RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy2144
(423 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 209 bits (533), Expect = 1e-62
Identities = 109/448 (24%), Positives = 192/448 (42%), Gaps = 72/448 (16%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P+FG L+ + G LH K ++ GPI++ +GP L+ V++V
Sbjct: 2 PGPPPLPLFGNLLQL---GRKGNLHSVFTKLQKKYGPIFRLYLGPKPVVVLSGPEAVKEV 58
Query: 85 FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMN--------------- 129
+G + W + +G+ F +GP W + R+ +
Sbjct: 59 LIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWRQLRRFLTPTFTSFGKLSFEPRV 118
Query: 130 --------KYLLKNYSAGPQQELTKELFKAFEHDIVESTKANNKPIIIAH---MLGTPFI 178
+ L K ++T LF+A +++ S I+ L P
Sbjct: 119 EEEARDLVEKLRKTAGEPGVIDITDLLFRAA-LNVICS-------ILFGERFGSLEDPKF 170
Query: 179 SHYKELSKEIHD-LSQVVHKIFEHSAALSMLPINLSIKLKLSAW-------TKFVESVHQ 230
+ +E+ LS ++ + L P KLK A K +E +
Sbjct: 171 LELVKAVQELSSLLSSPSPQLLDLFPILKYFPGPHGRKLK-RARKKIKDLLDKLIEERRE 229
Query: 231 SLALASELLHKMEPFNGDGLSSKLKEVEN-----VSPESIRRMVIDFILAAGDTTAISTQ 285
+L A + D L + L E ++ E +R V++ A DTT+ +
Sbjct: 230 TLDSAKK--SPR-----DFLDALLLAKEEEDGSKLTDEELRATVLELFFAGTDTTSSTLS 282
Query: 286 WIFYLLGRHPSVQDQLYQELQK---NNDCLNNEIINH------VIREGLRMYPIAPF-IT 335
W Y L +HP VQ++L +E+ + + + + + VI+E LR++P+ P +
Sbjct: 283 WALYELAKHPEVQEKLREEIDEVIGDKRSPTYDDLQNMPYLDAVIKETLRLHPVVPLLLP 342
Query: 336 RFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPY 395
R + KD I GYLIPKG+LV++++++ +P FP+PE+F P R+ + + +
Sbjct: 343 REVTKDTVIPGYLIPKGTLVIVNLYALHRDPEVFPNPEEFDPERF----LDENGKFRKSF 398
Query: 396 ASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
A LP+ G R+C+G +LA+ +M L +A
Sbjct: 399 AFLPFGAGPRNCLGERLARMEMKLFLAT 426
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 155 bits (394), Expect = 4e-43
Identities = 83/366 (22%), Positives = 144/366 (39%), Gaps = 56/366 (15%)
Query: 72 AYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKY 131
+ ++ ADVR+V + + + + D L +DGPE + RK++
Sbjct: 50 FWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPA 109
Query: 132 L----LKNYSAGPQQELTKELFKAFEHDIVESTKANNKPI---IIAHMLGTPFISHYKEL 184
L+ Y +E+ L + + +IA +LG P + L
Sbjct: 110 FTPRALRGY-RPLIREIADRLLDDLWQGGADLVLDFAAELTLRVIAELLGVPLEDRPQLL 168
Query: 185 SKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEP 244
+ + L + P + + L + L +
Sbjct: 169 -------------RWSDALLLRLDPDLGP-------EEPWRRARAARRELDAYLRALIAE 208
Query: 245 FN----GDGLSSKLKEVEN----VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPS 296
D LS L ++ +S + IR +I ++A +TTA + W Y L RHP
Sbjct: 209 RRAAPRDDLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPD 268
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVL 356
+L E + ++ V+ E LR+YP P R +DVE+ GY IP G++VL
Sbjct: 269 QLAKLRAEP-------DRPLLEAVVEETLRLYPPVPLARRVATEDVELGGYRIPAGTVVL 321
Query: 357 LSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQ 416
LS+ +++ +P FP P++F P R+ A LP+ G C+G LA+ +
Sbjct: 322 LSIGAANRDPEVFPDPDEFDPERF-------------NNAHLPFGGGPHRCLGAALARLE 368
Query: 417 MCLTIA 422
+ + +A
Sbjct: 369 LKVALA 374
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 117 bits (296), Expect = 5e-29
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 19/170 (11%)
Query: 264 SIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNN 314
SI ++DF LA DT+A S +W+ +L +P +Q++ Y E++ +D +
Sbjct: 283 SILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKSTVNGRNKVLLSDRQST 342
Query: 315 EIINHVIREGLRMYPIAPF-ITRFMPKDVEI-RGYLIPKGSLVLLSVFSSSHNPAYFPSP 372
+I+E LR P++PF + R D+ I G+ IPK + +L++ +S N YF +P
Sbjct: 343 PYTVAIIKETLRYKPVSPFGLPRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENP 402
Query: 373 EQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
EQF PSR ++N A +P+++G R+CVG++ AQ ++ L +
Sbjct: 403 EQFDPSR--------FLNPDSNDAFMPFSIGPRNCVGQQFAQDELYLAFS 444
Score = 28.1 bits (63), Expect = 9.6
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 18/114 (15%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P PI G L + G HR + K ++ G I++ + L+D +R++
Sbjct: 34 PIP--IPILGNLHQL-----GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREM 86
Query: 85 FALEGTY----PKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLK 134
F PK +P K+ Y G+ G W + R+I+ K + K
Sbjct: 87 FVDNFDNFSDRPK--IPSI--KHGTFY---HGIVTSSGEYWKRNREIVGKAMRK 133
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 109 bits (275), Expect = 4e-26
Identities = 100/452 (22%), Positives = 185/452 (40%), Gaps = 73/452 (16%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK- 83
P P WPI G L+ + G HR + ++ GP+ ++G V+A +D +R+
Sbjct: 35 PGPPRWPIVGNLLQL-----GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREI 89
Query: 84 ------VFALEGTYPKHILPQCWEKYRKLYGC-DRGLYFMDGPEWMKYRKIMNKYLLK-- 134
VFA P+ YGC D L + GP W + R+I ++LL
Sbjct: 90 LLRQDDVFASR--------PRTLAAVHLAYGCGDVALAPL-GPHWKRMRRICMEHLLTTK 140
Query: 135 ------NYSAGPQQELTKELFKAFEH----DIVESTKANNKPIIIAHMLGTPFISHYKEL 184
+ A + L +++++A + ++ E A + + +LG +
Sbjct: 141 RLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAFSMNNVTRMLLGKQYFGAESAG 200
Query: 185 SKEIHDLSQVVHKIFEHSAALSM---LPINLSIKL-----KLSAWTKFVESVHQSL---- 232
KE + + H++F + + LP + K+ K V+ H +
Sbjct: 201 PKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKIIDEH 260
Query: 233 -ALASELLHKMEPFN---------GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAI 282
S L + + G+ + +VE I+ ++ D I AA DT+A+
Sbjct: 261 RRARSGKLPGGKDMDFVDVLLSLPGENGKEHMDDVE------IKALMQDMIAAATDTSAV 314
Query: 283 STQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLNNEIINHVIREGLRMYPIAPF 333
+ +W + ++P V ++ +EL + +D ++ + V+RE RM+P PF
Sbjct: 315 TNEWAMAEVIKNPRVLRKIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPF 374
Query: 334 -ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR-WKRDANKKYINV 391
I + I GY IP + V ++ N + E+F+P R W + ++ I+
Sbjct: 375 LIPHESLRATTINGYYIPAKTRVFINTHGLGRNTKIWDDVEEFRPERHWPAEGSRVEISH 434
Query: 392 VEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
+ LP++ G R C G L T + + +A+
Sbjct: 435 GPDFKILPFSAGKRKCPGAPLGVTMVLMALAR 466
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 101 bits (253), Expect = 2e-23
Identities = 50/178 (28%), Positives = 92/178 (51%), Gaps = 13/178 (7%)
Query: 254 LKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK------ 307
L E +++ E + +V + I+ A DTT ++T+W Y L ++P Q++LY+E+++
Sbjct: 252 LSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVCGDER 311
Query: 308 --NNDCLNNEIINHVIREGLRMYPIAPFI-TRFMPKDVEIRGYLIPKGSLVLLSVFSSSH 364
D N +N V E LR Y P + RF+ +D + GY IP G+ + ++++ +
Sbjct: 312 VTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIPAGTQIAINIYGCNM 371
Query: 365 NPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
+ + +PE++ P R+ +KY + Y ++ + G R C G A C+ IA
Sbjct: 372 DKKRWENPEEWDPERF---LGEKY-ESADMYKTMAFGAGKRVCAGSLQAMLIACMAIA 425
Score = 28.9 bits (65), Expect = 5.9
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 30 WPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDT 78
P+ G L+ LKE K+ HR K + GPIY + G LN T
Sbjct: 7 LPVIGNLLQ-LKE---KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNST 51
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 91.5 bits (227), Expect = 4e-20
Identities = 68/226 (30%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 208 LPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRR 267
+PINL L + K + + Q LA + + D L S + + E ++ E I
Sbjct: 209 MPINLPGTLFHKS-MKARKELAQILAKILSKRRQNGSSHNDLLGSFMGDKEGLTDEQIAD 267
Query: 268 MVIDFILAAGDTTAISTQWIFYLLGRHPSV------------QDQLYQELQKNNDCLNNE 315
+I I AA DTTA WI L +PSV +D+ E D
Sbjct: 268 NIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAIRKDKEEGESLTWEDTKKMP 327
Query: 316 IINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQF 375
+ + VI+E LR+ I F R +DVE GYLIPKG VL + H+ F P +F
Sbjct: 328 LTSRVIQETLRVASILSFTFREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGKF 387
Query: 376 QPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTI 421
PSR++ +P +P+ G SC G +LA+ ++ + I
Sbjct: 388 DPSRFEV--------APKPNTFMPFGNGTHSCPGNELAKLEISVLI 425
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 87.6 bits (217), Expect = 1e-18
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 234 LASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR 293
L S LL DG ++ + E I+ ++++ A DTT+ + +W L R
Sbjct: 273 LLSTLLALKREQQADGEGGRITDTE------IKALLLNLFTAGTDTTSSTVEWAIAELIR 326
Query: 294 HPSVQDQLYQELQK--NNDCLNNEI-------INHVIREGLRMYPIAPF-ITRFMPKDVE 343
HP + + +EL D L +E + VI+E R++P P + R ++ E
Sbjct: 327 HPDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSLPRMAAEECE 386
Query: 344 IRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVV-EPYASLPYAM 402
I GY IPKG+ +L++V++ + +P +P P +F+P R+ ++V + +P+
Sbjct: 387 INGYHIPKGATLLVNVWAIARDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGA 446
Query: 403 GARSCVGRKLAQTQMCLTIA 422
G R C G + L A
Sbjct: 447 GRRICAGLSWGLRMVTLLTA 466
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 85.1 bits (211), Expect = 7e-18
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 269 VIDFIL----AAGDTTAISTQWIFYLLGRHPSV-------QDQLYQELQKNNDCLN---- 313
+ID +L A +++ T W L HP V Q+++ ++ L
Sbjct: 288 IIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQKGLTLKDV 347
Query: 314 --NEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPS 371
E ++ VI E LR+ I+ + R DVE+ GY IPKG VL +P +P+
Sbjct: 348 RKMEYLSQVIDETLRLINISLTVFREAKTDVEVNGYTIPKGWKVLAWFRQVHMDPEVYPN 407
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
P++F PSRW + LP+ +G+R C G LA+ ++ +
Sbjct: 408 PKEFDPSRWDN-------YTPKAGTFLPFGLGSRLCPGNDLAKLEISI 448
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 78.4 bits (193), Expect = 2e-15
Identities = 50/174 (28%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN--------N 309
++VS + +R ++ ++A +T+A W FYLL + PSV +L +E+
Sbjct: 385 DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIE 444
Query: 310 DCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYF 369
D + VI E LR+YP P + R ++ + GY I +G + +SV++ +P ++
Sbjct: 445 DMKKLKYTTRVINESLRLYPQPPVLIRRSLENDMLGGYPIKRGEDIFISVWNLHRSPKHW 504
Query: 370 PSPEQFQPSRWKRDA-NKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
E+F P RW D N N + ++ LP+ G R CVG A + + A
Sbjct: 505 DDAEKFNPERWPLDGPNPNETN--QNFSYLPFGGGPRKCVGDMFASFENVVATA 556
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 76.4 bits (188), Expect = 6e-15
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 34/196 (17%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ----------- 306
N + +S+R +V++F++A DTTA + W Y++ +P V ++LY EL+
Sbjct: 286 SNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEED 345
Query: 307 -KNNDCLNNEI-----------------INHVIREGLRMYPIAPFITR-FMPKDVEIRGY 347
+++ N + ++ VI E LR+YP P + + DV G
Sbjct: 346 PEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQDPKGILEDDVLPDGT 405
Query: 348 LIPKGSLVLLSVFSSSHNPAYF-PSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARS 406
+ G +V +S + P F+P RW +D P+ + G R
Sbjct: 406 KVKAGGMVTYVPYSMGRMEYNWGPDAASFKPERWIKDG---VFQNASPFKFTAFQAGPRI 462
Query: 407 CVGRKLAQTQMCLTIA 422
C+G+ A QM + +A
Sbjct: 463 CLGKDSAYLQMKMALA 478
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 72.5 bits (178), Expect = 8e-14
Identities = 83/357 (23%), Positives = 138/357 (38%), Gaps = 84/357 (23%)
Query: 111 RGLYFMDGPEWMKYRKIMNKYL----LKNYSAGPQQELTKELFKAFEHDIVESTKANNKP 166
RGL +G +W R I LK Y AG E TK++ ++ + + +
Sbjct: 142 RGLLMANGADWYHQRHIAAPAFMGDRLKGY-AGHMVECTKQMLQSLQKAVES---GQTEV 197
Query: 167 IIIAHMLG--------TPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLP--------I 210
I +M T F S Y E K+I L V+ ++ + P
Sbjct: 198 EIGEYMTRLTADIISRTEFDSSY-EKGKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKY 256
Query: 211 NLSIK-LKLSAWTKFVESVHQSLALASE-------------LLHKMEPFNGDGLSSKLKE 256
N IK LK +E + LL++ME +G + L+
Sbjct: 257 NREIKSLKGEVERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQ- 315
Query: 257 VENVSPESIRRMVID----FILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCL 312
+++D F A +TTA+ W LL +P+ QD++ E+ +
Sbjct: 316 -----------LIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEV---AEVC 361
Query: 313 NNE-----------IINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFS 361
E ++N VI E LR+YP A + R +D+++ IPKG + + V +
Sbjct: 362 GGETPSVDHLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKLGDLHIPKGLSIWIPVLA 421
Query: 362 SSHNPAYF-PSPEQFQPSRWKRDANKKYINVVEPYAS----LPYAMGARSCVGRKLA 413
H+ + +F P R+ A + P+A +P+A G R+C+G+ A
Sbjct: 422 IHHSEELWGKDANEFNPDRF---AGR-------PFAPGRHFIPFAAGPRNCIGQAFA 468
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 72.7 bits (178), Expect = 9e-14
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 271 DFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEI----------INHV 320
+F+ A DTT+ + QWI L ++PS+Q +L+ E++ E+ + V
Sbjct: 313 EFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAV 372
Query: 321 IREGLRMYPIAPFITRFMP-KDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+ EGLR +P A F+ +D+E+ GYLIPKG+ V V + + P +F P R
Sbjct: 373 VLEGLRKHPPAHFVLPHKAAEDMEVGGYLIPKGATVNFMVAEMGRDEREWERPMEFVPER 432
Query: 380 WKRDANKKYINVVEPYA--SLPYAMGARSCVGRKLA 413
+ + + ++V +P+ +G R C G +A
Sbjct: 433 FLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIA 468
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 68.1 bits (166), Expect = 2e-12
Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 241 KMEPFNGDGLS-------SKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR 293
+ EP++ D L+ SK K ++ + IR ++ +LA DTT+ + W F+LL +
Sbjct: 271 ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSK 330
Query: 294 HPSVQDQLYQELQKNNDCLNNE---IINHVIREGLRMYPIAPFITRFMPK-DVEIRGYLI 349
HP V ++ E+ D + E ++ + E +R+YP PF + K DV G+ +
Sbjct: 331 HPQVMAKIRHEINTKFDNEDLEKLVYLHAALSESMRLYPPLPFNHKAPAKPDVLPSGHKV 390
Query: 350 PKGSLVLLSVFS-SSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCV 408
S +++ +++ + F+P RW D + Y + + G R+C+
Sbjct: 391 DAESKIVICIYALGRMRSVWGEDALDFKPERWISDNGG--LRHEPSYKFMAFNSGPRTCL 448
Query: 409 GRKLAQTQM 417
G+ LA QM
Sbjct: 449 GKHLALLQM 457
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 68.0 bits (166), Expect = 2e-12
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 19/181 (10%)
Query: 259 NVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQE------LQKN---- 308
N+S E I +++ + A +T++++ + L P +L +E +K
Sbjct: 274 NLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELREEHLEIARAKKQSGES 333
Query: 309 ----NDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSH 364
D E VI E LR+ + F+ R KDV +GY IP G VL V ++ H
Sbjct: 334 ELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYDIPSGWKVL-PVIAAVH 392
Query: 365 -NPAYFPSPEQFQPSRWKRDANKKYINVVEPYAS---LPYAMGARSCVGRKLAQTQMCLT 420
+ + + P+ F P RW+++ N+ + + +P+ G R C G +LA+ +M +
Sbjct: 393 LDSSLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVF 452
Query: 421 I 421
I
Sbjct: 453 I 453
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 67.5 bits (165), Expect = 4e-12
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 274 LAAGDTTAISTQWIFYLLGRHPSVQDQLYQE----LQKNNDCLNNEI-----INHVIREG 324
+AA +TT S +W L HP +Q +L E L N + + V++E
Sbjct: 303 VAAIETTLWSIEWGIAELVNHPEIQKKLRDELDTVLGPGNQVTEPDTHKLPYLQAVVKET 362
Query: 325 LRMYPIAPFITRFMP-KDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRD 383
LR++ P + M +D ++ GY IP S +L++ + ++NP + +PE+F+P R+ +
Sbjct: 363 LRLHMAIPLLVPHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKNPEEFRPERFLEE 422
Query: 384 ANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
K + LP+ +G RSC G LA + + + +
Sbjct: 423 -EAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGR 461
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 67.1 bits (164), Expect = 5e-12
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 16/168 (9%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPS----VQDQLYQELQKNN---- 309
E VS +R ++ ++A +TT W YLL ++P Q++L + LQ
Sbjct: 272 EEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQGRPPTYE 331
Query: 310 DCLNNEIINHVIREGLRMYPIAP-FITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAY 368
D + + I E +R+YP P I R +DV GY + G +++SV++ +P
Sbjct: 332 DIKELKYLTRCINESMRLYPHPPVLIRRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPEV 391
Query: 369 FPSPEQFQPSRWKRDA---NKKYINVVEPYASLPYAMGARSCVGRKLA 413
+ E+F P R+ D N+ + + +P++ G R CVG + A
Sbjct: 392 WERAEEFVPERFDLDGPVPNETNTD----FRYIPFSGGPRKCVGDQFA 435
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 65.5 bits (160), Expect = 1e-11
Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 309 NDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSH-NPA 367
D ++ +VI E LRM I + R KDVEI+GYLIPKG VL F S H +
Sbjct: 309 TDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEIKGYLIPKGWCVLAY-FRSVHLDEE 367
Query: 368 YFPSPEQFQPSRWK-RDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
+ +P QF P RW+ +D N P+ G R C G LA+
Sbjct: 368 NYDNPYQFNPWRWQEKDMNNSSFT--------PFGGGQRLCPGLDLAR 407
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 65.0 bits (158), Expect = 3e-11
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 12/176 (6%)
Query: 260 VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNND 310
V+P+ I+ ++F +AA D A + +W + ++P + + +EL + +D
Sbjct: 310 VTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKALKELDEVVGKDRLVQESD 369
Query: 311 CLNNEIINHVIREGLRMYPIAPFITRFMPK-DVEIRGYLIPKGSLVLLSVFSSSHNPAYF 369
N + RE R++P A ++ + + D + GY IPKGS + + NP +
Sbjct: 370 IPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKIW 429
Query: 370 PSPEQFQPSR-WKRDANKKYINVVEPYAS-LPYAMGARSCVGRKLAQTQMCLTIAQ 423
P ++P R + D K + +VE + ++ G R CVG K+ M + +A+
Sbjct: 430 KDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLAR 485
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase.
Length = 516
Score = 63.3 bits (154), Expect = 8e-11
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 263 ESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLN 313
++I+ +++D + +T A + +W L + P ++ QEL + +D
Sbjct: 303 DNIKAIIMDVMFGGTETVASAIEWAMAELMKSPEDLKRVQQELADVVGLNRRVEESDLEK 362
Query: 314 NEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPE 373
+ ++E LR++P P + +D E+ GY IPK S V+++ ++ + + P+
Sbjct: 363 LTYLKCTLKETLRLHPPIPLLLHETAEDAEVAGYFIPKRSRVMINAWAIGRDKNSWEDPD 422
Query: 374 QFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
F+PSR+ + + + +P+ G RSC G +L + L +A
Sbjct: 423 TFKPSRFLKPGVPDFKG--SHFEFIPFGSGRRSCPGMQLGLYALDLAVA 469
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1.
Length = 502
Score = 61.3 bits (148), Expect = 3e-10
Identities = 41/169 (24%), Positives = 86/169 (50%), Gaps = 18/169 (10%)
Query: 263 ESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK-----------NNDC 311
++++ +++D ++A DT A + W L ++P V + E+++ +D
Sbjct: 288 DNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDV 347
Query: 312 LNNEIINHVIREGLRMYPIAP-FITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPA-YF 369
N +++E LR+ P+ P I R +D +I GY IP G+ V ++ ++ S + +
Sbjct: 348 KNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWG 407
Query: 370 PSPEQFQPSRW-KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P+P++F+P R+ +++ + K + Y +P+ G R C G +L +
Sbjct: 408 PNPDEFRPERFLEKEVDFKGTD----YEFIPFGSGRRMCPGMRLGAAML 452
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 58.7 bits (142), Expect = 2e-09
Identities = 34/166 (20%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSV----QDQLYQELQKNNDCLN 313
E ++ +I+ ++++ A DT++ +W + ++PS+ +++ Q + +N +
Sbjct: 283 EKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRNRRLVE 342
Query: 314 NEI-----INHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPA 367
+++ + + +E R +P P + R + E+ GY IPK + + +++++ +P
Sbjct: 343 SDLPKLPYLQAICKESFRKHPSTPLNLPRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPD 402
Query: 368 YFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLA 413
+ +PE+F+P R+ + N K + +P+ G R C G ++
Sbjct: 403 VWENPEEFRPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMG 448
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 57.8 bits (140), Expect = 4e-09
Identities = 42/168 (25%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 265 IRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK----NNDCLNNEII--- 317
+R +V+ F+LA DT A + F+LL +HP V + +E + N + + E +
Sbjct: 294 LRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEM 353
Query: 318 ---NHVIREGLRMYPIAPFITRF-MPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYF-PSP 372
+ + E +R++P F ++F DV G + KG+ V ++ + P
Sbjct: 354 HYLHAALYESMRLFPPVQFDSKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDC 413
Query: 373 EQFQPSRWKRDANKKYINVVEPYASLPYAM---GARSCVGRKLAQTQM 417
+F+P RW ++ V P Y + G R C+G+++A +M
Sbjct: 414 LEFKPERWLKNG------VFVPENPFKYPVFQAGLRVCLGKEMALMEM 455
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase.
Length = 543
Score = 57.7 bits (139), Expect = 5e-09
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 260 VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK---------NND 310
++ + I+ + + ++AA D + + +W + P + + +E+ + +D
Sbjct: 323 LTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAMEEIDRVVGKERFVQESD 382
Query: 311 CLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYF 369
+ +IRE R++P+A F + D + GY IPKGS VLLS + NP +
Sbjct: 383 IPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVW 442
Query: 370 PSPEQFQPSRWKRDANKKYINVVE-PYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
P F+P R + ++ + + E + ++ G R C L + +A+
Sbjct: 443 SDPLSFKPERHLNECSE--VTLTENDLRFISFSTGKRGCAAPALGTAITTMMLAR 495
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 56.1 bits (135), Expect = 2e-08
Identities = 48/183 (26%), Positives = 75/183 (40%), Gaps = 18/183 (9%)
Query: 248 DGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQK 307
D L++ L + S E I ++ ++A +TT+ L P QL +E +K
Sbjct: 251 DMLAALLASDDGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEK 310
Query: 308 N------------NDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLV 355
+D + V+ E LR+ I I R D+E++GY IPKG V
Sbjct: 311 IRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIPKGWKV 370
Query: 356 LLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKY-INVVEPYASLPYAMGARSCVGRKLAQ 414
S + + YF F P RW+ ++ NV P+ G R C G +LA+
Sbjct: 371 FASFRAVHLDHEYFKDARTFNPWRWQSNSGTTVPSNVFTPFGG-----GPRLCPGYELAR 425
Query: 415 TQM 417
+
Sbjct: 426 VAL 428
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 54.7 bits (131), Expect = 4e-08
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 263 ESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---------KNNDCLN 313
E+++ M++D ++ DT A W L ++P + E++ D N
Sbjct: 287 ENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDKGYVSEEDIPN 346
Query: 314 NEIINHVIREGLRMYPIAP-FITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHN-PAYFPS 371
+ VI+E LR+ P+ P + R D +I GY IP +++ ++ ++ S + A+ +
Sbjct: 347 LPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDN 406
Query: 372 PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSC 407
P +F P R+ ++ +K + + LP+ G R C
Sbjct: 407 PNEFIPERFMKE-HKGVDFKGQDFELLPFGSGRRMC 441
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 50.9 bits (122), Expect = 6e-07
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 258 ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQE-----LQKN---- 308
++ E I +I + + +T + ++ L HP +L +E +K
Sbjct: 258 YKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPEDP 317
Query: 309 ---NDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHN 365
ND + VI E R+ I + R +D+E+ GY+IPKG + + +++
Sbjct: 318 IDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMELNGYVIPKGWRIYVYTREINYD 377
Query: 366 PAYFPSPEQFQPSRW--KRDANKKYINVVEPYASLPYAMGARSCVGRKL 412
P +P P F P RW K + Y + + G R C G++L
Sbjct: 378 PFLYPDPMTFNPWRWLDKSLESHNYFFL--------FGGGTRLCPGKEL 418
>gnl|CDD|185155 PRK15243, PRK15243, transcriptional regulator SpvR; Provisional.
Length = 297
Score = 34.6 bits (79), Expect = 0.082
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 222 TKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEV--ENVSPESIRRMVIDFILAAGDT 279
T+F +++++ + LH +E G +K E+ + + PES++ ++I + +G
Sbjct: 61 TEFAQTIYRKVKSHYIFLHALEQEIGPTGKTKQLEIIFDEIYPESLKNLIISALTISGQK 120
Query: 280 TAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGL 325
T I +GR +V Q+ +EL + N+C+ N+ RE L
Sbjct: 121 TNI--------MGR--AVNSQIIEELCQTNNCIVISARNYFHRESL 156
>gnl|CDD|176564 cd08627, PI-PLCc_gamma1, Catalytic domain of metazoan
phosphoinositide-specific phospholipase C-gamma1. This
subfamily corresponds to the catalytic domain present in
metazoan phosphoinositide-specific phospholipase C
(PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a
signaling enzyme that hydrolyzes the membrane
phospholipids phosphatidylinositol-4,5-bisphosphate
(PIP2) to generate two important second messengers in
eukaryotic signal transduction cascades, Inositol
1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG).
InsP3 triggers inflow of calcium from intracellular
stores, while DAG, together with calcium, activates
protein kinase C, which goes on to phosphorylate other
molecules, leading to altered cellular activity. Calcium
is required for the catalysis. PI-PLC-gamma represents a
class of mammalian PI-PLC that has an N-terminal
pleckstrin homology (PH) domain, an array of EF hands, a
PLC catalytic core domain, and a C2 domain. The PLC
catalytic core domain is a TIM barrel with two highly
conserved regions (X and Y) split by a highly degenerate
linker sequence. Unique to PI-PLC-gamma1, a second PH
domain, two SH2 (Src homology 2) regions, and one SH3
(Src homology 3) region is present within this linker
region. PI-PLC-gamma1 is ubiquitously expressed. It is
activated by receptor and non-receptor tyrosine kinases
due to the presence of two SH2 and a single SH3 domain
within the linker region.
Length = 229
Score = 33.8 bits (77), Expect = 0.12
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 174 GTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLA 233
G P I H L+ +I S V+H I EH+ S PI LSI+ S + + H
Sbjct: 56 GMPVIYHGHTLTTKI-KFSDVLHTIKEHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKV 114
Query: 234 LASELLHKMEPFNGDGLSS 252
LL K N DGL S
Sbjct: 115 FGDMLLTKPVDINADGLPS 133
>gnl|CDD|227313 COG4980, GvpP, Gas vesicle protein [General function prediction
only].
Length = 115
Score = 30.4 bits (69), Expect = 0.52
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 244 PFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQ 303
P +G L KLK+ + E D ++ A + S + + G + +
Sbjct: 27 PKSGKELRKKLKKSGDALFELAEDKGTDILMIADKLSKESAETLKDQGGEIKESVKKWKE 86
Query: 304 ELQKNNDCLNNEI 316
++Q + L +EI
Sbjct: 87 DIQPEIERLKSEI 99
>gnl|CDD|235007 PRK02134, PRK02134, hypothetical protein; Provisional.
Length = 249
Score = 30.7 bits (70), Expect = 1.3
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 150 KAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLP 209
+A + +V ST A M+ P I H +LS+E L +H + L+ +P
Sbjct: 24 EAHRNGVVTSTTA---------MVNMPAIDHAVQLSREYPSLGVGMHFVLTAGKPLTAMP 74
>gnl|CDD|176534 cd08592, PI-PLCc_gamma, Catalytic domain of metazoan
phosphoinositide-specific phospholipase C-gamma. This
family corresponds to the catalytic domain present in
metazoan phosphoinositide-specific phospholipase C
(PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a
signaling enzyme that hydrolyzes the membrane
phospholipids phosphatidylinositol-4,5-bisphosphate
(PIP2) to generate two important second messengers in
eukaryotic signal transduction cascades, inositol
1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG).
InsP3 triggers inflow of calcium from intracellular
stores, while DAG, together with calcium, activates
protein kinase C, which goes on to phosphorylate other
molecules, leading to altered cellular activity. Calcium
is required for the catalysis. PI-PLC-gamma represents a
class of mammalian PI-PLC that has an N-terminal
pleckstrin homology (PH) domain, an array of EF hands, a
PLC catalytic core domain, and a C2 domain.The PLC
catalytic core domain is a TIM barrel with two highly
conserved regions (X and Y) split by a highly degenerate
linker sequence. Unique to PI-PLC-gamma, a second PH
domain, two SH2 (Src homology 2) regions, and one SH3
(Src homology 3) region is present within this linker
region. There are two PI-PLC-gamma isozymes (1-2). They
are activated by receptor and non-receptor tyrosine
kinases due to the presence of two SH2 and a single SH3
domain within the linker region. Aside from the two
PI-PLC-gamma isozymes identified in mammals, some
eukaryotic PI-PLC-gamma homologs have been classified
with this subfamily.
Length = 229
Score = 28.2 bits (63), Expect = 6.9
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 174 GTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSI 214
G P I H L+ +I V+ I EH+ S P+ LSI
Sbjct: 56 GMPIIYHGHTLTSKIK-FMDVLKTIKEHAFVTSEYPVILSI 95
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein;
Provisional.
Length = 995
Score = 28.4 bits (64), Expect = 7.9
Identities = 9/23 (39%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 314 NEIINHVIREGLRM-YPIAPFIT 335
++++ V+ GLR+ +P+ PFIT
Sbjct: 774 QDVLHTVLDIGLRLLHPMMPFIT 796
>gnl|CDD|181231 PRK08114, PRK08114, cystathionine beta-lyase; Provisional.
Length = 395
Score = 28.1 bits (63), Expect = 9.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 148 LFKAFEHDIVESTKANNKPIIIAH---MLGT 175
LFKA + I S +A K ++ H M+GT
Sbjct: 193 LFKALDFGIDISIQAGTK-YLVGHSDAMIGT 222
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0753 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,688,862
Number of extensions: 2122187
Number of successful extensions: 2004
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1948
Number of HSP's successfully gapped: 53
Length of query: 423
Length of database: 10,937,602
Length adjustment: 100
Effective length of query: 323
Effective length of database: 6,502,202
Effective search space: 2100211246
Effective search space used: 2100211246
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.8 bits)