BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2134
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|242021379|ref|XP_002431122.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
gi|212516371|gb|EEB18384.1| Poly U-binding-splicing factor half pint, putative [Pediculus
humanus corporis]
Length = 571
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/93 (54%), Positives = 63/93 (67%), Gaps = 15/93 (16%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E Q + YG VE+V+IYNEKQSD++ S++IVKIFV FS+ EAE ARD
Sbjct: 494 EIQDECSKYGVVERVIIYNEKQSDNDDSDIIVKIFVEFSRTSEAESARD----------- 542
Query: 72 YARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
ALNGR+F GR+V+ LYDQ LFDH+DFSG
Sbjct: 543 ----ALNGRYFGGRLVKCSLYDQVLFDHSDFSG 571
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 67/98 (68%), Gaps = 16/98 (16%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQSD-DEASEVIVKIFVSFSKMQEAEYARDALNGRF 66
+ E Q + +G VE+V+IYNEKQS+ D+AS+V+VKIFV F++
Sbjct: 509 TLQEEIQEECSKFGTVERVIIYNEKQSEEDDASDVVVKIFVEFTET-------------- 554
Query: 67 FAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EAE ARDALNGR+F GRMV+A LYDQ+LFDH+DFSG
Sbjct: 555 -PEAEKARDALNGRYFGGRMVQASLYDQTLFDHSDFSG 591
>gi|307195017|gb|EFN77085.1| Poly(U)-binding-splicing factor half pint [Harpegnathos saltator]
Length = 561
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 483 EIQDECSKFGVVERVIIYNERQSEDDENAEVIVKIFVEFSQM---------------SEA 527
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 528 ERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG 561
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 66/94 (70%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IY E+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 432 EIQDECSKFGVVERVIIYKERQSEDDENAEVIVKIFVEFSQM---------------SEA 476
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD+NDFSG
Sbjct: 477 ERARDSLNGRYFGGRLVKGELYDQALFDNNDFSG 510
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 514 EIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEFSQM---------------SEA 558
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 559 ERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG 592
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 514 EIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEFSQM---------------SEA 558
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 559 ERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG 592
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 514 EIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEFSQM---------------SEA 558
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 559 ERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG 592
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/94 (55%), Positives = 67/94 (71%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE +EVIVKIFV FS+M +EA
Sbjct: 514 EIQDECSKFGVVERVIIYNERQSEDDEDAEVIVKIFVEFSQM---------------SEA 558
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 559 ERARDSLNGRYFGGRLVKGELYDQALFDNSDFSG 592
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G VE+V+IYNE+QS DDE E+IVKIFV FS+M EA
Sbjct: 527 EIQDECSKFGVVERVIIYNERQSEDDEDPEIIVKIFVEFSQM---------------TEA 571
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E ARD+LNGR+F GR+V+ ELYDQ+L+D+ND+SG
Sbjct: 572 ERARDSLNGRYFGGRLVKGELYDQALYDNNDYSG 605
>gi|328704296|ref|XP_001948399.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 572
Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSD--DEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E Q + +G V++++IY EKQSD DE S+ IVKIFV F++M +E
Sbjct: 493 EIQDECCKFGVVKRIIIYKEKQSDCVDEDSDTIVKIFVEFTQM---------------SE 537
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
AE ARD++NGRFF GR+V+AELYDQ+LFDH+DFSG
Sbjct: 538 AEQARDSINGRFFGGRLVKAELYDQALFDHSDFSG 572
>gi|427776743|gb|JAA53823.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Rhipicephalus pulchellus]
Length = 579
Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DE +G V++V+IY E+QS+DE +E++VKIFV FS+ QEA ARDAL
Sbjct: 500 ESEVTDECGRFGTVKRVIIYQERQSEDENAEIVVKIFVEFSQAQEAASARDAL------- 552
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
NGRFF GR+V++ELYDQ+L++ ND SG
Sbjct: 553 --------NGRFFGGRLVKSELYDQTLYEANDLSG 579
>gi|346468399|gb|AEO34044.1| hypothetical protein [Amblyomma maculatum]
Length = 577
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DE +G V++V+IY E+QS+DE ++++VKIFV FS+ QE+ ARDAL
Sbjct: 498 ESEVTDECGRFGTVKRVIIYQERQSEDENADIVVKIFVEFSQAQESASARDAL------- 550
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
NGRFF GR+V+AELYDQ+L++ ND SG
Sbjct: 551 --------NGRFFGGRIVKAELYDQTLYEANDLSG 577
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G V +V+IY E+QS DDE +EVIVKIFV F++M EAE ARD+L
Sbjct: 531 EIQDECSKFGVVVRVIIYKERQSEDDENAEVIVKIFVEFAEMNEAERARDSL-------- 582
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
NGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 583 -------NGRYFGGRLVKGELYDQALFDNSDFSG 609
>gi|189234753|ref|XP_974490.2| PREDICTED: similar to STE20-like kinase (yeast) [Tribolium
castaneum]
Length = 1819
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%), Gaps = 16/97 (16%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQSD-DEASEVIVKIFVSFSKMQEAEYARDALNGRF 66
+ E Q + +G VE+V+IYNEKQS+ D+AS+V+VKIFV F++
Sbjct: 466 TLQEEIQEECSKFGTVERVIIYNEKQSEEDDASDVVVKIFVEFTET-------------- 511
Query: 67 FAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
EAE ARDALNGR+F GRMV+A LYDQ+LFDH S
Sbjct: 512 -PEAEKARDALNGRYFGGRMVQASLYDQTLFDHTKMS 547
>gi|322785180|gb|EFZ11893.1| hypothetical protein SINV_08068 [Solenopsis invicta]
Length = 545
Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/94 (52%), Positives = 64/94 (68%), Gaps = 16/94 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E Q + +G V +V+IY E+QS DDE +EVIVKIFV F++M EAE ARD+L
Sbjct: 467 EIQDECSKFGVVVRVIIYKERQSEDDENAEVIVKIFVEFAEMNEAERARDSL-------- 518
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
NGR+F GR+V+ ELYDQ+LFD++DFSG
Sbjct: 519 -------NGRYFGGRLVKGELYDQALFDNSDFSG 545
>gi|241315296|ref|XP_002408027.1| RNA-binding protein, putative [Ixodes scapularis]
gi|215497243|gb|EEC06737.1| RNA-binding protein, putative [Ixodes scapularis]
Length = 509
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/95 (50%), Positives = 64/95 (67%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DE +G V++V+IY E+QS++E +E+IVKIFV FSK QE+ ARDAL
Sbjct: 430 ESEVTDECGRFGMVKRVIIYQERQSEEENAEIIVKIFVEFSKAQESAGARDAL------- 482
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
NGRFF GR+V+AELYDQ+L++ ND SG
Sbjct: 483 --------NGRFFGGRLVKAELYDQTLYEANDLSG 509
>gi|321479211|gb|EFX90167.1| hypothetical protein DAPPUDRAFT_300177 [Daphnia pulex]
Length = 612
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G VE+V+IY EKQSDD+ +E+IVKIFV F+ AE ARD+LN G
Sbjct: 543 FGNVERVIIYKEKQSDDDDAEIIVKIFVEFTVGTGAETARDSLN---------------G 587
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFFAGRMVR ++YDQ+L++ ND SG
Sbjct: 588 RFFAGRMVRCDIYDQALYECNDLSG 612
>gi|328696967|ref|XP_001951881.2| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Acyrthosiphon pisum]
Length = 603
Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASE--VIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E Q + +G VE+V+IY EKQSD + IVKIFV F++M +E
Sbjct: 524 EIQDECSKFGVVERVIIYKEKQSDSVDDDSDTIVKIFVEFTQM---------------SE 568
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
AE ARD+LNGRFF GR+V+AELYDQ+LFDH+DFSG
Sbjct: 569 AEQARDSLNGRFFGGRLVKAELYDQALFDHSDFSG 603
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 531 EIQEECTKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSSS---------------A 575
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++ALNGRFF GR V AELYDQSLFDH D SG
Sbjct: 576 EAVRGKEALNGRFFGGRRVHAELYDQSLFDHGDLSG 611
>gi|312375119|gb|EFR22549.1| hypothetical protein AND_14557 [Anopheles darlingi]
Length = 295
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 20/90 (22%)
Query: 20 YGQVEKVVIYNEKQS-----DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
YG V++V+IY E+QS DD+ +++IVKIFV FS+ EA+ AR
Sbjct: 221 YGDVKRVIIYKERQSEGNYADDDFTDMIVKIFVEFSE---------------ATEADKAR 265
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
DALNGR+F GR+V+AE YDQ+L+DH D SG
Sbjct: 266 DALNGRYFGGRLVKAESYDQALYDHGDLSG 295
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 20/102 (19%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQSD-----DEASEVIVKIFVSFSKMQEAEYARDAL 62
+ +E Q + YG VE+V+IY E+QS+ D+ ++VIVKIFV FS+ AL
Sbjct: 586 TLQDEIQDECGKYGIVERVIIYKERQSEGDYAEDDNTDVIVKIFVEFSQ---------AL 636
Query: 63 NGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA+ AR+AL+GR+F GR+V+AE YDQ+LFDH D SG
Sbjct: 637 ------EADKAREALHGRYFGGRLVKAESYDQALFDHGDLSG 672
>gi|195427509|ref|XP_002061819.1| GK17204 [Drosophila willistoni]
gi|194157904|gb|EDW72805.1| GK17204 [Drosophila willistoni]
Length = 631
Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/96 (47%), Positives = 58/96 (60%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 551 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 595
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA +DAL+GRFF GR V AELYDQS+FD D SG
Sbjct: 596 EAIRGKDALHGRFFGGRRVIAELYDQSIFDQGDLSG 631
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 20/98 (20%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSD-----DEASEVIVKIFVSFSKMQEAEYARDALNGRF 66
E Q + YG V++V+IY E+QS+ D+ +++IVKIFV FS+
Sbjct: 561 EIQDECSKYGAVDRVIIYKERQSEGNFAEDDNTDMIVKIFVEFSQA-------------- 606
Query: 67 FAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA+ AR++LNGR+F GR+V+AE YDQ+LFDH D SG
Sbjct: 607 -TEADRARESLNGRYFGGRLVKAESYDQALFDHGDLSG 643
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 20/101 (19%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSD-----DEASEVIVKIFVSFSKMQEAEYARDALN 63
+ +E Q + YG VE+V+IY E+QS+ D+ ++VIVKIFV FS+
Sbjct: 576 LQDEIQEECGKYGLVERVIIYKERQSEGDYAEDDNTDVIVKIFVEFSQT----------- 624
Query: 64 GRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
E++ AR+AL+GR+F GR+V+AE YDQ+LFDH D SG
Sbjct: 625 ----TESDKAREALHGRYFGGRLVKAESYDQALFDHGDLSG 661
>gi|195167652|ref|XP_002024647.1| GL22585 [Drosophila persimilis]
gi|198467049|ref|XP_001354234.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
gi|194108052|gb|EDW30095.1| GL22585 [Drosophila persimilis]
gi|198149485|gb|EAL31287.2| GA11385 [Drosophila pseudoobscura pseudoobscura]
Length = 653
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 573 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 617
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA+ ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 618 EAQRGKEALHGRFFGGRRVVAELYDQGVFDQGDLSG 653
>gi|390345175|ref|XP_785572.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Strongylocentrotus purpuratus]
Length = 574
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +VVIY E+Q ++E +EVIVKIFV FS EA E A D+LN
Sbjct: 505 FGTVNRVVIYQERQGEEEDAEVIVKIFVEFSDPAEA---------------EQAADSLNS 549
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GRMVR E+YDQ FD +D SG
Sbjct: 550 RWFGGRMVRGEIYDQERFDSSDLSG 574
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 58/100 (58%), Gaps = 18/100 (18%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNG 64
+ E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS
Sbjct: 559 TLQEEIQEECSKFGIVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSA------------- 605
Query: 65 RFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA +DAL+GRFF GR V AELYDQSLFD D SG
Sbjct: 606 --GVEAMRGKDALHGRFFGGRRVVAELYDQSLFDQGDLSG 643
>gi|194864858|ref|XP_001971142.1| GG14596 [Drosophila erecta]
gi|190652925|gb|EDV50168.1| GG14596 [Drosophila erecta]
Length = 731
Score = 81.3 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 651 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 695
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 696 EAVRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 731
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 18/100 (18%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNG 64
+ E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS
Sbjct: 561 TLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSA------------- 607
Query: 65 RFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA +DAL+GRFF GR V AELYDQ+LFD D SG
Sbjct: 608 --GVEAVRGKDALHGRFFGGRRVVAELYDQALFDQGDLSG 645
>gi|390345173|ref|XP_003726279.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Strongylocentrotus purpuratus]
Length = 601
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +VVIY E+Q ++E +EVIVKIFV FS EA E A D+LN
Sbjct: 532 FGTVNRVVIYQERQGEEEDAEVIVKIFVEFSDPAEA---------------EQAADSLNS 576
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GRMVR E+YDQ FD +D SG
Sbjct: 577 RWFGGRMVRGEIYDQERFDSSDLSG 601
>gi|195135155|ref|XP_002012000.1| GI16722 [Drosophila mojavensis]
gi|193918264|gb|EDW17131.1| GI16722 [Drosophila mojavensis]
Length = 616
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS
Sbjct: 536 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------V 580
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA +DAL+GRFF GR V AELYDQ+LFD D SG
Sbjct: 581 EAVRGKDALHGRFFGGRRVVAELYDQALFDQGDLSG 616
>gi|24655233|ref|NP_728610.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|24655237|ref|NP_728611.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|24655242|ref|NP_728612.1| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|281365434|ref|NP_001163315.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|281365436|ref|NP_001163316.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|281365438|ref|NP_001163317.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|281365440|ref|NP_001163318.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|281365442|ref|NP_001163319.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|281365444|ref|NP_001163320.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
gi|7292089|gb|AAF47502.1| poly U binding factor 68kD, isoform C [Drosophila melanogaster]
gi|10727221|gb|AAG22221.1| poly U binding factor 68kD, isoform B [Drosophila melanogaster]
gi|16768670|gb|AAL28554.1| HL02140p [Drosophila melanogaster]
gi|23092776|gb|AAG22222.2| poly U binding factor 68kD, isoform D [Drosophila melanogaster]
gi|27820105|gb|AAO25077.1| GH01086p [Drosophila melanogaster]
gi|220953270|gb|ACL89178.1| pUf68-PB [synthetic construct]
gi|272454997|gb|ACZ94587.1| poly U binding factor 68kD, isoform E [Drosophila melanogaster]
gi|272454998|gb|ACZ94588.1| poly U binding factor 68kD, isoform F [Drosophila melanogaster]
gi|272454999|gb|ACZ94589.1| poly U binding factor 68kD, isoform G [Drosophila melanogaster]
gi|272455000|gb|ACZ94590.1| poly U binding factor 68kD, isoform H [Drosophila melanogaster]
gi|272455001|gb|ACZ94591.1| poly U binding factor 68kD, isoform I [Drosophila melanogaster]
gi|272455002|gb|ACZ94592.1| poly U binding factor 68kD, isoform J [Drosophila melanogaster]
Length = 545
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 465 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 509
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 510 EAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 545
>gi|195336594|ref|XP_002034920.1| GM14211 [Drosophila sechellia]
gi|194128013|gb|EDW50056.1| GM14211 [Drosophila sechellia]
Length = 616
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 536 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 580
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 581 EAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 616
>gi|194747299|ref|XP_001956090.1| GF25032 [Drosophila ananassae]
gi|190623372|gb|EDV38896.1| GF25032 [Drosophila ananassae]
Length = 643
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 59/100 (59%), Gaps = 18/100 (18%)
Query: 8 VIYNEKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNG 64
+ E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS
Sbjct: 559 TLQEEIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSA------------- 605
Query: 65 RFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+EA+ ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 606 --GSEAQRGKEALHGRFFGGRRVVAELYDQGIFDQGDLSG 643
>gi|24655228|ref|NP_525123.2| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
gi|41688713|sp|Q8T6B9.2|PUF68_DROME RecName: Full=Poly(U)-binding-splicing factor half pint;
Short=Protein half pint; AltName: Full=68 kDa
poly(U)-binding-splicing factor; AltName: Full=PUF60
homolog
gi|7292088|gb|AAF47501.1| poly U binding factor 68kD, isoform A [Drosophila melanogaster]
Length = 637
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 557 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 601
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 602 EAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 637
>gi|6118522|gb|AAF04132.1|AF190745_1 poly-U binding splicing factor [Drosophila melanogaster]
Length = 637
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 557 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 601
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 602 EAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 637
>gi|19224321|gb|AAL86452.1|AF479079_1 half pint [Drosophila melanogaster]
Length = 637
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 58/96 (60%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEA---SEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+++EA +E+IVKIFV FS A
Sbjct: 557 EIQEECSKFGTVSRVIIFNEKQTENEADDEAEIIVKIFVEFSAG---------------A 601
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 602 EAMRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 637
>gi|195490418|ref|XP_002093131.1| GE20955 [Drosophila yakuba]
gi|194179232|gb|EDW92843.1| GE20955 [Drosophila yakuba]
Length = 637
Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 18/96 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E Q + +G V +V+I+NEKQ+ DD+ +E+IVKIFV FS A
Sbjct: 557 EIQEECSKFGTVSRVIIFNEKQTENEDDDEAEIIVKIFVEFSAG---------------A 601
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA ++AL+GRFF GR V AELYDQ +FD D SG
Sbjct: 602 EAVRGKEALDGRFFGGRRVVAELYDQGIFDQGDLSG 637
>gi|291231691|ref|XP_002735797.1| PREDICTED: poly-U binding splicing factor 60KDa-like [Saccoglossus
kowalevskii]
Length = 528
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +EVI+KIFV FS EA E A +LNG
Sbjct: 459 FGNVSRVIIYQEKQGEEEDAEVIIKIFVEFSLPSEA---------------ETAIASLNG 503
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR+V+ E YDQ+ FD D SG
Sbjct: 504 RWFGGRLVKGETYDQAKFDAGDLSG 528
>gi|301773444|ref|XP_002922145.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Ailuropoda melanoleuca]
Length = 577
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 508 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 552
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 553 RWFAGRKVVAEVYDQERFDNSDLSA 577
>gi|444722723|gb|ELW63400.1| Poly(U)-binding-splicing factor PUF60 [Tupaia chinensis]
Length = 577
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 508 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNG 552
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 553 RWFAGRKVVAEVYDQERFDNSDLSA 577
>gi|126323028|ref|XP_001370705.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Monodelphis
domestica]
Length = 637
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 568 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 612
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 613 RWFAGRKVVAEVYDQERFDNSDLSA 637
>gi|354491098|ref|XP_003507693.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Cricetulus
griseus]
Length = 582
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 513 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 557
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 558 RWFAGRKVVAEVYDQERFDNSDLSA 582
>gi|355698276|gb|EHH28824.1| 60 kDa poly(U)-binding-splicing factor [Macaca mulatta]
Length = 568
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 499 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 543
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 544 RWFAGRKVVAEVYDQERFDNSDLSA 568
>gi|410987958|ref|XP_004000259.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Felis catus]
Length = 502
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 433 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 477
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 478 RWFAGRKVVAEVYDQERFDNSDLSA 502
>gi|187607191|ref|NP_001120082.1| poly-U binding splicing factor 60KDa [Xenopus (Silurana)
tropicalis]
gi|165971204|gb|AAI58522.1| LOC100145091 protein [Xenopus (Silurana) tropicalis]
Length = 507
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E + A ALNG
Sbjct: 438 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MSSETQKAIQALNG 482
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 483 RWFAGRKVVAEVYDQERFDNSDLSA 507
>gi|197100546|ref|NP_001127017.1| poly(U)-binding-splicing factor PUF60 [Pongo abelii]
gi|75040908|sp|Q5R469.1|PUF60_PONAB RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|55733539|emb|CAH93447.1| hypothetical protein [Pongo abelii]
Length = 558
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 489 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 533
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 534 RWFAGRKVVAEVYDQERFDNSDLSA 558
>gi|355780002|gb|EHH64478.1| 60 kDa poly(U)-binding-splicing factor [Macaca fascicularis]
Length = 521
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 452 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 496
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 497 RWFAGRKVVAEVYDQERFDNSDLSA 521
>gi|332831342|ref|XP_528257.3| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
troglodytes]
Length = 559
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 490 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 534
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 535 RWFAGRKVVAEVYDQERFDNSDLSA 559
>gi|297300233|ref|XP_001087975.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Macaca
mulatta]
Length = 559
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 490 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 534
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 535 RWFAGRKVVAEVYDQERFDNSDLSA 559
>gi|402794155|ref|NP_001258027.1| poly(U)-binding-splicing factor PUF60 isoform f [Homo sapiens]
gi|119602601|gb|EAW82195.1| fuse-binding protein-interacting repressor, isoform CRA_l [Homo
sapiens]
Length = 558
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 489 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 533
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 534 RWFAGRKVVAEVYDQERFDNSDLSA 558
>gi|395860112|ref|XP_003802359.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Otolemur garnettii]
Length = 558
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 489 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 533
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 534 RWFAGRKVVAEVYDQERFDNSDLSA 558
>gi|359321052|ref|XP_848710.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Canis
lupus familiaris]
Length = 560
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 491 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 535
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 536 RWFAGRKVVAEVYDQERFDNSDLSA 560
>gi|380810662|gb|AFE77206.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
gi|383416607|gb|AFH31517.1| poly(U)-binding-splicing factor PUF60 isoform a [Macaca mulatta]
Length = 560
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 491 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 535
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 536 RWFAGRKVVAEVYDQERFDNSDLSA 560
>gi|17978512|ref|NP_510965.1| poly(U)-binding-splicing factor PUF60 isoform a [Homo sapiens]
gi|397497388|ref|XP_003819493.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
paniscus]
gi|402879352|ref|XP_003903307.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Papio
anubis]
gi|441648299|ref|XP_004090873.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|74761960|sp|Q9UHX1.1|PUF60_HUMAN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=FUSE-binding protein-interacting repressor;
Short=FBP-interacting repressor; AltName:
Full=Ro-binding protein 1; Short=RoBP1; AltName:
Full=Siah-binding protein 1; Short=Siah-BP1
gi|6684440|gb|AAF23589.1|AF114818_1 Ro ribonucleoprotein-binding protein 1 [Homo sapiens]
gi|48146403|emb|CAG33424.1| SIAHBP1 [Homo sapiens]
gi|119602593|gb|EAW82187.1| fuse-binding protein-interacting repressor, isoform CRA_d [Homo
sapiens]
gi|158258178|dbj|BAF85062.1| unnamed protein product [Homo sapiens]
gi|410220384|gb|JAA07411.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303418|gb|JAA30309.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 559
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 490 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 534
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 535 RWFAGRKVVAEVYDQERFDNSDLSA 559
>gi|390475872|ref|XP_002759200.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Callithrix jacchus]
Length = 563
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 494 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 538
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 539 RWFAGRKVVAEVYDQERFDNSDLSA 563
>gi|281341440|gb|EFB17024.1| hypothetical protein PANDA_011097 [Ailuropoda melanoleuca]
Length = 512
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 443 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 487
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 488 RWFAGRKVVAEVYDQERFDNSDLSA 512
>gi|395512680|ref|XP_003760563.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Sarcophilus
harrisii]
Length = 553
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 484 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 528
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 529 RWFAGRKVVAEVYDQERFDNSDLSA 553
>gi|410042304|ref|XP_003951412.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 530
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 461 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 505
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 506 RWFAGRKVVAEVYDQERFDNSDLSA 530
>gi|6176532|gb|AAF05605.1|AF190744_1 poly-U binding splicing factor PUF60 [Homo sapiens]
Length = 556
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 487 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 531
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 532 RWFAGRKVVAEVYDQERFDNSDLSA 556
>gi|417402731|gb|JAA48201.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 558
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 489 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 533
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 534 RWFAGRKVVAEVYDQERFDNSDLSA 558
>gi|402794180|ref|NP_001258028.1| poly(U)-binding-splicing factor PUF60 isoform g [Homo sapiens]
gi|426360971|ref|XP_004047701.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Gorilla
gorilla gorilla]
gi|441648312|ref|XP_003280819.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1
[Nomascus leucogenys]
Length = 530
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 461 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 505
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 506 RWFAGRKVVAEVYDQERFDNSDLSA 530
>gi|410042300|ref|XP_003951410.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 516
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 447 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 491
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 492 RWFAGRKVVAEVYDQERFDNSDLSA 516
>gi|332831344|ref|XP_003312009.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Pan
troglodytes]
Length = 542
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 473 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 517
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 518 RWFAGRKVVAEVYDQERFDNSDLSA 542
>gi|297300235|ref|XP_001087851.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 5 [Macaca
mulatta]
Length = 542
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 473 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 517
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 518 RWFAGRKVVAEVYDQERFDNSDLSA 542
>gi|402794118|ref|NP_001258025.1| poly(U)-binding-splicing factor PUF60 isoform d [Homo sapiens]
gi|119602600|gb|EAW82194.1| fuse-binding protein-interacting repressor, isoform CRA_k [Homo
sapiens]
Length = 541
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 472 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 516
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 517 RWFAGRKVVAEVYDQERFDNSDLSA 541
>gi|380810660|gb|AFE77205.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
gi|383416605|gb|AFH31516.1| poly(U)-binding-splicing factor PUF60 isoform b [Macaca mulatta]
Length = 543
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 474 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 518
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 519 RWFAGRKVVAEVYDQERFDNSDLSA 543
>gi|17298690|ref|NP_055096.2| poly(U)-binding-splicing factor PUF60 isoform b [Homo sapiens]
gi|397497390|ref|XP_003819494.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Pan
paniscus]
gi|402879354|ref|XP_003903308.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Papio
anubis]
gi|441648302|ref|XP_004090874.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|17152040|gb|AAF27522.2|AF217197_1 FBP-interacting repressor [Homo sapiens]
gi|14250810|gb|AAH08875.1| Poly-U binding splicing factor 60KDa [Homo sapiens]
gi|119602594|gb|EAW82188.1| fuse-binding protein-interacting repressor, isoform CRA_e [Homo
sapiens]
gi|410220382|gb|JAA07410.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
gi|410303416|gb|JAA30308.1| poly-U binding splicing factor 60KDa [Pan troglodytes]
Length = 542
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 473 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 517
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 518 RWFAGRKVVAEVYDQERFDNSDLSA 542
>gi|1809248|gb|AAB41656.1| siah binding protein 1 [Homo sapiens]
Length = 541
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 472 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 516
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 517 RWFAGRKVVAEVYDQERFDNSDLSA 541
>gi|410042302|ref|XP_003951411.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 513
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 444 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 488
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 489 RWFAGRKVVAEVYDQERFDNSDLSA 513
>gi|403302944|ref|XP_003942108.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 509
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 440 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 484
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 485 RWFAGRKVVAEVYDQERFDNSDLSA 509
>gi|260828249|ref|XP_002609076.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
gi|229294430|gb|EEN65086.1| hypothetical protein BRAFLDRAFT_60256 [Branchiostoma floridae]
Length = 495
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 54/95 (56%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DE YGQV +V+IY E+Q ++E ++VIVKIFV FS+ E
Sbjct: 416 EGEVTDECGKYGQVNRVIIYQERQGEEENADVIVKIFVEFSESFE--------------- 460
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
AE ALNGR+F GR V AE YDQ FD D SG
Sbjct: 461 AERGVQALNGRWFGGRKVSAESYDQLKFDSQDLSG 495
>gi|209862867|ref|NP_001129505.1| poly(U)-binding-splicing factor PUF60 isoform c [Homo sapiens]
gi|109087696|ref|XP_001087604.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 3 [Macaca
mulatta]
gi|441648305|ref|XP_004090875.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Nomascus
leucogenys]
gi|15030041|gb|AAH11265.1| PUF60 protein [Homo sapiens]
gi|15080471|gb|AAH11979.1| PUF60 protein [Homo sapiens]
gi|119602595|gb|EAW82189.1| fuse-binding protein-interacting repressor, isoform CRA_f [Homo
sapiens]
Length = 516
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 447 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 491
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 492 RWFAGRKVVAEVYDQERFDNSDLSA 516
>gi|417402525|gb|JAA48108.1| Putative polypyrimidine tract-binding protein puf60 rrm superfamily
[Desmodus rotundus]
Length = 541
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 472 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 516
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 517 RWFAGRKVVAEVYDQERFDNSDLSA 541
>gi|395860114|ref|XP_003802360.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Otolemur garnettii]
Length = 542
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 473 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 517
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 518 RWFAGRKVVAEVYDQERFDNSDLSA 542
>gi|326918217|ref|XP_003205387.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Meleagris
gallopavo]
Length = 516
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 447 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 491
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 492 RWFAGRKVVAEVYDQERFDNSDLSA 516
>gi|327290985|ref|XP_003230202.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Anolis
carolinensis]
Length = 541
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 472 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 516
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 517 RWFAGRKVVAEVYDQERFDNSDLSA 541
>gi|73974710|ref|XP_857040.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 6 [Canis
lupus familiaris]
Length = 543
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 474 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 518
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 519 RWFAGRKVVAEVYDQERFDNSDLSA 543
>gi|338728499|ref|XP_003365686.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 2
[Equus caballus]
Length = 516
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 447 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 491
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 492 RWFAGRKVVAEVYDQERFDNSDLSA 516
>gi|207079925|ref|NP_001128734.1| DKFZP468L0227 protein [Pongo abelii]
gi|402794126|ref|NP_001258026.1| poly(U)-binding-splicing factor PUF60 isoform e [Homo sapiens]
gi|426360969|ref|XP_004047700.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 1 [Gorilla
gorilla gorilla]
gi|441648309|ref|XP_003280820.2| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2
[Nomascus leucogenys]
gi|55725023|emb|CAH89379.1| hypothetical protein [Pongo abelii]
Length = 513
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 444 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 488
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 489 RWFAGRKVVAEVYDQERFDNSDLSA 513
>gi|296480748|tpg|DAA22863.1| TPA: poly(U)-binding-splicing factor PUF60 [Bos taurus]
Length = 530
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 461 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNG 505
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 506 RWFAGRKVVAEVYDQERFDNSDLSA 530
>gi|313228939|emb|CBY18091.1| unnamed protein product [Oikopleura dioica]
Length = 505
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 15/87 (17%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG+V KVVIY EKQS DE +E+IVKIFV FS Q E + A AL
Sbjct: 434 ENYGKVTKVVIYQEKQSADENAEIIVKIFVQFSLPQ---------------EVQTAISAL 478
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFSG 104
+ R+F G + A++YDQ+ FD D++G
Sbjct: 479 DKRWFNGNQISAQIYDQTAFDMKDYTG 505
>gi|410042306|ref|XP_003951413.1| PREDICTED: poly(U)-binding-splicing factor PUF60 [Pan troglodytes]
Length = 499
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 430 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 474
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 475 RWFAGRKVVAEVYDQERFDNSDLSA 499
>gi|326514938|dbj|BAJ99830.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V KVVIY E+Q +D+ +E IVKIFV F ++A E ++LNG
Sbjct: 569 YGEVVKVVIYTEQQGEDDNAEHIVKIFVEFQTSKQA---------------EKTVESLNG 613
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V+AELYDQ+ + +D SG
Sbjct: 614 RYFGGRAVKAELYDQTAYQADDLSG 638
>gi|402794208|ref|NP_001258029.1| poly(U)-binding-splicing factor PUF60 isoform h [Homo sapiens]
gi|109087698|ref|XP_001087484.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Macaca
mulatta]
gi|332263566|ref|XP_003280822.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 4
[Nomascus leucogenys]
gi|16307289|gb|AAH09734.1| PUF60 protein [Homo sapiens]
gi|119602596|gb|EAW82190.1| fuse-binding protein-interacting repressor, isoform CRA_g [Homo
sapiens]
gi|261859062|dbj|BAI46053.1| poly-U binding splicing factor 60KDa [synthetic construct]
Length = 499
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 430 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 474
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 475 RWFAGRKVVAEVYDQERFDNSDLSA 499
>gi|403302946|ref|XP_003942109.1| PREDICTED: poly(U)-binding-splicing factor PUF60 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 492
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 423 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 467
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 468 RWFAGRKVVAEVYDQERFDNSDLSA 492
>gi|440911935|gb|ELR61552.1| Poly(U)-binding-splicing factor PUF60, partial [Bos grunniens
mutus]
Length = 561
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 492 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNG 536
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 537 RWFAGRKVVAEVYDQERFDNSDLSA 561
>gi|449495396|ref|XP_002188522.2| PREDICTED: poly(U)-binding-splicing factor PUF60 [Taeniopygia
guttata]
Length = 514
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 445 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 489
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 490 RWFAGRKVVAEVYDQERFDNSDLSA 514
>gi|443719882|gb|ELU09834.1| hypothetical protein CAPTEDRAFT_172934 [Capitella teleta]
Length = 635
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 53/85 (62%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQS+DE +EVIVKIFV F +Q A DA +LNG
Sbjct: 566 FGPVNRVIIYQEKQSEDEDAEVIVKIFVEF--LQSP--AVDA-----------GIKSLNG 610
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR+V A+ YDQ +++ ND SG
Sbjct: 611 RYFGGRIVSAQKYDQDMYEANDLSG 635
>gi|431908112|gb|ELK11715.1| Poly(U)-binding-splicing factor PUF60 [Pteropus alecto]
Length = 501
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 432 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 476
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 477 RWFAGRKVVAEVYDQERFDNSDLSA 501
>gi|338728501|ref|XP_001496155.3| PREDICTED: poly(U)-binding-splicing factor PUF60-like isoform 1
[Equus caballus]
Length = 499
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 430 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 474
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 475 RWFAGRKVVAEVYDQERFDNSDLSA 499
>gi|300798352|ref|NP_001178809.1| poly(U)-binding-splicing factor PUF60 [Rattus norvegicus]
Length = 563
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 494 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 538
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 539 RWFGGRKVVAEVYDQERFDNSDLSA 563
>gi|345315810|ref|XP_001511498.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like
[Ornithorhynchus anatinus]
Length = 499
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 430 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 474
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 475 RWFAGRKVVAEVYDQERFDNSDLSA 499
>gi|257196183|ref|NP_082640.2| poly(U)-binding-splicing factor PUF60 isoform a [Mus musculus]
gi|158563798|sp|Q3UEB3.2|PUF60_MOUSE RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|158563997|sp|Q9WV25.2|PUF60_RAT RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor; AltName:
Full=RNA-binding protein Siah-BP; AltName:
Full=Siah-binding protein 1
gi|148697573|gb|EDL29520.1| RIKEN cDNA 2410104I19, isoform CRA_a [Mus musculus]
gi|149066142|gb|EDM16015.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_a [Rattus norvegicus]
Length = 564
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 495 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 539
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 540 RWFGGRKVVAEVYDQERFDNSDLSA 564
>gi|74203983|dbj|BAE28998.1| unnamed protein product [Mus musculus]
Length = 564
Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 495 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 539
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 540 RWFGGRKVVAEVYDQERFDNSDLSA 564
>gi|355714557|gb|AES05043.1| poly-U binding splicing factor 60KDa [Mustela putorius furo]
Length = 230
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 162 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNG 206
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR V AE+YDQ FD+ D S
Sbjct: 207 RWFAGRKVVAEVYDQERFDNRDLS 230
>gi|344236629|gb|EGV92732.1| Poly(U)-binding-splicing factor PUF60 [Cricetulus griseus]
Length = 253
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS E A A LNG
Sbjct: 184 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSMASETHKAIQA---------------LNG 228
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR V AE+YDQ FD++D S
Sbjct: 229 RWFAGRKVVAEVYDQERFDNSDLS 252
>gi|351698432|gb|EHB01351.1| Poly(U)-binding-splicing factor PUF60, partial [Heterocephalus
glaber]
Length = 556
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ +++ +E+IVKIFV FS +E A ALNG
Sbjct: 487 FGAVNRVIIYQEKQGEEDDAEIIVKIFVEFS---------------MASETHKAIQALNG 531
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 532 RWFAGRKVVAEVYDQERFDNSDLSA 556
>gi|449279837|gb|EMC87291.1| Poly(U)-binding-splicing factor PUF60, partial [Columba livia]
Length = 513
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 444 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 488
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 489 RWFAGRKVVAEVYDQERFDNSDLSA 513
>gi|148697575|gb|EDL29522.1| RIKEN cDNA 2410104I19, isoform CRA_c [Mus musculus]
Length = 546
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 477 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 521
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 522 RWFGGRKVVAEVYDQERFDNSDLSA 546
>gi|148697576|gb|EDL29523.1| RIKEN cDNA 2410104I19, isoform CRA_d [Mus musculus]
Length = 553
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 484 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 528
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 529 RWFGGRKVVAEVYDQERFDNSDLSA 553
>gi|426235336|ref|XP_004011640.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60 [Ovis aries]
Length = 506
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 437 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNG 481
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 482 RWFAGRKVVAEVYDQERFDNSDLSA 506
>gi|5524727|gb|AAD44358.1|AF165892_1 RNA-binding protein SiahBP [Rattus norvegicus]
Length = 565
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 496 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 540
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 541 RWFGGRKVVAEVYDQERFDNSDLSA 565
>gi|76677895|ref|NP_598452.2| poly(U)-binding-splicing factor PUF60 isoform b [Mus musculus]
gi|74195824|dbj|BAE30474.1| unnamed protein product [Mus musculus]
gi|74221976|dbj|BAE40622.1| unnamed protein product [Mus musculus]
gi|148697574|gb|EDL29521.1| RIKEN cDNA 2410104I19, isoform CRA_b [Mus musculus]
gi|149066143|gb|EDM16016.1| siah binding protein 1; FBP interacting repressor; pyrimidine tract
binding splicing factor; Ro ribonucleoprotein-binding
protein 1, isoform CRA_b [Rattus norvegicus]
Length = 547
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 478 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 522
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 523 RWFGGRKVVAEVYDQERFDNSDLSA 547
>gi|257196186|ref|NP_001158072.1| poly(U)-binding-splicing factor PUF60 isoform c [Mus musculus]
gi|14714891|gb|AAH10601.1| Puf60 protein [Mus musculus]
Length = 499
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 430 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------MASETHKAIQALNG 474
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 475 RWFGGRKVVAEVYDQERFDNSDLSA 499
>gi|210060966|pdb|3DXB|A Chain A, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060967|pdb|3DXB|B Chain B, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060968|pdb|3DXB|C Chain C, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060969|pdb|3DXB|D Chain D, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060970|pdb|3DXB|E Chain E, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060971|pdb|3DXB|F Chain F, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060972|pdb|3DXB|G Chain G, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
gi|210060973|pdb|3DXB|H Chain H, Structure Of The Uhm Domain Of Puf60 Fused To Thioredoxin
Length = 222
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 153 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 197
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR V AE+YDQ FD++D S
Sbjct: 198 RWFAGRKVVAEVYDQERFDNSDLS 221
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 16/97 (16%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFF 67
+++E Q + +G+VE++VIYNE+QS DD+ + VKIFV F+
Sbjct: 510 LHHEIQEECCKWGRVERLVIYNERQSEDDDPAHADVKIFVQFADP--------------- 554
Query: 68 AEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
EA A AL+GR+F GR VRA LYDQ LFDH D SG
Sbjct: 555 EEAGAAAGALSGRYFGGRTVRARLYDQDLFDHGDLSG 591
>gi|159164265|pdb|2DNY|A Chain A, Solution Structure Of The Third Rna Binding Domain Of Fbp-
Interacting Repressor, Siahbp1
Length = 119
Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 44 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 88
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR V AE+YDQ FD++D S
Sbjct: 89 RWFAGRKVVAEVYDQERFDNSDLS 112
>gi|358439934|pdb|3UE2|A Chain A, Crystal Structure Of A Rna Binding Domain Of Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.23 A Resolution
gi|371927677|pdb|3US5|A Chain A, Crystal Structure Of A Rna-Binding Domain Of A Poly-U
Binding Splicing Factor 60kda (Puf60) From Homo Sapiens
At 1.38 A Resolution
Length = 118
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNG
Sbjct: 49 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------IASETHKAIQALNG 93
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR V AE+YDQ FD++D S
Sbjct: 94 RWFAGRKVVAEVYDQERFDNSDLS 117
>gi|114051121|ref|NP_001039598.1| poly(U)-binding-splicing factor PUF60 [Bos taurus]
gi|122144872|sp|Q2HJG2.1|PUF60_BOVIN RecName: Full=Poly(U)-binding-splicing factor PUF60; AltName:
Full=60 kDa poly(U)-binding-splicing factor
gi|88682957|gb|AAI05448.1| Poly-U binding splicing factor 60KDa [Bos taurus]
Length = 530
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +E+IVKIFV FS +E A LNG
Sbjct: 461 FGAVNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQDLNG 505
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 506 RWFAGRKVVAEVYDQERFDNSDLSA 530
>gi|335310331|ref|XP_003361983.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Sus scrofa]
Length = 362
Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 15/82 (18%)
Query: 23 VEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFF 82
V +V+IY EKQ ++E +E+IVKIFV FS +E A ALNGR+F
Sbjct: 296 VNRVIIYQEKQGEEEDAEIIVKIFVEFS---------------VASETHKAIQALNGRWF 340
Query: 83 AGRMVRAELYDQSLFDHNDFSG 104
AGR V AE+YDQ FD++D S
Sbjct: 341 AGRKVVAEVYDQERFDNSDLSA 362
>gi|348541381|ref|XP_003458165.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 513
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+GQV++V+IY E+Q +++ +EVIVKIFV FS+ AE A ALN
Sbjct: 444 FGQVKRVIIYQERQGEEDDAEVIVKIFVEFSEA---------------AEMNRAIQALNH 488
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD+ D S
Sbjct: 489 RWFGGRKVVAEVYDQERFDNGDLSA 513
>gi|157743332|ref|NP_001099058.1| poly(U)-binding-splicing factor PUF60 [Danio rerio]
gi|157423233|gb|AAI53302.1| LOC562370 protein [Danio rerio]
Length = 518
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +EVIVKIFV FS +E A ALN
Sbjct: 449 FGAVNRVIIYQEKQGEEEDAEVIVKIFVEFSAA---------------SEMNKAIQALNN 493
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ FD++D S
Sbjct: 494 RWFGGRKVIAEVYDQERFDNSDLSA 518
>gi|348555826|ref|XP_003463724.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Cavia porcellus]
Length = 564
Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY K +E +E+IVKIFV FS +E A ALNG
Sbjct: 495 FGAVNRVIIYQGKAGREEDAEIIVKIFVEFS---------------MASETHKAIQALNG 539
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AE+YDQ FD++D S
Sbjct: 540 RWFAGRKVVAEVYDQERFDNSDLSA 564
>gi|410925539|ref|XP_003976238.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 506
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+GQV++V+IY E+Q +++ +EVIVKIFV FS++ AE A ALN
Sbjct: 437 FGQVKRVIIYQERQGEEDDAEVIVKIFVEFSEV---------------AEMNRAIQALNH 481
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+F GR V AE+YDQ F+ +D S
Sbjct: 482 RWFGGRKVAAEVYDQERFETSDLS 505
>gi|47212475|emb|CAF90271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 67.8 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G+V++V++Y E+Q +++ +EVIVKIFV F ++ AE + A ALN
Sbjct: 510 FGRVKRVIVYQERQGEEDGAEVIVKIFVEFGEV---------------AEMDRAIRALNQ 554
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+Y Q FD +D S
Sbjct: 555 RWFGGRQVVAEVYAQERFDSSDLSA 579
>gi|339244819|ref|XP_003378335.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
gi|316972769|gb|EFV56420.1| poly(U)-binding-splicing factor half pint [Trichinella spiralis]
Length = 609
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 60/102 (58%), Gaps = 19/102 (18%)
Query: 5 EKVVIYNEKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDAL 62
E+V Y +++ +E +G+VE+VVIY EK ++D + IVKIFV +S +EAE A+
Sbjct: 525 EEVDEYLQEEITEECGKFGEVEQVVIYQEKPNED--APAIVKIFVKYSNPEEAEKAQSTF 582
Query: 63 NGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+ RFF+ GR + AELYDQ++FD D SG
Sbjct: 583 HNRFFS---------------GRQITAELYDQTMFDLQDLSG 609
>gi|449667931|ref|XP_002156035.2| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Hydra
magnipapillata]
Length = 597
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +VVIY E+Q +++ +EVIVKIFV FSK EAE A + ALNG
Sbjct: 528 FGDVVRVVIYQERQGEEDNAEVIVKIFVEFSKHSEAESA---------------QSALNG 572
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F G ++A++YD+ + D++G
Sbjct: 573 RWFGGNSIQADIYDEDKYKSQDYTG 597
>gi|50344898|ref|NP_001002121.1| poly(U)-binding-splicing factor PUF60-B [Danio rerio]
gi|47940403|gb|AAH71467.1| Poly-U binding splicing factor b [Danio rerio]
Length = 502
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+IY E+Q +++ +E+IVKIFV FS DA E A ALN
Sbjct: 433 YGAVNRVIIYQERQGEEDDAEIIVKIFVEFS---------DA------GEMNKAIQALNN 477
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AELYDQ F+ +D +
Sbjct: 478 RWFAGRKVVAELYDQDRFNSSDLTA 502
>gi|160332383|sp|Q6IQE0.2|PU60B_DANRE RecName: Full=Poly(U)-binding-splicing factor PUF60-B
Length = 516
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 50/85 (58%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+IY E+Q +++ +E+IVKIFV FS DA E A ALN
Sbjct: 447 YGAVNRVIIYQERQGEEDDAEIIVKIFVEFS---------DA------GEMNKAIQALNN 491
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+FAGR V AELYDQ F+ +D +
Sbjct: 492 RWFAGRKVVAELYDQDRFNSSDLTA 516
>gi|432911999|ref|XP_004078817.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 523
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YGQV++V+IY E+Q +++ +++IVKIFV F + E A ALN
Sbjct: 454 YGQVKRVIIYQERQGEEDDADIIVKIFVEFCEAM---------------EMNRAIQALNN 498
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+F GR V AE+YDQ F+++D S
Sbjct: 499 RWFGGRKVVAEVYDQERFENSDLS 522
>gi|324503561|gb|ADY41546.1| Poly(U)-binding-splicing factor half pint [Ascaris suum]
Length = 832
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YGQVE+VVI + + VKIFV F +QEAE AR AL+ R
Sbjct: 769 YGQVEEVVIAQDPTNGS------VKIFVRFGDIQEAEVARQALDKR-------------- 808
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
+FAG+ + A+ YDQ LFDHND++G
Sbjct: 809 -YFAGKEISAQSYDQILFDHNDYTG 832
>gi|410909355|ref|XP_003968156.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Takifugu
rubripes]
Length = 526
Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +++IVKIFV FS +E A ALN
Sbjct: 457 FGTVNRVIIYQEKQGEEEDADIIVKIFVEFSAA---------------SEMNKAIQALND 501
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ F+ +D S
Sbjct: 502 RWFGGRKVVAEVYDQDRFNSSDLSA 526
>gi|47221195|emb|CAG05516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 520
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +++IVKIFV FS +E A ALN
Sbjct: 451 FGTVNRVIIYQEKQGEEEDADIIVKIFVEFSAA---------------SEMNKAIQALND 495
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ F+ +D S
Sbjct: 496 RWFGGRKVVAEVYDQDRFNSSDLSA 520
>gi|317420076|emb|CBN82112.1| Poly(U)-binding-splicing factor PUF60 [Dicentrarchus labrax]
Length = 513
Score = 65.1 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +++IVKIFV FS +E A ALN
Sbjct: 444 FGSVNRVIIYQEKQGEEEDADIIVKIFVEFS---------------MASEMNKAIQALND 488
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ F+ +D S
Sbjct: 489 RWFGGRKVVAEVYDQDRFNSSDLSA 513
>gi|348503274|ref|XP_003439190.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oreochromis
niloticus]
Length = 526
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +++IVKIFV FS +E A ALN
Sbjct: 457 FGSVNRVIIYQEKQGEEEDADIIVKIFVEFS---------------MASEMNKAIQALND 501
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ F+ +D S
Sbjct: 502 RWFGGRKVVAEVYDQDRFNSSDLSA 526
>gi|198424504|ref|XP_002131946.1| PREDICTED: similar to poly-U binding splicing factor 60KDa [Ciona
intestinalis]
Length = 491
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +VVIY EKQS+ E + V VKI+V F+ ++ + + A+ ++LNG
Sbjct: 422 FGSVSRVVIYQEKQSEAEDAPVTVKIYVEFT---DSVFCKKAV------------ESLNG 466
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR + A +Y Q F+HND +G
Sbjct: 467 RWFGGRKIEAIIYPQHKFNHNDLTG 491
>gi|432929636|ref|XP_004081203.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Oryzias
latipes]
Length = 526
Score = 64.3 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+IY EKQ ++E +++IVKIFV FS +E A ALN
Sbjct: 457 FGTVNRVIIYQEKQGEEEDADIIVKIFVEFSAA---------------SEMNKAIQALND 501
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR V AE+YDQ F+ +D S
Sbjct: 502 RWFGGRKVVAEVYDQDRFNSSDLSA 526
>gi|440797518|gb|ELR18604.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 18/94 (19%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DEA YG VE+VVIY E+QS+ + +VI+KIF+ F Q A+ A+ AL
Sbjct: 617 EGEITDEATKYGIVERVVIYQERQSE-KPGDVIIKIFILF---QSADQAQKALT------ 666
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
+LNGR+F GR ++A YD+ F D+S
Sbjct: 667 ------SLNGRWFGGRQIKAAFYDEKKFLAEDYS 694
>gi|393909310|gb|EFO18950.2| Poly(U)-binding-splicing factor half pint [Loa loa]
Length = 769
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V++VVI + + VKIFV F QEA+ AR AL+ R+
Sbjct: 706 YGKVQEVVIAQDPANGS------VKIFVRFDNTQEADTARQALDKRY------------- 746
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
FAGR + A+ YDQ LFDHND+SG
Sbjct: 747 --FAGREISAQNYDQILFDHNDYSG 769
>gi|312086552|ref|XP_003145121.1| Poly(U)-binding-splicing factor half pint [Loa loa]
gi|393909311|gb|EJD75402.1| Poly(U)-binding-splicing factor half pint, variant [Loa loa]
Length = 765
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V++VVI + + VKIFV F QEA+ AR AL+ R+
Sbjct: 702 YGKVQEVVIAQDPANGS------VKIFVRFDNTQEADTARQALDKRY------------- 742
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
FAGR + A+ YDQ LFDHND+SG
Sbjct: 743 --FAGREISAQNYDQILFDHNDYSG 765
>gi|156398787|ref|XP_001638369.1| predicted protein [Nematostella vectensis]
gi|156225489|gb|EDO46306.1| predicted protein [Nematostella vectensis]
Length = 504
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 17/95 (17%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E + DE +G V +VVIY EKQ ++E +EVIVKIFV F+ E
Sbjct: 425 EHEVTDECSKFGTVSRVVIYKEKQGEEEDAEVIVKIFVEFTSPD---------------E 469
Query: 70 AEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+ A L+GR+F GR V+AE Y++ F D SG
Sbjct: 470 TDKATSNLDGRWFGGRAVKAEAYNEDKFLSADLSG 504
>gi|198416925|ref|XP_002124386.1| PREDICTED: similar to poly-U binding splicing factor 60 [Ciona
intestinalis]
Length = 511
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G VE+VVIY EKQ ++E +EVIVKIFV FS + AE E A ALN
Sbjct: 442 FGSVERVVIYQEKQGEEENAEVIVKIFVEFSNL---------------AECEKAVMALNN 486
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F G V A Y + ND +G
Sbjct: 487 RWFGGNKVTATHYSYQRYSANDLTG 511
>gi|402587582|gb|EJW81517.1| hypothetical protein WUBG_07571 [Wuchereria bancrofti]
Length = 493
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V++VVI + + VKIFV F QEA+ AR AL+ R+
Sbjct: 430 YGKVQEVVIAQDPANGS------VKIFVRFDNPQEADTARQALDKRY------------- 470
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
FAGR + A+ YDQ LFDHND+SG
Sbjct: 471 --FAGREISAQNYDQILFDHNDYSG 493
>gi|440793928|gb|ELR15099.1| hypothetical protein ACA1_215710 [Acanthamoeba castellanii str.
Neff]
Length = 98
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 17/92 (18%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E +++ YG VE+VVI+ ++ EA V+VK+F+ F AEA+
Sbjct: 14 EVETEAAKYGHVERVVIHQCREEAGEA--VVVKVFILFQSA---------------AEAQ 56
Query: 72 YARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
A+ AL+GR+FAGRM++A YD+ LF D++
Sbjct: 57 VAQTALHGRWFAGRMIKAAFYDEQLFLAGDYA 88
>gi|170581558|ref|XP_001895732.1| RNA binding protein [Brugia malayi]
gi|158597207|gb|EDP35417.1| RNA binding protein, putative [Brugia malayi]
Length = 275
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V++VVI + + VKIFV F QEA+ AR AL+ R+
Sbjct: 212 YGKVQEVVIAQDPANGS------VKIFVRFDNPQEADTARQALDKRY------------- 252
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
FAGR + A+ YDQ LFDHND+SG
Sbjct: 253 --FAGREISAQNYDQILFDHNDYSG 275
>gi|196009954|ref|XP_002114842.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
gi|190582904|gb|EDV22976.1| hypothetical protein TRIADDRAFT_64128 [Trichoplax adhaerens]
Length = 620
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V++V+IY E+Q +++ ++V+VKIFV F + A A DALNG
Sbjct: 551 YGTVKRVIIYQERQGEEDNADVLVKIFVEFDSPSQ---------------AGNAIDALNG 595
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
R+F GR ++AE YD + + D S
Sbjct: 596 RWFGGRTIKAETYDVTKYSTGDLSA 620
>gi|358335955|dbj|GAA54545.1| poly(U)-binding-splicing factor PUF60 [Clonorchis sinensis]
Length = 511
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 18/94 (19%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
NE + + YG V++V+IY E DE E+I+KIFV F Q++E A+
Sbjct: 436 NEVKEECCNYGSVDRVIIYQEL---DENGELIIKIFVVF---QDSESVDRAIA------- 482
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+LNGR+FAGR V AE YD F+ ND +G
Sbjct: 483 -----SLNGRYFAGRQVVAEPYDLEKFEANDLTG 511
>gi|308505212|ref|XP_003114789.1| CRE-RNP-6 protein [Caenorhabditis remanei]
gi|308258971|gb|EFP02924.1| CRE-RNP-6 protein [Caenorhabditis remanei]
Length = 817
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V+ VVI N AS +VKIFV ++ D+L + + A+ AL+G
Sbjct: 754 YGSVQDVVIANF------ASSGLVKIFVKYA---------DSL------QVDRAKAALDG 792
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G V+AE YDQ LFDH D++G
Sbjct: 793 RFFGGNTVKAEAYDQILFDHADYTG 817
>gi|391343712|ref|XP_003746150.1| PREDICTED: poly(U)-binding-splicing factor PUF60-like [Metaseiulus
occidentalis]
Length = 562
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 16/86 (18%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
+G+V+KV+I+ E+ +D+AS VKIFV F AE A AL+
Sbjct: 492 FGKVQKVLIHMERHGEEDDASTTDVKIFVEFGST---------------AEMHQAIRALH 536
Query: 79 GRFFAGRMVRAELYDQSLFDHNDFSG 104
GRFF GR V AE+YD L+D+ + S
Sbjct: 537 GRFFGGRQVIAEMYDVFLYDNGNLSA 562
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V VVI N AS +VKIFV +S D++ + + A+ AL+G
Sbjct: 686 YGNVIDVVIANF------ASSGLVKIFVKYS---------DSM------QVDRAKAALDG 724
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G V+AE YDQ LFDH D++G
Sbjct: 725 RFFGGNTVKAEAYDQILFDHADYTG 749
>gi|358334696|dbj|GAA40294.2| poly(U)-binding-splicing factor PUF60, partial [Clonorchis
sinensis]
Length = 519
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 17/84 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V++V+++ E D + ++VK+FV F +Q + A ALN G
Sbjct: 452 YGSVQRVIVHQE--PDPSTNTLVVKVFVQFDSVQSVQNAVQALN---------------G 494
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
RFFAGR + AE YD F ND S
Sbjct: 495 RFFAGRQIVAEHYDLHAFTLNDLS 518
>gi|313244755|emb|CBY15469.1| unnamed protein product [Oikopleura dioica]
Length = 2588
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +VVIY E E IVK+FV F+ AE A+ L+G
Sbjct: 2519 YGNVLRVVIYQEVDRLAPGCEPIVKVFVQFTDADGAE---------------TAKKELSG 2563
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFFAGR + A+ YD++ F+ D+S
Sbjct: 2564 RFFAGRKINAQSYDETAFEMKDYSA 2588
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V VVI N AS +VKIFV ++ D++ + + A+ AL+G
Sbjct: 694 FGTVLDVVIANF------ASSGVVKIFVKYA---------DSM------QVDRAKAALDG 732
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G +V+AE YDQ LFDH D++G
Sbjct: 733 RFFGGNIVKAEAYDQILFDHADYTG 757
>gi|268564468|ref|XP_002639117.1| C. briggsae CBR-RNP-6 protein [Caenorhabditis briggsae]
Length = 744
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V VVI N A+ VKIFV ++ D++ + + A+ AL+G
Sbjct: 681 YGNVIDVVIANF------AASGTVKIFVKYA---------DSM------QVDRAKAALDG 719
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G V+AE YDQ LFDH D++G
Sbjct: 720 RFFGGNTVKAEAYDQILFDHADYTG 744
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 21/85 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V VVI N AS +VKIFV ++ D++ + + A+ AL+G
Sbjct: 694 FGTVLDVVIANF------ASSGVVKIFVKYA---------DSM------QVDRAKAALDG 732
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G V+AE YDQ LFDH D++G
Sbjct: 733 RFFGGNSVKAEAYDQILFDHADYTG 757
>gi|45269017|gb|AAS55921.1| fuse-binding protein-interacting repressor SIAHBP1, partial [Sus
scrofa]
Length = 54
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 15/69 (21%)
Query: 36 DEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQS 95
+E +E+IVKIF FS +E A ALNGR+FAGR V AE+YDQ
Sbjct: 1 EEDAEIIVKIFAEFSVA---------------SETHKAIQALNGRWFAGRKVVAEVYDQE 45
Query: 96 LFDHNDFSG 104
FD++D S
Sbjct: 46 RFDNSDLSA 54
>gi|67772135|gb|AAY79320.1| RNA-binding protein SiahBP [Siniperca chuatsi]
Length = 118
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
+G V +V+IY EKQ ++E +++IVKIFV FS E A ALN R+F
Sbjct: 62 FGCVNRVIIYQEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFG 110
>gi|312071759|ref|XP_003138756.1| G-patch domain-containing protein [Loa loa]
gi|307766078|gb|EFO25312.1| G-patch domain-containing protein [Loa loa]
Length = 373
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 20/84 (23%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YGQV KVVI+ Q SDDEA V+IFV F+ + +A A F + LN
Sbjct: 307 YGQVNKVVIFRLLQASDDEA----VRIFVEFTNVGQAIKA--------FVD-------LN 347
Query: 79 GRFFAGRMVRAELYDQSLFDHNDF 102
GRFF GR ++A YD ++ N F
Sbjct: 348 GRFFGGRSIKASFYDLEAYNANHF 371
>gi|170588083|ref|XP_001898803.1| G-patch domain containing protein [Brugia malayi]
gi|158593016|gb|EDP31611.1| G-patch domain containing protein [Brugia malayi]
Length = 373
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 20/84 (23%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YGQV KVVI+ Q SDDEA V+IF+ F+ + +A A F + LN
Sbjct: 307 YGQVNKVVIFRLLQASDDEA----VRIFIEFTNVGQAIKA--------FVD-------LN 347
Query: 79 GRFFAGRMVRAELYDQSLFDHNDF 102
GRFF GR ++A YD ++ N F
Sbjct: 348 GRFFGGRSIKASFYDLEAYNANQF 371
>gi|402594800|gb|EJW88726.1| G-patch domain-containing protein [Wuchereria bancrofti]
Length = 373
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 20/84 (23%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YGQV KVVI+ Q SDDEA V+IF+ F+ + +A A F + LN
Sbjct: 307 YGQVNKVVIFRLLQASDDEA----VRIFIEFTNVGQAIKA--------FVD-------LN 347
Query: 79 GRFFAGRMVRAELYDQSLFDHNDF 102
GRFF GR ++A YD ++ N F
Sbjct: 348 GRFFGGRSIKASFYDLEAYNANQF 371
>gi|348684008|gb|EGZ23823.1| hypothetical protein PHYSODRAFT_255134 [Phytophthora sojae]
Length = 534
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 17/86 (19%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG V K IY S E V+IFV F Q+AE A AL G L
Sbjct: 466 EKYGPVAKCTIYEVTGS--VPPEEAVRIFVQF---QDAEDATKALTG------------L 508
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
NGRFF GR V+A YD+ F+ D +
Sbjct: 509 NGRFFGGRKVKAVYYDERRFERMDIT 534
>gi|225710884|gb|ACO11288.1| Splicing factor 45 [Caligus rogercresseyi]
Length = 417
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G+V++ + K+ +E YG V KVVIY + S+ A E V+IF+ F +++ A A
Sbjct: 332 GEVDEFLEPEVKEECNEKYGDVIKVVIY--EFSNSSAEENAVRIFIEFKRVESAIKAVVD 389
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHN 100
LNGRFF GR V+A YD F+ N
Sbjct: 390 LNGRFF---------------GGREVQANFYDCEKFNSN 413
>gi|168057021|ref|XP_001780515.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667993|gb|EDQ54609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 382
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + A+E V+IFV F + ++ A L+GRFF
Sbjct: 293 DEISSECSKYGTVTRVLIFEITEPNFPATEA-VRIFVQFERSEQTTKALVDLDGRFFG-- 349
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA YD+ F+ N+ +
Sbjct: 350 -------------GRVVRASFYDEDRFNRNELA 369
>gi|432113991|gb|ELK36048.1| Poly(U)-binding-splicing factor PUF60 [Myotis davidii]
Length = 157
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 15/68 (22%)
Query: 36 DEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQS 95
+E +E+IVKIFV FS +E A LNGR+F G V AE+YDQ
Sbjct: 104 EEDAEIIVKIFVEFS---------------MASETHRAIQVLNGRWFVGHKVVAEVYDQE 148
Query: 96 LFDHNDFS 103
FD++D S
Sbjct: 149 RFDNSDLS 156
>gi|226497132|ref|NP_001149789.1| LOC100283416 [Zea mays]
gi|195634671|gb|ACG36804.1| splicing factor 45 [Zea mays]
Length = 382
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 295 DEVASECAKYGTVSRVLIFEITQADFPADEA-VRIFIQFERAEEATKAMIDLQGRFFG-- 351
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V+A +D+ F N+ +
Sbjct: 352 -------------GRVVQATFFDEERFGRNELA 371
>gi|242092048|ref|XP_002436514.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
gi|241914737|gb|EER87881.1| hypothetical protein SORBIDRAFT_10g003990 [Sorghum bicolor]
Length = 384
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 297 DEVASECAKYGTVSRVLIFEITQADFPADEA-VRIFIQFERAEEATKAMVDLQGRFFG-- 353
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V+A +D+ F N+ +
Sbjct: 354 -------------GRVVQATFFDEEKFGRNELA 373
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG VEKV+I+ + S E +E V IFV FS A +ALN
Sbjct: 453 YGLVEKVLIHQD--SAHETNEQFVNIFVVFSDP---------------CSVHNAANALNK 495
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR + AE YD F ND S
Sbjct: 496 RYFAGRQITAEPYDVEAFMMNDLS 519
>gi|194697730|gb|ACF82949.1| unknown [Zea mays]
gi|414885813|tpg|DAA61827.1| TPA: splicing factor 45 [Zea mays]
Length = 382
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 295 DEVASECAKYGTVSRVLIFEITQADFPADEA-VRIFIQFERAEEATKAMIDLQGRFFG-- 351
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V+A +D+ F N+ +
Sbjct: 352 -------------GRVVQATFFDEERFGRNELA 371
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 17/84 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG VEKV+I+ + S E +E V IFV FS A +ALN
Sbjct: 453 YGLVEKVLIHQD--SAHETNEQFVNIFVVFSDP---------------CSVHNAANALNK 495
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+FAGR + AE YD F ND S
Sbjct: 496 RYFAGRQITAEPYDVEAFMMNDLS 519
>gi|320165216|gb|EFW42115.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 570
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 22/84 (26%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G VE+VV++ ++D V IFV F++++EA+ A L ALN
Sbjct: 508 FGTVERVVVHVTSKND-------VAIFVQFAQLEEADAA--VL-------------ALNN 545
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R+F GR VRA+LYD+ F S
Sbjct: 546 RWFGGRQVRAQLYDEGQFQSRQLS 569
>gi|320165239|gb|EFW42138.1| hypothetical protein CAOG_07523 [Capsaspora owczarzaki ATCC 30864]
Length = 598
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 22/84 (26%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G VE+VV++ ++D V IFV F++++EA+ A ALN R+F
Sbjct: 536 FGTVERVVVHVTSKND-------VAIFVQFAQLEEADAAVLALNNRWFG----------- 577
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
GR VRA+LYD+ F S
Sbjct: 578 ----GRQVRAQLYDEGQFQSRQLS 597
>gi|297596920|ref|NP_001043226.2| Os01g0526100 [Oryza sativa Japonica Group]
gi|125570651|gb|EAZ12166.1| hypothetical protein OsJ_02049 [Oryza sativa Japonica Group]
gi|255673308|dbj|BAF05140.2| Os01g0526100 [Oryza sativa Japonica Group]
Length = 108
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 26 SECSKYGTVLRVLIFEITQADFPAEEA-VRIFILFERAEEATKAMIDLEGRFFG------ 78
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA +D+ F N +
Sbjct: 79 ---------GRVVRATFFDEERFGKNQLA 98
>gi|440789699|gb|ELR11001.1| hypothetical protein ACA1_354490 [Acanthamoeba castellanii str.
Neff]
Length = 88
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 27/92 (29%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E +++ YG VE+VVI+ Q +EA E +V +A+
Sbjct: 14 EVETEAAKYGHVERVVIH---QCREEAGEAVV------------------------VKAQ 46
Query: 72 YARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
A+ + +GR+FAGRM++A YD+ LF D++
Sbjct: 47 VAQTSFHGRWFAGRMIKAAFYDEQLFLAGDYT 78
>gi|20521490|dbj|BAB91997.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa
Japonica Group]
gi|21328134|dbj|BAC00713.1| putative DNA-damage repair protein DRT111 precursor [Oryza sativa
Japonica Group]
gi|215769314|dbj|BAH01543.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 368
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 286 SECSKYGTVLRVLIFEITQADFPAEEA-VRIFILFERAEEATKAMIDLEGRFFG------ 338
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA +D+ F N +
Sbjct: 339 ---------GRVVRATFFDEERFGKNQLA 358
>gi|218188368|gb|EEC70795.1| hypothetical protein OsI_02243 [Oryza sativa Indica Group]
Length = 368
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ YG V +V+I+ Q+D A E V+IF+ F + +EA A L GRFF
Sbjct: 286 SECSKYGTVLRVLIFEITQADFPAEEA-VRIFILFERAEEATKAMIDLEGRFFG------ 338
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA +D+ F N +
Sbjct: 339 ---------GRVVRATFFDEERFGKNQLA 358
>gi|255087508|ref|XP_002505677.1| predicted protein [Micromonas sp. RCC299]
gi|226520947|gb|ACO66935.1| predicted protein [Micromonas sp. RCC299]
Length = 471
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E + E +G V +VVI+ + A E V+IF F EAE A
Sbjct: 385 DEVAEECERFGAVVRVVIFEVTDAGFPAPEA-VRIFAEFV---EAE------------SA 428
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
E R ++GRFF GR VRA YD+S F ND
Sbjct: 429 ERCRLEMDGRFFGGRTVRATSYDESKFFANDL 460
>gi|226500638|ref|NP_001149001.1| splicing factor 45 [Zea mays]
gi|195623866|gb|ACG33763.1| splicing factor 45 [Zea mays]
Length = 384
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ Q+D + E V+IF+ F + +EA A L GRFF
Sbjct: 297 DEVASECARYGTVSRVLIFEITQADFPSDEA-VRIFIQFERAEEATKAMVDLQGRFFG-- 353
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V+A +D+ F N+ +
Sbjct: 354 -------------GRVVQATFFDEERFARNELA 373
>gi|158300105|ref|XP_320093.4| AGAP009296-PA [Anopheles gambiae str. PEST]
gi|157013841|gb|EAA15153.4| AGAP009296-PA [Anopheles gambiae str. PEST]
Length = 426
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 45/96 (46%), Gaps = 21/96 (21%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG V VVI+ + + E V+IFV F +M+ A A
Sbjct: 349 EPEVKDECNTKYGDVVTVVIH---EVPNVVPEEAVRIFVEFKRMESAIKA---------- 395
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
D LNGRFF GR VRA Y+Q F++ D G
Sbjct: 396 ----VVD-LNGRFFGGRQVRAGFYNQEKFENMDLGG 426
>gi|303281406|ref|XP_003059995.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458650|gb|EEH55947.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E +G V +V+I+ +S + E V+IFV F+K ++A A+ A + +
Sbjct: 127 EKHGAVHRVMIFEVTESGYDPREA-VRIFVEFTKPEDA--------------AKCANE-M 170
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
+GRFF GR V A YD+ LF+ N+
Sbjct: 171 DGRFFGGRTVAASHYDEGLFEANELG 196
>gi|395520841|ref|XP_003764531.1| PREDICTED: uncharacterized protein LOC100929396 [Sarcophilus
harrisii]
Length = 343
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 23 VEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFF 82
++K++ E + E +E+IVKIFV FS ++ LNG +F
Sbjct: 277 MQKLLRKQESTGEMEDAEIIVKIFVEFS---------------MASQMHKTIQILNGHWF 321
Query: 83 AGRMVRAELYDQSLFDHNDF 102
AGR V AE+YDQ F ++D
Sbjct: 322 AGRKVVAEVYDQERFGNSDL 341
>gi|157115517|ref|XP_001658243.1| hypothetical protein AaeL_AAEL007239 [Aedes aegypti]
gi|108876860|gb|EAT41085.1| AAEL007239-PA [Aedes aegypti]
Length = 419
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG V VVI+ + E + V+IFV F +M+ A A
Sbjct: 342 EPEVKDECNTKYGDVITVVIHEIPKVVPEET---VRIFVEFKRMESAIKA---------- 388
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
D LNGRFF GR VRA Y+Q FD D G
Sbjct: 389 ----VVD-LNGRFFGGRQVRAGFYNQERFDSMDLDG 419
>gi|356576849|ref|XP_003556542.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 392
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IFV F + +E A L+GR+F
Sbjct: 306 DEVGSECAKYGTVTRVLIFEITEPNFPVHEA-VRIFVQFERSEETTKALVDLDGRYFG-- 362
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA YD+ F N+ +
Sbjct: 363 -------------GRVVRASFYDEEKFSKNELA 382
>gi|391345056|ref|XP_003746809.1| PREDICTED: splicing factor 45-like [Metaseiulus occidentalis]
Length = 354
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 38/79 (48%), Gaps = 16/79 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V K VIY E + E V+IFV F + A A A LNG
Sbjct: 287 YGEVVKCVIY-ELPGPEINPEEAVRIFVEF---------------KNIAHAIKAVVDLNG 330
Query: 80 RFFAGRMVRAELYDQSLFD 98
RFF GR+VRA YDQ F+
Sbjct: 331 RFFGGRVVRAGFYDQEKFN 349
>gi|166694|gb|AAA73382.1| unnamed protein product [Arabidopsis thaliana]
Length = 383
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 26/100 (26%)
Query: 14 QSDDE----------AYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALN 63
Q DDE YG V +V+I+ + + E V+IFV FS+ +E A L+
Sbjct: 291 QVDDELEDEVGGECAKYGTVTRVLIFEITEPNFPVHEA-VRIFVQFSRPEETTKALVDLD 349
Query: 64 GRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+F GR VRA YD+ F N+ +
Sbjct: 350 GRYFG---------------GRTVRATFYDEEKFSKNELA 374
>gi|357475093|ref|XP_003607832.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
gi|355508887|gb|AES90029.1| DNA-damage-repair/toleration protein DRT111 [Medicago truncatula]
Length = 390
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IFV F + +E A L+GR+F
Sbjct: 304 DEVGSECAKYGTVTRVLIFEITEPNFPTDEA-VRIFVQFERSEETTKALVDLDGRYFG-- 360
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR VRA YD+ F N+ +
Sbjct: 361 -------------GRTVRATFYDEDKFSKNELA 380
>gi|15220757|ref|NP_174336.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
gi|20141383|sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111,
chloroplastic; Flags: Precursor
gi|6634771|gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repair/Toleration
protein (DRT111) precurser, and contains a G-patch
PF|01585 domain and RNA recognition PF|00076 motif. EST
gb|AA395591 comes from this gene [Arabidopsis thaliana]
gi|15028005|gb|AAK76533.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|20259641|gb|AAM14338.1| putative DNA damage repair protein [Arabidopsis thaliana]
gi|332193110|gb|AEE31231.1| DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana]
Length = 387
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + E V+IFV FS+ +E A L+GR+F
Sbjct: 311 YGTVTRVLIFEITEPNFPVHEA-VRIFVQFSRPEETTKALVDLDGRYFG----------- 358
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
GR VRA YD+ F N+ +
Sbjct: 359 ----GRTVRATFYDEEKFSKNELA 378
>gi|321465609|gb|EFX76609.1| hypothetical protein DAPPUDRAFT_306107 [Daphnia pulex]
Length = 381
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V KVVI+ +++E + V+IFV F +M+ A A LNGRFF
Sbjct: 315 YGDVNKVVIFEVPNAEEEEA---VRIFVEFKRMEAAIKAVIDLNGRFF------------ 359
Query: 80 RFFAGRMVRAELYDQSLF 97
AGR V+A YD F
Sbjct: 360 ---AGRQVKAGFYDVERF 374
>gi|312382254|gb|EFR27775.1| hypothetical protein AND_05136 [Anopheles darlingi]
Length = 178
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 21/96 (21%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG V VVI+ E S V+IFV F +++ A A
Sbjct: 101 EPEVKDECNTKYGDVVTVVIHEVPNVVPEES---VRIFVEFKRIESAIKA---------- 147
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
D LNGRFF GR VRA Y+Q F++ D G
Sbjct: 148 ----VVD-LNGRFFGGRQVRAGFYNQERFENMDLGG 178
>gi|297845986|ref|XP_002890874.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
gi|297336716|gb|EFH67133.1| hypothetical protein ARALYDRAFT_473276 [Arabidopsis lyrata subsp.
lyrata]
Length = 385
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 16/84 (19%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + E V+IFV FS+ +E A L+GR+F
Sbjct: 309 YGTVTRVLIFEITEPNFPVHEA-VRIFVQFSRPEETTKALVDLDGRYFG----------- 356
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
GR VRA YD+ F N+ +
Sbjct: 357 ----GRTVRATFYDEEKFSKNELA 376
>gi|224061272|ref|XP_002300401.1| predicted protein [Populus trichocarpa]
gi|222847659|gb|EEE85206.1| predicted protein [Populus trichocarpa]
Length = 366
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ E + E V+IFV F + +E A L+GRFF
Sbjct: 281 DEVGSECAKYGTVTRVLIF-EITEPNFPREEAVRIFVQFERSEETTKALIDLDGRFFG-- 337
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
G +VRA +D+ F +N+ +
Sbjct: 338 -------------GNVVRARFFDEEKFSNNELA 357
>gi|225444029|ref|XP_002281743.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic [Vitis vinifera]
Length = 383
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IFV F + +E A L+GRFF
Sbjct: 297 DEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEETTKALVDLDGRFF--- 352
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V A YD+ F N+ +
Sbjct: 353 ------------GGRVVHATFYDEDRFSKNELA 373
>gi|356521610|ref|XP_003529447.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Glycine max]
Length = 384
Score = 42.7 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IFV F + +E A L+GR+F
Sbjct: 298 DEVGSECAKYGIVTRVLIFEITEPNFPVHEA-VRIFVQFERSEETTKALVDLDGRYFG-- 354
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA YD+ F N+ +
Sbjct: 355 -------------GRVVRATFYDEEKFSKNELA 374
>gi|147807935|emb|CAN77677.1| hypothetical protein VITISV_023439 [Vitis vinifera]
Length = 366
Score = 42.7 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IFV F + +E A L+GRFF
Sbjct: 280 DEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEETTKALVDLDGRFF--- 335
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V A YD+ F N+ +
Sbjct: 336 ------------GGRVVHATFYDEDRFSKNELA 356
>gi|91083973|ref|XP_975149.1| PREDICTED: similar to splicing factor 45 [Tribolium castaneum]
gi|270006716|gb|EFA03164.1| hypothetical protein TcasGA2_TC013083 [Tribolium castaneum]
Length = 387
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 18/80 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ ++ E E V+IFV F +++ A A D LNG
Sbjct: 321 YGEVTSVIIH---ETQAENPEEAVRIFVEFRRIESAIKA--------------VVD-LNG 362
Query: 80 RFFAGRMVRAELYDQSLFDH 99
RFF GR V+A YD FD+
Sbjct: 363 RFFGGRQVKASFYDTEKFDN 382
>gi|340372917|ref|XP_003384990.1| PREDICTED: splicing factor 45-like [Amphimedon queenslandica]
Length = 425
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 21/86 (24%)
Query: 20 YGQVEKVVIY--NEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
YG+V +IY E SDDEA V+IFV F K +D+ A A L
Sbjct: 357 YGEVTNCLIYEIPEGASDDEA----VRIFVEFGK-------KDS--------AIKAVIDL 397
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
NGRFF GR +RA Y + F + D +
Sbjct: 398 NGRFFGGRTIRAGFYSEERFSNFDLA 423
>gi|340506650|gb|EGR32741.1| u2 snrnp auxilliary splicing factor, putative [Ichthyophthirius
multifiliis]
Length = 276
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
IY + QS+ E G +EKV I + + KIFV F + +A+ AR LNGR +
Sbjct: 193 IYQDVQSECEKIGPIEKVEIVRPCKMTGICPPSVGKIFVKFKYLLKAKRARHVLNGRTYN 252
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
+ R V A Y + FD +F
Sbjct: 253 K---------------RTVVASFYPEEKFDCKEF 271
>gi|449433648|ref|XP_004134609.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Cucumis sativus]
Length = 372
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ YG V +V+I+ + + E V+IFV F + +E A L+GR+F
Sbjct: 290 SECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEETTKALVDLDGRYFG------ 342
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA YD+ F N+ +
Sbjct: 343 ---------GRVVRATFYDEERFSKNELA 362
>gi|405961750|gb|EKC27501.1| Xanthine dehydrogenase [Crassostrea gigas]
Length = 1588
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 23/105 (21%)
Query: 2 GQVEKVVIYNEKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYAR 59
G+V+K + E ++ +E YG+V K VI+ DDE + V+IFV F ++ A A
Sbjct: 1500 GEVDKDL---EPETAEECTKYGKVIKCVIFEIPHGDDEEA---VRIFVEFERVDSAIKAI 1553
Query: 60 DALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
LNGR+F GR+V+A Y+ F D G
Sbjct: 1554 IDLNGRYF---------------GGRIVKACFYNLDKFRRLDLGG 1583
>gi|449531990|ref|XP_004172968.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like, partial [Cucumis sativus]
Length = 145
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ YG V +V+I+ + + E V+IFV F + +E A L+GR+F
Sbjct: 63 SECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEETTKALVDLDGRYFG------ 115
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+VRA YD+ F N+ +
Sbjct: 116 ---------GRVVRATFYDEERFSKNELA 135
>gi|224114585|ref|XP_002316803.1| predicted protein [Populus trichocarpa]
gi|222859868|gb|EEE97415.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 41.6 bits (96), Expect = 0.057, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ E + E V+IF+ F + +E A L+GRFF
Sbjct: 277 DEVASECAKYGTVTRVLIF-EITELNFPREEAVRIFIQFERSEETTKALIDLDGRFFG-- 333
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
G +VRA YD+ F N+ +
Sbjct: 334 -------------GNVVRATFYDEERFSKNELA 353
>gi|405117653|gb|AFR92428.1| hypothetical protein CNAG_00294 [Cryptococcus neoformans var.
grubii H99]
Length = 627
Score = 41.6 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 2 GQVEKVV--IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYAR 59
G VE++ + NE + YG VE+VV++ + E E + ++FV FS M
Sbjct: 536 GSVEEIDEDLVNEIGEECSNYGIVERVVLHLVEPPPPEPEECL-RVFVVFSGM------- 587
Query: 60 DALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
A A A L+GRFF GR ++A +D++ FD D G
Sbjct: 588 --------AGAWRAIKELDGRFFGGRNIKATYFDETRFDKGDRDG 624
>gi|321251537|ref|XP_003192098.1| hypothetical protein CGB_B3280W [Cryptococcus gattii WM276]
gi|317458566|gb|ADV20311.1| Hypothetical protein CGB_B3280W [Cryptococcus gattii WM276]
Length = 628
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 2 GQVEKV--VIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYAR 59
G VE++ + NE + YG VE+VV++ + E E + ++FV FS M
Sbjct: 537 GSVEEIDEELVNEIGEECSNYGIVERVVLHLVEPPPPEPEECL-RVFVVFSGM------- 588
Query: 60 DALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
A A A L+GRFF GR ++A +D++ FD D G
Sbjct: 589 --------AGAWRAIKELDGRFFGGRNIKATYFDETRFDKGDRDG 625
>gi|332374526|gb|AEE62404.1| unknown [Dendroctonus ponderosae]
Length = 392
Score = 41.2 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 18/98 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G+V+ + K + YG V +I+ D E + V+IFV F +++ A A
Sbjct: 308 GEVDDDLEPEVKDECNTKYGPVASCIIHEIPHDDPEEA---VRIFVEFQRIESAIKA--- 361
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDH 99
D LNGRFF GR V+A YD FD+
Sbjct: 362 -----------VVD-LNGRFFGGRQVKATFYDTEKFDN 387
>gi|325188176|emb|CCA22716.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 401
Score = 41.2 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 13 KQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEY 72
K+ + YG V +IY + S EA ++IFV F +Q+A+ A LNGRF
Sbjct: 330 KEECSQKYGPVRNCIIY-KVVSHPEA----IRIFVEFENVQDADRAVAGLNGRF------ 378
Query: 73 ARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
F GR V A Y++S F DFS
Sbjct: 379 ---------FGGRKVLATNYNESKFRRLDFSA 401
>gi|167536803|ref|XP_001750072.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771401|gb|EDQ85068.1| predicted protein [Monosiga brevicollis MX1]
Length = 475
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 22/95 (23%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E ++ +GQV K ++ + DD+A V+IFV F+ + A AR
Sbjct: 394 ETANECSRFGQVTKCTVFECPRGSVRDDQA----VRIFVEFADLPAA--AR--------- 438
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
AR ++GRFF GR VRA +D F D +
Sbjct: 439 ----ARQEMHGRFFGGRQVRASFFDADRFARQDLA 469
>gi|58258549|ref|XP_566687.1| hypothetical protein CNA02820 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222824|gb|AAW40868.1| hypothetical protein CNA02820 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 622
Score = 41.2 bits (95), Expect = 0.075, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 18/105 (17%)
Query: 2 GQVEKV--VIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYAR 59
G VE++ + NE + YG VE+VV++ + E E + ++FV FS M
Sbjct: 531 GSVEEIDEELVNEIGEECSNYGIVERVVLHLVEPPPPEPEECL-RVFVVFSGM------- 582
Query: 60 DALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
A A A L+GRFF GR ++A +D++ FD D G
Sbjct: 583 --------AGAWRAIKELDGRFFGGRNIKATYFDETRFDKGDRDG 619
>gi|392577577|gb|EIW70706.1| hypothetical protein TREMEDRAFT_68179 [Tremella mesenterica DSM
1558]
Length = 628
Score = 41.2 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 16/85 (18%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG VE+VV++ + ++ SE + +IF+ +S M A A A L+G
Sbjct: 557 YGIVERVVLHMAEPVPEDPSECL-RIFIVYSGM---------------AGAWRATRELDG 600
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
RFF G+ +R +D+ FD + G
Sbjct: 601 RFFGGKKLRVRYFDEGRFDRGERDG 625
>gi|326503228|dbj|BAJ99239.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ +G V +V+I+ Q++ A E V+IFV F + +++ A E
Sbjct: 297 DEIASECSKFGAVLRVLIFEITQANFPADEA-VRIFVLFERTEDSTKA--------LVE- 346
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
L GR+F GR+V A +D+ F+ N+ +
Sbjct: 347 ------LEGRYFGGRIVHATFFDEGRFERNELA 373
>gi|326488349|dbj|BAJ93843.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512194|dbj|BAJ96078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ +G V +V+I+ Q++ A E V+IFV F + +++ A E
Sbjct: 297 DEIASECSKFGAVLRVLIFEITQANFPADEA-VRIFVLFERTEDSTKA--------LVE- 346
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
L GR+F GR+V A +D+ F+ N+ +
Sbjct: 347 ------LEGRYFGGRIVHATFFDEGRFERNELA 373
>gi|156302100|ref|XP_001617446.1| hypothetical protein NEMVEDRAFT_v1g231688 [Nematostella vectensis]
gi|156193855|gb|EDO25346.1| predicted protein [Nematostella vectensis]
Length = 158
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 21/86 (24%)
Query: 20 YGQVEKVVIYNEK--QSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
YG+V KV+IY DDEA V+IFV F++M+ A A D L
Sbjct: 89 YGEVVKVIIYEIPVGAPDDEA----VRIFVEFTRMESAIKA--------------VVD-L 129
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
NGR+F GR V+A ++ F D +
Sbjct: 130 NGRYFGGRTVKANFFNLDKFRRLDLA 155
>gi|156380987|ref|XP_001632048.1| predicted protein [Nematostella vectensis]
gi|156219098|gb|EDO39985.1| predicted protein [Nematostella vectensis]
Length = 396
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 21/86 (24%)
Query: 20 YGQVEKVVIYNEK--QSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
YG+V KV+IY DDEA V+IFV F++M+ A A D L
Sbjct: 327 YGEVVKVIIYEIPVGAPDDEA----VRIFVEFTRMESAIKA--------------VVD-L 367
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
NGR+F GR V+A ++ F D +
Sbjct: 368 NGRYFGGRTVKANFFNLDKFRRLDLA 393
>gi|237836525|ref|XP_002367560.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|211965224|gb|EEB00420.1| RNA-binding protein, putative [Toxoplasma gondii ME49]
gi|221484014|gb|EEE22318.1| hypothetical protein TGGT1_018190 [Toxoplasma gondii GT1]
gi|221505287|gb|EEE30941.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 532
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 23/94 (24%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E + + +G +++V ++ K++ V+IFV FS + A R+A+
Sbjct: 462 DEVREECSKFGSIKRVEVHTLKET--------VRIFVEFSDLSGA---REAI-------- 502
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+L+GR+F GR + A YDQ LF ++
Sbjct: 503 ----PSLHGRWFGGRQIIANTYDQELFHQGEYEA 532
>gi|449672593|ref|XP_004207745.1| PREDICTED: splicing factor 45-like [Hydra magnipapillata]
Length = 340
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 18/85 (21%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG++ KV+I+ + D E V+IFV F +++ A A LNGRFF
Sbjct: 274 YGEINKVLIF---EIPDAVEEEAVRIFVEFKRIESAVKALVDLNGRFF------------ 318
Query: 80 RFFAGRMVRAELYDQSLFDHNDFSG 104
GR V A+ Y+ F D +G
Sbjct: 319 ---GGRSVSAQFYNLDRFRRLDLAG 340
>gi|297740820|emb|CBI31002.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
+ +E S+ YG V +V+I+ + + E V+IFV F + +E A L+GRFF
Sbjct: 82 LEDEVGSECAKYGTVTRVLIFEITEPNFPVDEA-VRIFVQFERSEETTKALVDLDGRFF- 139
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
GR+V A YD+ F N+ +
Sbjct: 140 --------------GGRVVHATFYDEDRFSKNELA 160
>gi|256084520|ref|XP_002578476.1| hypothetical protein [Schistosoma mansoni]
gi|353229232|emb|CCD75403.1| hypothetical protein Smp_161750 [Schistosoma mansoni]
Length = 472
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 18/78 (23%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V +IY ++ D+ +V+IFV F E+E A A A LNG
Sbjct: 401 YGKVVMCMIYELPEAPDDE---VVRIFVEF----ESEEA-----------ATKAVLDLNG 442
Query: 80 RFFAGRMVRAELYDQSLF 97
RFFAGR+V+A YD F
Sbjct: 443 RFFAGRVVKAGFYDAEKF 460
>gi|413953116|gb|AFW85765.1| splicing factor 45 [Zea mays]
Length = 384
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 22/98 (22%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQS---DDEASEVIVKIFVSFSKMQEAEYARDALNGR 65
+ +E S+ YG V +V+I+ Q+ DEA V+IF+ F + +EA A L GR
Sbjct: 295 LEDEVASECARYGTVSRVLIFEITQAYFPSDEA----VRIFIQFERAEEATKAMVDLQGR 350
Query: 66 FFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
FF GR+V+A +D+ F N+ +
Sbjct: 351 FFG---------------GRVVQATFFDEERFARNELA 373
>gi|390337510|ref|XP_797513.2| PREDICTED: splicing factor 45-like isoform 2 [Strongylocentrotus
purpuratus]
gi|390337512|ref|XP_003724580.1| PREDICTED: splicing factor 45-like isoform 1 [Strongylocentrotus
purpuratus]
Length = 418
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E + YG+V KV+IY + A+E V+IFV F++++ A A
Sbjct: 344 ETAEECSKYGEVVKVLIYEDPLK--VATEA-VRIFVEFTRVEAAVKA------------- 387
Query: 72 YARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR+V+ YD F
Sbjct: 388 -VVD-LNGRFFGGRIVKGSFYDPQKF 411
>gi|384493179|gb|EIE83670.1| hypothetical protein RO3G_08375 [Rhizopus delemar RA 99-880]
Length = 475
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 17/102 (16%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G+V+ + + E + YG+VE+ +I+ E V+IFV FS ++ A+ A
Sbjct: 382 GEVDDM-LQEETAEECSKYGKVERCLIF-EVPRGQVPEHKAVRIFVKFSDVESAKRAIQD 439
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
LNGRFF GR V A YD FD D +
Sbjct: 440 LNGRFF---------------GGRSVSASYYDTKRFDKLDLA 466
>gi|440803557|gb|ELR24448.1| Gpatch domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 345
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E + YG V + IY EK S+ V+IFV F+ + + A A+N
Sbjct: 263 SETAEECTKYGPVVRCKIYEEKNPM-VPSDKSVRIFVQFTTL---DSALKAIN------- 311
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
+L+GRFFA R V A +D+ ++H D +
Sbjct: 312 -----SLHGRFFAKRQVEAIFFDEERWEHGDLA 339
>gi|194767538|ref|XP_001965872.1| GF15900 [Drosophila ananassae]
gi|190619348|gb|EDV34872.1| GF15900 [Drosophila ananassae]
Length = 401
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 21/89 (23%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG+V V+I+ ++ A E VKIFV F +++ A A
Sbjct: 325 EPEVKDECHTKYGEVNSVIIH---EAFGTAPEDAVKIFVEFKRIESAIKA---------- 371
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 372 ----VVD-LNGRFFGGRQVRALFYNYDKF 395
>gi|255564401|ref|XP_002523197.1| DNA-damage repair protein drt111, putative [Ricinus communis]
gi|223537604|gb|EEF39228.1| DNA-damage repair protein drt111, putative [Ricinus communis]
Length = 387
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 22/96 (22%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSD---DEASEVIVKIFVSFSKMQEAEYARDALNGRFF 67
+E S+ YG V +V+I+ + + DEA V+IFV F + +E A L+GRFF
Sbjct: 302 DEVGSECAKYGTVTRVLIFEITEPNFPRDEA----VRIFVQFERSEETTKALVDLDGRFF 357
Query: 68 AEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
G +V A YD+ F N+ +
Sbjct: 358 ---------------GGNVVHATFYDEEKFSKNELA 378
>gi|241999926|ref|XP_002434606.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
gi|215497936|gb|EEC07430.1| DNA-damage-repair/toleration protein DRT111, putative [Ixodes
scapularis]
Length = 379
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + YG+V + +I+ SDDEA V+IF+ F +++ A A
Sbjct: 305 ETKEECSKYGEVVRCLIFEIPGVSDDEA----VRIFIEFKRLESAIKA------------ 348
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
D NGR+F GR+V+A YD F
Sbjct: 349 --VVDT-NGRYFGGRVVKASFYDHDKF 372
>gi|109706823|gb|ABG42998.1| splicing factor 45 [Bombyx mori]
Length = 392
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V KV+I+ + + S+ V+IFV F +++ A A
Sbjct: 308 GDVDEELEPEVKDECNTKYGEVVKVLIF---EMPNVPSDEAVRIFVEFKRIESAIKA--- 361
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFD 98
D LNGRFF GR V+A YD F+
Sbjct: 362 -----------VVD-LNGRFFGGRQVKAGFYDVEKFN 386
>gi|195483222|ref|XP_002086892.1| GE10978 [Drosophila yakuba]
gi|194187173|gb|EDX00757.1| GE10978 [Drosophila yakuba]
Length = 367
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 284 GDVDEELEPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--- 337
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 338 -----------VVD-LNGRFFGGRQVRAGFYNYDKF 361
>gi|328771203|gb|EGF81243.1| hypothetical protein BATDEDRAFT_87866 [Batrachochytrium
dendrobatidis JAM81]
Length = 574
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 1 YGQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARD 60
+G++++ + +E + + E YG V +VV++ +K S+ +V ++V F + A AR
Sbjct: 494 FGEIDEF-LQDEIKQECEKYGLVNRVVLWQDKNRT-YTSDDLVMVYVEFGSVDVAIKARL 551
Query: 61 ALNGRFFA 68
AL+GRFF
Sbjct: 552 ALDGRFFG 559
>gi|427784315|gb|JAA57609.1| Putative mrna splicing factor [Rhipicephalus pulchellus]
Length = 386
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E + + YG+V + +IY DE + V+IF+ F M A A
Sbjct: 312 ETKEECSKYGEVVRCLIYEMPGVADEDA---VRIFIEFKSM---------------ASAI 353
Query: 72 YARDALNGRFFAGRMVRAELYDQSLF 97
A NGR+F GR+V+A YD F
Sbjct: 354 KAVVDTNGRYFGGRIVKASFYDHDKF 379
>gi|195355939|ref|XP_002044442.1| GM11754 [Drosophila sechellia]
gi|194130810|gb|EDW52853.1| GM11754 [Drosophila sechellia]
Length = 400
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 317 GDVDEELEPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--- 370
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 371 -----------VVD-LNGRFFGGRQVRAGFYNYDKF 394
>gi|427784313|gb|JAA57608.1| Putative spf45 [Rhipicephalus pulchellus]
Length = 386
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 18/86 (20%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E + + YG+V + +IY DE + V+IF+ F M A A
Sbjct: 312 ETKEECSKYGEVVRCLIYEMPGVADEDA---VRIFIEFKSM---------------ASAI 353
Query: 72 YARDALNGRFFAGRMVRAELYDQSLF 97
A NGR+F GR+V+A YD F
Sbjct: 354 KAVVDTNGRYFGGRIVKASFYDHDKF 379
>gi|60600259|gb|AAX26673.1| unknown [Schistosoma japonicum]
Length = 182
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V +IY ++ D+ +V+IFV F + A A L+ LNG
Sbjct: 111 YGKVVMCMIYELPEAPDDE---VVRIFVEFDSEEAATKA--VLD-------------LNG 152
Query: 80 RFFAGRMVRAELYDQSLF 97
RFFAGR+V+A YD F
Sbjct: 153 RFFAGRVVKAGFYDAEKF 170
>gi|76155513|gb|AAX26804.2| SJCHGC01849 protein [Schistosoma japonicum]
Length = 239
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 22/78 (28%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ D V+IF+ F + +A+ A ALN R+
Sbjct: 177 YGSVLRVLIHIMTNQD-------VRIFIQFDRSDDAKAACSALNQRY------------- 216
Query: 80 RFFAGRMVRAELYDQSLF 97
FAGR+V+A LYD+ F
Sbjct: 217 --FAGRVVQARLYDEERF 232
>gi|114051960|ref|NP_001040441.1| RNA binding motif protein 17 [Bombyx mori]
gi|95102902|gb|ABF51392.1| RNA binding motif protein 17 [Bombyx mori]
Length = 392
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 18/97 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V KV+I+ + + S+ V+I V F +M+ A A
Sbjct: 308 GDVDEELEPEVKDECNTKYGEVVKVLIF---EMPNVPSDEAVRILVEFKRMESAIKA--- 361
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFD 98
D LNGRFF GR V+A YD F+
Sbjct: 362 -----------VVD-LNGRFFGGRQVKAGFYDVEKFN 386
>gi|151567827|pdb|2PE8|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 (free
Form)
gi|151567828|pdb|2PEH|A Chain A, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
gi|151567830|pdb|2PEH|B Chain B, Crystal Structure Of The Uhm Domain Of Human Spf45 In
Complex With Sf3b155-Ulm5
Length = 105
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 29 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA------------ 72
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
D LNGR+F GR+V+A Y+ F D +
Sbjct: 73 --VVD-LNGRYFGGRVVKACFYNLDKFRVLDLA 102
>gi|224113627|ref|XP_002332520.1| predicted protein [Populus trichocarpa]
gi|222832632|gb|EEE71109.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E S+ YG V +V+I+ + + E V+IF+ F + +E A L+GRFF
Sbjct: 12 DEVASECAKYGTVTRVLIFEITELNFPREEA-VRIFIQFERSEETTKALIDLDGRFFG-- 68
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
G +VRA YD+ F N+ +
Sbjct: 69 -------------GNVVRATFYDEERFSKNELA 88
>gi|195998107|ref|XP_002108922.1| hypothetical protein TRIADDRAFT_19511 [Trichoplax adhaerens]
gi|190589698|gb|EDV29720.1| hypothetical protein TRIADDRAFT_19511, partial [Trichoplax
adhaerens]
Length = 88
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 18/79 (22%)
Query: 19 AYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
+YG VE+V+I+ ++ +E + V+IFV F + + A A AL N
Sbjct: 22 SYGAVERVLIHELPEATEELA---VRIFVEFKRQESAVKAAIAL---------------N 63
Query: 79 GRFFAGRMVRAELYDQSLF 97
GR+F GR V+ + +D + F
Sbjct: 64 GRYFGGRNVKVKFWDYNKF 82
>gi|357623541|gb|EHJ74651.1| splicing factor 45 [Danaus plexippus]
Length = 394
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V KV+I+ + + S+ V+IFV F +++ A A
Sbjct: 310 GDVDEELEPEVKDECNTKYGEVVKVLIF---EMPNAPSDEAVRIFVEFKRIESAIKAVVD 366
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
LNGRFF GR V+A YD F
Sbjct: 367 LNGRFF---------------GGRQVKAGFYDVEKF 387
>gi|195552366|ref|XP_002076446.1| GD17712 [Drosophila simulans]
gi|194201699|gb|EDX15275.1| GD17712 [Drosophila simulans]
Length = 403
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 320 GDVDEELEPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--- 373
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 374 -----------VVD-LNGRFFGGRQVRAGFYNYDKF 397
>gi|308801273|ref|XP_003077950.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
gi|116056401|emb|CAL52690.1| U2 snRNP auxiliary factor, large subunit (ISS) [Ostreococcus tauri]
Length = 388
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
YG++ VVI +S + + I K+FV + +++A ARDALNGR F
Sbjct: 322 YGKIISVVIPRPSKSGESVTG-IGKVFVRYESVEDATKARDALNGRRFG 369
>gi|193613005|ref|XP_001950928.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
gi|193629687|ref|XP_001945492.1| PREDICTED: splicing factor 45-like [Acyrthosiphon pisum]
Length = 404
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 35/73 (47%), Gaps = 18/73 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V KVVIY D E + V+IFV F +++ A A D LNG
Sbjct: 338 YGDVNKVVIYEVPNVDHEEA---VRIFVEFKRIESAIKA--------------VVD-LNG 379
Query: 80 RFFAGRMVRAELY 92
RFF GR V+A Y
Sbjct: 380 RFFGGRQVKAGFY 392
>gi|119606812|gb|EAW86406.1| RNA binding motif protein 17, isoform CRA_b [Homo sapiens]
Length = 127
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 51 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA------------ 94
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
D LNGR+F GR+V+A Y+ F D +
Sbjct: 95 --VVD-LNGRYFGGRVVKACFYNLDKFRVLDLA 124
>gi|358337076|dbj|GAA29745.2| splicing factor 45 [Clonorchis sinensis]
Length = 445
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 20/79 (25%)
Query: 20 YGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YG+V +I+ + DDEA V+IFV F A A L+ LN
Sbjct: 374 YGKVVSCMIFELADTPDDEA----VRIFVEFESEDGATKA--VLD-------------LN 414
Query: 79 GRFFAGRMVRAELYDQSLF 97
GRFFAGR+V+A YD F
Sbjct: 415 GRFFAGRVVKAGFYDAEKF 433
>gi|452823555|gb|EME30564.1| U2 snRNP auxiliary factor large subunit, putative isoform 1
[Galdieria sulphuraria]
Length = 522
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V +V I ++D+ + K+FVSF + +AE A FA AL G
Sbjct: 455 YGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKA--------FA-------ALTG 499
Query: 80 RFFAGRMVRAELYDQ 94
R F G+ V A YD+
Sbjct: 500 RRFGGKSVIANYYDE 514
>gi|302825086|ref|XP_002994178.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
gi|300137979|gb|EFJ04768.1| hypothetical protein SELMODRAFT_163366 [Selaginella moellendorffii]
Length = 399
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E S+ +G V V+I+ + D +E V+IFV F + +A A A+
Sbjct: 318 EVASECSKFGVVTSVLIFEITEHDYAPTEA-VRIFVQFERADQASKA--------LAD-- 366
Query: 72 YARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
L+GRFF GR+VR +D+ F N+ +
Sbjct: 367 -----LDGRFFGGRVVRGSYFDEERFARNELA 393
>gi|357113978|ref|XP_003558778.1| PREDICTED: DNA-damage-repair/toleration protein DRT111,
chloroplastic-like [Brachypodium distachyon]
Length = 380
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 16/84 (19%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V +V+I+ Q++ A E V+IF+ F +++E+ A L GRFF
Sbjct: 303 FGTVVRVLIFEITQANFPADEA-VRIFIQFERVEESIKAMIDLEGRFF------------ 349
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
GR+V A +++ F N+ +
Sbjct: 350 ---GGRVVHATFFNEERFGRNELA 370
>gi|194877371|ref|XP_001973867.1| GG21408 [Drosophila erecta]
gi|190657054|gb|EDV54267.1| GG21408 [Drosophila erecta]
Length = 406
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 323 GDVDEELEPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKAVVD 379
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
LNGRFF GR VRA Y+ F
Sbjct: 380 LNGRFFG---------------GRQVRAGFYNYDKF 400
>gi|302764030|ref|XP_002965436.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
gi|300166250|gb|EFJ32856.1| hypothetical protein SELMODRAFT_84505 [Selaginella moellendorffii]
Length = 393
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 15 SDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYAR 74
S+ +G V V+I+ + D +E V+IFV F + +A A A+
Sbjct: 315 SECSKFGVVTSVLIFEITEHDYAPTEA-VRIFVQFERADQASKA--------LAD----- 360
Query: 75 DALNGRFFAGRMVRAELYDQSLFDHNDFS 103
L+GRFF GR+VR +D+ F N+ +
Sbjct: 361 --LDGRFFGGRVVRGSYFDEERFARNELA 387
>gi|395507287|ref|XP_003757958.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
PUF60-like [Sarcophilus harrisii]
Length = 463
Score = 38.5 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 21/84 (25%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G V V I EKQ +++A E+IVKIFV F ++ EY
Sbjct: 400 FGAVNCVSICQEKQGEEDA-EIIVKIFVYFCIRXIGPHS------------EY------- 439
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
+FA + V AE+Y+Q FD +D S
Sbjct: 440 -WFADQKVVAEVYNQKRFDSSDLS 462
>gi|452823554|gb|EME30563.1| U2 snRNP auxiliary factor large subunit, putative isoform 2
[Galdieria sulphuraria]
Length = 538
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 15/75 (20%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V +V I ++D+ + K+FVSF + +AE A FA AL G
Sbjct: 471 YGEVTEVKIPRPSKTDEANPPGLGKVFVSFKTVSDAEKA--------FA-------ALTG 515
Query: 80 RFFAGRMVRAELYDQ 94
R F G+ V A YD+
Sbjct: 516 RRFGGKSVIANYYDE 530
>gi|116007460|ref|NP_001036426.1| Spf45, isoform A [Drosophila melanogaster]
gi|30923530|gb|EAA46008.1| Spf45, isoform A [Drosophila melanogaster]
gi|83270221|gb|ABB99954.1| RNA binding motif protein 17 [Drosophila melanogaster]
gi|201065519|gb|ACH92169.1| FI02801p [Drosophila melanogaster]
Length = 403
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 320 GDVDEELEPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKAVVD 376
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
LNGRFF GR VRA Y+ F
Sbjct: 377 LNGRFFG---------------GRQVRAGFYNYDKF 397
>gi|327286675|ref|XP_003228055.1| PREDICTED: HIV Tat-specific factor 1-like [Anolis carolinensis]
Length = 533
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
I + +S+ E +GQV+KV+I+ ++ D AS VSF + +EA+ + AL+GR+F
Sbjct: 373 IREDLRSECEKFGQVKKVIIF-DRHPDGVAS-------VSFKEAEEADVCKQALDGRWFG 424
Query: 69 EAEYARDALNG 79
+ + + +G
Sbjct: 425 GRQLSVETWDG 435
>gi|388579958|gb|EIM20277.1| hypothetical protein WALSEDRAFT_61086 [Wallemia sebi CBS 633.66]
Length = 432
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 47/116 (40%), Gaps = 31/116 (26%)
Query: 1 YGQVEKVVIYNEKQSDDEA--------------YGQVEKVVIYNEKQSDDEASEVIVKIF 46
YG+ K +I S DE G VE+VVI+ ++ +D VKI
Sbjct: 332 YGEPSKTIILRNMVSIDEVDNELSQEIAEECNKNGIVERVVIHTPREYNDPID--AVKIL 389
Query: 47 VSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
V FS L G + E LNGRFF G V+A Y + FD ++
Sbjct: 390 VKFS----------GLVGAYKNVRE-----LNGRFFGGSQVKARYYPDNAFDRGNY 430
>gi|443689872|gb|ELT92163.1| hypothetical protein CAPTEDRAFT_67241, partial [Capitella teleta]
Length = 185
Score = 38.1 bits (87), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E ++ +E YG+V K VI+ +E + V+IF+ F +M+ A L F
Sbjct: 91 EPETAEECAKYGKVIKCVIFEIPGVVEEEA---VRIFLQFERMEAAIKGILMLFLYFLCS 147
Query: 70 AEYARDA--LNGRFFAGRMVRAELYDQSLFDHNDFS 103
LNGRFF GR V+A Y+ F D +
Sbjct: 148 NSLLSAVVDLNGRFFGGRAVKAGFYNVDKFRQLDLA 183
>gi|195051308|ref|XP_001993070.1| GH13625 [Drosophila grimshawi]
gi|193900129|gb|EDV98995.1| GH13625 [Drosophila grimshawi]
Length = 451
Score = 38.1 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ ++ E VKIFV F +++ A A
Sbjct: 368 GDVDEELEPEVKDECNTKYGEVNSVIIH---EAFGTVPEDAVKIFVEFKRIESAIKA--- 421
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 422 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 445
>gi|353239145|emb|CCA71067.1| hypothetical protein PIIN_05002 [Piriformospora indica DSM 11827]
Length = 626
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 30/111 (27%)
Query: 1 YGQVEKVVIYN-----EKQSDD---------EAYGQVEKVVIYNEKQSDDEASEVIVKIF 46
YG+ ++V+ E DD +G VE+VV++ + D + V+IF
Sbjct: 523 YGESSRIVVLTNMVGPEDVDDDLQGEIGDECSKHGTVERVVVHLPYPTPDNPEDA-VRIF 581
Query: 47 VSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
V F+ A A A L+GRFF GR VRA+ +D+ F
Sbjct: 582 VQFAGP---------------AAAWKAVRELDGRFFGGRTVRAKYFDEGNF 617
>gi|90086107|dbj|BAE91606.1| unnamed protein product [Macaca fascicularis]
Length = 124
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 48 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA------------ 91
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFS 103
D LNGR+F GR+V+A Y+ F D +
Sbjct: 92 --VVD-LNGRYFGGRVVKACFYNLDKFRVLDLA 121
>gi|339252298|ref|XP_003371372.1| splicing factor 45 [Trichinella spiralis]
gi|316968403|gb|EFV52683.1| splicing factor 45 [Trichinella spiralis]
Length = 417
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
+ E Q + YG+V + ++ + D + V+IFV F+++++A A ALNGRF
Sbjct: 341 LQPEVQDEMLKYGEVRRCMVVEVPNASDVDA---VRIFVEFARVEQAIKAVVALNGRF-- 395
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLF 97
FAGR V A YD F
Sbjct: 396 -------------FAGRSVMASFYDPEKF 411
>gi|55742338|ref|NP_001006732.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|49523277|gb|AAH75485.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
gi|89268723|emb|CAJ82819.1| RNA binding motif protein 17 [Xenopus (Silurana) tropicalis]
Length = 399
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 20/92 (21%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGTPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
LNGR+F GR+V+A Y+ F D
Sbjct: 372 ------LNGRYFGGRIVKACFYNLDKFRTLDL 397
>gi|443690684|gb|ELT92746.1| hypothetical protein CAPTEDRAFT_28435, partial [Capitella teleta]
Length = 194
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 12 EKQSDDEA--YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAE 69
E ++ +E YG+V K VI+ +E + V+IF+ F +M+ A L F
Sbjct: 103 EPETAEECAKYGKVIKCVIFEIPGVVEEEA---VRIFLQFERMEAAIKGILMLFLYFLCS 159
Query: 70 AEYARDA--LNGRFFAGRMVRAELYDQSLFDHNDF 102
LNGRFF GR V+A Y+ F D
Sbjct: 160 NSLLSAVVDLNGRFFGGRAVKAGFYNVDKFRQLDL 194
>gi|170054316|ref|XP_001863072.1| splicing factor 45 [Culex quinquefasciatus]
gi|167874592|gb|EDS37975.1| splicing factor 45 [Culex quinquefasciatus]
Length = 399
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 38/83 (45%), Gaps = 18/83 (21%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V VVI NE + E V+IFV F +M+ A A D LNG
Sbjct: 334 YGDVITVVI-NE--IPNVVPEETVRIFVEFKRMESAIKA--------------VVD-LNG 375
Query: 80 RFFAGRMVRAELYDQSLFDHNDF 102
RFF GR VRA Y Q F+ +
Sbjct: 376 RFFGGRQVRAGFYSQEKFERMEL 398
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 37.7 bits (86), Expect = 0.94, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 23/89 (25%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAE 71
E +++ ++G VEKVVI NE S VK +V F RDA
Sbjct: 881 EIKNECSSFGAVEKVVITNEGTS--------VKAYVLF---------RDA------PSCA 917
Query: 72 YARDALNGRFFAGRMVRAELYDQSLFDHN 100
NGR+F+G +V+AE Y+ +LF +N
Sbjct: 918 MCLSKQNGRYFSGYLVKAEYYNVNLFLNN 946
>gi|67678022|gb|AAH97900.1| LOC733282 protein [Xenopus laevis]
Length = 281
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG+V K VI+ + DE + V+IF+ F +++ A A ++ L
Sbjct: 213 EKYGKVAKCVIFEIPGAPDEEA---VRIFLEFERVESAIKA--VVD-------------L 254
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
NGR+F GR+V+A Y+ F D
Sbjct: 255 NGRYFGGRIVKAGFYNLDKFRTLDLG 280
>gi|349604885|gb|AEQ00311.1| Splicing factor 45-like protein, partial [Equus caballus]
Length = 269
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 193 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 239
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 240 ------LNGRYFGGRVVKACFYNLDKF 260
>gi|118390069|ref|XP_001028025.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila]
gi|89309795|gb|EAS07783.1| U2 snRNP auxilliary factor, splicing factor [Tetrahymena
thermophila SB210]
Length = 480
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
+Y + ++ E G VEK+ I ++ I K+FV F M +A+ AR +LNGR +
Sbjct: 397 LYQDVMTECEKIGPVEKIEIPKPCKTTGICPPCIGKVFVKFKYMLKAKKARYSLNGRTYN 456
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
R V A Y + FD DF
Sbjct: 457 R---------------RTVIASFYPEDKFDRKDF 475
>gi|198473430|ref|XP_002133257.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
gi|198139453|gb|EDY70659.1| GA29081 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ ++ + E VKIFV F +++ A A
Sbjct: 335 GDVDEELEPEVKDECNTKYGEVNSVIIH---EAFGTSPEDAVKIFVEFKRIESAIKA--- 388
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 389 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 412
>gi|195164546|ref|XP_002023107.1| GL21138 [Drosophila persimilis]
gi|194105192|gb|EDW27235.1| GL21138 [Drosophila persimilis]
Length = 418
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ ++ + E VKIFV F +++ A A
Sbjct: 335 GDVDEELEPEVKDECNTKYGEVNSVIIH---EAFGTSPEDAVKIFVEFKRIESAIKA--- 388
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 389 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 412
>gi|147906402|ref|NP_001089093.1| RNA binding motif protein 17 [Xenopus laevis]
gi|112419030|gb|AAI22486.1| LOC733282 protein [Xenopus laevis]
Length = 400
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG+V K VI+ + DE + V+IF+ F +++ A A ++ L
Sbjct: 332 EKYGKVAKCVIFEIPGAPDEEA---VRIFLEFERVESAIKA--VVD-------------L 373
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDF 102
NGR+F GR+V+A Y+ F D
Sbjct: 374 NGRYFGGRIVKAGFYNLDKFRTLDL 398
>gi|281209343|gb|EFA83511.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 1109
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 32 KQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL-----NGRFFAGRM 86
K+ DD E I +SF ++++ DA F E A A NGR+F+G +
Sbjct: 1024 KEIDDFFEEEIKAECMSFGQVEKFVLTHDASVKAFILFKEPAACATCFNKQNGRYFSGYI 1083
Query: 87 VRAELYDQSLFDHND 101
V+AE YD SLF+ +
Sbjct: 1084 VKAEYYDISLFNKGN 1098
>gi|327272018|ref|XP_003220783.1| PREDICTED: splicing factor 45-like [Anolis carolinensis]
Length = 379
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 303 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 355
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 356 ------------GGRVVKACFYNLDKF 370
>gi|195433330|ref|XP_002064668.1| GK23713 [Drosophila willistoni]
gi|194160753|gb|EDW75654.1| GK23713 [Drosophila willistoni]
Length = 443
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ + E + VKIFV F +++ A A
Sbjct: 360 GDVDEELEPEVKDECNTKYGEVNSVIIHEAFGTTPEDA---VKIFVEFKRIESAIKA--- 413
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 414 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 437
>gi|401406015|ref|XP_003882457.1| GA11385, related [Neospora caninum Liverpool]
gi|325116872|emb|CBZ52425.1| GA11385, related [Neospora caninum Liverpool]
Length = 564
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 11 NEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
+E + + +G +++V ++ K + V+IFV FS + A R+A+
Sbjct: 494 DEVRDECSKFGGIKRVEVHTLKDT--------VRIFVEFSDLSGA---REAI-------- 534
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLFDHNDFSG 104
+L+GR+F GR + A YD+ LF ++
Sbjct: 535 ----PSLHGRWFGGRQIIANTYDEELFHQGEYEA 564
>gi|302832155|ref|XP_002947642.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
gi|300266990|gb|EFJ51175.1| hypothetical protein VOLCADRAFT_87981 [Volvox carteri f.
nagariensis]
Length = 441
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 16/84 (19%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ E + E V+IFV F + + A A A D L G
Sbjct: 367 YGKVLDVLIF-EVTTPGYVEEEAVRIFVQFERQESATKA--------------AVD-LQG 410
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
RFFAGR VR + + F D +
Sbjct: 411 RFFAGRSVRVSFFPEERFMATDLA 434
>gi|358339509|dbj|GAA27913.2| poly(U)-binding-splicing factor PUF60-B [Clonorchis sinensis]
Length = 512
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 15/60 (25%)
Query: 43 VKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
V+IFV F + A+ A ++LN RFFAGR+V A+LYD+ F ++F
Sbjct: 466 VRIFVHFDRSDSAQAACESLN---------------QRFFAGRVVHAKLYDEERFQLHEF 510
>gi|14290573|gb|AAH09064.1| RBM17 protein, partial [Homo sapiens]
Length = 369
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 293 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 339
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 340 ------LNGRYFGGRVVKACFYNLDKF 360
>gi|126340342|ref|XP_001362735.1| PREDICTED: splicing factor 45 isoform 2 [Monodelphis domestica]
gi|395538974|ref|XP_003771449.1| PREDICTED: splicing factor 45 [Sarcophilus harrisii]
Length = 401
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 20/90 (22%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFF 67
+ E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 322 LEGETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--------- 368
Query: 68 AEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGR+F GR+V+A Y+ F
Sbjct: 369 -----VVD-LNGRYFGGRVVKACFYNLDKF 392
>gi|302816055|ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
gi|300142484|gb|EFJ09184.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
Length = 421
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Query: 4 VEKVVIYNEKQSDDE-------------AYGQVEKVVIYNEKQSDDEASEVIVKIFVSFS 50
+++VV +E + DDE YG V +V+ K SD E + K+FV ++
Sbjct: 319 LKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPK-SDGEEVAGVGKVFVEYA 377
Query: 51 KMQEAEYARDALNGRFFA 68
++EA A+++LNGR F
Sbjct: 378 TIEEAIKAKNSLNGRKFG 395
>gi|194916573|ref|XP_001983016.1| GG11065 [Drosophila erecta]
gi|190647619|gb|EDV45013.1| GG11065 [Drosophila erecta]
Length = 200
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 40/85 (47%), Gaps = 21/85 (24%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG+V V+I+ +S E VKIFV F +++ A A
Sbjct: 124 EPEVKDECNTKYGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA---------- 170
Query: 69 EAEYARDALNGRFFAGRMVRAELYD 93
D LNGRFF GR VRA Y+
Sbjct: 171 ----VVD-LNGRFFGGRQVRAGFYN 190
>gi|355782616|gb|EHH64537.1| 45 kDa-splicing factor [Macaca fascicularis]
Length = 401
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|195385190|ref|XP_002051289.1| GJ13092 [Drosophila virilis]
gi|194147746|gb|EDW63444.1| GJ13092 [Drosophila virilis]
Length = 432
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ ++ E VKIFV F +++ A A
Sbjct: 349 GDVDEELEPEVKDECNTKYGEVNSVIIH---EAFGTVPEDAVKIFVEFKRIESAIKA--- 402
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 403 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 426
>gi|195116165|ref|XP_002002626.1| GI11727 [Drosophila mojavensis]
gi|193913201|gb|EDW12068.1| GI11727 [Drosophila mojavensis]
Length = 438
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 18/96 (18%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDA 61
G V++ + K + YG+V V+I+ ++ E VKIFV F +++ A A
Sbjct: 355 GDVDEELEPEVKDECNTKYGEVNSVIIH---EAFGTVPEDAVKIFVEFKRIESAIKA--- 408
Query: 62 LNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGRFF GR VRA Y+ F
Sbjct: 409 -----------VVD-LNGRFFGGRQVRAGFYNFDKF 432
>gi|350589637|ref|XP_003130870.3| PREDICTED: splicing factor 45 [Sus scrofa]
Length = 401
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|155371897|ref|NP_001094553.1| splicing factor 45 [Bos taurus]
gi|426240678|ref|XP_004014221.1| PREDICTED: splicing factor 45 [Ovis aries]
gi|154426050|gb|AAI51378.1| RBM17 protein [Bos taurus]
gi|296481516|tpg|DAA23631.1| TPA: RNA binding motif protein 17 [Bos taurus]
gi|440906277|gb|ELR56559.1| Splicing factor 45 [Bos grunniens mutus]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|61556823|ref|NP_001013076.1| splicing factor 45 [Rattus norvegicus]
gi|354465034|ref|XP_003494985.1| PREDICTED: splicing factor 45 [Cricetulus griseus]
gi|50927039|gb|AAH79248.1| RNA binding motif protein 17 [Rattus norvegicus]
gi|344238978|gb|EGV95081.1| Splicing factor 45 [Cricetulus griseus]
Length = 405
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 329 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 375
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 376 ------LNGRYFGGRVVKACFYNLDKF 396
>gi|431917634|gb|ELK16899.1| Splicing factor 45 [Pteropus alecto]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA------------ 368
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGR+F GR+V+A Y+ F
Sbjct: 369 --VVD-LNGRYFGGRVVKACFYNLDKF 392
>gi|348575588|ref|XP_003473570.1| PREDICTED: splicing factor 45 [Cavia porcellus]
Length = 386
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 310 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 356
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 357 ------LNGRYFGGRVVKACFYNLDKF 377
>gi|14249678|ref|NP_116294.1| splicing factor 45 [Homo sapiens]
gi|224549005|ref|NP_001139019.1| splicing factor 45 [Homo sapiens]
gi|383873015|ref|NP_001244661.1| splicing factor 45 [Macaca mulatta]
gi|114629220|ref|XP_001147496.1| PREDICTED: splicing factor 45 isoform 5 [Pan troglodytes]
gi|114629223|ref|XP_001147721.1| PREDICTED: splicing factor 45 isoform 7 [Pan troglodytes]
gi|297685979|ref|XP_002820545.1| PREDICTED: splicing factor 45 isoform 1 [Pongo abelii]
gi|297685981|ref|XP_002820546.1| PREDICTED: splicing factor 45 isoform 2 [Pongo abelii]
gi|332217040|ref|XP_003257661.1| PREDICTED: splicing factor 45 [Nomascus leucogenys]
gi|397515197|ref|XP_003827843.1| PREDICTED: splicing factor 45 [Pan paniscus]
gi|402879580|ref|XP_003903412.1| PREDICTED: splicing factor 45 isoform 1 [Papio anubis]
gi|402879582|ref|XP_003903413.1| PREDICTED: splicing factor 45 isoform 2 [Papio anubis]
gi|34925383|sp|Q96I25.1|SPF45_HUMAN RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|14043850|gb|AAH07871.1| RNA binding motif protein 17 [Homo sapiens]
gi|25058249|gb|AAH39322.1| RBM17 protein [Homo sapiens]
gi|33328180|gb|AAQ09533.1| unknown [Homo sapiens]
gi|119606811|gb|EAW86405.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|119606816|gb|EAW86410.1| RNA binding motif protein 17, isoform CRA_a [Homo sapiens]
gi|189067475|dbj|BAG37457.1| unnamed protein product [Homo sapiens]
gi|261861104|dbj|BAI47074.1| RNA binding motif protein 17 [synthetic construct]
gi|312152378|gb|ADQ32701.1| RNA binding motif protein 17 [synthetic construct]
gi|355562276|gb|EHH18870.1| 45 kDa-splicing factor [Macaca mulatta]
gi|380784085|gb|AFE63918.1| splicing factor 45 [Macaca mulatta]
gi|383414113|gb|AFH30270.1| splicing factor 45 [Macaca mulatta]
gi|410227696|gb|JAA11067.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410251468|gb|JAA13701.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410303376|gb|JAA30288.1| RNA binding motif protein 17 [Pan troglodytes]
gi|410336885|gb|JAA37389.1| RNA binding motif protein 17 [Pan troglodytes]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|417400279|gb|JAA47094.1| Putative mrna splicing factor [Desmodus rotundus]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA------------ 368
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGR+F GR+V+A Y+ F
Sbjct: 369 --VVD-LNGRYFGGRVVKACFYNLDKF 392
>gi|116007458|ref|NP_001036425.1| Spf45, isoform B [Drosophila melanogaster]
gi|46409150|gb|AAS93732.1| RE44883p [Drosophila melanogaster]
gi|51951006|gb|EAA46010.2| Spf45, isoform B [Drosophila melanogaster]
gi|220951092|gb|ACL88089.1| Spf45-PB [synthetic construct]
gi|220959676|gb|ACL92381.1| Spf45-PB [synthetic construct]
Length = 371
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 18/74 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ +S E VKIFV F +++ A A D LNG
Sbjct: 306 YGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--------------VVD-LNG 347
Query: 80 RFFAGRMVRAELYD 93
RFF GR VRA Y+
Sbjct: 348 RFFGGRQVRAGFYN 361
>gi|22779924|ref|NP_690037.1| splicing factor 45 [Mus musculus]
gi|34925312|sp|Q8JZX4.1|SPF45_MOUSE RecName: Full=Splicing factor 45; AltName: Full=45 kDa-splicing
factor; AltName: Full=RNA-binding motif protein 17
gi|3746840|gb|AAC64085.1| 45kDa splicing factor [Mus musculus]
gi|22028328|gb|AAH34896.1| RNA binding motif protein 17 [Mus musculus]
Length = 405
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 329 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 375
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 376 ------LNGRYFGGRVVKACFYNLDKF 396
>gi|344277716|ref|XP_003410644.1| PREDICTED: splicing factor 45 [Loxodonta africana]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|149743592|ref|XP_001500189.1| PREDICTED: splicing factor 45 isoform 1 [Equus caballus]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|351708186|gb|EHB11105.1| Splicing factor 45 [Heterocephalus glaber]
Length = 405
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 329 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 375
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 376 ------LNGRYFGGRVVKACFYNLDKF 396
>gi|73949102|ref|XP_849339.1| PREDICTED: splicing factor 45 isoform 2 [Canis lupus familiaris]
gi|301769963|ref|XP_002920393.1| PREDICTED: splicing factor 45-like [Ailuropoda melanoleuca]
gi|410963149|ref|XP_003988128.1| PREDICTED: splicing factor 45 [Felis catus]
gi|281347515|gb|EFB23099.1| hypothetical protein PANDA_009135 [Ailuropoda melanoleuca]
Length = 401
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|66809079|ref|XP_638262.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60466725|gb|EAL64776.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1035
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 23/83 (27%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G++EK+VI ++ QS VK+++ F +D +G + LNG
Sbjct: 975 FGEIEKLVIKSDSQS--------VKVYILF---------KDLYSGM------ACQSKLNG 1011
Query: 80 RFFAGRMVRAELYDQSLFDHNDF 102
++F+ ++AE YD LF+ + F
Sbjct: 1012 KYFSYHCIKAEFYDVHLFNKDVF 1034
>gi|432942100|ref|XP_004082959.1| PREDICTED: splicing factor 45-like [Oryzias latipes]
Length = 164
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ + DDEA V+IF+ F +++ A A
Sbjct: 88 ETKEECEKYGKVVKCVIFEIAEVPDDEA----VRIFLEFERVESAIKA------------ 131
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGR+F GR+V+A Y+ F
Sbjct: 132 --VVD-LNGRYFGGRVVKACFYNLDKF 155
>gi|116007456|ref|NP_001036424.1| Spf45, isoform C [Drosophila melanogaster]
gi|51951005|gb|EAA46009.2| Spf45, isoform C [Drosophila melanogaster]
Length = 363
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 18/74 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ +S E VKIFV F +++ A A D LNG
Sbjct: 298 YGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--------------VVD-LNG 339
Query: 80 RFFAGRMVRAELYD 93
RFF GR VRA Y+
Sbjct: 340 RFFGGRQVRAGFYN 353
>gi|296206115|ref|XP_002750072.1| PREDICTED: splicing factor 45 [Callithrix jacchus]
Length = 401
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|198437801|ref|XP_002129262.1| PREDICTED: similar to RNA binding motif protein 17 [Ciona
intestinalis]
Length = 378
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + YG V K +I+ ++DEA ++IF+ F +M+ A + ++
Sbjct: 301 ETKEECSKYGSVNKCLIFEMHGVTEDEA----IRIFIEFDRMESA--IKSLVD------- 347
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
+NGRFF GR V+A YD F
Sbjct: 348 ------MNGRFFGGRTVKASFYDVEKF 368
>gi|432089731|gb|ELK23548.1| Splicing factor 45 [Myotis davidii]
Length = 440
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 364 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 416
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 417 ------------GGRVVKACFYNLDKF 431
>gi|260809958|ref|XP_002599771.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
gi|229285053|gb|EEN55783.1| hypothetical protein BRAFLDRAFT_205776 [Branchiostoma floridae]
Length = 382
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 20/74 (27%)
Query: 20 YGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YG+V KVVI+ + +DEA V+IFV F +++ A A ++ LN
Sbjct: 314 YGKVNKVVIFEMPGRPEDEA----VRIFVEFDRLEAAIKA--VVD-------------LN 354
Query: 79 GRFFAGRMVRAELY 92
GR+F GR+V+ Y
Sbjct: 355 GRYFGGRLVKGAFY 368
>gi|296473885|tpg|DAA16000.1| TPA: RNA binding motif protein 17-like [Bos taurus]
Length = 401
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESA--------------I 366
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
+ D LNGR+F GR+V+A Y+ F
Sbjct: 367 KVVVD-LNGRYFGGRVVKACFYNLDKF 392
>gi|46409234|gb|AAS93774.1| AT25717p [Drosophila melanogaster]
Length = 363
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 18/74 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ +S E VKIFV F +++ A A D LNG
Sbjct: 298 YGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--------------VVD-LNG 339
Query: 80 RFFAGRMVRAELYD 93
RFF GR VRA Y+
Sbjct: 340 RFFGGRQVRAGFYN 353
>gi|302820212|ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
gi|300140455|gb|EFJ07178.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
Length = 420
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 14/78 (17%)
Query: 4 VEKVVIYNEKQSDDE-------------AYGQVEKVVIYNEKQSDDEASEVIVKIFVSFS 50
+++VV +E + DDE YG V +V+ K + +E + V K+FV ++
Sbjct: 318 LKQVVSPDELKEDDEYEEILEDMREECGKYGSVATLVLPRPKSNGEEVAGV-GKVFVEYA 376
Query: 51 KMQEAEYARDALNGRFFA 68
++EA A+++LNGR F
Sbjct: 377 TIEEAIKAKNSLNGRKFG 394
>gi|256073105|ref|XP_002572873.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 534
Score = 36.6 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 22/78 (28%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ D V+IF+ F + +A+ A ALN R+
Sbjct: 472 YGSVLRVLIHIMTSQD-------VRIFIQFDRSDDAKAACCALNQRY------------- 511
Query: 80 RFFAGRMVRAELYDQSLF 97
FAGR+V+A LYD+ F
Sbjct: 512 --FAGRVVQARLYDEERF 527
>gi|17946228|gb|AAL49154.1| RE57542p [Drosophila melanogaster]
gi|220948600|gb|ACL86843.1| Spf45-PC [synthetic construct]
gi|220958036|gb|ACL91561.1| Spf45-PC [synthetic construct]
Length = 379
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 18/74 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V V+I+ +S E VKIFV F +++ A A D LNG
Sbjct: 314 YGEVNSVIIH---ESFGTVPEDAVKIFVEFRRIESAIKA--------------VVD-LNG 355
Query: 80 RFFAGRMVRAELYD 93
RFF GR VRA Y+
Sbjct: 356 RFFGGRQVRAGFYN 369
>gi|148666907|gb|EDK99323.1| mCG1036453 [Mus musculus]
Length = 358
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 282 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 328
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 329 ------LNGRYFGGRVVKACFYNLDKF 349
>gi|350646433|emb|CCD58930.1| fuse-binding protein-interacting repressor siahbp1, putative
[Schistosoma mansoni]
Length = 522
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 22/78 (28%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ D V+IF+ F + +A+ A ALN R+
Sbjct: 460 YGSVLRVLIHIMTSQD-------VRIFIQFDRSDDAKAACCALNQRY------------- 499
Query: 80 RFFAGRMVRAELYDQSLF 97
FAGR+V+A LYD+ F
Sbjct: 500 --FAGRVVQARLYDEERF 515
>gi|383125816|gb|AFG43490.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125818|gb|AFG43491.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125820|gb|AFG43492.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125822|gb|AFG43493.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125824|gb|AFG43494.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125826|gb|AFG43495.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125828|gb|AFG43496.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125830|gb|AFG43497.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125832|gb|AFG43498.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125834|gb|AFG43499.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
gi|383125836|gb|AFG43500.1| Pinus taeda anonymous locus 2_3207_01 genomic sequence
Length = 93
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
IY++ + + +G++ K+VI K + +E V K+FV ++ Q + AR +L+GR F
Sbjct: 16 IYDDMKEECGKHGEITKLVIPRPKSTGEEVPGV-GKVFVEYANTQSSAKARASLHGRKFG 74
>gi|66516089|ref|XP_393194.2| PREDICTED: splicing factor 45-like [Apis mellifera]
gi|380028015|ref|XP_003697707.1| PREDICTED: splicing factor 45-like [Apis florea]
Length = 381
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ ++ A E V+IFV F +++ A A ++ LNG
Sbjct: 315 YGDVARVIIHEVTEA---APEEAVRIFVEFKRIESAIKA--VVD-------------LNG 356
Query: 80 RFFAGRMVRAELYDQSLFD 98
RFF GR V+A Y D
Sbjct: 357 RFFGGRQVKAGFYSSEKLD 375
>gi|449266291|gb|EMC77359.1| Splicing factor 45 [Columba livia]
Length = 401
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 377
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 378 ------------GGRVVKACFYNLDKF 392
>gi|50729326|ref|XP_416473.1| PREDICTED: splicing factor 45 [Gallus gallus]
Length = 402
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 326 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 378
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 379 ------------GGRVVKACFYNLDKF 393
>gi|224092741|ref|XP_002189506.1| PREDICTED: splicing factor 45 [Taeniopygia guttata]
Length = 401
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 377
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 378 ------------GGRVVKACFYNLDKF 392
>gi|350399021|ref|XP_003485388.1| PREDICTED: splicing factor 45-like [Bombus impatiens]
Length = 383
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + A E V+IFV F +++ A A D LNG
Sbjct: 317 YGDVARVIIH---EVTEAAPEEAVRIFVEFKRIESAIKA--------------VVD-LNG 358
Query: 80 RFFAGRMVRAELYDQSLFD 98
RFF GR V+A Y D
Sbjct: 359 RFFGGRQVKAGFYSSEKLD 377
>gi|340719031|ref|XP_003397961.1| PREDICTED: splicing factor 45-like [Bombus terrestris]
Length = 382
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 18/79 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + A E V+IFV F +++ A A D LNG
Sbjct: 316 YGDVARVIIH---EVTEAAPEEAVRIFVEFKRIESAIKA--------------VVD-LNG 357
Query: 80 RFFAGRMVRAELYDQSLFD 98
RFF GR V+A Y D
Sbjct: 358 RFFGGRQVKAGFYSSEKLD 376
>gi|326911058|ref|XP_003201879.1| PREDICTED: splicing factor 45-like [Meleagris gallopavo]
Length = 402
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 326 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 378
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 379 ------------GGRVVKACFYNLDKF 393
>gi|149436980|ref|XP_001510396.1| PREDICTED: splicing factor 45 isoform 2 [Ornithorhynchus anatinus]
Length = 401
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 377
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 378 ------------GGRVVKACFYNLDKF 392
>gi|403296380|ref|XP_003939089.1| PREDICTED: splicing factor 45 [Saimiri boliviensis boliviensis]
Length = 401
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 20/82 (24%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELY 92
LNGR+F GR+V+A Y
Sbjct: 372 ------LNGRYFGGRVVKACFY 387
>gi|383858690|ref|XP_003704832.1| PREDICTED: splicing factor 45-like [Megachile rotundata]
Length = 382
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + A E V+IFV F +++ A A ++ LNG
Sbjct: 316 YGDVARVIIH---EVTEAAPEEAVRIFVEFKRIESAIKA--VVD-------------LNG 357
Query: 80 RFFAGRMVRAELYDQSLFD 98
RFF GR V+A Y D
Sbjct: 358 RFFGGRQVKAGFYSSEKLD 376
>gi|348536528|ref|XP_003455748.1| PREDICTED: splicing factor 45-like [Oreochromis niloticus]
Length = 403
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 20/90 (22%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFF 67
+ E + + E YG+V K VI+ + DDEA V+IF+ F +++ A A
Sbjct: 324 LEGETKEECEKYGKVVKCVIFEIAEVPDDEA----VRIFLEFERVESAIKA--------- 370
Query: 68 AEAEYARDALNGRFFAGRMVRAELYDQSLF 97
D LNGR+F GR+V+A Y+ F
Sbjct: 371 -----VVD-LNGRYFGGRVVKACFYNLDKF 394
>gi|395827373|ref|XP_003786879.1| PREDICTED: splicing factor 45 [Otolemur garnettii]
Length = 401
Score = 36.2 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 325 ETKEECEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYF--- 377
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
GR+V+A Y+ F
Sbjct: 378 ------------GGRVVKACFYNLDKF 392
>gi|134106515|ref|XP_778268.1| hypothetical protein CNBA2680 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260971|gb|EAL23621.1| hypothetical protein CNBA2680 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 624
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 2 GQVEKV--VIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYAR 59
G VE++ + NE + YG VE+VV++ + E E + ++FV FS M
Sbjct: 531 GSVEEIDEELVNEIGEECSNYGIVERVVLHLVEPPPPEPEECL-RVFVVFSGM------- 582
Query: 60 DALNGRFFAEAEYARDALNGRFFAGRMV--RAELYDQSLFDHNDFSG 104
A A A L+GRFF GR + +A +D++ FD D G
Sbjct: 583 --------AGAWRAIKELDGRFFGGRNINQKATYFDETRFDKGDRDG 621
>gi|53131339|emb|CAG31810.1| hypothetical protein RCJMB04_11k6 [Gallus gallus]
Length = 450
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 27/93 (29%)
Query: 5 EKVVIYNEKQSD----DEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARD 60
E ++ NE + D E +GQV+KV+I++ + D AS VSF + EA+ +
Sbjct: 281 EDPLVLNEIREDLRTECEKFGQVKKVLIFD-RHPDGVAS-------VSFKEATEADLCKL 332
Query: 61 ALNGRFFAEAEYARDALNGRFFAGRMVRAELYD 93
LNGR+ F GR + AE +D
Sbjct: 333 TLNGRW---------------FGGRQLSAETWD 350
>gi|118089467|ref|XP_001233032.1| PREDICTED: HIV Tat-specific factor 1 homolog [Gallus gallus]
Length = 450
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 27/93 (29%)
Query: 5 EKVVIYNEKQSD----DEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARD 60
E ++ NE + D E +GQV+KV+I++ + D AS VSF + EA+ +
Sbjct: 281 EDPLVLNEIREDLRTECEKFGQVKKVLIFD-RHPDGVAS-------VSFKEATEADLCKL 332
Query: 61 ALNGRFFAEAEYARDALNGRFFAGRMVRAELYD 93
LNGR+ F GR + AE +D
Sbjct: 333 TLNGRW---------------FGGRQLSAETWD 350
>gi|389612784|dbj|BAM19802.1| conserved hypothetical protein, partial [Papilio xuthus]
Length = 396
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 20/92 (21%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIYNEKQS-DDEASEVIVKIFVSFSKMQEAEYARD 60
G V++ + K + YG V KVVI+ + +DEA V+IFV F +++
Sbjct: 314 GDVDEELEPEVKDECNTKYGDVIKVVIFEMPNAPNDEA----VRIFVEFKRIE------- 362
Query: 61 ALNGRFFAEAEYARDALNGRFFAGRMVRAELY 92
A A LNGRFF GR V+A Y
Sbjct: 363 --------SAIKAVVDLNGRFFGGRQVKAGFY 386
>gi|322800820|gb|EFZ21695.1| hypothetical protein SINV_12429 [Solenopsis invicta]
Length = 242
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 21/91 (23%)
Query: 12 EKQSDDEA---YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + DE YG V +V+I+ ++ E + V+IFV F +++ A A
Sbjct: 165 EPEVKDECNTKYGDVARVIIHEVIEATPEEA---VRIFVEFKRIESAIKA---------- 211
Query: 69 EAEYARDALNGRFFAGRMVRAELYDQSLFDH 99
D LNGRFF GR V+A Y D+
Sbjct: 212 ----VVD-LNGRFFGGRQVKAGFYSSEKLDN 237
>gi|343958878|dbj|BAK63294.1| splicing factor 45 [Pan troglodytes]
Length = 401
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIY-NEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFETPGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+ Y+ F
Sbjct: 372 ------LNGRYFGGRVVKVCFYNLDKF 392
>gi|307184500|gb|EFN70889.1| Splicing factor 45 [Camponotus floridanus]
Length = 380
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 18/80 (22%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG V +V+I+ + + A E V+IFV F +++ A A D LNG
Sbjct: 314 YGDVARVIIH---EVIEAAPEEAVRIFVEFKRIESAIKA--------------VVD-LNG 355
Query: 80 RFFAGRMVRAELYDQSLFDH 99
RFF GR V+A Y D+
Sbjct: 356 RFFGGRQVKAGFYSSEKLDN 375
>gi|291236494|ref|XP_002738177.1| PREDICTED: RNA binding motif protein 17-like [Saccoglossus
kowalevskii]
Length = 519
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 20/85 (23%)
Query: 20 YGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YG+V +V+I+ + DEA V+IFV F +++ A A LNGR+F
Sbjct: 452 YGKVTRVLIFEIPGGAPDEA----VRIFVEFERLESAIKAVVDLNGRYF----------- 496
Query: 79 GRFFAGRMVRAELYDQSLFDHNDFS 103
GR V+A +D F D +
Sbjct: 497 ----GGRTVKAGFFDPDRFKRYDLA 517
>gi|149731824|ref|XP_001494792.1| PREDICTED: splicing factor 45-like [Equus caballus]
Length = 401
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V K VI+ DDEA V+IF+ F +++ A A ++
Sbjct: 325 ETKEECEKYGKVGKCVIFEILGAPDDEA----VRIFLEFERVESAIKA--VVD------- 371
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 372 ------LNGRYFGGRVVKACFYNLDKF 392
>gi|387193280|gb|AFJ68695.1| splicing factor U2AF 65 kDa subunit [Nannochloropsis gaditana
CCMP526]
Length = 424
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G+V +VI ++ S + KIFV EYA + + + A +L G
Sbjct: 356 FGEVLSLVIPRPEEPSAPPSPAVGKIFV--------EYAESS-------QTKAAAQSLQG 400
Query: 80 RFFAGRMVRAELYDQSLFDHNDFS 103
R FAGR+V+A YD+ F + +
Sbjct: 401 RRFAGRIVQASFYDEEKFKRQELA 424
>gi|41055474|ref|NP_957209.1| splicing factor 45 [Danio rerio]
gi|28278930|gb|AAH45473.1| RNA binding motif protein 17 [Danio rerio]
gi|182890562|gb|AAI64722.1| Rbm17 protein [Danio rerio]
Length = 418
Score = 35.0 bits (79), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 20/87 (22%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEA 70
E + + E YG+V + VI+ +DDEA V+IF+ F +++ A A ++
Sbjct: 342 ETKEECEKYGKVVRCVIFEISGVTDDEA----VRIFLEFERVESAIKA--VVD------- 388
Query: 71 EYARDALNGRFFAGRMVRAELYDQSLF 97
LNGR+F GR+V+A Y+ F
Sbjct: 389 ------LNGRYFGGRVVKACFYNLDRF 409
>gi|453080357|gb|EMF08408.1| hypothetical protein SEPMUDRAFT_152084 [Mycosphaerella populorum
SO2202]
Length = 664
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 21/86 (24%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
+ YGQVE++ I+ +K D EV VK S ++ +
Sbjct: 598 QEYGQVERLYIWQKK--DGGNGEVFVKFTSPLSAVR-------------------CMKGM 636
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDFS 103
G FAG V+AE +D +LF+ +S
Sbjct: 637 GGTLFAGNEVKAEYWDAALFEEGKYS 662
>gi|339522017|gb|AEJ84173.1| RNA-binding motif protein 17 [Capra hircus]
Length = 401
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 12 EKQSDDEAYGQVEKVVIYN-EKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
E + E YG+V K VI+ DDEA V+IF+ F +++ A A LNGR+F
Sbjct: 325 ETKEGCEKYGKVGKCVIFEIPGAPDDEA----VRIFLEFERVESAIKAVVDLNGRYFG 378
>gi|346472937|gb|AEO36313.1| hypothetical protein [Amblyomma maculatum]
Length = 419
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G+V+KVV+Y D E + I +F + +EA+ +NGR+FA+ + + + +G
Sbjct: 290 FGEVKKVVVY------DRNPEGVATI--TFKEPEEADACISRMNGRWFAQRQLSAETWDG 341
Query: 80 R 80
R
Sbjct: 342 R 342
>gi|334311921|ref|XP_001368201.2| PREDICTED: HIV Tat-specific factor 1-like [Monodelphis domestica]
Length = 555
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 23/85 (27%)
Query: 9 IYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFA 68
I + +S+ E +GQV+KV++++ + D AS VS+ + +EA+ ALNGR
Sbjct: 399 IREDLRSECEKFGQVKKVLVFD-RHPDGVAS-------VSYKEPEEADLCIQALNGR--- 447
Query: 69 EAEYARDALNGRFFAGRMVRAELYD 93
+F GR + E++D
Sbjct: 448 ------------WFGGRQLNVEVWD 460
>gi|41055136|ref|NP_957497.1| HIV TAT specific factor 1 [Danio rerio]
gi|33417205|gb|AAH55565.1| HIV TAT specific factor 1 [Danio rerio]
Length = 450
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 23/76 (30%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E +GQV+KV+I++ + D AS V+F + +EA+ + ALNGR+
Sbjct: 300 EKFGQVKKVIIFD-RHPDGVAS-------VAFKEPEEADACQVALNGRW----------- 340
Query: 78 NGRFFAGRMVRAELYD 93
F GR + A L+D
Sbjct: 341 ----FGGRKLSALLWD 352
>gi|345563187|gb|EGX46190.1| hypothetical protein AOL_s00110g14 [Arthrobotrys oligospora ATCC
24927]
Length = 537
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG++E+V I + KQS+D S K+FV F+ A A +AL GR F + +
Sbjct: 472 EKYGRIERVHIIH-KQSEDAPS----KVFVQFTSQLSALRAVNALEGRMFNG-----NTI 521
Query: 78 NGRFF 82
RFF
Sbjct: 522 EARFF 526
>gi|427785711|gb|JAA58307.1| Putative transcription elongation factor tat-sf1 [Rhipicephalus
pulchellus]
Length = 419
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
+G+V+KVV+Y D E + V+F + +EA+ +NGR+FA+ + + + +G
Sbjct: 291 FGEVKKVVVY------DRHPEGVAT--VTFKEPEEADACISRMNGRWFAQRQLSAETWDG 342
Query: 80 R 80
R
Sbjct: 343 R 343
>gi|242015516|ref|XP_002428399.1| Splicing factor, putative [Pediculus humanus corporis]
gi|212513011|gb|EEB15661.1| Splicing factor, putative [Pediculus humanus corporis]
Length = 402
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 18/73 (24%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALNG 79
YG+V KV+I+ + D + ++IFV F +++ A A D LNG
Sbjct: 336 YGEVIKVLIF---EMPDAPQDEAIRIFVEFKRIESAIKA--------------VVD-LNG 377
Query: 80 RFFAGRMVRAELY 92
RFF GR V+A Y
Sbjct: 378 RFFGGRQVKAGFY 390
>gi|147904178|ref|NP_001087532.1| MGC84102 protein [Xenopus laevis]
gi|76779457|gb|AAI06250.1| MGC84102 protein [Xenopus laevis]
Length = 400
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG+V + VI+ + +E + V+IF+ F +++ A A ++ L
Sbjct: 332 EKYGKVGRCVIFEIPGAPEEEA---VRIFLEFERVESAIKA--VVD-------------L 373
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDF 102
NGR+F GR+V+A Y+ F D
Sbjct: 374 NGRYFGGRIVKASFYNLDKFRTLDL 398
>gi|170086047|ref|XP_001874247.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651799|gb|EDR16039.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1243
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 4 VEKVVIYNEKQSDDEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQE 54
+ ++V+Y+ D EA+ + K+V Q++DEAS+V ++FV FS+ E
Sbjct: 821 IPQLVLYSRVSKDLEAWMEKSKIVF---AQAEDEASKVTPELFVEFSRADE 868
>gi|51261675|gb|AAH80073.1| MGC84102 protein [Xenopus laevis]
Length = 400
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 18 EAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDAL 77
E YG+V + VI+ + +E + V+IF+ F +++ A A ++ L
Sbjct: 332 EKYGKVGRCVIFEIPGAPEEEA---VRIFLEFERVESAIKA--VVD-------------L 373
Query: 78 NGRFFAGRMVRAELYDQSLFDHNDF 102
NGR+F GR+V+A Y+ F D
Sbjct: 374 NGRYFGGRIVKASFYNLDKFRTLDL 398
>gi|296411000|ref|XP_002835223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295627998|emb|CAZ79344.1| unnamed protein product [Tuber melanosporum]
Length = 546
Score = 34.7 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVVIY---NEKQSDDEASEVIVKIFVSFSKMQEAEYA 58
G+ E V++ + +YG VE+V++ ++ + D+ + ++FV FS A A
Sbjct: 457 GEDEAVLMQEIGDECENSYGGVERVLVVWGKDDGEGDNAGEKAASRVFVKFSGELAALRA 516
Query: 59 RDALNGRFFAEAEYARDALNGRFFAGRMVRAELYDQSLFDHNDF 102
+AL GR F G + A +D+ F+ +F
Sbjct: 517 VNAL---------------EGRLFNGNTIEARFFDKDKFEDREF 545
>gi|345306681|ref|XP_001514214.2| PREDICTED: HIV Tat-specific factor 1 homolog [Ornithorhynchus
anatinus]
Length = 439
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 12/79 (15%)
Query: 5 EKVVIYNEKQSD----DEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARD 60
E ++ NE + D E +GQV+KV++++ + D AS VS+ + EA+
Sbjct: 267 EDPLVLNEIREDLRTECEKFGQVKKVLLFD-RHPDGVAS-------VSYKEADEADLCIQ 318
Query: 61 ALNGRFFAEAEYARDALNG 79
ALNGR+F + + +A +G
Sbjct: 319 ALNGRWFGGRQLSVEAWDG 337
>gi|212528524|ref|XP_002144419.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
marneffei ATCC 18224]
gi|210073817|gb|EEA27904.1| G-patch DNA repair protein (Drt111), putative [Talaromyces
marneffei ATCC 18224]
Length = 544
Score = 34.7 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 22/82 (26%)
Query: 17 DEAYGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDA 76
+E YG+VEKV I+ E +E V VK S ++ A +A
Sbjct: 480 NEKYGRVEKVFIHRES---NEPVPVFVKFTAQLSALR-------------------AVNA 517
Query: 77 LNGRFFAGRMVRAELYDQSLFD 98
L GR F G + A YD FD
Sbjct: 518 LEGRIFNGNKITARFYDTEKFD 539
>gi|410919059|ref|XP_003973002.1| PREDICTED: splicing factor 45-like isoform 1 [Takifugu rubripes]
Length = 403
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 20/79 (25%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YG+V K VI+ + DDEA V+IF+ F +++ A A ++ LN
Sbjct: 335 YGKVVKCVIFEIAEVPDDEA----VRIFLEFERVESAIKA--VVD-------------LN 375
Query: 79 GRFFAGRMVRAELYDQSLF 97
GR+F GR+V+A Y+ F
Sbjct: 376 GRYFGGRVVKACFYNLDKF 394
>gi|310799532|gb|EFQ34425.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 782
Score = 34.3 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 20 YGQVEKVVIYNEKQSDDEASEVIVKIFVSFSKMQEAEYARDALNG 64
YG ++K+ I N K SD + S + I+V+F K ++A+ A+NG
Sbjct: 150 YGNIQKISISNRKTSDGQNS---LGIYVTFEKKEDAQRCIQAVNG 191
>gi|410919061|ref|XP_003973003.1| PREDICTED: splicing factor 45-like isoform 2 [Takifugu rubripes]
Length = 417
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 20/79 (25%)
Query: 20 YGQVEKVVIYNEKQ-SDDEASEVIVKIFVSFSKMQEAEYARDALNGRFFAEAEYARDALN 78
YG+V K VI+ + DDEA V+IF+ F +++ A A ++ LN
Sbjct: 349 YGKVVKCVIFEIAEVPDDEA----VRIFLEFERVESAIKA--VVD-------------LN 389
Query: 79 GRFFAGRMVRAELYDQSLF 97
GR+F GR+V+A Y+ F
Sbjct: 390 GRYFGGRVVKACFYNLDKF 408
>gi|374585341|ref|ZP_09658433.1| Alcohol dehydrogenase zinc-binding domain protein [Leptonema illini
DSM 21528]
gi|373874202|gb|EHQ06196.1| Alcohol dehydrogenase zinc-binding domain protein [Leptonema illini
DSM 21528]
Length = 350
Score = 34.3 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 2 GQVEKVVIYNEKQSDDEAYGQVEKVV-IYNEKQSDDEASEVIVKIFVSFSKMQEAEYARD 60
GQ KV+ Y + E YG ++ V + +EK++D++ EV++++ S EA + R
Sbjct: 19 GQTMKVLAY-KTYGGPEVYGVEDRPVPVLSEKKADEKGGEVLIRVHYSTVTATEAVFRRG 77
Query: 61 ALNGRFFAEAEYARDALNGRFFAGRMV--RAELYDQ 94
+ R F + + G AG +V R+E + +
Sbjct: 78 DMMARLFTGLFRPKMQVLGEELAGTVVGSRSERFKE 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,490,614,511
Number of Sequences: 23463169
Number of extensions: 50145966
Number of successful extensions: 139289
Number of sequences better than 100.0: 363
Number of HSP's better than 100.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 138436
Number of HSP's gapped (non-prelim): 618
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)