BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2131
(328 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 466 bits (1200), Expect = e-132, Method: Compositional matrix adjust.
Identities = 229/304 (75%), Positives = 250/304 (82%), Gaps = 28/304 (9%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRC++ TG E+AAKIINTKKLSARD QKLEREARICR L+HPNIVRLHDSI E
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYLVFDLVTGGELFEDIVARE+YSEADASHCIQQILESVNHCH NG+VHRDLKPENL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASK+KGAAVKLADFGLAIEVQG+QQAWF GV
Sbjct: 135 LLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV 194
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLY QIKAGAYD+PSPEWDTVTPEAK+LIN+MLT+NP+KRIT
Sbjct: 195 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 254
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGTPGYLSPEVLKK 272
ASEALKHPWICQR VAS++HRQETVDCLKKFNARRKLK + T + + + L K
Sbjct: 255 ASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAKSLLK 314
Query: 273 EPYG 276
+P G
Sbjct: 315 KPDG 318
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+K+PYGKPVD+WACGVILYILLVGYPPFWDEDQHRLY QIKAGAYD
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 460 bits (1183), Expect = e-130, Method: Compositional matrix adjust.
Identities = 224/279 (80%), Positives = 240/279 (86%), Gaps = 28/279 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRC++ TG E+AAKIINTKKLSARD QKLEREARICR L+HPNIVRLHDSI E
Sbjct: 15 GAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYLVFDLVTGGELFEDIVARE+YSEADASHCIQQILESVNHCH NG+VHRDLKPENL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENL 134
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASK+KGAAVKLADFGLAIEVQG+QQAWF GV
Sbjct: 135 LLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGV 194
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLY QIKAGAYD+PSPEWDTVTPEAK+LIN+MLT+NP+KRIT
Sbjct: 195 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT 254
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
ASEALKHPWICQR VAS++HRQETVDCLKKFNARRKLK
Sbjct: 255 ASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+K+PYGKPVD+WACGVILYILLVGYPPFWDEDQHRLY QIKAGAYD
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 232/311 (74%), Positives = 248/311 (79%), Gaps = 31/311 (9%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV K TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE
Sbjct: 40 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 99
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E++HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES+ +CHSNG+VHR+LKPENL
Sbjct: 100 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENL 159
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASKAKGAAVKLADFGLAIEV + +AW GV
Sbjct: 160 LLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 218
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK+LI+ MLTVNP KRIT
Sbjct: 219 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 278
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGTPGY--LSPEVL 270
A +ALK PWIC RERVAS +HRQ+TVDCLKKFNARRKLK + T L +L
Sbjct: 279 ADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIATRNLSNLGRNLL 338
Query: 271 KKEPYGKPVDI 281
K+ G P I
Sbjct: 339 NKKEQGPPSTI 349
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 59/61 (96%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GFAGTPGYLSPEVLKK+PY KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 247
Query: 316 D 316
D
Sbjct: 248 D 248
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 447 bits (1151), Expect = e-126, Method: Compositional matrix adjust.
Identities = 220/279 (78%), Positives = 235/279 (84%), Gaps = 28/279 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV+ TG E+AAKIINTKKLSARD QKLEREARICR L+H NIVRLHDSI E
Sbjct: 15 GAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISE 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYLVFDLVTGGELFEDIVARE+YSEADASHCIQQILE+V HCH GVVHRDLKPENL
Sbjct: 75 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 134
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWFG----------------------------V 152
LLASK KGAAVKLADFGLAIEVQG+QQAWFG V
Sbjct: 135 LLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGV 194
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQH+LY QIKAGAYD+PSPEWDTVTPEAKNLINQMLT+NP+KRIT
Sbjct: 195 ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 254
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
A EALKHPW+CQR VAS++HRQETV+CLKKFNARRKLK
Sbjct: 255 AHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 58/60 (96%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+KE YGKPVDIWACGVILYILLVGYPPFWDEDQH+LY QIKAGAYD
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 217/279 (77%), Positives = 234/279 (83%), Gaps = 28/279 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV+K E+AAKIINTKKLSARD QKLEREARICR L+HPNIVRLHDSI E
Sbjct: 42 GAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 101
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYLVFDLVTGGELFEDIVARE+YSEADASHCI QILESVNH H + +VHRDLKPENL
Sbjct: 102 EGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENL 161
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASK KGAAVKLADFGLAIEVQGEQQAWF GV
Sbjct: 162 LLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGV 221
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQH+LY QIKAGAYD+PSPEWDTVTPEAKNLINQMLT+NP+KRIT
Sbjct: 222 ILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT 281
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
A +ALKHPW+CQR VAS++HRQETV+CL+KFNARRKLK
Sbjct: 282 ADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLK 320
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+K+PYGKPVDIWACGVILYILLVGYPPFWDEDQH+LY QIKAGAYD
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 443 bits (1139), Expect = e-125, Method: Compositional matrix adjust.
Identities = 219/279 (78%), Positives = 233/279 (83%), Gaps = 28/279 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV+ G E+AAKIINTKKLSARD QKLEREARICR L+HPNIVRLHDSI E
Sbjct: 33 GAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYL+FDLVTGGELFEDIVARE+YSEADASHCIQQILE+V HCH GVVHRDLKPENL
Sbjct: 93 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 152
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASK KGAAVKLADFGLAIEV+GEQQAWF GV
Sbjct: 153 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 212
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLY QIKAGAYD+PSPEWDTVTPEAK+LIN+MLT+NPSKRIT
Sbjct: 213 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT 272
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
A+EALKHPWI R VAS +HRQETVDCLKKFNARRKLK
Sbjct: 273 AAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+K+PYGKPVD+WACGVILYILLVGYPPFWDEDQHRLY QIKAGAYD
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 439 bits (1128), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/279 (77%), Positives = 232/279 (83%), Gaps = 28/279 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV+ G E+AA IINTKKLSARD QKLEREARICR L+HPNIVRLHDSI E
Sbjct: 22 GAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE 81
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E +HYL+FDLVTGGELFEDIVARE+YSEADASHCIQQILE+V HCH GVVHR+LKPENL
Sbjct: 82 EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENL 141
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASK KGAAVKLADFGLAIEV+GEQQAWF GV
Sbjct: 142 LLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLY QIKAGAYD+PSPEWDTVTPEAK+LIN+MLT+NPSKRIT
Sbjct: 202 ILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT 261
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
A+EALKHPWI R VAS +HRQETVDCLKKFNARRKLK
Sbjct: 262 AAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 300
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 56/60 (93%), Positives = 59/60 (98%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GFAGTPGYLSPEVL+K+PYGKPVD+WACGVILYILLVGYPPFWDEDQHRLY QIKAGAYD
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/269 (79%), Positives = 227/269 (84%), Gaps = 29/269 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV K TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E++HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES+ +CHSNG+VHR+LKPENL
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASKAKGAAVKLADFGLAIEV + +AW GV
Sbjct: 137 LLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK+LI+ MLTVNP KRIT
Sbjct: 196 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 255
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCL 241
A +ALK PWIC RERVAS +HRQ+ VDCL
Sbjct: 256 ADQALKVPWICNRERVASAIHRQDXVDCL 284
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 59/61 (96%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GFAGTPGYLSPEVLKK+PY KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 224
Query: 316 D 316
D
Sbjct: 225 D 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 429 bits (1104), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/268 (79%), Positives = 226/268 (84%), Gaps = 29/268 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV K TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE
Sbjct: 16 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E++HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES+ +CHSNG+VHR+LKPENL
Sbjct: 76 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASKAKGAAVKLADFGLAIEV + +AW GV
Sbjct: 136 LLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 194
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK+LI+ MLTVNP KRIT
Sbjct: 195 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 254
Query: 213 ASEALKHPWICQRERVASIVHRQETVDC 240
A +ALK PWIC RERVAS +HRQ+ VDC
Sbjct: 255 ADQALKVPWICNRERVASAIHRQDXVDC 282
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 59/61 (96%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GFAGTPGYLSPEVLKK+PY KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 223
Query: 316 D 316
D
Sbjct: 224 D 224
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/254 (79%), Positives = 214/254 (84%), Gaps = 29/254 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFSVVRRCV K TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE
Sbjct: 17 GAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E++HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES+ +CHSNG+VHR+LKPENL
Sbjct: 77 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQAWF----------------------------GV 152
LLASKAKGAAVKLADFGLAIEV + +AW GV
Sbjct: 137 LLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK+LI+ MLTVNP KRIT
Sbjct: 196 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT 255
Query: 213 ASEALKHPWICQRE 226
A +ALK PWIC RE
Sbjct: 256 ADQALKVPWICNRE 269
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 58/61 (95%), Positives = 59/61 (96%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GFAGTPGYLSPEVLKK+PY KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 224
Query: 316 D 316
D
Sbjct: 225 D 225
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 122/287 (42%), Positives = 173/287 (60%), Gaps = 38/287 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR---DFQKLEREARICRKLQHPNIVRLHDS 57
GAFSVVRRC+ + TG +FA KI++ K ++ + L+REA IC L+HP+IV L ++
Sbjct: 35 GAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 58 IQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHR 113
+ Y+VF+ + G +L +IV R YSEA ASH ++QILE++ +CH N ++HR
Sbjct: 95 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR 154
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ--------------------------- 146
D+KPEN+LLASK A VKL DFG+AI++ GE
Sbjct: 155 DVKPENVLLASKENSAPVKLGDFGVAIQL-GESGLVAGGRVGTPHFMAPEVVKREPYGKP 213
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W GVIL+ILL G PF+ + RL+ I G Y +W ++ AK+L+ +ML
Sbjct: 214 VDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 272
Query: 205 VNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
++P++RIT EAL HPW+ +R+R A +H ETV+ L+KFNARRKLK
Sbjct: 273 LDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLK 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
G GTP +++PEV+K+EPYGKPVD+W CGVIL+ILL G PF+ + RL+ I G Y
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYK 250
Query: 317 DEPKHKS 323
P+ S
Sbjct: 251 MNPRQWS 257
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 169/287 (58%), Gaps = 38/287 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR---DFQKLEREARICRKLQHPNIVRLHDS 57
G FSVVRRC+ + TG +FA KI++ K ++ + L+REA IC L+HP+IV L ++
Sbjct: 37 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 96
Query: 58 IQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHR 113
+ Y+VF+ + G +L +IV R YSEA ASH ++QILE++ +CH N ++HR
Sbjct: 97 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR 156
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ--------------------------- 146
D+KP +LLASK A VKL FG+AI++ GE
Sbjct: 157 DVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGRVGTPHFMAPEVVKREPYGKP 215
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W GVIL+ILL G PF+ + RL+ I G Y +W ++ AK+L+ +ML
Sbjct: 216 VDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 274
Query: 205 VNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
++P++RIT EAL HPW+ +R+R A +H ETV+ L+KFNARRKLK
Sbjct: 275 LDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLK 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
G GTP +++PEV+K+EPYGKPVD+W CGVIL+ILL G PF+ + RL+ I G Y
Sbjct: 194 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYK 252
Query: 317 DEPKHKS 323
P+ S
Sbjct: 253 MNPRQWS 259
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 209 bits (533), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 169/287 (58%), Gaps = 38/287 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR---DFQKLEREARICRKLQHPNIVRLHDS 57
G FSVVRRC+ + TG +FA KI++ K ++ + L+REA IC L+HP+IV L ++
Sbjct: 35 GPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLET 94
Query: 58 IQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHR 113
+ Y+VF+ + G +L +IV R YSEA ASH ++QILE++ +CH N ++HR
Sbjct: 95 YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHR 154
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ--------------------------- 146
D+KP +LLASK A VKL FG+AI++ GE
Sbjct: 155 DVKPHCVLLASKENSAPVKLGGFGVAIQL-GESGLVAGGRVGTPHFMAPEVVKREPYGKP 213
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W GVIL+ILL G PF+ + RL+ I G Y +W ++ AK+L+ +ML
Sbjct: 214 VDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLM 272
Query: 205 VNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLK 251
++P++RIT EAL HPW+ +R+R A +H ETV+ L+KFNARRKLK
Sbjct: 273 LDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLK 319
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
G GTP +++PEV+K+EPYGKPVD+W CGVIL+ILL G PF+ + RL+ I G Y
Sbjct: 192 GRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYK 250
Query: 317 DEPKHKS 323
P+ S
Sbjct: 251 MNPRQWS 257
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 165/280 (58%), Gaps = 30/280 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V +C + T E+A K+IN +D + RE + +KL HPNI++L + +++
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ Y+V +L TGGELF++I+ R+ +SE DA+ I+Q+ + + H + +VHRDLKPEN+
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVIL 154
LL SK K +K+ DFGL+ Q + A++ GVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
YILL G PPF+ ++++ + +++ G Y + P+W T++ +AK+LI +MLT +PS RITA+
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 215 EALKHPWI----CQRERVASIVHRQETVDCLKKFNARRKL 250
+ L+HPWI + ++ + + + +++F A +KL
Sbjct: 273 QCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKL 312
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GT Y++PEVL+ Y + D+W+ GVILYILL G PPF+ ++++ + +++ G Y
Sbjct: 185 GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 159/288 (55%), Gaps = 33/288 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V +KATG FA K I K L ++ +E E + RK++H NIV L D +
Sbjct: 33 GAFSEVVLAEEKATGKLFAVKCIPKKALKGKE-SSIENEIAVLRKIKHENIVALEDIYES 91
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N+ YLV LV+GGELF+ IV + FY+E DAS I+Q+L++V + H G+VHRDLKPENL
Sbjct: 92 PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 121 LLASKAKGAAVKLADFGLA-IEVQGEQQA-------------------------W-FGVI 153
L S+ + + + ++DFGL+ +E +G+ + W GVI
Sbjct: 152 LYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
YILL GYPPF+DE+ +L+ QI Y++ SP WD ++ AK+ I ++ +P+KR T
Sbjct: 212 AYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTC 271
Query: 214 SEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGT 261
+A +HPWI + +H + K F K RQ F T
Sbjct: 272 EQAARHPWIAGDTALNKNIHESVSAQIRKNF-----AKSKWRQAFNAT 314
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF+DE+ +L+ QI Y+ D
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDS 243
Query: 319 P 319
P
Sbjct: 244 P 244
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 151/248 (60%), Gaps = 26/248 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V +C + T E+A K+IN +D + RE + +KL HPNI++L + +++
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ Y+V +L TGGELF++I+ R+ +SE DA+ I+Q+ + + H + +VHRDLKPEN+
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVIL 154
LL SK K +K+ DFGL+ Q + A++ GVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
YILL G PPF+ ++++ + +++ G Y + P+W T++ +AK+LI +MLT +PS RITA+
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 215 EALKHPWI 222
+ L+HPWI
Sbjct: 273 QCLEHPWI 280
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GT Y++PEVL+ Y + D+W+ GVILYILL G PPF+ ++++ + +++ G Y D
Sbjct: 185 GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243
Query: 319 PKHKSAS 325
P+ ++ S
Sbjct: 244 PQWRTIS 250
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 151/248 (60%), Gaps = 26/248 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V +C + T E+A K+IN +D + RE + +KL HPNI++L + +++
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ Y+V +L TGGELF++I+ R+ +SE DA+ I+Q+ + + H + +VHRDLKPEN+
Sbjct: 93 SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENI 152
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVIL 154
LL SK K +K+ DFGL+ Q + A++ GVIL
Sbjct: 153 LLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVIL 212
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
YILL G PPF+ ++++ + +++ G Y + P+W T++ +AK+LI +MLT +PS RITA+
Sbjct: 213 YILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITAT 272
Query: 215 EALKHPWI 222
+ L+HPWI
Sbjct: 273 QCLEHPWI 280
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GT Y++PEVL+ Y + D+W+ GVILYILL G PPF+ ++++ + +++ G Y D
Sbjct: 185 GTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDL 243
Query: 319 PKHKSAS 325
P+ ++ S
Sbjct: 244 PQWRTIS 250
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 154/249 (61%), Gaps = 27/249 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V C K TG E A K+I+ +++ + D + L RE ++ ++L HPNI++L++ +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 96
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y YLV ++ TGGELF++I++R+ +SE DA+ I+Q+L + + H N +VHRDLKPEN
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 156
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVI 153
LLL SK+K A +++ DFGL+ + ++ A++ GVI
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 216
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL G PPF +++ + +++ G Y + P+W V+ AK+LI +MLT PS RI+A
Sbjct: 217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISA 276
Query: 214 SEALKHPWI 222
+AL H WI
Sbjct: 277 RDALDHEWI 285
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A +K+K GT Y++PEVL Y + D+W+ GVILYILL G PPF ++
Sbjct: 179 FEASKKMKDKI-----GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 232
Query: 304 HRLYAQIKAGAYDDE-PKHKSAS 325
+ + +++ G Y E P+ K S
Sbjct: 233 YDILKKVEKGKYTFELPQWKKVS 255
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 154/249 (61%), Gaps = 27/249 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V C K TG E A K+I+ +++ + D + L RE ++ ++L HPNI++L++ +
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y YLV ++ TGGELF++I++R+ +SE DA+ I+Q+L + + H N +VHRDLKPEN
Sbjct: 103 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVI 153
LLL SK+K A +++ DFGL+ + ++ A++ GVI
Sbjct: 163 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 222
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL G PPF +++ + +++ G Y + P+W V+ AK+LI +MLT PS RI+A
Sbjct: 223 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISA 282
Query: 214 SEALKHPWI 222
+AL H WI
Sbjct: 283 RDALDHEWI 291
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A +K+K GT Y++PEVL Y + D+W+ GVILYILL G PPF ++
Sbjct: 185 FEASKKMKDKI-----GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 238
Query: 304 HRLYAQIKAGAYDDE-PKHKSAS 325
+ + +++ G Y E P+ K S
Sbjct: 239 YDILKKVEKGKYTFELPQWKKVS 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 154/249 (61%), Gaps = 27/249 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V C K TG E A K+I+ +++ + D + L RE ++ ++L HPNI++L++ +
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 119
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y YLV ++ TGGELF++I++R+ +SE DA+ I+Q+L + + H N +VHRDLKPEN
Sbjct: 120 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 179
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVI 153
LLL SK+K A +++ DFGL+ + ++ A++ GVI
Sbjct: 180 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 239
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL G PPF +++ + +++ G Y + P+W V+ AK+LI +MLT PS RI+A
Sbjct: 240 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISA 299
Query: 214 SEALKHPWI 222
+AL H WI
Sbjct: 300 RDALDHEWI 308
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A +K+K GT Y++PEVL Y + D+W+ GVILYILL G PPF ++
Sbjct: 202 FEASKKMKDKI-----GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 255
Query: 304 HRLYAQIKAGAY 315
+ + +++ G Y
Sbjct: 256 YDILKKVEKGKY 267
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/249 (38%), Positives = 154/249 (61%), Gaps = 27/249 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V C K TG E A K+I+ +++ + D + L RE ++ ++L HPNI++L++ +
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE 120
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y YLV ++ TGGELF++I++R+ +SE DA+ I+Q+L + + H N +VHRDLKPEN
Sbjct: 121 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 180
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVI 153
LLL SK+K A +++ DFGL+ + ++ A++ GVI
Sbjct: 181 LLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 240
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL G PPF +++ + +++ G Y + P+W V+ AK+LI +MLT PS RI+A
Sbjct: 241 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISA 300
Query: 214 SEALKHPWI 222
+AL H WI
Sbjct: 301 RDALDHEWI 309
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A +K+K GT Y++PEVL Y + D+W+ GVILYILL G PPF ++
Sbjct: 203 FEASKKMKDKI-----GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE 256
Query: 304 HRLYAQIKAGAY 315
+ + +++ G Y
Sbjct: 257 YDILKKVEKGKY 268
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 165/290 (56%), Gaps = 36/290 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA S+V RC QK T +A K++ D + + E + +L HPNI++L + +
Sbjct: 64 GATSIVYRCKQKGTQKPYALKVLK----KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
LV +LVTGGELF+ IV + +YSE DA+ ++QILE+V + H NG+VHRDLKPENL
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENL 179
Query: 121 LLASKAKGAAVKLADFGLAIEVQ--------------------------GEQQAW-FGVI 153
L A+ A A +K+ADFGL+ V+ E W G+I
Sbjct: 180 LYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
Query: 154 LYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
YILL G+ PF+DE DQ ++ +I Y + SP WD V+ AK+L+ +++ ++P KR+
Sbjct: 240 TYILLCGFEPFYDERGDQF-MFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRL 298
Query: 212 TASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGT 261
T +AL+HPW+ + A+ VH L++FNARRKLK + + A +
Sbjct: 299 TTFQALQHPWVTG--KAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
GTPGY +PE+L+ YG VD+W+ G+I YILL G+ PF+DE
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDE 253
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 191 bits (485), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 155/280 (55%), Gaps = 30/280 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V C K T +E A KII +S KL E + + L HPNI++L+D ++
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED 107
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +YLV + GGELF++I+ R ++E DA+ I+Q+L V + H + +VHRDLKPENL
Sbjct: 108 KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENL 167
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQ-------------------------AW-FGVIL 154
LL SK K A +K+ DFGL+ + +++ W GVIL
Sbjct: 168 LLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVIL 227
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
+ILL GYPPF + + +++ G Y + SPEW V+ AK+LI QML + +RI+A
Sbjct: 228 FILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQ 287
Query: 215 EALKHPWI----CQRERVASIVHRQETVDCLKKFNARRKL 250
+AL+HPWI ++E + ++ ++KF +KL
Sbjct: 288 QALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKL 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GT Y++PEVL+K+ Y + D+W+ GVIL+ILL GYPPF + + +++ G Y D
Sbjct: 200 GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS 258
Query: 319 PKHKSAS 325
P+ K+ S
Sbjct: 259 PEWKNVS 265
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 188 bits (478), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 152/249 (61%), Gaps = 27/249 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V C K TG E A K+I+ +++ + D + L RE ++ ++L HPNI +L++ +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y YLV ++ TGGELF++I++R+ +SE DA+ I+Q+L + + H N +VHRDLKPEN
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPEN 156
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF-------------------GVI 153
LLL SK+K A +++ DFGL+ + ++ A++ GVI
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVI 216
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL G PPF +++ + +++ G Y + P+W V+ AK+LI + LT PS RI+A
Sbjct: 217 LYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISA 276
Query: 214 SEALKHPWI 222
+AL H WI
Sbjct: 277 RDALDHEWI 285
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GT Y++PEVL Y + D+W+ GVILYILL G PPF +++ + +++ G Y
Sbjct: 190 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKY 244
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 160/281 (56%), Gaps = 31/281 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQ 59
GA+ V C K TG E A KII ++ + L E + ++L HPNI++L++ +
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +YLV ++ GGELF++I+ R+ +SE DA+ ++Q+L + H + +VHRDLKPEN
Sbjct: 75 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPEN 134
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQ-----AWF-------------------GVI 153
LLL SK++ A +K+ DFGL+ EV G+ + A++ GVI
Sbjct: 135 LLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVI 194
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL GYPPF + + +++ G + + P+W V+ EAK L+ MLT PSKRI+A
Sbjct: 195 LYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISA 254
Query: 214 SEALKHPWI---CQRERVASIVHR-QETVDCLKKFNARRKL 250
EAL HPWI C ++ H + +KKF + +KL
Sbjct: 255 EEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKL 295
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GT Y++PEVL+K+ Y + D+W+CGVILYILL GYPPF + + +++ G + +P
Sbjct: 168 GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDP 226
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 148/251 (58%), Gaps = 27/251 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQ 59
GA+ V C K TG E A KII ++ + L E + ++L HPNI++L++ +
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFE 91
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +YLV ++ GGELF++I+ R+ +SE DA+ ++Q+L + H + +VHRDLKPEN
Sbjct: 92 DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPEN 151
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQ-----AWF-------------------GVI 153
LLL SK++ A +K+ DFGL+ EV G+ + A++ GVI
Sbjct: 152 LLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVI 211
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
LYILL GYPPF + + +++ G + + P+W V+ EAK L+ MLT PSKRI+A
Sbjct: 212 LYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISA 271
Query: 214 SEALKHPWICQ 224
EAL HPWI +
Sbjct: 272 EEALNHPWIVK 282
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GT Y++PEVL+K+ Y + D+W+CGVILYILL GYPPF + + +++ G + +P
Sbjct: 185 GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDP 243
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 187 bits (474), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 143/248 (57%), Gaps = 28/248 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V Q+ TG FA K I KK A LE E + +K++H NIV L D +
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYES 77
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
++YLV LV+GGELF+ I+ R Y+E DAS IQQ+L +V + H NG+VHRDLKPENL
Sbjct: 78 TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENL 137
Query: 121 LLASKAKGAAVKLADFGL-------------------AIEVQGEQ------QAW-FGVIL 154
L + + + + + DFGL A EV ++ W GVI
Sbjct: 138 LYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIT 197
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
YILL GYPPF++E + +L+ +IK G Y++ SP WD ++ AK+ I +L +P++R T
Sbjct: 198 YILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCE 257
Query: 215 EALKHPWI 222
+AL HPWI
Sbjct: 258 KALSHPWI 265
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF++E + +L+ +IK G Y+ E
Sbjct: 169 GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/288 (38%), Positives = 154/288 (53%), Gaps = 33/288 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V K T A K I K L ++ +E E + K++HPNIV L D +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YL+ LV+GGELF+ IV + FY+E DAS I Q+L++V + H G+VHRDLKPENL
Sbjct: 88 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 121 LLASKAKGAAVKLADFGL--------------------AIEVQGEQ------QAW-FGVI 153
L S + + + ++DFGL A EV ++ W GVI
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
YILL GYPPF+DE+ +L+ QI Y++ SP WD ++ AK+ I ++ +P KR T
Sbjct: 208 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC 267
Query: 214 SEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGT 261
+AL+HPWI + +H Q + +KK A+ K K Q F T
Sbjct: 268 EQALQHPWIAGDTALDKNIH-QSVSEQIKKNFAKSKWK----QAFNAT 310
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF+DE+ +L+ QI Y+ D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 319 P 319
P
Sbjct: 240 P 240
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 154/288 (53%), Gaps = 33/288 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V K T A K I + L ++ +E E + K++HPNIV L D +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YL+ LV+GGELF+ IV + FY+E DAS I Q+L++V + H G+VHRDLKPENL
Sbjct: 88 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 121 LLASKAKGAAVKLADFGL--------------------AIEVQGEQ------QAW-FGVI 153
L S + + + ++DFGL A EV ++ W GVI
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
YILL GYPPF+DE+ +L+ QI Y++ SP WD ++ AK+ I ++ +P KR T
Sbjct: 208 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC 267
Query: 214 SEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGT 261
+AL+HPWI + +H Q + +KK A+ K K Q F T
Sbjct: 268 EQALQHPWIAGDTALDKNIH-QSVSEQIKKNFAKSKWK----QAFNAT 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF+DE+ +L+ QI Y+ D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 319 P 319
P
Sbjct: 240 P 240
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 154/288 (53%), Gaps = 33/288 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V K T A K I + L ++ +E E + K++HPNIV L D +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YL+ LV+GGELF+ IV + FY+E DAS I Q+L++V + H G+VHRDLKPENL
Sbjct: 88 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 121 LLASKAKGAAVKLADFGL--------------------AIEVQGEQ------QAW-FGVI 153
L S + + + ++DFGL A EV ++ W GVI
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
YILL GYPPF+DE+ +L+ QI Y++ SP WD ++ AK+ I ++ +P KR T
Sbjct: 208 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC 267
Query: 214 SEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGT 261
+AL+HPWI + +H Q + +KK A+ K K Q F T
Sbjct: 268 EQALQHPWIAGDTALDKNIH-QSVSEQIKKNFAKSKWK----QAFNAT 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF+DE+ +L+ QI Y+ D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 319 P 319
P
Sbjct: 240 P 240
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 143/261 (54%), Gaps = 28/261 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAFS V K T A K I + L ++ +E E + K++HPNIV L D +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKE-GSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YL+ LV+GGELF+ IV + FY+E DAS I Q+L++V + H G+VHRDLKPENL
Sbjct: 88 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 121 LLASKAKGAAVKLADFGL--------------------AIEVQGEQ------QAW-FGVI 153
L S + + + ++DFGL A EV ++ W GVI
Sbjct: 148 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
YILL GYPPF+DE+ +L+ QI Y++ SP WD ++ AK+ I ++ +P KR T
Sbjct: 208 AYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC 267
Query: 214 SEALKHPWICQRERVASIVHR 234
+AL+HPWI + +H+
Sbjct: 268 EQALQHPWIAGDTALDKNIHQ 288
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DE 318
GTPGY++PEVL ++PY K VD W+ GVI YILL GYPPF+DE+ +L+ QI Y+ D
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDS 239
Query: 319 P 319
P
Sbjct: 240 P 240
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/318 (33%), Positives = 164/318 (51%), Gaps = 36/318 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF----QKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ HPNI+ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I A +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNARRKLKVSTRQGFAGTPGYLS 266
KR+T EAL+HPWI + ++V R+ V+ KK RR+ K+S +L+
Sbjct: 263 KRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKLSF--SIVSLCNHLT 320
Query: 267 PEVLKKEPYGKPVDIWAC 284
++KK D+ C
Sbjct: 321 RSLMKKVHLRTSEDLRNC 338
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I A +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 28/248 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++ V+ VQK T + AAK I K D + ++E I + L HPNI+RL+++ ++
Sbjct: 37 GSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED 94
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
YLV +L TGGELFE +V + + E+DA+ ++ +L +V +CH V HRDLKPEN
Sbjct: 95 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENF 154
Query: 121 LLASKAKGAAVKLADFGLAIEVQ-------------------------GEQQAWF-GVIL 154
L + + + +KL DFGLA + E W GV++
Sbjct: 155 LFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMM 214
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
Y+LL GYPPF + +I+ G + +P +W V+P+A++LI ++LT +P +RIT+
Sbjct: 215 YVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSL 274
Query: 215 EALKHPWI 222
+AL+H W
Sbjct: 275 QALEHEWF 282
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GTP Y+SP+VL+ YG D W+ GV++Y+LL GYPPF + +I+ G +
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 241
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 138/248 (55%), Gaps = 28/248 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++ V+ VQK T + AAK I K D + ++E I + L HPNI+RL+++ ++
Sbjct: 20 GSWGEVKIAVQKGTRIRRAAKKI--PKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFED 77
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
YLV +L TGGELFE +V + + E+DA+ ++ +L +V +CH V HRDLKPEN
Sbjct: 78 NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENF 137
Query: 121 LLASKAKGAAVKLADFGLAIEVQ-------------------------GEQQAWF-GVIL 154
L + + + +KL DFGLA + E W GV++
Sbjct: 138 LFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMM 197
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITAS 214
Y+LL GYPPF + +I+ G + +P +W V+P+A++LI ++LT +P +RIT+
Sbjct: 198 YVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSL 257
Query: 215 EALKHPWI 222
+AL+H W
Sbjct: 258 QALEHEWF 265
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GTP Y+SP+VL+ YG D W+ GV++Y+LL GYPPF + +I+ G +
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 34/287 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ H N++ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I A +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNARRKLKVS 253
KR+T EAL+HPWI + ++V R+ V+ +K RR+ K++
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLA 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I A +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 152/286 (53%), Gaps = 34/286 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ H N++ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I A +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNARRKLKV 252
KR+T EAL+HPWI + ++V R+ V+ +K RR+ K+
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKL 308
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I A +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD 236
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 34/287 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ H N++ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I + +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNARRKLKVS 253
KR+T EAL+HPWI + ++V R+ V+ +K RR+ K+S
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLS 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I + +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 144/262 (54%), Gaps = 43/262 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKI--INTKKLSARDFQKLE----REARICRKLQ-HPNIVR 53
G SVVRRCV +ATG EFA KI + ++LS +++ RE I R++ HP+I+
Sbjct: 105 GVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 54 LHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
L DS + ++ +LVFDL+ GELF+ + + SE + ++ +LE+V+ H+N +VHR
Sbjct: 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQ-GEQ-------------------------- 146
DLKPEN+LL + ++L+DFG + ++ GE+
Sbjct: 225 DLKPENILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPG 281
Query: 147 -----QAWF-GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLIN 200
W GVIL+ LL G PPFW Q + I G Y + SPEWD + K+LI+
Sbjct: 282 YGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS 341
Query: 201 QMLTVNPSKRITASEALKHPWI 222
++L V+P R+TA +AL+HP+
Sbjct: 342 RLLQVDPEARLTAEQALQHPFF 363
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Query: 258 FAGTPGYLSPEVLK-----KEP-YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
GTPGYL+PE+LK P YGK VD+WACGVIL+ LL G PPFW Q + I
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM 318
Query: 312 AGAY 315
G Y
Sbjct: 319 EGQY 322
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 164 bits (415), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 153/287 (53%), Gaps = 34/287 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ H N++ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I + +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNARRKLKVS 253
KR+T EAL+HPWI + ++V R+ V+ +K RR+ K++
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLA 309
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I + +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++VR+C QK TG E+AAK I ++LS+ +++ERE I R+++HPNI+ LHD
Sbjct: 16 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 75
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV+GGELF+ + +E +E +A+ ++QIL+ V++ HS + H DLK
Sbjct: 76 IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK 135
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFG+A +++ E W
Sbjct: 136 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 195
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF E + I A YD+ + + AK+ I ++L +P
Sbjct: 196 SIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 255
Query: 209 KRITASEALKHPWI 222
+R+T +++L+H WI
Sbjct: 256 RRMTIAQSLEHSWI 269
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF E + I A YD
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 143/254 (56%), Gaps = 37/254 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++SV +RC+ KAT +EFA KII+ K RD E + R QHPNI+ L D +
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSK---RD--PTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
Y Y+V +L+ GGEL + I+ ++F+SE +AS + I ++V + H+ GVVHRDLKP N+
Sbjct: 88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 121 LLASKAKGA-AVKLADFGLA------------------------IEVQGEQQA---W-FG 151
L ++ ++++ DFG A +E QG A W G
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLG 207
Query: 152 VILYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
V+LY +L GY PF D+ + A+I +G + W++V+ AK+L+++ML V+P
Sbjct: 208 VLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPH 267
Query: 209 KRITASEALKHPWI 222
+R+TA+ L+HPWI
Sbjct: 268 QRLTAALVLRHPWI 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQHRLYAQIKAGAY 315
T +++PEVL+++ Y DIW+ GV+LY +L GY PF D+ + A+I +G +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF 240
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++VR+C QK TG E+AAK I ++LS+ +++ERE I R+++HPNI+ LHD
Sbjct: 23 GQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV+GGELF+ + +E +E +A+ ++QIL+ V++ HS + H DLK
Sbjct: 83 IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK 142
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFG+A +++ E W
Sbjct: 143 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF E + I A YD+ + + AK+ I ++L +P
Sbjct: 203 SIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 262
Query: 209 KRITASEALKHPWI 222
+R+ +++L+H WI
Sbjct: 263 RRMXIAQSLEHSWI 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF E + I A YD +
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 320 KHKSAS 325
++ S +
Sbjct: 240 EYFSNT 245
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 142/266 (53%), Gaps = 32/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRLHD 56
G F++V++C +K+TGLE+AAK I ++ A +++ERE I R++ H N++ LHD
Sbjct: 23 GQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ L+ +LV+GGELF+ + +E SE +A+ I+QIL+ VN+ H+ + H DLK
Sbjct: 83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLK 142
Query: 117 PENLLLASKAKGAA-VKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFGLA E++ E W
Sbjct: 143 PENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMW 202
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A I + +YD+ + + AK+ I ++L
Sbjct: 203 SIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETR 262
Query: 209 KRITASEALKHPWICQRERVASIVHR 234
KR+T EAL+HPWI + ++V R
Sbjct: 263 KRLTIQEALRHPWITPVDNQQAMVRR 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A I + +YD
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD 236
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 134/265 (50%), Gaps = 44/265 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK---KLSARDFQKLE----REARICRKLQ-HPNIV 52
G SVVRRC+ K T E+A KII+ SA + Q+L +E I RK+ HPNI+
Sbjct: 15 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 74
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVH 112
+L D+ + + +LVFDL+ GELF+ + + SE + ++ +LE + H +VH
Sbjct: 75 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 134
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAI---------EVQG------------------- 144
RDLKPEN+LL +KL DFG + EV G
Sbjct: 135 RDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 191
Query: 145 ----EQQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLI 199
E W GVI+Y LL G PPFW Q + I +G Y + SPEWD + K+L+
Sbjct: 192 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 251
Query: 200 NQMLTVNPSKRITASEALKHPWICQ 224
++ L V P KR TA EAL HP+ Q
Sbjct: 252 SRFLVVQPQKRYTAEEALAHPFFQQ 276
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 259 AGTPGYLSPEVLK-----KEP-YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 312
GTP YL+PE+++ P YGK VD+W+ GVI+Y LL G PPFW Q + I +
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 313 GAY 315
G Y
Sbjct: 231 GNY 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 134/265 (50%), Gaps = 44/265 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK---KLSARDFQKLE----REARICRKLQ-HPNIV 52
G SVVRRC+ K T E+A KII+ SA + Q+L +E I RK+ HPNI+
Sbjct: 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVH 112
+L D+ + + +LVFDL+ GELF+ + + SE + ++ +LE + H +VH
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAI---------EVQG------------------- 144
RDLKPEN+LL +KL DFG + EV G
Sbjct: 148 RDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHP 204
Query: 145 ----EQQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLI 199
E W GVI+Y LL G PPFW Q + I +G Y + SPEWD + K+L+
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 264
Query: 200 NQMLTVNPSKRITASEALKHPWICQ 224
++ L V P KR TA EAL HP+ Q
Sbjct: 265 SRFLVVQPQKRYTAEEALAHPFFQQ 289
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 259 AGTPGYLSPEVLK-----KEP-YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 312
GTP YL+PE+++ P YGK VD+W+ GVI+Y LL G PPFW Q + I +
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243
Query: 313 GAY 315
G Y
Sbjct: 244 GNY 246
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 135/265 (50%), Gaps = 44/265 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK---KLSARDFQKLE----REARICRKLQ-HPNIV 52
G SVVRRC+ K T E+A KII+ SA + Q+L +E I RK+ HPNI+
Sbjct: 28 GVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNII 87
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVH 112
+L D+ + + +LVFDL+ GELF+ + + SE + ++ +LE + H +VH
Sbjct: 88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVH 147
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQ-GEQ------------------------- 146
RDLKPEN+LL +KL DFG + ++ GE+
Sbjct: 148 RDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHP 204
Query: 147 ------QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLI 199
W GVI+Y LL G PPFW Q + I +G Y + SPEWD + K+L+
Sbjct: 205 GYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLV 264
Query: 200 NQMLTVNPSKRITASEALKHPWICQ 224
++ L V P KR TA EAL HP+ Q
Sbjct: 265 SRFLVVQPQKRYTAEEALAHPFFQQ 289
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 6/63 (9%)
Query: 259 AGTPGYLSPEVLK-----KEP-YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKA 312
GTP YL+PE+++ P YGK VD+W+ GVI+Y LL G PPFW Q + I +
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 243
Query: 313 GAY 315
G Y
Sbjct: 244 GNY 246
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SAR---DFQKLEREARICRKLQHPNIVRLHD 56
G F++VR+C QK TG E+AAK I ++L S+R +++ERE I R+++HPNI+ LHD
Sbjct: 37 GQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHD 96
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV+GGELF+ + +E +E +A+ ++QIL+ V++ HS + H DLK
Sbjct: 97 IFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLK 156
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L K +KL DFG+A +++ E W
Sbjct: 157 PENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 216
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF E + I A YD+ + + AK+ I ++L +P
Sbjct: 217 SIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 276
Query: 209 KRITASEALKHPWI 222
+R+ +++L+H WI
Sbjct: 277 RRMXIAQSLEHSWI 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF E + I A YD +
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 253
Query: 320 KHKSAS 325
++ S +
Sbjct: 254 EYFSNT 259
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 144/260 (55%), Gaps = 37/260 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++S +RCV KAT +E+A K+I+ K RD E + R QHPNI+ L D +
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSK---RDPS--EEIEILLRYGQHPNIITLKDVYDD 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YLV +L+ GGEL + I+ ++F+SE +AS + I ++V + HS GVVHRDLKP N+
Sbjct: 93 GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 121 LLASKAKGA-AVKLADFGLAIEVQGEQ---------------------------QAW-FG 151
L ++ +++ DFG A +++ E W G
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLG 212
Query: 152 VILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
++LY +L GY PF + + + +I +G + W+TV+ AK+L+++ML V+P
Sbjct: 213 ILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPH 272
Query: 209 KRITASEALKHPWICQRERV 228
+R+TA + L+HPW+ Q++++
Sbjct: 273 QRLTAKQVLQHPWVTQKDKL 292
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 239 DCLKKFNARRKLKVSTRQGFAGTPGY----LSPEVLKKEPYGKPVDIWACGVILYILLVG 294
+CL+ + ++ G TP Y ++PEVLK++ Y + DIW+ G++LY +L G
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Query: 295 YPPF 298
Y PF
Sbjct: 222 YTPF 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 144/260 (55%), Gaps = 37/260 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++S +RCV KAT +E+A K+I+ K RD E + R QHPNI+ L D +
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSK---RDPS--EEIEILLRYGQHPNIITLKDVYDD 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ YLV +L+ GGEL + I+ ++F+SE +AS + I ++V + HS GVVHRDLKP N+
Sbjct: 93 GKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
Query: 121 LLASKAKGA-AVKLADFGLAIEVQGEQ---------------------------QAW-FG 151
L ++ +++ DFG A +++ E W G
Sbjct: 153 LYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLG 212
Query: 152 VILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
++LY +L GY PF + + + +I +G + W+TV+ AK+L+++ML V+P
Sbjct: 213 ILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPH 272
Query: 209 KRITASEALKHPWICQRERV 228
+R+TA + L+HPW+ Q++++
Sbjct: 273 QRLTAKQVLQHPWVTQKDKL 292
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 239 DCLKKFNARRKLKVSTRQGFAGTPGY----LSPEVLKKEPYGKPVDIWACGVILYILLVG 294
+CL+ + ++ G TP Y ++PEVLK++ Y + DIW+ G++LY +L G
Sbjct: 162 ECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
Query: 295 YPPF 298
Y PF
Sbjct: 222 YTPF 225
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 149/281 (53%), Gaps = 34/281 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC--LKKFNAR 247
KR+T ++L+HPWI ++ ++ + V+ KKF AR
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEKFKKFAAR 302
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 152/293 (51%), Gaps = 46/293 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLER-------EARICRKLQHP 49
GA+ V C +K E A K+I + + D + +E+ E + + L HP
Sbjct: 47 GAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHP 106
Query: 50 NIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG 109
NI++L D +++ Y YLV + GGELFE I+ R + E DA++ ++QIL + + H +
Sbjct: 107 NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN 166
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ-------AWF------------ 150
+VHRD+KPEN+LL +K +K+ DFGL+ + + A++
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNE 226
Query: 151 -------GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
GVI+YILL GYPPF ++ + +++ G Y + +W ++ EAK LI ML
Sbjct: 227 KCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLML 286
Query: 204 TVNPSKRITASEALKHPWICQRERVASIVHRQE------TVDCLKKFNARRKL 250
T + +KR TA EAL WI ++ A+ +++ + + ++KF +KL
Sbjct: 287 TYDYNKRCTAEEALNSRWI---KKYANNINKSDQKTLCGALSNMRKFEGSQKL 336
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GT Y++PEVLKK Y + D+W+CGVI+YILL GYPPF ++ + +++ G Y
Sbjct: 210 GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/254 (36%), Positives = 139/254 (54%), Gaps = 37/254 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++SV +RC+ KAT EFA KII+ K RD E + R QHPNI+ L D +
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKSK---RD--PTEEIEILLRYGQHPNIITLKDVYDD 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
Y Y+V +L GGEL + I+ ++F+SE +AS + I ++V + H+ GVVHRDLKP N+
Sbjct: 88 GKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNI 147
Query: 121 LLASKAKGA-AVKLADFGLA------------------------IEVQGEQQA---W-FG 151
L ++ ++++ DFG A +E QG A W G
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLG 207
Query: 152 VILYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
V+LY L GY PF D+ + A+I +G + W++V+ AK+L+++ L V+P
Sbjct: 208 VLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPH 267
Query: 209 KRITASEALKHPWI 222
+R+TA+ L+HPWI
Sbjct: 268 QRLTAALVLRHPWI 281
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQHRLYAQIKAGAY 315
T +++PEVL+++ Y DIW+ GV+LY L GY PF D+ + A+I +G +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKF 240
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 154 bits (390), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 136/250 (54%), Gaps = 31/250 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF VV RCV+KATG F AK INT D ++ E I +L HP ++ LHD+ ++
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTP--YPLDKYTVKNEISIMNQLHHPKLINLHDAFED 119
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ L+ + ++GGELF+ I A ++ SEA+ + ++Q E + H H + +VH D+KPEN
Sbjct: 120 KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN 179
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQ--------------------------QAW-FGV 152
++ +K K ++VK+ DFGLA ++ ++ W GV
Sbjct: 180 IMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
+ Y+LL G PF ED +K +++ + +V+PEAK+ I +L P KR+T
Sbjct: 239 LGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT 298
Query: 213 ASEALKHPWI 222
+AL+HPW+
Sbjct: 299 VHDALEHPWL 308
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 11/92 (11%)
Query: 222 ICQRERVASIVHRQETVD--CLKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPV 279
+C+ ++ +S+ + +D K N +KV+T T + +PE++ +EP G
Sbjct: 181 MCETKKASSV----KIIDFGLATKLNPDEIVKVTT-----ATAEFAAPEIVDREPVGFYT 231
Query: 280 DIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
D+WA GV+ Y+LL G PF ED +K
Sbjct: 232 DMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 263
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 143/265 (53%), Gaps = 39/265 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+FS+ R+CV K + FA KII +K++ A + QK ++C HPNIV+LH+ +
Sbjct: 22 GSFSICRKCVHKKSNQAFAVKII-SKRMEA-NTQKEITALKLCEG--HPNIVKLHEVFHD 77
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +LV +L+ GGELFE I ++ +SE +AS+ +++++ +V+H H GVVHRDLKPENL
Sbjct: 78 QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENL 137
Query: 121 LLASKAKGAAVKLADFGLA------------------------IEVQGEQQA---W-FGV 152
L + +K+ DFG A + G ++ W GV
Sbjct: 138 LFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGV 197
Query: 153 ILYILLVGYPPFWDEDQH-------RLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTV 205
ILY +L G PF D+ + +IK G + + W V+ EAK+LI +LTV
Sbjct: 198 ILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTV 257
Query: 206 NPSKRITASEALKHPWICQRERVAS 230
+P+KR+ S + W+ +++S
Sbjct: 258 DPNKRLKMSGLRYNEWLQDGSQLSS 282
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
T Y +PE+L + Y + D+W+ GVILY +L G PF D+
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDR 214
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 151 bits (381), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 32/272 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC 240
KR+T ++L+HPWI ++ ++ + V+
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNM 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 32/272 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC 240
KR+T ++L+HPWI ++ ++ + V+
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNM 293
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 32/272 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC 240
KR+T ++L+HPWI ++ ++ + V+
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNM 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 144/272 (52%), Gaps = 32/272 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWICQRERVASIVHRQETVDC 240
KR+T ++L+HPWI ++ ++ + V+
Sbjct: 262 KRMTIQDSLQHPWIKPKDTQQALSRKASAVNM 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 138/254 (54%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLA--IEVQGEQQAWF----------------------- 150
PEN++L + +K+ DFGLA I+ E + F
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 151 --GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 150 bits (379), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 140
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 201 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 260
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 261 KRMTIQDSLQHPWI 274
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 320 KHKSAS 325
++ S +
Sbjct: 238 EYFSNT 243
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 21 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 80
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 81 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 140
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 141 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 200
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 201 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 260
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 261 KRMTIQDSLQHPWI 274
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 178 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 237
Query: 320 KHKSAS 325
++ S +
Sbjct: 238 EYFSNT 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK--KLSARDFQK--LEREARICRKLQHPNIVRLHD 56
G F+VV++C +K+TGL++AAK I + K S R + +ERE I +++QHPN++ LH+
Sbjct: 22 GQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + L+ +LV GGELF+ + +E +E +A+ ++QIL V + HS + H DLK
Sbjct: 82 VYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 117 PENLLLASK-AKGAAVKLADFGLAIEVQG--------------------------EQQAW 149
PEN++L + +K+ DFGLA ++ E W
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMW 201
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
GVI YILL G PF + + A + A Y++ + + AK+ I ++L +P
Sbjct: 202 SIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPK 261
Query: 209 KRITASEALKHPWI 222
KR+T ++L+HPWI
Sbjct: 262 KRMTIQDSLQHPWI 275
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDDEP 319
GTP +++PE++ EP G D+W+ GVI YILL G PF + + A + A Y+ E
Sbjct: 179 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFED 238
Query: 320 KHKSAS 325
++ S +
Sbjct: 239 EYFSNT 244
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 133/246 (54%), Gaps = 26/246 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 29 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 80
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ-----QAW-FGVILYILLVGYPPFWD 166
RD+KPENLL SK A +KL DFG A E GE+ W GVI+YILL GYPPF+
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYS 200
Query: 167 ED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ +I+ G Y++P+PEW V+ E K LI +L P++R+T +E + HPWI
Sbjct: 201 NHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
Query: 223 CQRERV 228
Q +V
Sbjct: 261 MQSTKV 266
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 273 EPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 147 bits (370), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A KII+ +K SAR+ +E E I +KL HP I+++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 80
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 81 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 139
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------LAIEV------QGEQQA 148
LKPEN+LL+S+ + +K+ DFG LA EV G +A
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 199
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A KII+ +K SAR+ +E E I +KL HP I+++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 80
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 81 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 139
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------LAIEV------QGEQQA 148
LKPEN+LL+S+ + +K+ DFG LA EV G +A
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 199
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A KII+ +K SAR+ +E E I +KL HP I+++
Sbjct: 20 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 79
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 80 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 138
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------LAIEV------QGEQQA 148
LKPEN+LL+S+ + +K+ DFG LA EV G +A
Sbjct: 139 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 198
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 199 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 258
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 259 VVDPKARFTTEEALRHPWL 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 152 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 211
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 212 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 241
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A KII+ +K SAR+ +E E I +KL HP I+++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 80
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 81 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 139
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------LAIEV------QGEQQA 148
LKPEN+LL+S+ + +K+ DFG LA EV G +A
Sbjct: 140 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 199
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 200 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 259
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 260 VVDPKARFTTEEALRHPWL 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 242
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 139/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A KII+ +K SAR+ +E E I +KL HP I+++
Sbjct: 27 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 86
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 87 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 145
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------LAIEV------QGEQQA 148
LKPEN+LL+S+ + +K+ DFG LA EV G +A
Sbjct: 146 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 205
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 206 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 265
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 266 VVDPKARFTTEEALRHPWL 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 159 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 218
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 219 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 248
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 138/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A +II+ +K SAR+ +E E I +KL HP I+++
Sbjct: 160 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 219
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 220 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 278
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------------LAIEVQGEQQA 148
LKPEN+LL+S+ + +K+ DFG +++ G +A
Sbjct: 279 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 338
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 339 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 398
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 399 VVDPKARFTTEEALRHPWL 417
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 292 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 351
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 352 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 381
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 138/259 (53%), Gaps = 38/259 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQ---KLEREARICRKLQHPNIVRL 54
GA V+ ++ T + A +II+ +K SAR+ +E E I +KL HP I+++
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI 205
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
+ E+Y Y+V +L+ GGELF+ +V + EA Q+L +V + H NG++HRD
Sbjct: 206 KNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRD 264
Query: 115 LKPENLLLASKAKGAAVKLADFG--------------------------LAIEVQGEQQA 148
LKPEN+LL+S+ + +K+ DFG +++ G +A
Sbjct: 265 LKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRA 324
Query: 149 ---W-FGVILYILLVGYPPFWD-EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
W GVIL+I L GYPPF + Q L QI +G Y++ W V+ +A +L+ ++L
Sbjct: 325 VDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLL 384
Query: 204 TVNPSKRITASEALKHPWI 222
V+P R T EAL+HPW+
Sbjct: 385 VVDPKARFTTEEALRHPWL 403
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 239 DCLKKFNARRKLKV----STRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYIL 291
DCL K K+ S + GTP YL+PEVL Y + VD W+ GVIL+I
Sbjct: 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337
Query: 292 LVGYPPFWD-EDQHRLYAQIKAGAYDDEPK 320
L GYPPF + Q L QI +G Y+ P+
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPE 367
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 128/250 (51%), Gaps = 37/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G+F V+ TG + A KIIN K L+ D Q ++ERE R L+HP+I++L+D I+
Sbjct: 25 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 84
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +V + G ELF+ IV R+ SE +A QQI+ +V +CH + +VHRDLKPEN
Sbjct: 85 SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLA-IEVQG--------------------------EQQAWF-G 151
LLL VK+ADFGL+ I G E W G
Sbjct: 144 LLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 200
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY++L PF DE L+ I G Y P ++P A LI +ML VNP RI
Sbjct: 201 VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRI 256
Query: 212 TASEALKHPW 221
+ E ++ W
Sbjct: 257 SIHEIMQDDW 266
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ + Y P VD+W+CGVILY++L PF DE L+ I G Y
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 230
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 132/251 (52%), Gaps = 31/251 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V +C + ATGL+ AAKII T+ + +D ++++ E + +L H N+++L+D+ +
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFES 157
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+N LV + V GGELF+ I+ + +E D ++QI E + H H ++H DLKPEN
Sbjct: 158 KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPEN 217
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ--------------------------AW-FGV 152
+L ++ +K+ DFGLA + ++ W GV
Sbjct: 218 ILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGV 276
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
I Y+LL G PF ++ I A +D E+ ++ EAK I+++L S RI+
Sbjct: 277 IAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS 336
Query: 213 ASEALKHPWIC 223
ASEALKHPW+
Sbjct: 337 ASEALKHPWLS 347
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 242 KKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
+++ R KLKV+ GTP +L+PEV+ + P D+W+ GVI Y+LL G PF +
Sbjct: 237 RRYKPREKLKVNF-----GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291
Query: 302 DQHRLYAQIKAGAYDDE 318
+ I A +D E
Sbjct: 292 NDAETLNNILACRWDLE 308
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 128/250 (51%), Gaps = 37/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G+F V+ TG + A KIIN K L+ D Q ++ERE R L+HP+I++L+D I+
Sbjct: 24 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +V + G ELF+ IV R+ SE +A QQI+ +V +CH + +VHRDLKPEN
Sbjct: 84 SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN 142
Query: 120 LLLASKAKGAAVKLADFGLA-IEVQG--------------------------EQQAW-FG 151
LLL VK+ADFGL+ I G E W G
Sbjct: 143 LLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 199
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY++L PF DE L+ I G Y P ++P A LI +ML VNP RI
Sbjct: 200 VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRI 255
Query: 212 TASEALKHPW 221
+ E ++ W
Sbjct: 256 SIHEIMQDDW 265
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ + Y P VD+W+CGVILY++L PF DE L+ I G Y
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 229
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 128/250 (51%), Gaps = 37/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G+F V+ TG + A KIIN K L+ D Q ++ERE R L+HP+I++L+D I+
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +V + G ELF+ IV R+ SE +A QQI+ +V +CH + +VHRDLKPEN
Sbjct: 75 SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN 133
Query: 120 LLLASKAKGAAVKLADFGLA-IEVQG--------------------------EQQAW-FG 151
LLL VK+ADFGL+ I G E W G
Sbjct: 134 LLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 190
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY++L PF DE L+ I G Y P ++P A LI +ML VNP RI
Sbjct: 191 VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRI 246
Query: 212 TASEALKHPW 221
+ E ++ W
Sbjct: 247 SIHEIMQDDW 256
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ + Y P VD+W+CGVILY++L PF DE L+ I G Y
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 139 bits (350), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 128/250 (51%), Gaps = 37/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G+F V+ TG + A KIIN K L+ D Q ++ERE R L+HP+I++L+D I+
Sbjct: 19 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ +V + G ELF+ IV R+ SE +A QQI+ +V +CH + +VHRDLKPEN
Sbjct: 79 SKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN 137
Query: 120 LLLASKAKGAAVKLADFGLA-IEVQG--------------------------EQQAW-FG 151
LLL VK+ADFGL+ I G E W G
Sbjct: 138 LLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCG 194
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY++L PF DE L+ I G Y P ++P A LI +ML VNP RI
Sbjct: 195 VILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRI 250
Query: 212 TASEALKHPW 221
+ E ++ W
Sbjct: 251 SIHEIMQDDW 260
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ + Y P VD+W+CGVILY++L PF DE L+ I G Y
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 129/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 18 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 77
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA + E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 78 EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 137
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 138 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 195 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 250
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 251 LEQIMKDRWM 260
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 165 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 129/251 (51%), Gaps = 31/251 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF VV R ++ATG FAAK + T S D + + +E + L+HP +V LHD+ ++
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAFED 119
Query: 61 ENYHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+N ++++ ++GGELFE + SE +A ++Q+ + + H H N VH DLKPEN
Sbjct: 120 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 179
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA--------------------------W-FGV 152
++ +K + +KL DFGL + +Q W GV
Sbjct: 180 IMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 238
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
+ YILL G PF E+ +K+ ++ + ++ + K+ I ++L +P+ R+T
Sbjct: 239 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 298
Query: 213 ASEALKHPWIC 223
+AL+HPW+
Sbjct: 299 IHQALEHPWLT 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
+ ++ +KV+T GT + +PEV + +P G D+W+ GV+ YILL G PF E+
Sbjct: 201 LDPKQSVKVTT-----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
Query: 304 HRLYAQIKA 312
+K+
Sbjct: 256 DETLRNVKS 264
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 129/251 (51%), Gaps = 31/251 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF VV R ++ATG FAAK + T S D + + +E + L+HP +V LHD+ ++
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHES--DKETVRKEIQTMSVLRHPTLVNLHDAFED 225
Query: 61 ENYHYLVFDLVTGGELFEDIV-AREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+N ++++ ++GGELFE + SE +A ++Q+ + + H H N VH DLKPEN
Sbjct: 226 DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 285
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA--------------------------W-FGV 152
++ +K + +KL DFGL + +Q W GV
Sbjct: 286 IMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGV 344
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
+ YILL G PF E+ +K+ ++ + ++ + K+ I ++L +P+ R+T
Sbjct: 345 LSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 404
Query: 213 ASEALKHPWIC 223
+AL+HPW+
Sbjct: 405 IHQALEHPWLT 415
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
+ ++ +KV+T GT + +PEV + +P G D+W+ GV+ YILL G PF E+
Sbjct: 307 LDPKQSVKVTT-----GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 361
Query: 304 HRLYAQIKA 312
+K+
Sbjct: 362 DETLRNVKS 370
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 128/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 258 LEQIMKDRWM 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 128/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 258 LEQIMKDRWM 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 128/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 258 LEQIMKDRWM 267
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A +II+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 258 LEQIMKDRWM 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 128/250 (51%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A +II+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADMN---IKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPWI 222
+ +K W+
Sbjct: 258 LEQIMKDRWM 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 73 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 124
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 125 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 184
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 304
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 305 LLKTEPTQRMTITEFMNHPWIMQSTKV 331
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 126/250 (50%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L+ QKL RE RI + L HPNIV+L + I+
Sbjct: 23 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 82
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YL+ + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 83 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 143 LLDADMN---IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 199
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NP KR T
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT 255
Query: 213 ASEALKHPWI 222
+ +K WI
Sbjct: 256 LEQIMKDRWI 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 228
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 29 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 80
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTKV 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW 299
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 79 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 130
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 131 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 190
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 191 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 310
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 311 LLKTEPTQRMTITEFMNHPWIMQSTKV 337
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 291
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 35 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 86
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 87 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 146
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 147 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 266
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 267 LLKTEPTQRMTITEFMNHPWIMQSTKV 293
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 247
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 127/250 (50%), Gaps = 35/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L+ QKL RE RI + L HPNIV+L + I+
Sbjct: 26 GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 85
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YL+ + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 86 EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 121 LLASKAKGAAVKLADFGLAIE--VQGEQQAW--------------------------FGV 152
LL + +K+ADFG + E V G+ A+ GV
Sbjct: 146 LLDADMN---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ + L +NP KR T
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT 258
Query: 213 ASEALKHPWI 222
+ +K WI
Sbjct: 259 LEQIMKDRWI 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 29 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 80
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 81 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 140
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 141 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 260
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTKV 287
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 30/39 (76%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW 299
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY 220
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 43 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 94
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 95 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 154
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 155 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 274
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 275 LLKTEPTQRMTITEFMNHPWIMQSTKV 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 255
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 27 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 78
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTKV 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 34 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 85
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 86 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 145
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 146 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 265
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 266 LLKTEPTQRMTITEFMNHPWIMQSTKV 292
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 246
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 28 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 79
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 80 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 139
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 140 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 259
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 260 LLKTEPTQRMTITEFMNHPWIMQSTKV 286
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 181 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 240
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 33 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 84
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 85 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 144
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 145 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 264
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 265 LLKTEPTQRMTITEFMNHPWIMQSTKV 291
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 245
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 130/267 (48%), Gaps = 47/267 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K++ +D K RE + R Q P+IVR+ D +
Sbjct: 27 GINGKVLQIFNKRTQEKFALKML-------QDCPKARREVELHWRASQCPHIVRIVD-VY 78
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS ++ I E++ + HS + H
Sbjct: 79 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAH 138
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 139 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 148 -AW-FGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
W GVI+YILL GYPPF+ + +I+ G Y++P+PEW V+ E K LI
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 258
Query: 202 MLTVNPSKRITASEALKHPWICQRERV 228
+L P++R+T +E + HPWI Q +V
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTKV 285
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYD 316
TP Y++PEVL E Y K D+W+ GVI+YILL GYPPF+ + +I+ G Y+
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE 239
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 38/254 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG A KI++ L + D +++ E + L+H +I +L+ ++
Sbjct: 21 GGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLET 79
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N ++V + GGELF+ I++++ SE + +QI+ +V + HS G HRDLKPENL
Sbjct: 80 ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENL 139
Query: 121 LLASKAKGAAVKLADFGLAIEVQG-----------------------------EQQAW-F 150
L K +KL DFGL + +G E W
Sbjct: 140 LFDEYHK---LKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSM 196
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G++LY+L+ G+ PF D++ LY +I G YD P+W ++P + L+ QML V+P KR
Sbjct: 197 GILLYVLMCGFLPFDDDNVMALYKKIMRGKYD--VPKW--LSPSSILLLQQMLQVDPKKR 252
Query: 211 ITASEALKHPWICQ 224
I+ L HPWI Q
Sbjct: 253 ISMKNLLNHPWIMQ 266
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 256 QGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
Q G+ Y +PE+++ + Y G D+W+ G++LY+L+ G+ PF D++ LY +I G
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK 226
Query: 315 YDDEPKHKSASVV 327
Y D PK S S +
Sbjct: 227 Y-DVPKWLSPSSI 238
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 125/249 (50%), Gaps = 35/249 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L++ QKL RE RI + L HPNIV+L + I+
Sbjct: 25 GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIET 84
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 85 EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL + +K+ADFG + E QG E W GV
Sbjct: 145 LLDADXN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P + + +NL+ + L +NPSKR T
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKFLILNPSKRGT 257
Query: 213 ASEALKHPW 221
+ K W
Sbjct: 258 LEQIXKDRW 266
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 141/278 (50%), Gaps = 58/278 (20%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 59
GA++ V+ V G E+A KII + +R ++ RE + Q + NI+ L + +
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR--SRVFREVETLYQCQGNKNILELIEFFE 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ YLVF+ + GG + I ++ ++E +AS ++ + +++ H+ G+ HRDLKPEN
Sbjct: 82 DDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLA-------------------------------IEVQGEQQA 148
+L S K + VK+ DF L +EV +Q
Sbjct: 142 ILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQAT 201
Query: 149 WF---------GVILYILLVGYPPF---------WDED------QHRLYAQIKAGAYDYP 184
++ GV+LYI+L GYPPF WD Q++L+ I+ G Y++P
Sbjct: 202 FYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFP 261
Query: 185 SPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+W ++ EAK+LI+++L + +R++A++ L+HPW+
Sbjct: 262 DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 20/78 (25%)
Query: 259 AGTPGYLSPEVL-----KKEPYGKPVDIWACGVILYILLVGYPPF---------WDED-- 302
G+ Y++PEV+ + Y K D+W+ GV+LYI+L GYPPF WD
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEV 241
Query: 303 ----QHRLYAQIKAGAYD 316
Q++L+ I+ G Y+
Sbjct: 242 CRVCQNKLFESIQEGKYE 259
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 37/260 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F+ V R TGLE A K+I+ K + A Q+++ E +I +L+HP+I+ L++ +
Sbjct: 22 GSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ NY YLV ++ GE+ + R + +SE +A H + QI+ + + HS+G++HRDL
Sbjct: 82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLS 141
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQG---------------------------EQQAW-F 150
NLLL + +K+ADFGLA +++ E W
Sbjct: 142 NLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G + Y LL+G PPF + ++ Y+ PS ++ EAK+LI+Q+L NP+ R
Sbjct: 199 GCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIEAKDLIHQLLRRNPADR 254
Query: 211 ITASEALKHPWICQRERVAS 230
++ S L HP++ + S
Sbjct: 255 LSLSSVLDHPFMSRNSSTKS 274
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
GTP Y+SPE+ + +G D+W+ G + Y LL+G PPF
Sbjct: 172 LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/269 (34%), Positives = 126/269 (46%), Gaps = 51/269 (18%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARI-CRKLQHPNIVRLHDSIQ 59
G V + K T +FA K + +D K RE + R Q P+IVR+ D +
Sbjct: 73 GINGKVLQIFNKRTQEKFALKXL-------QDCPKARREVELHWRASQCPHIVRIVD-VY 124
Query: 60 EENYH-----YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
E Y +V + + GGELF I R + ++E +AS + I E++ + HS + H
Sbjct: 125 ENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAH 184
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ------------------------- 147
RD+KPENLL SK A +KL DFG A E
Sbjct: 185 RDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 148 -AW-FGVILYILLVGYPPFWDEDQHRL------YAQIKAGAYDYPSPEWDTVTPEAKNLI 199
W GVI YILL GYPPF+ H L +I+ G Y++P+PEW V+ E K LI
Sbjct: 245 DXWSLGVIXYILLCGYPPFYS--NHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLI 302
Query: 200 NQMLTVNPSKRITASEALKHPWICQRERV 228
+L P++R T +E HPWI Q +V
Sbjct: 303 RNLLKTEPTQRXTITEFXNHPWIXQSTKV 331
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 28/39 (71%)
Query: 261 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW 299
TP Y++PEVL E Y K D W+ GVI YILL GYPPF+
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFY 264
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 138/278 (49%), Gaps = 58/278 (20%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 59
GA + V+ C+ T E+A KII + R ++ RE + + Q H N++ L + +
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQGHRNVLELIEFFE 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EE+ YLVF+ + GG + I R ++E +AS +Q + +++ H+ G+ HRDLKPEN
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLA-------------------------------IEVQGEQQA 148
+L + + VK+ DFGL +E E+ +
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 149 WF---------GVILYILLVGYPPF---------WDED------QHRLYAQIKAGAYDYP 184
+ GVILYILL GYPPF WD Q+ L+ I+ G Y++P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261
Query: 185 SPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+W ++ AK+LI+++L + +R++A++ L+HPW+
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 20/78 (25%)
Query: 259 AGTPGYLSPEVLKK-----EPYGKPVDIWACGVILYILLVGYPPF---------WDED-- 302
G+ Y++PEV++ Y K D+W+ GVILYILL GYPPF WD
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 303 ----QHRLYAQIKAGAYD 316
Q+ L+ I+ G Y+
Sbjct: 242 CPACQNMLFESIQEGKYE 259
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRLHDSIQ 59
G F V+ + TG + A KI+N +K+ + D K++RE + + +HP+I++L+ I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++V + V+GGELF+ I E +A QQIL +V++CH + VVHRDLKPEN
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLA---------------------------IEVQGEQQAW-FG 151
+LL + K+ADFGL+ + E W G
Sbjct: 142 VLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCG 198
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY LL G PF DE L+ +I+ G + P + + L+ ML V+P KR
Sbjct: 199 VILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLMHMLQVDPLKRA 254
Query: 212 TASEALKHPWICQ 224
T + +H W Q
Sbjct: 255 TIKDIREHEWFKQ 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ Y P VDIW+CGVILY LL G PF DE L+ +I+ G +
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRLHDSIQ 59
G F V+ + TG + A KI+N +K+ + D K++RE + + +HP+I++L+ I
Sbjct: 22 GTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++V + V+GGELF+ I E +A QQIL +V++CH + VVHRDLKPEN
Sbjct: 82 TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLA---------------------------IEVQGEQQAW-FG 151
+LL + K+ADFGL+ + E W G
Sbjct: 142 VLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCG 198
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY LL G PF DE L+ +I+ G + P + + L+ ML V+P KR
Sbjct: 199 VILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLMHMLQVDPLKRA 254
Query: 212 TASEALKHPWICQ 224
T + +H W Q
Sbjct: 255 TIKDIREHEWFKQ 267
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ Y P VDIW+CGVILY LL G PF DE L+ +I+ G +
Sbjct: 171 CGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF 228
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 37/250 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G+F V+ T + A K I+ + L D ++ERE + L+HP+I++L+D I
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+V + GGELF+ IV ++ +E + QQI+ ++ +CH + +VHRDLKPEN
Sbjct: 80 TPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLA-IEVQG--------------------------EQQAWF-G 151
LLL VK+ADFGL+ I G E W G
Sbjct: 139 LLLDDNLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCG 195
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
++LY++LVG PF DE L+ ++ + Y P D ++P A++LI +M+ +P +RI
Sbjct: 196 IVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRRMIVADPMQRI 251
Query: 212 TASEALKHPW 221
T E + PW
Sbjct: 252 TIQEIRRDPW 261
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 260 GTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
G+P Y +PEV+ + Y P VD+W+CG++LY++LVG PF DE L+ ++ + Y
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVY 225
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 31/267 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQ 59
G F+VVR+C+ K+TG E+AAK + ++ ++ E + + P ++ LH+ +
Sbjct: 40 GKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99
Query: 60 EENYHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
+ L+ + GGE+F + E SE D I+QILE V + H N +VH DLKP
Sbjct: 100 NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKP 159
Query: 118 ENLLLASKAKGAAVKLADFGLA---------IEVQGEQQ-----------------AW-F 150
+N+LL+S +K+ DFG++ E+ G + W
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G+I Y+LL PF ED Y I DY + +V+ A + I +L NP KR
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279
Query: 211 ITASEALKHPWICQRERVASIVHRQET 237
TA L H W+ Q+ ++ H +ET
Sbjct: 280 PTAEICLSHSWL-QQWDFENLFHPEET 305
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
GTP YL+PE+L +P D+W G+I Y+LL PF ED Y I D
Sbjct: 195 GTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVD 251
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 46/262 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G V C + TG + A K++ S + Q+++ + P+IV + D
Sbjct: 40 GVNGKVLECFHRRTGQKCALKLLYD---SPKARQEVDHHWQASGG---PHIVCILDVY-- 91
Query: 61 ENYHY------LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
EN H+ ++ + + GGELF I R + ++E +A+ ++ I ++ HS+ + H
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 151
Query: 113 RDLKPENLLLASKAKGAAVKLADFG-------------------LAIEVQGEQQ------ 147
RD+KPENLL SK K A +KL DFG +A EV G ++
Sbjct: 152 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 148 AW-FGVILYILLVGYPPFWDEDQHRLYA----QIKAGAYDYPSPEWDTVTPEAKNLINQM 202
W GVI+YILL G+PPF+ + +I+ G Y +P+PEW V+ +AK LI +
Sbjct: 212 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 271
Query: 203 LTVNPSKRITASEALKHPWICQ 224
L +P++R+T ++ + HPWI Q
Sbjct: 272 LKTDPTERLTITQFMNHPWINQ 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW 299
L F ++ + Q TP Y++PEVL E Y K D+W+ GVI+YILL G+PPF+
Sbjct: 172 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 133/262 (50%), Gaps = 46/262 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G V C + TG + A K++ S + Q+++ + P+IV + D
Sbjct: 21 GVNGKVLECFHRRTGQKCALKLLYD---SPKARQEVDHHWQASGG---PHIVCILDVY-- 72
Query: 61 ENYHY------LVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVH 112
EN H+ ++ + + GGELF I R + ++E +A+ ++ I ++ HS+ + H
Sbjct: 73 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAH 132
Query: 113 RDLKPENLLLASKAKGAAVKLADFG-------------------LAIEVQGEQQ------ 147
RD+KPENLL SK K A +KL DFG +A EV G ++
Sbjct: 133 RDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 148 AW-FGVILYILLVGYPPFWDEDQHRLYA----QIKAGAYDYPSPEWDTVTPEAKNLINQM 202
W GVI+YILL G+PPF+ + +I+ G Y +P+PEW V+ +AK LI +
Sbjct: 193 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLL 252
Query: 203 LTVNPSKRITASEALKHPWICQ 224
L +P++R+T ++ + HPWI Q
Sbjct: 253 LKTDPTERLTITQFMNHPWINQ 274
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW 299
L F ++ + Q TP Y++PEVL E Y K D+W+ GVI+YILL G+PPF+
Sbjct: 153 LTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 211
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 142/291 (48%), Gaps = 46/291 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F+ V+ TG E A KII+ +L+ QKL RE RI + L HPNIV+L + I+
Sbjct: 26 GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET 85
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YLV + +GGE+F+ +VA E +A +QI+ +V +CH +VHRDLK ENL
Sbjct: 86 EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENL 145
Query: 121 LLASKAKGAAVKLADFGLAIE---------------------VQG------EQQAW-FGV 152
LL +K+ADFG + E QG E W GV
Sbjct: 146 LLDGDMN---IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 202
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
ILY L+ G PF ++ L ++ G Y P ++ + +NL+ ++L +NP KR +
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKLLVLNPIKRGS 258
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKK----FNARRKLKVSTRQGFA 259
+ +K W+ ++ H +E + + FN +++ + GFA
Sbjct: 259 LEQIMKDRWM-------NVGHEEEELKPYTEPDPDFNDTKRIDIMVTMGFA 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F G+P Y +PE+ + + Y P VD+W+ GVILY L+ G PF ++ L ++ G Y
Sbjct: 173 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 137/278 (49%), Gaps = 58/278 (20%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 59
GA + V+ C+ T E+A KII + R ++ RE + + Q H N++ L + +
Sbjct: 24 GAHARVQTCINLITSQEYAVKIIEKQPGHIR--SRVFREVEMLYQCQGHRNVLELIEFFE 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EE+ YLVF+ + GG + I R ++E +AS +Q + +++ H+ G+ HRDLKPEN
Sbjct: 82 EEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN 141
Query: 120 LLLASKAKGAAVKLADF--GLAIEVQGEQQA----------------------------- 148
+L + + VK+ DF G I++ G+
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 149 --------W-FGVILYILLVGYPPF---------WDED------QHRLYAQIKAGAYDYP 184
W GVILYILL GYPPF WD Q+ L+ I+ G Y++P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFP 261
Query: 185 SPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+W ++ AK+LI+++L + +R++A++ L+HPW+
Sbjct: 262 DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 20/78 (25%)
Query: 259 AGTPGYLSPEVLKK-----EPYGKPVDIWACGVILYILLVGYPPF---------WDED-- 302
G+ Y++PEV++ Y K D+W+ GVILYILL GYPPF WD
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 303 ----QHRLYAQIKAGAYD 316
Q+ L+ I+ G Y+
Sbjct: 242 CPACQNMLFESIQEGKYE 259
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 36/253 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRLHDSIQ 59
G F V+ + TG + A KI+N +K+ + D K+ RE + + +HP+I++L+ I
Sbjct: 27 GTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++V + V+GGELF+ I E ++ QQIL V++CH + VVHRDLKPEN
Sbjct: 87 TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPEN 146
Query: 120 LLLASKAKGAAVKLADFGLAIEVQG---------------------------EQQAW-FG 151
+LL + K+ADFGL+ + E W G
Sbjct: 147 VLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSG 203
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
VILY LL G PF D+ L+ +I G + P + P +L+ ML V+P KR
Sbjct: 204 VILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLKHMLQVDPMKRA 259
Query: 212 TASEALKHPWICQ 224
T + +H W Q
Sbjct: 260 TIKDIREHEWFKQ 272
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDD 317
G+P Y +PEV+ Y P VDIW+ GVILY LL G PF D+ L+ +I G +
Sbjct: 176 CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF-Y 234
Query: 318 EPKHKSASVV 327
P++ + SV+
Sbjct: 235 TPQYLNPSVI 244
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 32/254 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V ++++GLE K IN K S +++E E + + L HPNI+++ + ++
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTIN-KDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFED 91
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF----YSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ Y+V + GGEL E IV+ + SE + ++Q++ ++ + HS VVH+DLK
Sbjct: 92 YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLK 151
Query: 117 PENLLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------WF- 150
PEN+L + + +K+ DFGLA + ++ + W
Sbjct: 152 PENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSA 211
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV++Y LL G PF + + +Y + E +TP+A +L+ QMLT +P +R
Sbjct: 212 GVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNY-AVECRPLTPQAVDLLKQMLTKDPERR 270
Query: 211 ITASEALKHPWICQ 224
+A++ L H W Q
Sbjct: 271 PSAAQVLHHEWFKQ 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
AGT Y++PEV K++ K DIW+ GV++Y LL G PF
Sbjct: 187 AGTALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTGCLPF 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 118 bits (295), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GE+++++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 144 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 256
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 257 REVLEHPWITANSSKPSNCQNKESAS 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GE+++++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 84 DATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 144 LLLGS---AGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 256
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 257 REVLEHPWITANSSKPSNCQNKESAS 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 166 SRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S + +K+ADFG ++ ++A W GV+
Sbjct: 142 LLLGSAGE---LKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 255 REVLEHPWITANSSKPSNCQNKESAS 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++A W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 252 REVLEHPWIT 261
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++A W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 252 REVLEHPWIT 261
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 120/249 (48%), Gaps = 34/249 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V ++ + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S + +K+ADFG ++ ++ W GV+
Sbjct: 143 LLLGSNGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L N S+R+T
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRLLKHNASQRLTL 255
Query: 214 SEALKHPWI 222
+E L+HPWI
Sbjct: 256 AEVLEHPWI 264
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 130/263 (49%), Gaps = 33/263 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F +V RCV+ ++ + AK + K+ D +++E I +H NI+ LH+S +
Sbjct: 16 GEFGIVHRCVETSSKKTYMAKFV---KVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++F+ ++G ++FE I F +E + + Q+ E++ HS+ + H D++PEN
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN 132
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------------VQGEQQAW-FGV 152
++ ++ + + +K+ +FG A + V W G
Sbjct: 133 IIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGT 191
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
++Y+LL G PF E ++ I Y + + ++ EA + ++++L R+T
Sbjct: 192 LVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT 251
Query: 213 ASEALKHPWICQR-ERVASIVHR 234
ASEAL+HPW+ Q+ ERV++ V R
Sbjct: 252 ASEALQHPWLKQKIERVSTKVIR 274
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 262 PGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD-DEPK 320
P Y +PEV + + D+W+ G ++Y+LL G PF E ++ I Y DE
Sbjct: 167 PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEA 226
Query: 321 HKSASV 326
K S+
Sbjct: 227 FKEISI 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 121/249 (48%), Gaps = 34/249 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V ++ + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------VQGEQQ-----AW-FGVI 153
LLL S + +K+ADFG ++ ++G W GV+
Sbjct: 143 LLLGSNGE---LKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L N S+R+T
Sbjct: 200 CYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRLLKHNASQRLTL 255
Query: 214 SEALKHPWI 222
+E L+HPWI
Sbjct: 256 AEVLEHPWI 264
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 165 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRI 222
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 144 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 256
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 257 REVLEHPWITANSSKPSNCQNKESAS 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 166 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 140 LLLGS---AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 252
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 253 REVLEHPWITANSSKPSNCQNKESAS 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 162 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 142 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 255 REVLEHPWITANSSKPSNCQNKESAS 280
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 82
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 83 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 142
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S + +K+ADFG ++ ++ W GV+
Sbjct: 143 LLLGSAGE---LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 200 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 255
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 256 REVLEHPWIT 265
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 165 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 144 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVL 200
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPXL 256
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 257 REVLEHPWITANSSKPSNCQNKESAS 282
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE ++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 166 SRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 138/301 (45%), Gaps = 78/301 (25%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL---SARDFQKLEREARICRKLQHPNIVRLHDS 57
G++ VVR ++ T A KI+N K+ + +D ++++ E R+ +KL HPNI RL++
Sbjct: 37 GSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEV 96
Query: 58 IQEENYHYLVFDLVTGGELFE---------------DIVARE------------------ 84
++E Y LV +L GG L + D+V +
Sbjct: 97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHG 156
Query: 85 FYSEAD-------ASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG 137
F D S+ ++QI ++++ H+ G+ HRD+KPEN L ++ K +KL DFG
Sbjct: 157 FRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFG 215
Query: 138 LAIEV----QGEQ-----------------------------QAWF-GVILYILLVGYPP 163
L+ E GE AW GV+L++LL+G P
Sbjct: 216 LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
Query: 164 FWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWIC 223
F + +Q+ + +P ++ ++P A++L++ +L N +R A AL+HPWI
Sbjct: 276 FPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335
Query: 224 Q 224
Q
Sbjct: 336 Q 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 259 AGTPGYLSPEVLK--KEPYGKPVDIWACGVILYILLVGYPPF 298
AGTP +++PEVL E YG D W+ GV+L++LL+G PF
Sbjct: 235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 252 REVLEHPWITANSSKPSNCQNKESAS 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 165 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 277
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 278 REVLEHPWITANSSKPSNCQNKESAS 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 187 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 252 REVLEHPWITANSSKPSNCQNKESAS 277
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWICQRERVASIVHRQET 237
E L+HPWI S +E+
Sbjct: 252 REVLEHPWITANSSKPSNCQNKES 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 142 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 255 REVLEHPWIT 264
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 83
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 84 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 143
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 144 LLLGS---AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 256
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 257 REVLEHPWITANSSKPSNCQNKESAS 282
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 166 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 36 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 95
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 96 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 155
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 156 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 212
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 213 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 268
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 269 REVLEHPWITANSSKPSNCQNKESAS 294
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 178 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 235
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 141 LLLGS---AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 253
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 254 REVLEHPWITANSSKPSNCQNKESAS 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 163 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 34/264 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWICQRERVASIVHRQET 237
E L+HPWI S +E+
Sbjct: 252 REVLEHPWITANSSKPSNCQNKES 275
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 252 REVLEHPWIT 261
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 114 bits (286), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 77
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 78 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 137
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 138 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 194
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 195 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 250
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 251 REVLEHPWIT 260
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 160 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------------------------AW-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 140 LLLGS---AGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 252
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 253 REVLEHPWITANSSKPSNCQNKESAS 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 162 SRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 79 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 139 LLLGS---AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 251
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 252 REVLEHPWIT 261
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 161 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 142 LLLGS---AGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 255 REVLEHPWIT 264
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 34/265 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 104
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 105 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 164
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------------------------AW-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 165 LLLGS---AGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 222 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 277
Query: 214 SEALKHPWICQRERVASIVHRQETV 238
E L+HPWI S +E+
Sbjct: 278 REVLEHPWITANSSKPSNCQNKESA 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 187 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 244
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQ-------------------------AW-FGVI 153
LLL S + +K+ADFG ++ ++ W GV+
Sbjct: 142 LLLGSAGE---LKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 255 REVLEHPWIT 264
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 76 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 135
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG ++ ++ W GV+
Sbjct: 136 LLLGS---AGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 192
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 193 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 248
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 249 REVLEHPWIT 258
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 158 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 80
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 81 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 140
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+A+FG ++ ++ W GV+
Sbjct: 141 LLLGS---AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 198 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 253
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 254 REVLEHPWITANSSKPSNCQNKESAS 279
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 163 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 34/266 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 80 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+ADFG + ++ W GV+
Sbjct: 140 LLLGS---AGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVL 196
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 197 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 252
Query: 214 SEALKHPWICQRERVASIVHRQETVD 239
E L+HPWI S +E+
Sbjct: 253 REVLEHPWITANSSKPSNSQNKESAS 278
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R +GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 219
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 117/250 (46%), Gaps = 34/250 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ +L + +L RE I L+HPNI+RL+
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + G ++ ++ + E + I ++ ++++CHS V+HRD+KPEN
Sbjct: 82 DATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 141
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-------------------------W-FGVI 153
LLL S +K+A+FG ++ ++ W GV+
Sbjct: 142 LLLGS---AGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF Y +I + +P D VT A++LI+++L NPS+R
Sbjct: 199 CYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPML 254
Query: 214 SEALKHPWIC 223
E L+HPWI
Sbjct: 255 REVLEHPWIT 264
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
S R GT YL PE+++ + + VD+W+ GV+ Y LVG PPF Y +I
Sbjct: 164 SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 1 GAFSVVRRCVQKATGLE----FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G+F V V+K +G + +A K++ L RD + + E I ++ HP IV+LH
Sbjct: 36 GSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHY 94
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ Q E YL+ D + GG+LF + ++E D + ++ +++H HS G+++RDLK
Sbjct: 95 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLK 154
Query: 117 PENLLLASKAKGAAVKLADFGLAIE-VQGEQQAW-------------------------- 149
PEN+LL + +KL DFGL+ E + E++A+
Sbjct: 155 PENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 211
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
FGV+++ +L G PF +D+ I P ++PEA++L+ + NP+
Sbjct: 212 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPA 267
Query: 209 KRITAS 214
R+ A
Sbjct: 268 NRLGAG 273
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
F GT Y++PEV+ + + + D W+ GV+++ +L G PF +D+ I
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 239
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 1 GAFSVVRRCVQKATGLE----FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G+F V V+K +G + +A K++ L RD + + E I ++ HP IV+LH
Sbjct: 35 GSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHY 93
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ Q E YL+ D + GG+LF + ++E D + ++ +++H HS G+++RDLK
Sbjct: 94 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLK 153
Query: 117 PENLLLASKAKGAAVKLADFGLAIE-VQGEQQAW-------------------------- 149
PEN+LL + +KL DFGL+ E + E++A+
Sbjct: 154 PENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
FGV+++ +L G PF +D+ I P ++PEA++L+ + NP+
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPA 266
Query: 209 KRITAS 214
R+ A
Sbjct: 267 NRLGAG 272
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
F GT Y++PEV+ + + + D W+ GV+++ +L G PF +D+ I
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 40/246 (16%)
Query: 1 GAFSVVRRCVQKATGLE----FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G+F V V+K +G + +A K++ L RD + + E I ++ HP IV+LH
Sbjct: 35 GSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHY 93
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ Q E YL+ D + GG+LF + ++E D + ++ +++H HS G+++RDLK
Sbjct: 94 AFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLK 153
Query: 117 PENLLLASKAKGAAVKLADFGLAIE-VQGEQQAW-------------------------- 149
PEN+LL + +KL DFGL+ E + E++A+
Sbjct: 154 PENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 150 -FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
FGV+++ +L G PF +D+ I P ++PEA++L+ + NP+
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSLLRMLFKRNPA 266
Query: 209 KRITAS 214
R+ A
Sbjct: 267 NRLGAG 272
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
F GT Y++PEV+ + + + D W+ GV+++ +L G PF +D+ I
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMI 238
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 35/242 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G +VR+ + +G +A K++ L RD + + E I + HP +V+LH + Q
Sbjct: 42 GKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQT 101
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
E YL+ D + GG+LF + ++E D + ++ ++H HS G+++RDLKPEN+
Sbjct: 102 EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENI 161
Query: 121 LLASKAKGAAVKLADFGLAIE-VQGEQQAW---------------------------FGV 152
LL + +KL DFGL+ E + E++A+ +GV
Sbjct: 162 LLDEEGH---IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGV 218
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
+++ +L G PF +D+ I P ++ EA++L+ + NP+ R+
Sbjct: 219 LMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLLRALFKRNPANRLG 274
Query: 213 AS 214
+
Sbjct: 275 SG 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F GT Y++PEV+ ++ + D W+ GV+++ +L G PF +D+
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDR 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 122/251 (48%), Gaps = 34/251 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V R K T A K I ++ +A D + ++RE R L+HPNIVR + I
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYI--ERGAAID-ENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++ + +GGEL+E I +SE +A QQ+L V++CHS + HRDLK EN
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENT 147
Query: 121 LLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AW-FGV 152
LL + +K+ DFG +A EV Q+ W GV
Sbjct: 148 LL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGV 206
Query: 153 ILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
LY++LVG PF D ++ R Y + + + Y P+ ++PE +LI+++ +P+ R
Sbjct: 207 TLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATR 266
Query: 211 ITASEALKHPW 221
I+ E H W
Sbjct: 267 ISIPEIKTHSW 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQHRLY 307
S + GTP Y++PEVL ++ Y GK D+W+CGV LY++LVG PF D ++ R Y
Sbjct: 172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 125/255 (49%), Gaps = 36/255 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V R K + A K I +K++A ++RE R L+HPNIVR + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEKIAA----NVKREIINHRSLRHPNIVRFKEVIL 85
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ +V + +GGELFE I +SE +A QQ++ V++CH+ V HRDLK EN
Sbjct: 86 TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLEN 145
Query: 120 LLLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AW-FG 151
LL + +K+ DFG +A EV +++ W G
Sbjct: 146 TLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCG 204
Query: 152 VILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
V LY++LVG PF D ++ + + + + Y P++ ++PE ++LI+++ +P+K
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAK 264
Query: 210 RITASEALKHPWICQ 224
RI+ E H W +
Sbjct: 265 RISIPEIRNHEWFLK 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQ 303
S + GTP Y++PEVL K+ Y GK D+W+CGV LY++LVG PF D ++
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V R K + A K I + + + ++RE R L+HPNIVR + I
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +V + +GGELFE I +SE +A QQ++ V++CH+ V HRDLK EN
Sbjct: 86 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 145
Query: 121 LLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AW-FGV 152
LL + +K+ DFG +A EV +++ W GV
Sbjct: 146 LL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 204
Query: 153 ILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
LY++LVG PF D ++ + + + + Y P++ ++PE ++LI+++ +P+KR
Sbjct: 205 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKR 264
Query: 211 ITASEALKHPWICQ 224
I+ E H W +
Sbjct: 265 ISIPEIRNHEWFLK 278
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQ 303
S + GTP Y++PEVL K+ Y GK D+W+CGV LY++LVG PF D ++
Sbjct: 170 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 127/281 (45%), Gaps = 63/281 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR------------------------DFQKL 36
G++ VV+ + +A K+++ KKL + +++
Sbjct: 24 GSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQV 83
Query: 37 EREARICRKLQHPNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
+E I +KL HPN+V+L + + + E++ Y+VF+LV G + E + + SE A
Sbjct: 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKPLSEDQARFY 142
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ-------- 146
Q +++ + + H ++HRD+KP NLL+ +K+ADFG++ E +G
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFKGSDALLSNTVG 199
Query: 147 ----------------------QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 183
W GV LY + G PF DE L+++IK+ A ++
Sbjct: 200 TPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEF 259
Query: 184 PSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
P + + + K+LI +ML NP RI E HPW+ +
Sbjct: 260 P--DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 259 AGTPGYLSPEVL---KKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA- 314
GTP +++PE L +K GK +D+WA GV LY + G PF DE L+++IK+ A
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 315 -YDDEP 319
+ D+P
Sbjct: 258 EFPDQP 263
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V R K A K I + + + ++RE R L+HPNIVR + I
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +V + +GGELFE I +SE +A QQ++ V++ H+ V HRDLK EN
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENT 146
Query: 121 LLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AWF-GV 152
LL + +K+ADFG +A EV +++ W GV
Sbjct: 147 LL-DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 153 ILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
LY++LVG PF D ++ + + + + Y P++ ++PE ++LI+++ +P+KR
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKR 265
Query: 211 ITASEALKHPWICQ 224
I+ E H W +
Sbjct: 266 ISIPEIRNHEWFLK 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 260 GTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQ 303
GTP Y++PEVL K+ Y GK D+W+CGV LY++LVG PF D ++
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG FA KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG FA KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG FA KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V R K + A K I + + + ++RE R L+HPNIVR + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +V + +GGELFE I +SE +A QQ++ V++CH+ V HRDLK EN
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 121 LLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AW-FGV 152
LL + +K+ FG +A EV +++ W GV
Sbjct: 147 LL-DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 153 ILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
LY++LVG PF D ++ + + + + Y P++ ++PE ++LI+++ +P+KR
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKR 265
Query: 211 ITASEALKHPWICQ 224
I+ E H W +
Sbjct: 266 ISIPEIRNHEWFLK 279
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 260 GTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQ 303
GTP Y++PEVL K+ Y GK D+W+CGV LY++LVG PF D ++
Sbjct: 178 GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V R K + A K I + + + ++RE R L+HPNIVR + I
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGE---KIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +V + +GGELFE I +SE +A QQ++ V++CH+ V HRDLK EN
Sbjct: 87 PTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENT 146
Query: 121 LLASKAKGAAVKLADFG--------------------LAIEVQGEQQ-------AW-FGV 152
LL + +K+ FG +A EV +++ W GV
Sbjct: 147 LL-DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGV 205
Query: 153 ILYILLVGYPPFWDEDQHRLYAQI--KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
LY++LVG PF D ++ + + + + Y P++ ++PE ++LI+++ +P+KR
Sbjct: 206 TLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKR 265
Query: 211 ITASEALKHPWICQ 224
I+ E H W +
Sbjct: 266 ISIPEIRNHEWFLK 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQ 303
S + GTP Y++PEVL K+ Y GK D+W+CGV LY++LVG PF D ++
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIXNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +K+ADFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +K+ADFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 193 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 303
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 341
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 164
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 165 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 220 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 275
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K A K++ +L + +L RE I L+HPNI+R+++
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 85
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GEL++++ + E ++ ++++ +++++CH V+HRD+KPEN
Sbjct: 86 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 145
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------VQGEQQ-----AW-FGVI 153
LL+ K + +K+ADFG ++ ++G+ W GV+
Sbjct: 146 LLMGYKGE---LKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 202
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF + +I +P ++ +K+LI+++L +P +R+
Sbjct: 203 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPPQRLPL 258
Query: 214 SEALKHPWICQRER 227
++HPW+ R
Sbjct: 259 KGVMEHPWVKANSR 272
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
R+ GT YL PE+++ + + + VD+W GV+ Y LVG PPF
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K A K++ +L + +L RE I L+HPNI+R+++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GEL++++ + E ++ ++++ +++++CH V+HRD+KPEN
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------VQGEQQ-----AW-FGVI 153
LL+ K + +K+ADFG ++ ++G+ W GV+
Sbjct: 145 LLMGYKGE---LKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF + +I +P ++ +K+LI+++L +P +R+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPPQRLPL 257
Query: 214 SEALKHPWICQRER 227
++HPW+ R
Sbjct: 258 KGVMEHPWVKANSR 271
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
R+ GT YL PE+++ + + + VD+W GV+ Y LVG PPF
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 122/254 (48%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K A K++ +L + +L RE I L+HPNI+R+++
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GEL++++ + E ++ ++++ +++++CH V+HRD+KPEN
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------VQGEQQ-----AW-FGVI 153
LL+ K + +K+ADFG ++ ++G+ W GV+
Sbjct: 145 LLMGYKGE---LKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVL 201
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LVG PPF + +I +P ++ +K+LI+++L +P +R+
Sbjct: 202 CYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPPQRLPL 257
Query: 214 SEALKHPWICQRER 227
++HPW+ R
Sbjct: 258 KGVMEHPWVKANSR 271
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
R+ GT YL PE+++ + + + VD+W GV+ Y LVG PPF
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ ++ ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ ++ ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG 253
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
AGTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+P ++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 173 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLPNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 158
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 159 LLIDEQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 213
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 214 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 269
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 270 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 307
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 187 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 240
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP L+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ ++ + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFGLA V+G + W GV
Sbjct: 172 LMIDQQ---GYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 39/277 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-----------------------WF--GVIL 154
LL+ + +++ DFG A V+G W+ GV++
Sbjct: 193 LLIDQQ---GYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 249
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI--- 211
Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 250 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNL 305
Query: 212 --TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 306 KNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 104
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 164
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 165 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 219
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 220 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 275
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 276 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 313
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 193 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 246
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + + GG++F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +K+ADFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + + GG++F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +K+ADFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +++ DFG A V+G + W GV
Sbjct: 172 LIIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 39/277 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 157
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA-----------------------WF--GVIL 154
LL+ + +++ DFG A V+G W+ GV++
Sbjct: 158 LLIDQQ---GYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLI 214
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI--- 211
Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 215 YEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFGNL 270
Query: 212 --TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 271 KDGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 306
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 186 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 239
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + ++E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKDGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ ++ + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +++ DFGLA V+G + W GV
Sbjct: 172 LMIDQQ---GYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 73 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 193 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 247
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 248 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 303
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 304 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 341
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 274
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 47 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 106
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 166
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 167 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 221
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 222 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 277
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 278 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 195 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 248
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 128/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 172 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 129/279 (46%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V K +G +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK--- 209
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +K
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKAFG 282
Query: 210 --RITASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
+ ++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 172 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + V GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
LL+ + +++ DFG A V+G + W GV
Sbjct: 173 LLIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA K++ + L +K+ E I + L +P++V H +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++++ Y+V ++ L E R+ +E +A + ++Q ++ V + H+N V+HRDLK N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQA-------------------------W-FG 151
L L VK+ DFGLA IE GE++ W G
Sbjct: 173 LFLNDDMD---VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
ILY LLVG PPF Y +IK Y P + P A LI +ML +P+ R
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRP 285
Query: 212 TASEAL 217
+ +E L
Sbjct: 286 SVAELL 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VDIW+ G ILY LLVG PPF Y +IK
Sbjct: 199 KKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 315 YDDEPKH 321
Y P+H
Sbjct: 259 Y-SVPRH 264
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA K++ + L +K+ E I + L +P++V H +
Sbjct: 37 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 96
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++++ Y+V ++ L E R+ +E +A + ++Q ++ V + H+N V+HRDLK N
Sbjct: 97 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 156
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQA-------------------------W-FG 151
L L VK+ DFGLA IE GE++ W G
Sbjct: 157 LFLNDDMD---VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG 213
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
ILY LLVG PPF Y +IK Y P + P A LI +ML +P+ R
Sbjct: 214 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRP 269
Query: 212 TASEAL 217
+ +E L
Sbjct: 270 SVAELL 275
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VDIW+ G ILY LLVG PPF Y +IK
Sbjct: 183 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 242
Query: 315 YDDEPKH 321
Y P+H
Sbjct: 243 Y-SVPRH 248
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA K++ + L +K+ E I + L +P++V H +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++++ Y+V ++ L E R+ +E +A + ++Q ++ V + H+N V+HRDLK N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQA-------------------------W-FG 151
L L VK+ DFGLA IE GE++ W G
Sbjct: 173 LFLNDDMD---VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
ILY LLVG PPF Y +IK Y P + P A LI +ML +P+ R
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRP 285
Query: 212 TASEAL 217
+ +E L
Sbjct: 286 SVAELL 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VDIW+ G ILY LLVG PPF Y +IK
Sbjct: 199 KKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 315 YDDEPKH 321
Y P+H
Sbjct: 259 Y-SVPRH 264
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA K++ + L +K+ E I + L +P++V H +
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++++ Y+V ++ L E R+ +E +A + ++Q ++ V + H+N V+HRDLK N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 120 LLLASKAKGAAVKLADFGLA--IEVQGEQQA-------------------------W-FG 151
L L VK+ DFGLA IE GE++ W G
Sbjct: 173 LFLNDDMD---VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
ILY LLVG PPF Y +IK Y P + P A LI +ML +P+ R
Sbjct: 230 CILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRP 285
Query: 212 TASEAL 217
+ +E L
Sbjct: 286 SVAELL 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VDIW+ G ILY LLVG PPF Y +IK
Sbjct: 199 KKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNE 258
Query: 315 YDDEPKH 321
Y P+H
Sbjct: 259 Y-SVPRH 264
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P + +L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 173 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +++ DFG A V+G + W GV
Sbjct: 172 LMIDQQ---GYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P + +L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + +SE A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 173 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 118/254 (46%), Gaps = 34/254 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQ 59
G F V +K + A K++ ++ + +L RE I L HPNI+RL++
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY 93
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ YL+ + GEL++++ + E + ++++ +++ +CH V+HRD+KPEN
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
Query: 120 LLLASKAKGAAVKLADFGLAIE--------------------VQGEQQ-----AW-FGVI 153
+K+ADFG ++ ++G W GV+
Sbjct: 154 ---LLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVL 210
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITA 213
Y LLVG PPF + Y +I +P+ +V A++LI+++L NPS+R+
Sbjct: 211 CYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLISKLLRHNPSERLPL 266
Query: 214 SEALKHPWICQRER 227
++ HPW+ R
Sbjct: 267 AQVSAHPWVRANSR 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
R+ GT YL PE+++ + + VD+W GV+ Y LLVG PPF + Y +I
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRI 233
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P +V+L S +
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 172 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 226
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 227 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 282
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 283 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 320
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 200 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 253
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 6 VRRCVQKATGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEENY 63
VR+ TG FA K++ + +A+D + E I +++HP IV L + Q
Sbjct: 36 VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95
Query: 64 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLA 123
YL+ + ++GGELF + + E A + +I ++ H H G+++RDLKPEN++L
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 124 SKAKGAAVKLADFGLAIEV------------------------QGEQQA---W-FGVILY 155
+ VKL DFGL E G +A W G ++Y
Sbjct: 156 HQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMY 212
Query: 156 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI---- 211
+L G PPF E++ + +I + P +T EA++L+ ++L N + R+
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKKLLKRNAASRLGAGP 268
Query: 212 -TASEALKHPWI 222
A E HP+
Sbjct: 269 GDAGEVQAHPFF 280
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
F GT Y++PE+L + + + VD W+ G ++Y +L G PPF E++ + +I
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 6 VRRCVQKATGLEFAAKIINTKKL--SARDFQKLEREARICRKLQHPNIVRLHDSIQEENY 63
VR+ TG FA K++ + +A+D + E I +++HP IV L + Q
Sbjct: 36 VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95
Query: 64 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLA 123
YL+ + ++GGELF + + E A + +I ++ H H G+++RDLKPEN++L
Sbjct: 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
Query: 124 SKAKGAAVKLADFGLAIEV------------------------QGEQQA---W-FGVILY 155
+ VKL DFGL E G +A W G ++Y
Sbjct: 156 HQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMY 212
Query: 156 ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI---- 211
+L G PPF E++ + +I + P +T EA++L+ ++L N + R+
Sbjct: 213 DMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKKLLKRNAASRLGAGP 268
Query: 212 -TASEALKHPWI 222
A E HP+
Sbjct: 269 GDAGEVQAHPFF 280
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
F GT Y++PE+L + + + VD W+ G ++Y +L G PPF E++ + +I
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 136 LMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 249 GGGPSDAKEVMEHRFF 264
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 19 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 79 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 138
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 139 LMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 196 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 251
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 252 GGGPSDAKEVMEHRFF 267
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 220
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 136 LMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 249 GGGPSDAKEVMEHRFF 264
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 136 LMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 249 GGGPSDAKEVMEHRFF 264
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 136 LMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 249 GGGPSDAKEVMEHRFF 264
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 16 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 76 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 135
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 136 LMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 193 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 248
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 249 GGGPSDAKEVMEHRFF 264
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 41/256 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E+R+ + +HP + L + Q
Sbjct: 21 GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ 80
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ V + GGELF + ++E A +I+ ++ + HS VV+RD+K EN
Sbjct: 81 THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN 140
Query: 120 LLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--FG 151
L+L K +K+ DFGL A EV G W G
Sbjct: 141 LMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
V++Y ++ G PF+++D RL+ I +P T++PEAK+L+ +L +P +R+
Sbjct: 198 VVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 253
Query: 212 -----TASEALKHPWI 222
A E ++H +
Sbjct: 254 GGGPSDAKEVMEHRFF 269
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D RL+ I
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 222
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 43/279 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V TG +A KI++ +K+ + + E RI + + P + +L S +
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFK 112
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ + Y+V + GGE+F + + E A QI+ + + HS +++RDLKPEN
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQAW---------------------------FGV 152
L++ + +K+ DFG A V+G + W GV
Sbjct: 173 LMIDQQ---GYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGV 227
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI- 211
++Y + GYPPF+ + ++Y +I +G +PS + + K+L+ +L V+ +KR
Sbjct: 228 LIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLTKRFG 283
Query: 212 ----TASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
++ H W + +A I R+ + KF
Sbjct: 284 NLKNGVNDIKNHKWFATTDWIA-IYQRKVEAPFIPKFKG 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG 313
GTP YL+PE++ + Y K VD WA GV++Y + GYPPF+ + ++Y +I +G
Sbjct: 201 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 26 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 85
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 86 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 145
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 146 LFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 202
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 203 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 258
Query: 212 TASEAL 217
T +E L
Sbjct: 259 TINELL 264
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 231
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 232 YSI-PKH 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 50 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 109
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 110 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 169
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 170 LFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 226
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 227 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 282
Query: 212 TASEAL 217
T +E L
Sbjct: 283 TINELL 288
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 255
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 256 YSI-PKH 261
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 88 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 147
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 148 LFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 260
Query: 212 TASEAL 217
T +E L
Sbjct: 261 TINELL 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 233
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 234 YSI-PKH 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 52 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 111
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 112 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 171
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 172 LFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIG 228
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 229 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 284
Query: 212 TASEAL 217
T +E L
Sbjct: 285 TINELL 290
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 257
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 258 YSI-PKH 263
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 32 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 91
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 92 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 151
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 152 LFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 208
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 209 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 264
Query: 212 TASEAL 217
T +E L
Sbjct: 265 TINELL 270
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 178 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 237
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 238 YSI-PKH 243
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F+ T FA KI+ + L +K+ E I R L H ++V H +
Sbjct: 28 GGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE 87
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ ++ ++V +L L E R+ +E +A + ++QI+ + H N V+HRDLK N
Sbjct: 88 DNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN 147
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ--GEQQ-------------------------AW-FG 151
L L + VK+ DFGLA +V+ GE++ W G
Sbjct: 148 LFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIG 204
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
I+Y LLVG PPF Y +IK Y P + P A +LI +ML +P+ R
Sbjct: 205 CIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARP 260
Query: 212 TASEAL 217
T +E L
Sbjct: 261 TINELL 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
++ GTP Y++PEVL K+ + VD+W+ G I+Y LLVG PPF Y +IK
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE 233
Query: 315 YDDEPKH 321
Y PKH
Sbjct: 234 YSI-PKH 239
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF ++ ++A+I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF ++ ++A+I YD
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD 252
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF ++ ++A+I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF ++ ++A+I YD
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYD 252
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 80 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 139
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL + +++ DFG A E+ E+ A W
Sbjct: 140 ILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 196
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 197 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 252
Query: 210 RITASE 215
R+ E
Sbjct: 253 RLGCEE 258
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 77
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 78 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 137
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL + +++ DFG A E+ E+ A W
Sbjct: 138 ILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 194
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 195 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 250
Query: 210 RITASE 215
R+ E
Sbjct: 251 RLGCEE 256
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 80
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 81 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 140
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL + +++ DFG A E+ E+ A W
Sbjct: 141 ILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 197
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 198 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 253
Query: 210 RITASE 215
R+ E
Sbjct: 254 RLGCEE 259
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 230
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 47/270 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAWF 150
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 151 -GVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPWI-------CQRERVAS 230
S RIT + K W +R RV S
Sbjct: 250 SARITIPDIKKDRWYNKPLKKGAKRPRVTS 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 79 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 138
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL + +++ DFG A E+ E+ A W
Sbjct: 139 ILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 195
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 196 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 251
Query: 210 RITASE 215
R+ E
Sbjct: 252 RLGCEE 257
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 228
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 105
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 106 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 165
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 166 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 222
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P+ + P+A++L+ ++L ++ +K
Sbjct: 223 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFF----PKARDLVEKLLVLDATK 278
Query: 210 RITASE 215
R+ E
Sbjct: 279 RLGCEE 284
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 145 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 255
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEIXINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAWF 150
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 151 -GVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 161 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 273
Query: 210 RITASE 215
R+ E
Sbjct: 274 RLGCEE 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 164 ILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 220
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 276
Query: 210 RITASE 215
R+ E
Sbjct: 277 RLGCEE 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 202
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 161 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 273
Query: 210 RITASE 215
R+ E
Sbjct: 274 RLGCEE 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 161 ILLNEDMH---IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 273
Query: 210 RITASE 215
R+ E
Sbjct: 274 RLGCEE 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYV 199
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 47/270 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAWF 150
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 151 -GVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPWI-------CQRERVAS 230
S RIT + K W +R RV S
Sbjct: 250 SARITIPDIKKDRWYNKPLKKGAKRPRVTS 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 160 ILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWA 216
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 217 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 272
Query: 210 RITASE 215
R+ E
Sbjct: 273 RLGCEE 278
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 160 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 216
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 217 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 272
Query: 210 RITASE 215
R+ E
Sbjct: 273 RLGCEE 278
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 249
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 164 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 220
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 221 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 276
Query: 210 RITASE 215
R+ E
Sbjct: 277 RLGCEE 282
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 253
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 84
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 85 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 144
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL + +++ DFG A E+ E+ A W
Sbjct: 145 ILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 201
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 202 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 257
Query: 210 RITASE 215
R+ E
Sbjct: 258 RLGCEE 263
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 124 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 234
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E R+ + +HP + L S Q
Sbjct: 159 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS-NGVVHRDLKPE 118
+ V + GGELF + +SE A +I+ ++++ HS VV+RDLK E
Sbjct: 219 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 278
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAWFG- 151
NL+L K +K+ DFGL A EV G W+G
Sbjct: 279 NLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 335
Query: 152 -VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
V++Y ++ G PF+++D +L+ I +P T+ PEAK+L++ +L +P +R
Sbjct: 336 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQR 391
Query: 211 I-TASEALKHPWICQRERVASIV 232
+ SE K I Q A IV
Sbjct: 392 LGGGSEDAKE--IMQHRFFAGIV 412
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D +L+ I
Sbjct: 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 122/263 (46%), Gaps = 40/263 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E R+ + +HP + L S Q
Sbjct: 162 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 221
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS-NGVVHRDLKPE 118
+ V + GGELF + +SE A +I+ ++++ HS VV+RDLK E
Sbjct: 222 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 281
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAWFG- 151
NL+L K +K+ DFGL A EV G W+G
Sbjct: 282 NLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGL 338
Query: 152 -VILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
V++Y ++ G PF+++D +L+ I +P T+ PEAK+L++ +L +P +R
Sbjct: 339 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQR 394
Query: 211 I-TASEALKHPWICQRERVASIV 232
+ SE K I Q A IV
Sbjct: 395 LGGGSEDAKE--IMQHRFFAGIV 415
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D +L+ I
Sbjct: 307 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 364
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 40/263 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E R+ + +HP + L S Q
Sbjct: 19 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 78
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS-NGVVHRDLKPE 118
+ V + GGELF + +SE A +I+ ++++ HS VV+RDLK E
Sbjct: 79 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 138
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--F 150
NL+L K +K+ DFGL A EV G W
Sbjct: 139 NLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 195
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV++Y ++ G PF+++D +L+ I +P T+ PEAK+L++ +L +P +R
Sbjct: 196 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQR 251
Query: 211 I-TASEALKHPWICQRERVASIV 232
+ SE K I Q A IV
Sbjct: 252 LGGGSEDAKE--IMQHRFFAGIV 272
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D +L+ I
Sbjct: 164 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 221
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 40/263 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E R+ + +HP + L S Q
Sbjct: 20 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS-NGVVHRDLKPE 118
+ V + GGELF + +SE A +I+ ++++ HS VV+RDLK E
Sbjct: 80 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 139
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--F 150
NL+L K +K+ DFGL A EV G W
Sbjct: 140 NLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV++Y ++ G PF+++D +L+ I +P T+ PEAK+L++ +L +P +R
Sbjct: 197 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQR 252
Query: 211 I-TASEALKHPWICQRERVASIV 232
+ SE K I Q A IV
Sbjct: 253 LGGGSEDAKE--IMQHRFFAGIV 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D +L+ I
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 222
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 121/263 (46%), Gaps = 40/263 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V +KATG +A KI+ + + A+D E R+ + +HP + L S Q
Sbjct: 21 GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 80
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS-NGVVHRDLKPE 118
+ V + GGELF + +SE A +I+ ++++ HS VV+RDLK E
Sbjct: 81 THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLE 140
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEV-----QGEQQAW--F 150
NL+L K +K+ DFGL A EV G W
Sbjct: 141 NLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGL 197
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV++Y ++ G PF+++D +L+ I +P T+ PEAK+L++ +L +P +R
Sbjct: 198 GVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQR 253
Query: 211 I-TASEALKHPWICQRERVASIV 232
+ SE K I Q A IV
Sbjct: 254 LGGGSEDAKE--IMQHRFFAGIV 274
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
+T + F GTP YL+PEVL+ YG+ VD W GV++Y ++ G PF+++D +L+ I
Sbjct: 166 ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 223
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 42/255 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF-QKLEREARICRKLQHPNIVRLHDSIQ 59
GA+ V+ V + T A KI++ K+ A D + +++E I + L H N+V+ + +
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINKMLNHENVVKFYGHRR 75
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
E N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPEN
Sbjct: 76 EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN 135
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW 149
LLL + +K++DFGLA E E W
Sbjct: 136 LLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
Query: 150 -FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
G++L +L G P WD+ D + Y+ K Y +P W + L++++L N
Sbjct: 193 SCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVEN 249
Query: 207 PSKRITASEALKHPW 221
PS RIT + K W
Sbjct: 250 PSARITIPDIKKDRW 264
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 75 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 134
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 135 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 191
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 192 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 248
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 249 SARITIPDIKKDRW 262
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 154 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ Q
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQ 107
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 108 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 167
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 168 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 224
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 225 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 280
Query: 210 RITASE 215
R+ E
Sbjct: 281 RLGCEE 286
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 147 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 257
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 115/254 (45%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 158 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 213
Query: 136 FGLAIEVQG---------------------------EQQAW-FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 214 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 274 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 329
Query: 225 RERVASIV 232
ASIV
Sbjct: 330 AGPPASIV 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 216 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 275
Query: 304 HRLYAQIK 311
+ I+
Sbjct: 276 LKAMKMIR 283
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 41 GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y GEL + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 120 LLLASKAKGAAVKLADFGLAI-----------------------EVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 161 ILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWA 217
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 218 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 273
Query: 210 RITASE 215
R+ E
Sbjct: 274 RLGCEE 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 250
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 108 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 163
Query: 136 FGLAIEVQG---------------------------EQQAW-FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 164 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 224 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 279
Query: 225 RERVASIV 232
ASIV
Sbjct: 280 AGPPASIV 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 166 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 115 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 170
Query: 136 FGLAIEVQG---------------------------EQQAW-FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 171 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 231 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 286
Query: 225 RERVASIV 232
ASIV
Sbjct: 287 AGPPASIV 294
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 173 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 232
Query: 304 HRLYAQIK 311
+ I+
Sbjct: 233 LKAMKMIR 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 104 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 159
Query: 136 FGLAIEVQG---------------------------EQQAW-FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 160 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 220 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 275
Query: 225 RERVASIV 232
ASIV
Sbjct: 276 AGPPASIV 283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 162 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 221
Query: 304 HRLYAQIK 311
+ I+
Sbjct: 222 LKAMKMIR 229
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 113 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 168
Query: 136 FGLAIEVQG---------------------------EQQAW-FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 169 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 229 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 284
Query: 225 RERVASIV 232
ASIV
Sbjct: 285 AGPPASIV 292
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 171 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 230
Query: 304 HRLYAQIK 311
+ I+
Sbjct: 231 LKAMKMIR 238
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 119/248 (47%), Gaps = 42/248 (16%)
Query: 19 AAKIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
+ K++ KK+ R Q+ E E I R QH N+V +++S + ++V + + GG
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + + E A+ C+ +L++++ H+ GV+HRD+K +++LL + VKL+D
Sbjct: 235 LTDIVTHTRMNEEQIAAVCLA-VLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 290
Query: 136 FGLAIEVQGE---------QQAW-------------------FGVILYILLVGYPPFWDE 167
FG +V E W G+++ ++ G PP+++E
Sbjct: 291 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 168 DQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ I+ D P V+P K ++++L +P++R TA+E LKHP++ +
Sbjct: 351 PPLKAMKMIR----DNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAK 406
Query: 225 RERVASIV 232
ASIV
Sbjct: 407 AGPPASIV 414
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PE++ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 293 FCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352
Query: 304 HRLYAQIK 311
+ I+
Sbjct: 353 LKAMKMIR 360
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V+ V + T A KI++ K+ + + +++E I L H N+V+ + +E
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINAMLNHENVVKFYGHRRE 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 137 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 193
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 194 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 250
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 251 SARITIPDIKKDRW 264
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 156 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 40/254 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V+ V + T A KI++ K+ + + +++E I + L H N+V+ + +E
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKR-AVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
N YL + +GGELF+ I E DA Q++ V + H G+ HRD+KPENL
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 121 LLASKAKGAAVKLADFGLAI-----------------------------EVQGEQ-QAW- 149
LL + +K++DFGLA E E W
Sbjct: 136 LLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWS 192
Query: 150 FGVILYILLVGYPPFWDE--DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
G++L +L G P WD+ D + Y+ K Y +P W + L++++L NP
Sbjct: 193 CGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKK-TYLNP-WKKIDSAPLALLHKILVENP 249
Query: 208 SKRITASEALKHPW 221
S RIT + K W
Sbjct: 250 SARITIPDIKKDRW 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 6/60 (10%)
Query: 243 KFNARRKLKVSTRQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPFWDE 301
++N R +L GT Y++PE+LK+ E + +PVD+W+CG++L +L G P WD+
Sbjct: 155 RYNNRERL----LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQ 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 113/246 (45%), Gaps = 38/246 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+FS V + AT E+A KI+ + + + + RE + +L HP V+L+ + Q
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y G L + I + E +I+ ++ + H G++HRDLKPEN
Sbjct: 103 DDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 120 LLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQA------W- 149
+LL +++ DFG A E+ E+ A W
Sbjct: 163 ILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWA 219
Query: 150 FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK 209
G I+Y L+ G PPF +++ ++ +I YD+P + P+A++L+ ++L ++ +K
Sbjct: 220 LGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATK 275
Query: 210 RITASE 215
R+ E
Sbjct: 276 RLGCEE 281
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 211 ITASEALKHPWICQRE-RVASIVHRQETVDCLKKFNARRKLKVSTRQG----FAGTPGYL 265
++A E L I R+ + +I+ ++ + F + L ++Q F GT Y+
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 201
Query: 266 SPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD 316
SPE+L ++ K D+WA G I+Y L+ G PPF +++ ++ +I YD
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYD 252
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 46/276 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+ +V +K +G + A K+++ +K R+ L E I R QH N+V ++ S
Sbjct: 56 GSTGIVCLAREKHSGRQVAVKMMDLRKQQRREL--LFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+++ + + GG L DIV++ +E + + +L+++ + H+ GV+HRD+K +++
Sbjct: 114 GEELWVLMEFLQGGAL-TDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSI 172
Query: 121 LLASKAKGAAVKLADFGLAIEVQ---------------------------GEQQAW-FGV 152
LL + VKL+DFG ++ E W G+
Sbjct: 173 LLTLDGR---VKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT---VTPEAKNLINQMLTVNPSK 209
++ ++ G PP++ + + +++ D P P+ V+P ++ + +ML +P +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLR----DSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 210 RITASEALKHPWICQRERVASIV-----HRQETVDC 240
R TA E L HP++ Q +V +R++T C
Sbjct: 286 RATAQELLDHPFLLQTGLPECLVPLIQLYRKQTSTC 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
F A+ V R+ GTP +++PEV+ + Y VDIW+ G+++ ++ G PP++ +
Sbjct: 187 FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 38/253 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V + G +A K++ + + + + E + + HP I+R+ + Q
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+ +++ D + GGELF + + + A ++ ++ + HS +++RDLKPEN
Sbjct: 77 DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN 136
Query: 120 LLLASKAKGAAVKLADFGLAIEV-----------------------QGEQQAW--FGVIL 154
+LL K +K+ DFG A V + W FG+++
Sbjct: 137 ILL---DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILI 193
Query: 155 YILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI--- 211
Y +L GY PF+D + + Y +I +P + K+L+++++T + S+R+
Sbjct: 194 YEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLLSRLITRDLSQRLGNL 249
Query: 212 -TASEALK-HPWI 222
+E +K HPW
Sbjct: 250 QNGTEDVKNHPWF 262
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
GTP Y++PEV+ +PY K +D W+ G+++Y +L GY PF+D + + Y +I
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 111/247 (44%), Gaps = 41/247 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-----QHPNIVRLH 55
G +VR+ TG +A K++ KK + K R R++ Q P +V LH
Sbjct: 68 GKVFLVRKISGHDTGKLYAMKVL--KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 125
Query: 56 DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ Q E +L+ D + GGELF + RE ++E + + +I+ ++ H H G+++RD+
Sbjct: 126 YAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDI 185
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEV---------------------------QGEQQA 148
K EN+LL S V L DFGL+ E G +A
Sbjct: 186 KLENILLDSNGH---VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 149 --W--FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W GV++Y LL G PF + + A+I P ++ AK+LI ++L
Sbjct: 243 VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLM 302
Query: 205 VNPSKRI 211
+P KR+
Sbjct: 303 KDPKKRL 309
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 258 FAGTPGYLSPEVLKKEPYG--KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F GT Y++P++++ G K VD W+ GV++Y LL G PF + + A+I
Sbjct: 220 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 279
Query: 316 DDEP 319
EP
Sbjct: 280 KSEP 283
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 111/245 (45%), Gaps = 37/245 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQK--LEREARICRKLQHPNIVRLHDSI 58
G+F V KA + +A K++ K + + +K + + + ++HP +V LH S
Sbjct: 49 GSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF 108
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + Y V D + GGELF + + E A +I ++ + HS +V+RDLKPE
Sbjct: 109 QTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPE 168
Query: 119 NLLLASKAKGAAVKLADFGL---------------------AIEVQGEQQ-----AW--F 150
N+LL S+ + L DFGL A EV +Q W
Sbjct: 169 NILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCL 225
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G +LY +L G PPF+ + +Y I + P +T A++L+ +L + +KR
Sbjct: 226 GAVLYEMLYGLPPFYSRNTAEMYDNI----LNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
Query: 211 ITASE 215
+ A +
Sbjct: 282 LGAKD 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
ST F GTP YL+PEVL K+PY + VD W G +LY +L G PPF+ + +Y I
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI 251
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 40/277 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F G ++ K IN ++S+++ ++ RE + ++HPNIV+ +S +E
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE 94
Query: 61 ENYHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Y+V D GG+LF+ I A++ + E QI ++ H H ++HRD+K +
Sbjct: 95 NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQ 154
Query: 119 NLLLASKAKGAAVKLADFGLA------IEV---------------------QGEQQAW-F 150
N+ L K V+L DFG+A +E+ + W
Sbjct: 155 NIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWAL 211
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G +LY L F L +I +G++ S + + + ++L++Q+ NP R
Sbjct: 212 GCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY---SYDLRSLVSQLFKRNPRDR 268
Query: 211 ITASEALKHPWICQRERVASIVHRQETVD--CLKKFN 245
+ + L+ +I + R+ + Q + CLK F+
Sbjct: 269 PSVNSILEKGFIAK--RIEKFLSPQLIAEEFCLKTFS 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GTP YLSPE+ + +PY DIWA G +LY L F L +I +G++
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF 242
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 118/260 (45%), Gaps = 55/260 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+ +V +K TG + A K ++ +K R+ L E I R H N+V ++ S
Sbjct: 56 GSTGIVCIATEKHTGKQVAVKKMDLRKQQRREL--LFNEVVIMRDYHHDNVVDMYSSYLV 113
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L + + E A+ C+ +L ++++ H+ GV+HRD+K +++
Sbjct: 114 GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS-VLRALSYLHNQGVIHRDIKSDSI 172
Query: 121 LLASKAKGAAVKLADFGLAIEVQ---------------------------GEQQAW-FGV 152
LL S + +KL+DFG +V E W G+
Sbjct: 173 LLTSDGR---IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGI 229
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNL----------INQM 202
++ ++ G PP+++E + +I+ D++ P K+L ++ M
Sbjct: 230 MVIEMIDGEPPYFNEPPLQAMRRIR-----------DSLPPRVKDLHKVSSVLRGFLDLM 278
Query: 203 LTVNPSKRITASEALKHPWI 222
L PS+R TA E L HP++
Sbjct: 279 LVREPSQRATAQELLGHPFL 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ +V R+ GTP +++PEV+ + PYG VDIW+ G+++ ++ G PP+++E
Sbjct: 187 FCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP 246
Query: 304 HRLYAQIKAGAYDDEPK-----HKSASVVK 328
+ +I+ D P HK +SV++
Sbjct: 247 LQAMRRIR----DSLPPRVKDLHKVSSVLR 272
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ ++ + F D A + Q+L+ + CHS+ V+HRDLKPEN
Sbjct: 77 ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 74
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ ++ + F D A + Q+L+ + CHS+ V+HRDLKPEN
Sbjct: 75 ENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 135 LLINTE---GAIKLADFGLA 151
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 75
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKPEN
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 135
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 136 LLINTE---GAIKLADFGLA 152
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 74
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKPEN
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 134
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 135 LLINTE---GAIKLADFGLA 151
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ ++ + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 77 ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 75
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ ++ + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 76 ENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 136 LLINTE---GAIKLADFGLA 152
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ ++ CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 77 ENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKPEN
Sbjct: 74 ENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPEN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V + ATG E A + +N ++ ++ + E + R+ ++PNIV DS
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLV 88
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L D+V E + ++ L+++ HSN V+HRD+K +N+
Sbjct: 89 GDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQA---------W-------------------FGV 152
LL +VKL DFG ++ EQ W G+
Sbjct: 148 LLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 153 ILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
+ ++ G PP+ +E+ R LY G + +PE ++ ++ +N+ L ++ KR
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRG 262
Query: 212 TASEALKHPWI 222
+A E L+H ++
Sbjct: 263 SAKELLQHQFL 273
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ + S R GTP +++PEV+ ++ YG VDIW+ G++ ++ G PP+ +E+
Sbjct: 162 FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
Query: 304 HR 305
R
Sbjct: 222 LR 223
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V + ATG E A + +N ++ ++ + E + R+ ++PNIV DS
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLV 88
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L D+V E + ++ L+++ HSN V+HRD+K +N+
Sbjct: 89 GDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQA---------W-------------------FGV 152
LL +VKL DFG ++ EQ W G+
Sbjct: 148 LLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 153 ILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
+ ++ G PP+ +E+ R LY G + +PE ++ ++ +N+ L ++ KR
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRG 262
Query: 212 TASEALKHPWI 222
+A E L+H ++
Sbjct: 263 SAKELLQHQFL 273
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ + S R GTP +++PEV+ ++ YG VDIW+ G++ ++ G PP+ +E+
Sbjct: 162 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
Query: 304 HR 305
R
Sbjct: 222 LR 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V + ATG E A + +N ++ ++ + E + R+ ++PNIV DS
Sbjct: 31 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLV 88
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L D+V E + ++ L+++ HSN V+HRD+K +N+
Sbjct: 89 GDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 147
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQA---------W-------------------FGV 152
LL +VKL DFG ++ EQ W G+
Sbjct: 148 LLGMD---GSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 153 ILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
+ ++ G PP+ +E+ R LY G + +PE ++ ++ +N+ L ++ KR
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRG 262
Query: 212 TASEALKHPWI 222
+A E L+H ++
Sbjct: 263 SAKELLQHQFL 273
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ + S R GTP +++PEV+ ++ YG VDIW+ G++ ++ G PP+ +E+
Sbjct: 162 FCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 221
Query: 304 HR 305
R
Sbjct: 222 LR 223
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 80
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 141 LLINTE---GAIKLADFGLA 157
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 132/316 (41%), Gaps = 56/316 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICR-KLQHPNIVRLHDSI 58
G+F V K TG +A K++ L D + E RI HP + +L
Sbjct: 34 GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + + V + V GG+L I + EA A +I+ ++ H G+++RDLK +
Sbjct: 94 QTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLD 153
Query: 119 NLLLASKAKGAAVKLADFGLAIE--VQGEQQAWF-------------------------- 150
N+LL + KLADFG+ E G A F
Sbjct: 154 NVLLDHEGH---CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L G+ PF E++ L+ I YP+ W + +A ++ +T NP+ R
Sbjct: 211 GVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LHEDATGILKSFMTKNPTMR 266
Query: 211 ITA------SEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGTPGY 264
+ + L+HP+ + + A + HRQ + ++ +R+ +
Sbjct: 267 LGSLTQGGEHAILRHPFFKEIDW-AQLNHRQ--------IEPPFRPRIKSREDVSN---- 313
Query: 265 LSPEVLKKEPYGKPVD 280
P+ +K+EP P+D
Sbjct: 314 FDPDFIKEEPVLXPID 329
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
T F GTP Y++PE+L++ YG VD WA GV+LY +L G+ PF E++ L+ I
Sbjct: 180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 21 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 80
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 81 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 140
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 141 LLINTE---GAIKLADFGLA 157
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ V + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ V + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 77 ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 17 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 76
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 77 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 136
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 137 LLINTE---GAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 75
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 136 LLINTE---GAIKLADFGLA 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 16 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 75
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 76 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 135
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 136 LLINTE---GAIKLADFGLA 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 77
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 138 LLINTE---GAIKLADFGLA 154
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 74
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 135 LLINTE---GAIKLADFGLA 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 18 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 77
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 78 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 137
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 138 LLINTE---GAIKLADFGLA 154
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 74
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 135 LLINTE---GAIKLADFGLA 151
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 15 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 74
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 75 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 134
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 135 LLINTE---GAIKLADFGLA 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A K I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V + ATG E A + +N ++ ++ + E + R+ ++PNIV DS
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLV 89
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L D+V E + ++ L+++ HSN V+HRD+K +N+
Sbjct: 90 GDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNI 148
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQA---------W-------------------FGV 152
LL +VKL DFG ++ EQ W G+
Sbjct: 149 LLGMD---GSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 153 ILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
+ ++ G PP+ +E+ R LY G + +PE ++ ++ +N+ L ++ KR
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRG 263
Query: 212 TASEALKHPWI 222
+A E ++H ++
Sbjct: 264 SAKELIQHQFL 274
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ + S R GTP +++PEV+ ++ YG VDIW+ G++ ++ G PP+ +E+
Sbjct: 163 FCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
Query: 304 HR 305
R
Sbjct: 223 LR 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 130/296 (43%), Gaps = 70/296 (23%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G ++ V + + K TG+ A K + + RE + ++L+H NIVRL+D I
Sbjct: 16 GTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-REISLMKELKHENIVRLYDVIHT 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYS-----EADASHCIQ-QILESVNHCHSNGVVHRD 114
EN LVF+ + +L + + +R + E + Q Q+L+ + CH N ++HRD
Sbjct: 75 ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRD 133
Query: 115 LKPENLLLASKAKGAAVKLADFGLA----IEVQGEQQA----WF---------------- 150
LKP+NLL+ + + +KL DFGLA I V W+
Sbjct: 134 LKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 151 -----GVILYILLVGYPPF---WDEDQHRLYAQIKAGAYD--YPS----PEWD------- 189
G IL ++ G P F DE+Q +L I + +PS P+++
Sbjct: 191 DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRP 250
Query: 190 -----------TVTPEAKNLIN---QMLTVNPSKRITASEALKHPWICQRERVASI 231
T P NL++ +L +NP R++A +AL HPW + AS+
Sbjct: 251 PRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHASM 306
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 264 YLSPEVLK-KEPYGKPVDIWACGVILYILLVGYPPF---WDEDQHRLYAQI 310
Y +P+VL Y +DIW+CG IL ++ G P F DE+Q +L I
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDI 224
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-- 58
G++ ++ +K+ G K ++ ++ + Q L E + R+L+HPNIVR +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 59 QEENYHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESVNHCH--SNG--- 109
+ Y+V + GG+L I R++ E + Q+ ++ CH S+G
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA---------------------------IEV 142
V+HRDLKP N+ L K VKL DFGLA +
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSY 193
Query: 143 QGEQQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
+ W G +LY L PPF Q L +I+ G + + + E +I +
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY---SDELNEIITR 250
Query: 202 MLTVNPSKRITASEALKHPWICQ 224
ML + R + E L++P I +
Sbjct: 251 MLNLKDYHRPSVEEILENPLILE 273
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDD 317
F GTP Y+SPE + + Y + DIW+ G +LY L PPF Q L +I+ G +
Sbjct: 176 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 318 EP 319
P
Sbjct: 236 IP 237
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-- 58
G++ ++ +K+ G K ++ ++ + Q L E + R+L+HPNIVR +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 59 QEENYHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESVNHCH--SNG--- 109
+ Y+V + GG+L I R++ E + Q+ ++ CH S+G
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA---------------------------IEV 142
V+HRDLKP N+ L K VKL DFGLA +
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSY 193
Query: 143 QGEQQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
+ W G +LY L PPF Q L +I+ G + + + E +I +
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY---SDELNEIITR 250
Query: 202 MLTVNPSKRITASEALKHPWICQ 224
ML + R + E L++P I +
Sbjct: 251 MLNLKDYHRPSVEEILENPLILE 273
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 252 VSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
S + F GTP Y+SPE + + Y + DIW+ G +LY L PPF Q L +I+
Sbjct: 170 TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 312 AGAYDDEP 319
G + P
Sbjct: 230 EGKFRRIP 237
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 45/263 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-- 58
G++ ++ +K+ G K ++ ++ + Q L E + R+L+HPNIVR +D I
Sbjct: 17 GSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID 76
Query: 59 QEENYHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESVNHCH--SNG--- 109
+ Y+V + GG+L I R++ E + Q+ ++ CH S+G
Sbjct: 77 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT 136
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA---------------------------IEV 142
V+HRDLKP N+ L K VKL DFGLA +
Sbjct: 137 VLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSY 193
Query: 143 QGEQQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
+ W G +LY L PPF Q L +I+ G + + + E +I +
Sbjct: 194 NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY---SDELNEIITR 250
Query: 202 MLTVNPSKRITASEALKHPWICQ 224
ML + R + E L++P I +
Sbjct: 251 MLNLKDYHRPSVEEILENPLILE 273
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 252 VSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
S + F GTP Y+SPE + + Y + DIW+ G +LY L PPF Q L +I+
Sbjct: 170 TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
Query: 312 AGAYDDEP 319
G + P
Sbjct: 230 EGKFRRIP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 48/276 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V+ K+T +A K+++ ++ R E R I P +V+L + Q
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y Y+V + + GG+L ++++ E A +++ +++ HS G +HRD+KP+N
Sbjct: 140 DDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 198
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ-------------------------------GEQQA 148
+LL K +KLADFG +++ G +
Sbjct: 199 MLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 149 WF--GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
W+ GV LY +LVG PF+ + Y++I P+ + ++ EAKNLI LT
Sbjct: 256 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 315
Query: 207 PSK--RITASEALKH--------PWICQRERVASIV 232
+ R E +H W R+ VA +V
Sbjct: 316 EVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 351
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 259 AGTPGYLSPEVLKKEP----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
GTP Y+SPEVLK + YG+ D W+ GV LY +LVG PF YA G
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--------YADSLVGT 281
Query: 315 YDDEPKHKSA 324
Y HK++
Sbjct: 282 YSKIMNHKNS 291
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 48/276 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V+ K+T +A K+++ ++ R E R I P +V+L + Q
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y Y+V + + GG+L ++++ E A +++ +++ HS G +HRD+KP+N
Sbjct: 145 DDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ-------------------------------GEQQA 148
+LL K +KLADFG +++ G +
Sbjct: 204 MLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 149 WF--GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
W+ GV LY +LVG PF+ + Y++I P+ + ++ EAKNLI LT
Sbjct: 261 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 320
Query: 207 PSK--RITASEALKH--------PWICQRERVASIV 232
+ R E +H W R+ VA +V
Sbjct: 321 EVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 259 AGTPGYLSPEVLKKEP----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
GTP Y+SPEVLK + YG+ D W+ GV LY +LVG PF YA G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--------YADSLVGT 286
Query: 315 YDDEPKHKSA 324
Y HK++
Sbjct: 287 YSKIMNHKNS 296
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 48/276 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V+ K+T +A K+++ ++ R E R I P +V+L + Q
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 144
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y Y+V + + GG+L ++++ E A +++ +++ HS G +HRD+KP+N
Sbjct: 145 DDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ-------------------------------GEQQA 148
+LL K +KLADFG +++ G +
Sbjct: 204 MLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 149 WF--GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
W+ GV LY +LVG PF+ + Y++I P+ + ++ EAKNLI LT
Sbjct: 261 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDR 320
Query: 207 PSK--RITASEALKH--------PWICQRERVASIV 232
+ R E +H W R+ VA +V
Sbjct: 321 EVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVV 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Query: 259 AGTPGYLSPEVLKKEP----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA 314
GTP Y+SPEVLK + YG+ D W+ GV LY +LVG PF YA G
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF--------YADSLVGT 286
Query: 315 YDDEPKHKSA 324
Y HK++
Sbjct: 287 YSKIMNHKNS 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A I + RE + ++L HPNIV+L D I
Sbjct: 14 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 73
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 74 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 133
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 134 LLINTE---GAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + K TG A I + RE + ++L HPNIV+L D I
Sbjct: 13 GTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT 72
Query: 61 ENYHYLVFDLVTGG-ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
EN YLVF+ + + F D A + Q+L+ + CHS+ V+HRDLKP+N
Sbjct: 73 ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN 132
Query: 120 LLLASKAKGAAVKLADFGLA 139
LL+ ++ A+KLADFGLA
Sbjct: 133 LLINTE---GAIKLADFGLA 149
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA V + ATG E A + +N ++ ++ + E + R+ ++PNIV DS
Sbjct: 32 GASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--IINEILVMRENKNPNIVNYLDSYLV 89
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ ++V + + GG L D+V E + ++ L+++ HSN V+HR++K +N+
Sbjct: 90 GDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNI 148
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQQA---------W-------------------FGV 152
LL +VKL DFG ++ EQ W G+
Sbjct: 149 LLGMD---GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 205
Query: 153 ILYILLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI 211
+ ++ G PP+ +E+ R LY G + +PE ++ ++ +N+ L ++ KR
Sbjct: 206 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRG 263
Query: 212 TASEALKHPWI 222
+A E ++H ++
Sbjct: 264 SAKELIQHQFL 274
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
F A+ + S R GTP +++PEV+ ++ YG VDIW+ G++ ++ G PP+ +E+
Sbjct: 163 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP 222
Query: 304 HR 305
R
Sbjct: 223 LR 224
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 37/241 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPN-IVRLHDSI 58
G+F V +K T +A KI+ + D + E R+ L P + +LH
Sbjct: 30 GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCF 89
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + Y V + V GG+L I + E A +I + H G+++RDLK +
Sbjct: 90 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLD 149
Query: 119 NLLLASKAKGAAVKLADFGL--------------------------AIEVQGEQQAW--F 150
N++L S+ +K+ADFG+ A + G+ W +
Sbjct: 150 NVMLDSEGH---IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAY 206
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L G PPF ED+ L+ I YP +++ EA ++ ++T +P+KR
Sbjct: 207 GVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKR 262
Query: 211 I 211
+
Sbjct: 263 L 263
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 252 VSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
V+TR+ F GTP Y++PE++ +PYGK VD WA GV+LY +L G PPF ED+ L+ I
Sbjct: 175 VTTRE-FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 232
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 62/241 (25%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ- 96
RE + ++L HPNIV L D I E LVF+ + + ++ D+ I
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYL 125
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA----IEVQGEQQA--- 148
Q+L V HCH + ++HRDLKP+NLL+ S A+KLADFGLA I V+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 149 -WF---------------------GVILYILLVGYPPF---WDEDQ------------HR 171
W+ G I ++ G P F D+DQ R
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPR 242
Query: 172 LYAQI------KAGAYD-YPSPEWDTVTP----EAKNLINQMLTVNPSKRITASEALKHP 220
+ Q+ K + + W ++ P E +L++ ML +P+KRI+A +A+ HP
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 221 W 221
+
Sbjct: 303 Y 303
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 264 YLSPEVLK-KEPYGKPVDIWACGVILYILLVGYPPF---WDEDQ 303
Y +P+VL + Y VDIW+ G I ++ G P F D+DQ
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 106/241 (43%), Gaps = 62/241 (25%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ- 96
RE + ++L HPNIV L D I E LVF+ + + ++ D+ I
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYL 125
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA----IEVQGEQQA--- 148
Q+L V HCH + ++HRDLKP+NLL+ S A+KLADFGLA I V+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSD---GALKLADFGLARAFGIPVRSYTHEVVT 182
Query: 149 -WF---------------------GVILYILLVGYPPF---WDEDQ------------HR 171
W+ G I ++ G P F D+DQ R
Sbjct: 183 LWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPR 242
Query: 172 LYAQI------KAGAYD-YPSPEWDTVTP----EAKNLINQMLTVNPSKRITASEALKHP 220
+ Q+ K + + W ++ P E +L++ ML +P+KRI+A +A+ HP
Sbjct: 243 EWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 221 W 221
+
Sbjct: 303 Y 303
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Query: 264 YLSPEVLK-KEPYGKPVDIWACGVILYILLVGYPPF---WDEDQ 303
Y +P+VL + Y VDIW+ G I ++ G P F D+DQ
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQH----PNIVRLHD 56
G F V C + TG +A K ++ K++ + + L RI L P IV +
Sbjct: 199 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 258
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + + DL+ GG+L + +SEAD +I+ + H H+ VV+RDLK
Sbjct: 259 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 318
Query: 117 PENLLLASKAKGAAVKLADFGLAIEVQGEQ-------------------------QAWF- 150
P N+LL V+++D GLA + ++ WF
Sbjct: 319 PANILLDEHGH---VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 375
Query: 151 -GVILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
G +L+ LL G+ PF +D+H + A + P D+ +PE ++L+ +L +
Sbjct: 376 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRD 431
Query: 207 PSKRI 211
++R+
Sbjct: 432 VNRRL 436
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 260 GTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF 298
GT GY++PEVL+K Y D ++ G +L+ LL G+ PF
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQH----PNIVRLHD 56
G F V C + TG +A K ++ K++ + + L RI L P IV +
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + + DL+ GG+L + +SEAD +I+ + H H+ VV+RDLK
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 117 PENLLLASKAKGAAVKLADFGLAIEVQGEQ-------------------------QAWF- 150
P N+LL V+++D GLA + ++ WF
Sbjct: 320 PANILLDEHGH---VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 151 -GVILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
G +L+ LL G+ PF +D+H + A + P D+ +PE ++L+ +L +
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRD 432
Query: 207 PSKRI 211
++R+
Sbjct: 433 VNRRL 437
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 260 GTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF 298
GT GY++PEVL+K Y D ++ G +L+ LL G+ PF
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL----QHPNIVRLHD 56
G F V C + TG +A K ++ K++ + + L RI L P IV +
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + + DL+ GG+L + +SEAD +I+ + H H+ VV+RDLK
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 117 PENLLLASKAKGAAVKLADFGLAIEVQGEQ-------------------------QAWF- 150
P N+LL V+++D GLA + ++ WF
Sbjct: 320 PANILLDEHGH---VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 151 -GVILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
G +L+ LL G+ PF +D+H + A + P D+ +PE ++L+ +L +
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRD 432
Query: 207 PSKRI 211
++R+
Sbjct: 433 VNRRL 437
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 259 AGTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF 298
GT GY++PEVL+K Y D ++ G +L+ LL G+ PF
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 41/245 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL----QHPNIVRLHD 56
G F V C + TG +A K ++ K++ + + L RI L P IV +
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
+ + + DL+ GG+L + +SEAD +I+ + H H+ VV+RDLK
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 117 PENLLLASKAKGAAVKLADFGLAIEVQGEQ-------------------------QAWF- 150
P N+LL V+++D GLA + ++ WF
Sbjct: 320 PANILLDEHGH---VRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 151 -GVILYILLVGYPPFWD---EDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
G +L+ LL G+ PF +D+H + A + P D+ +PE ++L+ +L +
Sbjct: 377 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRD 432
Query: 207 PSKRI 211
++R+
Sbjct: 433 VNRRL 437
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 259 AGTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF 298
GT GY++PEVL+K Y D ++ G +L+ LL G+ PF
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 115/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V +GL+ A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 62 GAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 121
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 122 ATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 179
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 180 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIW 236
Query: 151 --GVILYILLVGYPPFWDEDQHRLYAQI------------------KAGAYDYPSPE--- 187
G I+ LL G F D QI +A Y P+
Sbjct: 237 SVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPK 296
Query: 188 ------WDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ P A +L+ +ML ++ KRITASEAL HP+ Q
Sbjct: 297 RNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
G+ T Y +PE+ L Y VDIW+ G I+ LL G F D QI
Sbjct: 210 GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V + K T + AAK+I+TK S + + E I HPNIV+L D+
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
EN +++ + GG + D V E +E+ +Q L+++N+ H N ++HRDLK
Sbjct: 106 ENNLWILIEFCAGGAV--DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 118 ENLLLASKAKGAAVKLADFGLAIEVQGEQQ---AWFGVILYILLVGYPPFWDEDQHRLYA 174
N+L +KLADFG++ + Q ++ G P+W + +
Sbjct: 164 GNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGT----------PYWMAPEVVMCE 210
Query: 175 QIKAGAYDYPSPEW 188
K YDY + W
Sbjct: 211 TSKDRPYDYKADVW 224
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 245 NARRKLKVSTRQGFAGTPGYLSPEVL-----KKEPYGKPVDIWACGVILYILLVGYPPFW 299
+A+ + R F GTP +++PEV+ K PY D+W+ G+ L + PP
Sbjct: 182 SAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 300 DEDQHRLYAQI 310
+ + R+ +I
Sbjct: 242 ELNPMRVLLKI 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 23/194 (11%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V + K T + AAK+I+TK S + + E I HPNIV+L D+
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
EN +++ + GG + D V E +E+ +Q L+++N+ H N ++HRDLK
Sbjct: 106 ENNLWILIEFCAGGAV--DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 118 ENLLLASKAKGAAVKLADFGLAIEVQGEQQ---AWFGVILYILLVGYPPFWDEDQHRLYA 174
N+L +KLADFG++ + Q ++ G P+W + +
Sbjct: 164 GNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGT----------PYWMAPEVVMCE 210
Query: 175 QIKAGAYDYPSPEW 188
K YDY + W
Sbjct: 211 TSKDRPYDYKADVW 224
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 245 NARRKLKVSTRQGFAGTPGYLSPEVL-----KKEPYGKPVDIWACGVILYILLVGYPPFW 299
+A+ + R F GTP +++PEV+ K PY D+W+ G+ L + PP
Sbjct: 182 SAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 300 DEDQHRLYAQI 310
+ + R+ +I
Sbjct: 242 ELNPMRVLLKI 252
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 36 LEREARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGG--ELFEDIVAREF-YSEAD 90
+++E ++ R+L+H N+++L D + +E+ Y+V + G E+ + + + F +A
Sbjct: 53 VKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAH 112
Query: 91 ASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV-------- 142
C Q+++ + + HS G+VH+D+KP NLLL + G +K++ G+A +
Sbjct: 113 GYFC--QLIDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVAEALHPFAADDT 167
Query: 143 ----QGEQ-------------------QAWF-GVILYILLVGYPPFWDEDQHRLYAQIKA 178
QG W GV LY + G PF ++ ++L+ I
Sbjct: 168 CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK 227
Query: 179 GAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
G+Y P P +L+ ML P+KR + + +H W
Sbjct: 228 GSYAIPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 55/139 (39%), Gaps = 24/139 (17%)
Query: 199 INQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKK-----FNARRKLKVS 253
+ +ML P KR +A H + CQ +H Q V K LK+S
Sbjct: 94 MQEMLDSVPEKRFPVCQA--HGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS 151
Query: 254 ---------------TRQGFAGTPGYLSPEVLK--KEPYGKPVDIWACGVILYILLVGYP 296
T + G+P + PE+ G VDIW+ GV LY + G
Sbjct: 152 ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211
Query: 297 PFWDEDQHRLYAQIKAGAY 315
PF ++ ++L+ I G+Y
Sbjct: 212 PFEGDNIYKLFENIGKGSY 230
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 121/276 (43%), Gaps = 48/276 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V+ KA+ +A K+++ ++ R E R I P +V+L + Q
Sbjct: 86 GAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ 145
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++ Y Y+V + + GG+L ++++ E A +++ +++ HS G++HRD+KP+N
Sbjct: 146 DDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 204
Query: 120 LLLASKAKGAAVKLADFGLAIEVQ-------------------------------GEQQA 148
+LL K +KLADFG +++ G +
Sbjct: 205 MLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECD 261
Query: 149 WF--GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
W+ GV L+ +LVG PF+ + Y++I PE ++ AKNLI LT
Sbjct: 262 WWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLTDR 321
Query: 207 PSK--RITASEALKHP--------WICQRERVASIV 232
+ R E +HP W RE A +V
Sbjct: 322 EVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVV 357
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 36/69 (52%), Gaps = 12/69 (17%)
Query: 260 GTPGYLSPEVLKKEP----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
GTP Y+SPEVLK + YG+ D W+ GV L+ +LVG PF YA G Y
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF--------YADSLVGTY 288
Query: 316 DDEPKHKSA 324
HK++
Sbjct: 289 SKIMDHKNS 297
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 32/164 (19%)
Query: 33 FQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS 92
++ ERE +L H NIV + D +E++ +YLV + + G L E I + S A
Sbjct: 55 LKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAI 114
Query: 93 HCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA------------- 139
+ QIL+ + H H +VHRD+KP+N+L+ S +K+ DFG+A
Sbjct: 115 NFTNQILDGIKHAHDMRIVHRDIKPQNILIDS---NKTLKIFDFGIAKALSETSLTQTNH 171
Query: 140 ----IEVQGEQQA------------WFGVILYILLVGYPPFWDE 167
++ +QA G++LY +LVG PPF E
Sbjct: 172 VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
GT Y SPE K E + DI++ G++LY +LVG PPF E
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V + K T + AAK+I+TK S + + E I HPNIV+L D+
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 105
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
EN +++ + GG + D V E +E+ +Q L+++N+ H N ++HRDLK
Sbjct: 106 ENNLWILIEFCAGGAV--DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 163
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+L +KLADFG++
Sbjct: 164 GNILFTLDGD---IKLADFGVS 182
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 245 NARRKLKVSTRQGFAGTPGYLSPEVL-----KKEPYGKPVDIWACGVILYILLVGYPPFW 299
+A+ + R F GTP +++PEV+ K PY D+W+ G+ L + PP
Sbjct: 182 SAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH 241
Query: 300 DEDQHRLYAQI 310
+ + R+ +I
Sbjct: 242 ELNPMRVLLKI 252
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 40/203 (19%)
Query: 48 HPNIVRLHDSIQEENYHYLVFDL-VTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
HP ++RL D + + LV + + +LF+ I + E + Q++ ++ HCH
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH 156
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAWF---------------- 150
S GVVHRD+K EN+L+ + +G A KL DFG + E F
Sbjct: 157 SRGVVHRDIKDENILIDLR-RGCA-KLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQ 214
Query: 151 -----------GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLI 199
G++LY ++ G PF + DQ L A++ A+ V+P+ LI
Sbjct: 215 YHALPATVWSLGILLYDMVCGDIPF-ERDQEILEAELHFPAH---------VSPDCCALI 264
Query: 200 NQMLTVNPSKRITASEALKHPWI 222
+ L PS R + E L PW+
Sbjct: 265 RRCLAPKPSSRPSLEEILLDPWM 287
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + L F GT Y PE + + Y P +W+ G++LY ++ G PF
Sbjct: 181 LIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF- 239
Query: 300 DEDQHRLYAQIKAGAY 315
+ DQ L A++ A+
Sbjct: 240 ERDQEILEAELHFPAH 255
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDXE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICR-KLQHPNIVRLHDSI 58
G+F V K T FA K + L D + E R+ +HP + + +
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + + V + + GG+L I + + + A+ +I+ + HS G+V+RDLK +
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 119 NLLLASKAKGAAVKLADFGLAIE-VQGEQQA-------------------------W--F 150
N+LL K +K+ADFG+ E + G+ + W F
Sbjct: 148 NILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L+G PF +D+ L+ I+ Y P W + EAK+L+ ++ P KR
Sbjct: 205 GVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY--PRW--LEKEAKDLLVKLFVREPEKR 260
Query: 211 ITASEALK-HP 220
+ ++ HP
Sbjct: 261 LGVRGDIRQHP 271
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
F GTP Y++PE+L + Y VD W+ GV+LY +L+G PF +D+ L+ I+
Sbjct: 178 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V + K T + AAK+I+TK S + + E I HPNIV+L D+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY 78
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
EN +++ + GG + D V E +E+ +Q L+++N+ H N ++HRDLK
Sbjct: 79 ENNLWILIEFCAGGAV--DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+L +KLADFG++
Sbjct: 137 GNILFTLDGD---IKLADFGVS 155
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 249 KLKVSTRQGFAGTPGYLSPEVL-----KKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
+ + R F GTP +++PEV+ K PY D+W+ G+ L + PP + +
Sbjct: 160 RTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
Query: 304 HRLYAQI 310
R+ +I
Sbjct: 220 MRVLLKI 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 95 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + ++ +K+ DFGLA E W+
Sbjct: 153 LKPSNLAVNEDSE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 111/251 (44%), Gaps = 38/251 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICR-KLQHPNIVRLHDSI 58
G+F V K T FA K + L D + E R+ +HP + + +
Sbjct: 29 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 88
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + + V + + GG+L I + + + A+ +I+ + HS G+V+RDLK +
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 119 NLLLASKAKGAAVKLADFGLAIE-VQGEQQA-------------------------W--F 150
N+LL K +K+ADFG+ E + G+ + W F
Sbjct: 149 NILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSF 205
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L+G PF +D+ L+ I+ Y P W + EAK+L+ ++ P KR
Sbjct: 206 GVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY--PRW--LEKEAKDLLVKLFVREPEKR 261
Query: 211 ITASEALK-HP 220
+ ++ HP
Sbjct: 262 LGVRGDIRQHP 272
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
F GTP Y++PE+L + Y VD W+ GV+LY +L+G PF +D+ L+ I+
Sbjct: 179 FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 21/148 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKL-----EREARICRKLQHPNIVRLH 55
G++ +V +C K TG +I+ KK D K+ RE ++ ++L+H N+V L
Sbjct: 36 GSYGMVMKCRNKDTG-----RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLL 90
Query: 56 DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----QILESVNHCHSNGVV 111
+ +++ YLVF+ V + +D+ E + +Q QI+ + CHS+ ++
Sbjct: 91 EVCKKKKRWYLVFEFVDH-TILDDL---ELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRD+KPEN+L+ ++ VKL DFG A
Sbjct: 147 HRDIKPENILV---SQSGVVKLCDFGFA 171
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 259 AGTPGYLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF-WDEDQHRLY 307
T Y +PE+L + YGK VD+WA G ++ + +G P F D D +LY
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 99 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + ++ +K+ DFGLA E W+
Sbjct: 157 LKPSNLAVNEDSE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 122/298 (40%), Gaps = 86/298 (28%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVRLH- 55
GA+ VV K TG +I+ KK+ D + RE +I + +H NI+ +
Sbjct: 22 GAYGVVCSATHKPTG-----EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 56 ----DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
DS + N Y++ +L+ +++ + S+ + I Q L +V H + V+
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA----------IEVQGEQQA--------WF--- 150
HRDLKP NLL+ S +K+ DFGLA E G+Q W+
Sbjct: 135 HRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAP 191
Query: 151 ------------------GVILYILLVGYPPFWDED-QHRL---YAQIKAGAYD------ 182
G IL L + P F D +H+L + I D
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 183 --------------YPSPEWDT----VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
YP+ + V P+ +L+ +ML +P+KRITA EAL+HP++
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED-QHRL 306
F T Y +PEV L Y + +D+W+CG IL L + P F D +H+L
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 122/298 (40%), Gaps = 86/298 (28%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVRLH- 55
GA+ VV K TG +I+ KK+ D + RE +I + +H NI+ +
Sbjct: 22 GAYGVVCSATHKPTG-----EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 56 ----DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
DS + N Y++ +L+ +++ + S+ + I Q L +V H + V+
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA----------IEVQGEQQA--------WF--- 150
HRDLKP NLL+ S +K+ DFGLA E G+Q W+
Sbjct: 135 HRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAP 191
Query: 151 ------------------GVILYILLVGYPPFWDED-QHRL---YAQIKAGAYD------ 182
G IL L + P F D +H+L + I D
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 183 --------------YPSPEWDT----VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
YP+ + V P+ +L+ +ML +P+KRITA EAL+HP++
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED-QHRL 306
+ T Y +PEV L Y + +D+W+CG IL L + P F D +H+L
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 122/298 (40%), Gaps = 86/298 (28%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD----FQKLEREARICRKLQHPNIVRLH- 55
GA+ VV K TG +I+ KK+ D + RE +I + +H NI+ +
Sbjct: 22 GAYGVVCSATHKPTG-----EIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 56 ----DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
DS + N Y++ +L+ +++ + S+ + I Q L +V H + V+
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVI 134
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA----------IEVQGEQQA--------WF--- 150
HRDLKP NLL+ S +K+ DFGLA E G+Q W+
Sbjct: 135 HRDLKPSNLLINSNCD---LKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAP 191
Query: 151 ------------------GVILYILLVGYPPFWDED-QHRL---YAQIKAGAYD------ 182
G IL L + P F D +H+L + I D
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCI 251
Query: 183 --------------YPSPEWDT----VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
YP+ + V P+ +L+ +ML +P+KRITA EAL+HP++
Sbjct: 252 ESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL 309
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 259 AGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED-QHRL 306
T Y +PEV L Y + +D+W+CG IL L + P F D +H+L
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 105 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 163 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 98 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 156 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 53 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 113 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 171 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 287
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 116 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 174 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 231 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 290
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 291 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 31 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 90
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 91 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 148
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 149 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 206 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 265
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 266 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 52 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 111
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 112 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 170 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 227 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 286
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 287 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 105 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 163 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 56 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 115
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 116 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 173
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 174 LKPSNLAVNEDCE---LKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIW 230
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 231 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 290
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 291 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 204 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + ++ +K+ DFGL E W+
Sbjct: 151 LKPSNLAVNEDSE---LKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 45 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 104
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 105 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 162
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 163 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 220 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 279
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 280 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 103
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 104 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 162 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 219 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 278
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 279 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 44 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 103
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 104 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 161
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 162 LKPSNLAVNEDXE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 219 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 278
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 279 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 192 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 100 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 158 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 95 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 153 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 89
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 90 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 148 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 205 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 264
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 265 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 29 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 89 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 147 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 95 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 153 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 30 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 89
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 90 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 148 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 205 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 264
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 265 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 178 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 35 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 94
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 95 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 152
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 153 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 210 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 269
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 270 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 183 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 99 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 157 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 39 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 99 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 157 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 273
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 98 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 156 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 32 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 91
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 92 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 149
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 150 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 206
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 207 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 266
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 267 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 180 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 98 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 156 LKPSNLAVNEDXE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 116/287 (40%), Gaps = 77/287 (26%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLE----REARICRKLQHPNIVRLHD 56
G++ VV +C + TG A K K L + D ++ RE R+ ++L+HPN+V L +
Sbjct: 14 GSYGVVFKCRNRDTGQIVAIK----KFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----QILESVNHCHSNGVVH 112
+ + +LVF+ L E + Y H ++ Q L++VN CH + +H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHE----LDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ--------AWF-------------- 150
RD+KPEN+L+ K + +KL DFG A + G W+
Sbjct: 126 RDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 151 -------GVILYILLVGYPPFW--DEDQHRLYAQIKA------------------GAYDY 183
G + LL G P W D +LY K
Sbjct: 183 PVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKI 241
Query: 184 PSPE--------WDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
P PE + ++ A L+ L ++P++R+T + L HP+
Sbjct: 242 PDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF 288
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 259 AGTPGYLSPEVLKKEP-YGKPVDIWACGVILYILLVGYPPFW--DEDQHRLYAQIKAGAY 315
T Y SPE+L + YG PVD+WA G + LL G P W D +LY I+
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGV-PLWPGKSDVDQLYL-IRKTLG 220
Query: 316 DDEPKHKSA 324
D P+H+
Sbjct: 221 DLIPRHQQV 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 100 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 158 LKPSNLAVNEDCE---LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 38 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 97
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 98 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 155
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 156 LKPSNLAVNEDXE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 186 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 100 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 158 LKPSNLAVNEDCE---LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 40 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 100 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 157
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 158 LKPSNLAVNEDCE---LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 188 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARI-CRKLQHPNIVRLHDSI 58
G+F V +K T +A KI+ + D + E R+ + P + +LH
Sbjct: 31 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + Y V + V GG+L I + E A +I + S G+++RDLK +
Sbjct: 91 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLD 150
Query: 119 NLLLASKAKGAAVKLADFGL--------------------------AIEVQGEQQAW--F 150
N++L S+ +K+ADFG+ A + G+ W F
Sbjct: 151 NVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L G PF ED+ L+ I YP +++ EA + ++T +P KR
Sbjct: 208 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKR 263
Query: 211 I 211
+
Sbjct: 264 L 264
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
T + F GTP Y++PE++ +PYGK VD WA GV+LY +L G PF ED+ L+ I
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARI-CRKLQHPNIVRLHDSI 58
G+F V +K T +A KI+ + D + E R+ + P + +LH
Sbjct: 352 GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q + Y V + V GG+L I + E A +I + S G+++RDLK +
Sbjct: 412 QTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLD 471
Query: 119 NLLLASKAKGAAVKLADFGL--------------------------AIEVQGEQQAW--F 150
N++L S+ +K+ADFG+ A + G+ W F
Sbjct: 472 NVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
GV+LY +L G PF ED+ L+ I YP +++ EA + ++T +P KR
Sbjct: 529 GVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKR 584
Query: 211 I 211
+
Sbjct: 585 L 585
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
T + F GTP Y++PE++ +PYGK VD WA GV+LY +L G PF ED+ L+ I
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 117/281 (41%), Gaps = 65/281 (23%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V + K +G + A K ++ S ++ RE + + +QH N++ L D
Sbjct: 53 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 112
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++ YLV + + I+ EF SE + + Q+L+ + + HS GVVHRD
Sbjct: 113 ASSLRNFYDFYLVMPFMQTD--LQKIMGMEF-SEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 170 LKPGNLAVNEDCE---LKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 226
Query: 151 --GVILYILLVGYPPFWDEDQHRLYAQI------------------KAGAYDYPSPE--- 187
G I+ +L G F +D QI A +Y P+
Sbjct: 227 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 286
Query: 188 ------WDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ +P+A +L+ +ML ++ KR+TA++AL HP+
Sbjct: 287 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
G+ T Y +PEV L Y + VDIW+ G I+ +L G F +D QI
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 102/252 (40%), Gaps = 70/252 (27%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVFDLVTGG-ELFEDIVAREFYSE 88
RE + R+L+ HPN+VRL D E LVF+ V + D
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
++Q L ++ H+N +VHRDLKPEN+L+ S G VKLADFGLA + Q A
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLA-RIYSYQMA 167
Query: 149 WFGVILYIL-------------------------------------------------LV 159
F V++ + L+
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 160 GYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDTVTPEAK----NLINQMLTVNPSKRITAS 214
G PP ED + GA+ P +V PE + L+ +MLT NP KRI+A
Sbjct: 228 GLPP---EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 215 EALKHPWICQRE 226
AL+H ++ + E
Sbjct: 285 RALQHSYLHKDE 296
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQ-HRLYAQIKAGAYDDEP 319
Y +PEVL + Y PVD+W+ G I + P F + DQ +++ I DD P
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 320 KHKS 323
+ S
Sbjct: 237 RDVS 240
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 117/283 (41%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ D+GLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAFS V K TG +A KI+N + R RE R + I +LH + Q
Sbjct: 72 GAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131
Query: 60 EENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ENY YLV + GG+L + E A + +I+ +++ H G VHRD+KP+
Sbjct: 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPD 191
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVGYPPF 164
N+LL + ++LADFG ++++ + G + ++ VG P +
Sbjct: 192 NILL---DRCGHIRLADFGSCLKLRAD-----GTVRSLVAVGTPDY 229
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 260 GTPGYLSPEVLKK-------EPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
GTP YLSPE+L+ YG D WA GV Y + G PF+ + Y +I
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + Q G FA K I +K RE I ++L+H NIV+L+D I
Sbjct: 13 GTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 61 ENYHYLVF-----------DLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG 109
+ LVF D+ GG E + A+ F + Q+L + +CH
Sbjct: 72 KKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLLNGIAYCHDRR 120
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
V+HRDLKP+NLL+ + + +K+ADFGLA
Sbjct: 121 VLHRDLKPQNLLINREGE---LKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + Q G FA K I +K RE I ++L+H NIV+L+D I
Sbjct: 13 GTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 61 ENYHYLVF-----------DLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG 109
+ LVF D+ GG E + A+ F + Q+L + +CH
Sbjct: 72 KKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLLNGIAYCHDRR 120
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
V+HRDLKP+NLL+ + + +K+ADFGLA
Sbjct: 121 VLHRDLKPQNLLINREGE---LKIADFGLA 147
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + VV + Q G FA K I +K RE I ++L+H NIV+L+D I
Sbjct: 13 GTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT 71
Query: 61 ENYHYLVF-----------DLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG 109
+ LVF D+ GG E + A+ F + Q+L + +CH
Sbjct: 72 KKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLLNGIAYCHDRR 120
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
V+HRDLKP+NLL+ + + +K+ADFGLA
Sbjct: 121 VLHRDLKPQNLLINREGE---LKIADFGLA 147
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 102/250 (40%), Gaps = 78/250 (31%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLV----------TGGELFEDIVAREFYS 87
RE + ++L+H NIVRLHD + + LVF+ G+L +IV +
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF- 108
Query: 88 EADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA----IEVQ 143
Q+L+ + CHS V+HRDLKP+NLL+ + +KLA+FGLA I V+
Sbjct: 109 ---------QLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVR 156
Query: 144 G-----------EQQAWFGVILYILLV---------------GYPPF----WDEDQHRLY 173
FG LY + G P F D+ R++
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF 216
Query: 174 AQIKAGAY----------DY-PSPEWDTVTP----------EAKNLINQMLTVNPSKRIT 212
+ DY P P + T ++L+ +L NP +RI+
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 213 ASEALKHPWI 222
A EAL+HP+
Sbjct: 277 AEEALQHPYF 286
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 113 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 171 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 287
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 201 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 52 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 111
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 112 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 170 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 227 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 286
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 287 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 200 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 242
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ FGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 89 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 147 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 53 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 112
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 113 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 171 LKPSNLAVNEDCE---LKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIW 227
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 228 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 287
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 288 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 201 GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 243
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 65/281 (23%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V + K +G + A K ++ S ++ RE + + +QH N++ L D
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 94
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++ YLV + + I+ +F SE + + Q+L+ + + HS GVVHRD
Sbjct: 95 ASSLRNFYDFYLVMPFMQTD--LQKIMGLKF-SEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 152 LKPGNLAVNEDCE---LKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 208
Query: 151 --GVILYILLVGYPPFWDEDQHRLYAQI------------------KAGAYDYPSPE--- 187
G I+ +L G F +D QI A +Y P+
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 188 ------WDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ +P+A +L+ +ML ++ KR+TA++AL HP+
Sbjct: 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
G+ T Y +PEV L Y + VDIW+ G I+ +L G F +D QI
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ YLV L+ G +L++ ++ + S
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYK-LLKTQHLSN 143
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDH 200
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 261 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 320
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 321 RIEVEQALAHPYLEQ 335
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 43 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 102
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 103 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 160
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 161 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 217
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 218 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 277
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 278 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 191 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
GF T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 107/257 (41%), Gaps = 57/257 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
F + + K++ F +RE ++ R+ +HPN++R + ++ + Y+ +L
Sbjct: 46 FDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA--- 102
Query: 77 FEDIVAREFYSEADASHC-------IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGA 129
+E+ + D +H +QQ + H HS +VHRDLKP N+L++
Sbjct: 103 ----TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Query: 130 AVK--LADFGLAIEVQGEQ------------QAWFG-----------------------V 152
+K ++DFGL ++ + + W V
Sbjct: 159 KIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKNLINQMLTVNPSKR 210
Y++ G PF Q + + A + D +P D + A+ LI +M+ ++P KR
Sbjct: 219 FYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI---ARELIEKMIAMDPQKR 275
Query: 211 ITASEALKHPWICQRER 227
+A LKHP+ E+
Sbjct: 276 PSAKHVLKHPFFWSLEK 292
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 241 LKKFNARRKLKV-----STRQGFAGTPGYLSPEVLKKEPYGKP---VDIWACGVILYILL 292
+ F +KL V S R G GT G+++PE+L ++ P VDI++ G + Y ++
Sbjct: 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223
Query: 293 V-GYPPFWDEDQHRLYAQIKAGA 314
G PF Q + A I GA
Sbjct: 224 SEGSHPFGKSLQRQ--ANILLGA 244
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
GF T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 89 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 147 LKPSNLAVNEDCE---LKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
GF T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 62/267 (23%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V + K TG AAK+I TK S + + E I HP IV+L +
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYH 87
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
+ +++ + GG + D + E +E +Q+LE++N HS ++HRDLK
Sbjct: 88 DGKLWIMIEFCPGGAV--DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 145
Query: 118 ENLLLASKAKGAAVKLADFGLA---IEVQGEQQAWFGVILYILLVGYPPFWDEDQHRLYA 174
N+L+ + ++LADFG++ ++ ++ ++ G P+W + +
Sbjct: 146 GNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGT----------PYWMAPEVVMCE 192
Query: 175 QIKAGAYDYPSPEWD----------------------------------TVTP-----EA 195
+K YDY + W +TP E
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 252
Query: 196 KNLINQMLTVNPSKRITASEALKHPWI 222
++ + L NP R +A++ L+HP++
Sbjct: 253 RDFLKIALDKNPETRPSAAQLLEHPFV 279
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 245 NARRKLKVSTRQGFAGTPGYLSPEV-----LKKEPYGKPVDIWACGVILYILLVGYPPFW 299
+A+ + R F GTP +++PEV +K PY DIW+ G+ L + PP
Sbjct: 164 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223
Query: 300 DEDQHRLYAQI 310
+ + R+ +I
Sbjct: 224 ELNPMRVLLKI 234
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 39 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 98
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 99 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 157 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 214 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 273
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 274 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 62/267 (23%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF V + K TG AAK+I TK S + + E I HP IV+L +
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYIVEIEILATCDHPYIVKLLGAYYH 79
Query: 61 ENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
+ +++ + GG + D + E +E +Q+LE++N HS ++HRDLK
Sbjct: 80 DGKLWIMIEFCPGGAV--DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKA 137
Query: 118 ENLLLASKAKGAAVKLADFGLA---IEVQGEQQAWFGVILYILLVGYPPFWDEDQHRLYA 174
N+L+ + ++LADFG++ ++ ++ ++ G P+W + +
Sbjct: 138 GNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGT----------PYWMAPEVVMCE 184
Query: 175 QIKAGAYDYPSPEWD----------------------------------TVTP-----EA 195
+K YDY + W +TP E
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEF 244
Query: 196 KNLINQMLTVNPSKRITASEALKHPWI 222
++ + L NP R +A++ L+HP++
Sbjct: 245 RDFLKIALDKNPETRPSAAQLLEHPFV 271
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 245 NARRKLKVSTRQGFAGTPGYLSPEV-----LKKEPYGKPVDIWACGVILYILLVGYPPFW 299
+A+ + R F GTP +++PEV +K PY DIW+ G+ L + PP
Sbjct: 156 SAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 215
Query: 300 DEDQHRLYAQI 310
+ + R+ +I
Sbjct: 216 ELNPMRVLLKI 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ D GLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ D GLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 115/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 29 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 88
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV ++ I QIL + + HS ++HRD
Sbjct: 89 ARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRD 146
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA E W+
Sbjct: 147 LKPSNLAVNEDCE---LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPK 263
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 177 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 224
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 116/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TGL A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ D GLA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 101/252 (40%), Gaps = 70/252 (27%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVFDLVTGG-ELFEDIVAREFYSE 88
RE + R+L+ HPN+VRL D E LVF+ V + D
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 119
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
++Q L ++ H+N +VHRDLKPEN+L+ S G VKLADFGLA + Q A
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLA-RIYSYQMA 175
Query: 149 WFGVILYIL-------------------------------------------------LV 159
V++ + L+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
Query: 160 GYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDTVTPEAK----NLINQMLTVNPSKRITAS 214
G PP ED + GA+ P +V PE + L+ +MLT NP KRI+A
Sbjct: 236 GLPP---EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 215 EALKHPWICQRE 226
AL+H ++ + E
Sbjct: 293 RALQHSYLHKDE 304
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQ-HRLYAQIKAGAYDDEP 319
Y +PEVL + Y PVD+W+ G I + P F + DQ +++ I DD P
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244
Query: 320 KHKS 323
+ S
Sbjct: 245 RDVS 248
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 101/252 (40%), Gaps = 70/252 (27%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVFDLVTGG-ELFEDIVAREFYSE 88
RE + R+L+ HPN+VRL D E LVF+ V + D
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
++Q L ++ H+N +VHRDLKPEN+L+ S G VKLADFGLA + Q A
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLA-RIYSYQMA 167
Query: 149 WFGVILYIL-------------------------------------------------LV 159
V++ + L+
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 160 GYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDTVTPEAK----NLINQMLTVNPSKRITAS 214
G PP ED + GA+ P +V PE + L+ +MLT NP KRI+A
Sbjct: 228 GLPP---EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 215 EALKHPWICQRE 226
AL+H ++ + E
Sbjct: 285 RALQHSYLHKDE 296
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQ-HRLYAQIKAGAYDDEP 319
Y +PEVL + Y PVD+W+ G I + P F + DQ +++ I DD P
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 320 KHKS 323
+ S
Sbjct: 237 RDVS 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 52/246 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V K T +A KI+N ++ R RE R + I LH + Q
Sbjct: 101 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 160
Query: 60 EENYHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
+EN+ YLV D GG+L FED + + A I +++ +++ H VHR
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM-----ARFYIGEMVLAIDSIHQLHYVHR 215
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQ------------------------------ 143
D+KP+N+LL ++LADFG +++
Sbjct: 216 DIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 144 --GEQQAWF--GVILYILLVGYPPFWDEDQHRLYAQIKAGA--YDYPSPEWDTVTPEAKN 197
G + W+ GV +Y +L G PF+ E Y +I + +PS D V+ EAK+
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD-VSEEAKD 331
Query: 198 LINQML 203
LI +++
Sbjct: 332 LIQRLI 337
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 259 AGTPGYLSPEVLKKEP-----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
GTP Y+SPE+L+ YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 52/246 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V K T +A KI+N ++ R RE R + I LH + Q
Sbjct: 85 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 144
Query: 60 EENYHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
+EN+ YLV D GG+L FED + + A I +++ +++ H VHR
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDM-----ARFYIGEMVLAIDSIHQLHYVHR 199
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQ------------------------------ 143
D+KP+N+LL ++LADFG +++
Sbjct: 200 DIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 144 --GEQQAWF--GVILYILLVGYPPFWDEDQHRLYAQIKAGA--YDYPSPEWDTVTPEAKN 197
G + W+ GV +Y +L G PF+ E Y +I + +PS D V+ EAK+
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTD-VSEEAKD 315
Query: 198 LINQML 203
LI +++
Sbjct: 316 LIQRLI 321
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 259 AGTPGYLSPEVLKKEP-----YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
GTP Y+SPE+L+ YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 78/250 (31%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLV----------TGGELFEDIVAREFYS 87
RE + ++L+H NIVRLHD + + LVF+ G+L +IV +
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF- 108
Query: 88 EADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA----IEVQ 143
Q+L+ + CHS V+HRDLKP+NLL+ + +KLADFGLA I V+
Sbjct: 109 ---------QLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVR 156
Query: 144 G-----------EQQAWFGVILYILLVGY---------------PPFWDEDQHRLYAQIK 177
FG LY + P F D +I
Sbjct: 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIF 216
Query: 178 AGAYDYPSPEWDTVT-----------PEAKNLIN--------------QMLTVNPSKRIT 212
+W ++T P +L+N +L NP +RI+
Sbjct: 217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS 276
Query: 213 ASEALKHPWI 222
A EAL+HP+
Sbjct: 277 AEEALQHPYF 286
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 125
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 182
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 243 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 302
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 303 RIEVEQALAHPYLAQ 317
Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 68 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 125
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 182
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 243 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 302
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 303 RIEVEQALAHPYLEQ 317
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 123
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 180
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 241 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 301 RIEVEQALAHPYLEQ 315
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 68 QRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 125
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + + +K+ DFGLA
Sbjct: 126 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLARVADPDHDH 182
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 183 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 242
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 243 LGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 302
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 303 RIEVEQALAHPYLAQ 317
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 86 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 143
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 200
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 261 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 320
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 321 RIEVEQALAHPYLEQ 335
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 64 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 121
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 122 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 178
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 239 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 298
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 299 RIEVEQALAHPYLEQ 313
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 123
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDH 180
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 241 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 301 RIEVEQALAHPYLEQ 315
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 101/252 (40%), Gaps = 70/252 (27%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVFDLVTGG-ELFEDIVAREFYSE 88
RE + R+L+ HPN+VRL D E LVF+ V + D
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPA 111
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
++Q L ++ H+N +VHRDLKPEN+L+ S G VKLADFGLA + Q A
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLA-RIYSYQMA 167
Query: 149 WFGVILYIL-------------------------------------------------LV 159
V++ + L+
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 227
Query: 160 GYPPFWDEDQHRLYAQIKAGAYDYPSPE-WDTVTPEAK----NLINQMLTVNPSKRITAS 214
G PP ED + GA+ P +V PE + L+ +MLT NP KRI+A
Sbjct: 228 GLPP---EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 284
Query: 215 EALKHPWICQRE 226
AL+H ++ + E
Sbjct: 285 RALQHSYLHKDE 296
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFW---DEDQ-HRLYAQIKAGAYDDEP 319
Y +PEVL + Y PVD+W+ G I + P F + DQ +++ I DD P
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 320 KHKS 323
+ S
Sbjct: 237 RDVS 240
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 123
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDH 180
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 241 LGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 301 RIEVEQALAHPYLEQ 315
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 64 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 121
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 122 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 178
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 179 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 238
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 239 LGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 298
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 299 RIEVEQALAHPYLEQ 313
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 74 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 131
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 132 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 188
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 189 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 248
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 249 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 308
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 309 RIEVEQALAHPYLEQ 323
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 123
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 180
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 241 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 301 RIEVEQALAHPYLEQ 315
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 66 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 123
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 124 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDH 180
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 181 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 240
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 241 LGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 301 RIEVEQALAHPYLEQ 315
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 71 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 128
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 129 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 185
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 186 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 246 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 305
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 306 RIEVEQALAHPYLEQ 320
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 72 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 129
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 130 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 186
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 187 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 246
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 247 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 306
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 307 RIEVEQALAHPYLEQ 321
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 63 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 120
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 121 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 177
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 178 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 237
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 238 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 297
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 298 RIEVEQALAHPYLEQ 312
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 111/281 (39%), Gaps = 64/281 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V V TG + A K + S ++ RE R+ + ++H N++ L D
Sbjct: 36 GAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTP 95
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
++ + YLV + G ++ E E + Q+L+ + + H+ G++HRD
Sbjct: 96 DETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRD 153
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DFGLA + E W+
Sbjct: 154 LKPGNLAVNEDCE---LKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 151 --GVILYILLVGYPPFWDEDQHRLYAQI------------------KAGAYDYPSPEWD- 189
G I+ ++ G F D +I +A Y PE +
Sbjct: 211 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 270
Query: 190 --------TVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+P A NL+ +ML ++ +R+TA EAL HP+
Sbjct: 271 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 71/267 (26%)
Query: 23 INTKKLSARDFQKL------EREARICRKLQHPNIVRLHD------SIQEENYHYLVFDL 70
+ KKLS R FQ L RE R+ + L+H N++ L D SI++ + YLV L
Sbjct: 56 VAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ G +IV + S+ + Q+L + + HS G++HRDLKP N+ + ++
Sbjct: 115 M--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE--- 169
Query: 131 VKLADFGLAIEVQGEQQA-----WF---------------------GVILYILLVGYPPF 164
+++ DFGLA + E W+ G I+ LL G F
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 165 WDED---------------QHRLYAQIKAG-AYDY-----PSPEWDTVT------PEAKN 197
D + A+I + A Y P P+ D + P A +
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAID 289
Query: 198 LINQMLTVNPSKRITASEALKHPWICQ 224
L+ +ML ++ +R++A+EAL H + Q
Sbjct: 290 LLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 31.2 bits (69), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 108/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 19 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 76
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 77 RLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 137 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 194
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 195 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 244
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 245 LRPSDRPTFEEIQNHPWM 262
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 156 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 214
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 215 EHDEEIIRGQV 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 259 AGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 71 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 128
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 129 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 185
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 186 TGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 245
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 246 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 305
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 306 RIEVEQALAHPYLEQ 320
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 259 AGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 68/245 (27%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGG--ELFEDIVAREFYSEADASHCI 95
RE + + L+H NIV LHD I E LVF+ + + +D + + +
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD--CGNIINMHNVKLFL 106
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA---------------- 139
Q+L + +CH V+HRDLKP+NLL+ + + +KLADFGLA
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVT 163
Query: 140 ------------IEVQGEQQAW-FGVILYILLVGYPPF----WDEDQHRLY--------- 173
+ + W G I Y + G P F +E H ++
Sbjct: 164 LWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEE 223
Query: 174 ------AQIKAGAYDYP----------SPEWDTVTPEAKNLINQMLTVNPSKRITASEAL 217
+ + Y+YP +P D+ + +L+ ++L RI+A +A+
Sbjct: 224 TWPGILSNEEFKTYNYPKYRAEALLSHAPRLDS---DGADLLTKLLQFEGRNRISAEDAM 280
Query: 218 KHPWI 222
KHP+
Sbjct: 281 KHPFF 285
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH-----YLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H N++ + D ++ Y+V DL+ +L++ + +++ S
Sbjct: 86 QRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQL-SN 143
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ- 147
+ + QIL + + HS V+HRDLKP NLL+ + +K+ DFGLA E
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDH 200
Query: 148 ----------AWF---------------------GVILYILLVGYPPF-----WDEDQHR 171
W+ G IL +L P F D+ H
Sbjct: 201 TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 260
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTP----EAKNLINQMLTVNPSK 209
L +KA Y P W + P +A +L+++MLT NP+K
Sbjct: 261 LGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNK 320
Query: 210 RITASEALKHPWICQ 224
RIT EAL HP++ Q
Sbjct: 321 RITVEEALAHPYLEQ 335
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 264 YLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKTQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
GA + V R K TG FA K+ N L D Q RE + +KL H NIV+L +I+
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLNHKNIVKLF-AIE 76
Query: 60 EEN---YHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
EE + L+ + G L+ E+ E++ ++ ++ +NH NG+VHR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 114 DLKPENLLLASKAKGAAV-KLADFGLAIEVQGEQQ--AWFGVILYILLVGYPPFWDEDQH 170
++KP N++ G +V KL DFG A E++ ++Q + +G Y+ +P ++
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL----HPDMYERAVL 192
Query: 171 RLYAQIKAGA 180
R Q K GA
Sbjct: 193 RKDHQKKYGA 202
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 236 ETVDCLKKFNARRKLKVSTR-QGFAGTPGYLSPE-----VLKKE---PYGKPVDIWACGV 286
++V L F A R+L+ + GT YL P+ VL+K+ YG VD+W+ GV
Sbjct: 152 QSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 287 ILYILLVGYPPF 298
Y G PF
Sbjct: 212 TFYHAATGSLPF 223
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHDSIQ 59
GA+ +V + + + TG A K I ++ D Q+ RE I +L H NIV L + ++
Sbjct: 20 GAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLR 79
Query: 60 EENYH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
+N YLVFD + ++ + + Q+++ + + HS G++HRD+KP
Sbjct: 80 ADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKP 137
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+LL ++ VK+ADFGL+
Sbjct: 138 SNILLNAECH---VKVADFGLS 156
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
EA +L++++L NP+KRI+A++ALKHP++
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFV 332
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEVL-KKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+L Y K +D+W+ G IL +L G P F
Sbjct: 190 YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK-LSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
GA + V R K TG FA K+ N L D Q RE + +KL H NIV+L +I+
Sbjct: 20 GATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLNHKNIVKLF-AIE 76
Query: 60 EEN---YHYLVFDLVTGGELF---EDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
EE + L+ + G L+ E+ E++ ++ ++ +NH NG+VHR
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHR 136
Query: 114 DLKPENLLLASKAKGAAV-KLADFGLAIEVQGEQQ 147
++KP N++ G +V KL DFG A E++ ++Q
Sbjct: 137 NIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 236 ETVDCLKKFNARRKLKVSTR-QGFAGTPGYLSPE-----VLKKE---PYGKPVDIWACGV 286
++V L F A R+L+ + GT YL P+ VL+K+ YG VD+W+ GV
Sbjct: 152 QSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGV 211
Query: 287 ILYILLVGYPPF 298
Y G PF
Sbjct: 212 TFYHAATGSLPF 223
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 97/244 (39%), Gaps = 38/244 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G FS V R G+ A K + L A+ +E + ++L HPN+++ + S
Sbjct: 43 GQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI 102
Query: 60 EENYHYLVFDLVTGGELFEDIV----AREFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
E+N +V +L G+L I + E Q+ ++ H HS V+HRD+
Sbjct: 103 EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDI 162
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQGEQQA--------------------------- 148
KP N+ + + VKL D GL + A
Sbjct: 163 KPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDI 219
Query: 149 W-FGVILYILLVGYPPFWDEDQHRLYAQIKA-GAYDYPSPEWDTVTPEAKNLINQMLTVN 206
W G +LY + PF+ D+ LY+ K DYP D + E + L+N + +
Sbjct: 220 WSLGCLLYEMAALQSPFYG-DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPD 278
Query: 207 PSKR 210
P KR
Sbjct: 279 PEKR 282
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
K + GTP Y+SPE + + Y DIW+ G +LY + PF+ D+ LY+
Sbjct: 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG-DKMNLYSLC 247
Query: 311 KAGAYDDEP 319
K D P
Sbjct: 248 KKIEQCDYP 256
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 69/255 (27%)
Query: 34 QKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
Q+ RE +I + +H NI+ ++D +I++ Y+V DL+ +L++ ++ + S
Sbjct: 70 QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYK-LLKCQHLSN 127
Query: 89 ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA--------- 139
+ + QIL + + HS V+HRDLKP NLLL + +K+ DFGLA
Sbjct: 128 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDH 184
Query: 140 -------------------IEVQGEQQA---W-FGVILYILLVGYPPF-----WDEDQHR 171
+ +G ++ W G IL +L P F D+ H
Sbjct: 185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI 244
Query: 172 L-------------YAQIKAGAYDYPSPE-----WDTVTPEAK----NLINQMLTVNPSK 209
L +KA Y P W+ + P A +L+++MLT NP K
Sbjct: 245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 210 RITASEALKHPWICQ 224
RI +AL HP++ Q
Sbjct: 305 RIEVEQALAHPYLEQ 319
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ T Y +PE+ L + Y K +DIW+ G IL +L P F
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 73 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXGVL 132
Query: 112 HRDLKPENLLLASKAKGAAVKLADFG--------LAIEVQGEQ----------------- 146
HRD+K EN+L+ +KL DFG + + G +
Sbjct: 133 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 191 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSXECQHLIRWCLA 240
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 241 LRPSDRPTFEEIQNHPWM 258
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 152 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 210
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 211 EHDEEIIRGQV 221
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 66/288 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ- 59
GA+ VV ++ TG + A K I + ++ RE +I + +H NI+ + D ++
Sbjct: 65 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRP 124
Query: 60 -----EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
E Y+V DL+ +L + I + + + + + Q+L + + HS V+HRD
Sbjct: 125 TVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 183
Query: 115 LKPENLLLAS-----------------------------------KAKGAAVKLADFGLA 139
LKP NLL+ +A + L ++ A
Sbjct: 184 LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 243
Query: 140 I----------EVQGEQQAWFG------VILYILLVGYPP---FWDEDQHRLYAQIKAGA 180
I E+ +Q + G + L ++++G P R+ A I++
Sbjct: 244 IDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP 303
Query: 181 YDYPSPEWDTVTP----EAKNLINQMLTVNPSKRITASEALKHPWICQ 224
P P W+TV P +A +L+ +ML PS RI+A+ AL+HP++ +
Sbjct: 304 PRQPVP-WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 115/267 (43%), Gaps = 71/267 (26%)
Query: 23 INTKKLSARDFQKL------EREARICRKLQHPNIVRLHD------SIQEENYHYLVFDL 70
+ KKLS R FQ L RE R+ + L+H N++ L D SI++ + YLV L
Sbjct: 56 VAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 114
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ G +IV + S+ + Q+L + + HS G++HRDLKP N+ + ++
Sbjct: 115 M--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE--- 169
Query: 131 VKLADFGLAIEVQGEQQA-----WF---------------------GVILYILLVGYPPF 164
+++ DFGLA + E W+ G I+ LL G F
Sbjct: 170 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 229
Query: 165 WDED---------------QHRLYAQIKAG-AYDY-----PSPEWDTVT------PEAKN 197
D + A+I + A Y P P+ D + P A +
Sbjct: 230 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAID 289
Query: 198 LINQMLTVNPSKRITASEALKHPWICQ 224
L+ +ML ++ +R++A+EAL H + Q
Sbjct: 290 LLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 187 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 233
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 48/264 (18%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKK------LSARDFQKLEREARICRKLQHPNIVRL 54
GAF V V K E K I +K + K+ E I +++H NI+++
Sbjct: 35 GAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKV 94
Query: 55 HDSIQEENYHYLVFDL-VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
D + + + LV + +G +LF I E AS+ +Q++ +V + ++HR
Sbjct: 95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHR 154
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQ---------------------------GEQ 146
D+K EN+++ A+ +KL DFG A ++ E
Sbjct: 155 DIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPEL 211
Query: 147 QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTV 205
+ W GV LY L+ PF + L ++A + P + V+ E +L++ +L
Sbjct: 212 EMWSLGVTLYTLVFEENPFCE-----LEETVEAAIH----PPY-LVSKELMSLVSGLLQP 261
Query: 206 NPSKRITASEALKHPWICQRERVA 229
P +R T + + PW+ Q +A
Sbjct: 262 VPERRTTLEKLVTDPWVTQPVNLA 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 258 FAGTPGYLSPEVLKKEPYGKP-VDIWACGVILYILLVGYPPF 298
F GT Y +PEVL PY P +++W+ GV LY L+ PF
Sbjct: 189 FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 19 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 76
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 77 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 137 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 194
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 195 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 244
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 245 LRPSDRPTFEEIQNHPWM 262
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 156 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 214
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 215 EHDEEIIRGQV 225
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA+ V + V K +G A K I + Q L + R P IV+ + ++
Sbjct: 33 GAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR 92
Query: 61 ENYHYLVFDLVTGG---------ELFEDIVAREFYSEADASHCIQQILESVNHCHSN-GV 110
E ++ +L++ + +D++ E + + ++++NH N +
Sbjct: 93 EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA-----TVKALNHLKENLKI 147
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA-----------------------IEVQGEQQ 147
+HRD+KP N+LL + +KL DFG++ I+ +Q
Sbjct: 148 IHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 148 AW--------FGVILYILLVGYPPF--WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKN 197
+ G+ LY L G P+ W+ +L +K + E +P N
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFIN 264
Query: 198 LINQMLTVNPSKRITASEALKHPWICQRERVA 229
+N LT + SKR E LKHP+I E A
Sbjct: 265 FVNLCLTKDESKRPKYKELLKHPFILMYEERA 296
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 78 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 138 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 196 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 245
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 246 LRPSDRPTFEEIQNHPWM 263
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 157 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 215
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 216 EHDEEIIRGQV 226
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 73 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 112 HRDLKPENLLLASKAKGAAVKLADFG--------LAIEVQGEQ----------------- 146
HRD+K EN+L+ +KL DFG + + G +
Sbjct: 133 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 191 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 240
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 241 LRPSDRPTFEEIQNHPWM 258
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 152 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 210
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 211 EHDEEIIRGQV 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 115/283 (40%), Gaps = 64/283 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD---- 56
GA+ V TG A K ++ S ++ RE R+ + ++H N++ L D
Sbjct: 33 GAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 92
Query: 57 --SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
S++E N YLV L+ G +IV + ++ I QIL + + HS ++HRD
Sbjct: 93 ARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 150
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA-----WF------------------- 150
LKP NL + + +K+ DF LA E W+
Sbjct: 151 LKPSNLAVNEDCE---LKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
Query: 151 --GVILYILLVG---YPPFWDEDQHRLYAQI-------------KAGAYDY-------PS 185
G I+ LL G +P DQ +L ++ A +Y P
Sbjct: 208 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 267
Query: 186 PEWDTV----TPEAKNLINQMLTVNPSKRITASEALKHPWICQ 224
+ V P A +L+ +ML ++ KRITA++AL H + Q
Sbjct: 268 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F
Sbjct: 181 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 54 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 111
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 112 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 171
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 172 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 229
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 230 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 279
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 280 LRPSDRPTFEEIQNHPWM 297
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 191 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 249
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 250 EHDEEIIRGQV 260
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 78 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 138 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 196 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 245
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 246 LRPSDRPTFEEIQNHPWM 263
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 157 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 215
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 216 EHDEEIIRGQV 226
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 93 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 153 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 211 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 260
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 261 LRPSDRPTFEEIQNHPWM 278
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 172 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 230
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 231 EHDEEIIRGQV 241
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 34 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 91
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 92 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 152 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 210 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 259
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 260 LRPSDRPTFEEIQNHPWM 277
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 171 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 229
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 230 EHDEEIIRGQV 240
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 20 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 77
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 78 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 137
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 138 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 195
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 196 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 245
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 246 LRPSDRPTFEEIQNHPWM 263
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 157 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 215
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 216 EHDEEIIRGQV 226
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R K TG + A K + + A + C L P IV L+ +++E
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA-------CAGLTSPRIVPLYGAVRE 137
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +L+ GG L + + + E A + + Q LE + + HS ++H D+K +N+
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 197
Query: 121 LLASKAKGAAVKLADFGLAIEVQ 143
LL+S AA L DFG A+ +Q
Sbjct: 198 LLSSDGSHAA--LCDFGHAVCLQ 218
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 18 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 75
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 76 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 135
Query: 112 HRDLKPENLLLASKAKGAAVKLADFG--------LAIEVQGEQ----------------- 146
HRD+K EN+L+ +KL DFG + + G +
Sbjct: 136 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 193
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 194 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSSECQHLIRWCLA 243
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 244 LRPSDRPTFEEIQNHPWM 261
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 155 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 213
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 214 EHDEEIIRGQV 224
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 66/288 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ- 59
GA+ VV ++ TG + A K I + ++ RE +I + +H NI+ + D ++
Sbjct: 66 GAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRP 125
Query: 60 -----EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
E Y+V DL+ +L + I + + + + + Q+L + + HS V+HRD
Sbjct: 126 TVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRD 184
Query: 115 LKPENLLLAS-----------------------------------KAKGAAVKLADFGLA 139
LKP NLL+ +A + L ++ A
Sbjct: 185 LKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQA 244
Query: 140 I----------EVQGEQQAWFG------VILYILLVGYPP---FWDEDQHRLYAQIKAGA 180
I E+ +Q + G + L ++++G P R+ A I++
Sbjct: 245 IDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLP 304
Query: 181 YDYPSPEWDTVTP----EAKNLINQMLTVNPSKRITASEALKHPWICQ 224
P P W+TV P +A +L+ +ML PS RI+A+ AL+HP++ +
Sbjct: 305 PRQPVP-WETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 34 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 91
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 92 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 151
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 152 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 209
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 210 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSXECQHLIRWCLA 259
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 260 LRPSDRPTFEEIQNHPWM 277
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 171 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 229
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 230 EHDEEIIRGQV 240
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 93 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 153 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 211 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSXECQHLIRWCLA 260
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 261 LRPSDRPTFEEIQNHPWM 278
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 172 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 230
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 231 EHDEEIIRGQV 241
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLE-REARICRKLQHPNIVRLHDSIQ 59
G F V C +ATG +A K + K++ R + + E +I K+ +V L + +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 60 EENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
++ LV L+ GG+L I + + + EA A +I + H +V+RDLKP
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 118 ENLLLASKAKGAAVKLADFGLAIEVQGEQQA--------------------------W-F 150
EN+LL ++++D GLA+ V Q W
Sbjct: 315 ENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G +LY ++ G PF + +++ + P + +P+A++L +Q+L +P++R
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 211 I-----TASEALKHP 220
+ +A E +HP
Sbjct: 432 LGCRGGSAREVKEHP 446
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T +G GT GY++PEV+K E Y D WA G +LY ++ G PF
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 105 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 165 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 223 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSSECQHLIRWCLA 272
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 273 LRPSDRPTFEEIQNHPWM 290
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 184 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 242
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 243 EHDEEIIRGQV 253
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 62 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 119
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 120 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 180 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 238 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSSECQHLIRWCLA 287
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 288 LRPSDRPTFEEIQNHPWM 305
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 199 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 257
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 258 EHDEEIIRGQV 268
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R K TG + A K + + A + C L P IV L+ +++E
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMA-------CAGLTSPRIVPLYGAVRE 156
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +L+ GG L + + + E A + + Q LE + + HS ++H D+K +N+
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV 216
Query: 121 LLASKAKGAAVKLADFGLAIEVQ 143
LL+S AA L DFG A+ +Q
Sbjct: 217 LLSSDGSHAA--LCDFGHAVCLQ 237
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 42 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 99
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 100 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 159
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 160 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 217
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 218 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RVSXECQHLIRWCLA 267
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 268 LRPSDRPTFEEIQNHPWM 285
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 179 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 237
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 238 EHDEEIIRGQV 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 15 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 72
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 73 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 132
Query: 112 HRDLKPENLLLASKAKGAAVKLADFG--------LAIEVQGEQ----------------- 146
HRD+K EN+L+ +KL DFG + + G +
Sbjct: 133 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 190
Query: 147 -QAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 191 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFRQ---------RVSSECQHLIRWCLA 240
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 241 LRPSDRPTFEEIQNHPWM 258
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 152 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 210
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 211 EHDEEIIGGQV 221
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 38/255 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLE-REARICRKLQHPNIVRLHDSIQ 59
G F V C +ATG +A K + K++ R + + E +I K+ +V L + +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 60 EENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
++ LV L+ GG+L I + + + EA A +I + H +V+RDLKP
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 118 ENLLLASKAKGAAVKLADFGLAIEVQGEQQA--------------------------W-F 150
EN+LL ++++D GLA+ V Q W
Sbjct: 315 ENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWAL 371
Query: 151 GVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
G +LY ++ G PF + +++ + P + +P+A++L +Q+L +P++R
Sbjct: 372 GCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431
Query: 211 I-----TASEALKHP 220
+ +A E +HP
Sbjct: 432 LGCRGGSAREVKEHP 446
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T +G GT GY++PEV+K E Y D WA G +LY ++ G PF
Sbjct: 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 114/267 (42%), Gaps = 71/267 (26%)
Query: 23 INTKKLSARDFQKL------EREARICRKLQHPNIVRLHD------SIQEENYHYLVFDL 70
+ KKLS R FQ L RE R+ + L+H N++ L D SI++ + YLV L
Sbjct: 48 VAVKKLS-RPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTL 106
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ G +IV + S+ + Q+L + + HS G++HRDLKP N+ + +
Sbjct: 107 M--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE--- 161
Query: 131 VKLADFGLAIEVQGEQQA-----WF---------------------GVILYILLVGYPPF 164
+++ DFGLA + E W+ G I+ LL G F
Sbjct: 162 LRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF 221
Query: 165 WDED---------------QHRLYAQIKAG-AYDY-----PSPEWDTVT------PEAKN 197
D + A+I + A Y P P+ D + P A +
Sbjct: 222 PGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAID 281
Query: 198 LINQMLTVNPSKRITASEALKHPWICQ 224
L+ +ML ++ +R++A+EAL H + Q
Sbjct: 282 LLGRMLVLDSDQRVSAAEALAHAYFSQ 308
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 257 GFAGTPGYLSPEV-LKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
G+ T Y +PE+ L Y + VDIW+ G I+ LL G F D
Sbjct: 179 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSD 225
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 106 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 166 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 224 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSSECQHLIRWCLA 273
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 274 LRPSDRPTFEEIQNHPWM 291
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 185 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 243
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 244 EHDEEIIGGQV 254
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 67 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 124
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 125 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 184
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 185 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 242
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 243 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSXECQHLIRWCLA 292
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 293 LRPSDRPTFEEIQNHPWM 310
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 204 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 262
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 263 EHDEEIIRGQV 273
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 106 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 166 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 224 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSSECQHLIRWCLA 273
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 274 LRPSDRPTFEEIQNHPWM 291
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 185 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 243
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 244 EHDEEIIGGQV 254
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 105 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 165 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 223 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSSECQHLIRWCLA 272
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 273 LRPSDRPTFEEIQNHPWM 290
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 184 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 242
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 243 EHDEEIIGGQV 253
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 105 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 165 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 223 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSSECQHLIRWCLA 272
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 273 LRPSDRPTFEEIQNHPWM 290
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 184 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 242
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 243 EHDEEIIGGQV 253
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 62 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 119
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 120 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 179
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 180 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 237
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 238 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSXECQHLIRWCLA 287
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 288 LRPSDRPTFEEIQNHPWM 305
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 199 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 257
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 258 EHDEEIIRGQV 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 42/257 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQ 59
G+F V + T +A K +N +K R+ + + +E +I + L+HP +V L S Q
Sbjct: 26 GSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
+E ++V DL+ GG+L + + E I +++ ++++ + ++HRD+KP+N
Sbjct: 86 DEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDN 145
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQQA----------------------------W-- 149
+LL V + DF +A + E Q W
Sbjct: 146 ILLDEHGH---VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWS 202
Query: 150 FGVILYILLVGYPPFW---DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVN 206
GV Y LL G P+ + + YPS W + E +L+ ++L N
Sbjct: 203 LGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSA-W---SQEMVSLLKKLLEPN 258
Query: 207 PSKRITA-SEALKHPWI 222
P +R + S+ P++
Sbjct: 259 PDQRFSQLSDVQNFPYM 275
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 106 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 166 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 224 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSXECQHLIRWCLA 273
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 274 LRPSDRPTFEEIQNHPWM 291
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 185 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 243
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 244 EHDEEIIGGQV 254
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 48 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 105
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 106 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 165
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 166 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 223
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 224 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSXECQHLIRWCLA 273
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 274 LRPSDRPTFEEIQNHPWM 291
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 185 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 243
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 244 EHDEEIIGGQV 254
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 47 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 104
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 105 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 164
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 165 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 222
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 223 AAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVFFR---------QRVSXECQHLIRWCLA 272
Query: 205 VNPSKRITASEALKHPWI 222
+ PS R T E HPW+
Sbjct: 273 LRPSDRPTFEEIQNHPWM 290
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 184 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 242
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 243 EHDEEIIGGQV 253
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++D+ + E Y+V + V G L DIV
Sbjct: 50 ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVH 108
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
E + A I +++N H NG++HRD+KP N+L+++ AVK+ DFG+A
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIARA 165
Query: 142 VQ-------------------GEQQA------------WFGVILYILLVGYPPF-WDEDQ 169
+ +QA G +LY +L G PPF D
Sbjct: 166 IADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 226 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++D+ + E Y+V + V G L DIV
Sbjct: 50 ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVH 108
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
E + A I +++N H NG++HRD+KP N+++++ AVK+ DFG+A
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARA 165
Query: 142 VQ-------------------GEQQA------------WFGVILYILLVGYPPF-WDEDQ 169
+ +QA G +LY +L G PPF D
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD 225
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 226 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
V+ GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++D+ + E Y+V + V G L DIV
Sbjct: 67 ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVH 125
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA-- 139
E + A I +++N H NG++HRD+KP N+++++ AVK+ DFG+A
Sbjct: 126 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARA 182
Query: 140 -----------IEVQGEQQAW------------------FGVILYILLVGYPPF-WDEDQ 169
V G Q G +LY +L G PPF D
Sbjct: 183 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 242
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 243 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 288
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
V+ GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 50/258 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL--------QHPNIV 52
G F V ++ + L A K + ++S D+ +L R+ ++ ++
Sbjct: 35 GGFGSVYSGIRVSDNLPVAIKHVEKDRIS--DWGELPNGTRVPMEVVLLKKVSSGFSGVI 92
Query: 53 RLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVV 111
RL D + + L+ + +LF+ I R E A Q+LE+V HCH+ GV+
Sbjct: 93 RLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVL 152
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------------------------GEQ 146
HRD+K EN+L+ +KL DFG ++ G
Sbjct: 153 HRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRS 210
Query: 147 QA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLT 204
A W G++LY ++ G PF + D+ + Q+ V+ E ++LI L
Sbjct: 211 AAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSXECQHLIRWCLA 260
Query: 205 VNPSKRITASEALKHPWI 222
+ P R T E HPW+
Sbjct: 261 LRPXDRPTFEEIQNHPWM 278
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 172 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 230
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 231 EHDEEIIRGQV 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++D+ + E Y+V + V G L DIV
Sbjct: 50 ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVH 108
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
E + A I +++N H NG++HRD+KP N+++++ AVK+ DFG+A
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARA 165
Query: 142 VQ-------------------GEQQA------------WFGVILYILLVGYPPF-WDEDQ 169
+ +QA G +LY +L G PPF D
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 226 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
V+ GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF VV C K + A K I S + + E R ++ HPNIV+L+ +
Sbjct: 20 GAFGVV--CKAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACL- 72
Query: 61 ENYHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESVNHCHS---NGVVHRD 114
N LV + GG L+ + E +Y+ A A Q + V + HS ++HRD
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 131
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQ 143
LKP NLLL A G +K+ DFG A ++Q
Sbjct: 132 LKPPNLLLV--AGGTVLKICDFGTACDIQ 158
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ +++PEV + Y + D+++ G+IL+ ++ PF
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++D+ + E Y+V + V G L DIV
Sbjct: 50 ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTL-RDIVH 108
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
E + A I +++N H NG++HRD+KP N+++++ AVK+ DFG+A
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARA 165
Query: 142 VQ-------------------GEQQA------------WFGVILYILLVGYPPF-WDEDQ 169
+ +QA G +LY +L G PPF D
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 226 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
V+ GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GAF VV C K + A K I S + + E R ++ HPNIV+L+ +
Sbjct: 19 GAFGVV--CKAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNHPNIVKLYGACL- 71
Query: 61 ENYHYLVFDLVTGGELFEDIVARE---FYSEADASHCIQQILESVNHCHS---NGVVHRD 114
N LV + GG L+ + E +Y+ A A Q + V + HS ++HRD
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRD 130
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQ 143
LKP NLLL A G +K+ DFG A ++Q
Sbjct: 131 LKPPNLLLV--AGGTVLKICDFGTACDIQ 157
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
G+ +++PEV + Y + D+++ G+IL+ ++ PF
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 52/246 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREAR-ICRKLQHPNIVRLHDSIQ 59
GAF V K FA KI+N ++ R RE R + I LH + Q
Sbjct: 85 GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144
Query: 60 EENYHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
++N YLV D GG+L FED + E A + +++ +++ H VHR
Sbjct: 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM-----ARFYLAEMVIAIDSVHQLHYVHR 199
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQ------------------------------ 143
D+KP+N+L+ ++LADFG +++
Sbjct: 200 DIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKG 256
Query: 144 --GEQQAW--FGVILYILLVGYPPFWDEDQHRLYAQIKAGA--YDYPSPEWDTVTPEAKN 197
G + W GV +Y +L G PF+ E Y +I + +P+ D V+ AK+
Sbjct: 257 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTD-VSENAKD 315
Query: 198 LINQML 203
LI +++
Sbjct: 316 LIRRLI 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 259 AGTPGYLSPEVLK-----KEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
GTP Y+SPE+L+ K YG D W+ GV +Y +L G PF+ E Y +I
Sbjct: 237 VGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA +VV+ + A K IN +K +L +E + + HPNIV + S
Sbjct: 21 GATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHPNIVSYYTSFVV 79
Query: 61 ENYHYLVFDLVTGG---ELFEDIVARE-----FYSEADASHCIQQILESVNHCHSNGVVH 112
++ +LV L++GG ++ + IVA+ E+ + ++++LE + + H NG +H
Sbjct: 80 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIH 139
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLA 139
RD+K N+LL + +V++ADFG++
Sbjct: 140 RDVKAGNILL---GEDGSVQIADFGVS 163
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 255 RQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPF 298
R+ F GTP +++PEV+++ Y DIW+ G+ L G P+
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 108/253 (42%), Gaps = 34/253 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS--- 57
G+F V + + T +E A + +KL+ + Q+ + EA + LQHPNIVR +DS
Sbjct: 37 GSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWES 96
Query: 58 -IQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG--VVHRD 114
++ + LV +L T G L + + +QIL+ + H+ ++HRD
Sbjct: 97 TVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLA-IEVQGEQQAWFGVILYILLVGYPPFWDEDQHRLY 173
LK +N+ + +VK+ D GLA ++ +A G + Y +DE +Y
Sbjct: 157 LKCDNIFITGPT--GSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEKYDESVD-VY 213
Query: 174 A----QIKAGAYDYPSPE-------------------WDTVT-PEAKNLINQMLTVNPSK 209
A ++ +YP E +D V PE K +I + N +
Sbjct: 214 AFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDE 273
Query: 210 RITASEALKHPWI 222
R + + L H +
Sbjct: 274 RYSIKDLLNHAFF 286
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA +VV+ + A K IN +K +L +E + + HPNIV + S
Sbjct: 26 GATAVVQAAYCAPKKEKVAIKRINLEKCQT-SMDELLKEIQAMSQCHHPNIVSYYTSFVV 84
Query: 61 ENYHYLVFDLVTGG---ELFEDIVARE-----FYSEADASHCIQQILESVNHCHSNGVVH 112
++ +LV L++GG ++ + IVA+ E+ + ++++LE + + H NG +H
Sbjct: 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIH 144
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLA 139
RD+K N+LL + +V++ADFG++
Sbjct: 145 RDVKAGNILL---GEDGSVQIADFGVS 168
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 255 RQGFAGTPGYLSPEVLKK-EPYGKPVDIWACGVILYILLVGYPPF 298
R+ F GTP +++PEV+++ Y DIW+ G+ L G P+
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLHDSI 58
G F VV K +A K I +L R+ +K+ RE + KL+HP IVR ++
Sbjct: 16 GGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 59 QEEN------------YHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESVN 103
E+N Y Y+ L L + + R E + S C+ QI E+V
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
HS G++HRDLKP N+ VK+ DFGL + +++
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEE 173
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 257 GFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYP 296
G GT Y+SPE + Y VDI++ G+IL+ LL YP
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL--YP 226
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 38/274 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + + + + S +
Sbjct: 34 GSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSSYVTKYYGSYLK 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +++ + + GG + + A F E + +++IL+ +++ HS +HRD+K N+
Sbjct: 93 GSKLWIIMEYLGGGSALDLLRAGPF-DEFQIATMLKEILKGLDYLHSEKKIHRDIKAANV 151
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 152 LLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGI 208
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + D H + + P+ D T K I+ L +PS R T
Sbjct: 209 TAIELAKGEPP--NSDMHPMRVLFLIPKNNPPTLVGD-FTKSFKEFIDACLNKDPSFRPT 265
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
A E LKH +I + + S + E +D K++ A
Sbjct: 266 AKELLKHKFIVKNSKKTS--YLTELIDRFKRWKA 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRL 306
R F GTP +++PEV+++ Y DIW+ G+ L G PP + D H +
Sbjct: 177 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP--NSDMHPM 226
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 44/248 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V C KATG +A K +N K+L R +Q E +I K+ IV L + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 60 EENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ LV ++ GG++ I + + E A QI+ + H H +++RDL
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQ----------------------GEQQAW---- 149
KPEN+LL V+++D GLA+E++ GE+ +
Sbjct: 316 KPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 150 --FGVILYILLVGYPPFWDE----DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
GV LY ++ PF + L ++ A YP D +P +K+ +L
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALL 428
Query: 204 TVNPSKRI 211
+P KR+
Sbjct: 429 QKDPEKRL 436
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ +G+AGTPG+++PE+L E Y VD +A GV LY ++ PF
Sbjct: 344 TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 44/248 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V C KATG +A K +N K+L R +Q E +I K+ IV L + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 60 EENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ LV ++ GG++ I + + E A QI+ + H H +++RDL
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQ----------------------GEQQAW---- 149
KPEN+LL V+++D GLA+E++ GE+ +
Sbjct: 316 KPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 150 --FGVILYILLVGYPPFWDE----DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
GV LY ++ PF + L ++ A YP D +P +K+ +L
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALL 428
Query: 204 TVNPSKRI 211
+P KR+
Sbjct: 429 QKDPEKRL 436
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
+G+AGTPG+++PE+L E Y VD +A GV LY ++ PF
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 40/201 (19%)
Query: 50 NIVRLHDSIQEENYHYLVFDLVTG-GELFEDIVAREFYSEADASHCIQQILESVNHCHSN 108
++RL D + + L+ + +LF+ I R E A Q+LE+V HCH+
Sbjct: 117 GVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 176
Query: 109 GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ------------------------- 143
GV+HRD+K EN+L+ +KL DFG ++
Sbjct: 177 GVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 144 GEQQA-W-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQ 201
G A W G++LY ++ G PF + D+ + Q+ V+ E ++LI
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFR---------QRVSSECQHLIRW 284
Query: 202 MLTVNPSKRITASEALKHPWI 222
L + PS R T E HPW+
Sbjct: 285 CLALRPSDRPTFEEIQNHPWM 305
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFW 299
L F + LK + F GT Y PE ++ Y G+ +W+ G++LY ++ G PF
Sbjct: 199 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF- 257
Query: 300 DEDQHRLYAQI 310
+ D+ + Q+
Sbjct: 258 EHDEEIIRGQV 268
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 44/248 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V C KATG +A K +N K+L R +Q E +I K+ IV L + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 60 EENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ LV ++ GG++ I + + E A QI+ + H H +++RDL
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQ----------------------GEQQAW---- 149
KPEN+LL V+++D GLA+E++ GE+ +
Sbjct: 316 KPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 150 --FGVILYILLVGYPPFWDE----DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
GV LY ++ PF + L ++ A YP D +P +K+ +L
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALL 428
Query: 204 TVNPSKRI 211
+P KR+
Sbjct: 429 QKDPEKRL 436
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
+G+AGTPG+++PE+L E Y VD +A GV LY ++ PF
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 44/248 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F V C KATG +A K +N K+L R +Q E +I K+ IV L + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 60 EENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ LV ++ GG++ I + + E A QI+ + H H +++RDL
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQ----------------------GEQQAW---- 149
KPEN+LL V+++D GLA+E++ GE+ +
Sbjct: 316 KPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 150 --FGVILYILLVGYPPFWDE----DQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQML 203
GV LY ++ PF + L ++ A YP D +P +K+ +L
Sbjct: 373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALL 428
Query: 204 TVNPSKRI 211
+P KR+
Sbjct: 429 QKDPEKRL 436
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 256 QGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
+G+AGTPG+++PE+L E Y VD +A GV LY ++ PF
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 72 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 131
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 132 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 185
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 186 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 243
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 244 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 303
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 304 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 113 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 172
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 173 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 226
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 227 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 284
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 285 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 344
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 345 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 70 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 129
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 130 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 183
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 184 IKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 241
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 242 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 301
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 302 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 62 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 121
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 122 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 175
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 176 IKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 233
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 234 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 293
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 294 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 128 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 182 IKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 239
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 240 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 299
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 39 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 98
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 99 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 152
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 153 IKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 210
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
G +L LL+G P F D +L IK + +P +
Sbjct: 211 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 270
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 271 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 41/232 (17%)
Query: 23 INTKKLSARDF---QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFED 79
I K++ RD Q L E + + L+H NIV+ S E + + + V GG L
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SA 94
Query: 80 IVAREFYSEADASHCI----QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
++ ++ D I +QILE + + H N +VHRD+K +N+L+ + + +K++D
Sbjct: 95 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISD 152
Query: 136 FGLAIEVQGEQ---QAWFGVILYI---------------------------LLVGYPPFW 165
FG + + G + + G + Y+ + G PPF+
Sbjct: 153 FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
Query: 166 DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEAL 217
+ + + A K G + ++++ EAK I + +P KR A++ L
Sbjct: 213 ELGEPQA-AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 258 FAGTPGYLSPEVLKKEP--YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F GT Y++PE++ K P YGK DIW+ G + + G PPF++ + + A K G +
Sbjct: 169 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFKVGMF 227
Query: 316 DDEPK 320
P+
Sbjct: 228 KVHPE 232
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 41/232 (17%)
Query: 23 INTKKLSARDF---QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFED 79
I K++ RD Q L E + + L+H NIV+ S E + + + V GG L
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL-SA 108
Query: 80 IVAREFYSEADASHCI----QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
++ ++ D I +QILE + + H N +VHRD+K +N+L+ + + +K++D
Sbjct: 109 LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISD 166
Query: 136 FGLAIEVQGEQ---QAWFGVILYI---------------------------LLVGYPPFW 165
FG + + G + + G + Y+ + G PPF+
Sbjct: 167 FGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
Query: 166 DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEAL 217
+ + + A K G + ++++ EAK I + +P KR A++ L
Sbjct: 227 ELGEPQA-AMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLL 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 258 FAGTPGYLSPEVLKKEP--YGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 315
F GT Y++PE++ K P YGK DIW+ G + + G PPF++ + + A K G +
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFKVGMF 241
Query: 316 DDEPK 320
P+
Sbjct: 242 KVHPE 246
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 94 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 148 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 205
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
G +L LL+G P F D +L IK + +P +
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 47 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 106
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 107 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 160
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF----------------------- 150
+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 161 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID 218
Query: 151 ----GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
G +L LL+G P F D +L IK + +P +
Sbjct: 219 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 278
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 279 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R K TG + A K + + + C L P IV L+ +++E
Sbjct: 85 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA-------CAGLSSPRIVPLYGAVRE 137
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +L+ GG L + I E A + + Q LE + + H+ ++H D+K +N+
Sbjct: 138 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 197
Query: 121 LLASKAKGAAVKLADFGLAIEVQ 143
LL+S AA L DFG A+ +Q
Sbjct: 198 LLSSDGSRAA--LCDFGHALCLQ 218
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
GT +++PEV+ +P VDIW+ ++ +L G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV---RLHDS 57
G F V R + + TG + A K ++LS ++ ++ E +I +KL HPN+V + D
Sbjct: 25 GGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDG 83
Query: 58 IQE---ENYHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESVNHCHSN 108
+Q+ + L + GG+L FE+ E + I ++ + H N
Sbjct: 84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISSALRYLHEN 140
Query: 109 GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV-QGEQQAWF-GVILYI 156
++HRDLKPEN++L + K+ D G A E+ QGE F G + Y+
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
F GT YL+PE+L+++ Y VD W+ G + + + G+ PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R K TG + A K + + + C L P IV L+ +++E
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA-------CAGLSSPRIVPLYGAVRE 121
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +L+ GG L + I E A + + Q LE + + H+ ++H D+K +N+
Sbjct: 122 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 181
Query: 121 LLASKAKGAAVKLADFGLAIEVQ 143
LL+S AA L DFG A+ +Q
Sbjct: 182 LLSSDGSRAA--LCDFGHALCLQ 202
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
GT +++PEV+ +P VDIW+ ++ +L G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV---RLHDS 57
G F V R + + TG + A K ++LS ++ ++ E +I +KL HPN+V + D
Sbjct: 26 GGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDG 84
Query: 58 IQE---ENYHYLVFDLVTGGEL------FEDIVAREFYSEADASHCIQQILESVNHCHSN 108
+Q+ + L + GG+L FE+ E + I ++ + H N
Sbjct: 85 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCG---LKEGPIRTLLSDISSALRYLHEN 141
Query: 109 GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV-QGEQQAWF-GVILYI 156
++HRDLKPEN++L + K+ D G A E+ QGE F G + Y+
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
F GT YL+PE+L+++ Y VD W+ G + + + G+ PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R K TG + A K + + + C L P IV L+ +++E
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVA-------CAGLSSPRIVPLYGAVRE 135
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ + +L+ GG L + I E A + + Q LE + + H+ ++H D+K +N+
Sbjct: 136 GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 195
Query: 121 LLASKAKGAAVKLADFGLAIEVQ 143
LL+S AA L DFG A+ +Q
Sbjct: 196 LLSSDGSRAA--LCDFGHALCLQ 216
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 23/39 (58%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
GT +++PEV+ +P VDIW+ ++ +L G P+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 61/230 (26%)
Query: 48 HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYS--------EADASHCIQQIL 99
HPN++R + S + + Y+ +L +D+V + S E + ++QI
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 100 ESVNHCHSNGVVHRDLKPENLLLASKAKGAA----------VKLADFGLAIEVQGEQ--- 146
V H HS ++HRDLKP+N+L+++ ++ A + ++DFGL ++ Q
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 147 ----------QAWFG-----------------------VILYILLVGYPPFWDEDQHRLY 173
W V YIL G PF D++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRE 261
Query: 174 AQIKAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKRITASEALKHP 220
+ I G + + ++ EA +LI+QM+ +P KR TA + L+HP
Sbjct: 262 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 96/230 (41%), Gaps = 61/230 (26%)
Query: 48 HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYS--------EADASHCIQQIL 99
HPN++R + S + + Y+ +L +D+V + S E + ++QI
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 100 ESVNHCHSNGVVHRDLKPENLLLASKAKGAA----------VKLADFGLAIEVQGEQ--- 146
V H HS ++HRDLKP+N+L+++ ++ A + ++DFGL ++ Q
Sbjct: 144 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 147 ----------QAWFG-----------------------VILYILLVGYPPFWDEDQHRLY 173
W V YIL G PF D++
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DKYSRE 261
Query: 174 AQIKAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKRITASEALKHP 220
+ I G + + ++ EA +LI+QM+ +P KR TA + L+HP
Sbjct: 262 SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 115/292 (39%), Gaps = 85/292 (29%)
Query: 13 ATGLEFAA------KIINTKKLSARDFQKLE---REARICRKLQHPNIVRLHDSIQEENY 63
GL F+A K + KK+ D Q ++ RE +I R+L H NIV++ + +
Sbjct: 23 GNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGS 82
Query: 64 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ--------------ILESVNHCHSNG 109
L D+ + EL + +E Y E D ++ ++Q +L + + HS
Sbjct: 83 Q-LTDDVGSLTELNSVYIVQE-YMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN 140
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLAIEV-----------QGEQQAWF-------- 150
V+HRDLKP NL + + +K+ DFGLA + +G W+
Sbjct: 141 VLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS 198
Query: 151 -------------GVILYILLVG-------------------YPPFWDEDQHRLYAQIKA 178
G I +L G P +ED+ L + I
Sbjct: 199 PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPV 258
Query: 179 GA-YDYPSPE------WDTVTPEAKNLINQMLTVNPSKRITASEALKHPWIC 223
D P ++ EA + + Q+LT +P R+TA EAL HP++
Sbjct: 259 YIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMS 310
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 38 REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS----- 92
RE + ++LQH NI+ L I + +L+F E E+ + + D S
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIF------EYAENDLKKYMDKNPDVSMRVIK 135
Query: 93 HCIQQILESVNHCHSNGVVHRDLKPENLLL--ASKAKGAAVKLADFGLA 139
+ Q++ VN CHS +HRDLKP+NLLL + ++ +K+ DFGLA
Sbjct: 136 SFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 202 MLTVNPSKRITASEALKHPWICQRE 226
ML ++P KRI+A AL+HP+ +
Sbjct: 302 MLEMDPVKRISAKNALEHPYFSHND 326
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 117/290 (40%), Gaps = 82/290 (28%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH----- 55
G+F VV + +G A K K L + F+ RE +I RKL H NIVRL
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYS 84
Query: 56 -DSIQEENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHC 105
++E Y LV D V E + VAR YS A + + Q+ S+ +
Sbjct: 85 SGEKKDEVYLNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF-------------- 150
HS G+ HRD+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 139 HSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 151 -------------GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GA 180
G +L LL+G P F D +L IK
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 181 YDYPSPE---WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ +P + W V PEA L +++L P+ R+T EA H +
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS-ARDF--QKLEREARICRKLQHPNIVRLHDS 57
G F+ V + K T A K I S A+D + RE ++ ++L HPNI+ L D+
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA 80
Query: 58 IQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC---IQQILESVNHCHSNGVVHRD 114
++ LVFD + E +++ ++ SH + L+ + + H + ++HRD
Sbjct: 81 FGHKSNISLVFDFM---ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
LKP NLLL + +KLADFGLA +A+
Sbjct: 138 LKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY 169
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 264 YLSPEVL-KKEPYGKPVDIWACGVILYILLVGYP 296
Y +PE+L YG VD+WA G IL LL+ P
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELLLRVP 211
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 117/290 (40%), Gaps = 82/290 (28%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH----- 55
G+F VV + +G A K K L + F+ RE +I RKL H NIVRL
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYS 84
Query: 56 -DSIQEENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHC 105
++E Y LV D V E + VAR YS A + + Q+ S+ +
Sbjct: 85 SGEKKDEVYLNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQAWF-------------- 150
HS G+ HRD+KP+NLLL A +KL DFG A + V+GE +
Sbjct: 139 HSFGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFG 196
Query: 151 -------------GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GA 180
G +L LL+G P F D +L IK
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 181 YDYPSPE---WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ +P + W V PEA L +++L P+ R+T EA H +
Sbjct: 257 FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 68 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 128 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 182 IKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 239
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
W G +L LL+G P F D +L IK + +P +
Sbjct: 240 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 299
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 106 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 159
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 160 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 217
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 218 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 277
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
Score = 28.5 bits (62), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 35 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 94
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 95 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 148
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 149 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 206
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 207 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 266
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 267 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 30 ARD---FQKLEREARICRKLQHPNIVRLHDSIQEEN----YHYLVFDLVTGGELFEDIVA 82
ARD + + REA+ L HP IV ++ + + E Y+V + V G L DIV
Sbjct: 50 ARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTL-RDIVH 108
Query: 83 REF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
E + A I +++N H NG++HRD+KP N+++++ AVK+ DFG+A
Sbjct: 109 TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARA 165
Query: 142 VQ-------------------GEQQA------------WFGVILYILLVGYPPF-WDEDQ 169
+ +QA G +LY +L G PPF D
Sbjct: 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV 225
Query: 170 HRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRI-TASE 215
Y ++ PS + ++ + ++ + L NP R TA+E
Sbjct: 226 SVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENRYQTAAE 271
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 251 KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDE 301
V+ GT YLSPE + + D+++ G +LY +L G PPF +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 53 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 112
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 113 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 166
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 167 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 224
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 225 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 284
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 285 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 94 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 148 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 46 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 105
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 106 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 159
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 160 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 217
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYP---SP 186
W G +L LL+G P F D +L IK + +P +
Sbjct: 218 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 277
Query: 187 EWDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 38 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 97
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 98 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 151
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 152 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 209
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 210 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 269
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 270 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 94 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 148 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 116/281 (41%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRLH------DSIQEENY 63
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL ++E Y
Sbjct: 42 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 101
Query: 64 HYLVFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
LV D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 102 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 155
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 156 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 213
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 214 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 273
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 274 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 98/234 (41%), Gaps = 65/234 (27%)
Query: 48 HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYS--------EADASHCIQQIL 99
HPN++R + S + + Y+ +L +D+V + S E + ++QI
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 100 ESVNHCHSNGVVHRDLKPENLLLASKAKGAA----------VKLADFGLAIEVQGEQQAW 149
V H HS ++HRDLKP+N+L+++ ++ A + ++DFGL ++ Q ++
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 150 ---------------------------------------FG-VILYILLVGYPPFWDEDQ 169
G V YIL G PF D+
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DK 243
Query: 170 HRLYAQIKAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKRITASEALKHP 220
+ + I G + + ++ EA +LI+QM+ +P KR TA + L+HP
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + P + + + S +
Sbjct: 18 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +++ + + GG D++ E + +++IL+ +++ HS +HRD+K N+
Sbjct: 77 DTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 135
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 136 LLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGI 192
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + H + + P+ E + P K + L PS R T
Sbjct: 193 TAIELARGEPPH--SELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPT 249
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
A E LKH +I + + S + E +D K++ A +
Sbjct: 250 AKELLKHKFILRNAKKTS--YLTELIDRYKRWKAEQ 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPP 297
R F GTP +++PEV+K+ Y DIW+ G+ L G PP
Sbjct: 161 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 115/288 (39%), Gaps = 78/288 (27%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH----- 55
G+F VV + +G A K K L + F+ RE +I RKL H NIVRL
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----KVLQGKAFKN--RELQIMRKLDHCNIVRLRYFFYS 84
Query: 56 -DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI-------QQILESVNHCHS 107
++E Y LV D V VAR YS A + + Q+ S+ + HS
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYR---VARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 108 NGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ------------------- 147
G+ HRD+KP+NLLL A +KL DFG A + V+GE
Sbjct: 141 FGICHRDIKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGAT 198
Query: 148 -------AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYD 182
W G +L LL+G P F D +L IK +
Sbjct: 199 DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFA 258
Query: 183 YPSPE---WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+P + W V PEA L +++L P+ R+T EA H +
Sbjct: 259 FPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + P + + + S +
Sbjct: 18 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYVTKYYGSYLK 76
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +++ + + GG D++ E + +++IL+ +++ HS +HRD+K N+
Sbjct: 77 DTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 135
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 136 LLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 192
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + H + + P+ E + P K + L PS R T
Sbjct: 193 TAIELARGEPPH--SELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPT 249
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
A E LKH +I + + S + E +D K++ A +
Sbjct: 250 AKELLKHKFILRNAKKTS--YLTELIDRYKRWKAEQ 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPP 297
R F GTP +++PEV+K+ Y DIW+ G+ L G PP
Sbjct: 161 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/276 (22%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + P + + + S +
Sbjct: 33 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDE-IEDIQQEITVLSQCDSPYVTKYYGSYLK 91
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +++ + + GG D++ E + +++IL+ +++ HS +HRD+K N+
Sbjct: 92 DTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 150
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 151 LLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGI 207
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + H + + P+ E + P K + L PS R T
Sbjct: 208 TAIELARGEPPH--SELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPT 264
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
A E LKH +I + + S + E +D K++ A +
Sbjct: 265 AKELLKHKFILRNAKKTS--YLTELIDRYKRWKAEQ 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPP 297
R F GTP +++PEV+K+ Y DIW+ G+ L G PP
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 65/234 (27%)
Query: 48 HPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYS--------EADASHCIQQIL 99
HPN++R + S + + Y+ +L +D+V + S E + ++QI
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 100 ESVNHCHSNGVVHRDLKPENLLLASKAKGAA----------VKLADFGLAIEVQGEQ--- 146
V H HS ++HRDLKP+N+L+++ ++ A + ++DFGL ++ Q
Sbjct: 126 SGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 147 ----------QAWFG---------------------------VILYILLVGYPPFWDEDQ 169
W V YIL G PF D+
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG--DK 243
Query: 170 HRLYAQIKAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKRITASEALKHP 220
+ + I G + + ++ EA +LI+QM+ +P KR TA + L+HP
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R + G + A KI+ + A + RE I ++L+HPNIV ++ +
Sbjct: 48 GSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 61 ENYHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILESVNHCHSNG--VVHRDL 115
+V + ++ G L+ + ARE E + + +N+ H+ +VHRDL
Sbjct: 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDL 165
Query: 116 KPENLLLASKAKGAAVKLADFGLA 139
K NLL+ K VK+ DFGL+
Sbjct: 166 KSPNLLVDKK---YTVKVCDFGLS 186
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
AGTP +++PEVL+ EP + D+++ GVIL+ L P+ + + ++ A +
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++ V K T A K +N D +++ RE I +L+ I+RL+D I
Sbjct: 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIP 96
Query: 61 ENYH-----YLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
++ Y+V ++ +LF+ + F +E + +L N H +G++HR
Sbjct: 97 DDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
DLKP N LL + +VK+ DFGLA + E+
Sbjct: 154 DLKPANCLL---NQDCSVKVCDFGLARTINSEKDT 185
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 187 EWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
++ +++ + NL+ ML NP+KRIT +AL HP++
Sbjct: 330 KYPSISDDGINLLESMLKFNPNKRITIDQALDHPYL 365
Score = 28.1 bits (61), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILL 292
Y +PE +L +E Y K +DIW+ G I LL
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 119/281 (42%), Gaps = 81/281 (28%)
Query: 15 GLEFAAKIINTKKLSA-----RDFQKLEREARICRKLQHPNIVRL----HDSIQEENYHY 65
G+ + AK+ ++ +L A +D + RE +I RKL H NIVRL + S ++++ Y
Sbjct: 34 GVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVY 93
Query: 66 L--VFDLVTGGELFEDI--VAREFYSEADASHCI-------QQILESVNHCHSNGVVHRD 114
L V D V E + VAR YS A + + Q+ S+ + HS G+ HRD
Sbjct: 94 LNLVLDYVP-----ETVYRVARH-YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIE-VQGEQQ-------------------------- 147
+KP+NLLL A +KL DFG A + V+GE
Sbjct: 148 IKPQNLLLDPDT--AVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 148 AWF-GVILYILLVGYPPF-WDEDQHRLYAQIKA----------------GAYDYPSPE-- 187
W G +L LL+G P F D +L IK + +P +
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 188 -WDTV-----TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
W V PEA L +++L P+ R+T EA H +
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Score = 28.1 bits (61), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 264 YLSPE-VLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE + Y +D+W+ G +L LL+G P F
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 106/254 (41%), Gaps = 43/254 (16%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++ V + + K TG A K + + D Q++ +E I ++ P++V+ + S +
Sbjct: 40 GSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 61 ENYHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPEN 119
++V + G + + I R + +E + + +Q L+ + + H +HRD+K N
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN 155
Query: 120 LLLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FG 151
+LL ++ KLADFG+A ++ W G
Sbjct: 156 ILLNTEGHA---KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLG 212
Query: 152 VILYILLVGYPPFWDEDQHRLYAQIKAG---AYDYPSPEWDTVTPEAKNLINQMLTVNPS 208
+ + G PP+ D R I + P D T + + Q L +P
Sbjct: 213 ITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT----DFVKQCLVKSPE 268
Query: 209 KRITASEALKHPWI 222
+R TA++ L+HP++
Sbjct: 269 QRATATQLLQHPFV 282
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 252 VSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
++ R GTP +++PEV+++ Y DIW+ G+ + G PP+ D
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 115/279 (41%), Gaps = 80/279 (28%)
Query: 15 GLEFAAKIINTKKLSAR----DFQKLEREARICRKLQHPNIVRL------HDSIQEENYH 64
G+ F AK++ + +++ + D + RE +I R ++HPN+V L + ++E +
Sbjct: 54 GVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113
Query: 65 YLVFDLVTGGELFEDIVAREFYSEADASHCIQ---------QILESVNHCHSNGVVHRDL 115
LV + V + V R A + Q+L S+ + HS G+ HRD+
Sbjct: 114 NLVLEYVP------ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDI 167
Query: 116 KPENLLLASKAKGAAVKLADFGLA-IEVQGEQQA-------------------------- 148
KP+NLLL + +KL DFG A I + GE
Sbjct: 168 KPQNLLLDPPS--GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDI 225
Query: 149 W-FGVILYILLVGYPPFWDE---DQ---------HRLYAQIKAGAYDY---------PSP 186
W G ++ L+ G P F E DQ QIK +Y P P
Sbjct: 226 WSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHP 285
Query: 187 EWDT----VTPEAKNLINQMLTVNPSKRITASEALKHPW 221
P+A +LI+++L PS R+TA EAL HP+
Sbjct: 286 FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S A
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DAT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 229 ASIVHRQ-ETVDCLKKFNARRK-----LKVSTRQGFAGTPG-----YLSPEVLKKEPYGK 277
A I+HR + + + K +A K L + F TP Y +PEV+ Y +
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 278 PVDIWACGVILYILLVG 294
VDIW+ GVI+ ++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + P I R S +
Sbjct: 30 GSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYITRYFGSYLK 88
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+++ + + GG D++ E + +++IL+ +++ HS +HRD+K N+
Sbjct: 89 STKLWIIMEYLGGGSAL-DLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANV 147
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 148 LLSEQGD---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGI 204
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + D H + P+ E P K + L +P R T
Sbjct: 205 TAIELAKGEPP--NSDLHPMRVLFLIPKNSPPTLEGQHSKP-FKEFVEACLNKDPRFRPT 261
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNA 246
A E LKH +I + + S + E +D K++ +
Sbjct: 262 AKELLKHKFITRYTKKTSFL--TELIDRYKRWKS 293
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
R F GTP +++PEV+K+ Y DIW+ G+ L G PP D
Sbjct: 173 RNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S A
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DAT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVF-----DLVTGGELFEDIVARE 84
RE + R L+ HPN+VRL D E LVF DL T + D V
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT----YLDKVPEP 115
Query: 85 FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQG 144
+ Q+L ++ HS+ VVHRDLKP+N+L+ S + +KLADFGLA +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLA-RIYS 171
Query: 145 EQQAWFGVILYI 156
Q A V++ +
Sbjct: 172 FQMALTSVVVTL 183
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 195 AKNLINQMLTVNPSKRITASEALKHPWI 222
K+L+ + LT NP+KRI+A AL HP+
Sbjct: 273 GKDLLLKCLTFNPAKRISAYSALSHPYF 300
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PEVL + Y PVD+W+ G I + P F
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S A
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DAT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 11/77 (14%)
Query: 229 ASIVHRQ-ETVDCLKKFNARRK-----LKVSTRQGFAGTPG-----YLSPEVLKKEPYGK 277
A I+HR + + + K +A K L + F TP Y +PEV+ Y +
Sbjct: 145 AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKE 204
Query: 278 PVDIWACGVILYILLVG 294
VDIW+ GVI+ ++ G
Sbjct: 205 NVDIWSVGVIMGEMIKG 221
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G++ V K A K +N D +++ RE I +L+ I+RLHD I
Sbjct: 39 GSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIP 98
Query: 61 ENYH-----YLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHR 113
E+ Y+V ++ +LF+ + F +E + +L H +G++HR
Sbjct: 99 EDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLGEKFIHESGIIHR 155
Query: 114 DLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ 146
DLKP N LL + +VK+ DFGLA + ++
Sbjct: 156 DLKPANCLL---NQDCSVKICDFGLARTINSDK 185
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 185 SPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
S ++ +++ E +L+ ML N KRIT +AL HP++
Sbjct: 333 SKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVF-----DLVTGGELFEDIVARE 84
RE + R L+ HPN+VRL D E LVF DL T + D V
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT----YLDKVPEP 115
Query: 85 FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQG 144
+ Q+L ++ HS+ VVHRDLKP+N+L+ S + +KLADFGLA +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLA-RIYS 171
Query: 145 EQQAWFGVILYI 156
Q A V++ +
Sbjct: 172 FQMALTSVVVTL 183
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 195 AKNLINQMLTVNPSKRITASEALKHPWICQRER 227
K+L+ + LT NP+KRI+A AL HP+ ER
Sbjct: 273 GKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PEVL + Y PVD+W+ G I + P F
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 38 REARICRKLQ---HPNIVRLHD-----SIQEENYHYLVF-----DLVTGGELFEDIVARE 84
RE + R L+ HPN+VRL D E LVF DL T + D V
Sbjct: 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT----YLDKVPEP 115
Query: 85 FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQG 144
+ Q+L ++ HS+ VVHRDLKP+N+L+ S + +KLADFGLA +
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLA-RIYS 171
Query: 145 EQQAWFGVILYI 156
Q A V++ +
Sbjct: 172 FQMALTSVVVTL 183
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 195 AKNLINQMLTVNPSKRITASEALKHPWICQRER 227
K+L+ + LT NP+KRI+A AL HP+ ER
Sbjct: 273 GKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PEVL + Y PVD+W+ G I + P F
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 21 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFD--LVTGGELFE 78
K+ + K S +Q + +E R +KL+HPN ++ E+ +LV + L + +L E
Sbjct: 86 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 145
Query: 79 DIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG- 137
V ++ E + + L+ + + HS+ ++HRD+K N+LL+ VKL DFG
Sbjct: 146 --VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDFGS 200
Query: 138 ----------------LAIEV---------QGEQQAW-FGVILYILLVGYPPFWDEDQHR 171
+A EV G+ W G+ L PP + + +
Sbjct: 201 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNA 258
Query: 172 LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASI 231
+ A + P+ + + +N ++ L P R T+ LKH ++ RER ++
Sbjct: 259 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL-RERPPTV 317
Query: 232 VHR--QETVDCLKKFN--ARRKLK 251
+ Q T D +++ + RK+K
Sbjct: 318 IMDLIQRTKDAVRELDNLQYRKMK 341
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 258 FAGTPGYLSPEV---LKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
F GTP +++PEV + + Y VD+W+ G+ L PP ++
Sbjct: 210 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 255
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 10/144 (6%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V R + G + A KI+ + A + RE I ++L+HPNIV ++ +
Sbjct: 48 GSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105
Query: 61 ENYHYLVFDLVTGGELFEDI---VAREFYSEADASHCIQQILESVNHCHSNG--VVHRDL 115
+V + ++ G L+ + ARE E + + +N+ H+ +VHR+L
Sbjct: 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNL 165
Query: 116 KPENLLLASKAKGAAVKLADFGLA 139
K NLL+ K VK+ DFGL+
Sbjct: 166 KSPNLLVDKK---YTVKVCDFGLS 186
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 226 ERVASIVHRQETVDCL---KKFNAR------RKLKVST---RQGFAGTPGYLSPEVLKKE 273
R IVHR L KK+ + +LK ST + AGTP +++PEVL+ E
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 274 PYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI 310
P + D+++ GVIL+ L P+ + + ++ A +
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKL-QHPNIVRLHDSI 58
G+++ V K T +A K++ + ++ D ++ E + + HP +V LH
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 79
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q E+ + V + V GG+L + + E A +I ++N+ H G+++RDLK +
Sbjct: 80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 139
Query: 119 NLLLASKAKGAAVKLADFGLAIE----------------------VQGEQQAW------F 150
N+LL S+ +KL D+G+ E ++GE +
Sbjct: 140 NVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 196
Query: 151 GVILYILLVGYPPF 164
GV+++ ++ G PF
Sbjct: 197 GVLMFEMMAGRSPF 210
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T F GTP Y++PE+L+ E YG VD WA GV+++ ++ G PF
Sbjct: 165 DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKL-QHPNIVRLHDSI 58
G+++ V K T +A K++ + ++ D ++ E + + HP +V LH
Sbjct: 16 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 75
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q E+ + V + V GG+L + + E A +I ++N+ H G+++RDLK +
Sbjct: 76 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 135
Query: 119 NLLLASKAKGAAVKLADFGLAIE----------------------VQGEQQAW------F 150
N+LL S+ +KL D+G+ E ++GE +
Sbjct: 136 NVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 192
Query: 151 GVILYILLVGYPPF 164
GV+++ ++ G PF
Sbjct: 193 GVLMFEMMAGRSPF 206
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T F GTP Y++PE+L+ E YG VD WA GV+++ ++ G PF
Sbjct: 161 DTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 41/264 (15%)
Query: 21 KIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTG--GELFE 78
K+ + K S +Q + +E R +KL+HPN ++ E+ +LV + G +L E
Sbjct: 47 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106
Query: 79 DIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG- 137
V ++ E + + L+ + + HS+ ++HRD+K N+LL ++ VKL DFG
Sbjct: 107 --VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGS 161
Query: 138 ----------------LAIEV---------QGEQQAW-FGVILYILLVGYPPFWDEDQHR 171
+A EV G+ W G+ L PP + + +
Sbjct: 162 ASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF--NMNA 219
Query: 172 LYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASI 231
+ A + P+ + + +N ++ L P R T+ LKH ++ RER ++
Sbjct: 220 MSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL-RERPPTV 278
Query: 232 VHR--QETVDCLKKFN--ARRKLK 251
+ Q T D +++ + RK+K
Sbjct: 279 IMDLIQRTKDAVRELDNLQYRKMK 302
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 258 FAGTPGYLSPEV---LKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
F GTP +++PEV + + Y VD+W+ G+ L PP ++
Sbjct: 171 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S A
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DAT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 108/258 (41%), Gaps = 36/258 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G+F V + + T A KII+ ++ + +++E + + P + + + S +
Sbjct: 38 GSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-EDIQQEITVLSQCDSPYVTKYYGSYLK 96
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENL 120
+ +++ + + GG D++ E + +++IL+ +++ HS +HRD+K N+
Sbjct: 97 DTKLWIIMEYLGGGSAL-DLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANV 155
Query: 121 LLASKAKGAAVKLADFGLAIEVQGEQ---------------------------QAW-FGV 152
LL+ + VKLADFG+A ++ Q W G+
Sbjct: 156 LLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGI 212
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRIT 212
L G PP + H + + P+ E + P K + L PS R T
Sbjct: 213 TAIELARGEPPH--SELHPMKVLFLIPKNNPPTLEGNYSKP-LKEFVEACLNKEPSFRPT 269
Query: 213 ASEALKHPWICQRERVAS 230
A E LKH +I + + S
Sbjct: 270 AKELLKHKFILRNAKKTS 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 255 RQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPP 297
R F GTP +++PEV+K+ Y DIW+ G+ L G PP
Sbjct: 181 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKL-QHPNIVRLHDSI 58
G+++ V K T +A K++ + ++ D ++ E + + HP +V LH
Sbjct: 31 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 90
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q E+ + V + V GG+L + + E A +I ++N+ H G+++RDLK +
Sbjct: 91 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 150
Query: 119 NLLLASKAKGAAVKLADFGLAIE----------------------VQGEQQAW------F 150
N+LL S+ +KL D+G+ E ++GE +
Sbjct: 151 NVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWAL 207
Query: 151 GVILYILLVGYPPF 164
GV+++ ++ G PF
Sbjct: 208 GVLMFEMMAGRSPF 221
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T F GTP Y++PE+L+ E YG VD WA GV+++ ++ G PF
Sbjct: 177 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S A
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DAT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 78
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMTGD 162
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 45 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 104 MDAN--LXQVIQMELDHER-MSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXT 157
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 158 LKILDFGLA 166
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 286 QARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 1 GAFSVVRRCV--QKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 58
G F VR+ V + ++ A K++ A D +++ REA+I +L +P IVRL
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLIGVC 79
Query: 59 QEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
Q E LV ++ GG L + +V RE ++ + + Q+ + + VHRDL
Sbjct: 80 QAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAA 138
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+LL ++ K++DFGL+
Sbjct: 139 RNVLLVNR---HYAKISDFGLS 157
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 78
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 79 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMTGD 162
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 81 EPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA +V G+ A K ++ + ++ RE + + + H NI+ L +
Sbjct: 35 GAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTP 94
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESVNHCHSNGVVHRDLKP 117
+ D+ EL + + + + E D S+ + Q+L + H HS G++HRDLKP
Sbjct: 95 QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+++ S +K+ DFGLA
Sbjct: 155 SNIVVKS---DCTLKILDFGLA 173
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 192 TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
T +A++L+++ML ++P KRI+ EAL+HP+I
Sbjct: 291 TSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
Score = 28.1 bits (61), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
+ T Y +PEV+ Y VDIW+ G I+ L+ G F D
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTD 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 33/194 (17%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA-RDFQKLEREARICRKL-QHPNIVRLHDSI 58
G+++ V K T +A +++ + ++ D ++ E + + HP +V LH
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
Q E+ + V + V GG+L + + E A +I ++N+ H G+++RDLK +
Sbjct: 123 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 182
Query: 119 NLLLASKAKGAAVKLADFGLAIE----------------------VQGEQQAW------F 150
N+LL S+ +KL D+G+ E ++GE +
Sbjct: 183 NVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWAL 239
Query: 151 GVILYILLVGYPPF 164
GV+++ ++ G PF
Sbjct: 240 GVLMFEMMAGRSPF 253
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 254 TRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T F GTP Y++PE+L+ E YG VD WA GV+++ ++ G PF
Sbjct: 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LXQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
GA +V G+ A K ++ + ++ RE + + + H NI+ L +
Sbjct: 33 GAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTP 92
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESVNHCHSNGVVHRDLKP 117
+ D+ EL + + + + E D S+ + Q+L + H HS G++HRDLKP
Sbjct: 93 QKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 152
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+++ S +K+ DFGLA
Sbjct: 153 SNIVVKSD---CTLKILDFGLA 171
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 192 TPEAKNLINQMLTVNPSKRITASEALKHPWI 222
T +A++L+++ML ++P KRI+ EAL+HP+I
Sbjct: 289 TSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
+ T Y +PEV+ Y + VDIW+ G I+ L+ G F D
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 85
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGD 169
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 85
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 86 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGD 169
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 22 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 78
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HRDL
Sbjct: 79 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 138
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 139 NCLV---GENHLVKVADFGLSRLMTGD 162
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 81
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 82 EPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 142 NCLV---GENHLVKVADFGLSRLMTGD 165
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LSQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 8/142 (5%)
Query: 1 GAFSVVRRCV--QKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI 58
G F VR+ V + ++ A K++ A D +++ REA+I +L +P IVRL
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA-DTEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 59 QEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVVHRDLKP 117
Q E LV ++ GG L + +V RE ++ + + Q+ + + VHR+L
Sbjct: 406 QAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAA 464
Query: 118 ENLLLASKAKGAAVKLADFGLA 139
N+LL ++ K++DFGL+
Sbjct: 465 RNVLLVNR---HYAKISDFGLS 483
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 74/255 (29%)
Query: 34 QKLEREARICRKLQHPNIVRLHD---SIQEENYH--YLVFDLVTG--GELFEDIVAREFY 86
+++ RE R+ HPNI+ L D +E H YLV +L+ ++ D R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVI 131
Query: 87 SEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG--------- 137
S + + IL ++ H GVVHRDL P N+LLA + + DF
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADA 188
Query: 138 ---------------LAIEVQG------------------EQQAWF-GVILY------IL 157
L ++ +G ++A F G Y +
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 158 LVGYPPFWDEDQHRLYAQIKAGAY------DYPSPEWDTVTPEAK----NLINQMLTVNP 207
+VG P D +++ A Y + P+ W V P A +LI +ML NP
Sbjct: 249 VVGTPKIEDV---VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305
Query: 208 SKRITASEALKHPWI 222
+RI+ +AL+HP+
Sbjct: 306 QRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 74/255 (29%)
Query: 34 QKLEREARICRKLQHPNIVRLHD---SIQEENYH--YLVFDLVTG--GELFEDIVAREFY 86
+++ RE R+ HPNI+ L D +E H YLV +L+ ++ D R
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD--QRIVI 131
Query: 87 SEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG--------- 137
S + + IL ++ H GVVHRDL P N+LLA + + DF
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLAREDTADA 188
Query: 138 ---------------LAIEVQG------------------EQQAWF-GVILY------IL 157
L ++ +G ++A F G Y +
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248
Query: 158 LVGYPPFWDEDQHRLYAQIKAGAY------DYPSPEWDTVTPEAK----NLINQMLTVNP 207
+VG P D +++ A Y + P+ W V P A +LI +ML NP
Sbjct: 249 VVGTPKIEDV---VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305
Query: 208 SKRITASEALKHPWI 222
+RI+ +AL+HP+
Sbjct: 306 QRRISTEQALRHPYF 320
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 28 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 84
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 85 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 144
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 145 NCLV---GENHLVKVADFGLSRLMTGD 168
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQ------KLEREARICRKLQHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ + RE + + + H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 85
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGD 169
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 24 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 80
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 81 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 141 NCLV---GENHLVKVADFGLSRLMTGD 164
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 85
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGD 169
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 82
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 143 NCLV---GENHLVKVADFGLSRLMTGD 166
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 81
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 82 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 141
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 142 NCLV---GENHLVKVADFGLSRLMTGD 165
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 82
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 143 NCLV---GENHLVKVADFGLSRLMTGD 166
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 85
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 86 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 145
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 146 NCLV---GENHLVKVADFGLSRLMTGD 169
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 37 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 93
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 94 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 153
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 154 NCLV---GENHLVKVADFGLSRLMTGD 177
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 53 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 112 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 165
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 166 LKILDFGLA 174
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 294 QARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 51 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 110 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 163
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 164 LKILDFGLA 172
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 292 QARDLLSKMLVIDPAKRISVDDALQHPYI 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 26 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 82
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HRDL
Sbjct: 83 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 142
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 143 NCLV---GENHLVKVADFGLSRLMTGD 166
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%), Gaps = 19/145 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQ 59
G +S V + + KI+ K + K++RE +I L+ PNI+ L D ++
Sbjct: 48 GKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKILENLRGGPNIITLADIVK 102
Query: 60 E--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVNHCHSNGVVHRD 114
+ LVF+ V + ++ Y ++ D + +IL+++++CHS G++HRD
Sbjct: 103 DPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRD 156
Query: 115 LKPENLLLASKAKGAAVKLADFGLA 139
+KP N+++ + + ++L D+GLA
Sbjct: 157 VKPHNVMIDHEHR--KLRLIDWGLA 179
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 53 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 112 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 165
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 166 LKILDFGLA 174
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 294 QARDLLSKMLVIDPAKRISVDDALQHPYI 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 90 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 149 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 202
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 203 LKILDFGLA 211
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 45 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 104 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 157
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 158 LKILDFGLA 166
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 286 QARDLLSKMLVIDPAKRISVDDALQHPYI 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 46 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 105 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 158
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 159 LKILDFGLA 167
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 287 QARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 46 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 105 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 158
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 159 LKILDFGLA 167
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 287 QARDLLSKMLVIDPAKRISVDDALQHPYI 315
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L +++E YLV +L
Sbjct: 90 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 149 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 202
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 203 LKILDFGLA 211
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 26/29 (89%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++P+KRI+ +AL+HP+I
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 54/220 (24%)
Query: 33 FQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS 92
FQ+ +RE I L HPNIV+L+ + N +V + V G+L+ ++ D +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLL--------DKA 116
Query: 93 HCIQ---------QILESVNHCHSNG--VVHRDLKPENLLLASKAKGAAV--KLADFGLA 139
H I+ I + + + +VHRDL+ N+ L S + A V K+ADFGL+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
Query: 140 IE-------------------VQGEQQAW--------FGVILYILLVGYPPF--WDEDQH 170
+ + E++++ F +ILY +L G PF + +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 171 RLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
+ I+ PE P +N+I + +P KR
Sbjct: 237 KFINMIREEGLRPTIPE--DCPPRLRNVIELCWSGDPKKR 274
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 252 VSTRQGFAGTPGYLSPEVL--KKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 309
V + G G +++PE + ++E Y + D ++ +ILY +L G PF D++ Y +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF---DEYS-YGK 235
Query: 310 IK 311
IK
Sbjct: 236 IK 237
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 109/274 (39%), Gaps = 69/274 (25%)
Query: 1 GAFSVVRRCVQKATGLEFAAK-IINTKKLSARDFQKLEREARICRKLQ-HPNIVRLHD-- 56
G F+ V +G E+A K +++ ++ R + +E +KL HPNIV+
Sbjct: 39 GGFAFVYEAQDVGSGREYALKRLLSNEEEKNR---AIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 57 SIQEENY-----HYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESVNHCHSN 108
SI +E +L+ + G+L E + E ++ Q +V H H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 109 G--VVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ----------------------- 143
++HRDLK ENLLL+++ +KL DFG A +
Sbjct: 156 KPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 144 ------------------GEQQ-AW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 183
GE+Q W G ILY+L PF D + R I G Y
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----IVNGKYSI 268
Query: 184 PSPEWDTVTPEAKNLINQMLTVNPSKRITASEAL 217
P DT +LI ML VNP +R++ +E +
Sbjct: 269 PP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 244 FNARRKLKVSTRQGFAGTPGYLSPEVL---KKEPYGKPVDIWACGVILYILLVGYPPFWD 300
++A+R+ V TP Y +PE++ P G+ DIWA G ILY+L PF D
Sbjct: 196 WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED 255
Query: 301 EDQHRL 306
+ R+
Sbjct: 256 GAKLRI 261
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 54 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 112
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 113 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 166
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 167 LKILDFGLA 175
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 295 QARDLLSKMLVIDASKRISVDEALQHPYI 323
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVG 294
F T Y +PEV+ Y + VDIW+ G I+ ++ G
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 53 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 111
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 112 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---CT 165
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 166 LKILDFGLA 174
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 294 QARDLLSKMLVIDASKRISVDEALQHPYI 322
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 46 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 104
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 105 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 158
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 159 LKILDFGLA 167
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 287 QARDLLSKMLVIDASKRISVDEALQHPYI 315
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 57 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 115
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 116 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 169
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 170 LKILDFGLA 178
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 298 QARDLLSKMLVIDASKRISVDEALQHPYI 326
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 35/169 (20%)
Query: 30 ARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEA 89
++ + + +EA++ L+HPNI+ L +E LV + GG L + + +
Sbjct: 47 SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI 106
Query: 90 DASHCIQQILESVNHCHSNGVV---HRDLKPENLLLASKAKGA-----AVKLADFGLAIE 141
+ + QI +N+ H +V HRDLK N+L+ K + +K+ DFGLA E
Sbjct: 107 LVNWAV-QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165
Query: 142 VQGEQQ-------AW-------------------FGVILYILLVGYPPF 164
+ AW +GV+L+ LL G PF
Sbjct: 166 WHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
+ F R+ +T+ AG +++PEV++ + K D+W+ GV+L+ LL G PF
Sbjct: 157 ITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 231 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 287
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ S + QI ++ + +HR+L
Sbjct: 288 EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 347
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 348 NCLV---GENHLVKVADFGLSRLMTGD 371
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 19/129 (14%)
Query: 23 INTKKLSARDFQKLEREARICRKL------QHPNIVRL------HDSIQEENYHYLVFDL 70
+ KKLS R FQ R R+L H NI+ L S++E Y+V +L
Sbjct: 52 VAIKKLS-RPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 71 VTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAA 130
+ ++ E E S+ + Q+L + H HS G++HRDLKP N+++ S
Sbjct: 111 MDAN--LCQVIQMELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCT 164
Query: 131 VKLADFGLA 139
+K+ DFGLA
Sbjct: 165 LKILDFGLA 173
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 25/29 (86%)
Query: 194 EAKNLINQMLTVNPSKRITASEALKHPWI 222
+A++L+++ML ++ SKRI+ EAL+HP+I
Sbjct: 293 QARDLLSKMLVIDASKRISVDEALQHPYI 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 46 LQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS-HCIQQILESVNH 104
L+ N V+ ++++++ ++ + G L++ I + + D +QILE++++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 105 CHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
HS G++HRDLKP N+ + + VK+ DFGLA V
Sbjct: 132 IHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVH 167
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 144 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 174
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 143
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 144 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 174
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEA---- 89
++ EA + +LQHPN+V L + ++ ++F + G+L E +V R +S+
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 116
Query: 90 ------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG 137
D H + QI + + S+ VVH+DL N+L+ K VK++D G
Sbjct: 117 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLG 173
Query: 138 LAIEV 142
L EV
Sbjct: 174 LFREV 178
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 35 KLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
+ +REAR +LQ P++V +HD + + Y+ L+ G +L + + + A
Sbjct: 80 RXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAI 139
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVIL 154
++QI +++ H+ G HRD+KPEN+L+++ L DFG+A E+ G +
Sbjct: 140 VRQIGSALDAAHAAGATHRDVKPENILVSAD---DFAYLVDFGIASATTDEKLTQLGNTV 196
Query: 155 YILLVGYPPFWDEDQHRLYAQIKA 178
L P + E A I A
Sbjct: 197 GTLYYXAPERFSESHATYRADIYA 220
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 163
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 164 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 194
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 19/125 (15%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEA---- 89
++ EA + +LQHPN+V L + ++ ++F + G+L E +V R +S+
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTD 133
Query: 90 ------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG 137
D H + QI + + S+ VVH+DL N+L+ K VK++D G
Sbjct: 134 DDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLG 190
Query: 138 LAIEV 142
L EV
Sbjct: 191 LFREV 195
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 144
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 145 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 175
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A KI+ + FQ E + RK +H NI+ + ++N +V G L
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLA-IVTQWCEGSSL 118
Query: 77 FEDIVAREF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
++ + +E + +Q + +++ H+ ++HRD+K N+ L +G VK+ D
Sbjct: 119 YKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGD 175
Query: 136 FGLA 139
FGLA
Sbjct: 176 FGLA 179
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/43 (27%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 259 AGTPGYLSPEVLKKE---PYGKPVDIWACGVILYILLVGYPPF 298
G+ +++PEV++ + P+ D+++ G++LY L+ G P+
Sbjct: 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQEENYHY--LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNIV+L D +++++ L+F+ V + V ++ D + I ++L+++++CH
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKALDYCH 142
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 143 SQGIMHRDVKPHNVMIDHELR--KLRLIDWGLA 173
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 54/220 (24%)
Query: 33 FQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS 92
FQ+ +RE I L HPNIV+L+ + N +V + V G+L+ ++ D +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLL--------DKA 116
Query: 93 HCIQ---------QILESVNHCHSNG--VVHRDLKPENLLLASKAKGAAV--KLADFG-- 137
H I+ I + + + +VHRDL+ N+ L S + A V K+ADFG
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
Query: 138 ----------------LAIEVQG-EQQAW--------FGVILYILLVGYPPF--WDEDQH 170
+A E G E++++ F +ILY +L G PF + +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 171 RLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
+ I+ PE P +N+I + +P KR
Sbjct: 237 KFINMIREEGLRPTIPE--DCPPRLRNVIELCWSGDPKKR 274
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 252 VSTRQGFAGTPGYLSPEVL--KKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 309
V + G G +++PE + ++E Y + D ++ +ILY +L G PF D++ Y +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF---DEYS-YGK 235
Query: 310 IK 311
IK
Sbjct: 236 IK 237
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 43 GQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTL 99
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y+V + + G L + + RE + + QI ++ + +HRDL
Sbjct: 100 EPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAAR 159
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 160 NCLV---GENHVVKVADFGLSRLMTGD 183
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 244 FNARRKLKVSTRQGFAGTP---GYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFW 299
F R + T AG + +PE L + D+WA GV+L+ I G P+
Sbjct: 174 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP 233
Query: 300 DEDQHRLYAQIKAGAYDDEPK 320
D ++Y ++ G ++P+
Sbjct: 234 GIDLSQVYDLLEKGYRMEQPE 254
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 48/173 (27%)
Query: 95 IQQILESVNHCHS-NGVVHRDLKPENLLLASKAKGAAVKLADFG-----LAIEVQGEQQA 148
I+ +L S ++ H+ + HRD+KP N+L+ K VKL+DFG + +++G +
Sbjct: 157 IKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVDKKIKGSRGT 213
Query: 149 W-----------------------FGVILYILLVGYPPF-WDEDQHRLYAQIKAGAYDYP 184
+ G+ LY++ PF L+ I+ +YP
Sbjct: 214 YEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYP 273
Query: 185 ---------------SPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
+ + ++ E + + L NP++RIT+ +ALKH W+
Sbjct: 274 LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 256 QGFAGTPGYLSPEVLKKEPY--GKPVDIWACGVILYILLVGYPPF 298
+G GT ++ PE E G VDIW+ G+ LY++ PF
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+F D +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKF--SLDLAS 112
Query: 94 CI---QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ------- 143
I Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTXXKA 169
Query: 144 ---------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGA 180
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 230 -RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 35 KLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
K +EARI ++ HPNIVRL ++ Y+V +LV GG+ F A
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL------TFLRTEGARLR 211
Query: 95 IQQILESVN-------HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
++ +L+ V + S +HRDL N L+ K +K++DFG++ E
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSRE 262
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 35 KLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
K +EARI ++ HPNIVRL ++ Y+V +LV GG+ F A
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL------TFLRTEGARLR 211
Query: 95 IQQILESVN-------HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIE 141
++ +L+ V + S +HRDL N L+ K +K++DFG++ E
Sbjct: 212 VKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSRE 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 228 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 284
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HR+L
Sbjct: 285 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 344
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 345 NCLV---GENHLVKVADFGLSRLMTGD 368
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G + V V K L A K + + +F K EA + ++++HPN+V+L
Sbjct: 270 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK---EAAVMKEIKHPNLVQLLGVCTR 326
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
E Y++ + +T G L + + R+ + + QI ++ + +HR+L
Sbjct: 327 EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAAR 386
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGE 145
N L+ + VK+ADFGL+ + G+
Sbjct: 387 NCLV---GENHLVKVADFGLSRLMTGD 410
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD--SI 58
G F V + + TG + A K + + RE +I + L+H N+V L +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 59 QEENYH------YLVFDLVTG--GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGV 110
+ Y+ YLVFD L +++ + ++ ++ +Q +L + + H N +
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+K N+L+ + +KLADFGLA
Sbjct: 147 LHRDMKAANVLI---TRDGVLKLADFGLA 172
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 264 YLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPFW-DEDQHRL 306
Y PE+L E YG P+D+W G I+ + P + +QH+L
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD--SI 58
G F V + + TG + A K + + RE +I + L+H N+V L +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 59 QEENYH------YLVFDLVTG--GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGV 110
+ Y+ YLVFD L +++ + ++ ++ +Q +L + + H N +
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+K N+L+ + +KLADFGLA
Sbjct: 147 LHRDMKAANVLI---TRDGVLKLADFGLA 172
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 264 YLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPF-WDEDQHRL 306
Y PE+L E YG P+D+W G I+ + P + +QH+L
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD--SI 58
G F V + + TG + A K + + RE +I + L+H N+V L +
Sbjct: 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87
Query: 59 QEENYH------YLVFDLVTG--GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGV 110
+ Y+ YLVFD L +++ + ++ ++ +Q +L + + H N +
Sbjct: 88 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKI 145
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+K N+L+ + +KLADFGLA
Sbjct: 146 LHRDMKAANVLI---TRDGVLKLADFGLA 171
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 264 YLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPFW-DEDQHRL 306
Y PE+L E YG P+D+W G I+ + P + +QH+L
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 238
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD--SI 58
G F V + + TG + A K + + RE +I + L+H N+V L +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 59 QEENYH------YLVFDLVTG--GELFEDIVAREFYSEADASHCIQQILESVNHCHSNGV 110
+ Y+ YLVFD L +++ + ++ ++ +Q +L + + H N +
Sbjct: 89 KASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQMLLNGLYYIHRNKI 146
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+K N+L+ + +KLADFGLA
Sbjct: 147 LHRDMKAANVLI---TRDGVLKLADFGLA 172
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 264 YLSPEVLKKE-PYGKPVDIWACGVILYILLVGYPPFW-DEDQHRL 306
Y PE+L E YG P+D+W G I+ + P + +QH+L
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 103/270 (38%), Gaps = 52/270 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G FS V G +A K I + +D ++ +REA + R HPNI+RL
Sbjct: 40 GGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 61 E----NYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVNHCHSNGVVH 112
E + +L+ G L+ +I + F +E + I + H+ G H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAH 157
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLA-IEVQGEQQA-----W--------------FGV 152
RDLKP N+LL + + + L A I V+G +QA W F V
Sbjct: 158 RDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSV 217
Query: 153 ILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKN--------------- 197
+ ++ W G YD + D+V +N
Sbjct: 218 QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALW 277
Query: 198 -LINQMLTVNPSKR------ITASEALKHP 220
L+N M+TV+P +R ++ EAL+ P
Sbjct: 278 QLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 240 CLKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPY---GKPVDIWACGVILYILLVGYP 296
C+ +R+ L + T Y +PE+ + + + D+W+ G +LY ++ G
Sbjct: 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
Query: 297 PF 298
P+
Sbjct: 245 PY 246
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 92/220 (41%), Gaps = 54/220 (24%)
Query: 33 FQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS 92
FQ+ +RE I L HPNIV+L+ + N +V + V G+L+ ++ D +
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLL--------DKA 116
Query: 93 HCIQ---------QILESVNHCHSNG--VVHRDLKPENLLLASKAKGAAV--KLADFGLA 139
H I+ I + + + +VHRDL+ N+ L S + A V K+ADF L+
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
Query: 140 IE-------------------VQGEQQAW--------FGVILYILLVGYPPF--WDEDQH 170
+ + E++++ F +ILY +L G PF + +
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI 236
Query: 171 RLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKR 210
+ I+ PE P +N+I + +P KR
Sbjct: 237 KFINMIREEGLRPTIPE--DCPPRLRNVIELCWSGDPKKR 274
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 252 VSTRQGFAGTPGYLSPEVL--KKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQ 309
V + G G +++PE + ++E Y + D ++ +ILY +L G PF D++ Y +
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF---DEYS-YGK 235
Query: 310 IK 311
IK
Sbjct: 236 IK 237
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 113
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 230 RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 113
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 114 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKAS 170
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 171 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 229
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 230 RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 118
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 119 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKAS 175
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 234
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 235 RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 266
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 119/313 (38%), Gaps = 93/313 (29%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP------NIVRL 54
G+F V + A K++ +K R ++ E RI L+ N++ +
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGVVH 112
++ N+ + F+L++ L+E I +F +S IL+ ++ H N ++H
Sbjct: 165 LENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAI----EVQGEQQAWF------------------ 150
DLKPEN+LL + + + +K+ DFG + V Q+ F
Sbjct: 224 CDLKPENILLKQQGR-SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 151 ---GVILYILLVGYPPFWDED----------------QHRLYAQIKAGAYDYPS--PEWD 189
G IL LL GYP ED Q L A +A + P +
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYC 342
Query: 190 TVT----------------------PEAK---------------NLINQMLTVNPSKRIT 212
TVT PE++ + + Q L +P+ R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 213 ASEALKHPWICQR 225
+AL+HPW+ +R
Sbjct: 403 PGQALRHPWLRRR 415
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
Y +PEV+ YG P+D+W+ G IL LL GYP ED+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 110
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 111 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKAS 167
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 168 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 226
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 227 RLPMP--PNCPPTLYSLMTKCWAYDPSRRPRFTE 258
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 141
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 142 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKAS 198
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 257
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 258 RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 289
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 116/313 (37%), Gaps = 93/313 (29%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP------NIVRL 54
G+F V + A K++ +K R ++ E RI L+ N++ +
Sbjct: 108 GSFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGVVH 112
++ N+ + F+L++ L+E I +F +S IL+ ++ H N ++H
Sbjct: 165 LENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAI----EVQGEQQAWF------------------ 150
DLKPEN+LL + + + +K+ DFG + V Q+ F
Sbjct: 224 CDLKPENILLKQQGR-SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDM 282
Query: 151 ---GVILYILLVGYPPFWDED----------------QHRLYAQIKAGAY----DYP--- 184
G IL LL GYP ED Q L A +A + YP
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYC 342
Query: 185 ---------------------------SPEWDTVT-----PEAKNLINQMLTVNPSKRIT 212
S EW P + + Q L +P+ R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 213 ASEALKHPWICQR 225
+AL+HPW+ +R
Sbjct: 403 PGQALRHPWLRRR 415
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
Y +PEV+ YG P+D+W+ G IL LL GYP ED+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 115
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 116 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 231
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 232 RLPMP--PNCPPTLYSLMTKCWAYDPSRRPRFTE 263
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+F D +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKF--SLDLAS 492
Query: 94 CI---QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ------- 143
I Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKA 549
Query: 144 ---------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGA 180
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 610 -RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 641
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 40/214 (18%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+ YS AS
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK-YSLDLASL 116
Query: 94 CIQ--QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ-------- 143
+ Q+ ++ + S VHRD+ N+L++S VKL DFGL+ ++
Sbjct: 117 ILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN---DCVKLGDFGLSRYMEDSTYYKAS 173
Query: 144 --------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAY 181
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 174 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE- 232
Query: 182 DYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 233 RLPMP--PNCPPTLYSLMTKCWAYDPSRRPRFTE 264
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+F D +
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKF--SLDLAS 112
Query: 94 CI---QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ------- 143
I Q+ ++ + S VHRD+ N+L+++ VKL DFGL+ ++
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKA 169
Query: 144 ---------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGA 180
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 170 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 229
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 230 -RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 261
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 39 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 97
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 98 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 153
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 154 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
Query: 155 YILLVGYPPFWD--EDQHRLYAQIKAG-AYDYPS-PEWDTVTPEAKNLINQMLTVNPSKR 210
Y + G PF +L+A I ++P PE D ++++ L +P +R
Sbjct: 214 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD-----LQDVLKCCLKRDPKQR 268
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 269 ISIPELLAHPYV 280
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 173 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 35 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 93
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 94 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 149
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
Query: 155 YILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKR 210
Y + G PF ++ QI K A P+ E D + ++++ L +P +R
Sbjct: 210 YYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 264
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 265 ISIPELLAHPYV 276
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 169 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 141
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 197
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 155 YILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKR 210
Y + G PF ++ QI K A P+ E D + ++++ L +P +R
Sbjct: 258 YYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 313 ISIPELLAHPYV 324
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 217 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 36 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 94
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 95 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 150
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
Query: 155 YILLVGYPPFWD--EDQHRLYAQIKAG-AYDYPS-PEWDTVTPEAKNLINQMLTVNPSKR 210
Y + G PF +L+A I ++P PE D ++++ L +P +R
Sbjct: 211 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKD-----LQDVLKCCLKRDPKQR 265
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 266 ISIPELLAHPYV 277
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 170 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 55 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 113
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 114 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 169
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 155 YILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKR 210
Y + G PF ++ QI K A P+ E D + ++++ L +P +R
Sbjct: 230 YYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 285 ISIPELLAHPYV 296
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 141
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 197
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 155 YILLVGYPPFWD--EDQHRLYAQIKAG-AYDYPS-PEWDTVTPEAKNLINQMLTVNPSKR 210
Y + G PF +L+A I ++P PE D ++++ L +P +R
Sbjct: 258 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-----QDVLKCCLKRDPKQR 312
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 313 ISIPELLAHPYV 324
Score = 28.1 bits (61), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 11/50 (22%)
Query: 260 GTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
G Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 83 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 141
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 142 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 197
Query: 136 FGLAIEVQGEQQA----------------------------------------W-FGVIL 154
FG+A ++Q + + W G IL
Sbjct: 198 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
Query: 155 YILLVGYPPFWD--EDQHRLYAQIKAG-AYDYPS-PEWDTVTPEAKNLINQMLTVNPSKR 210
Y + G PF +L+A I ++P PE D ++++ L +P +R
Sbjct: 258 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-----QDVLKCCLKRDPKQR 312
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 313 ISIPELLAHPYV 324
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 11/50 (22%)
Query: 260 GTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 57/252 (22%)
Query: 18 FAAKIINTKKLSARDFQKLEREARICRKLQH--PNIVRLHDSIQEENYHYLVFDLVTGGE 75
+A K +N ++ + E KLQ I+RL+D + Y Y+V + +
Sbjct: 55 YAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNID 113
Query: 76 LFEDIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
L + ++ + + +LE+V+ H +G+VH DLKP N L+ +KL D
Sbjct: 114 LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLID 169
Query: 136 FGLAIEVQGE----------------------------------------QQAW-FGVIL 154
FG+A ++Q + W G IL
Sbjct: 170 FGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 155 YILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEW---DTVTPEAKNLINQMLTVNPSKR 210
Y + G PF ++ QI K A P+ E D + ++++ L +P +R
Sbjct: 230 YYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 211 ITASEALKHPWI 222
I+ E L HP++
Sbjct: 285 ISIPELLAHPYV 296
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 11/51 (21%)
Query: 259 AGTPGYLSPEVLKKEPYGKP-----------VDIWACGVILYILLVGYPPF 298
GT Y+ PE +K + D+W+ G ILY + G PF
Sbjct: 189 VGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 118/313 (37%), Gaps = 93/313 (29%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP------NIVRL 54
G F V + A K++ +K R ++ E RI L+ N++ +
Sbjct: 108 GXFGQVVKAYDHKVHQHVALKMVRNEK---RFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGVVH 112
++ N+ + F+L++ L+E I +F +S IL+ ++ H N ++H
Sbjct: 165 LENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLAI----EVQGEQQAWF------------------ 150
DLKPEN+LL + + + +K+ DFG + V Q+ F
Sbjct: 224 CDLKPENILLKQQGR-SGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDM 282
Query: 151 ---GVILYILLVGYPPFWDED----------------QHRLYAQIKAGAYDYPS--PEWD 189
G IL LL GYP ED Q L A +A + P +
Sbjct: 283 WSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYC 342
Query: 190 TVT----------------------PEAK---------------NLINQMLTVNPSKRIT 212
TVT PE++ + + Q L +P+ R+T
Sbjct: 343 TVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402
Query: 213 ASEALKHPWICQR 225
+AL+HPW+ +R
Sbjct: 403 PGQALRHPWLRRR 415
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQ 303
Y +PEV+ YG P+D+W+ G IL LL GYP ED+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCH 106
PNI+ L D +++ LVF+ V + + R+ ++ D + +IL+++++CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ---LRQTLTDYDIRFYMYEILKALDYCH 148
Query: 107 SNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 47 QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHC 105
QHP VRL + +E YL +L G L + A EA ++ L ++ H
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
HS G+VH D+KP N+ L + + KL DFGL +E+
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVEL 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 56/304 (18%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ 59
G + V + TG A K+++ ++ + +++++E + +K H NI + +
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 60 EEN------YHYLVFDLVTGG---ELFEDIVAREFYSEADASHCIQQILESVNHCHSNGV 110
++N +LV + G +L ++ E A C ++IL ++H H + V
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC-REILRGLSHLHQHKV 150
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ---GEQQAWFGVILYI----------- 156
+HRD+K +N+LL A+ VKL DFG++ ++ G + + G ++
Sbjct: 151 IHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENP 207
Query: 157 -------------------LLVGYPPFWDEDQHR-LYAQIKAGAYDYPSPEWDTVTPEAK 196
+ G PP D R L+ + A S +W + + +
Sbjct: 208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQ 264
Query: 197 NLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQ 256
+ I L N S+R + +KHP+I R++ R + D + + +R K T
Sbjct: 265 SFIESCLVKNHSQRPATEQLMKHPFI--RDQPNERQVRIQLKDHIDRTKKKRGEKDETEY 322
Query: 257 GFAG 260
++G
Sbjct: 323 EYSG 326
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 252 VSTRQGFAGTPGYLSPEVL--KKEP---YGKPVDIWACGVILYILLVGYPPFWD 300
V R F GTP +++PEV+ + P Y D+W+ G+ + G PP D
Sbjct: 183 VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 LQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS-HCIQQILESVNH 104
L+ N V+ ++++++ ++ + L++ I + + D +QILE++++
Sbjct: 72 LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 105 CHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
HS G++HRDLKP N+ + + VK+ DFGLA V
Sbjct: 132 IHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVH 167
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
+ T K Q EA + + LQH +VRL+ + +E Y++ + + G L D +
Sbjct: 41 VKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLL-DFLK 99
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ + I QI E + + +HRDL+ N+L+ ++ K+ADFGLA
Sbjct: 100 SDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLA 156
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 32 DFQKLEREARICRKLQHPNIVRLHD-----SIQEENYHYLVFDLVTGG--ELFEDIVARE 84
D +++ RE I +L H ++V++ D +++ + Y+V ++ +LF V
Sbjct: 95 DCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--- 151
Query: 85 FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
+ +E + +L V + HS G++HRDLKP N L+ + +VK+ DFGLA V
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTV 206
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 192 TPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASI 231
+ +A +L+ +ML NP+KRIT +E L HP+ + R+A +
Sbjct: 370 SADAIHLLKRMLVFNPNKRITINECLAHPFF-KEVRIAEV 408
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 42/215 (19%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASH 93
+K +EA R+ HP+IV+L I E N +++ +L T GEL + R+F D +
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKF--SLDLAS 492
Query: 94 CI---QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ------- 143
I Q+ ++ + S VHRD+ N+L+++ VKL DFGL+ ++
Sbjct: 493 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKA 549
Query: 144 ---------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGA 180
W FGV ++ IL+ G PF + + +I+ G
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASE 215
P P P +L+ + +PS+R +E
Sbjct: 610 -RLPMPP--NCPPTLYSLMTKCWAYDPSRRPRFTE 641
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I KL H NIVR + +++ +L+ GG+
Sbjct: 62 LQVAVKTL-PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 121 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 175 TCPGPGRVAKIGDFGMARDI 194
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 271
Query: 323 SASVVK 328
V +
Sbjct: 272 PGPVYR 277
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K I +S DF + EA + KL HP +V+L+ E+ LVF+ + G L +
Sbjct: 35 AIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 79 DIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
+ + F +E C+ + E + + V+HRDL N L+ + +K++DF
Sbjct: 92 YLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASVIHRDLAARNCLV---GENQVIKVSDF 147
Query: 137 GLAIEVQGEQ 146
G+ V +Q
Sbjct: 148 GMTRFVLDDQ 157
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
+ SPEV Y D+W+ GV+++ + G P+ + + I G +P+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 323 SASV 326
S V
Sbjct: 230 STHV 233
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I KL H NIVR + +++ +L+ GG+
Sbjct: 76 LQVAVKTL-PEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 134
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 135 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 188
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 189 TCPGPGRVAKIGDFGMARDI 208
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 285
Query: 323 SASVVK 328
V +
Sbjct: 286 PGPVYR 291
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
+ T K Q EA + + LQH +VRL+ + E Y++ + + G L D +
Sbjct: 42 VKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLL-DFLK 100
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ + I QI E + + +HRDL+ N+L+ ++ K+ADFGLA
Sbjct: 101 SDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLA 157
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
Query: 50 NIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS 107
NI++L D++++ LVF+ + + F+ + + ++ D + ++L+++++CHS
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLY--QILTDFDIRFYMYELLKALDYCHS 155
Query: 108 NGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
G++HRD+KP N+++ + K ++L D+GLA
Sbjct: 156 KGIMHRDVKPHNVMIDHQQK--KLRLIDWGLA 185
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA +L++++L + +R+TA EA++HP+
Sbjct: 299 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 58/92 (63%), Gaps = 7/92 (7%)
Query: 50 NIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHS 107
NI++L D++++ LVF+ + + F+ + + ++ D + ++L+++++CHS
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTD-FKQLY--QILTDFDIRFYMYELLKALDYCHS 150
Query: 108 NGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
G++HRD+KP N+++ + K ++L D+GLA
Sbjct: 151 KGIMHRDVKPHNVMIDHQQK--KLRLIDWGLA 180
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 25/32 (78%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA +L++++L + +R+TA EA++HP+
Sbjct: 294 VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHP-NIVRLHDS 57
G+F + A G E A K+ + TK +L E++I + +Q I +
Sbjct: 20 GSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWC 73
Query: 58 IQEENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
E +Y+ +V +L+ G ED+ +R+F S Q++ + + HS +HRD
Sbjct: 74 GAEGDYNVMVMELL--GPSLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRD 130
Query: 115 LKPENLLLASKAKGAAVKLADFGLA 139
+KP+N L+ KG V + DFGLA
Sbjct: 131 VKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 19/117 (16%)
Query: 38 REARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGGELFEDIVAREFYSEADAS--- 92
RE + R+L+HPN++ L + +L+FD +L+ I +F+ + A+
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHII---KFHRASKANKKP 122
Query: 93 ---------HCIQQILESVNHCHSNGVVHRDLKPENLLLASKA-KGAAVKLADFGLA 139
+ QIL+ +++ H+N V+HRDLKP N+L+ + + VK+AD G A
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 179
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 191 VTPEAK--NLINQMLTVNPSKRITASEALKHPWICQ 224
V P++K +L+ ++LT++P KRIT+ +A++ P+ +
Sbjct: 304 VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE 339
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 264 YLSPEVL-KKEPYGKPVDIWACGVILYILLVGYPPF 298
Y +PE+L Y K +DIWA G I LL P F
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K I +S DF + EA + KL HP +V+L+ E+ LVF+ + G L +
Sbjct: 33 AIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 79 DIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
+ + F +E C+ + E + + V+HRDL N L+ + +K++DF
Sbjct: 90 YLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDF 145
Query: 137 GLAIEVQGEQ 146
G+ V +Q
Sbjct: 146 GMTRFVLDDQ 155
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
+ SPEV Y D+W+ GV+++ + G P+ + + I G +P+
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 227
Query: 323 SASV 326
S V
Sbjct: 228 STHV 231
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K I +S DF + EA + KL HP +V+L+ E+ LVF+ + G L +
Sbjct: 38 AIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 94
Query: 79 DIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
+ + F +E C+ + E + + V+HRDL N L+ + +K++DF
Sbjct: 95 YLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDF 150
Query: 137 GLAIEVQGEQ 146
G+ V +Q
Sbjct: 151 GMTRFVLDDQ 160
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
+ SPEV Y D+W+ GV+++ + G P+ + + I G +P+
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 232
Query: 323 SASV 326
S V
Sbjct: 233 STHV 236
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
+ T K + + EA + + LQH +V+LH + +E Y++ + + G L D +
Sbjct: 44 VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLL-DFLK 101
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ S+ I QI E + +HRDL+ N+L+++ K+ADFGLA
Sbjct: 102 SDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLA 158
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 1 GAFSVVRRCVQKATGLEFAAKI--INTKKLSARDFQKLEREARICRKLQHP-NIVRLHDS 57
G+F + A G E A K+ + TK +L E++I + +Q I +
Sbjct: 18 GSFGDIYLGTDIAAGEEVAIKLECVKTKH------PQLHIESKIYKMMQGGVGIPTIRWC 71
Query: 58 IQEENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESVNHCHSNGVVHRD 114
E +Y+ +V +L+ G ED+ +R+F S Q++ + + HS +HRD
Sbjct: 72 GAEGDYNVMVMELL--GPSLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRD 128
Query: 115 LKPENLLLASKAKGAAVKLADFGLA 139
+KP+N L+ KG V + DFGLA
Sbjct: 129 VKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 38/182 (20%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 106
Query: 77 FEDIVAREFYSEADASHCI-QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + A E E I +Q +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGD 163
Query: 136 FGLAIEV-------QGEQQA----W----------------------FGVILYILLVGYP 162
FGLA E Q EQ + W FG++LY L+ G
Sbjct: 164 FGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
Query: 163 PF 164
P+
Sbjct: 224 PY 225
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLKKE---PYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ + PY D++A G++LY L+ G P+
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K I +S DF + EA + KL HP +V+L+ E+ LVF+ + G L +
Sbjct: 35 AIKTIREGAMSEEDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 91
Query: 79 DIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
+ + F +E C+ + E + + V+HRDL N L+ + +K++DF
Sbjct: 92 YLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDF 147
Query: 137 GLAIEVQGEQ 146
G+ V +Q
Sbjct: 148 GMTRFVLDDQ 157
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
+ SPEV Y D+W+ GV+++ + G P+ + + I G +P+
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 229
Query: 323 SASV 326
S V
Sbjct: 230 STHV 233
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K I +S DF + EA + KL HP +V+L+ E+ LVF+ + G L +
Sbjct: 55 AIKTIKEGSMSEDDFIE---EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 111
Query: 79 DIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
+ + F +E C+ + E + + V+HRDL N L+ + +K++DF
Sbjct: 112 YLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDF 167
Query: 137 GLAIEVQGEQ 146
G+ V +Q
Sbjct: 168 GMTRFVLDDQ 177
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
+ SPEV Y D+W+ GV+++ + G P+ + + I G +P+
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA 249
Query: 323 SASV 326
S V
Sbjct: 250 STHV 253
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 36/156 (23%)
Query: 34 QKLEREARICRKLQHPNIVRLH--------------DSIQEENYH--------------- 64
+K ERE + KL H NIV + DS++ +Y
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCL 109
Query: 65 YLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
++ + G L + I R E + A +QI + V++ HS ++HRDLKP N+ L
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL 169
Query: 123 ASKAKGAAVKLADFGLAIEVQ--GEQQAWFGVILYI 156
+ VK+ DFGL ++ G++ G + Y+
Sbjct: 170 VDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYM 202
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILL 292
GT Y+SPE + + YGK VD++A G+IL LL
Sbjct: 197 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+L+ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVLIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 60 EENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESVNHCHSNGVVHRDLK 116
E +Y+ +V +L+ G ED+ +R+F S Q++ + + HS +HRD+K
Sbjct: 76 EGDYNVMVMELL--GPSLEDLFNFCSRKF-SLKTVLLLADQMISRIEYIHSKNFIHRDVK 132
Query: 117 PENLLLASKAKGAAVKLADFGLA 139
P+N L+ KG V + DFGLA
Sbjct: 133 PDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ 59
G F V +CV++ G +A K + D Q RE L QH ++VR +
Sbjct: 20 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
E+++ + + GG L + I ++ EA+ + Q+ + + HS +VH D+
Sbjct: 80 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDI 139
Query: 116 KPENLLLA 123
KP N+ ++
Sbjct: 140 KPSNIFIS 147
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ 59
G F V +CV++ G +A K + D Q RE L QH ++VR +
Sbjct: 22 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 81
Query: 60 EENYHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
E+++ + + GG L + I ++ EA+ + Q+ + + HS +VH D+
Sbjct: 82 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDI 141
Query: 116 KPENLLLA 123
KP N+ ++
Sbjct: 142 KPSNIFIS 149
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ 59
G F V +CV++ G +A K + D Q RE L QH ++VR +
Sbjct: 18 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 77
Query: 60 EENYHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
E+++ + + GG L + I ++ EA+ + Q+ + + HS +VH D+
Sbjct: 78 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDI 137
Query: 116 KPENLLLA 123
KP N+ ++
Sbjct: 138 KPSNIFIS 145
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
+ T K + + EA + + LQH +V+LH + +E Y++ + + G L D +
Sbjct: 211 VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLL-DFLK 268
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ S+ I QI E + +HRDL+ N+L+++ K+ADFGLA
Sbjct: 269 SDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLA 325
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 107/257 (41%), Gaps = 33/257 (12%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
E A ++I+ ++ + + +RE R+ +H N+V + + ++ L G L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 77 FEDIVAREFYSEADASHCI-QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + + + I Q+I++ + + H+ G++H+DLK +N+ + V + D
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDN----GKVVITD 172
Query: 136 FGLAIEVQGEQQA------------WFGVILYILLVGYPPFWDED-----QHRLYAQIKA 178
FGL + G QA W + ++ P +ED +H +
Sbjct: 173 FGL-FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT 231
Query: 179 GAYDYPSPEWDTVTPEAKNLINQMLT--------VNPSKRITASEALKHPWICQRERVAS 230
Y+ + EW T A+ +I QM T + K I S+ L W ++E +
Sbjct: 232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEI--SDILLFCWAFEQEERPT 289
Query: 231 IVHRQETVDCLKKFNAR 247
+ ++ L K N R
Sbjct: 290 FTKLMDMLEKLPKRNRR 306
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
+ T K + + EA + + LQH +V+LH + +E Y++ + + G L D +
Sbjct: 217 VKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLL-DFLK 274
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ S+ I QI E + +HRDL+ N+L+++ K+ADFGLA
Sbjct: 275 SDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA---SLVCKIADFGLA 331
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 5/128 (3%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQ 59
G F V +CV++ G +A K + D Q RE L QH ++VR +
Sbjct: 20 GEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA 79
Query: 60 EENYHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESVNHCHSNGVVHRDL 115
E+++ + + GG L + I ++ EA+ + Q+ + + HS +VH D+
Sbjct: 80 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDI 139
Query: 116 KPENLLLA 123
KP N+ ++
Sbjct: 140 KPSNIFIS 147
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 119/299 (39%), Gaps = 65/299 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSA----RDFQKLER----EARICRKLQHPNI- 51
AF V+R+ G + I+ KK A R+ +K R EA I +K+Q+ +I
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDIN 94
Query: 52 ----VRLHDSIQEENYHYLVFDLVTGGELFEDIVARE----FYSEADASHCIQQILESVN 103
V+ H ++ L+F+ + G L+E I+ R F+ E +CI+ IL+++N
Sbjct: 95 NNNIVKYHGKFMYYDHMCLIFEPL-GPSLYE-IITRNNYNGFHIEDIKLYCIE-ILKALN 151
Query: 104 HCHSNGVVHRDLKPENLLLAS----------------------KAKGAAVKLADFGLAIE 141
+ + H DLKPEN+LL + K +KL DFG A
Sbjct: 152 YLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF 211
Query: 142 VQGEQQAWFGVILY-----ILLVGYPPFWDEDQHR-----LYAQIKAGAYDYPSPEW--- 188
+ Y IL +G WD + A++ G+ + + E
Sbjct: 212 KSDYHGSIINTRQYRAPEVILNLG----WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267
Query: 189 -----DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLK 242
+ P KN++ + N SK + E LK W + SI H ++ + K
Sbjct: 268 LAMMESIIQPIPKNMLYEATKTNGSKYVNKDE-LKLAWPENASSINSIKHVKKCLPLYK 325
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L +V G L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSL 106
Query: 77 FEDIVAREFYSEADASHCI-QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + A E E I +Q +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGD 163
Query: 136 FGLAIE 141
FGLA E
Sbjct: 164 FGLATE 169
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLKKE---PYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ + PY D++A G++LY L+ G P+
Sbjct: 182 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 53 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 111
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 112 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 165
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 166 TCPGPGRVAKIGDFGMARDI 185
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 262
Query: 323 SASVVK 328
V +
Sbjct: 263 PGPVYR 268
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQH----PNIVRLHD 56
G+F + T E A K+ N K +L E++I R LQ PN+
Sbjct: 18 GSFGEIYLGTNIQTNEEVAIKLENVKT----KHPQLLYESKIYRILQGGTGIPNVRWFG- 72
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI----QQILESVNHCHSNGVVH 112
E +Y+ LV DL+ G ED+ F S + + Q++ V HS +H
Sbjct: 73 --VEGDYNVLVMDLL--GPSLEDLF--NFCSRKLSLKTVLMLADQMINRVEFVHSKSFLH 126
Query: 113 RDLKPENLLLASKAKGAAVKLADFGLA 139
RD+KP+N L+ + V + DFGLA
Sbjct: 127 RDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 1 GAFSVVRRCVQKATGLEFA-AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD--- 56
G F V+ +K+TG+ A K+I + R+ Q ++ A L HPNIV+L
Sbjct: 34 GTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLA----VLHHPNIVQLQSYFY 89
Query: 57 SIQEENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQ------QILESVN--HC 105
++ E + + ++V E D + R +Y A I Q++ S+ H
Sbjct: 90 TLGERDRRDIYLNVVM--EYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
S V HRD+KP N+L+ ++A G +KL DFG A
Sbjct: 148 PSVNVCHRDIKPHNVLV-NEADG-TLKLCDFGSA 179
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 46 LQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS-HCIQQILESVNH 104
L+ N V+ ++++++ ++ + L++ I + + D +QILE++++
Sbjct: 72 LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131
Query: 105 CHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
HS G++HR+LKP N+ + + VK+ DFGLA V
Sbjct: 132 IHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVH 167
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 68/180 (37%), Gaps = 55/180 (30%)
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGL---------------- 138
I Q+ +V HS G+ HRD+KP+NLL+ SK +KL DFG
Sbjct: 147 IYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN--TLKLCDFGSAKKLIPSEPSVAXICS 204
Query: 139 -----------AIEVQGEQQAW-FGVILYILLVGYPPFWDE---DQHRLYAQIKAGAYD- 182
A E W G + L++G P F E DQ QI
Sbjct: 205 RFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKE 264
Query: 183 -------------YPS---PEWDTVTPE-----AKNLINQMLTVNPSKRITASEALKHPW 221
+P+ +W + PE A +L+ Q+L P RI EA+ HP+
Sbjct: 265 QMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 26 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREF 85
K + + +K EA I + L HP+IV+L I+EE +++ +L GEL
Sbjct: 62 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGEL-----GHYL 115
Query: 86 YSEADASHCIQQILESVNHC------HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ + +L S+ C S VHRD+ N+L+AS VKL DFGL+
Sbjct: 116 ERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASP---ECVKLGDFGLS 172
Query: 140 IEVQGEQ 146
++ E
Sbjct: 173 RYIEDED 179
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 62 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 121 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 175 TCPGPGRVAKIGDFGMARDI 194
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 271
Query: 323 SASVVK 328
V +
Sbjct: 272 PGPVYR 277
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 62 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 121 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 174
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 175 TCPGPGRVAKIGDFGMAQDI 194
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 271
Query: 323 SASVVK 328
V +
Sbjct: 272 PGPVYR 277
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 61 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGD 119
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 120 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 173
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 174 TCPGPGRVAKIGDFGMARDI 193
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 270
Query: 323 SASVVK 328
V +
Sbjct: 271 PGPVYR 276
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 61 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 119
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 120 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 173
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 174 TCPGPGRVAKIGDFGMARDI 193
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 270
Query: 323 SASVVK 328
V +
Sbjct: 271 PGPVYR 276
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 26 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE------- 78
K + + +K EA I + L HP+IV+L I+EE +++ +L GEL
Sbjct: 46 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKN 104
Query: 79 --DIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
++ YS QI +++ + S VHRD+ N+L+AS VKL DF
Sbjct: 105 SLKVLTLVLYS--------LQICKAMAYLESINCVHRDIAVRNILVASP---ECVKLGDF 153
Query: 137 GLAIEVQGEQ 146
GL+ ++ E
Sbjct: 154 GLSRYIEDED 163
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 19/127 (14%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S +D EA I K H NIVR + +++ +L+ GG+L + F E
Sbjct: 80 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL------KSFLRE 133
Query: 89 A-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
D H + I + N +HRD+ N LL G K+ D
Sbjct: 134 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 193
Query: 136 FGLAIEV 142
FG+A ++
Sbjct: 194 FGMARDI 200
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 277
Query: 323 SASVVK 328
V +
Sbjct: 278 PGPVYR 283
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 102 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 160
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 161 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 214
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 215 TCPGPGRVAKIGDFGMARDI 234
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 311
Query: 323 SASVVK 328
V +
Sbjct: 312 PGPVYR 317
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 26 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE------- 78
K + + +K EA I + L HP+IV+L I+EE +++ +L GEL
Sbjct: 50 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKN 108
Query: 79 --DIVAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADF 136
++ YS QI +++ + S VHRD+ N+L+AS VKL DF
Sbjct: 109 SLKVLTLVLYS--------LQICKAMAYLESINCVHRDIAVRNILVASP---ECVKLGDF 157
Query: 137 GLAIEVQGEQ 146
GL+ ++ E
Sbjct: 158 GLSRYIEDED 167
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 78 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 136
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 137 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 190
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 191 TCPGPGRVAKIGDFGMARDI 210
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 287
Query: 323 SASVVK 328
V +
Sbjct: 288 PGPVYR 293
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 76 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGD 134
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 135 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 188
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 189 TCPGPGRVAKIGDFGMARDI 208
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 285
Query: 323 SASVVK 328
V +
Sbjct: 286 PGPVYR 291
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 143
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 177
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 291 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 20/140 (14%)
Query: 16 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGE 75
L+ A K + + S +D EA I K H NIVR + +++ +L+ GG+
Sbjct: 79 LQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 137
Query: 76 LFEDIVAREFYSEA-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLL 122
L + F E D H + I + N +HRD+ N LL
Sbjct: 138 L------KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 191
Query: 123 ASKAKGAAVKLADFGLAIEV 142
G K+ DFG+A ++
Sbjct: 192 TCPGPGRVAKIGDFGMARDI 211
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 288
Query: 323 SASVVK 328
V +
Sbjct: 289 PGPVYR 294
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 19/127 (14%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S +D EA I K H NIVR + +++ +L+ GG+L + F E
Sbjct: 88 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL------KSFLRE 141
Query: 89 A-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
D H + I + N +HRD+ N LL G K+ D
Sbjct: 142 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 201
Query: 136 FGLAIEV 142
FG+A ++
Sbjct: 202 FGMARDI 208
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 285
Query: 323 SASVVK 328
V +
Sbjct: 286 PGPVYR 291
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 144
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 178
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 150
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 151 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 184
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 298 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 144
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 145 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 178
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 49 PNIVRLHDSIQE--ENYHYLVFDLVTGGELFEDIVAREFY---SEADASHCIQQILESVN 103
PNI+ L D +++ LVF+ V + ++ Y ++ D + +IL++++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALD 145
Query: 104 HCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+CHS G++HRD+KP N+++ + + ++L D+GLA
Sbjct: 146 YCHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLA 179
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 191 VTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
V+PEA + ++++L + R+TA EA++HP+
Sbjct: 293 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 109/313 (34%), Gaps = 96/313 (30%)
Query: 1 GAFSVVRRCV-QKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ--HPN----IVR 53
GAF V C+ KA G A KI+ K R + E ++ L PN V+
Sbjct: 25 GAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 54 LHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESVNHCHSNGV 110
+ + + + +VF+L+ G D + + H + QI +SVN HSN +
Sbjct: 82 MLEWFEHHGHICIVFELL--GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 111 VHRDLKPENLLLASKAKGAA----------------VKLADFG----------------- 137
H DLKPEN+L A +K+ DFG
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRH 199
Query: 138 -------LAIEVQGEQQAW-FGVILYILLVGYPPFWDED----------------QHRLY 173
LA+ W G IL +G+ F D +H +
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ 259
Query: 174 AQIKAGAYDYPSPEWDTVTPEAK------------------------NLINQMLTVNPSK 209
K + + +WD + + +LI +ML +P+K
Sbjct: 260 KTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319
Query: 210 RITASEALKHPWI 222
RIT EALKHP+
Sbjct: 320 RITLREALKHPFF 332
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
Y +PEV+ + +P D+W+ G IL +G+ F D
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 109/313 (34%), Gaps = 96/313 (30%)
Query: 1 GAFSVVRRCV-QKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQ--HPN----IVR 53
GAF V C+ KA G A KI+ K R + E ++ L PN V+
Sbjct: 25 GAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 54 LHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ---QILESVNHCHSNGV 110
+ + + + +VF+L+ G D + + H + QI +SVN HSN +
Sbjct: 82 MLEWFEHHGHICIVFELL--GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 111 VHRDLKPENLLLASKAKGAA----------------VKLADFG----------------- 137
H DLKPEN+L A +K+ DFG
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH 199
Query: 138 -------LAIEVQGEQQAW-FGVILYILLVGYPPFWDED----------------QHRLY 173
LA+ W G IL +G+ F D +H +
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ 259
Query: 174 AQIKAGAYDYPSPEWDTVTPEAK------------------------NLINQMLTVNPSK 209
K + + +WD + + +LI +ML +P+K
Sbjct: 260 KTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319
Query: 210 RITASEALKHPWI 222
RIT EALKHP+
Sbjct: 320 RITLREALKHPFF 332
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 258 FAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDED 302
T Y +PEV+ + +P D+W+ G IL +G+ F D
Sbjct: 194 LVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD 238
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 19/127 (14%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S +D EA I K H NIVR + +++ +L+ GG+L + F E
Sbjct: 100 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL------KSFLRE 153
Query: 89 A-------------DASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
D H + I + N +HRD+ N LL G K+ D
Sbjct: 154 TRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD 213
Query: 136 FGLAIEV 142
FG+A ++
Sbjct: 214 FGMARDI 220
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKHK 322
++ PE + + D W+ GV+L+ I +GY P+ + + + +G D PK+
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC 297
Query: 323 SASVVK 328
V +
Sbjct: 298 PGPVYR 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 73/297 (24%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 39 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 95
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ----------- 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 144 ------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAG-AYD 182
+ W FGV+L+ I +G P+ L+ +K G D
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 183 YPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVD 239
PS T E ++ PS+R T + ++ +R+ ++ QE +D
Sbjct: 273 KPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVE-----DLDRIVALTSNQEXLD 320
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + +V + + G L F D
Sbjct: 95 RDFLS---EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL------DTFLRTHD 145
Query: 91 ASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
I Q++ + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 146 GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN---LVCKVSDFGLSRVLE 202
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ A W FGV+++ +L G P+W+
Sbjct: 203 DDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
Query: 172 LYAQIKAGAYDYPSP 186
+ + ++ G Y P+P
Sbjct: 263 VISSVEEG-YRLPAP 276
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ GV+++ +L G P+W+ + + ++ G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + +V + + G L F D
Sbjct: 95 RDFLS---EASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL------DTFLRTHD 145
Query: 91 ASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
I Q++ + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 146 GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSN---LVCKVSDFGLSRVLE 202
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ A W FGV+++ +L G P+W+
Sbjct: 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD 262
Query: 172 LYAQIKAGAYDYPSP 186
+ + ++ G Y P+P
Sbjct: 263 VISSVEEG-YRLPAP 276
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ GV+++ +L G P+W+ + + ++ G
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG 270
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQK---LEREARICRKLQHPNIVRLHDS 57
G F V + K GL A I K+ +++D + E E +C+ HPNI+ L +
Sbjct: 36 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINLLGA 94
Query: 58 IQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI----------QQIL-------E 100
+ Y YL + G L D + + E D + I QQ+L
Sbjct: 95 CEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 153
Query: 101 SVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+++ +HRDL N+L+ + K+ADFGL+
Sbjct: 154 GMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS 189
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 90
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 147
Query: 136 FGLAIE 141
FGLA E
Sbjct: 148 FGLATE 153
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQK---LEREARICRKLQHPNIVRLHDS 57
G F V + K GL A I K+ +++D + E E +C+ HPNI+ L +
Sbjct: 26 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINLLGA 84
Query: 58 IQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI----------QQIL-------E 100
+ Y YL + G L D + + E D + I QQ+L
Sbjct: 85 CEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 143
Query: 101 SVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+++ +HRDL N+L+ + K+ADFGL+
Sbjct: 144 GMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS 179
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 73/297 (24%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 39 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 95
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ----------- 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 144 ------------------GEQQAW-FGVILY-ILLVGYPPFWDEDQHRLYAQIKAG-AYD 182
+ W FGV+L+ I +G P+ L+ +K G D
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 272
Query: 183 YPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVD 239
PS T E ++ PS+R T + ++ +R+ ++ QE +D
Sbjct: 273 KPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVE-----DLDRIVALTSNQEYLD 320
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 94
Query: 77 FEDIVAREFYSEADASHCI-QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + A E E I +Q +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 95 YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGD 151
Query: 136 FGLA 139
FGLA
Sbjct: 152 FGLA 155
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLKKE---PYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ + PY D++A G++LY L+ G P+
Sbjct: 170 LSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 31/227 (13%)
Query: 19 AAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELF 77
A K + L+AR DFQ REA + LQH +IV+ + + + +VF+ + G+L
Sbjct: 49 AVKALKDPTLAARKDFQ---REAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 78 EDIVA-------------REFYSEADAS---HCIQQILESVNHCHSNGVVHRDLKPENLL 121
+ + A R+ E S H QI + + S VHRDL N L
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCL 165
Query: 122 LASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVGYPPFWDEDQHRLYAQI--KAG 179
+ + VK+ DFG++ +V ++ V + +L P W + +Y + ++
Sbjct: 166 VGAN---LLVKIGDFGMSRDVYSTD--YYRVGGHTML---PIRWMPPESIMYRKFTTESD 217
Query: 180 AYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRE 226
+ + W+ T K Q+ + IT L+ P +C +E
Sbjct: 218 VWSFGVILWEIFT-YGKQPWFQLSNTEVIECITQGRVLERPRVCPKE 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 89 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 148 AARNLLLATR---DLVKIGDFGL 167
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 110
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 111 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 167
Query: 136 FGLAIE 141
FGLA E
Sbjct: 168 FGLATE 173
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 79 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 138 AARNLLLATR---DLVKIGDFGL 157
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 83 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 142 AARNLLLATR---DLVKIGDFGL 161
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 1 GAFSVVRRCVQKATGLEFAAK-IINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G F + + TG K +I + + R F K E ++ R L+HPN+++ +
Sbjct: 21 GCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK---EVKVMRCLEHPNVLKFIGVLY 77
Query: 60 EENYHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
++ + + + GG L I + + Y + + I + + HS ++HRDL
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSH 137
Query: 119 NLLLASKAKGAAVKLADFGLA 139
N L+ V +ADFGLA
Sbjct: 138 NCLVRENKN---VVVADFGLA 155
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 236 ETVDCLKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVIL 288
E + LKK + +++ V G P +++PE++ Y + VD+++ G++L
Sbjct: 166 EGLRSLKKPDRKKRYTV------VGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 29 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 88
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 89 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 147
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 148 AARNLLLATR---DLVKIGDFGL 167
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 79 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 138 AARNLLLATR---DLVKIGDFGL 157
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 19 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 78
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 79 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 137
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 138 AARNLLLATR---DLVKIGDFGL 157
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGLA ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLARVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 118
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 175
Query: 136 FGLAIE 141
FGLA E
Sbjct: 176 FGLATE 181
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 1 GAFSVVRRCVQKATG---LEFAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHD 56
G+F VVRR A + A K + LS + RE L H N++RL+
Sbjct: 23 GSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG 82
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESVNHCHSNGVVHRDL 115
+ +V +L G L + + + + S Q+ E + + S +HRDL
Sbjct: 83 VVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDL 141
Query: 116 KPENLLLASKAKGAAVKLADFGL 138
NLLLA++ VK+ DFGL
Sbjct: 142 AARNLLLATR---DLVKIGDFGL 161
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 62 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHD 112
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 113 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 169
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 230 VIKAVDEG-YRLPPP 243
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 79 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 129
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 130 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 186
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 187 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 246
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 247 VIKAVDEG-YRLPPP 260
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 62 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 112
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 113 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 169
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 170 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 229
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 230 VIKAVDEG-YRLPPP 243
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 248 RKLKVSTRQGFAGTPGYLSPEVLKKEP-YGKPVDIWACGVILYILLVGYPPFWD-EDQHR 305
R+ +V+ R AGTPG+ +PEVL K P +D+W+ GVI LL G PF+ D
Sbjct: 199 RRQQVAPR---AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255
Query: 306 LYAQI 310
AQI
Sbjct: 256 ALAQI 260
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 41 RICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGG------ELFEDIVAREFYSEADASHC 94
RI +LQ + D++ Y + D V E F DI+ + E
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEV--REY 122
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ + +++ H G+VHRD+KP N L + K A L DFGLA
Sbjct: 123 MLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYA--LVDFGLA 165
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 165 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI 222
D +L + I+ A + W+ V EA +L++++L +NP+ RITA EAL HP+
Sbjct: 301 MDSSTPKLTSDIQGHATNLEG--WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 57/266 (21%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 75 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLAIE--------------------VQG-----E 145
+HRD+KP N+L+ S+ + +KL DFG++ + +QG +
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 183
Query: 146 QQAW-FGVILYILLVGY----PPFWDEDQHRLYAQIKAGAY--DYPSPEWDT--VTPEAK 196
W G+ L + VG PP ED A + Y + P P+ + + E +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 197 NLINQMLTVNPSKRITASEALKHPWI 222
+ +N+ L NP++R + + H +I
Sbjct: 244 DFVNKCLIKNPAERADLKQLMVHAFI 269
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGY----P 296
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 297 PFWDEDQ 303
P ED
Sbjct: 206 PDAKEDS 212
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 112/315 (35%), Gaps = 96/315 (30%)
Query: 1 GAFSVVRRCV-QKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPN------IV 52
G F V +CV + G A KII N +K + E + K+ + V
Sbjct: 44 GTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINEKDPDNKNLCV 99
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGV 110
++ D + + F+L+ G F+ + + Y H Q+ ++V H N +
Sbjct: 100 QMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKL 158
Query: 111 VHRDLKPENLLLAS----------------KAKGAAVKLADFGLA--------------- 139
H DLKPEN+L + K AV++ DFG A
Sbjct: 159 THTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHSTIVSTRH 218
Query: 140 -------IEVQGEQ--QAW-FGVILYILLVGYPPFWDEDQH---------------RLYA 174
+E+ Q W G I++ VG+ F D R+
Sbjct: 219 YRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIR 278
Query: 175 QIKAGAYDYPSP-EWDT------------------VTPEAK------NLINQMLTVNPSK 209
+ + Y Y +WD +T EA+ +LI ML P+K
Sbjct: 279 KTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAK 338
Query: 210 RITASEALKHPWICQ 224
R+T EAL+HP+ +
Sbjct: 339 RLTLGEALQHPFFAR 353
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK 311
T Y +PEV+ + + +P D+W+ G I++ VG+ F D A ++
Sbjct: 214 VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMME 266
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 89 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 139
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 140 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 196
Query: 144 GEQQAWF 150
+ +A +
Sbjct: 197 DDPEAAY 203
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQAWF 150
+ +A +
Sbjct: 199 DDPEAAY 205
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 36 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL-DFLK 93
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 94 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 150
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 90
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 147
Query: 136 FGLA 139
FGLA
Sbjct: 148 FGLA 151
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 48 HPNIVRLHDSIQEENYH-----YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESV 102
HP+IV++ + ++ + H Y+V + V G L + +EA A + +IL ++
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPAL 195
Query: 103 NHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFG 137
++ HS G+V+ DLKPEN++L + +KL D G
Sbjct: 196 SYLHSIGLVYNDLKPENIMLTEE----QLKLIDLG 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 38 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL-DFLK 95
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 96 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 152
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L + +
Sbjct: 40 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG 98
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 99 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 154
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 92
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 93 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 149
Query: 136 FGLA 139
FGLA
Sbjct: 150 FGLA 153
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 168 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 23/143 (16%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH----------------YLVFDLVTGGELF 77
+K ERE + KL H NIV + +Y ++ + G L
Sbjct: 49 EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE 108
Query: 78 EDIVAR--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ I R E + A +QI + V++ HS +++RDLKP N+ L + VK+ D
Sbjct: 109 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGD 165
Query: 136 FGLAIEVQ--GEQQAWFGVILYI 156
FGL ++ G++ G + Y+
Sbjct: 166 FGLVTSLKNDGKRXRSKGTLRYM 188
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILL 292
GT Y+SPE + + YGK VD++A G+IL LL
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 95
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 152
Query: 136 FGLA 139
FGLA
Sbjct: 153 FGLA 156
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 74/195 (37%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+RL + + +V + + G L F + D
Sbjct: 91 RDFLG---EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL------DSFLRKHD 141
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
A + Q I + + G VHRDL N+L+ S K++DFGL ++
Sbjct: 142 AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLGRVLE 198
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++L+ ++ G P+W+
Sbjct: 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD 258
Query: 172 LYAQIKAGAYDYPSP 186
+ + G Y P P
Sbjct: 259 VIKAVDEG-YRLPPP 272
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ SPE + + D+W+ G++L+ ++ G P+W+ + + G
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 32 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 88
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 149 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 194
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 211 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 1 GAFSVVRRCVQKATG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
GAF V + + G + A KI+N + + ++ EA I + HP++VRL
Sbjct: 49 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMASMDHPHLVRLLG 107
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRD 114
LV L+ G L E + + S+ + C+Q I + + + +VHRD
Sbjct: 108 VCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ-IAKGMMYLEERRLVHRD 165
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
L N+L+ S VK+ DFGLA ++G+++ +
Sbjct: 166 LAARNVLVKSPNH---VKITDFGLARLLEGDEKEY 197
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 95
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 152
Query: 136 FGLA 139
FGLA
Sbjct: 153 FGLA 156
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 171 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 39 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 95
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE----------------FYSEADASHC 94
I+ L + ++ Y++ + + G L E + ARE S D C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 39 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 95
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 156 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 218 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 276
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 80 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 136
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 197 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 242
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 259 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 317
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 31 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 87
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 148 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 193
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 210 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 28 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 84
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 145 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 190
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 207 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 265
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQK---LEREARICRKLQHPNIVRLHDS 57
G F V + K GL A I K+ +++D + E E +C+ HPNI+ L +
Sbjct: 33 GNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV-LCKLGHHPNIINLLGA 91
Query: 58 IQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCI----------QQIL-------E 100
+ Y YL + G L D + + E D + I QQ+L
Sbjct: 92 CEHRGYLYLAIEYAPHGNLL-DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVAR 150
Query: 101 SVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+++ +HR+L N+L+ + K+ADFGL+
Sbjct: 151 GMDYLSQKQFIHRNLAARNILV---GENYVAKIADFGLS 186
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + EA+I +KL+H +V+L+ + EE Y+V + + G L + +
Sbjct: 38 IKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKD 96
Query: 83 REFYSE--ADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + + Q+ + + +HRDL+ N+L+ + G K+ADFGLA
Sbjct: 97 GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGN---GLICKIADFGLA 152
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 32/169 (18%)
Query: 1 GAFSVVRRCVQKATGLE---------FAAKIINTKKLSARDFQKLEREARICRKL-QHPN 50
GAF V + +A GL+ A K++ + + +D L E + + + +H N
Sbjct: 24 GAFGQV--VLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKN 80
Query: 51 IVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHC 94
I+ L + ++ Y++ + + G L E + AR E S D C
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
Q+ + + S +HRDL N+L+ + +K+ADFGLA ++
Sbjct: 141 AYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 186
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+L+ I +G P+ L+ +K G D+P +
Sbjct: 203 WMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSN 261
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 12/149 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ K + A K+I +S +F +EA+ KL HP +V+ + +
Sbjct: 19 GQFGVVKLGKWKGQ-YDVAVKMIKEGSMSEDEFF---QEAQTMMKLSHPKLVKFYGVCSK 74
Query: 61 ENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ---ILESVNHCHSNGVVHRDLKP 117
E Y+V + ++ G L + R + S ++ + E + S+ +HRDL
Sbjct: 75 EYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAA 132
Query: 118 ENLLLASKAKGAAVKLADFGLAIEVQGEQ 146
N L+ + VK++DFG+ V +Q
Sbjct: 133 RNCLV---DRDLCVKVSDFGMTRYVLDDQ 158
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 117
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 118 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 174
Query: 136 FGLA 139
FGLA
Sbjct: 175 FGLA 178
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L + +V G L
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL 118
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 175
Query: 136 FGLA 139
FGLA
Sbjct: 176 FGLA 179
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 12 KATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLV 71
K TG + IN + S L+ E + + HPNIV + +N ++V +
Sbjct: 49 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 72 TGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAK 127
G +D++ F +E ++ +Q +L+++++ H G VHR +K ++L++ K
Sbjct: 109 AYGSA-KDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 166
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 182 DYPS-PEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVAS 230
D PS P T +P + + Q L NP R +AS L H + Q +R AS
Sbjct: 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 345
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Query: 17 EFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGEL 76
+ A K++N + + Q + E + RK +H NI+ L +V G L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSL 90
Query: 77 FEDI-VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
+ + + + +Q + +++ H+ ++HRDLK N+ L + VK+ D
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGD 147
Query: 136 FGLA 139
FGLA
Sbjct: 148 FGLA 151
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 258 FAGTPGYLSPEVLK---KEPYGKPVDIWACGVILYILLVGYPPF 298
+G+ +++PEV++ K PY D++A G++LY L+ G P+
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 12 KATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLV 71
K TG + IN + S L+ E + + HPNIV + +N ++V +
Sbjct: 33 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 72 TGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAK 127
G +D++ F +E ++ +Q +L+++++ H G VHR +K ++L++ K
Sbjct: 93 AYGSA-KDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 150
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 182 DYPS-PEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVAS 230
D PS P T +P + + Q L NP R +AS L H + Q +R AS
Sbjct: 280 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRAS 329
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 110/260 (42%), Gaps = 51/260 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 36 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 93
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 94 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLAIE--------------------VQG-----E 145
+HRD+KP N+L+ S+ + +KL DFG++ + +QG +
Sbjct: 146 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQ 202
Query: 146 QQAW-FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT--VTPEAKNLINQM 202
W G+ L + VG P ++ + P P+ + + E ++ +N+
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC 262
Query: 203 LTVNPSKRITASEALKHPWI 222
L NP++R + + H +I
Sbjct: 263 LIKNPAERADLKQLMVHAFI 282
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 165 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 93 HCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
H QI E+V HS G++HRDLKP N+ VK+ DFGL + +++
Sbjct: 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEE 219
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 253 STRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGY 295
+T G GT Y+SPE + Y VDI++ G+IL+ LL +
Sbjct: 231 ATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSF 273
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDF--QKLEREARICRKLQHPNIVRLHDS 57
G F VV K +A K I +L R+ +K+ RE + KL+HP IVR ++
Sbjct: 17 GGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLEHPGIVRYFNA 72
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L + +
Sbjct: 213 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG 271
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 327
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L + +
Sbjct: 213 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG 271
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 327
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + + G L + +
Sbjct: 44 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKG 102
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 158
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L + +
Sbjct: 296 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKG 354
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 355 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 410
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH-YLVFDLVTGGELFEDIVAREFYSEADAS 92
Q EA + +L+H N+V+L I EE Y+V + + G L + + +R
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGG 288
Query: 93 HCIQQ----ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
C+ + + E++ + N VHRDL N+L+ ++ K++DFGL E Q
Sbjct: 289 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDT 345
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 1 GAFSVVRRCVQKATG----LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
GAF V + + G + A KI+N + + ++ EA I + HP++VRL
Sbjct: 26 GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD-EALIMASMDHPHLVRLLG 84
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESVNHCHSNGVVHRD 114
LV L+ G L E + + S+ + C+Q I + + + +VHRD
Sbjct: 85 VCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ-IAKGMMYLEERRLVHRD 142
Query: 115 LKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
L N+L+ S VK+ DFGLA ++G+++ +
Sbjct: 143 LAARNVLVKSPNH---VKITDFGLARLLEGDEKEY 174
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +K++H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + + G L + +
Sbjct: 44 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKG 102
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 103 ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 158
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L + +
Sbjct: 213 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKG 271
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 272 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 327
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 35 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 90
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 149
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V ++ Y VG +P W + +Y++
Sbjct: 150 NCLVNDQ---GVVKVSDFGLSRYVLDDE--------YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 199 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 233
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH-YLVFDLVTGGELFEDIVAREFYSEADAS 92
Q EA + +L+H N+V+L I EE Y+V + + G L + + +R
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGG 116
Query: 93 HCIQQ----ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ 146
C+ + + E++ + N VHRDL N+L+ ++ K++DFGL E Q
Sbjct: 117 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ 171
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILV---GENLVCKVADFGLA 161
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH-YLVFDLVTGGELFEDIVAREFYSEADAS 92
Q EA + +L+H N+V+L I EE Y+V + + G L + + +R
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGG 107
Query: 93 HCIQQ----ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQ 146
C+ + + E++ + N VHRDL N+L+ ++ K++DFGL E Q
Sbjct: 108 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQ 162
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 89/223 (39%), Gaps = 51/223 (22%)
Query: 5 VVRRCVQKATGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSIQEEN 62
V + ++ ++G + I T K + Q+++ EA I + H NI+RL I +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 63 YHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQ-------ILESVNHCHSNGVVHRDL 115
++ + + G L +F E D + Q I + + + VHRDL
Sbjct: 120 PMMIITEYMENGAL------DKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDL 173
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQGEQQA------------W-------------- 149
N+L+ S K++DFGL+ ++ + +A W
Sbjct: 174 AARNILVNSN---LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230
Query: 150 -----FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 186
FG++++ ++ G P+W+ H + I G + P+P
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLPTP 272
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ G++++ ++ G P+W+ H + I G
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 266
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 26 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 81
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 140
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V ++ Y VG +P W + +Y++
Sbjct: 141 NCLVNDQ---GVVKVSDFGLSRYVLDDE--------YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 190 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 224
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 20 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 75
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 134
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V ++ Y VG +P W + +Y++
Sbjct: 135 NCLVNDQ---GVVKVSDFGLSRYVLDDE--------YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 184 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 218
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 43/223 (19%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLER--EARICRKLQHPNIVRLHDSI 58
G F V K G A I T K+ + Q+ + EA I + HPN+V L +
Sbjct: 54 GEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVV 113
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHRDL 115
+V + + G L D R+ ++ ++ I + + G VHRDL
Sbjct: 114 TRGKPVMIVIEFMENGAL--DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDL 171
Query: 116 KPENLLLASKAKGAAVKLADFGLAIEVQGEQQA------------W-------------- 149
N+L+ S K++DFGL+ ++ + +A W
Sbjct: 172 AARNILVNSN---LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 150 -----FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSP 186
+G++++ ++ G P+WD + I+ G Y P+P
Sbjct: 229 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPAP 270
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE ++ + D+W+ G++++ ++ G P+WD + I+ G
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 185
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 186 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 242
Query: 132 KLADFGLAIEVQG 144
K+ADFGLA ++
Sbjct: 243 KIADFGLARDINN 255
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 271 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 329
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 34 QKLEREARICRKLQHPNIVRLHDSIQEENYH-YLVFDLVTGGELFEDIVAREFYSEADAS 92
Q EA + +L+H N+V+L I EE Y+V + + G L + + +R
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGG 101
Query: 93 HCIQQ----ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQA 148
C+ + + E++ + N VHRDL N+L+ ++ K++DFGL E Q
Sbjct: 102 DCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDT 158
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 67 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 126
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 127 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVM 183
Query: 132 KLADFGLAIEVQG 144
K+ADFGLA ++
Sbjct: 184 KIADFGLARDINN 196
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 212 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 270
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 19 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 74
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 133
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V ++ Y VG +P W + +Y++
Sbjct: 134 NCLVNDQ---GVVKVSDFGLSRYVLDDE--------YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 183 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 217
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE Y+V + ++ G L D +
Sbjct: 47 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLL-DFLK 104
Query: 83 REFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
E + QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 105 GEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 161
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 69 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 128
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 129 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 185
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 186 KIADFGLARDIN 197
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 214 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 272
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 15 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 70
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 129
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V ++ Y VG +P W + +Y++
Sbjct: 130 NCLVNDQ---GVVKVSDFGLSRYVLDDE--------YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 179 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 213
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 72 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 131
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 132 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 188
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 189 KIADFGLARDIN 200
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 217 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 275
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 37 EREARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
+RE I R L H +IV+ Q E LV + V G L D + R A
Sbjct: 59 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLAQLLLF 117
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
QQI E + + H+ +HR L N+LL + VK+ DFGLA V
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDND---RLVKIGDFGLAKAV 162
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 23/160 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 20 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 77
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 78 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAWF 150
+HRD+KP N+L+ S+ + +KL DFG++ ++ E F
Sbjct: 130 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANEF 166
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVG-YP 296
L F +L F GT Y+SPE L+ Y DIW+ G+ L + VG YP
Sbjct: 149 LCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Query: 37 EREARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
+RE I R L H +IV+ Q E LV + V G L D + R A
Sbjct: 58 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLAQLLLF 116
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
QQI E + + H+ +HR L N+LL + VK+ DFGLA V
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDND---RLVKIGDFGLAKAV 161
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 18/137 (13%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K + +AR + REA + LQH +IV+ + E + +VF+ + G+L +
Sbjct: 47 AVKTLKDASDNAR--KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNK 104
Query: 79 DIVAR-------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASK 125
+ A +++ H QQI + + S VHRDL N L+
Sbjct: 105 FLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV--- 161
Query: 126 AKGAAVKLADFGLAIEV 142
+ VK+ DFG++ +V
Sbjct: 162 GENLLVKIGDFGMSRDV 178
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSI 58
G F V R KA G + + I T K + Q+ E EA I + +HPNI+RL +
Sbjct: 25 GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV 84
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSN-------GVV 111
++ + + G L F D + Q++ + S V
Sbjct: 85 TNSMPVMILTEFMENGAL------DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 138
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ S K++DFGL+
Sbjct: 139 HRDLAARNILVNSN---LVCKVSDFGLS 163
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K + +S F + EA++ +KL+H +V+L+ + EE Y+V + ++ G L
Sbjct: 213 AIKTLKPGNMSPEAFLQ---EAQVMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLL- 267
Query: 79 DIVAREFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLAD 135
D + E + QI + + VHRDL+ N+L+ + K+AD
Sbjct: 268 DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVAD 324
Query: 136 FGLA 139
FGL
Sbjct: 325 FGLG 328
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 80
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L E + +E QI + + + + +
Sbjct: 81 GVCYSAGRRNLK-LIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 140 HRDLATRNILVENENR---VKIGDFGLT 164
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 79 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 136
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 137 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 189 MHRDVKPSNILVNSRGE---IKLCDFGVS 214
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 208 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 267
Query: 301 EDQHRL 306
D L
Sbjct: 268 PDAKEL 273
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 75 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVS 152
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 301 EDQHRL 306
D L
Sbjct: 206 PDAKEL 211
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
++ADFGLA ++
Sbjct: 197 RIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 75 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVS 152
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 301 EDQHRL 306
D L
Sbjct: 206 PDAKEL 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ D L E + + + +H NI+ L + ++ Y++ + + G L E + AR
Sbjct: 80 TEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++ +
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENXY 168
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 97/225 (43%), Gaps = 32/225 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 35 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 90
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 149
Query: 119 NLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVILYILLVG--YPPFWDEDQHRLYAQI 176
N L+ + VK++DFGL+ V +++ VG +P W + +Y++
Sbjct: 150 NCLVNDQ---GVVKVSDFGLSRYVLDDEET--------SSVGSKFPVRWSPPEVLMYSKF 198
Query: 177 --KAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 219
K+ + + W+ + L P +R T SE +H
Sbjct: 199 SSKSDIWAFGVLMWEIYS----------LGKMPYERFTNSETAEH 233
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 75 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVS 152
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 301 EDQHRL 306
D L
Sbjct: 206 PDAKEL 211
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 17 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 74
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 75 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFGVS 152
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 301 EDQHRL 306
D L
Sbjct: 206 PDAKEL 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 18/148 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSI 58
G F V R KA G + + I T K + Q+ E EA I + +HPNI+RL +
Sbjct: 27 GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVV 86
Query: 59 QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSN-------GVV 111
++ + + G L F D + Q++ + S V
Sbjct: 87 TNSMPVMILTEFMENGAL------DSFLRLNDGQFTVIQLVGMLRGIASGMRYLAEMSYV 140
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ S K++DFGL+
Sbjct: 141 HRDLAARNILVNSN---LVCKVSDFGLS 165
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 23 INTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVA 82
I T K + +EA++ +KL+H +V+L+ + EE +V + ++ G L + +
Sbjct: 37 IKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKG 95
Query: 83 R--EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
++ QI + + VHRDL+ N+L+ + K+ADFGLA
Sbjct: 96 ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLA 151
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 37 EREARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
++E I R L H +I++ Q E LV + V G L D + R A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLF 122
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
QQI E + + HS +HR+L N+LL + VK+ DFGLA V
Sbjct: 123 AQQICEGMAYLHSQHYIHRNLAARNVLLDND---RLVKIGDFGLAKAV 167
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+ L + + +V + + G L F + D
Sbjct: 68 RDFLG---EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL------DTFLKKND 118
Query: 91 ASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
+ Q++ + + G VHRDL N+L+ S K++DFGL+ ++
Sbjct: 119 GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSN---LVCKVSDFGLSRVLE 175
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++++ ++ G P+W+
Sbjct: 176 DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD 235
Query: 172 LYAQIKAGAYDYPSP 186
+ ++ G Y PSP
Sbjct: 236 VIKAVEEG-YRLPSP 249
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 182
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 182
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 29 SARDFQKLEREARICRKL-QHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAR---- 83
+ +D L E + + + +H NI+ L + ++ Y++ + G L E + AR
Sbjct: 80 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPG 139
Query: 84 ------------EFYSEADASHCIQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAV 131
E + D C Q+ + + S +HRDL N+L+ + +
Sbjct: 140 MEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVM 196
Query: 132 KLADFGLAIEVQ 143
K+ADFGLA ++
Sbjct: 197 KIADFGLARDIN 208
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
+++PE L Y D+W+ GV+++ I +G P+ L+ +K G D+P +
Sbjct: 225 WMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPAN 283
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 166
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 134
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 135 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 180
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 478
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++ +
Sbjct: 479 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYY 526
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + K +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 44 GNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 101
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V ++ A +QIL V+ G +
Sbjct: 102 SDGEISICMEHMDGGSL--DQVLKK------AGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 154 MHRDVKPSNILVNSRGE---IKLCDFGVS 179
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 29/66 (43%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y+SPE L+ Y DIW+ G+ L + VG P
Sbjct: 173 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232
Query: 301 EDQHRL 306
D L
Sbjct: 233 PDAKEL 238
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 479
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++ +
Sbjct: 480 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADENYY 527
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 126
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 127 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 172
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 117 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 162
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 66 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 123
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 164
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 98
EA + ++L +P IVR+ + E++ LV ++ G L + + + + + Q+
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 114
Query: 99 LESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ + + VHRDL N+LL ++ K++DFGL+ ++ ++
Sbjct: 115 SMGMKYLEESNFVHRDLAARNVLLVTQ---HYAKISDFGLSKALRADEN 160
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 121
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 162
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 121
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 162
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 115
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 156
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 115
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 156
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 67 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 124
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE 60
G F VV+ + + A K+I +S +F + EA++ L H +V+L+ +
Sbjct: 20 GQFGVVKYGKWRGQ-YDVAIKMIKEGSMSEDEFIE---EAKVMMNLSHEKLVQLYGVCTK 75
Query: 61 ENYHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ +++ + + G L + + F ++ C + + E++ + S +HRDL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAAR 134
Query: 119 NLLLASKAKGAAVKLADFGLA 139
N L+ + VK++DFGL+
Sbjct: 135 NCLVNDQ---GVVKVSDFGLS 152
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 68 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 125
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 166
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 60 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 117
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 158
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 63 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 120
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 161
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 59 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 116
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 157
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 115
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 156
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 80
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + A E QI + + + + +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 140 HRDLATRNILVENENR---VKIGDFGLT 164
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 115
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 156
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 1 GAFSVVRRCVQKATGL---EFAAKI-INTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G F VV + T + + AA + I T++L Q+ ++E ++ K QH N+V L
Sbjct: 36 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENLVELLG 91
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESVNHCHSNGVVHR 113
+ + LV+ + G L + + + Q +N H N +HR
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 151
Query: 114 DLKPENLLLASKAKGAAVKLADFGLA 139
D+K N+LL + K++DFGLA
Sbjct: 152 DIKSANILL---DEAFTAKISDFGLA 174
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHR 305
GT Y++PE L+ E K DI++ GV+L ++ G P D+HR
Sbjct: 191 GTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPAV---DEHR 232
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 37 EREARICRKLQHPNIVRLHDSIQEENYHYL--VFDLVTGGELFEDIVAREFYSEADASHC 94
++E I R L H +I++ ++ L V + V G L D + R A
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLF 139
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
QQI E + + H+ +HRDL N+LL + VK+ DFGLA V
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDND---RLVKIGDFGLAKAV 184
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 23/149 (15%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTK-KLSARDFQKLEREARICRKLQHPNIVRLHDSIQ 59
G VV + + +GL A K+I+ + K + R+ ++ RE ++ + P IV + +
Sbjct: 27 GNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN--QIIRELQVLHECNSPYIVGFYGAFY 84
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESVNHCHSNG---------V 110
+ + + + GG L D V +E A ++IL V+ G +
Sbjct: 85 SDGEISICMEHMDGGSL--DQVLKE------AKRIPEEILGKVSIAVLRGLAYLREKHQI 136
Query: 111 VHRDLKPENLLLASKAKGAAVKLADFGLA 139
+HRD+KP N+L+ S+ + +KL DFG++
Sbjct: 137 MHRDVKPSNILVNSRGE---IKLCDFGVS 162
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 32/78 (41%)
Query: 241 LKKFNARRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWD 300
L F +L S F GT Y++PE L+ Y DIW+ G+ L L VG P
Sbjct: 156 LCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
Query: 301 EDQHRLYAQIKAGAYDDE 318
D L A D E
Sbjct: 216 PDAKELEAIFGRPVVDGE 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 53 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 110
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HRDL+ N+L++ + K+ADFGLA
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVSDT---LSCKIADFGLA 151
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 1 GAFSVVRRCVQKATGL---EFAAKI-INTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G F VV + T + + AA + I T++L Q+ ++E ++ K QH N+V L
Sbjct: 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENLVELLG 97
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQQILESVNHCHSNGVVHR 113
+ + LV+ + G L + + + Q +N H N +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 114 DLKPENLLLASKAKGAAVKLADFGLA 139
D+K N+LL + K++DFGLA
Sbjct: 158 DIKSANILL---DEAFTAKISDFGLA 180
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHR 305
GT Y++PE L+ E K DI++ GV+L ++ G P D+HR
Sbjct: 197 GTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPAV---DEHR 238
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 37 EREARICRKLQHPNIVRLHDSI--QEENYHYLVFDLVTGGELFEDIVAREFYSEADASHC 94
++E I R L H +I++ Q E LV + V G L D + R A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLF 122
Query: 95 IQQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
QQI E + + H+ +HR+L N+LL + VK+ DFGLA V
Sbjct: 123 AQQICEGMAYLHAQHYIHRNLAARNVLLDND---RLVKIGDFGLAKAV 167
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 52 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 108
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 109 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 167
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 168 HRDLATRNILVENENR---VKIGDFGLT 192
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 1 GAFSVVRRCVQKATGL---EFAAKI-INTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G F VV + T + + AA + I T++L Q+ ++E ++ K QH N+V L
Sbjct: 42 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENLVELLG 97
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHR 113
+ + LV+ + G L + + + S Q +N H N +HR
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHR 157
Query: 114 DLKPENLLLASKAKGAAVKLADFGLA 139
D+K N+LL + K++DFGLA
Sbjct: 158 DIKSANILL---DEAFTAKISDFGLA 180
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHR 305
GT Y++PE L+ E K DI++ GV+L ++ G P D+HR
Sbjct: 197 GTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITGLPAV---DEHR 238
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 77
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 137 HRDLATRNILVENENR---VKIGDFGLT 161
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 39 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 95
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 155 HRDLATRNILVENENR---VKIGDFGLT 179
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 19 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 75
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 76 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 135 HRDLATRNILVENENR---VKIGDFGLT 159
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 77
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 137 HRDLATRNILVENENR---VKIGDFGLT 161
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 28 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 84
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 85 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 143
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 144 HRDLATRNILVENENR---VKIGDFGLT 168
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 21 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 77
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 78 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGV 152
HRDL N+L+ ++ + VK+ DFGL +V + + +F V
Sbjct: 137 HRDLATRNILVENENR---VKIGDFGLT-KVLPQDKEFFKV 173
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 39 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 95
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 96 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 155 HRDLATRNILVENENR---VKIGDFGLT 179
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 63/281 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARIC-RKLQHPNIVRLHDSIQ 59
GA+ VV + +G A K I +++++ ++L + I R + P V + ++
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF 120
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQ---------ILESVNHCHSN- 108
E ++ +L+ D +FY + D I + I++++ H HS
Sbjct: 121 REGDVWICMELM-------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 109 GVVHRDLKPENLLLASKAKGAAVKLADFGLA-----------------------IEVQGE 145
V+HRD+KP N+L+ + + VK+ DFG++ I +
Sbjct: 174 SVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELN 230
Query: 146 QQAW--------FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW--DTVTPEA 195
Q+ + G+ + L + P+ + + Q+K + PSP+ D + E
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQ-VVEEPSPQLPADKFSAEF 287
Query: 196 KNLINQMLTVNPSKRITASEALKHPWICQRER----VASIV 232
+ +Q L N +R T E ++HP+ E VAS V
Sbjct: 288 VDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFV 328
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%), Gaps = 63/281 (22%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLSARDFQKLEREARIC-RKLQHPNIVRLHDSIQ 59
GA+ VV + +G A K I +++++ ++L + I R + P V + ++
Sbjct: 18 GAYGVVEKMRHVPSGQIMAVKRIRAT-VNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF 76
Query: 60 EENYHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQ---------ILESVNHCHSN- 108
E ++ +L+ D +FY + D I + I++++ H HS
Sbjct: 77 REGDVWICMELM-------DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 109 GVVHRDLKPENLLLASKAKGAAVKLADFGLA-----------------------IEVQGE 145
V+HRD+KP N+L+ + + VK+ DFG++ I +
Sbjct: 130 SVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELN 186
Query: 146 QQAW--------FGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEW--DTVTPEA 195
Q+ + G+ + L + P+ + + Q+K + PSP+ D + E
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPY--DSWGTPFQQLKQ-VVEEPSPQLPADKFSAEF 243
Query: 196 KNLINQMLTVNPSKRITASEALKHPWICQRER----VASIV 232
+ +Q L N +R T E ++HP+ E VAS V
Sbjct: 244 VDFTSQCLKKNSKERPTYPELMQHPFFTLHESKGTDVASFV 284
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 20 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 76
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 77 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 136 HRDLATRNILVENENR---VKIGDFGLT 160
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 27 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 83
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 84 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 143 HRDLATRNILVENENR---VKIGDFGLT 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 25 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 81
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 82 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 140
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 141 HRDLATRNILVENENR---VKIGDFGLT 165
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 24 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 80
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 81 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 140 HRDLATRNILVENENR---VKIGDFGLT 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 26 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 82
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 83 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 141
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HRDL N+L+ ++ + VK+ DFGL
Sbjct: 142 HRDLATRNILVENENR---VKIGDFGLT 166
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 1 GAFSVVRRCVQKATGL---EFAAKI-INTKKLSARDFQKLEREARICRKLQHPNIVRLHD 56
G F VV + T + + AA + I T++L Q+ ++E ++ K QH N+V L
Sbjct: 33 GGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVXAKCQHENLVELLG 88
Query: 57 SIQEENYHYLVFDLVTGGELFEDIVAREF---YSEADASHCIQQILESVNHCHSNGVVHR 113
+ + LV+ G L + + + S Q +N H N +HR
Sbjct: 89 FSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHR 148
Query: 114 DLKPENLLLASKAKGAAVKLADFGLA 139
D+K N+LL + K++DFGLA
Sbjct: 149 DIKSANILL---DEAFTAKISDFGLA 171
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 260 GTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPFWDEDQHR 305
GT Y +PE L+ E K DI++ GV+L ++ G P D+HR
Sbjct: 188 GTTAYXAPEALRGEITPKS-DIYSFGVVLLEIITGLPAV---DEHR 229
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 3 FSVVRRCVQKATGLEF-AAKIINTKKLSAR------DFQKLEREARICRKLQH----PNI 51
+ V RR + + G+ F ++N ++++ + D +L E R + L PN+
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 52 VRLHDSIQEENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESVNHCHSN 108
QE ++ LV DL+ G ED++ R+F S + +Q+L V H
Sbjct: 72 YYFG---QEGLHNVLVIDLL--GPSLEDLLDLCGRKF-SVKTVAMAAKQMLARVQSIHEK 125
Query: 109 GVVHRDLKPENLLLA--SKAKGAAVKLADFGL 138
+V+RD+KP+N L+ + + + DFG+
Sbjct: 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 157
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 22/152 (14%)
Query: 3 FSVVRRCVQKATGLEF-AAKIINTKKLSAR------DFQKLEREARICRKLQH----PNI 51
+ V RR + + G+ F ++N ++++ + D +L E R + L PN+
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 52 VRLHDSIQEENYHYLVFDLVTGGELFEDIV---AREFYSEADASHCIQQILESVNHCHSN 108
QE ++ LV DL+ G ED++ R+F S + +Q+L V H
Sbjct: 71 YYFG---QEGLHNVLVIDLL--GPSLEDLLDLCGRKF-SVKTVAMAAKQMLARVQSIHEK 124
Query: 109 GVVHRDLKPENLLLA--SKAKGAAVKLADFGL 138
+V+RD+KP+N L+ + + + DFG+
Sbjct: 125 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 156
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 22/166 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLEREARICRKL-QHPNIVRLH 55
GAF V G E A + K L A + + L E +I L QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 56 DSIQEENYHYLVFDLVTGGELFEDI--------------VAREFYSEADASHCIQQILES 101
+ ++ + G+L + +A S D H Q+ +
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQG 176
Query: 102 VNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ S +HRD+ N+LL + G K+ DFGLA ++ +
Sbjct: 177 MAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMNDSN 219
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKA--KGAAVKLADFGLAIE 141
Q+L + + HS +++RD+KPEN L+ + K + + DFGLA E
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKE 151
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 14 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--NYHYLVFDLV 71
TG + A K + + L++E I R L H NIV+ E+ N L+ + +
Sbjct: 49 TGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 72 TGGELFEDIVAREFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKG 128
G L E + + ++ + ++ QI + +++ S VHRDL N+L+ S+ +
Sbjct: 108 PSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ- 164
Query: 129 AAVKLADFGLAIEVQGEQQ 147
VK+ DFGL ++ +++
Sbjct: 165 --VKIGDFGLTKAIETDKE 181
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 22/166 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLEREARICRKL-QHPNIVRLH 55
GAF V G E A + K L A + + L E +I L QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 56 DSIQEENYHYLVFDLVTGGELFEDI--------------VAREFYSEADASHCIQQILES 101
+ ++ + G+L + +A S D H Q+ +
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 102 VNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ S +HRD+ N+LL + G K+ DFGLA ++ +
Sbjct: 177 MAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMNDSN 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 14 TGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE--NYHYLVFDLV 71
TG + A K + + L++E I R L H NIV+ E+ N L+ + +
Sbjct: 37 TGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 72 TGGELFEDIVAREFYSEADASHCIQ---QILESVNHCHSNGVVHRDLKPENLLLASKAKG 128
G L E + + ++ + ++ QI + +++ S VHRDL N+L+ S+ +
Sbjct: 96 PSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQ- 152
Query: 129 AAVKLADFGLAIEVQGEQQ 147
VK+ DFGL ++ +++
Sbjct: 153 --VKIGDFGLTKAIETDKE 169
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + ++LQH +VRL+ + +E Y++ + + G L D + + + +
Sbjct: 54 EANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLV-DFLKTPSGIKLTINKLLDMA 111
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
QI E + +HR+L+ N+L++ + K+ADFGLA
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRAANILVSDT---LSCKIADFGLA 152
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRL 54
G F V C G A ++ K+L RDFQ RE +I + L IV+
Sbjct: 34 GNFGSVELCRYDPLGDNTGA-LVAVKQLQHSGPDQQRDFQ---REIQILKALHSDFIVKY 89
Query: 55 HDSIQEENYHYL--VFDLVTGGELFEDIVAREFYSEADASHCI---QQILESVNHCHSNG 109
L V + + G L D + R + DAS + QI + + + S
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
VHRDL N+L+ S+A VK+ADFGLA
Sbjct: 148 CVHRDLAARNILVESEAH---VKIADFGLA 174
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRL 54
G F V C G A ++ K+L RDFQ RE +I + L IV+
Sbjct: 22 GNFGSVELCRYDPLGDNTGA-LVAVKQLQHSGPDQQRDFQ---REIQILKALHSDFIVKY 77
Query: 55 HDSIQEENYHYL--VFDLVTGGELFEDIVAREFYSEADASHCI---QQILESVNHCHSNG 109
L V + + G L D + R + DAS + QI + + + S
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
VHRDL N+L+ S+A VK+ADFGLA
Sbjct: 136 CVHRDLAARNILVESEAH---VKIADFGLA 162
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K + SAR Q +REA + LQH +IVR E +VF+ + G+L
Sbjct: 75 AVKALKEASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 132
Query: 79 DIVAREFYSE--------ADASHCIQQILESVNHCHSNGV-------VHRDLKPENLLLA 123
+ + ++ A + Q+L + + V VHRDL N L+
Sbjct: 133 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV- 191
Query: 124 SKAKGAAVKLADFGLAIEV 142
+G VK+ DFG++ ++
Sbjct: 192 --GQGLVVKIGDFGMSRDI 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 78/205 (38%), Gaps = 51/205 (24%)
Query: 23 INTKKLSARDFQKLE--REARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDI 80
I T K D Q+ + EA I + HPNI+ L + + ++ + + G L
Sbjct: 62 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL---- 117
Query: 81 VAREFYSEADASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKL 133
F + D + Q++ + + VHRDL N+L+ S K+
Sbjct: 118 --DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSN---LVCKV 172
Query: 134 ADFGLAIEVQGEQQA------------W-------------------FGVILY-ILLVGY 161
+DFG++ ++ + +A W +G++++ ++ G
Sbjct: 173 SDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 232
Query: 162 PPFWDEDQHRLYAQIKAGAYDYPSP 186
P+WD + I+ G Y P P
Sbjct: 233 RPYWDMSNQDVIKAIEEG-YRLPPP 256
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ G++++ ++ G P+WD + I+ G
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 250
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRL 54
G F V C G A ++ K+L RDFQ RE +I + L IV+
Sbjct: 21 GNFGSVELCRYDPLGDNTGA-LVAVKQLQHSGPDQQRDFQ---REIQILKALHSDFIVKY 76
Query: 55 HDSIQEENYHYL--VFDLVTGGELFEDIVAREFYSEADASHCI---QQILESVNHCHSNG 109
L V + + G L D + R + DAS + QI + + + S
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
VHRDL N+L+ S+A VK+ADFGLA
Sbjct: 135 CVHRDLAARNILVESEAH---VKIADFGLA 161
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 1 GAFSVVRRCVQKATG-LEFAAKII-NTKKLSARDFQKLEREARICRKLQHPN------IV 52
G F V C+ A G + A KII N K R+ +LE + +K++ + V
Sbjct: 30 GTFGKVVECLDHARGKSQVALKIIRNVGKY--REAARLE--INVLKKIKEKDKENKFLCV 85
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGV 110
+ D + + F+L+ G FE + F Y H Q+ ++ H N +
Sbjct: 86 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL 144
Query: 111 VHRDLKPENLLLAS----------------KAKGAAVKLADFGLA 139
H DLKPEN+L + K ++++ADFG A
Sbjct: 145 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T Y PEV+ + + +P D+W+ G IL+ G+ F
Sbjct: 200 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 197 NLINQMLTVNPSKRITASEALKHPWI 222
+L+ +ML +P++RIT +EAL HP+
Sbjct: 312 DLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 16/148 (10%)
Query: 1 GAFSVVRRC----VQKATGLEFAAKII-NTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G F V C +Q TG A K + ++ + RDF ERE I + LQH NIV+
Sbjct: 22 GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF---EREIEILKSLQHDNIVKYK 78
Query: 56 D---SIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILESVNHCHSNGVV 111
S N L+ + + G L + + +E QI + + + + +
Sbjct: 79 GVCYSAGRRNLK-LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 137
Query: 112 HRDLKPENLLLASKAKGAAVKLADFGLA 139
HR+L N+L+ ++ + VK+ DFGL
Sbjct: 138 HRNLATRNILVENENR---VKIGDFGLT 162
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 1 GAFSVVRRCVQKATG-LEFAAKII-NTKKLSARDFQKLEREARICRKLQHPN------IV 52
G F V C+ A G + A KII N K R+ +LE + +K++ + V
Sbjct: 39 GTFGKVVECLDHARGKSQVALKIIRNVGKY--REAARLE--INVLKKIKEKDKENKFLCV 94
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGV 110
+ D + + F+L+ G FE + F Y H Q+ ++ H N +
Sbjct: 95 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL 153
Query: 111 VHRDLKPENLLLAS----------------KAKGAAVKLADFGLA 139
H DLKPEN+L + K ++++ADFG A
Sbjct: 154 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 198
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T Y PEV+ + + +P D+W+ G IL+ G+ F
Sbjct: 209 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 248
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 197 NLINQMLTVNPSKRITASEALKHPWI 222
+L+ +ML +P++RIT +EAL HP+
Sbjct: 321 DLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K + SAR Q +REA + LQH +IVR E +VF+ + G+L
Sbjct: 46 AVKALKEASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 103
Query: 79 DIV-----AREFYSEADASH---CIQQILESVNHCHSNGV-------VHRDLKPENLLLA 123
+ A+ D + + Q+L + + V VHRDL N L+
Sbjct: 104 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV- 162
Query: 124 SKAKGAAVKLADFGLAIEV 142
+G VK+ DFG++ ++
Sbjct: 163 --GQGLVVKIGDFGMSRDI 179
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 1 GAFSVVRRCVQKATG-LEFAAKII-NTKKLSARDFQKLEREARICRKLQHPN------IV 52
G F V C+ A G + A KII N K R+ +LE + +K++ + V
Sbjct: 62 GTFGKVVECLDHARGKSQVALKIIRNVGKY--REAARLE--INVLKKIKEKDKENKFLCV 117
Query: 53 RLHDSIQEENYHYLVFDLVTGGELFEDIVAREF--YSEADASHCIQQILESVNHCHSNGV 110
+ D + + F+L+ G FE + F Y H Q+ ++ H N +
Sbjct: 118 LMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQL 176
Query: 111 VHRDLKPENLLLAS----------------KAKGAAVKLADFGLA 139
H DLKPEN+L + K ++++ADFG A
Sbjct: 177 THTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 221
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 259 AGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPPF 298
T Y PEV+ + + +P D+W+ G IL+ G+ F
Sbjct: 232 VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 271
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 197 NLINQMLTVNPSKRITASEALKHPWI 222
+L+ +ML +P++RIT +EAL HP+
Sbjct: 344 DLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 20/139 (14%)
Query: 19 AAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFE 78
A K + SAR Q +REA + LQH +IVR E +VF+ + G+L
Sbjct: 52 AVKALKEASESAR--QDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNR 109
Query: 79 DIV-----AREFYSEADASH---CIQQILESVNHCHSNGV-------VHRDLKPENLLLA 123
+ A+ D + + Q+L + + V VHRDL N L+
Sbjct: 110 FLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV- 168
Query: 124 SKAKGAAVKLADFGLAIEV 142
+G VK+ DFG++ ++
Sbjct: 169 --GQGLVVKIGDFGMSRDI 185
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 155 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 188
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS------ARDFQKLEREARICRKLQHPNIVRL 54
G F V C G A ++ K+L RDFQ RE +I + L IV+
Sbjct: 18 GNFGSVELCRYDPLGDNTGA-LVAVKQLQHSGPDQQRDFQ---REIQILKALHSDFIVKY 73
Query: 55 HDSIQEENYH--YLVFDLVTGGELFEDIVAREFYSEADASHCI---QQILESVNHCHSNG 109
LV + + G L D + R + DAS + QI + + + S
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCL-RDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 110 VVHRDLKPENLLLASKAKGAAVKLADFGLA 139
VHRDL N+L+ S+A VK+ADFGLA
Sbjct: 132 CVHRDLAARNILVESEAH---VKIADFGLA 158
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+ L + + ++ + + G L F + D
Sbjct: 60 RDFLS---EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKND 110
Query: 91 ASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
+ Q++ + + VHRDL N+L+ S K++DFG++ ++
Sbjct: 111 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---LVCKVSDFGMSRVLE 167
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++++ ++ G P+WD
Sbjct: 168 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 227
Query: 172 LYAQIKAGAYDYPSP 186
+ I+ G Y P P
Sbjct: 228 VIKAIEEG-YRLPPP 241
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ G++++ ++ G P+WD + I+ G
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 81
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 142 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 175
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 52/195 (26%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPNI+ L + + ++ + + G L F + D
Sbjct: 54 RDFLS---EASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL------DAFLRKND 104
Query: 91 ASHCIQQIL-------ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQ 143
+ Q++ + + VHRDL N+L+ S K++DFG++ ++
Sbjct: 105 GRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSN---LVCKVSDFGMSRVLE 161
Query: 144 GEQQA------------W-------------------FGVILY-ILLVGYPPFWDEDQHR 171
+ +A W +G++++ ++ G P+WD
Sbjct: 162 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 221
Query: 172 LYAQIKAGAYDYPSP 186
+ I+ G Y P P
Sbjct: 222 VIKAIEEG-YRLPPP 235
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/51 (21%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAG 313
+ +PE + + D+W+ G++++ ++ G P+WD + I+ G
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 87
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 148 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 181
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 29 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 87
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 148 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 181
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 257
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 27 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 85
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 86 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 145
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 146 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 179
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 255
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 88
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 149 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 182
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 30 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 88
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 149 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 182
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 258
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 36 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 94
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L + + S IQ +I + + +
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 155 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 188
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 264
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 21 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 79
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 80 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 139
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 140 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 173
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 249
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 58 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 116
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 117 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 176
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 177 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 210
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 286
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLA--SKAKGAAVKLADFGLAIE 141
Q++ + + H+ +++RD+KPEN L+ + A+ + DFGLA E
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKE 154
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 28/139 (20%)
Query: 26 KKLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVARE 84
K+ ++ D Q +REA + + +PNIV+L L+F+ + G+L E + +
Sbjct: 86 KEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMS 145
Query: 85 FYSEADASH-----------------------CI-QQILESVNHCHSNGVVHRDLKPENL 120
++ SH CI +Q+ + + VHRDL N
Sbjct: 146 PHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNC 205
Query: 121 LLASKAKGAAVKLADFGLA 139
L+ + VK+ADFGL+
Sbjct: 206 LV---GENMVVKIADFGLS 221
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 26 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 84
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L + + S IQ +I + + +
Sbjct: 85 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 144
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N ++ A+ VK+ DFG+ ++
Sbjct: 145 NANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDI 178
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 24/166 (14%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLEREARICRKL-QHPNIVRLH 55
GAF V G E A + K L A + + L E +I L QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 56 DSIQEENYHYLVFDLVTGGELFEDIVAR----------------EFYSEADASHCIQQIL 99
+ ++ + G+L + + E S D H Q+
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVA 176
Query: 100 ESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE 145
+ + S +HRD+ N+LL + G K+ DFGLA ++ +
Sbjct: 177 QGMAFLASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMND 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 33/176 (18%)
Query: 1 GAFSVVRRCV-----QKATGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRL 54
GAF V + ++ A K++ K S+ + L E ++ +L H NIV L
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER-EALMSELKMMTQLGSHENIVNL 114
Query: 55 HDSIQEENYHYLVFDLVTGGELFEDIVA-REFYSEADASHCIQQILE------------- 100
+ YL+F+ G+L + + RE +SE + + Q+ LE
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 101 ---------SVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
+ VHRDL N+L+ G VK+ DFGLA ++ +
Sbjct: 175 LCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSN 227
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 19/116 (16%)
Query: 31 RDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEAD 90
RDF EA I + HPN++ L + + ++ + + G L F + D
Sbjct: 79 RDFLS---EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL------DSFLRQND 129
Query: 91 ASHCIQQ-------ILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+ Q I + + VHRDL N+L+ S K++DFGL+
Sbjct: 130 GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSN---LVCKVSDFGLS 182
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 9/38 (23%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWD 300
+ +PE ++ + D+W+ G++++ ++ G P+WD
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLEREARICRKL-QHPNIVRLH 55
GAF V G E A + K L A + + L E +I L QH NIV L
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 56 DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS-----------HCIQQILESVNH 104
+ ++ + G+L + + R+ ++ D H Q+ + +
Sbjct: 117 GACTHGGPVLVITEYCCYGDLL-NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAF 175
Query: 105 CHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE 145
S +HRD+ N+LL + G K+ DFGLA ++ +
Sbjct: 176 LASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMND 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 20/163 (12%)
Query: 1 GAFSVVRRCVQKATGLEFAAKIINTKKLS----ARDFQKLEREARICRKL-QHPNIVRLH 55
GAF V G E A + K L A + + L E +I L QH NIV L
Sbjct: 49 GAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 108
Query: 56 DSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADAS-----------HCIQQILESVNH 104
+ ++ + G+L + + R+ ++ D H Q+ + +
Sbjct: 109 GACTHGGPVLVITEYCCYGDLL-NFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAF 167
Query: 105 CHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQ 147
S +HRD+ N+LL + G K+ DFGLA ++ +
Sbjct: 168 LASKNCIHRDVAARNVLLTN---GHVAKIGDFGLARDIMNDSN 207
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGA--AVKLADFGLAIE 141
Q++ + + HS +++RD+KPEN L+ + + DFGLA E
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKE 159
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 80/216 (37%), Gaps = 71/216 (32%)
Query: 95 IQQILESVNHCHSN-GVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAWFGVI 153
I+Q+L+ +++ HS ++H D+KPEN+L+ A V+ +A E Q+A
Sbjct: 146 IRQVLQGLDYLHSKCKIIHTDIKPENILMC--VDDAYVRR----MAAEATEWQKA----- 194
Query: 154 LYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNPSK-RIT 212
G PP PS + P A L+N + N K R+
Sbjct: 195 ------GAPP--------------------PSGSAVSTAPAADLLVNPLDPRNADKIRVK 228
Query: 213 ASEALKHPWICQRERVASIVHRQETVDCLKKFNARRKLKVSTRQGFAGTPGYLSPEVLKK 272
++ W VH+ T D + TRQ Y S EVL
Sbjct: 229 IADLGNACW----------VHKHFTED------------IQTRQ-------YRSIEVLIG 259
Query: 273 EPYGKPVDIWACGVILYILLVG---YPPFWDEDQHR 305
Y P DIW+ + + L G + P ED R
Sbjct: 260 AGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSR 295
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 197 NLINQMLTVNPSKRITASEALKHPWI 222
+ + ML + P KR +A E L+HPW+
Sbjct: 362 DFLIPMLEMVPEKRASAGECLRHPWL 387
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 73/243 (30%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S + + L E + +++ HP++++L+ + ++ L+ + G L R F E
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 89 A------------------------------DASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ D QI + + + +VHRDL
Sbjct: 120 SRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAAR 179
Query: 119 NLLLASKAKGAAVKLADFGLAIEV----------QG-------------------EQQAW 149
N+L+ A+G +K++DFGL+ +V QG + W
Sbjct: 180 NILV---AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 150 -FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
FGV+L+ I+ +G P+ RL+ +K G + P D + E L+ Q P
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEP 293
Query: 208 SKR 210
KR
Sbjct: 294 DKR 296
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 73/243 (30%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S + + L E + +++ HP++++L+ + ++ L+ + G L R F E
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 89 A------------------------------DASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ D QI + + + +VHRDL
Sbjct: 120 SRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR 179
Query: 119 NLLLASKAKGAAVKLADFGLAIEV----------QG-------------------EQQAW 149
N+L+ A+G +K++DFGL+ +V QG + W
Sbjct: 180 NILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 150 -FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
FGV+L+ I+ +G P+ RL+ +K G + P D + E L+ Q P
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEP 293
Query: 208 SKR 210
KR
Sbjct: 294 DKR 296
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 1 GAFSVVRRCVQKAT-----GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 55
G+F +V V K A K +N + S R+ + EA + ++ ++VRL
Sbjct: 23 GSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMKEFNCHHVVRLL 81
Query: 56 DSIQEENYHYLVFDLVTGGELFE-------DIVAREFYSEADASHCIQ---QILESVNHC 105
+ + ++ +L+T G+L ++ + S IQ +I + + +
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 106 HSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
++N VHRDL N + A+ VK+ DFG+ ++
Sbjct: 142 NANKFVHRDLAARNCXV---AEDFTVKIGDFGMTRDI 175
Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 264 YLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDDEPKH 321
++SPE LK + D+W+ GV+L+ I + P+ ++ + G D+P +
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDN 251
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 92/243 (37%), Gaps = 73/243 (30%)
Query: 29 SARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSE 88
S + + L E + +++ HP++++L+ + ++ L+ + G L R F E
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL------RGFLRE 119
Query: 89 A------------------------------DASHCIQQILESVNHCHSNGVVHRDLKPE 118
+ D QI + + + +VHRDL
Sbjct: 120 SRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR 179
Query: 119 NLLLASKAKGAAVKLADFGLAIEV----------QG-------------------EQQAW 149
N+L+ A+G +K++DFGL+ +V QG + W
Sbjct: 180 NILV---AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVW 236
Query: 150 -FGVILY-ILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKNLINQMLTVNP 207
FGV+L+ I+ +G P+ RL+ +K G + P D + E L+ Q P
Sbjct: 237 SFGVLLWEIVTLGGNPYPGIPPERLFNLLKTG-HRMERP--DNCSEEMYRLMLQCWKQEP 293
Query: 208 SKR 210
KR
Sbjct: 294 DKR 296
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + + +P++ RL I + L+ L+ G L + + RE + + +
Sbjct: 68 EAYVMASVDNPHVCRLL-GICLTSTVQLIMQLMPFGXLLDYV--REHKDNIGSQYLLNWC 124
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
QI + +N+ +VHRDL N+L+ + VK+ DFGLA + E++ +
Sbjct: 125 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEY 175
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 108 NGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
+GV+HRD+KP N+LL + + +KL DFG++
Sbjct: 144 HGVIHRDVKPSNILLDERGQ---IKLCDFGIS 172
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 131
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 132 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 172
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 118 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 173
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 174 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 233
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 234 NTFDITVYLLQGRRLLQPEY 253
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 39 EARICRKLQHPNIVRLHDSIQEENYHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-- 96
EA + + +P++ RL I + L+ L+ G L + + RE + + +
Sbjct: 64 EAYVMASVDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNWC 120
Query: 97 -QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEQQAW 149
QI E +N+ +VHRDL N+L+ + VK+ DFGLA + E++ +
Sbjct: 121 VQIAEGMNYLEDRRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEY 171
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 264 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 158
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 159 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 199
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 145 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 200
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 201 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 260
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 261 NTFDITVYLLQGRRLLQPEY 280
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 157
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 158 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 198
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 144 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 199
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 200 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 259
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 260 NTFDITVYLLQGRRLLQPEY 279
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Query: 38 REARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA-DASHCI 95
RE + R L HPN++ L + E +++ + G+L + I + + D
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFG 130
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 142
Q+ + + VHRDL N +L + VK+ADFGLA ++
Sbjct: 131 LQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDI 174
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKDPDXVRKGDARL 203
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 264 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 11 QKATGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEENYHYLVFDL 70
+ T L+ A K + S R+ ++ EA + HPN++RL E + + +
Sbjct: 58 EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117
Query: 71 VTGGEL-FEDIVAREFYS--EADASHC-IQQILE-------SVNHCHSNGVVHRDLKPEN 119
V + + D+ YS E H +Q +L+ + + + +HRDL N
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 120 LLLASKAKGAAVKLADFGLAIEV 142
+L V +ADFGL+ ++
Sbjct: 178 CMLRDD---MTVCVADFGLSKKI 197
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 139
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 180
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 126 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 181
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 242 NTFDITVYLLQGRRLLQPEY 261
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV--------QGEQQ- 147
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +G+ +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARL 255
Query: 148 --------------------AW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 315
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 316 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 136
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 137 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 177
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 123 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 178
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 179 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 238
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 239 NTFDITVYLLQGRRLLQPEY 258
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEV--------QGEQQ- 147
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +G+ +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARL 257
Query: 148 --------------------AW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 317
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 318 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 273 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARL 262
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 322
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 323 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 137
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 138 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 178
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 124 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 179
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 180 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 239
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 240 NTFDITVYLLQGRRLLQPEY 259
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 134
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 135 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 175
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 121 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 176
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 237 NTFDITVYLLQGRRLLQPEY 256
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 138
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 179
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVD--CLKKFNA 246
+T P K+LI L V + AS+ H + R + + D +
Sbjct: 125 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 247 RRKLKVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDEDQHR 305
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D +
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD 244
Query: 306 LYAQIKAGAYDDEPKH 321
+ + G +P++
Sbjct: 245 ITVYLLQGRRLLQPEY 260
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 324
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 325 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 63/162 (38%), Gaps = 52/162 (32%)
Query: 97 QILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGE----------- 145
Q+ + + S +HRDL N+LL+ K VK+ DFGLA ++ +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARL 203
Query: 146 ------------------QQAW-FGVILY-ILLVGYPPFW-----DEDQHRLYAQIKAGA 180
W FGV+L+ I +G P+ +E RL + A
Sbjct: 204 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 263
Query: 181 YDYPSPEWDTVTPEAKNLINQMLTV---NPSKRITASEALKH 219
DY +PE + ML PS+R T SE ++H
Sbjct: 264 PDYTTPE----------MYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 138
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 139 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 179
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 125 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 180
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 181 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 240
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 241 NTFDITVYLLQGRRLLQPEY 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 39 EARICRKLQHPNIVRLHD-SIQEENYHYLVFDLVTGGELFEDIVAREFYSEA--DASHCI 95
E I + HPN++ L ++ E +V + G+L + + E ++ D
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFG 139
Query: 96 QQILESVNHCHSNGVVHRDLKPENLLLASKAKGAAVKLADFGLA 139
Q+ + + + S VHRDL N +L K VK+ADFGLA
Sbjct: 140 LQVAKGMKYLASKKFVHRDLAARNCMLDEK---FTVKVADFGLA 180
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 189 DTVTPEAKNLINQMLTVNPSKRITASEALKHPWICQRERVASIVHRQETVDCLKKFNARR 248
+T P K+LI L V + AS+ H + R ++ + TV + F R
Sbjct: 126 ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN---CMLDEKFTVK-VADFGLAR 181
Query: 249 KL------KVSTRQGFAGTPGYLSPEVLKKEPYGKPVDIWACGVILYILLV-GYPPFWDE 301
+ V + G +++ E L+ + + D+W+ GV+L+ L+ G PP+ D
Sbjct: 182 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 241
Query: 302 DQHRLYAQIKAGAYDDEPKH 321
+ + + G +P++
Sbjct: 242 NTFDITVYLLQGRRLLQPEY 261
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,115,670
Number of Sequences: 62578
Number of extensions: 424419
Number of successful extensions: 4339
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 290
Number of HSP's that attempted gapping in prelim test: 1070
Number of HSP's gapped (non-prelim): 2542
length of query: 328
length of database: 14,973,337
effective HSP length: 99
effective length of query: 229
effective length of database: 8,778,115
effective search space: 2010188335
effective search space used: 2010188335
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)