BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2137
(382 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BTC8|MTA3_HUMAN Metastasis-associated protein MTA3 OS=Homo sapiens GN=MTA3 PE=1
SV=2
Length = 594
Score = 265 bits (678), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 127/158 (80%), Positives = 136/158 (86%), Gaps = 4/158 (2%)
Query: 95 TFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLC 154
TFARALDCSSSV+QPSLHMSAAAASRDITLFHAMDTL +H Y L+ AIS LVP GPVLC
Sbjct: 205 TFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHSYDLSSAISVLVPLGGPVLC 264
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKR 214
RDEMEEWSASEA+LFEEALEKYGKDFNDIR DFLPWK+L +IIEYYYMWKTTDRYVQQKR
Sbjct: 265 RDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 324
Query: 215 VKAVEAESKLKQVYIPNYNKPPQGSAAT----PGVVNN 248
+KA EAESKLKQVYIP Y+KP +T PG VN
Sbjct: 325 LKAAEAESKLKQVYIPTYSKPNPNQISTSNGKPGAVNG 362
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 283 DELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVW 342
D+ DTFFY LV+DP+ KTLLADKGEIRVG +YQ+DI L E D RE E VW
Sbjct: 125 DKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDE--REQSKLEVKVW 182
Query: 343 TPHHSLTDKQIDQFLVISRSVGKF 366
P+ LTD+QIDQFLV++R+VG F
Sbjct: 183 DPNSPLTDRQIDQFLVVARAVGTF 206
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
+LT+KQKHQLK RELFLSRQ E+LPATHIRGKCSV LLNETES+LSYL+KE
Sbjct: 77 DLTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKE 127
>sp|Q8K4B0|MTA1_MOUSE Metastasis-associated protein MTA1 OS=Mus musculus GN=Mta1 PE=1
SV=1
Length = 715
Score = 264 bits (675), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 127/163 (77%), Positives = 139/163 (85%), Gaps = 11/163 (6%)
Query: 94 STFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVL 153
TFARALDCSSSV+QPSLHMSAAAASRDITLFHAMDTL K+ Y +++AIS+LVP GPVL
Sbjct: 221 GTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVL 280
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQK 213
CRDEMEEWSASEANLFEEALEKYGKDF DI+ DFLPWK+L +IIEYYYMWKTTDRYVQQK
Sbjct: 281 CRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQK 340
Query: 214 RVKAVEAESKLKQVYIPNYNKPPQGSAATPGVVNNNKLSTSGV 256
R+KA EAESKLKQVYIPNYNKP N N++S S V
Sbjct: 341 RLKAAEAESKLKQVYIPNYNKP-----------NPNQISASSV 372
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 286 DTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPH 345
D FFY LV+DP QKTLLADKGEIRVG++YQ+DIT L E +D R+ ET VW H
Sbjct: 145 DFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKEGEED--GRDQSKLETKVWEAH 202
Query: 346 HSLTDKQIDQFLVISRSVGKFQES 369
+ L DKQIDQFLV++RSVG F +
Sbjct: 203 NPLVDKQIDQFLVVARSVGTFARA 226
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
+L K KHQL+ RELFLSRQ+E+LPATHIRGKCSVTLLNETESL SYL +E
Sbjct: 94 DLPEKLKHQLRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLERE 144
>sp|Q13330|MTA1_HUMAN Metastasis-associated protein MTA1 OS=Homo sapiens GN=MTA1 PE=1
SV=2
Length = 715
Score = 263 bits (673), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/164 (78%), Positives = 141/164 (85%), Gaps = 7/164 (4%)
Query: 94 STFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVL 153
TFARALDCSSSV+QPSLHMSAAAASRDITLFHAMDTL K+ Y +++AIS+LVP GPVL
Sbjct: 221 GTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVL 280
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQK 213
CRDEMEEWSASEANLFEEALEKYGKDF DI+ DFLPWK+L +IIEYYYMWKTTDRYVQQK
Sbjct: 281 CRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQK 340
Query: 214 RVKAVEAESKLKQVYIPNYNKPPQGSAATPGVVNNNKLSTSGVV 257
R+KA EAESKLKQVYIPNYNKP + VNN K +GVV
Sbjct: 341 RLKAAEAESKLKQVYIPNYNKPNPNQIS----VNNVK---AGVV 377
Score = 108 bits (269), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/84 (61%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
Query: 286 DTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPH 345
D FFY LV+DP QKTLLADKGEIRVG++YQ+DIT L E +D R+ ET VW H
Sbjct: 145 DFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKEGEED--GRDQSRLETQVWEAH 202
Query: 346 HSLTDKQIDQFLVISRSVGKFQES 369
+ LTDKQIDQFLV++RSVG F +
Sbjct: 203 NPLTDKQIDQFLVVARSVGTFARA 226
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
+L K KHQL+ RELFLSRQ+E+LPATHIRGKCSVTLLNETESL SYL +E
Sbjct: 94 DLPEKLKHQLRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLERE 144
>sp|Q62599|MTA1_RAT Metastasis-associated protein MTA1 OS=Rattus norvegicus GN=Mta1
PE=1 SV=1
Length = 703
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/142 (85%), Positives = 132/142 (92%)
Query: 94 STFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVL 153
TFARALDCSSSV+QPSLHMSAAAASRDITLFHAMDTL K+ Y +++AIS+LVP GPVL
Sbjct: 221 GTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHKNIYDISKAISALVPQGGPVL 280
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQK 213
CRDEMEEWSASEANLFEEALEKYGKDF DI+ DFLPWK+L +IIEYYYMWKTTDRYVQQK
Sbjct: 281 CRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFLPWKSLTSIIEYYYMWKTTDRYVQQK 340
Query: 214 RVKAVEAESKLKQVYIPNYNKP 235
R+KA EAESKLKQVYIPNYNKP
Sbjct: 341 RLKAAEAESKLKQVYIPNYNKP 362
Score = 105 bits (261), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Query: 286 DTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPH 345
D FFY LV+DP QKTLLADKGEIRVG++YQ+DIT L + +D R+ ET VW H
Sbjct: 145 DFFFYSLVYDPQQKTLLADKGEIRVGNRYQADITDLLKDGEED--GRDQSKLETKVWEAH 202
Query: 346 HSLTDKQIDQFLVISRSVGKFQES 369
+ L DKQIDQFLV++RSVG F +
Sbjct: 203 NPLVDKQIDQFLVVARSVGTFARA 226
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 45/51 (88%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
+L K KHQL+ RELFLSRQ+E+LPATHIRGKCSVTLLNETESL SYL +E
Sbjct: 94 DLPEKLKHQLRHRELFLSRQLESLPATHIRGKCSVTLLNETESLKSYLERE 144
>sp|A6QL72|MTA3_BOVIN Metastasis-associated protein MTA3 OS=Bos taurus GN=MTA3 PE=2 SV=1
Length = 590
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 133/157 (84%), Gaps = 3/157 (1%)
Query: 95 TFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLC 154
TFARALDCSSSV+QPSLHMSAAAASRDITLFH+MDTL +H Y L+ AIS LVP GPVLC
Sbjct: 205 TFARALDCSSSVRQPSLHMSAAAASRDITLFHSMDTLYRHGYDLSSAISVLVPLGGPVLC 264
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKR 214
RDEMEEWSASEA+LFEEALEKYGKDFNDIR DFLPWK+L +IIEYYYMWKTTDRYVQQKR
Sbjct: 265 RDEMEEWSASEASLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 324
Query: 215 VKAVEAESKLKQVYIPNYNKPPQ---GSAATPGVVNN 248
+KA EAESKLKQVYIP Y P S PG VN
Sbjct: 325 LKAAEAESKLKQVYIPTYKPNPNQISTSNGKPGAVNG 361
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 60/84 (71%), Gaps = 2/84 (2%)
Query: 283 DELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVW 342
D+ DTFFY LV+DP+ KTLLADKGEIRVG +YQ+DI L E D RE E VW
Sbjct: 125 DKEDTFFYSLVYDPSVKTLLADKGEIRVGPRYQADIPEMLLEGESDE--REQSKLEVKVW 182
Query: 343 TPHHSLTDKQIDQFLVISRSVGKF 366
P+ LTD+QIDQFLV++R+VG F
Sbjct: 183 DPNSPLTDRQIDQFLVVARAVGTF 206
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKEPRSFVVSL 92
+LT+KQKHQLK RELFLSRQ E+LPATHIRGKCSV LLNETES+LSYL+KE +F SL
Sbjct: 77 DLTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKE-DTFFYSL 134
>sp|Q924K8|MTA3_MOUSE Metastasis-associated protein MTA3 OS=Mus musculus GN=Mta3 PE=1
SV=1
Length = 591
Score = 258 bits (658), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 125/157 (79%), Positives = 131/157 (83%), Gaps = 3/157 (1%)
Query: 95 TFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLC 154
TFARALDCSSSV+QPSLHMSAAAASRDITLFHAMDTL +H Y L+ AIS LVP GPVLC
Sbjct: 204 TFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLYRHGYDLSSAISVLVPLGGPVLC 263
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKR 214
RDEMEEWSASEA LFEEALEKYGKDFNDIR DFLPWK+L +IIEYYYMWKTTDRYVQQKR
Sbjct: 264 RDEMEEWSASEACLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKR 323
Query: 215 VKAVEAESKLKQVYIPNYNKPPQ---GSAATPGVVNN 248
+KA EAESKLKQVYIP Y P S G VN
Sbjct: 324 LKAAEAESKLKQVYIPTYKPNPNQISSSNGKAGTVNG 360
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 61/84 (72%), Gaps = 3/84 (3%)
Query: 283 DELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVW 342
D+ DTFFY LV+DP+ KTLLADKGEIRVG KYQ+DI L E S + RE E VW
Sbjct: 125 DKEDTFFYSLVYDPSVKTLLADKGEIRVGPKYQADIPDMLPEDSDE---REQSKLEVKVW 181
Query: 343 TPHHSLTDKQIDQFLVISRSVGKF 366
P+ LTD+QIDQFLV++R+VG F
Sbjct: 182 DPNSPLTDRQIDQFLVVARAVGTF 205
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 47/51 (92%)
Query: 34 ELTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
+LT KQKHQLK RELFLSRQ E+LPATHIRGKCSV LLNETES+LSYL+KE
Sbjct: 77 DLTEKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESVLSYLDKE 127
>sp|Q9R190|MTA2_MOUSE Metastasis-associated protein MTA2 OS=Mus musculus GN=Mta2 PE=1
SV=1
Length = 668
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 130/142 (91%)
Query: 94 STFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVL 153
TFARALDCSSS++QPSLHMSAAAASRDITLFHAMDTL ++ Y LA+A+S+LVP GPVL
Sbjct: 201 GTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVL 260
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQK 213
CRDEMEEWSASEA LFEEALEKYGKDFNDIR DFLPWK+L +I+++YYMWKTTDRY+QQK
Sbjct: 261 CRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQK 320
Query: 214 RVKAVEAESKLKQVYIPNYNKP 235
R+KA EA+SKLKQVYIP Y KP
Sbjct: 321 RLKAAEADSKLKQVYIPTYTKP 342
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 283 DELDTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVW 342
D+ D FFY LVFDP QKTLLAD+GEIRVG K+Q++I L E D R + E VW
Sbjct: 122 DKEDCFFYSLVFDPVQKTLLADQGEIRVGCKFQAEIPDRLAEGESD--NRNQQKMEMKVW 179
Query: 343 TPHHSLTDKQIDQFLVISRSVGKF 366
P + LTD+QIDQFLV++R+VG F
Sbjct: 180 DPDNPLTDRQIDQFLVVARAVGTF 203
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/50 (74%), Positives = 44/50 (88%)
Query: 35 LTNKQKHQLKQRELFLSRQVETLPATHIRGKCSVTLLNETESLLSYLNKE 84
++ +Q+HQLK RELFLSRQ E+LPATHIRGKCSVTLLNET+ L YL+KE
Sbjct: 75 VSEQQRHQLKHRELFLSRQFESLPATHIRGKCSVTLLNETDILNQYLDKE 124
>sp|O94776|MTA2_HUMAN Metastasis-associated protein MTA2 OS=Homo sapiens GN=MTA2 PE=1
SV=1
Length = 668
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 115/142 (80%), Positives = 130/142 (91%)
Query: 94 STFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVL 153
TFARALDCSSS++QPSLHMSAAAASRDITLFHAMDTL ++ Y LA+A+S+LVP GPVL
Sbjct: 201 GTFARALDCSSSIRQPSLHMSAAAASRDITLFHAMDTLQRNGYDLAKAMSTLVPQGGPVL 260
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQK 213
CRDEMEEWSASEA LFEEALEKYGKDFNDIR DFLPWK+L +I+++YYMWKTTDRY+QQK
Sbjct: 261 CRDEMEEWSASEAMLFEEALEKYGKDFNDIRQDFLPWKSLASIVQFYYMWKTTDRYIQQK 320
Query: 214 RVKAVEAESKLKQVYIPNYNKP 235
R+KA EA+SKLKQVYIP Y KP
Sbjct: 321 RLKAAEADSKLKQVYIPTYTKP 342
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 286 DTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPH 345
D FFY LVFDP QKTLLAD+GEIRVG KYQ++I L E D R + E VW P
Sbjct: 125 DCFFYSLVFDPVQKTLLADQGEIRVGCKYQAEIPDRLVEGESD--NRNQQKMEMKVWDPD 182
Query: 346 HSLTDKQIDQFLVISRSVGKF 366
+ LTD+QIDQFLV++R+VG F
Sbjct: 183 NPLTDRQIDQFLVVARAVGTF 203
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 56/80 (70%), Gaps = 8/80 (10%)
Query: 8 DESSEISSINNGTSTT---DNGHPGGTSKELTNKQKHQLKQRELFLSRQVETLPATHIRG 64
D SS ++S+ + + ++ PG ++ +Q+HQLK RELFLSRQ E+LPATHIRG
Sbjct: 50 DISSSLNSLADSNAREFEEESKQPG-----VSEQQRHQLKHRELFLSRQFESLPATHIRG 104
Query: 65 KCSVTLLNETESLLSYLNKE 84
KCSVTLLNET+ L YL KE
Sbjct: 105 KCSVTLLNETDILSQYLEKE 124
>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus
GN=Rere PE=1 SV=3
Length = 1558
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 117 AASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKY 176
AASRD T +A++TL + Y +A+ LV P L + W+ E F + L +Y
Sbjct: 355 AASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPKLIE---KCWTEDEVKRFVKGLRQY 411
Query: 177 GKDFNDIRNDFLPWKTLKNIIEYYYMWKTT 206
GK+F IR + LP K +I +YY WK T
Sbjct: 412 GKNFFRIRKELLPSKETGELITFYYYWKKT 441
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 285 LDTFFYCLVFDPAQKTLLADKGEIRVGSKYQS---DITPYLGEASKDPNCRESKDFETLV 341
+D+FFY L ++P + L + +GEIRVG +Q+ D+ P+ P+ E LV
Sbjct: 263 VDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPF-----PSPDGDTVTQHEELV 317
Query: 342 WTPHHSLTDKQIDQFLVISRSVGKF 366
W P ++D + +L +RS+ F
Sbjct: 318 WMP--GVSDCDLLMYLRAARSMAAF 340
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 43 LKQRELFLSRQVETLPATHIRGKCSVT 69
+K RELF+S V+T A +RGKC+++
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNIS 248
>sp|Q62901|RERE_RAT Arginine-glutamic acid dipeptide repeats protein OS=Rattus
norvegicus GN=Rere PE=2 SV=2
Length = 1559
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 117 AASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKY 176
AASRD T +A++TL + Y +A+ LV P L + W+ E F + L +Y
Sbjct: 354 AASRDDTTLNALNTLHESSYDAGKALQRLVKKPVPKLIE---KCWTEDEVKRFVKGLRQY 410
Query: 177 GKDFNDIRNDFLPWKTLKNIIEYYYMWKTT 206
GK+F IR + LP K +I +YY WK T
Sbjct: 411 GKNFFRIRKELLPNKETGELITFYYYWKKT 440
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 285 LDTFFYCLVFDPAQKTLLADKGEIRVGSKYQS---DITPYLGEASKDPNCRESKDFETLV 341
+D+FFY L ++P + L + +GEIRVG +Q+ D+ P+ P+ E LV
Sbjct: 262 VDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPF-----PSPDGDTVTQHEELV 316
Query: 342 WTPHHSLTDKQIDQFLVISRSVGKF 366
W P ++D + +L +RS+ F
Sbjct: 317 WMP--GVSDCDLLMYLRAARSMAAF 339
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 43 LKQRELFLSRQVETLPATHIRGKCSVT 69
+K RELF+S V+T A +RGKC+++
Sbjct: 221 IKNRELFISDYVDTYHAAALRGKCNIS 247
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 117 AASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKY 176
AASRD T +A++TL + Y +A+ LV P L + W+ E F + L +Y
Sbjct: 355 AASRDDTTLNALNTLHESGYDAGKALQRLVKKPVPKLIE---KCWTEDEVKRFVKGLRQY 411
Query: 177 GKDFNDIRNDFLPWKTLKNIIEYYYMWKTT 206
GK+F IR + LP K +I +YY WK T
Sbjct: 412 GKNFFRIRKELLPNKETGELITFYYYWKKT 441
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 285 LDTFFYCLVFDPAQKTLLADKGEIRVGSKYQS---DITPYLGEASKDPNCRESKDFETLV 341
+D+FFY L ++P + L + +GEIRVG +Q+ D+ P+ P+ E LV
Sbjct: 263 VDSFFYILGYNPETRRLNSTQGEIRVGPSHQAKLPDLQPF-----PSPDGDTVTQHEELV 317
Query: 342 WTPHHSLTDKQIDQFLVISRSVGKF 366
W P + D + +L +RS+ F
Sbjct: 318 WMP--GVNDCDLLMYLRAARSMAAF 340
Score = 32.3 bits (72), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 43 LKQRELFLSRQVETLPATHIRGKCSVT 69
+K RELF+S V+T A +RGKC+++
Sbjct: 222 IKNRELFISDYVDTYHAAALRGKCNIS 248
>sp|Q7T105|MIER1_XENLA Mesoderm induction early response protein 1 OS=Xenopus laevis
GN=mier1 PE=2 SV=1
Length = 495
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---VQ 211
R+E+ W+ E FE+ L+ YGKDF+ I+ + + +++ + +YYMWK ++RY Q
Sbjct: 273 REELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFAQ 332
Query: 212 QKR 214
Q R
Sbjct: 333 QTR 335
>sp|Q5UAK0|MIER1_MOUSE Mesoderm induction early response protein 1 OS=Mus musculus
GN=Mier1 PE=1 SV=2
Length = 511
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---V 210
R+E+ W+ E FE+ L+ YGKDF+ I+ + + +++ + +YYMWK ++RY
Sbjct: 280 AREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFA 339
Query: 211 QQKR 214
QQ R
Sbjct: 340 QQTR 343
>sp|Q8N108|MIER1_HUMAN Mesoderm induction early response protein 1 OS=Homo sapiens
GN=MIER1 PE=1 SV=2
Length = 512
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---V 210
R+E+ W+ E FE+ L+ YGKDF+ I+ + + +++ + +YYMWK ++RY
Sbjct: 281 AREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFA 340
Query: 211 QQKR 214
QQ R
Sbjct: 341 QQTR 344
>sp|Q5REE1|MIER1_PONAB Mesoderm induction early response protein 1 OS=Pongo abelii
GN=MIER1 PE=2 SV=2
Length = 512
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---V 210
R+E+ W+ E FE+ L+ YGKDF+ I+ + + +++ + +YYMWK ++RY
Sbjct: 281 AREELSVWTEEECRNFEQGLKAYGKDFHLIQANKVRTRSVGECVAFYYMWKKSERYDFFA 340
Query: 211 QQKR 214
QQ R
Sbjct: 341 QQTR 344
>sp|Q5ZKT9|MIER1_CHICK Mesoderm induction early response protein 1 OS=Gallus gallus
GN=MIER1 PE=2 SV=1
Length = 513
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 154 CRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---V 210
R+E+ W+ E FE+ L+ YGKDF+ I+ + + +++ + +YYMWK ++RY
Sbjct: 283 AREELSVWTEEECRNFEQGLKVYGKDFHVIQANKVRTRSVGECVAFYYMWKKSERYDFFA 342
Query: 211 QQKR 214
QQ R
Sbjct: 343 QQTR 346
>sp|Q59E36|RCOR_DROME REST corepressor OS=Drosophila melanogaster GN=CoRest PE=1 SV=1
Length = 657
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 126 HAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRN 185
A+ L HK+ L A+ L T P +EW+ + LFE+A + +GK F+ IR
Sbjct: 152 QALGMLFWHKHDLERAVMDLANFT-PF-----PDEWTIEDKVLFEQAFQFHGKSFHRIRQ 205
Query: 186 DFLPWKTLKNIIEYYYMWKTT-------DRYVQQKRVKAV 218
LP K++ ++++YYY WK T DR Q+K +KAV
Sbjct: 206 -MLPDKSIASLVKYYYSWKKTRHRSSAMDR--QEKAIKAV 242
Score = 35.0 bits (79), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 307 EIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
+IRVG YQ+ P + EA + P + LVW+P + D ++++++ +++
Sbjct: 91 KIRVGRDYQAVCPPLVPEAERRPEQMNERAL--LVWSPTKEIPDLKLEEYISVAK 143
>sp|Q4R3R9|MIER3_MACFA Mesoderm induction early response protein 3 OS=Macaca fascicularis
GN=MIER3 PE=2 SV=1
Length = 550
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 7/105 (6%)
Query: 113 MSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEA 172
+SA +RD A+ L K +++ EAI ++ M W+ E FE A
Sbjct: 238 ISAGTHTRDNE--QALYELLKCNHNIKEAIERYC--CNGKASQEGMTAWTEEECRSFEHA 293
Query: 173 LEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---VQQKR 214
L +GKDF+ I+ + + +T+ + +YYMWK ++RY QQ R
Sbjct: 294 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTR 338
Score = 38.5 bits (88), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 305 KGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISRSVG 364
+ EI +G +YQ++I PYLGE + + E++D L+W P L K + + S G
Sbjct: 173 RKEIMIGLQYQAEIPPYLGEYAGNEKVYENED--QLLWCPDVVLESKVKEYLVETSLRTG 230
Query: 365 KFQESDR 371
+ DR
Sbjct: 231 NEKIMDR 237
>sp|Q7Z3K6|MIER3_HUMAN Mesoderm induction early response protein 3 OS=Homo sapiens
GN=MIER3 PE=1 SV=2
Length = 550
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 113 MSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEA 172
+SA +RD A+ L K +++ EAI G ++ M W+ E FE A
Sbjct: 238 ISAGTHTRDNE--QALYELLKCNHNIKEAIERYC-CNGKA-SQEGMTAWTEEECRSFEHA 293
Query: 173 LEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---VQQKR 214
L +GKDF+ I+ + + +T+ + +YYMWK ++RY QQ R
Sbjct: 294 LMLFGKDFHLIQKNKVRTRTVAECVAFYYMWKKSERYDYFAQQTR 338
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 305 KGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLV 358
+ EI +G +YQ++I PYLGE + E++D L+W P L K + ++LV
Sbjct: 173 RKEIMIGLQYQAEIPPYLGEYDGNEKVYENED--QLLWCPDVVLESK-VKEYLV 223
>sp|Q3UHF3|MIER3_MOUSE Mesoderm induction early response protein 3 OS=Mus musculus
GN=Mier3 PE=1 SV=2
Length = 551
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 158 MEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
M W+ E FE AL +GKDF+ I+ D + +T+ + +YYMWK ++RY
Sbjct: 280 MTAWTEEECRSFEHALMLHGKDFHLIQKDKVRSRTVAECVAFYYMWKKSERY 331
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 307 EIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLV 358
EI +G +YQ++I PYLGE + D + ++ + L+W P L + ++ ++LV
Sbjct: 175 EIMIGLEYQAEIPPYLGEYNGDDE-KAYENEDQLLWHP-GVLLESKVKEYLV 224
>sp|Q3U3N0|MIER2_MOUSE Mesoderm induction early response protein 2 OS=Mus musculus
GN=Mier2 PE=2 SV=1
Length = 541
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---VQ 211
RD + WS E FE +GK+F+ I+ + + +++ +EYYY+WK ++RY Q
Sbjct: 295 RDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQ 354
Query: 212 QKRV 215
Q R+
Sbjct: 355 QTRL 358
>sp|Q8N344|MIER2_HUMAN Mesoderm induction early response protein 2 OS=Homo sapiens
GN=MIER2 PE=2 SV=2
Length = 545
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY---VQ 211
RD + WS E FE +GK+F+ I+ + + +++ +EYYY+WK ++RY Q
Sbjct: 296 RDGLCAWSEEECRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYFAQ 355
Query: 212 QKRV 215
Q R+
Sbjct: 356 QTRL 359
>sp|Q9P2K3|RCOR3_HUMAN REST corepressor 3 OS=Homo sapiens GN=RCOR3 PE=1 SV=2
Length = 495
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 112 HMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEE 171
+++ A + A+ L HK+++ ++++ L P+ P +EW+ + LFE+
Sbjct: 46 YIAIAKEKHGYNVEQALGMLFWHKHNIEKSLADL-PNFTPF-----PDEWTVEDKVLFEQ 99
Query: 172 ALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTT 206
A +GK F+ I+ LP KT+ ++++YYY WK T
Sbjct: 100 AFSFHGKSFHRIQQ-MLPDKTIASLVKYYYSWKKT 133
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFET---LVWTPHHSLTDKQIDQFLVISR 361
+RVG++YQ+ I + DP + D + LVW+P+HS+ D ++D+++ I++
Sbjct: 1 MRVGAEYQARIPEF------DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAK 51
>sp|Q6PGA0|RCOR3_MOUSE REST corepressor 3 OS=Mus musculus GN=Rcor3 PE=2 SV=2
Length = 451
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 127 AMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRND 186
A+ L HK+++ ++++ L P+ P +EW+ + LFE+A +GK F+ I+
Sbjct: 117 ALGMLFWHKHNIEKSLADL-PNFTPF-----PDEWTVEDKVLFEQAFSFHGKSFHRIQQ- 169
Query: 187 FLPWKTLKNIIEYYYMWKTT 206
LP KT+ ++++YYY WK T
Sbjct: 170 MLPDKTIASLVKYYYSWKKT 189
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 9/57 (15%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFET---LVWTPHHSLTDKQIDQFLVISR 361
+RVG++YQ+ I + DP + D + LVW+P+HS+ D ++D+++ I++
Sbjct: 57 MRVGAEYQARIPEF------DPGATKYTDKDNGGMLVWSPYHSIPDAKLDEYIAIAK 107
>sp|A5PJX4|MIER2_BOVIN Mesoderm induction early response protein 2 OS=Bos taurus GN=MIER2
PE=2 SV=1
Length = 561
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 153 LCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY--- 209
+ RD + WS E FE +GK+F+ I+ + + +++ +EYYY+WK ++RY
Sbjct: 294 VIRDGLCAWSEEERRNFEHGFRVHGKNFHLIQANKVRTRSVGECVEYYYLWKKSERYDYF 353
Query: 210 VQQKRV 215
QQ R+
Sbjct: 354 SQQTRL 359
>sp|Q5ZJ40|RCOR3_CHICK REST corepressor 3 OS=Gallus gallus GN=RCOR3 PE=2 SV=1
Length = 378
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 127 AMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRND 186
A+ L HK+++ ++++ L P+ P +EW+ + LFE+A +GK F+ I+
Sbjct: 61 ALGMLFWHKHNIEKSLADL-PNFTPFP-----DEWTVEDKVLFEQAFSFHGKSFHRIQQ- 113
Query: 187 FLPWKTLKNIIEYYYMWKTT 206
LP KT+ ++++YYY WK T
Sbjct: 114 MLPDKTIASLVKYYYSWKKT 133
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
+RVG++YQ+ I + A+K + + LVW+P+H++ D ++D+++ I++
Sbjct: 1 MRVGAEYQARIPDFEPGATK---YTDKDNGGMLVWSPYHNIPDAKLDEYIAIAK 51
>sp|Q09228|EGL27_CAEEL Egg-laying defective protein 27 OS=Caenorhabditis elegans GN=egl-27
PE=2 SV=2
Length = 1129
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 121 DITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDF 180
D+ + A+ L + Y + +A+S L + ++ +++ + +A F + +++ GK+F
Sbjct: 299 DLLMDEAIIQLHRSGYKIDDALSEL--NANDIILTTDVDNMTQDDAKKFAKGIKQLGKNF 356
Query: 181 NDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRV 215
+ I + LP + + ++ YYY+WK T + K+
Sbjct: 357 SRIHRELLPHHSREQLVSYYYLWKKTPEATKPKQA 391
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 286 DTFFYCLVFDPAQKTLLADKGEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPH 345
DTFF+CL ++ L + IRVG+ +Q+ + P + E S + D + L++ P
Sbjct: 204 DTFFFCLHYNQDSTKLASTHYAIRVGTSFQATLPP-MAECS----VGDDSDRDELLYRP- 257
Query: 346 HSLTDKQIDQFLVISR 361
+S+ + + ++ ++R
Sbjct: 258 NSIESGEEEDYIKLAR 273
>sp|Q6NRZ0|RCOR2_XENLA REST corepressor 2 OS=Xenopus laevis GN=rcor2 PE=2 SV=1
Length = 503
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 159 EEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTD----------R 208
EEWS + LFE+A +GK F I+ LP K + ++++YYY WK T R
Sbjct: 130 EEWSVEDKVLFEQAFSFHGKSFQRIQQ-MLPEKLIPSLVKYYYSWKKTRSRTSVMDRQAR 188
Query: 209 YVQQKRVKAVE 219
+Q KR + +E
Sbjct: 189 RLQAKREEGME 199
>sp|Q8C796|RCOR2_MOUSE REST corepressor 2 OS=Mus musculus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 75 ESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKH 134
ES Y NKE + +V P+ C S K +++ A + A+ L H
Sbjct: 62 ESPARYSNKELKGMLVWSPN------HCVSDAKL-DKYIAMAKEKHGYNIEQALGMLLWH 114
Query: 135 KYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLK 194
K+ + ++++ L T +EW+ + LFE+A +GK F I+ LP K +
Sbjct: 115 KHDVEKSLADLANFT------PFPDEWTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKVIP 167
Query: 195 NIIEYYYMWKTT 206
++++YYY WK T
Sbjct: 168 SLVKYYYSWKKT 179
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
IRVG+ YQ+ I E+ + +E K LVW+P+H ++D ++D+++ +++
Sbjct: 46 IRVGTNYQAVIPECKPESPARYSNKELKGM--LVWSPNHCVSDAKLDKYIAMAK 97
>sp|Q5FWT8|RCOR2_RAT REST corepressor 2 OS=Rattus norvegicus GN=Rcor2 PE=2 SV=1
Length = 523
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 75 ESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKH 134
ES Y NKE + +V P+ C S K +++ A + A+ L H
Sbjct: 62 ESPARYSNKELKGMLVWSPN------HCVSDAKL-DKYIAMAKEKHGYNIEQALGMLLWH 114
Query: 135 KYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLK 194
K+ + ++++ L T +EW+ + LFE+A +GK F I+ LP K +
Sbjct: 115 KHDVEKSLADLANFT------PFPDEWTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIP 167
Query: 195 NIIEYYYMWKTT 206
++++YYY WK T
Sbjct: 168 SLVKYYYSWKKT 179
Score = 36.6 bits (83), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
IRVG+ YQ+ I E+ + +E K LVW+P+H ++D ++D+++ +++
Sbjct: 46 IRVGTNYQAVIPECKPESPARYSNKELKGM--LVWSPNHCVSDAKLDKYIAMAK 97
>sp|Q8IZ40|RCOR2_HUMAN REST corepressor 2 OS=Homo sapiens GN=RCOR2 PE=1 SV=2
Length = 523
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 75 ESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLHMSAAAASRDITLFHAMDTLDKH 134
ES Y NKE + +V P+ C S K +++ A + A+ L H
Sbjct: 62 ESPARYSNKELKGMLVWSPN------HCVSDAKL-DKYIAMAKEKHGYNIEQALGMLLWH 114
Query: 135 KYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLK 194
K+ + ++++ L T +EW+ + LFE+A +GK F I+ LP K +
Sbjct: 115 KHDVEKSLADLANFT------PFPDEWTVEDKVLFEQAFGFHGKCFQRIQQ-MLPDKLIP 167
Query: 195 NIIEYYYMWKTT 206
++++YYY WK T
Sbjct: 168 SLVKYYYSWKKT 179
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
IRVG+ YQ+ I E+ + +E K LVW+P+H ++D ++D+++ +++
Sbjct: 46 IRVGTNYQAVIPECKPESPARYSNKELKGM--LVWSPNHCVSDAKLDKYIAMAK 97
>sp|Q9UKL0|RCOR1_HUMAN REST corepressor 1 OS=Homo sapiens GN=RCOR1 PE=1 SV=1
Length = 482
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 112 HMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEE 171
+++ A + A+ L HK+++ ++++ L P+ P +EW+ + LFE+
Sbjct: 149 YIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADL-PNFTPF-----PDEWTVEDKVLFEQ 202
Query: 172 ALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTT-------DRYV-QQKR 214
A +GK F+ I+ LP K++ +++++YY WK T DR+ +QKR
Sbjct: 203 AFSFHGKTFHRIQ-QMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQKR 252
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 306 GEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
G +RVG +YQ+ + P A +E + LVW+P+ +L++ ++D+++ I++
Sbjct: 100 GGMRVGPQYQA-VVPDFDPAKLARRSQERDNLGMLVWSPNQNLSEAKLDEYIAIAK 154
>sp|Q8CFE3|RCOR1_MOUSE REST corepressor 1 OS=Mus musculus GN=Rcor1 PE=1 SV=2
Length = 477
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 112 HMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEE 171
+++ A + A+ L HK+++ ++++ L P+ P +EW+ + LFE+
Sbjct: 143 YIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADL-PNFTPF-----PDEWTVEDKVLFEQ 196
Query: 172 ALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTT-------DRYVQQKR 214
A +GK F+ I+ LP K++ +++++YY WK T DR+ ++++
Sbjct: 197 AFSFHGKTFHRIQ-QMLPDKSIASLVKFYYSWKKTRTKTSVMDRHARKQK 245
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 306 GEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
G +RVG +YQ+ + P A +E + LVW+P+ SL++ ++D+++ I++
Sbjct: 94 GGMRVGPQYQAAV-PDFDPAKLARRSQERDNLGMLVWSPNQSLSEAKLDEYIAIAK 148
>sp|Q90WN5|RCOR1_XENLA REST corepressor 1 OS=Xenopus laevis GN=rcor1 PE=2 SV=1
Length = 431
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 60/111 (54%), Gaps = 15/111 (13%)
Query: 112 HMSAAAASRDITLFHAMDTLDKHKYSLAEAISSLVPSTGPVLCRDEMEEWSASEANLFEE 171
++S A + A+ L HK+++ ++++ L+ T P +EW+ + LFE+
Sbjct: 98 YISVAKEKHGYNMEQALGMLFWHKHNIEKSLADLLNFT-PFP-----DEWTVEDRVLFEQ 151
Query: 172 ALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTT-------DRYV-QQKR 214
A +GK F+ I+ LP K++ +++++YY WK T DR+ +QKR
Sbjct: 152 AFSFHGKTFHRIQQ-MLPDKSIASLVKFYYSWKKTRSKTSVMDRHARKQKR 201
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 306 GEIRVGSKYQSDITPYLGEASKDPNCRESKDFETLVWTPHHSLTDKQIDQFLVISR 361
G +RVG +YQ+ + + E +K NC+E ++ LVW+P+ ++++ ++D+++ +++
Sbjct: 50 GGMRVGLQYQAVVPEFDQEVAK--NCQERENLGMLVWSPNQNISEAKLDEYISVAK 103
>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus musculus GN=Trerf1 PE=1
SV=1
Length = 1205
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 159 EEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAV 218
++W++ E LF +AL Y KDF ++ + KT+ +EYYY WK R ++ R +
Sbjct: 894 DKWTSLERKLFNKALATYSKDFIFVQK-MVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLA 952
Query: 219 E 219
E
Sbjct: 953 E 953
>sp|Q96PN7|TREF1_HUMAN Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1
SV=1
Length = 1200
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 159 EEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYVQQKRVKAV 218
++W++ E LF +AL Y KDF ++ + KT+ +EYYY WK R ++ R +
Sbjct: 888 DKWTSLERKLFNKALATYSKDFIFVQK-MVKSKTVAQCVEYYYTWKKIMRLGRKHRTRLA 946
Query: 219 E 219
E
Sbjct: 947 E 947
>sp|Q6P116|RCOR2_DANRE REST corepressor 2 OS=Danio rerio GN=rcor2 PE=2 SV=1
Length = 536
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 159 EEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTT 206
+EW+ + LFE+A +GK F+ I+ LP K + ++++YYY WK T
Sbjct: 127 DEWTVEDKVLFEQAFSFHGKSFHRIQQ-MLPDKMITSLVKYYYSWKKT 173
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 308 IRVGSKYQSDITPYLGEASKDPNCR----ESKDFETLVWTPHHSLTDKQIDQFLVISR 361
IRVG YQ+ I + P+C E LVW+P+ ++D +D+++++++
Sbjct: 40 IRVGGDYQAQIPEF------KPDCASRYGEKDQRSMLVWSPNSQVSDAMLDEYILMAK 91
>sp|Q9H0D2|ZN541_HUMAN Zinc finger protein 541 OS=Homo sapiens GN=ZNF541 PE=2 SV=2
Length = 1365
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 161 WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
W+ E LF++A + KDF I + + KT+ +EYYY+WK ++
Sbjct: 1184 WTPIEKRLFKKAFYAHKKDFYLI-HKMIQTKTVAQCVEYYYIWKKMIKF 1231
>sp|Q96RY5|CRML_HUMAN Protein cramped-like OS=Homo sapiens GN=CRAMP1L PE=1 SV=3
Length = 1269
Score = 39.3 bits (90), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFL--------PWKTLKNIIE----YYYM 202
R + E WS + N F E L ++GKDF I+N+ P +KN + YY
Sbjct: 160 RRQWESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRT 219
Query: 203 WKTTDRYV 210
W +Y+
Sbjct: 220 WHKITKYI 227
>sp|Q6PG95|CRML_MOUSE Protein cramped-like OS=Mus musculus GN=Cramp1l PE=2 SV=3
Length = 1285
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFL--------PWKTLKNIIE----YYYM 202
R + E WS + N F E L ++GKDF I+N+ P +KN + YY
Sbjct: 157 RRQWESWSTEDKNTFFEGLYEHGKDFEAIQNNIALKYKKKGKPASMVKNKEQVRHFYYRT 216
Query: 203 WKTTDRYV 210
W +Y+
Sbjct: 217 WHKITKYI 224
>sp|Q3IE45|ILVC_PSEHT Ketol-acid reductoisomerase OS=Pseudoalteromonas haloplanktis
(strain TAC 125) GN=ilvC PE=3 SV=1
Length = 490
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 149 TGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDR 208
TG +LC D+M E + L +YG W+ + ++Y + DR
Sbjct: 231 TGSILCFDKMIEKGIDAG--YASKLIQYG------------WEVITEALKYGGVTNMLDR 276
Query: 209 YVQQKRVKAVEAESKLKQVYIPNYNK 234
+VKA E +LKQ+ P YNK
Sbjct: 277 LSNPAKVKAFELSEELKQIMRPLYNK 302
>sp|Q4R2Z8|ZN541_MACFA Zinc finger protein 541 (Fragment) OS=Macaca fascicularis GN=ZNF541
PE=2 SV=2
Length = 804
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 161 WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
W+ E LF++A + KDF I KT+ +EYYY+WK ++
Sbjct: 621 WTPIEKRLFKKAFYAHKKDFYLIHKTIQ-TKTVAQCVEYYYIWKKMIKF 668
>sp|Q0GGX2|ZN541_MOUSE Zinc finger protein 541 OS=Mus musculus GN=Znf541 PE=1 SV=1
Length = 1363
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 161 WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
W+ E LF++A + KDF I + + K++ +EYYY+WK ++
Sbjct: 1175 WTPMEKRLFKKAFCAHKKDFYLI-HKMIQTKSVAQCVEYYYIWKKMVKF 1222
>sp|Q18919|RCOR_CAEEL REST corepressor spr-1 OS=Caenorhabditis elegans GN=spr-1 PE=1 SV=2
Length = 558
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 155 RDEMEE-WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRYV 210
R+E+++ W+ E LFE + +GK+F+ IR+ L ++L++I+++YY K +Y+
Sbjct: 191 RNELKDVWTDQEITLFENCYQIFGKNFSQIRS-ALCHRSLQSIVQFYYESKKRVKYL 246
>sp|P34333|GEI8_CAEEL Gex-3-interacting protein 8 OS=Caenorhabditis elegans GN=gei-8 PE=1
SV=3
Length = 1866
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 156 DEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
D +EEWS E +LF+ + K F+ + +F KT +++ +YYM K T+ Y
Sbjct: 213 DRLEEWSPEERSLFKSRQADHVKIFHGL-TEFFVDKTASDLVLFYYMNKKTEDY 265
>sp|Q9Y618|NCOR2_HUMAN Nuclear receptor corepressor 2 OS=Homo sapiens GN=NCOR2 PE=1 SV=2
Length = 2525
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 155 RDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
R M WS E F E ++ K+F I + FL KT+ + YYY+ K + Y
Sbjct: 426 RQVMNMWSEQEKETFREKFMQHPKNFGLIAS-FLERKTVAECVLYYYLTKKNENY 479
>sp|Q66616|VG10_EHV2 Uncharacterized gene 10 protein OS=Equine herpesvirus 2 (strain
86/87) GN=10 PE=4 SV=1
Length = 405
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 53 QVETLPATHIRGKCSVTLLNETESLLSYLNKEPRSFVVSLPSTFARALDCSSSVKQPSLH 112
+VE PA ++T++N +E + ++PR +++LP + A++C QP+
Sbjct: 27 KVEVTPA-------ALTVVNTSEVPV----QDPRCTIITLPFSVWSAMECMLCRFQPANQ 75
Query: 113 MSAAAASRDITLFHAMDTLDKHKYSLAEAISS 144
+ A D T LD+ +Y + E + S
Sbjct: 76 LHVACKLFDTTFILQNQDLDQSRYVVVETVVS 107
>sp|P53127|SNT2_YEAST SANT domain-containing protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNT2 PE=1 SV=1
Length = 1403
Score = 35.8 bits (81), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 161 WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDR 208
++A E FEEA+EK+G + + +++ + + I+ +YY WK T+R
Sbjct: 560 FTAVEIRKFEEAVEKFGSELRPV-CEYVGTQPMSMIVRFYYNWKKTER 606
>sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus GN=Ncor2 PE=1 SV=3
Length = 2472
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 161 WSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDRY 209
WS E + F E ++ K+F I + FL KT+ + YYY+ K + Y
Sbjct: 432 WSEQERDTFREKFMQHPKNFGLIAS-FLERKTVAECVLYYYLTKKNENY 479
>sp|A6W216|ILVC_MARMS Ketol-acid reductoisomerase OS=Marinomonas sp. (strain MWYL1)
GN=ilvC PE=3 SV=1
Length = 490
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 149 TGPVLCRDEMEEWSASEANLFEEALEKYGKDFNDIRNDFLPWKTLKNIIEYYYMWKTTDR 208
TG +LC D+M E + L +YG W+T+ ++Y + DR
Sbjct: 231 TGSILCFDKMVEEGIDAG--YASRLIQYG------------WETITEALKYGGVTNMLDR 276
Query: 209 YVQQKRVKAVEAESKLKQVYIPNYNK 234
++KA + +LK + P YNK
Sbjct: 277 LSNPAKIKAFDLSEELKVIMRPLYNK 302
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.129 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,950,933
Number of Sequences: 539616
Number of extensions: 5677493
Number of successful extensions: 11914
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 11805
Number of HSP's gapped (non-prelim): 111
length of query: 382
length of database: 191,569,459
effective HSP length: 119
effective length of query: 263
effective length of database: 127,355,155
effective search space: 33494405765
effective search space used: 33494405765
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)