BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2143
(149 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q945U1|RS15_ELAOL 40S ribosomal protein S15 OS=Elaeis oleifera GN=RPS15 PE=2 SV=1
Length = 153
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 97/107 (90%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
V Q KKRTFRKF++RGVDLDQLLDM T++L++L H RARRRF RG+KRKPMAL+KKLR
Sbjct: 10 VGGAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLR 69
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAK++APP EKPE V+THLRNMIIVPEM+GS++GVYNGKTFNQVEIK
Sbjct: 70 KAKRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 116
>sp|O65059|RS15_PICMA 40S ribosomal protein S15 OS=Picea mariana GN=RPS15 PE=2 SV=1
Length = 151
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/107 (74%), Positives = 95/107 (88%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
V Q KKRTF+KF++RGVDLD LLDM +E+L++L H RARRRF RG+KR+PMAL+KKLR
Sbjct: 8 VGPVQPKKRTFKKFSYRGVDLDALLDMTSEELVKLFHARARRRFQRGLKRQPMALIKKLR 67
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAK+EAP EKPE V+THLRNMIIVPEM+GS++GVYNGKTFNQVEIK
Sbjct: 68 KAKREAPSGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 114
>sp|P31674|RS15_ORYSJ 40S ribosomal protein S15 OS=Oryza sativa subsp. japonica GN=RPS15
PE=2 SV=2
Length = 154
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 92/104 (88%)
Query: 46 TQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAK 105
Q KKRTFRK+++RGVDLD LLDM T+ L++L RARRRF RG+KRKPMAL+KKLRKAK
Sbjct: 14 AQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKAK 73
Query: 106 KEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
K+AP EKPE V+THLRNMIIVPEM+GS+VGVYNGKTFNQVEIK
Sbjct: 74 KDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIK 117
>sp|Q9FY66|RS152_ARATH 40S ribosomal protein S15-2 OS=Arabidopsis thaliana GN=RPS15B PE=2
SV=1
Length = 152
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 90/101 (89%)
Query: 49 KKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEA 108
KKRTF+KF+F+GVDLD LLDMPT+ L+EL R RRR +RG+ RKPMAL+KKLRKAK +A
Sbjct: 15 KKRTFKKFSFKGVDLDALLDMPTDDLVELFPSRIRRRMSRGLTRKPMALIKKLRKAKLDA 74
Query: 109 PPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P EKPEVV+THLRNM+I+PEM+GS++GVYNGKTFNQ+EIK
Sbjct: 75 PAGEKPEVVRTHLRNMVIMPEMIGSIIGVYNGKTFNQIEIK 115
>sp|Q9FY65|RS153_ARATH 40S ribosomal protein S15-3 OS=Arabidopsis thaliana GN=RPS15C PE=2
SV=1
Length = 150
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/101 (76%), Positives = 88/101 (87%)
Query: 49 KKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEA 108
KKRTF+KF+FRGVDLD LLDM T+ L++L R RRRF+RG+ RKPMAL+KKLRKAK EA
Sbjct: 13 KKRTFKKFSFRGVDLDALLDMSTDDLVKLFPSRIRRRFSRGLTRKPMALIKKLRKAKIEA 72
Query: 109 PPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P EKP V+THLRNMIIVPEM+GSV+GVYNGKTFNQVEIK
Sbjct: 73 PAGEKPAAVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIK 113
>sp|P34737|RS15_PODAS 40S ribosomal protein S15 OS=Podospora anserina GN=RPS15 PE=3 SV=1
Length = 152
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 72/102 (70%), Positives = 93/102 (91%)
Query: 48 KKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKE 107
KKKRTFRKF++RGVDLD LLD+ +++L +++H RARR+ RG+KR+PM L+KKLRKAK+E
Sbjct: 14 KKKRTFRKFSYRGVDLDALLDLTSDELRDVVHARARRKINRGLKRRPMGLIKKLRKAKQE 73
Query: 108 APPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
A PNEKP++VKTHLR+MI+VPEM+GSVVG+Y+GK FNQVEIK
Sbjct: 74 AKPNEKPDLVKTHLRDMIVVPEMIGSVVGIYSGKEFNQVEIK 115
>sp|P62845|RS15_RAT 40S ribosomal protein S15 OS=Rattus norvegicus GN=Rps15 PE=1 SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|Q5RDI7|RS15_PONAB 40S ribosomal protein S15 OS=Pongo abelii GN=RPS15 PE=2 SV=3
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|P62844|RS15_PIG 40S ribosomal protein S15 OS=Sus scrofa GN=RPS15 PE=2 SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|P62843|RS15_MOUSE 40S ribosomal protein S15 OS=Mus musculus GN=Rps15 PE=2 SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|P62842|RS15_MESAU 40S ribosomal protein S15 OS=Mesocricetus auratus GN=RPS15 PE=2
SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|P62841|RS15_HUMAN 40S ribosomal protein S15 OS=Homo sapiens GN=RPS15 PE=1 SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|P62846|RS15_CHICK 40S ribosomal protein S15 OS=Gallus gallus GN=RPS15 PE=2 SV=2
Length = 145
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKKEAPP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|Q56K10|RS15_BOVIN 40S ribosomal protein S15 OS=Bos taurus GN=RPS15 PE=2 SV=3
Length = 145
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 93/107 (86%)
Query: 43 VEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLR 102
E QKKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+LR
Sbjct: 2 AEVEQKKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLR 61
Query: 103 KAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KAKK+APP EKPEVVKTHLR+MII+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 62 KAKKDAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|Q9FY64|RS154_ARATH 40S ribosomal protein S15-4 OS=Arabidopsis thaliana GN=RPS15D PE=2
SV=1
Length = 152
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 89/101 (88%)
Query: 49 KKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEA 108
KKRTF+KF F+GVDLD LLDM T+ L++L R RRRF+RG+ RKPMAL+KKLRKAK+EA
Sbjct: 15 KKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREA 74
Query: 109 PPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P EKPE V+THLRNMIIVPEM+GS++GVYNGKTFNQVEIK
Sbjct: 75 PAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 115
>sp|Q08112|RS151_ARATH 40S ribosomal protein S15-1 OS=Arabidopsis thaliana GN=RPS15A PE=1
SV=1
Length = 152
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 89/101 (88%)
Query: 49 KKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEA 108
KKRTF+KF F+GVDLD LLDM T+ L++L R RRRF+RG+ RKPMAL+KKLRKAK+EA
Sbjct: 15 KKRTFKKFAFKGVDLDALLDMSTDDLVKLFSSRIRRRFSRGLTRKPMALIKKLRKAKREA 74
Query: 109 PPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P EKPE V+THLRNMIIVPEM+GS++GVYNGKTFNQVEIK
Sbjct: 75 PQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 115
>sp|Q9UTQ6|RS15B_SCHPO 40S ribosomal protein S15-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps15b PE=1 SV=1
Length = 154
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 82/102 (80%)
Query: 48 KKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKE 107
+KKRTFR F +RGV+L+QLLD+ EQL++L H RARRR RG+ ++KLRKAK E
Sbjct: 16 RKKRTFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKSE 75
Query: 108 APPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
AP NEKP VKTHLRNMII+PEMVGSVVG+YNGK FNQVEI+
Sbjct: 76 APLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIR 117
>sp|O94715|RS15A_SCHPO 40S ribosomal protein S15-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps15a PE=3 SV=1
Length = 153
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 82/102 (80%)
Query: 48 KKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKE 107
+KKR+FR F +RGV+L+QLLD+ EQL++L H RARRR RG+ ++KLRKAK E
Sbjct: 15 RKKRSFRTFAYRGVELEQLLDLSAEQLVDLFHARARRRMLRGLGPNASRFIRKLRKAKTE 74
Query: 108 APPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
AP NEKP VKTHLRNMII+PEMVGSVVG+YNGK FNQVEI+
Sbjct: 75 APLNEKPATVKTHLRNMIILPEMVGSVVGIYNGKLFNQVEIR 116
>sp|Q9FIX6|RS155_ARATH 40S ribosomal protein S15-5 OS=Arabidopsis thaliana GN=RPS15E PE=3
SV=1
Length = 149
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 86/101 (85%)
Query: 49 KKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEA 108
KKRTF+KF+FRGVDLD LLDM E L++ R RRRF+RG+ RKPMAL+KKLRKAK EA
Sbjct: 12 KKRTFKKFSFRGVDLDALLDMSIEDLVKHFSSRIRRRFSRGLTRKPMALIKKLRKAKMEA 71
Query: 109 PPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P EKP V+THLRNMIIVPEM+GS++GVYNGKTFNQVEIK
Sbjct: 72 PAGEKPASVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 112
>sp|P70066|RS15_XIPMA 40S ribosomal protein S15 OS=Xiphophorus maculatus GN=rps15 PE=2
SV=1
Length = 145
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 90/102 (88%)
Query: 48 KKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKE 107
KKKRTFRKFT+RGVDLDQLLDM EQLM+L R RRR RG++RK +L+K+L KAKKE
Sbjct: 7 KKKRTFRKFTYRGVDLDQLLDMSYEQLMQLYCARQRRRLNRGLRRKHQSLLKRLPKAKKE 66
Query: 108 APPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
APP EKPEVVKTHLR+M+I+PEMVGS+VGVYNGKTFNQVEIK
Sbjct: 67 APPMEKPEVVKTHLRDMVILPEMVGSMVGVYNGKTFNQVEIK 108
>sp|Q01855|RS15_YEAST 40S ribosomal protein S15 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPS15 PE=1 SV=1
Length = 142
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 80/106 (75%)
Query: 44 EETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRK 103
+ KKR F+ ++RGVDL++LL+M TE ++L R RRRFARG+ KP +KKLR
Sbjct: 3 QAVNAKKRVFKTHSYRGVDLEKLLEMSTEDFVKLAPARVRRRFARGMTSKPAGFMKKLRA 62
Query: 104 AKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
AK AP NEKP V+TH+RNMIIVPEM+GSVVG+YNGK FNQVEI+
Sbjct: 63 AKLAAPENEKPAPVRTHMRNMIIVPEMIGSVVGIYNGKAFNQVEIR 108
>sp|Q9FML6|RS156_ARATH 40S ribosomal protein S15-6 OS=Arabidopsis thaliana GN=RPS15F PE=2
SV=1
Length = 160
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 68/112 (60%), Positives = 85/112 (75%), Gaps = 2/112 (1%)
Query: 40 FSTVEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVK 99
F+T KKRTF+KF+FRG ++D LL M L +L + R RRRF RG+K++P+ L+K
Sbjct: 8 FATAVAVATKKRTFKKFSFRGFNVDALLKMSNVDLAKLFNARVRRRFYRGLKKQPLILIK 67
Query: 100 KLRKAKKEAPPNE--KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KLR+AKKEA KPEVVKTHLRNMIIVPEM+GSVVGV+NGK FN++ IK
Sbjct: 68 KLRRAKKEASDENKMKPEVVKTHLRNMIIVPEMIGSVVGVHNGKKFNEIVIK 119
>sp|Q9XVP0|RS15_CAEEL 40S ribosomal protein S15 OS=Caenorhabditis elegans GN=rps-15 PE=1
SV=3
Length = 151
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 82/102 (80%)
Query: 48 KKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKE 107
KKKRTFRKF +RGVDLDQLLDM EQ +L+ CR RRR RG+KRK +AL+ K++KAKK
Sbjct: 13 KKKRTFRKFMYRGVDLDQLLDMSREQFTKLLPCRMRRRLDRGLKRKHLALIAKVQKAKKA 72
Query: 108 APPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
A EKP VKTHLR+MII+PE+VG V+G+YNGK FNQ EIK
Sbjct: 73 AGVLEKPATVKTHLRDMIILPELVGGVIGIYNGKVFNQTEIK 114
>sp|P20342|RS15_XENLA 40S ribosomal protein S15 OS=Xenopus laevis GN=rps15 PE=2 SV=3
Length = 145
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 80/92 (86%)
Query: 58 FRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEKPEVV 117
+RGVDLDQLLDM EQ+M+L R RRR RG++RK +L+K+LRKAKKEAPP EKPEV+
Sbjct: 17 YRGVDLDQLLDMSYEQVMQLYCARQRRRLNRGLRRKQNSLLKRLRKAKKEAPPMEKPEVI 76
Query: 118 KTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
KTHLR+MII+PEMVGS+VGVYNGK FNQVEIK
Sbjct: 77 KTHLRDMIILPEMVGSMVGVYNGKAFNQVEIK 108
>sp|Q54N17|RS15_DICDI 40S ribosomal protein S15 OS=Dictyostelium discoideum GN=rps15 PE=3
SV=1
Length = 144
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 47 QKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKK 106
Q KKRTF+KFT+ GV L+ LLD+ EQL+ L+ CRARR+ R K + +KK R +K
Sbjct: 4 QIKKRTFKKFTYSGVALESLLDLKEEQLISLLRCRARRKLRRETPIKHVNFLKKCRASKA 63
Query: 107 EAPP-NEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
EKP +VKTH RN++IVPEM+GSV+G+YNGK FNQVE+K
Sbjct: 64 AVTQVGEKPALVKTHARNILIVPEMIGSVIGIYNGKVFNQVEVK 107
>sp|A1RWQ5|RS19_THEPD 30S ribosomal protein S19 OS=Thermofilum pendens (strain Hrk 5)
GN=rps19 PE=3 SV=1
Length = 141
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
Query: 55 KFTFRGVDLDQLLDMPTEQLMELMHCRARRR----FARGIKRKPMALVKKLRKAKKEAPP 110
KFT+RG L++L MP E+L E+M R RR F +G + + L++K+R+A K A
Sbjct: 6 KFTYRGYTLEELRQMPIEKLAEIMPARQRRSLLRVFKQGTSEEHLKLLEKIRRAAKLASE 65
Query: 111 NEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
+K V+KTHLR+ II+PEMVG + V+NGK F VEI
Sbjct: 66 GKKQPVIKTHLRDFIILPEMVGLTIHVHNGKEFVPVEI 103
>sp|A5UL85|RS19_METS3 30S ribosomal protein S19 OS=Methanobrevibacter smithii (strain PS
/ ATCC 35061 / DSM 861) GN=rps19 PE=3 SV=1
Length = 136
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 61/94 (64%)
Query: 56 FTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEKPE 115
F ++G L++L DM E++MEL R RR RG + ++ K+RK KE + +P
Sbjct: 6 FKYKGYTLEELQDMSLEEVMELFPARQRRSLKRGFLPRQQIVLDKMRKLNKEGSKDGRPV 65
Query: 116 VVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
V++TH R+MI++PEMVG+ G+YNG+ F +V I+
Sbjct: 66 VIRTHCRDMIVLPEMVGTTFGIYNGQNFVEVTIE 99
>sp|A2BMB3|RS19_HYPBU 30S ribosomal protein S19 OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rps19 PE=3 SV=2
Length = 144
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
++KF +RG L++LL MP +Q ++L+ R RR RG+ L+ K+RKA+++ +
Sbjct: 12 WKKFRYRGYTLEELLAMPMDQFIKLLPARQRRSLLRGLTDAQRRLLWKIRKARQKMLQGK 71
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K VVKTH+R+MII+PEMVG + VYNGK F V+I
Sbjct: 72 K-VVVKTHVRDMIILPEMVGLTIAVYNGKEFIPVKI 106
>sp|Q4JB44|RS19_SULAC 30S ribosomal protein S19 OS=Sulfolobus acidocaldarius (strain ATCC
33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770)
GN=rps19 PE=3 SV=1
Length = 140
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
++KF +RG L+ LL+MP ++ ++L+ R RR RG K L++K+RK +E N+
Sbjct: 9 WKKFRYRGKSLEDLLNMPMDEFIKLLPSRQRRSLKRGFSDKQRRLLEKIRKISREGKQNK 68
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
V+KTH+RNM+I+PEMVG VYNGK F + ++
Sbjct: 69 ---VIKTHVRNMVILPEMVGLRFAVYNGKEFVEFQV 101
>sp|A4WIZ3|RS19_PYRAR 30S ribosomal protein S19 OS=Pyrobaculum arsenaticum (strain DSM
13514 / JCM 11321) GN=rps19 PE=3 SV=1
Length = 159
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
+ F +RG L++LL+MP ++ ++L+ R RR RG+K + L++K+RKAK+ A +
Sbjct: 27 WATFRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGK 86
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K V+KTH R+MII+PEMVG + VYNG T+ V I
Sbjct: 87 K-VVIKTHCRDMIILPEMVGLTIQVYNGITYIPVYI 121
>sp|A3DNB1|RS19_STAMF 30S ribosomal protein S19 OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps19 PE=3 SV=1
Length = 143
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
++KF +RG L++LL+MP ++ + L+ R RR RG+ + L+ K+RK +++ +
Sbjct: 11 WKKFRYRGKTLEELLNMPMDEFIGLLPARQRRSLKRGLTMAQVKLLAKIRKVRQKKLTGK 70
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K ++KTH+R+MII+PEM+G + VYNGK F V I
Sbjct: 71 K-AIIKTHVRDMIILPEMIGLTIAVYNGKEFIPVRI 105
>sp|O26114|RS19_METTH 30S ribosomal protein S19 OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=rps19 PE=3 SV=1
Length = 136
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 64/96 (66%)
Query: 54 RKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEK 113
++F +RG L++L +MP + +++L R RR RG + +++K+RK KKE +
Sbjct: 4 KEFRYRGYTLEELQEMPLDDVIKLFPSRQRRSLKRGFLPRQKKVLEKIRKIKKEGKTEGR 63
Query: 114 PEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P V++TH R+MI++PEMVG G++NGK F +V+I+
Sbjct: 64 PPVIRTHCRDMIVLPEMVGMTFGIHNGKEFVEVKIQ 99
>sp|A1RV74|RS19_PYRIL 30S ribosomal protein S19 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rps19 PE=3 SV=1
Length = 160
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
+ F +RG L++LL+MP ++ ++L+ R RR RG+K + L++K+RKAKK +
Sbjct: 28 WSTFRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKKLMAQGK 87
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K V+KTH R+MII+PEMVG + VYNG T+ V I
Sbjct: 88 K-VVIKTHCRDMIILPEMVGLTIHVYNGITYIPVFI 122
>sp|A4FVX8|RS19_METM5 30S ribosomal protein S19 OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=rps19 PE=3 SV=1
Length = 161
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 61/93 (65%)
Query: 56 FTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEKPE 115
F ++G L++L +MP ++ ME++ R RR ARGI K LV K++KA++ ++
Sbjct: 31 FKYKGFTLEELQEMPIKKFMEIVPSRQRRTMARGITPKQRKLVMKIKKARRLTNRGKEAR 90
Query: 116 VVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
V++TH R+ +I PEM+G G+YNGK F ++++
Sbjct: 91 VIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKL 123
>sp|Q6LX07|RS19_METMP 30S ribosomal protein S19 OS=Methanococcus maripaludis (strain S2 /
LL) GN=rps19 PE=3 SV=1
Length = 161
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 29 YNDRGEYRTRNFSTVEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFAR 88
Y+ +G R +N + ++R +F ++G L++L +MP ++ ME++ R RR AR
Sbjct: 7 YSGKGGARKKN-KQKQNVAPRRRV--EFKYKGFSLEELQEMPIKKFMEIVPSRQRRTMAR 63
Query: 89 GIKRKPMALVKKLRKAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
GI K LV K++KA++ + V++TH R+ +I PEM+G G+YNGK F ++++
Sbjct: 64 GITPKQRKLVMKIKKARRLTNRGKDARVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKL 123
>sp|A6VHD6|RS19_METM7 30S ribosomal protein S19 OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=rps19 PE=3 SV=1
Length = 161
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 72/120 (60%), Gaps = 3/120 (2%)
Query: 29 YNDRGEYRTRNFSTVEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFAR 88
Y+ +G R +N + ++R +F ++G L++L +MP ++ ME++ R RR R
Sbjct: 7 YSGKGGARKKN-KQKQSVAPRRRV--EFKYKGFTLEELQEMPIKKFMEIVPSRQRRTMLR 63
Query: 89 GIKRKPMALVKKLRKAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
GI LV K++KA++ ++P V++TH R+ +I PEM+G G+YNGK F ++++
Sbjct: 64 GITPNQRKLVMKIKKARRLTNRGKEPRVIRTHCRDFVITPEMIGLTFGIYNGKEFKEIKL 123
>sp|Q975I5|RS19_SULTO 30S ribosomal protein S19 OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps19 PE=3 SV=1
Length = 140
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 63/96 (65%), Gaps = 3/96 (3%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
++KF +RG LD+LL+MP ++ ++L+ R RR +G K L++K+RK +E +
Sbjct: 9 WKKFRYRGKSLDELLNMPMDEFIKLLPSRQRRSLKKGFSDKQRRLLEKIRKYVREG---K 65
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
+ +KTH+R+MII+PEMVG VYNGK F + ++
Sbjct: 66 YSKTIKTHVRDMIILPEMVGLKFAVYNGKEFVEFQV 101
>sp|A9A9B4|RS19_METM6 30S ribosomal protein S19 OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=rps19 PE=3 SV=1
Length = 161
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 69/120 (57%), Gaps = 3/120 (2%)
Query: 29 YNDRGEYRTRNFSTVEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFAR 88
Y+ +G R +N +++ FR ++G L++L +MP ++ ME++ R RR R
Sbjct: 7 YSGKGGARKKNKQKQSVAPRRRVEFR---YKGFTLEELQEMPIKKFMEIVPSRQRRTMLR 63
Query: 89 GIKRKPMALVKKLRKAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
GI LV K++KA++ ++P V++TH R+ +I PEM+G G+YNGK F V +
Sbjct: 64 GITPNQRKLVMKIKKARRLTNRGKEPRVIRTHCRDFVITPEMIGLTFGIYNGKEFKDVTL 123
>sp|A6UV64|RS19_META3 30S ribosomal protein S19 OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rps19 PE=3 SV=1
Length = 162
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 29 YNDRGEYRTRNFSTVEETQKKKRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFAR 88
++ +G R++ ++ ++R +F ++G L +L +MP ++ ME++ R RR +
Sbjct: 7 FSGKGSARSKRKQNRKQVGPRRRV--EFKYKGFTLGELQEMPIKKFMEIVPARQRRSMKK 64
Query: 89 GIKRKPMALVKKLRKAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
GI K LV K++KA++ A + P ++TH R+ +I PEM+G G+YNGK F +V++
Sbjct: 65 GITPKQRKLVMKIKKARRLANRGKDPRTIRTHCRDFVITPEMIGLPFGIYNGKEFIEVKL 124
>sp|P51429|RS15_NAEGR 40S ribosomal protein S15 (Fragment) OS=Naegleria gruberi GN=RPS15
PE=2 SV=1
Length = 120
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%)
Query: 67 LDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEKPEVVKTHLRNMII 126
+ M ++L L RR +GI +K L++K +K + AP EKP+ VKTHLR+MII
Sbjct: 1 MAMENDELKNLFTSALRRIIGKGISKKYKTLIEKAQKKRDTAPYGEKPDAVKTHLRDMII 60
Query: 127 VPEMVGSVVGVYNGKTFNQVEIK 149
+P M+G V+GVY GK + VEIK
Sbjct: 61 LPSMIGCVIGVYQGKDYVSVEIK 83
>sp|A7I5P3|RS19_METB6 30S ribosomal protein S19 OS=Methanoregula boonei (strain 6A8)
GN=rps19 PE=3 SV=1
Length = 139
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 10/105 (9%)
Query: 46 TQKK-KRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKA 104
TQK+ R +FT+RG +D+L M +L+ LM RARR+F RG+ R L++K+R
Sbjct: 7 TQKRMPRRREEFTYRGYKIDELKAMGLSELIPLMPARARRKFNRGLNRGEETLLEKIRGG 66
Query: 105 KKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
E ++THLR MI++PEM+G + +YNGK F +VE +
Sbjct: 67 D---------EKIRTHLREMIVMPEMIGKSIEIYNGKEFLKVEFQ 102
>sp|A3CT01|RS19_METMJ 30S ribosomal protein S19 OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=rps19 PE=3 SV=1
Length = 137
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 10/108 (9%)
Query: 43 VEETQKK-KRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKL 101
++TQK+ R +FT+RG + L M +L+ LM RARR+F RG+ R+ L+ L
Sbjct: 2 AKKTQKRMPRRREEFTYRGYSVADLQQMALSELLPLMPARARRKFDRGLSREHEKLLADL 61
Query: 102 RKAKKEAPPNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
R E ++THLR+MII+PEMVG + ++NGK F +VEI+
Sbjct: 62 RSGD---------ENIRTHLRDMIIMPEMVGRSIEIHNGKEFQKVEIQ 100
>sp|B1YD00|RS19_PYRNV 30S ribosomal protein S19 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rps19 PE=3 SV=1
Length = 158
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 63/93 (67%), Gaps = 1/93 (1%)
Query: 56 FTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEKPE 115
F +RG L++LL++P ++ ++L+ R RR RG+K + L++K+RKAK+ A +K
Sbjct: 29 FRYRGKTLEELLNLPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKK-V 87
Query: 116 VVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
+KTH R+MII+PEMVG + VYNG T+ V I
Sbjct: 88 TIKTHSRDMIILPEMVGLTIHVYNGITYIPVFI 120
>sp|Q5JDH3|RS19_PYRKO 30S ribosomal protein S19 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps19 PE=3 SV=1
Length = 133
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 54 RKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNEK 113
++F +RG LD+LL+M E+ +L+ R RR RG+ + L++K+R AKK K
Sbjct: 5 KEFRYRGYTLDELLNMSLEEFAKLLPSRQRRSLKRGLSPEQKKLLRKIRLAKKGK--YNK 62
Query: 114 PEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
P ++TH R+MI++PEMVG + VYNGK F VEIK
Sbjct: 63 P--IRTHSRDMIVLPEMVGMTIHVYNGKEFVPVEIK 96
>sp|Q8TWP2|RS19_METKA 30S ribosomal protein S19 OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps19 PE=3 SV=1
Length = 149
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 68/100 (68%)
Query: 50 KRTFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAP 109
++ + +F +RG L +L+ MP E+ +EL+ R RR RG+ + L++K+R+A++
Sbjct: 15 EKEWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRGLPSRHKKLLRKVRRARRLLR 74
Query: 110 PNEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEIK 149
+KP V++TH R+MII+PEMVG + VYNGK F +V+I+
Sbjct: 75 RGKKPPVIRTHCRDMIILPEMVGLTIAVYNGKEFKEVKIE 114
>sp|A3MTT6|RS19_PYRCJ 30S ribosomal protein S19 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rps19 PE=3 SV=1
Length = 158
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
+ F +RG L++LL+MP ++ ++L+ R RR RG+K + L++K+RKAK+ +
Sbjct: 26 WGSFRYRGKTLEELLNMPMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLMAQGK 85
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K +KTH R+MII+PEMVG + VYNG T+ V I
Sbjct: 86 K-VTIKTHCRDMIILPEMVGLTIHVYNGITYIPVFI 120
>sp|Q8ZWL4|RS19_PYRAE 30S ribosomal protein S19 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=rps19 PE=3 SV=1
Length = 158
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 64/96 (66%), Gaps = 1/96 (1%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
+ F +RG L++LL+M ++ ++L+ R RR RG+K + L++K+RKAK+ A +
Sbjct: 26 WATFRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGK 85
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
K V++TH R+MII+PEMVG + VYNG T+ V I
Sbjct: 86 K-VVIRTHCRDMIILPEMVGLTIHVYNGITYIPVFI 120
>sp|Q9YF74|RS19_AERPE 30S ribosomal protein S19 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps19 PE=3
SV=3
Length = 144
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKK--EAPP 110
++KF +RG L++LL M E+L L R RR RG+ L+ K+RK ++ E
Sbjct: 9 WKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRGLTPAQQKLLLKVRKIRRRLEEGR 68
Query: 111 NEKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
++P V++TH+R+M+I+PEMVG + VYNGK F V+I
Sbjct: 69 LKRPPVIRTHVRDMVILPEMVGLTIAVYNGKEFIPVKI 106
>sp|A8AA18|RS19_IGNH4 30S ribosomal protein S19 OS=Ignicoccus hospitalis (strain KIN4/I /
DSM 18386 / JCM 14125) GN=rps19 PE=3 SV=1
Length = 139
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Query: 52 TFRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPN 111
++KF +RG L++LL+MP + +EL+ R RR RG L++K+ KA+KE
Sbjct: 6 AWKKFRYRGKTLEELLEMPLDDFIELLPARQRRSLKRGFNDAQRRLLEKVLKARKEMEKG 65
Query: 112 EKPEVVKTHLRNMIIVPEMVGSVVGVYNGKTFNQVEI 148
+K + ++TH+R+M+I+P MVG + VYNGK F V+I
Sbjct: 66 KKVK-IRTHVRDMVILPIMVGLTIEVYNGKEFVPVKI 101
>sp|Q9UXA3|RS19_SULSO 30S ribosomal protein S19 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps19 PE=3 SV=1
Length = 140
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 53 FRKFTFRGVDLDQLLDMPTEQLMELMHCRARRRFARGIKRKPMALVKKLRKAKKEAPPNE 112
++ F +RG +D+LL+MP ++ ++L+ R RR RG L++K+RK ++E N
Sbjct: 9 WKNFKYRGKSIDELLNMPMDEFIKLLPSRQRRSLKRGFTDAQRHLLEKVRKYRREGKFN- 67
Query: 113 KPEVVKTHLRNMIIVPEMVGSVVGVYNGKTF 143
+ +KTH+RN++I+PE++G + VYNGK F
Sbjct: 68 --KTIKTHVRNLVILPELIGLKMAVYNGKEF 96
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,256,622
Number of Sequences: 539616
Number of extensions: 1959306
Number of successful extensions: 6412
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 344
Number of HSP's that attempted gapping in prelim test: 5623
Number of HSP's gapped (non-prelim): 1012
length of query: 149
length of database: 191,569,459
effective HSP length: 107
effective length of query: 42
effective length of database: 133,830,547
effective search space: 5620882974
effective search space used: 5620882974
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)