BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2144
(423 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 184/425 (43%), Gaps = 31/425 (7%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
+P P +WP+ G+L+ I +GG K+ H + + H++ G I++ K+G ++ L + +
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEA 85
Query: 84 VFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQE 143
++ E +P+ + + W+ YR GL ++G EW + R K L+K +
Sbjct: 86 LYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDK 145
Query: 144 LTKELFKAFEHDIVESTKANNK-PIIIAHMLGTPFIS------------HYKELSKEIHD 190
E+ F + E + P + + + F S KE +E
Sbjct: 146 KINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALT 205
Query: 191 LSQVVHKIFEHSAALSMLPINLSIKLKLSAW---TKFVESVHQSLA-LASELLHKMEPFN 246
+ + + + P+ L +L W T +++ +S+ L +
Sbjct: 206 FITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQP 265
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ 306
G + + +++S + + V + LAA +TTA S WI Y L R+P Q +L QE+Q
Sbjct: 266 GADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ 325
Query: 307 ---------KNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXX 357
+ D N + ++E +R+ P PF TR + K + Y +PKG
Sbjct: 326 SVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTL 385
Query: 358 XXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ F +F+P RW + K + P+A LP+ +G R C+GR+LA+ Q+
Sbjct: 386 NTQVLGSSEDNFEDSHKFRPERWLQKEKK-----INPFAHLPFGIGKRMCIGRRLAELQL 440
Query: 418 CLTIA 422
L +
Sbjct: 441 HLALC 445
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 185/421 (43%), Gaps = 40/421 (9%)
Query: 35 TLISILKEGGGKQLH-RYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKVFALEGTYPK 93
L +E G +++H R++E Q+ GPIY+EK+G +E+ ++ DV +F EG+YP+
Sbjct: 23 NLYHFWREKGSQRIHFRHIEN-FQKYGPIYREKLGNLESVYIIHPEDVAHLFKFEGSYPE 81
Query: 94 HILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL----------------KNYS 137
W Y + Y G+ F W K R ++N ++ +++
Sbjct: 82 RYDIPPWLAYHRYYQKPIGVLFKKSGTWKKDRVVLNTEVMAPEAIKNFIPLLNPVSQDFV 141
Query: 138 AGPQQELTKELFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHK 197
+ + + ++ F DI E I M G + ++ E V+K
Sbjct: 142 SLLHKRIKQQGSGKFVGDIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAVYK 201
Query: 198 IFEHSAALSMLPINLSIKLKLSAW--------TKFVESVHQSLALASELLHKMEPFNGDG 249
+F S L +P L + W T F ++ + +L K E N G
Sbjct: 202 MFHTSVPLLNVPPELYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKTEFRNYPG 261
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNN 309
+ L + E + E ++ + + + +TT+++ QW Y + R +VQ+ L +E+
Sbjct: 262 ILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNAR 321
Query: 310 DCLNNEI---------INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
+I + I+E LR++PI+ + R+ D+ ++ YLIP
Sbjct: 322 RQAEGDISKMLQMVPLLKASIKETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIY 381
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+PA+F SP++F P+RW +K I+ + +L + G R CVGR++A+ +M L
Sbjct: 382 AMGRDPAFFSSPDKFDPTRW-LSKDKDLIH----FRNLGFGWGVRQCVGRRIAELEMTLF 436
Query: 421 I 421
+
Sbjct: 437 L 437
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 185/437 (42%), Gaps = 50/437 (11%)
Query: 24 IPTP--RSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADV 81
IP+P W L +E G ++H + + Q+ GPIY+EK+G VE+ ++ D DV
Sbjct: 8 IPSPGDNGWL---NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDV 64
Query: 82 RKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL-----KNY 136
+F EG P+ L W Y + Y G+ W K R +N+ ++ KN+
Sbjct: 65 ALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF 124
Query: 137 SAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHMLG-------TPFISHYKE------ 183
P + F + H ++ + N I+ L T I ++
Sbjct: 125 L--PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEV 182
Query: 184 LSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALAS------- 236
++ E ++++F S + LP +L + W V + + A
Sbjct: 183 VNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFY 242
Query: 237 -ELLHKMEPFNG-DGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
EL K + G+ +L +S E I+ V + + DTT+++ QW Y + R+
Sbjct: 243 WELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN 302
Query: 295 PSVQDQLYQEL-----QKNNDCLNN----EIINHVIREGLRMYPIAPFITRFMPKDVEIR 345
VQD L E+ Q D ++ I+E LR++PI+ + R++ D+ +R
Sbjct: 303 LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLR 362
Query: 346 GYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW-KRDANKKYINVVEPYASLPYAMGA 404
Y+IP P +F PE F P+RW +D N Y + +L + G
Sbjct: 363 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY------FRNLGFGWGV 416
Query: 405 RSCVGRKLAQTQMCLTI 421
R C+GR++A+ +M + +
Sbjct: 417 RQCLGRRIAELEMTIFL 433
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 184/435 (42%), Gaps = 50/435 (11%)
Query: 24 IPTP--RSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADV 81
IP+P W L +E G ++H + + Q+ GPIY+EK+G VE+ ++ D DV
Sbjct: 11 IPSPGDNGWL---NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDV 67
Query: 82 RKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL-----KNY 136
+F EG P+ L W Y + Y G+ W K R +N+ ++ KN+
Sbjct: 68 ALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNF 127
Query: 137 SAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHMLG-------TPFISHYKE------ 183
P + F + H ++ + N I+ L T I ++
Sbjct: 128 L--PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEV 185
Query: 184 LSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALAS------- 236
++ E ++++F S + LP +L + W V + + A
Sbjct: 186 VNPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFY 245
Query: 237 -ELLHKMEPFNG-DGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
EL K + G+ +L +S E I+ V + + DTT+++ QW Y + R+
Sbjct: 246 WELRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARN 305
Query: 295 PSVQDQLYQEL-----QKNNDCLNN----EIINHVIREGLRMYPIAPFITRFMPKDVEIR 345
VQD L E+ Q D ++ I+E LR++PI+ + R++ D+ +R
Sbjct: 306 LKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLR 365
Query: 346 GYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW-KRDANKKYINVVEPYASLPYAMGA 404
Y+IP P +F PE F P+RW +D N Y + +L + G
Sbjct: 366 DYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITY------FRNLGFGWGV 419
Query: 405 RSCVGRKLAQTQMCL 419
R C+GR++A+ +M +
Sbjct: 420 RQCLGRRIAELEMTI 434
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 173/410 (42%), Gaps = 41/410 (10%)
Query: 36 LISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKVFALEGTYPKHI 95
L+ I +E G + LH + + QELGPI++ +G + DV K+ ++ +P +
Sbjct: 26 LLQIWREQGYEHLHLEMHQTFQELGPIFRYNLGGPRMVCVMLPEDVEKLQQVDSLHPCRM 85
Query: 96 LPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSA--------GPQQELTKE 147
+ + W YR+ G G++ ++GPEW R +N +L + ++ ++
Sbjct: 86 ILEPWVAYRQHRGHKCGVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQA 145
Query: 148 LFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKEL--------SKEIHDLSQVVHKIF 199
L K + S + +P I + + ++ + E S + + +F
Sbjct: 146 LKKKVLQNARGSLTLDVQPSIFHYTIEASNLALFGERLGLVGHSPSSASLNFLHALEVMF 205
Query: 200 EHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKM-------EPFNGDGLSS 252
+ + L +P +LS + W + E+ + K+ P + G+ +
Sbjct: 206 KSTVQLMFMPRSLSRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVA 265
Query: 253 KLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCL 312
+L +S E+I+ ++ + DTTA + L R+P VQ L QE +
Sbjct: 266 ELLLKAELSLEAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASI 325
Query: 313 NNE---------IINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXX 363
+ ++ ++E LR+YP+ F+ R + D+ ++ Y IP G
Sbjct: 326 SEHPQKATTELPLLRAALKETLRLYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLG 385
Query: 364 HNPAYFPSPEQFQPSRWK--RDANKKYINVVEPYASLPYAMGARSCVGRK 411
N A FP PE++ P RW R + + + +V P+ G R C+GR+
Sbjct: 386 RNAALFPRPERYNPQRWLDIRGSGRNFHHV-------PFGFGMRQCLGRR 428
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 270 IDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINHV 320
I FI A +TT+ +I Y L HP VQ +L +E+ + L E ++ V
Sbjct: 279 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMV 338
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
+ E LR++PIA + R KDVEI G IPKG +P Y+ PE+F P R+
Sbjct: 339 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 398
Query: 381 KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+KK + ++PY P+ G R+C+G + A M L + +
Sbjct: 399 ----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 437
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 270 IDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINHV 320
I FI A +TT+ +I Y L HP VQ +L +E+ + L E ++ V
Sbjct: 280 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMV 339
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
+ E LR++PIA + R KDVEI G IPKG +P Y+ PE+F P R+
Sbjct: 340 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 399
Query: 381 KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+KK + ++PY P+ G R+C+G + A M L + +
Sbjct: 400 ----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 438
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 270 IDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINHV 320
I FI A +TT+ +I Y L HP VQ +L +E+ + L E ++ V
Sbjct: 278 IIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMV 337
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
+ E LR++PIA + R KDVEI G IPKG +P Y+ PE+F P R+
Sbjct: 338 VNETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF 397
Query: 381 KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+KK + ++PY P+ G R+C+G + A M L + +
Sbjct: 398 ----SKKNKDNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 436
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 176/465 (37%), Gaps = 105/465 (22%)
Query: 21 SKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTAD 80
K+ P P PI G L + + K R Q GP++ +G ++
Sbjct: 9 GKLPPGPFPLPIIGNLFQLELKNIPKSFTRLA----QRFGPVFTLYVGSQRMVVMHGYKA 64
Query: 81 VRKV-------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL 133
V++ F+ G P + +R DRG+ F +GP W R+ + L
Sbjct: 65 VKEALLDYKDEFSGRGDLP------AFHAHR-----DRGIIFNNGPTWKDIRR-FSLTTL 112
Query: 134 KNYSAGPQQELTKELFKAFEHDIVEST-KANNKPI------------IIA---------- 170
+NY G Q ++ +A H ++E+ K +P +IA
Sbjct: 113 RNYGMGKQGNESRIQREA--HFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFRKHFDY 170
Query: 171 ----------------HMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSI 214
H+L TP++ Y +H L K+ ++ A +
Sbjct: 171 NDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVK-------- 222
Query: 215 KLKLSAWTKFVESVHQSLA------LASELLHKMEPFNGDGLSSKLKEVENVSPESIRRM 268
++ V+ HQSL L LL +ME K + + I
Sbjct: 223 ----EYVSERVKEHHQSLDPNCPRDLTDCLLVEME-------KEKHSAERLYTMDGITVT 271
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V D A +TT+ + ++ +L ++P ++++L++E+ + D ++
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDA 331
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
V+ E R + P + +D RGYLIPKG ++ FP PE+F+P
Sbjct: 332 VVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPE 391
Query: 379 RWKRDANK-KYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
+ + K KY + +P+++ G R C G LA+ ++ L +
Sbjct: 392 HFLNENGKFKYSDYFKPFST-----GKRVCAGEGLARMELFLLLC 431
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 178/442 (40%), Gaps = 65/442 (14%)
Query: 29 SWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKVFALE 88
S P+ G+L + + G +H K ++ GPIY ++G + ++V +
Sbjct: 15 SLPLVGSLPFLPRHG---HMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKK 71
Query: 89 GT----YPKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRKI-MNKYLLKNYSAGPQQ 142
G P+ RK G+ F D G W +R++ M + L + G Q
Sbjct: 72 GKDFSGRPQMATLDIASNNRK------GIAFADSGAHWQLHRRLAMATFAL--FKDG-DQ 122
Query: 143 ELTKELFKAFEHDIVESTKANNKPIIIAHMLGTP---------FISHYKELSKEIHDLSQ 193
+L K + + N + I I+ + F + YK E++ +
Sbjct: 123 KLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQN 182
Query: 194 VVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKM-----EPFNGD 248
I ++ + S+ ++L LK+ K +E + + + ++LL+K+ E F D
Sbjct: 183 YNEGIIDNLSKDSL--VDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKFRSD 239
Query: 249 GLSSKL------------------KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYL 290
+++ L ++ E +S I + D A +TT +W
Sbjct: 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAF 299
Query: 291 LGRHPSVQDQLYQELQKN---------NDCLNNEIINHVIREGLRMYPIAPFITRFMPK- 340
L +P V+ +LY+E+ +N +D ++ IRE LR+ P+AP +
Sbjct: 300 LLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV 359
Query: 341 DVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPY 400
D I + + KG HN + P+QF P R+ A + I+ Y LP+
Sbjct: 360 DSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSY--LPF 417
Query: 401 AMGARSCVGRKLAQTQMCLTIA 422
G RSC+G LA+ ++ L +A
Sbjct: 418 GAGPRSCIGEILARQELFLIMA 439
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 166/421 (39%), Gaps = 37/421 (8%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHR---YVEKRHQELGPIYKEKIGPVEAYFLNDTADV 81
P R P+ G + +L G G +L R + ++ G + + K+GP Y + + ++
Sbjct: 19 PELREPPVAGGGVPLL--GHGWRLARDPLAFMSQLRDHGDVVRIKLGPKTVYAVTNP-EL 75
Query: 82 RKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRK-IMNKYLLKNYSA-G 139
AL Y HI WE L G + G+ +GP + R+ I + L A G
Sbjct: 76 TGALALNPDY--HIAGPLWESLEGLLGKE-GVATANGPLHRRQRRTIQPAFRLDAIPAYG 132
Query: 140 P-QQELTKELFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHKI 198
P +E L + ++ ++ A ++ +A + + + + + L + +
Sbjct: 133 PIMEEEAHALTERWQPG--KTVDATSESFRVAVRVAARCLLRGQYMDERAERLCVALATV 190
Query: 199 FEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKE 256
F ++P+ +L L A +F +++ L E++ + D L + L E
Sbjct: 191 FRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQKPDDLLTALLE 250
Query: 257 VEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNN-- 309
++ + + I V+ + +T A + W+ L HP D++ E++
Sbjct: 251 AKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG 310
Query: 310 ------DCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXX 363
D +VI E +R+ P +TR + E+ GY IP G
Sbjct: 311 RPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQ 370
Query: 364 HNPAYFPSPEQFQPSRW--KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTI 421
+P + +F P RW +R AN V YA P++ G R C + Q+ L
Sbjct: 371 RDPKSYDDNLEFDPDRWLPERAAN------VPKYAMKPFSAGKRKCPSDHFSMAQLTLIT 424
Query: 422 A 422
A
Sbjct: 425 A 425
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 17/167 (10%)
Query: 259 NVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ--------KNND 310
+++ E++ + +++ ++AA DT ++S ++ +L+ +HP+V++ + +E+Q K +D
Sbjct: 290 DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKIDD 349
Query: 311 CLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFP 370
+++ + I E +R P+ + R +D I GY + KG H +FP
Sbjct: 350 IQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKG-TNIILNIGRMHRLEFFP 408
Query: 371 SPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P +F + ++ +Y P+ G R C G+ +A M
Sbjct: 409 KPNEFTLENFAKNVPYRYFQ--------PFGFGPRGCAGKYIAMVMM 447
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 21/196 (10%)
Query: 234 LASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR 293
L L +ME G+ SS + E++R +V D A TT+ + W L+
Sbjct: 249 LTEAFLAEMEKAKGNPESS-------FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMIL 301
Query: 294 HPSVQDQLYQELQ---------KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVE 343
HP VQ ++ QE+ + D + VI E R I P +T +D+E
Sbjct: 302 HPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIE 361
Query: 344 IRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMG 403
++G+ IPKG + A + P +F P + DA + V+P A LP++ G
Sbjct: 362 VQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL-DAQGHF---VKPEAFLPFSAG 417
Query: 404 ARSCVGRKLAQTQMCL 419
R+C+G LA+ ++ L
Sbjct: 418 RRACLGEPLARMELFL 433
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 21/196 (10%)
Query: 234 LASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR 293
L L +ME G+ SS + E++R +V D A TT+ + W L+
Sbjct: 249 LTEAFLAEMEKAKGNPESS-------FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMIL 301
Query: 294 HPSVQDQLYQELQ---------KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVE 343
HP VQ ++ QE+ + D + VI E R I P +T +D+E
Sbjct: 302 HPDVQRRVQQEIDDVIGQVRRPEMGDQAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIE 361
Query: 344 IRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMG 403
++G+ IPKG + A + P +F P + DA + V+P A LP++ G
Sbjct: 362 VQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFL-DAQGHF---VKPEAFLPFSAG 417
Query: 404 ARSCVGRKLAQTQMCL 419
R+C+G LA+ ++ L
Sbjct: 418 RRACLGEPLARMELFL 433
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V+ A +TT+ + ++ F L+ ++P V +++ +E+++ +D +
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R+ + PF + + KD + RGY+IPK H+P YF +P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ DAN + +P+++G R C+G +A+T++ L
Sbjct: 393 HFL-DANGA---LKRNEGFMPFSLGKRICLGEGIARTELFL 429
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V+ A +TT+ + ++ F L+ ++P V +++ +E+++ +D +
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R+ + PF + + KD + RGY+IPK H+P YF +P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ DAN + +P+++G R C+G +A+T++ L
Sbjct: 393 HFL-DANGA---LKRNEGFMPFSLGKRICLGEGIARTELFL 429
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V+ A +TT+ + ++ F L+ ++P V +++ +E+++ +D +
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R+ + PF + + KD + RGY+IPK H+P YF +P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ DAN + +P+++G R C+G +A+T++ L
Sbjct: 393 HFL-DANGA---LKRNEGFMPFSLGKRICLGEGIARTELFL 429
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V+ A +TT+ + ++ F L+ ++P V +++ +E+++ +D +
Sbjct: 273 VLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R+ + PF + + KD + RGY+IPK H+P YF +P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ DAN + +P+++G R C G +A+T++ L
Sbjct: 393 HFL-DANGA---LKRNEGFMPFSLGKRICAGEGIARTELFL 429
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNN 309
L+++ + +S ++ ++ + A +T + LLG+H +++++ QE +N
Sbjct: 229 LAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQE--QNK 286
Query: 310 DCLNNEI----------INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXX 359
L+ E+ ++ V++E LR+ P R + +D + +G+ PKG
Sbjct: 287 LQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQI 346
Query: 360 XXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+P +P PE+F P R+ D + + P+A +P+ G R C+G++ A+ +M L
Sbjct: 347 SQTHADPDLYPDPEKFDPERFTPDGSATH---NPPFAHVPFGGGLRECLGKEFARLEMKL 403
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 79/161 (49%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINH 319
V+ A +TT+ + ++ F L+ ++P V +++ +E+++ +D +
Sbjct: 273 VLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R+ + PF + + KD + RGY+IPK H+P YF +P F P
Sbjct: 333 VIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPG 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ DAN + +P+++G R C+G +A+T++ L
Sbjct: 393 HFL-DANGA---LKRNEGFMPFSLGKRICLGEGIARTELFL 429
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 171/442 (38%), Gaps = 49/442 (11%)
Query: 22 KVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADV 81
K P P WP+ G ++++ GK H + + Q G + + +IG L+ +
Sbjct: 16 KSPPEPWGWPLLGHVLTL-----GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTI 70
Query: 82 RKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKI----MNKYLLKNYS 137
R+ +G K P + G GP W R++ +N + + +
Sbjct: 71 RQALVRQGDDFKG-RPDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASDP 129
Query: 138 AGP-----QQELTKELFKAFEHDIVESTKA-------NNKPIIIAHMLGT-PFISHYKEL 184
A ++ ++KE KA + E N + +A+++G F H+ E
Sbjct: 130 ASSSSCYLEEHVSKEA-KALISRLQELMAGPGHFDPYNQVVVSVANVIGAMCFGQHFPES 188
Query: 185 SKEIHDLSQVVHKIFEHSAA---LSMLPI-----NLSIKLKLSAWTKFVESVHQSLALAS 236
S E+ L + H+ E +++ L PI N +++ + +F+ + +++
Sbjct: 189 SDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHY 248
Query: 237 ELLHKMEPFNGDGLSSKL-----KEVENVSP-ESIRRMVIDFILAAGDTTAISTQWIFYL 290
+ K + G K + N+ P E I +V D A DT + W
Sbjct: 249 QDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMY 308
Query: 291 LGRHPSVQDQLYQELQ---------KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPK 340
L P +Q ++ +EL + +D + I E R PF I +
Sbjct: 309 LVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTR 368
Query: 341 DVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPY 400
D + G+ IPK H+P + P +F+P R+ A+ IN + +
Sbjct: 369 DTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERF-LTADGTAINKPLSEKMMLF 427
Query: 401 AMGARSCVGRKLAQTQMCLTIA 422
MG R C+G LA+ ++ L +A
Sbjct: 428 GMGKRRCIGEVLAKWEIFLFLA 449
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 176/444 (39%), Gaps = 63/444 (14%)
Query: 21 SKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLND--- 77
K+ P P +PI G ++ I K + + + K + GP++ +G L+
Sbjct: 9 GKLPPGPTPFPIIGNILQI----DAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYEA 64
Query: 78 ----TADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL 133
D+ + FA G+ P EK K G+ F + W + R+ + L
Sbjct: 65 VKEALVDLGEEFAGRGSVP------ILEKVSK----GLGIAFSNAKTWKEMRR-FSLMTL 113
Query: 134 KNYSAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHMLGTP---------FISHYKEL 184
+N+ G ++ + + + + E K N P +LG F + +
Sbjct: 114 RNFGMG-KRSIEDRIQEEARCLVEELRKTNASPCDPTFILGCAPCNVICSVIFHNRFDYK 172
Query: 185 SKEIHDLSQVVHKIFE------------HSAALSMLPINLSIKLKLSAWTKFVESVHQSL 232
+E L + +H+ E A L P LK + + K + + +
Sbjct: 173 DEEFLKLMESLHENVELLGTPWLQVYNNFPALLDYFPGIHKTLLKNADYIK--NFIMEKV 230
Query: 233 ALASELLHKMEPFNG-DGLSSKLKEVENV--SPESIRRMVIDFILAAGDTTAISTQWIFY 289
+LL P + D K+++ N+ + ES+ V D A +TT+ + ++
Sbjct: 231 KEHQKLLDVNNPRDFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLL 290
Query: 290 LLGRHPSVQDQLYQELQK-----NNDCLNNE----IINHVIREGLRMYPIAPF-ITRFMP 339
LL +HP V ++ +E+++ + C+ + + VI E R + P + +
Sbjct: 291 LLLKHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVT 350
Query: 340 KDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLP 399
+DV R Y IPKG H+ FP+P+ F P + ++ N + +P
Sbjct: 351 RDVRFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESG----NFKKSDYFMP 406
Query: 400 YAMGARSCVGRKLAQTQMCLTIAQ 423
++ G R CVG LA+ ++ L +
Sbjct: 407 FSAGKRMCVGEGLARMELFLFLTS 430
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 263 ESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK--NND---CLNNE-- 315
E++ + D A+ DT + + QW+ L R+P VQ ++ EL + D C+ ++
Sbjct: 278 ENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRLPCMGDQPN 337
Query: 316 --IINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSP 372
+ + E +R P I + + GY IPK H+P +P+P
Sbjct: 338 LPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNP 397
Query: 373 EQFQPSRW-KRDA--NKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
E F P+R+ +D NK + V + +++G R C+G +L++ Q+ L I+
Sbjct: 398 ENFDPARFLDKDGLINKDLTSRV-----MIFSVGKRRCIGEELSKMQLFLFIS 445
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 164/421 (38%), Gaps = 73/421 (17%)
Query: 49 HRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK--VFALEGTYPKHILPQCWEKYRKL 106
H Y+ K+ Q G I+ +G + LN V++ V E + LP + K K+
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP-LFMKMTKM 95
Query: 107 YGCDRGLYFMDGPEWMKYRKI-MNKYLLKNYSAGPQQELTKELFKAFEHDIVESTKANNK 165
G Y G W+ +R++ +N + Y K+FE I+E TK N
Sbjct: 96 GGLLNSRY---GRGWVDHRRLAVNSFRYFGYGQ-----------KSFESKILEETKFFND 141
Query: 166 PIIIAHMLGTPFISHYKEL-SKEIHDLSQVV---------HKIFEHSAALSMLPINLSIK 215
I G PF +K+L + + +++ ++ F+H L + L+
Sbjct: 142 AI--ETYKGRPF--DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAAS 197
Query: 216 LKLSAWTKFV----------ESVHQSLALASELL-----------------HKMEPFNGD 248
+ + F + + ++ A+ + L H ++ + +
Sbjct: 198 ASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDE 257
Query: 249 GLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ-- 306
K S E++ V + I+A +TT +W + +P++Q Q+ +E+
Sbjct: 258 MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 307 -------KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXX 358
+D V+ E LR I P I +D +RGY IPKG
Sbjct: 318 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 359 XXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMC 418
+ Y+ PE F P R+ D++ + + A +P+++G R C+G LA+ +M
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERF-LDSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMF 433
Query: 419 L 419
L
Sbjct: 434 L 434
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 164/421 (38%), Gaps = 73/421 (17%)
Query: 49 HRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK--VFALEGTYPKHILPQCWEKYRKL 106
H Y+ K+ Q G I+ +G + LN V++ V E + LP + K K+
Sbjct: 37 HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLP-LFMKMTKM 95
Query: 107 YGCDRGLYFMDGPEWMKYRKI-MNKYLLKNYSAGPQQELTKELFKAFEHDIVESTKANNK 165
G Y G W+ +R++ +N + Y K+FE I+E TK N
Sbjct: 96 GGLLNSRY---GRGWVDHRRLAVNSFRYFGYGQ-----------KSFESKILEETKFFND 141
Query: 166 PIIIAHMLGTPFISHYKEL-SKEIHDLSQVV---------HKIFEHSAALSMLPINLSIK 215
I G PF +K+L + + +++ ++ F+H L + L+
Sbjct: 142 AI--ETYKGRPF--DFKQLITNAVSNITNLIIFGERFTYEDTDFQHMIELFSENVELAAS 197
Query: 216 LKLSAWTKFV----------ESVHQSLALASELL-----------------HKMEPFNGD 248
+ + F + + ++ A+ + L H ++ + +
Sbjct: 198 ASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQHFVDAYLDE 257
Query: 249 GLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ-- 306
K S E++ V + I+A +TT +W + +P++Q Q+ +E+
Sbjct: 258 MDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLI 317
Query: 307 -------KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXX 358
+D V+ E LR I P I +D +RGY IPKG
Sbjct: 318 MGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITN 377
Query: 359 XXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMC 418
+ Y+ PE F P R+ D++ + + A +P+++G R C+G LA+ +M
Sbjct: 378 LYSVHFDEKYWRDPEVFHPERF-LDSSGYF---AKKEALVPFSLGRRHCLGEHLARMEMF 433
Query: 419 L 419
L
Sbjct: 434 L 434
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINH 319
++ A +T + + ++ F LL +HP V+ ++++E+ K D +
Sbjct: 273 TLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R + P + R + KD + R + +PKG +P++F +P+ F P
Sbjct: 333 VIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + + A +P+++G R+C G LA+ ++ L
Sbjct: 393 HFLNEKGQ----FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/453 (19%), Positives = 178/453 (39%), Gaps = 78/453 (17%)
Query: 21 SKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTAD 80
K+ P P P+ G ++ I G K + + + + GP++ G L+
Sbjct: 10 GKLPPGPTPLPVIGNILQI----GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEA 65
Query: 81 VRKVFALEGT--YPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSA 138
V++ G + I P R G+ F +G +W + R+ + L+N+
Sbjct: 66 VKEALIDLGEEFSGRGIFPLAERANRGF-----GIVFSNGKKWKEIRR-FSLMTLRNFGM 119
Query: 139 GPQ--QELTKELFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVH 196
G + ++ +E + ++ ++ + P I I S + H
Sbjct: 120 GKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVIC------------SIIFH 167
Query: 197 KIFEHSAA--LSML-PINLSIKLKLSAWTK----------FVESVHQSLA-----LASEL 238
K F++ L+++ +N +IK+ S W + + H L + S +
Sbjct: 168 KRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYI 227
Query: 239 LHKMEPFNG-----------DGLSSKLKEVENVSP-----ESIRRMVIDFILAAGDTTAI 282
L K++ D K+++ ++ P ES+ +D A +TT+
Sbjct: 228 LEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTST 287
Query: 283 STQWIFYLLGRHPSVQDQLYQELQK-----NNDCLNN-------EIINHVIREGLRMYPI 330
+ ++ LL +HP V ++ +E+++ + C+ + + + H ++ + + P
Sbjct: 288 TLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPT 347
Query: 331 APFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYIN 390
+ + + D++ R YLIPKG H+ FP+PE F P + + N
Sbjct: 348 S--LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGG----N 401
Query: 391 VVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+ +P++ G R CVG LA ++ L +
Sbjct: 402 FKKSKYFMPFSAGKRICVGEALAGMELFLFLTS 434
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/437 (19%), Positives = 172/437 (39%), Gaps = 56/437 (12%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P+ G ++ I G K + + + + GP++ G L+ V++
Sbjct: 12 PGPTPLPVIGNILQI----GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEA 67
Query: 85 FALEGT--YPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQ 142
G + I P R G+ F +G +W + R+ + L+N+ G ++
Sbjct: 68 LIDLGEEFSGRGIFPLAERANRGF-----GIVFSNGKKWKEIRR-FSLMTLRNFGMG-KR 120
Query: 143 ELTKELFKAFEHDIVESTKANNKPIIIAHMLGTP--------------------FISHYK 182
+ + + + E K P +LG F++ +
Sbjct: 121 SIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLME 180
Query: 183 ELSKEIHDLSQVVHKIFEH-SAALSMLPINLSIKLKLSAWTK--FVESV--HQSLALASE 237
+L++ I LS +++ + A L P + LK A+ K +E V HQ +
Sbjct: 181 KLNENIEILSSPWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNN 240
Query: 238 LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSV 297
++ F K + + ES+ +D A +TT+ + ++ LL +HP V
Sbjct: 241 PQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEV 300
Query: 298 QDQLYQELQK-----NNDCLNN-------EIINHVIREGLRMYPIAPFITRFMPKDVEIR 345
++ +E+++ + C+ + + + H ++ + + P + + + D++ R
Sbjct: 301 TAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS--LPHAVTCDIKFR 358
Query: 346 GYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGAR 405
YLIPKG H+ FP+PE F P + + N + +P++ G R
Sbjct: 359 NYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGG----NFKKSKYFMPFSAGKR 414
Query: 406 SCVGRKLAQTQMCLTIA 422
CVG LA ++ L +
Sbjct: 415 ICVGEALAGMELFLFLT 431
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 261 SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDC 311
S +++ + A +TT+ + ++ F L+ ++P V +++Y+E+++ +D
Sbjct: 265 SHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDR 324
Query: 312 LNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFP 370
VI E R + P + + + RGY+IPK H+P YF
Sbjct: 325 AKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFE 384
Query: 371 SPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
P+ F P + DAN + + A +P+++G R C+G +A+ ++ L
Sbjct: 385 KPDAFNPDHF-LDANGA---LKKTEAFIPFSLGKRICLGEGIARAELFL 429
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 58/274 (21%)
Query: 162 ANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAW 221
NN P II + GT H K L S ++ K+ EH ++ ++
Sbjct: 199 CNNFPTIIDYFPGT----HNKLLKNLAFMESDILEKVKEHQESMD-----------INNP 243
Query: 222 TKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPE-SIRRMVI---DFILAAG 277
F++ L KME KE +N E +I +VI D + A
Sbjct: 244 RDFIDC----------FLIKME-----------KEKQNQQSEFTIENLVITAADLLGAGT 282
Query: 278 DTTAISTQWIFYLLGRHPSVQDQLYQELQK-----NNDCLNN-------EIINHVIREGL 325
+TT+ + ++ LL +HP V ++ +E+++ + C+ + + + H ++ +
Sbjct: 283 ETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYI 342
Query: 326 RMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDAN 385
+ P + + + DV+ R YLIPKG H+ FP+PE F P + +
Sbjct: 343 DLIPTS--LPHAVTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGG 400
Query: 386 KKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
N + +P++ G R CVG LA+ ++ L
Sbjct: 401 ----NFKKSNYFMPFSAGKRICVGEGLARMELFL 430
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINH 319
++ + +T + + ++ F LL +HP V+ ++++E+ K D +
Sbjct: 273 TLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R + P + R + KD + R + +PKG +P++F +P+ F P
Sbjct: 333 VIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + + A +P+++G R+C G LA+ ++ L
Sbjct: 393 HFLNEKGQ----FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 274 LAAGDTTAIST--QWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINHVIR 322
L G T +ST ++ F LL +HP V+ ++++E+ K D + VI
Sbjct: 276 LFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIH 335
Query: 323 EGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWK 381
E R + P + R + KD + R + +PKG +P++F +P+ F P +
Sbjct: 336 EIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFL 395
Query: 382 RDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + A +P+++G R+C G LA+ ++ L
Sbjct: 396 NEKGQ----FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINH 319
+ + +T + + ++ F LL +HP V+ ++++E+ K D +
Sbjct: 273 TLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R + P + R + KD + R + +PKG +P++F +P+ F P
Sbjct: 333 VIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + + A +P+++G R+C G LA+ ++ L
Sbjct: 393 HFLNEKGQ----FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 14/161 (8%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINH 319
+ + +T + + ++ F LL +HP V+ ++++E+ K D +
Sbjct: 273 TLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R + P + R + KD + R + +PKG +P++F +P+ F P
Sbjct: 333 VIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + + A +P+++G R+C G LA+ ++ L
Sbjct: 393 HFLNEKGQ----FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 27/171 (15%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN------------NDCLNNEI 316
V+D + +TTA + W L HP +Q +L +EL + D +
Sbjct: 284 VVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPL 343
Query: 317 INHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQF 375
+N I E LR+ P+ P + + I GY IP+G + + P +F
Sbjct: 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEF 403
Query: 376 QPSRWKRDANKKYINVVEPYA---SLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+P R+ +EP A +L + GAR C+G LA+ ++ + +A+
Sbjct: 404 RPDRF-----------LEPGANPSALAFGCGARVCLGESLARLELFVVLAR 443
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 237 ELLHKMEPFNGDGLSSKLKEVENV-SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHP 295
E L + E D L+ LK E E + + F +A +T+A + L R P
Sbjct: 215 EALKRGEEVPADILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQP 274
Query: 296 SVQDQLYQELQKN---------NDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRG 346
+ +L E+ + D + ++ V++E LR+YP A R + ++ I G
Sbjct: 275 EIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDG 334
Query: 347 YLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARS 406
+P YF P F P R+ A K + P+++G RS
Sbjct: 335 VRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPR------FTYFPFSLGHRS 388
Query: 407 CVGRKLAQTQMCLTIAQ 423
C+G++ AQ ++ + +A+
Sbjct: 389 CIGQQFAQMEVKVVMAK 405
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 253 KLKEVENV--SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---- 306
+L E NV S E I +V+D A DT + W L +P VQ ++ +EL
Sbjct: 266 QLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIG 325
Query: 307 -----KNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXX 360
+ +D + + I E R PF I +D ++G+ IPKG
Sbjct: 326 RSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQW 385
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ + +P +F P R+ I+ V + + MG R C+G +A+ ++ L
Sbjct: 386 QINHDQKLWVNPSEFLPERFLTPDGA--IDKVLSEKVIIFGMGKRKCIGETIARWEVFLF 443
Query: 421 IA 422
+A
Sbjct: 444 LA 445
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P WP+ G ++++ GK H + + Q+ G + + +IG L+ +R+
Sbjct: 14 PGPWGWPLIGHMLTL-----GKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIRQA 68
Query: 85 FALEG 89
+G
Sbjct: 69 LVRQG 73
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +LH +P G+ L E+IR ++ F++A +TT+ +
Sbjct: 232 SGEQSDDLLTHMLHGKDPETGEPLDD----------ENIRYQIVTFLIAGHETTSGLLSF 281
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 282 TLYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 341
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 342 KEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 395
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 396 FKPFGNGQRACIGQQFALHEATLVLG 421
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 18/163 (11%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINH 319
++ A +T + + ++ F LL +HP V+ ++++E+ K D
Sbjct: 273 TLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEA 332
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPS 378
VI E R + P + + KD + R + +PKG +P +F +P F P
Sbjct: 333 VIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQ 392
Query: 379 RW--KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ K+ KK A +P+++G R C G LA+ ++ L
Sbjct: 393 HFLDKKGQFKK------SDAFVPFSIGKRYCFGEGLARMELFL 429
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +LH +P G+ L E+IR +I F++A +TT+ +
Sbjct: 227 SGEQSDDLLTHMLHGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLTF 276
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 277 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYA 336
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 337 KEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS------AIPQHA 390
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLG 416
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 48/269 (17%)
Query: 162 ANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAW 221
NN P++I GT H K L S + K+ EH A+L
Sbjct: 198 CNNFPLLIDCFPGT----HNKVLKNVALTRSYIREKVKEHQASLD--------------- 238
Query: 222 TKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTA 281
V+ L KME K + + E++ V D +A +TT+
Sbjct: 239 ------VNNPRDFIDCFLIKME-------QEKDNQKSEFNIENLVGTVADLFVAGTETTS 285
Query: 282 ISTQWIFYLLGRHPSVQDQLYQEL-----QKNNDCLNNE----IINHVIREGLRMYPIAP 332
+ ++ LL +HP V ++ +E+ + + C+ + + V+ E R + P
Sbjct: 286 TTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVP 345
Query: 333 F-ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW-KRDANKKYIN 390
+ + D + R YLIPKG H+ FP+P F P + ++ N K +
Sbjct: 346 TGVPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSD 405
Query: 391 VVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+P++ G R C G LA+ ++ L
Sbjct: 406 YF-----MPFSAGKRICAGEGLARMELFL 429
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 125/319 (39%), Gaps = 61/319 (19%)
Query: 113 LYFMDGPEWMKYRKIMNK-YLLKNYSA-GPQ-QELTKELFKAFEH-----DIVESTKANN 164
L + D PE RK++ K + ++ A P Q + E A E D+V+ T AN
Sbjct: 87 LLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVK-TFANA 145
Query: 165 KP-IIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTK 223
P ++I+ + G P E E D+++ + ++ + +AA + L
Sbjct: 146 VPSMVISDLFGVPV-----ERRAEFQDIAEAMMRVDQDAAATEAAGMRLG---------- 190
Query: 224 FVESVHQSLALASELLHKMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFILAAGDT 279
L +L+ + GD L S L E+ V + ++AA DT
Sbjct: 191 ---------GLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDT 241
Query: 280 TAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFM 338
TA LL P DQL L + + L + + + E LR I F R
Sbjct: 242 TACMIGLGTALLLDSP---DQLA--LLREDPSL----VGNAVEELLRYLTIGQFGGERVA 292
Query: 339 PKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASL 398
+DVE+ G I KG +PA+ PE+F +R P L
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHL 339
Query: 399 PYAMGARSCVGRKLAQTQM 417
+ GA C+G++LA+ ++
Sbjct: 340 AFGFGAHQCIGQQLARIEL 358
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 125/319 (39%), Gaps = 61/319 (19%)
Query: 113 LYFMDGPEWMKYRKIMNK-YLLKNYSA-GPQ-QELTKELFKAFEH-----DIVESTKANN 164
L + D PE RK++ K + ++ A P Q + E A E D+V+ T AN
Sbjct: 87 LLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVK-TFANA 145
Query: 165 KP-IIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTK 223
P ++I+ + G P E E D+++ + ++ + +AA + L
Sbjct: 146 VPSMVISDLFGVPV-----ERRAEFQDIAEAMMRVDQDAAATEAAGMRLG---------- 190
Query: 224 FVESVHQSLALASELLHKMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFILAAGDT 279
L +L+ + GD L S L E+ V + ++AA DT
Sbjct: 191 ---------GLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDT 241
Query: 280 TAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFM 338
TA LL P DQL L + + L + + + E LR I F R
Sbjct: 242 TACMIGLGTALLLDSP---DQLA--LLREDPSL----VGNAVEELLRYLTIGQFGGERVA 292
Query: 339 PKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASL 398
+DVE+ G I KG +PA+ PE+F +R P L
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHL 339
Query: 399 PYAMGARSCVGRKLAQTQM 417
+ GA C+G++LA+ ++
Sbjct: 340 AFGFGAHQCIGQQLARIEL 358
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 125/319 (39%), Gaps = 61/319 (19%)
Query: 113 LYFMDGPEWMKYRKIMNK-YLLKNYSA-GPQ-QELTKELFKAFEH-----DIVESTKANN 164
L + D PE RK++ K + ++ A P Q + E A E D+V+ T AN
Sbjct: 87 LLWQDEPEHTSDRKLLAKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVK-TFANA 145
Query: 165 KP-IIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTK 223
P ++I+ + G P E E D+++ + ++ + +AA + L
Sbjct: 146 VPSMVISDLFGVPV-----ERRAEFQDIAEAMMRVDQDAAATEAAGMRLG---------- 190
Query: 224 FVESVHQSLALASELLHKMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFILAAGDT 279
L +L+ + GD L S L E+ V + ++AA DT
Sbjct: 191 ---------GLLYQLVQERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDT 241
Query: 280 TAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFM 338
TA LL P DQL L + + L + + + E LR I F R
Sbjct: 242 TACMIGLGTALLLDSP---DQLA--LLREDPSL----VGNAVEELLRYLTIGQFGGERVA 292
Query: 339 PKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASL 398
+DVE+ G I KG +PA+ PE+F +R P L
Sbjct: 293 TRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITR-------------RPAPHL 339
Query: 399 PYAMGARSCVGRKLAQTQM 417
+ GA C+G++LA+ ++
Sbjct: 340 AFGFGAHQCIGQQLARIEL 358
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
PY G R+C+G++ A + L +
Sbjct: 390 FKPYGNGQRACIGQQFALHEATLVLG 415
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW-IFYLLGRHPSVQ---DQLY 302
G L + ++ +S + M++ + A T+ I+T W + +L+ HP + D+L+
Sbjct: 240 GGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLH 297
Query: 303 QEL-----QKNNDCLNNEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXX 355
+E+ Q N D + +E+ +RE +R P + R + +V++ Y++PKG
Sbjct: 298 KEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDII 357
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
H+ FP+P + P R ++ + +I + G C+G+K A
Sbjct: 358 ACSPLLSHHDEEAFPNPRLWDPERDEK-VDGAFIG---------FGAGVHKCIGQKFALL 407
Query: 416 QMCLTIA 422
Q+ +A
Sbjct: 408 QVKTILA 414
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 261 SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ-------DQLYQELQKNNDCLN 313
S + I M I + A T++ + W L RH D+LY + + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 314 NEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPS 371
+I + +V++E LR++P + R + E++G+ I +G P FP
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P F P+R+++ + +N + +P+ G CVG A Q+
Sbjct: 362 PHDFVPARYEQPRQEDLLN---RWTWIPFGAGRHRCVGAAFAIMQI 404
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 261 SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ-------DQLYQELQKNNDCLN 313
S + I M I + A T++ + W L RH D+LY + + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 314 NEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPS 371
+I + +V++E LR++P + R + E++G+ I +G P FP
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P F P+R+++ + +N + +P+ G CVG A Q+
Sbjct: 362 PHDFVPARYEQPRQEDLLN---RWTWIPFGAGRHRCVGAAFAIMQI 404
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW-IFYLLGRHPSVQ---DQLY 302
G L + ++ +S + M++ + A T+ I+T W + +L+ HP + D+L+
Sbjct: 234 GGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLH 291
Query: 303 QEL-----QKNNDCLNNEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXX 355
+E+ Q N D + +E+ +RE +R P + R + +V++ Y++PKG
Sbjct: 292 KEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDII 351
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
H+ FP+P + P R ++ + +I + G C+G+K A
Sbjct: 352 ACSPLLSHHDEEAFPNPRLWDPERDEK-VDGAFIG---------FGAGVHKCIGQKFALL 401
Query: 416 QMCLTIA 422
Q+ +A
Sbjct: 402 QVKTILA 408
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 261 SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ-------DQLYQELQKNNDCLN 313
S + I M I + A T++ + W L RH D+LY + + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 314 NEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPS 371
+I + +V++E LR++P + R + E++G+ I +G P FP
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P F P+R+++ + +N + +P+ G CVG A Q+
Sbjct: 362 PHDFVPARYEQPRQEDLLN---RWTWIPFGAGRHRCVGAAFAIMQI 404
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 12/166 (7%)
Query: 261 SPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ-------DQLYQELQKNNDCLN 313
S + I M I + A T++ + W L RH D+LY + + +
Sbjct: 242 SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHAL 301
Query: 314 NEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPS 371
+I + +V++E LR++P + R + E++G+ I +G P FP
Sbjct: 302 RQIPQLENVLKETLRLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPD 361
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P F P+R+++ + +N + +P+ G CVG A Q+
Sbjct: 362 PHDFVPARYEQPRQEDLLN---RWTWIPFGAGRHRCVGAAFAIMQI 404
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW-IFYLLGRHPSVQ---DQLY 302
G L + ++ +S + M++ + A T+ I+T W + +L+ HP + D+L+
Sbjct: 249 GGLLKAVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHLM--HPKNKKWLDKLH 306
Query: 303 QEL-----QKNNDCLNNEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXX 355
+E+ Q N D + +E+ +RE +R P + R + +V++ Y++PKG
Sbjct: 307 KEIDEFPAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDII 366
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
H+ FP+P + P R ++ + +I + G C+G+K A
Sbjct: 367 ACSPLLSHHDEEAFPNPRLWDPERDEK-VDGAFIG---------FGAGVHKCIGQKFALL 416
Query: 416 QMCLTIA 422
Q+ +A
Sbjct: 417 QVKTILA 423
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/249 (19%), Positives = 102/249 (40%), Gaps = 21/249 (8%)
Query: 183 ELSKEIHDLSQVVHKIFEHSAAL--SMLPINLSIKLKLSAWTKFVESVHQSLALASELLH 240
+L++++ L + F H+A L LP+ S + + A + + ++++ +
Sbjct: 170 QLNEKVAQLYADLDGGFSHAAWLLPGWLPLP-SFRRRDRAHREIKDIFYKAIQKRRQSQE 228
Query: 241 KMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQ 300
K++ L + K+ ++ + + M+I +LA T++ ++ W+ + L R ++Q +
Sbjct: 229 KIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKK 288
Query: 301 LYQELQKNNDCLNN------------EIINHVIREGLRMYPIAPFITRFMPKDVEIRGYL 348
Y L++ C N +++ I+E LR+ P + R + GY
Sbjct: 289 CY--LEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYT 346
Query: 349 IPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCV 408
IP G + F P R+ +D E +A +P+ G C+
Sbjct: 347 IPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS----GEKFAYVPFGAGRHRCI 402
Query: 409 GRKLAQTQM 417
G A Q+
Sbjct: 403 GENFAYVQI 411
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGKQFALHEATLVLG 415
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 278
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 279 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 338
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 392
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLG 418
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 276
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 277 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 336
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 390
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLG 416
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 276
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 277 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 336
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 390
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLG 416
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPWGNGQRACIGQQFALHEATLVLG 415
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPHGNGQRACIGQQFALHEATLVLG 415
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 276
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 277 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYA 336
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 390
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 391 FKPFGNGQRACIGQQFALHEATLVLG 416
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 278
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P +P + +
Sbjct: 279 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYA 338
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 392
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLG 418
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 229 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 278
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P P + +
Sbjct: 279 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYA 338
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 339 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 392
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 393 FKPFGNGQRACIGQQFALHEATLVLG 418
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLICGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P G R+C+G++ A + L +
Sbjct: 390 FKPAGNGQRACIGQQFALHEATLVLG 415
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C G++ A + L +
Sbjct: 390 FKPFGNGQRACEGQQFALHEATLVLG 415
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++A +TT+ +
Sbjct: 227 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIAGHETTSGLLSF 276
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 277 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 336
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 390
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C G++ A + L +
Sbjct: 391 FKPFGNGQRACPGQQFALHEATLVLG 416
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIEGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIQGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIKGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIMGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I F++ +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITFLIHGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L +++L+ +P G+ L +I +I F++A +TT+ +
Sbjct: 226 SGEQSDDLLTQMLNGKDPETGEPLDDG----------NISYQIITFLIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V ++ +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKVAEEATRVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 26/206 (12%)
Query: 227 SVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW 286
S QS L + +L+ +P G+ L E+IR +I ++A +TT+ +
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDD----------ENIRYQIITELIAGHETTSGLLSF 275
Query: 287 IFYLLGRHPSVQDQLYQELQK--------NNDCLNNEIINHVIREGLRMYPIAPFITRFM 338
Y L ++P V + +E + + + V+ E LR++P AP + +
Sbjct: 276 ALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 339 PKDVEIRG-YLIPKGXXXXXXXXXXXHNPAYFPSP-EQFQPSRWKRDANKKYINVVEPYA 396
+D + G Y + KG + + E+F+P R++ + + +A
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS------AIPQHA 389
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
P+ G R+C+G++ A + L +
Sbjct: 390 FKPFGNGQRACIGQQFALHEATLVLG 415
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 134/361 (37%), Gaps = 52/361 (14%)
Query: 71 EAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNK 130
EA+ + DVR V +G + + E + GL MD PE + R++
Sbjct: 62 EAWLVTRYEDVRAVLG-DGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRL--- 117
Query: 131 YLLKNYSAGPQQELTKELFKAFEHDIVESTKANNKPI----IIAHMLGTPFISHYKELSK 186
++K ++A + L + + H++V+ A +P + A L I +
Sbjct: 118 -VVKAFTARRAESL-RPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPS 175
Query: 187 EIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFN 246
HD F +A ++ + E+ Q+ A +L+ +
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTA--------------EEMQEAAEQAYAYMGDLIDRRRKEP 221
Query: 247 GDGLSSKLKEV----ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLY 302
D L S L + +++S + + + I ++A ++T YLL P ++ QL
Sbjct: 222 TDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
Query: 303 QELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
E+I + E R P + + R+ +DV +RG I G
Sbjct: 282 D---------RPELIPSAVEELTRWVPLGVGTAVPRYAVEDVTLRGVTIRAGEPVLASTG 332
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+ A FP DA++ ++ P L + G C+G LA+ ++ +
Sbjct: 333 AANRDQAQFP------------DADRIDVDRT-PNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 421 I 421
+
Sbjct: 380 L 380
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 239 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 298
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 299 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 358
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 359 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 421 IA 422
+A
Sbjct: 409 LA 410
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 239 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 298
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 299 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 358
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 359 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 408
Query: 421 IA 422
+A
Sbjct: 409 LA 410
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 240 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 299
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 300 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 359
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 360 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 409
Query: 421 IA 422
+A
Sbjct: 410 LA 411
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 238 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 297
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 298 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 357
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 358 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 407
Query: 421 IA 422
+A
Sbjct: 408 LA 409
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 252 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 311
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 312 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 371
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 372 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 421 IA 422
+A
Sbjct: 422 LA 423
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ--DQLYQELQK 307
LS+ ++ +S + M++ + A T++I+T W L +V+ + L +E+++
Sbjct: 252 LSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEE 311
Query: 308 NNDCLN-NEIINHV------IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
LN N +++ + RE +R P + R + DV++ Y++PKG
Sbjct: 312 FPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPL 371
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
H+ FP P ++ P R ++ A + + G C+G+K Q+
Sbjct: 372 LSHHDEEAFPEPRRWDPERDEKVEG----------AFIGFGAGVHKCIGQKFGLLQVKTI 421
Query: 421 IA 422
+A
Sbjct: 422 LA 423
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 133/361 (36%), Gaps = 52/361 (14%)
Query: 71 EAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNK 130
EA+ + DVR V +G + + E + GL MD PE + R++
Sbjct: 62 EAWLVTRYEDVRAVLG-DGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRL--- 117
Query: 131 YLLKNYSAGPQQELTKELFKAFEHDIVESTKANNKPI----IIAHMLGTPFISHYKELSK 186
++K ++A + L + + H++V+ A +P + A L I +
Sbjct: 118 -VVKAFTARRAESL-RPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPS 175
Query: 187 EIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFN 246
HD F +A ++ + E+ Q+ A +L+ +
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTA--------------EEMQEAAEQAYAYMGDLIDRRRKEP 221
Query: 247 GDGLSSKLKEV----ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLY 302
D L S L + +++S + + + I ++A ++T YLL P ++ QL
Sbjct: 222 TDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
Query: 303 QELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
E+I + E R P + R+ +DV +RG I G
Sbjct: 282 D---------RPELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLASTG 332
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+ A FP DA++ ++ P L + G C+G LA+ ++ +
Sbjct: 333 AANRDQAQFP------------DADRIDVDRT-PNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 421 I 421
+
Sbjct: 380 L 380
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 133/361 (36%), Gaps = 52/361 (14%)
Query: 71 EAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNK 130
EA+ + DVR V +G + + E + GL MD PE + R++
Sbjct: 62 EAWLVTRYEDVRAVLG-DGRFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHSRLRRL--- 117
Query: 131 YLLKNYSAGPQQELTKELFKAFEHDIVESTKANNKPI----IIAHMLGTPFISHYKELSK 186
++K ++A + L + + H++V+ A +P + A L I +
Sbjct: 118 -VVKAFTARRAESL-RPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPS 175
Query: 187 EIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFN 246
HD F +A ++ + E+ Q+ A +L+ +
Sbjct: 176 ADHDRFTRWSGAFLSTAEVTA--------------EEMQEAAEQAYAYMGDLIDRRRKEP 221
Query: 247 GDGLSSKLKEV----ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLY 302
D L S L + +++S + + + I ++A ++T YLL P ++ QL
Sbjct: 222 TDDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLL 281
Query: 303 QELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
E+I + E R P + R+ +DV +RG I G
Sbjct: 282 D---------RPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLASTG 332
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+ A FP DA++ ++ P L + G C+G LA+ ++ +
Sbjct: 333 AANRDQAQFP------------DADRIDVDRT-PNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 421 I 421
+
Sbjct: 380 L 380
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 57/279 (20%)
Query: 177 FISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALAS 236
++ +EL ++ D + ++ E L+++P ++++ L ++V +++ +
Sbjct: 104 WVRTTRELVGDLLDGVEA-GQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAM-FEA 161
Query: 237 ELLHKMEPFNGDG---------LSSKLKEV---ENVSP-ESIRRMVIDFILAA--GDTTA 281
L+ EP +GD LS+++ E+ + V+P + + ++D A ++ A
Sbjct: 162 MLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEA 221
Query: 282 ISTQWIFYLLG----------------RHPSVQDQLYQELQKNNDCLNNEIINHVIREGL 325
I+T +FY +G R P V +N++ IIN ++R
Sbjct: 222 IATILVFYAVGHMAIGYLIASGIELFARRPEVFTAF-----RNDESARAAIINEMVR--- 273
Query: 326 RMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDAN 385
M P RF +DVEI G LI G +P F P+ F +R
Sbjct: 274 -MDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR------ 326
Query: 386 KKYINVVEPYAS--LPYAMGARSCVGRKLAQTQMCLTIA 422
P AS L + +G SC G+ +++ + A
Sbjct: 327 -------PPAASRNLSFGLGPHSCAGQIISRAEATTVFA 358
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA +T+ YLL H
Sbjct: 203 RRTEP--GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFETSVSLIGIGTYLLLTH 260
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++++ L N + E LR TRF ++VEI G IP+
Sbjct: 261 P---DQLAL-VRRDPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 311
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P +F +R R L + G C+GR LA+
Sbjct: 312 VLVANGAANRDPKQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 358
Query: 415 TQ 416
+
Sbjct: 359 LE 360
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 57/279 (20%)
Query: 177 FISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALAS 236
++ +EL ++ D + ++ E L+++P ++++ L ++V +++ +
Sbjct: 106 WVRTTRELVGDLLDGVEA-GQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAM-FEA 163
Query: 237 ELLHKMEPFNGDG---------LSSKLKEV---ENVSP-ESIRRMVIDFILAA--GDTTA 281
L+ EP +GD LS+++ E+ + V+P + + ++D A ++ A
Sbjct: 164 MLMQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNPGDGLADSLLDAARAGEITESEA 223
Query: 282 ISTQWIFYLLG----------------RHPSVQDQLYQELQKNNDCLNNEIINHVIREGL 325
I+T +FY +G R P V +N++ IIN ++R
Sbjct: 224 IATILVFYAVGHMAIGYLIASGIELFARRPEVFTAF-----RNDESARAAIINEMVR--- 275
Query: 326 RMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDAN 385
M P RF +DVEI G LI G +P F P+ F +R
Sbjct: 276 -MDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR------ 328
Query: 386 KKYINVVEPYAS--LPYAMGARSCVGRKLAQTQMCLTIA 422
P AS L + +G SC G+ +++ + A
Sbjct: 329 -------PPAASRNLSFGLGPHSCAGQIISRAEATTVFA 360
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 191 LSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL------HKMEP 244
+ Q++ E + L I ++ L LS + V Q L + L K+EP
Sbjct: 162 MCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP 221
Query: 245 FNGDGLSSKLKEV--ENVSPESIRRMVIDFILAAG-DTTAISTQWIFYLLGRHPSVQDQL 301
GD L+S + + V + R ++ +L AG +TT Y +HP DQ
Sbjct: 222 --GDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP---DQ- 275
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPFI-TRFMPKDVEIRGYLIPKGXXXXXXXX 360
+ ++++N E+ + E LR P P TR +D E+ G IP G
Sbjct: 276 WMKIKENP-----ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAH 330
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+P F DA++ I V S+ + G C+G LA+ ++
Sbjct: 331 VAHRDPRVF------------ADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEA 378
Query: 421 IA 422
+A
Sbjct: 379 VA 380
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 95/242 (39%), Gaps = 33/242 (13%)
Query: 191 LSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL------HKMEP 244
+ Q++ E + L I ++ L LS + V Q L + L K+EP
Sbjct: 152 MCQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP 211
Query: 245 FNGDGLSSKLKEV--ENVSPESIRRMVIDFILAAG-DTTAISTQWIFYLLGRHPSVQDQL 301
GD L+S + + V + R ++ +L AG +TT Y +HP DQ
Sbjct: 212 --GDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHP---DQ- 265
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPFI-TRFMPKDVEIRGYLIPKGXXXXXXXX 360
+ ++++N E+ + E LR P P TR +D E+ G IP G
Sbjct: 266 WMKIKENP-----ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAH 320
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+P F DA++ I V S+ + G C+G LA+ ++
Sbjct: 321 VAHRDPRVF------------ADADRFDITVKREAPSIAFGGGPHFCLGTALARLELTEA 368
Query: 421 IA 422
+A
Sbjct: 369 VA 370
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 18/182 (9%)
Query: 250 LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQW-IFYLLG-RHPSVQDQLYQEL-- 305
L + ++ +S + M++ + A T+ I+T W + +L+ R+ +L+QE+
Sbjct: 238 LGAVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDE 297
Query: 306 ---QKNNDCLNNEI--INHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXX 360
Q N D + E+ RE +R P + R + K V++ Y++P+G
Sbjct: 298 FPAQLNYDNVMEEMPFAEQCARESIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPL 357
Query: 361 XXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLT 420
+ FP+P ++ P R N K ++ A + G C+G K Q+
Sbjct: 358 LSHQDEEAFPNPREWNPER-----NMKLVD----GAFCGFGAGVHKCIGEKFGLLQVKTV 408
Query: 421 IA 422
+A
Sbjct: 409 LA 410
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA +++ YLL H
Sbjct: 203 RRTEP--GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTH 260
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++++ L N + E LR TRF ++VEI G IP+
Sbjct: 261 P---DQLAL-VRRDPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 311
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P +F +R R L + G C+GR LA+
Sbjct: 312 VLVANGAANRDPKQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 358
Query: 415 TQ 416
+
Sbjct: 359 LE 360
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA +++ YLL H
Sbjct: 202 RRTEP--GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFESSVSLIGIGTYLLLTH 259
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++++ L N + E LR TRF ++VEI G IP+
Sbjct: 260 P---DQLAL-VRRDPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 310
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P +F +R R L + G C+GR LA+
Sbjct: 311 VLVANGAANRDPKQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 357
Query: 415 TQ 416
+
Sbjct: 358 LE 359
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA + + YLL H
Sbjct: 202 RRTEP--GDDLLSALISVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 259
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++ + L N + E LR TRF ++VEI G IP+
Sbjct: 260 P---DQLAL-VRADPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 310
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P+ FP P +F +R R L + G C+GR LA+
Sbjct: 311 VLVANGAANRDPSQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 357
Query: 415 TQ 416
+
Sbjct: 358 LE 359
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA + + YLL H
Sbjct: 203 RRTEP--GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 260
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++++ L N + E LR TRF ++VEI G IP+
Sbjct: 261 P---DQLAL-VRRDPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 311
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P +F +R R L + G C+GR LA+
Sbjct: 312 VLVANGAANRDPKQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 358
Query: 415 TQ 416
+
Sbjct: 359 LE 360
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 73/182 (40%), Gaps = 29/182 (15%)
Query: 240 HKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH 294
+ EP GD L S L V++ +S + + + + +LA + + YLL H
Sbjct: 202 RRTEP--GDDLLSALIRVQDDDDGRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTH 259
Query: 295 PSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXX 354
P DQL ++++ L N + E LR TRF ++VEI G IP+
Sbjct: 260 P---DQLAL-VRRDPSALPN-----AVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYST 310
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P +F +R R L + G C+GR LA+
Sbjct: 311 VLVANGAANRDPKQFPDPHRFDVTRDTR-------------GHLSFGQGIHFCMGRPLAK 357
Query: 415 TQ 416
+
Sbjct: 358 LE 359
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 61/148 (41%), Gaps = 23/148 (15%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMY 328
+ ++A +T A + W F LL P Q ++ + + E +E LR+Y
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAE---------SEEAALAAFQEALRLY 265
Query: 329 PIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW---KRDAN 385
P A +TR + + + + +P+G YFP E FQP R+ + +
Sbjct: 266 PPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFLAERGTPS 323
Query: 386 KKYINVVEPYASLPYAMGARSCVGRKLA 413
+Y P+ +G R C+GR A
Sbjct: 324 GRYF---------PFGLGQRLCLGRDFA 342
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 22/186 (11%)
Query: 236 SELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHP 295
EL+ GD L S L ++++ + + + ++ +TT + + L P
Sbjct: 215 DELITARRKEPGDDLVSTLVTDDDLTIDDVLLNCDNVLIGGNETTRHAITGAVHALATVP 274
Query: 296 SVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXX 355
+ L + ++ V+ E LR A + R DV I G +P G
Sbjct: 275 GLLTALRD---------GSADVDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPV 325
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
+PA F P+ F P R +P + + G C+G LA+
Sbjct: 326 VAWLPAANRDPAEFDDPDTFLPGR-------------KPNRHITFGHGMHHCLGSALARI 372
Query: 416 QMCLTI 421
++ + +
Sbjct: 373 ELSVVL 378
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 25/177 (14%)
Query: 247 GDGLSSK-LKEVENVSPESI---RRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLY 302
GD L S+ L E P ++ RRM + + DT A + L RHP Q L
Sbjct: 202 GDDLFSRILSEPVGGRPWTVDEARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRLLR 261
Query: 303 QELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXX 362
+ ++I E +R YP ++R DV+ G I KG
Sbjct: 262 E---------RPDLIPAAADELMRRYPTVA-VSRNAVADVDADGVTIRKGDLVYLPSVLH 311
Query: 363 XHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+PA F +PE+ ++ + P +GA CVG LA+ ++ +
Sbjct: 312 NLDPASFEAPEEV-----------RFDRGLAPIRHTTMGVGAHRCVGAGLARMEVIV 357
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 23/148 (15%)
Query: 269 VIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMY 328
+ ++A +T A + W F LL P Q ++ + + E +E LR+Y
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAE---------SEEAALAAFQEALRLY 265
Query: 329 PIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW---KRDAN 385
P A +TR + + + + +P G +FP E F+P R+ + +
Sbjct: 266 PPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQR--LHFPDGEAFRPERFLEERGTPS 323
Query: 386 KKYINVVEPYASLPYAMGARSCVGRKLA 413
+Y P+ +G R C+GR A
Sbjct: 324 GRYF---------PFGLGQRLCLGRDFA 342
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 15/106 (14%)
Query: 313 NNEIINHVIREGLR-MYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPS 371
+ ++ ++ E +R P+ F+ R D E+ G I G H+PA FP
Sbjct: 318 DRNLLPGIVEEAIRWTTPVQHFM-RTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPE 376
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P +F P+ R AN+ L + G+ C+G LA+ +M
Sbjct: 377 PRKFDPT---RPANRH----------LAFGAGSHQCLGLHLARLEM 409
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 7/129 (5%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII 317
E+ S R I+ I AIS +F L H + Y+E ++ + E+
Sbjct: 223 EDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPK---YKEWLRSGNSREREMF 279
Query: 318 NHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQP 377
+R R YP PF+ + KD KG H+P + P++F+P
Sbjct: 280 VQEVR---RYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRP 336
Query: 378 SRW-KRDAN 385
R+ +R+ N
Sbjct: 337 ERFAEREEN 345
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 320 VIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSR 379
VI E +R P ++R+ D+ I + +PKG +P +P++F P R
Sbjct: 292 VIEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
Query: 380 WKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTI 421
A +++ + GA C+G LA+ + + +
Sbjct: 352 ----AQIRHLG---------FGKGAHFCLGAPLARLEATVAL 380
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 22/143 (15%)
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFI 334
A DTT+ S+ L R+P +QL L K++ L +++ +R P+ F+
Sbjct: 267 AGHDTTSSSSGGAIIGLSRNP---EQL--ALAKSDPALIPRLVDEAVR---WTAPVKSFM 318
Query: 335 TRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEP 394
R D E+RG I +G + F +P++F +R+ P
Sbjct: 319 -RTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRF-------------P 364
Query: 395 YASLPYAMGARSCVGRKLAQTQM 417
L + GA C+G+ LA+ +M
Sbjct: 365 NRHLGFGWGAHMCLGQHLAKLEM 387
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 97/247 (39%), Gaps = 37/247 (14%)
Query: 190 DLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGD- 248
DL++ V F + ++ + + + + WT+ + S ++ ++M + D
Sbjct: 143 DLTEAVLSPFPIAVICELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDL 202
Query: 249 -GL--SSKLKEVENVSPESIRRMVIDFILA---------AGDTTAISTQWIFYLLGRHPS 296
GL S ++V ++ ++ R I A G+ ++ +F+LL P
Sbjct: 203 IGLRSDSAGEDVTSLLGAAVGRDEITLSEAVGLAVLLQIGGEAVTNNSGQMFHLLLSRPE 262
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYP--IAPFITRFMPKDVEIRGYLIPKGXX 354
+ ++L E EI I E LR P A ++R +DVEI+G I G
Sbjct: 263 LAERLRSE---------PEIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDA 313
Query: 355 XXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+P FP P++ ++R N P+ S + G C G LA+
Sbjct: 314 VYVSYLAANRDPEVFPDPDRID---FERSPN--------PHVS--FGFGPHYCPGGMLAR 360
Query: 415 TQMCLTI 421
+ L +
Sbjct: 361 LESELLV 367
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 278 VQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Query: 381 K 381
+
Sbjct: 338 R 338
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII 317
+NV+ E ++ + IL +T A + L +P + L++ +K ++
Sbjct: 228 DNVTDEELKGLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESPEKAE-----RVV 282
Query: 318 NHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQP 377
N ++R + P+ R KDV I G LI G + A P P+
Sbjct: 283 NELVRY---LSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVL-- 337
Query: 378 SRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
DAN+ ++ V + G CVG LA++ +
Sbjct: 338 -----DANRAAVSDVG------FGHGIHYCVGAALARSML 366
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 270 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Query: 381 K 381
+
Sbjct: 330 R 330
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 270 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Query: 381 K 381
+
Sbjct: 330 R 330
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 270 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 329
Query: 381 K 381
+
Sbjct: 330 R 330
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 278 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Query: 381 K 381
+
Sbjct: 338 R 338
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/61 (26%), Positives = 28/61 (45%)
Query: 321 IREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRW 380
++E R YP P + +D E G P+G H+ A + P++F+P R+
Sbjct: 278 VQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERF 337
Query: 381 K 381
+
Sbjct: 338 R 338
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 236 SELLHKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTA-ISTQWIFY 289
S+LL + D L S L V + +S E + M + ++A +TT + +
Sbjct: 192 SDLLERKRTEPDDALLSSLLAVSDEDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLA 251
Query: 290 LLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRM-YPIAPFITRFMPKDVEIRGYL 348
LL HP Q +L E + +I+ + E LR P++ RF +DV G
Sbjct: 252 LL-THPD-QRKLLAE--------DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVT 301
Query: 349 IPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCV 408
IP G + + P P++ + RDA+ + G C+
Sbjct: 302 IPAGEMVMLGLAAANRDADWMPEPDRLDIT---RDASGGVF----------FGHGIHFCL 348
Query: 409 GRKLAQTQMCLTIAQ 423
G +LA+ + + I +
Sbjct: 349 GAQLARLEGRVAIGR 363
>pdb|2WM4|A Chain A, X-Ray Structure Of Mycobacterium Tuberculosis Cytochrome
P450 Cyp124 In Complex With Phytanic Acid
pdb|2WM5|A Chain A, X-Ray Structure Of The Substrate-Free Mycobacterium
Tuberculosis Cytochrome P450 Cyp124
Length = 435
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 73/190 (38%), Gaps = 26/190 (13%)
Query: 233 ALASELLHKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAGDTTAISTQWIF 288
A A+ L + D L+S L E E +S I I ++A +TT +
Sbjct: 228 AYATALAEDRRVNHHDDLTSSLVEAEVDGERLSSREIASFFILLVVAGNETTRNAITHGV 287
Query: 289 YLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYL 348
L R+P +D+ + + D L + ++R P+ ++ R + +D+E+RG
Sbjct: 288 LALSRYPEQRDRWWSDF----DGLAPTAVEEIVRWA---SPVV-YMRRTLTQDIELRGTK 339
Query: 349 IPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPY-AMGARSC 407
+ G + + F P F +R P L + GA C
Sbjct: 340 MAAGDKVSLWYCSANRDESKFADPWTFDLAR-------------NPNPHLGFGGGGAHFC 386
Query: 408 VGRKLAQTQM 417
+G LA+ ++
Sbjct: 387 LGANLARREI 396
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 236 SELLHKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTA-ISTQWIFY 289
S+LL + D L S L V + +S E + M + ++A +TT + +
Sbjct: 192 SDLLERKRTEPDDALLSSLLAVSDMDGDRLSQEELVAMAMLLLIAGHETTVNLIGNGVLA 251
Query: 290 LLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRM-YPIAPFITRFMPKDVEIRGYL 348
LL HP Q +L E + +I+ + E LR P++ RF +DV G
Sbjct: 252 LL-THPD-QRKLLAE--------DPSLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVT 301
Query: 349 IPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCV 408
IP G + + P P++ + RDA+ + G C+
Sbjct: 302 IPAGEMVMLGLAAANRDADWMPEPDRLDIT---RDASGGVF----------FGHGIHFCL 348
Query: 409 GRKLAQTQMCLTIAQ 423
G +LA+ + + I +
Sbjct: 349 GAQLARLEGRVAIGR 363
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 26/191 (13%)
Query: 236 SELLHKMEPFNGDGLSSKL-----KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYL 290
S L+ +G+ L S L ++ ++ E + M ++A +TT Y
Sbjct: 219 SRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYA 278
Query: 291 LGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIP 350
L HP DQL L+ + L+ + + EG P+ RF + V++ G +IP
Sbjct: 279 LLSHP---DQL-AALRADMTLLDGAVEEMLRYEG----PVESATYRFPVEPVDLDGTVIP 330
Query: 351 KGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGR 410
G P FP P +F R + L + G C+G
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR-------------DTAGHLAFGHGIHFCIGA 377
Query: 411 KLAQTQMCLTI 421
LA+ + + +
Sbjct: 378 PLARLEARIAV 388
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 26/191 (13%)
Query: 236 SELLHKMEPFNGDGLSSKL-----KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYL 290
S L+ +G+ L S L ++ ++ E + M ++A +TT Y
Sbjct: 219 SRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYA 278
Query: 291 LGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIP 350
L HP DQL L+ + L+ + + EG P+ RF + V++ G +IP
Sbjct: 279 LLSHP---DQL-AALRADMTLLDGAVEEMLRYEG----PVESATYRFPVEPVDLDGTVIP 330
Query: 351 KGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGR 410
G P FP P +F R + L + G C+G
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR-------------DTAGHLAFGHGIHFCIGA 377
Query: 411 KLAQTQMCLTI 421
LA+ + + +
Sbjct: 378 PLARLEARIAV 388
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 26/191 (13%)
Query: 236 SELLHKMEPFNGDGLSSKL-----KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYL 290
S L+ +G+ L S L ++ ++ E + M ++A +TT Y
Sbjct: 219 SRLIDSKRGQDGEDLLSALVRTSDEDGSRLTSEELLGMAHILLVAGHETTVNLIANGMYA 278
Query: 291 LGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIP 350
L HP DQL L+ + L+ + + EG P+ RF + V++ G +IP
Sbjct: 279 LLSHP---DQL-AALRADMTLLDGAVEEMLRYEG----PVESATYRFPVEPVDLDGTVIP 330
Query: 351 KGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGR 410
G P FP P +F R + L + G C+G
Sbjct: 331 AGDTVLVVLADAHRTPERFPDPHRFDIRR-------------DTAGHLAFGHGIHFCIGA 377
Query: 411 KLAQTQMCLTI 421
LA+ + + +
Sbjct: 378 PLARLEARIAV 388
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 279 TTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RF 337
TT++ LL R +L EL+K+ D ++ + E LR+ +A I R
Sbjct: 254 TTSMIALSTLLLLDRP-----ELPAELRKDPD-----LMPAAVDELLRVLSVADSIPLRV 303
Query: 338 MPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYAS 397
+D+E+ G +P H+P F PE+ + R N
Sbjct: 304 AAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVD---FHRTDNHH---------- 350
Query: 398 LPYAMGARSCVGRKLAQTQM 417
+ + G CVG+ LA+ ++
Sbjct: 351 VAFGYGVHQCVGQHLARLEL 370
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 14/98 (14%)
Query: 321 IREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSR 379
+ E LR + IA +T R +DVEI G I G +PA F P R
Sbjct: 282 VEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVER 341
Query: 380 WKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
R L + G C+G+ LA+ ++
Sbjct: 342 GARH-------------HLAFGFGPHQCLGQNLARMEL 366
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
Query: 305 LQKNNDCLNN-----EIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXX 359
L+ + D L+ E + E +R P +TR+ +D+ + + IP+G
Sbjct: 270 LRAHRDVLDELRTTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALL 329
Query: 360 XXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQ 416
+PA FP P+ R A ++ + + +G C+G LA+ +
Sbjct: 330 GSANRDPARFPDPDVLDVHR----AAERQVG---------FGLGIHYCLGATLARAE 373
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 21/160 (13%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII 317
++ + E +R + +LA D + + RHP D + Q +
Sbjct: 219 DDATDEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQ-----RAV 273
Query: 318 NHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQP 377
+ +IR Y P I R +D+ + G I KG +PA P ++
Sbjct: 274 DELIRYLTVPYSPTPRIAR---EDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDV 330
Query: 378 SRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+R EP + + G C+G LA+ ++
Sbjct: 331 TR-------------EPIPHVAFGHGVHHCLGAALARLEL 357
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 57/157 (36%), Gaps = 22/157 (14%)
Query: 260 VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINH 319
+S I V+ FI +T A L HP D L + +++
Sbjct: 218 MSRNEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRR---------PDLLAQ 268
Query: 320 VIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSR 379
+ E LR P TR + DVE+RG + + +P + P+ F R
Sbjct: 269 AVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER 328
Query: 380 WKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQ 416
+P S+ + G R C+G LA+TQ
Sbjct: 329 -------------DPVPSMSFGAGMRYCLGSYLARTQ 352
>pdb|2XKR|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Cyp142: A
Novel Cholesterol Oxidase
Length = 398
Score = 32.0 bits (71), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 13/104 (12%)
Query: 316 IINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQF 375
++ I E LR + R + D E G + G + A F PE+F
Sbjct: 262 LLPGAIEEMLRWTAPVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKF 321
Query: 376 QPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
R P + L + G C+G +LA+ ++ L
Sbjct: 322 DVQR-------------NPNSHLAFGFGTHFCLGNQLARLELSL 352
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 13/88 (14%)
Query: 334 ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVE 393
+ R +DVE+ G I G +P FP P++ R +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-------------D 342
Query: 394 PYASLPYAMGARSCVGRKLAQTQMCLTI 421
P L Y G C G LA+ Q L +
Sbjct: 343 PNPHLAYGNGHHFCTGAVLARMQTELLV 370
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 42/243 (17%)
Query: 203 AALSMLPINLSIKLKLSAWTKFVESV-HQSLA---LASELLHKMEPFNGDGLSSKLKEVE 258
A ++ LPI++ + +A K ES+ H++L SEL+ + F D LS+ ++E
Sbjct: 201 ALVAGLPIHM-FRTAHNAREKLAESLRHENLQKRESISELI-SLRMFLNDTLST-FDDLE 257
Query: 259 NVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQE-------------L 305
+ + A+ T +T W + + R+P +E L
Sbjct: 258 KAKTHLV------VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL 311
Query: 306 QKNNDCLNNE------IINHVIREGLRMYPIAPFITRFMPKD----VEIRGYLIPKGXXX 355
+ N CL+ +++ +I+E LR+ A R +D +E Y I K
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKK----YINVVE-PYASLPYAMGARSCVGR 410
+P +P P F+ R+ + K Y N ++ Y +P+ GA C GR
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Query: 411 KLA 413
A
Sbjct: 431 LFA 433
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 31/88 (35%), Gaps = 13/88 (14%)
Query: 334 ITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVE 393
+ R +DVE+ G I G +P FP P++ R +
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDR-------------D 342
Query: 394 PYASLPYAMGARSCVGRKLAQTQMCLTI 421
P L Y G C G LA+ Q L +
Sbjct: 343 PNPHLAYGNGHHFCTGAVLARMQTELLV 370
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 42/243 (17%)
Query: 203 AALSMLPINLSIKLKLSAWTKFVESV-HQSLA---LASELLHKMEPFNGDGLSSKLKEVE 258
A ++ LPI++ + +A K ES+ H++L SEL+ + F D LS+ ++E
Sbjct: 201 ALVAGLPIHM-FRTAHNAREKLAESLRHENLQKRESISELI-SLRMFLNDTLST-FDDLE 257
Query: 259 NVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQE-------------L 305
+ + A+ T +T W + + R+P +E L
Sbjct: 258 KAKTHLV------VLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSL 311
Query: 306 QKNNDCLNNE------IINHVIREGLRMYPIAPFITRFMPKD----VEIRGYLIPKGXXX 355
+ N CL+ +++ +I+E LR+ A R +D +E Y I K
Sbjct: 312 EGNPICLSQAELNDLPVLDSIIKESLRLSS-ASLNIRTAKEDFTLHLEDGSYNIRKDDII 370
Query: 356 XXXXXXXXHNPAYFPSPEQFQPSRWKRDANKK----YINVVE-PYASLPYAMGARSCVGR 410
+P +P P F+ R+ + K Y N ++ Y +P+ GA C GR
Sbjct: 371 ALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGR 430
Query: 411 KLA 413
A
Sbjct: 431 LFA 433
>pdb|2HQM|A Chain A, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
pdb|2HQM|B Chain B, Crystal Structure Of Glutathione Reductase Glr1 From The
Yeast Saccharomyces Cerevisiae
Length = 479
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 273 ILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAP 332
++ I +F+ LG + + L+K ++C+ N I +H ++EG+ ++ ++
Sbjct: 189 VVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSK 248
Query: 333 FITRFMPKDVE 343
+ + K+VE
Sbjct: 249 IVK--VEKNVE 257
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 65/179 (36%), Gaps = 27/179 (15%)
Query: 241 KMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQ 300
+ EP G + S+L + E ++ + + + + + A D+ A LL HP
Sbjct: 210 RAEP--GPDIISRLNDGE-LTEDRVAHLAMGLLFAGLDSVASIMDNGVVLLAAHPD---- 262
Query: 301 LYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT--RFMPKDVEIRGYLIPKGXXXXXX 358
Q+ + +++ + E LR + R+ +D+E G I G
Sbjct: 263 -----QRAAALADPDVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFD 317
Query: 359 XXXXXHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ F PE+F +R P L + G C+G LA+ ++
Sbjct: 318 LGLPNFDERAFTGPEEFDAAR-------------TPNPHLTFGHGIWHCIGAPLARLEL 363
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 24/170 (14%)
Query: 254 LKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLN 313
+ ++PE +V + A DTT Y L R P D+ + L+ +
Sbjct: 230 FSDTGEITPEEAPLLVRSLLSAGLDTTVNGIAAAVYCLARFP---DE-FARLRADPSLAR 285
Query: 314 NEIINHVIREGLRM-YPIAPFITRFMPKDVEIRGYLIPKGXXXXXXXXXXXHNPAYFPSP 372
N E +R P+ F R +DVE+ G I +G +P + P
Sbjct: 286 N-----AFEEAVRFESPVQTFF-RTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDP 339
Query: 373 EQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
+++ D +K V + G CVG+ +A+ + + +A
Sbjct: 340 DRY-------DITRKTSGHVG------FGSGVHMCVGQLVARLEGEVVLA 376
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,645,761
Number of Sequences: 62578
Number of extensions: 528817
Number of successful extensions: 1513
Number of sequences better than 100.0: 145
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 157
length of query: 423
length of database: 14,973,337
effective HSP length: 101
effective length of query: 322
effective length of database: 8,652,959
effective search space: 2786252798
effective search space used: 2786252798
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)