
Sbjct: 123 TSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP----------------- 165
Query: 131 WVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNK 190
+H+IF G S+ KCL C+ S + F D+ +DI S+ Q L +E LC DN
Sbjct: 166 -IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNA 224
Query: 191 FKCDNC 196
+ C C
Sbjct: 225 YYCGKC 230
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+CY N+ LQ L P D +L E+ + L + L H
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKLCAMEALVTQSLLHSH 111
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKK 333
+ P +T F + Q+DAHEFL F + ++E C++V +
Sbjct: 112 SGDVMKPSHILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVHR 154
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYM--DKMNRHVKVSHRVVFP--LELRLFHLSDDAVNPDRM 382
K + V P +L + L RF +K++R +V +P L+L+ + LS+ P
Sbjct: 238 KTLHVHIAPKVLMVVLNRFSAFTGNKLDR------KVSYPEFLDLKPY-LSEPTGGP-LP 289
Query: 383 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
Y L AV++H G+ + GHY VK+ H W DD V + D +++ +
Sbjct: 290 YALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLN------------ 337
Query: 442 ETGYILFYQSRDSTDARTMNSNDCRVN 468
E Y+LFY + + +++ + R+N
Sbjct: 338 ENAYVLFYVQQANLKQVSIDMPEGRIN 364
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHE + F I+ + V L E GG+ +E T + IF G
Sbjct: 257 QEDAHELMRFAIDMMQSVCLDEF---------------GGEKVVPPRAQETTLIQYIFGG 301
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V+I + S+ +CL F++ E L DN +KCD C
Sbjct: 302 LLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 198 SYQEA 202
Y +A
Sbjct: 362 DYVKA 366
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 5/105 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE--YKAKNKKNKETLLSCLADLFHNIATHKK 284
GL N GN+C++N VLQ L + +P +LE +K + ++N L C + + A + +
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFL-CEFENHLDRANYSR 233
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHE + F I+ + C+
Sbjct: 234 --FPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCL 276
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEF+ + I+ + V L E GG+ +E T + IF G
Sbjct: 251 QEDAHEFMRYAIDMMQSVCLDEF---------------GGEKIVPPRSQETTLIQYIFGG 295
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNT-SITQCLRGFSSTETLCSDNKFKCDNCA 197
+L S+ +C C VS + E+ DL V++ + S+ +CL F++ E L DN +KCD C+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCS 355
Query: 198 SYQEA-------QGPNI 207
Y +A + PNI
Sbjct: 356 DYVKACKRLTIRRAPNI 372
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL+N GN+C++N +LQ L + +P +LE K ++ L + ++ +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLE-KGHKRECMRNDWCFLCEFQTHVERASQSR 227
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
+P I+RL Q+DAHEF+ + I+ + C+
Sbjct: 228 FPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCL 270
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 26/135 (19%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNLVAV 388
+ +++ P IL + LKR++ R+ K++ R+ FP L L + + +Y L AV
Sbjct: 364 LTIRRAPNILTIALKRYQ----GGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAV 419
Query: 389 VIHCG--SGPNRGHYISIVKSHDF---WLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
++H + GHYI +K DF W DD ++ ++ +ED S+
Sbjct: 420 IVHLDMLNASFFGHYICYIK--DFCGNWYRIDDSEIESVE---LEDVL---------SQR 465
Query: 444 GYILFY---QSRDST 455
Y+L Y Q+R S+
Sbjct: 466 AYMLLYSRIQARSSS 480
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 60/128 (46%), Gaps = 18/128 (14%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP L LHLKRF + + KV V FPL +++ + L + PD +Y+L
Sbjct: 400 IQKLPKALCLHLKRFHWTAYLRN--KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYAVHEGRWFHFNDSTVTVTDEETV------------GKAKAYI 505
Query: 447 LFYQSRDS 454
LFY R +
Sbjct: 506 LFYVERQA 513
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>sp|B2RQC2|UBP42_MOUSE Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus GN=Usp42
PE=2 SV=1
Length = 1324
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L + LKRF K++ V +P L++R + +
Sbjct: 289 KCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 343
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D + +
Sbjct: 344 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLN-- 400
Query: 432 GLTSDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 401 ----------QQAYVLFY 408
>sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus
GN=Usp42 PE=3 SV=1
Length = 1325
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 194 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 235
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+T+ L F E L +N +KC C
Sbjct: 236 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 293
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 46/103 (44%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L ++ + E H
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 171 DVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 213
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L + LKRF K++ V +P L++R + +
Sbjct: 289 KCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 343
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++ +
Sbjct: 344 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLN-- 400
Query: 432 GLTSDHQKSSETGYILFY 449
+ Y+LFY
Sbjct: 401 ----------QQAYVLFY 408
>sp|Q9SB51|UBP16_ARATH Ubiquitin carboxyl-terminal hydrolase 16 OS=Arabidopsis thaliana
GN=UBP16 PE=2 SV=1
Length = 1008
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 74 FDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVH 133
N ++DAHEFL F+++ + V + D SS E+ T +
Sbjct: 620 LGNGKEEDAHEFLRFVVDTMQSVCIKASEY---------------DMTKSSKLEDTTLIG 664
Query: 134 EIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQNTS-ITQCLRGFSSTETLCSDNKFK 192
F G L S+ KC+ C+ S E DL V+I + S + LR F+ TE L +NK++
Sbjct: 665 LTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALRRFTRTEILDGENKYR 724
Query: 193 CDNCASYQEAQ 203
C +C SY+ A+
Sbjct: 725 CGSCKSYERAK 735
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 3/111 (2%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAKNKKNKETLLSCLADLFHNIATHKKK 285
GL+N GN+C++N V Q L F P L+ + ++ KE +C + + K++
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRACTKKEQCFTCGFEKL--VVKAKEE 600
Query: 286 VGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPM 336
++P +++L+ N ++DAHEFL F+++ + C+K + M
Sbjct: 601 KSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDM 651
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 20/136 (14%)
Query: 326 EKCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYNL 385
+K +K+ + P +L + LKRF+ + K++ + FP L L Y L
Sbjct: 735 KKKLKITEPPNVLTIALKRFQ----AGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKL 790
Query: 386 VAVVIHCG--SGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
V++H + GHY+ +++ + W DD V +TSD ++
Sbjct: 791 YGVIVHLDVMNAAFSGHYVCYIRNQNKWYKADDSTV-------------VTSDVERILTK 837
Query: 444 G-YILFYQSRDSTDAR 458
G Y+LFY T R
Sbjct: 838 GAYMLFYARCTPTPPR 853
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 21/133 (15%)
Query: 331 VKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL---ELRLFHLSDDAVNPDR-MYNLV 386
++KLP +L LHLKRF + + KV V FPL +++ + L + P+ +Y+L
Sbjct: 400 IQKLPKVLCLHLKRFHWTAYLRN--KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLA 457
Query: 387 AVVIHCGSGPNRGHYISIVKSHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYI 446
AVV+H GSG GHY + W F+D V D+ T+ YI
Sbjct: 458 AVVVHHGSGVGSGHYTAYATHEGRWFHFNDSTVTLTDEETV------------VKAKAYI 505
Query: 447 LFY---QSRDSTD 456
LFY Q++ +D
Sbjct: 506 LFYVEHQAKAGSD 518
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 61/142 (42%), Gaps = 31/142 (21%)
Query: 74 FDNYMQQDAHEFLNFLINHI--------NEVILSERPQSNAKSKLSAPDGGGGDNHSSSG 125
F Y QQDAHEF+ +L++H+ N V S Q N S LSA + + S
Sbjct: 253 FRGYQQQDAHEFMRYLLDHLHLELQGGFNGVSRSAILQEN--STLSASNKCCINGAS--- 307
Query: 126 FEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDIKQN--------------TS 171
T V IF GIL +E CL C T S K + F DL +DI S
Sbjct: 308 ----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 172 ITQCLRGFSSTETLCSDNKFKC 193
+ CLR F+ E L + C
Sbjct: 364 LRDCLRSFTDLEELDETELYMC 385
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 227 GLVNFGNTCYSNSVLQAL----YFCKPFRDR-VLEYKAKNKKNKETLLS--------CLA 273
GL N GNTC+ N++LQ+L FC F++ +E + + T + L
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLV 219
Query: 274 DLFHNI--ATHKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHIN 325
+ F A + + +P+ + K F Y QQDAHEF+ +L++H++
Sbjct: 220 EEFRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLH 273
>sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42
PE=1 SV=3
Length = 1324
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.3 bits (90), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-VYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>sp|E1B9W9|UBP42_BOVIN Ubiquitin carboxyl-terminal hydrolase 42 OS=Bos taurus GN=USP42
PE=3 SV=1
Length = 1333
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 79 QQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQG 138
Q+DAHEFL + ++ + + L N +KL D H+ + T V +IF G
Sbjct: 195 QEDAHEFLQYTVDAMQKACL------NGSNKL--------DRHTQAT----TLVCQIFGG 236
Query: 139 ILTSETKCLNCETVSSKDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNC 196
L S KCLNC+ VS + + D+ ++IK S+ + L F E L +N +KC C
Sbjct: 237 YLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKC 294
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC++N+ LQ L + P + +L + E +C A+ F + T + +
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSH--------EHSKTCHAEGFCMMCTMQAHI 163
Query: 287 GS--------IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCM 329
I P I +R+ F Q+DAHEFL + ++ + + C+
Sbjct: 164 TQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214
Score = 39.7 bits (91), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 33/138 (23%)
Query: 327 KCMKVKKL-PM-----------ILALHLKRFKYMDKMNRHVKVSHRVVFP--LELRLFHL 372
KC K KK+ P +L L LKRF K++ V +P L++R + +
Sbjct: 290 KCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGG----KIAKDVKYPEYLDIRPY-M 344
Query: 373 SDDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFF 431
S P +Y L AV++H G + GHY +K S+ W +D +V D ++
Sbjct: 345 SQPNGEPI-IYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSV---- 399
Query: 432 GLTSDHQKSSETGYILFY 449
S+ Y+LFY
Sbjct: 400 --------LSQQAYVLFY 409
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ +P +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRGLNMSEFVCDPSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L + Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLACEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAKSKLSAPDG----GGGDNHSSS 124
+ +F Y QQD+ E L FL++ ++E + + ++P K PD +NH
Sbjct: 383 APQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHR-- 440
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
+ + + F G+ S C C VS + F L + +
Sbjct: 441 -LRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAKSKLSAPD----GGGGDNHSSS 124
+ +F Y QQD+ E L FL++ ++E + + ++P K PD +NH
Sbjct: 383 APQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDVVVAKEAWENHR-- 440
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
+ + + F G+ S C C VS + F L + +
Sbjct: 441 -LRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P D L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L FL++ ++E +VKK P +
Sbjct: 363 WSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYL 418
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDR---MYNLVAVVI 390
LP IL +HLKRF Y NR+ + V +R ++S+ N +Y+L+AV
Sbjct: 817 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSN 872
Query: 391 HCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYILF 448
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+LF
Sbjct: 873 HYGAM-GVGHYTAYAKNKLNGKWYYFDDSNV------------SLASEDQIVTKAAYVLF 919
Query: 449 YQSRD 453
YQ RD
Sbjct: 920 YQRRD 924
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAKSKLSAPDG----GGGDNHSSS 124
+ +F Y QQD+ E L FL++ ++E + + ++P K PD +NH
Sbjct: 383 APQFSGYQQQDSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDAVVAKEAWENHR-- 440
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
+ + + F G+ S C C VS + F L + +
Sbjct: 441 -LRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana
GN=UBP25 PE=2 SV=1
Length = 661
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 35 EDRIEKSQPFWEQTSLQDKISLGWECSLILELDLCSSDEFDNYMQQDAHEFLNFLINHIN 94
E RI +S T +KIS C I ++ F Q+DAHEFL ++I+ +
Sbjct: 79 EKRIARSLSVDLTTDAPNKIS---SCLKIF------AEHFKLGRQEDAHEFLRYVIDACH 129
Query: 95 EVILSERPQSNAKSKLSAPDGGGGDNHSSSGFEEPTWVHEIFQGILTSETKCLNCETVSS 154
L +L G + F + V EIF G L S+ KCL+C S+
Sbjct: 130 NTSL----------RLKKLRYNGNEP-----FNGNSVVKEIFGGALQSQVKCLSCGAESN 174
Query: 155 KDEDFFDLQVDIKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA-------QGPNI 207
K ++ D+ ++I Q++S+ + L+ F +E L +NK++C++C A Q PNI
Sbjct: 175 KADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNI 234
Query: 208 SALE 211
++
Sbjct: 235 LVIQ 238
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 220 PPNERYFGLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK-------NKKNKETLLSCL 272
PP GL N GNTCY NSVLQ L F P + L +K + + K C+
Sbjct: 22 PP----LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCI 77
Query: 273 ADLFHNIA-THKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKV 331
+ IA + + + AP K + L+ + F Q+DAHEFL ++I+ + +++
Sbjct: 78 VE--KRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRL 135
Query: 332 KKL 334
KKL
Sbjct: 136 KKL 138
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 20/134 (14%)
Query: 327 KCMKVKKLPMILALHLKRFK--YMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPDRMYN 384
K M + + P IL + LKRF + K+++ + +V L F +S + +P Y
Sbjct: 224 KQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILV----LSNF-MSKASKDPQPEYK 278
Query: 385 LVAVVIHCGSGPNRGHYISIVK-SHDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
L +++H G P GHY + VK S W +D F L++ + SE
Sbjct: 279 LFGIIVHSGFSPESGHYYAYVKDSLGRWYCCND------------SFVSLSTLQEVLSEK 326
Query: 444 GYILFYQSRDSTDA 457
YILF+ + A
Sbjct: 327 AYILFFSRSNQRPA 340
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLE-YKAK-NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS LQ L P + L+ Y++ N KN + LA F +
Sbjct: 302 GLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLW 361
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMILA 339
G ++AP+ F T+L + +F Y Q D+ E L FL++ ++E KVK+ P I A
Sbjct: 362 SSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNKVKRKPYIEA 418
Score = 41.2 bits (95), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 23/138 (16%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLSDDAVNPD---RMY 383
K + + KLP IL HLKRF Y +R+ K + + LS N D +Y
Sbjct: 767 KKLDLWKLPDILVFHLKRFTY----SRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLY 822
Query: 384 NLVAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
L A+ H G GHY + K D W FDD V +++S I+ +
Sbjct: 823 ELYAISNHYGGL-GGGHYTAYAKLMDETKWYNFDDSRVSAVNESEIK------------T 869
Query: 442 ETGYILFYQSRDSTDART 459
Y+LFYQ R +D+ T
Sbjct: 870 SAAYVLFYQ-RVKSDSET 886
>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
PE=1 SV=2
Length = 909
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 571 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 627
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 628 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 684
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M++++ P
Sbjct: 211 -KSRPGSVVPANLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEMEEEPQT 269
Query: 338 LA 339
L
Sbjct: 270 LT 271
>sp|Q5REG5|UBP33_PONAB Ubiquitin carboxyl-terminal hydrolase 33 OS=Pongo abelii GN=USP33
PE=2 SV=1
Length = 914
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 572 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPAQIVTYDLL 628
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 629 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 685
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
K + GS+ P ++ F Y QQDA EFL L++ ++E+
Sbjct: 211 -KSRPGSVVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE 255
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 385 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 442
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K + + D
Sbjct: 443 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITKASIADVLD--- 498
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 499 ---------SEGYLLFYHKQ 509
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 233 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 282
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 283 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSES 336
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 337 SVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 381
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 166 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 225
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 226 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 267
>sp|A6QNM7|UBP33_BOVIN Ubiquitin carboxyl-terminal hydrolase 33 OS=Bos taurus GN=USP33
PE=2 SV=1
Length = 912
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 71/118 (60%), Gaps = 9/118 (7%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+S V FPLE L+ F L+ D+ Y+L+
Sbjct: 574 KVQKFPEILCIHLKRFRH--ELMFSTKISTHVSFPLEGLDLQPF-LAKDSPVQIVTYDLL 630
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSE 442
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ +ST+++ ++KSSE
Sbjct: 631 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSE 687
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKE-----TLLSCLADLFHNIAT 281
GL N GNTCY N+ LQAL C P L+ + +K+ + L + +L+H
Sbjct: 155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDKKPAICKSYLKLMTELWH---- 210
Query: 282 HKKKVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLIN----HINEKCMKVKKLPMI 337
K + GS+ P ++ F Y QQDA EFL L++ + E+ M+V++ P
Sbjct: 211 -KSRPGSVVPTTLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEELKEQVMEVEEDPQT 269
Query: 338 L 338
+
Sbjct: 270 I 270
>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
PE=1 SV=2
Length = 525
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 329 MKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRL---------------FHLS 373
+ +KKLP++ HLKRF++ K+ R K++ V FPLEL + +
Sbjct: 396 LTMKKLPIVACFHLKRFEHSAKLRR--KITTYVSFPLELDMTPFMASSKESRMNGQYQQP 453
Query: 374 DDAVNPDRMYNLVAVVIHCGSGPNRGHYISIVKSH-DFWLLFDDDVVDKIDQSTIEDFFG 432
D++N D Y+L AVV H G+ GHY S ++ H D W DD ++ K ++I+D
Sbjct: 454 TDSLNNDNKYSLFAVVNHQGT-LESGHYTSFIRQHKDQWFKCDDAIITK---ASIKDVL- 508
Query: 433 LTSDHQKSSETGYILFYQSR 452
GY+LFY +
Sbjct: 509 --------DSEGYLLFYHKQ 520
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 68/165 (41%), Gaps = 41/165 (24%)
Query: 63 ILELDLCSSDEFDNYMQQDAHEFLNFLINHINEVILSERPQSNAKSKLSAPDGGGGDNHS 122
+L L + Y QQDAHEFL I ++ + + N K K + P NH
Sbjct: 244 LLHLVWTHARHLAGYEQQDAHEFL---IAALDVLHRHCKGDDNGK-KANNP------NHC 293
Query: 123 SSGFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVD----------------- 165
+ ++ IF G L S+ C C VS+ + F+D+ +D
Sbjct: 294 NCIIDQ------IFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPGSSTPFWPLSPGSEG 347
Query: 166 --------IKQNTSITQCLRGFSSTETLCSDNKFKCDNCASYQEA 202
+ T++T CLR F+ E L S K KC C SYQE+
Sbjct: 348 NVVNGESHVSGTTTLTDCLRRFTRPEHLGSSAKIKCSGCHSYQES 392
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVL--EYKAKNKKNKETLLSCLADLFHNIATHKK 284
GL+N GNTC+ N ++QAL RD L ++ + + L+ ++ LF + +
Sbjct: 177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236
Query: 285 KVGSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKC 328
P K + + Y QQDAHEFL ++ ++ C
Sbjct: 237 --SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHC 278
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAK--NKKNKETLLSCLADLFHNIATHKK 284
GL N GNTC+ NS LQ L P + L+ + N+ N + LA F ++
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 363
Query: 285 KVG--SIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
G S+AP+ F T+L + +F Y Q D+ E L FL++ ++E KVK+ P I
Sbjct: 364 SSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNKVKRKPYI 418
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPL-ELRLFHLSDDAVNPDRMYNL 385
K + + KLP IL HLKRF Y + K+ V FP+ +L L + + +Y L
Sbjct: 781 KKLDLWKLPDILVFHLKRFTYSRYLKN--KIDTFVNFPVHDLDLSKYVKNKNDQSYLYEL 838
Query: 386 VAVVIHCGSGPNRGHYISIVKSHD--FWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSET 443
AV H G GHY + K D W FDD V +++S I++
Sbjct: 839 YAVSNHYGGL-GGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKN------------SA 885
Query: 444 GYILFYQS-RDSTDARTM 460
Y+LFY+ R T+ +T+
Sbjct: 886 AYVLFYRRVRSETETQTV 903
>sp|Q28CN3|UBP33_XENTR Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis
GN=usp33 PE=2 SV=1
Length = 892
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 330 KVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMYNLV 386
KV+K P IL +HLKRF++ ++ K+ V FPLE L+ F L+ D+ + Y+L+
Sbjct: 554 KVQKFPEILCIHLKRFRH--ELMFSTKIGTHVSFPLEGLDLQPF-LAKDSPSQIVTYDLL 610
Query: 387 AVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETG 444
+V+ H G+ + GHYI+ ++ ++ W FDD V ++ ++T+++
Sbjct: 611 SVICHHGTA-SSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQN------------AEA 657
Query: 445 YILFYQSRDSTDARTMNSNDCRVN 468
Y+LFY+ + C +N
Sbjct: 658 YVLFYRKASEEAQKERRRVSCLLN 681
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTCY N+ LQAL C P L+ + +K+ L + HK +
Sbjct: 149 GLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDKKPALCKSYQKLMSDIWHKNRP 208
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
G + P ++ F Y QQDA EFL L++ ++E+
Sbjct: 209 GFVIPTNLFQGIKSVNPTFRGYSQQDAQEFLRCLMDVLHEE 249
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 5/116 (4%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
GL N GNTC+ NS LQ L P + L+ + + + N++ L ++ A K++
Sbjct: 303 GLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAELIKQM 362
Query: 287 GS-----IAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEKCMKVKKLPMI 337
S +AP+ F T++ + +F Y QQD+ E L F+++ ++E +VKK P +
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYL 418
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 24/126 (19%)
Query: 334 LPMILALHLKRFKYMDKMNRHVKVSHRVVFPLELRLFHLS----DDAVNPDRMYNLVAVV 389
LP IL +HLKRF Y NR+ + V +R ++S D A P +Y+L+AV
Sbjct: 815 LPKILVVHLKRFSY----NRYWRDKLDTVVEFPVRALNMSEFVCDRAARP-YVYDLIAVS 869
Query: 390 IHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSSETGYIL 447
H G+ GHY + K+ + W FDD V L S+ Q ++ Y+L
Sbjct: 870 NHYGAM-GVGHYTAYAKNRLNGKWYYFDDSSVS------------LASEDQIVTKAAYVL 916
Query: 448 FYQSRD 453
FYQ RD
Sbjct: 917 FYQRRD 922
Score = 32.3 bits (72), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 71 SDEFDNYMQQDAHEFLNFLINHINEVI--LSERPQSNAKSKLSAPDG----GGGDNHSSS 124
+ +F Y QQD+ E L F+++ ++E + + ++P K PD +NH
Sbjct: 383 APQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPYLEPKDANGRPDAVVAKEAWENHR-- 440
Query: 125 GFEEPTWVHEIFQGILTSETKCLNCETVSSKDEDFFDLQVDI 166
+ + + F G+ S C C VS + F L + +
Sbjct: 441 -LRNDSVIVDTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPL 481
>sp|A0JM59|UBP20_XENTR Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis
GN=usp20 PE=2 SV=1
Length = 884
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 26/149 (17%)
Query: 327 KCMKVKKLPMILALHLKRFKYMDKMNRHVKVSHRVVFPLE---LRLFHLSDDAVNPDRMY 383
K KV +LP IL +HLKRF++ ++ K+ V FPLE LR F L+ + V+ Y
Sbjct: 541 KYCKVLRLPEILCIHLKRFRH--EVMYSFKIGSHVSFPLEGLNLRPF-LAKECVSRITTY 597
Query: 384 NLVAVVIHCGSGPNRGHYISIVKS--HDFWLLFDDDVVDKIDQSTIEDFFGLTSDHQKSS 441
+L+AV+ H GS + GHYIS ++ + W FDD V ++ ++ +++ ++KSS
Sbjct: 598 DLLAVICHHGSA-SSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSS 656
Query: 442 -----------------ETGYILFYQSRD 453
E+G + FY SR+
Sbjct: 657 EEAERERQKVVSLAAMKESGLLQFYISRE 685
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%)
Query: 227 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKNKKNKETLLSCLADLFHNIATHKKKV 286
G+ N GN+CY N+ LQAL C P LE + +K+ L + HKK+
Sbjct: 146 GMKNIGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPALCKSYQKLISELWHKKRP 205
Query: 287 GSIAPKKFITRLRKEKDEFDNYMQQDAHEFLNFLINHINEK 327
+ P ++ F Y QQD EFL L++ ++E+
Sbjct: 206 SYVVPSSLYHGIKLINPLFRGYSQQDTQEFLRCLMDQLHEE 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,081,874
Number of Sequences: 539616
Number of extensions: 7829446
Number of successful extensions: 18053
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 16505
Number of HSP's gapped (non-prelim): 1082
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)