RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2144
(423 letters)
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial;
mitochondrial cytochrome P450, monotopic membrane
protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus
norvegicus} PDB: 3k9y_A*
Length = 482
Score = 327 bits (841), Expect = e-108
Identities = 99/426 (23%), Positives = 181/426 (42%), Gaps = 31/426 (7%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
+P P +WP+ G+L+ I +GG K+ H + + H++ G I++ K+G ++ L + +
Sbjct: 26 LPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEA 85
Query: 84 VFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQE 143
++ E +P+ + + W+ YR GL ++G EW + R K L+K +
Sbjct: 86 LYRTESAHPQRLEIKPWKAYRDHRNEAYGLMILEGQEWQRVRSAFQKKLMKPVEIMKLDK 145
Query: 144 LTKELFKAFEHDIVESTKANNKP-------------IIIAHMLGTPFISHYKELSKEIHD 190
E+ F + E + I + F KE +E
Sbjct: 146 KINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALT 205
Query: 191 LSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL----LHKMEPFN 246
+ + + + P+ L +L W + L +
Sbjct: 206 FITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQQP 265
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ 306
G + + +++S + + V + LAA +TTA S WI Y L R+P Q +L QE+Q
Sbjct: 266 GADFLCDIYQQDHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQ 325
Query: 307 K---NNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLL 357
+N E + + ++E +R+ P PF TR + K + Y +PKG+++ L
Sbjct: 326 SVLPDNQTPRAEDLRNMPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTL 385
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ + F +F+P RW + K + P+A LP+ +G R C+GR+LA+ Q+
Sbjct: 386 NTQVLGSSEDNFEDSHKFRPERWLQKEKK-----INPFAHLPFGIGKRMCIGRRLAELQL 440
Query: 418 CLTIAQ 423
L +
Sbjct: 441 HLALCW 446
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450,
cholesterol SIDE chain cleavage, structural genomics,
structural genomics consortium, SGC; HET: HEM CLR; 2.10A
{Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Length = 487
Score = 305 bits (783), Expect = e-100
Identities = 96/436 (22%), Positives = 181/436 (41%), Gaps = 44/436 (10%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
IP+P +E G ++H + + Q+ GPIY+EK+G VE+ ++ D DV
Sbjct: 11 IPSPGDNGWLNLY-HFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVAL 69
Query: 84 VFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL-----KNYSA 138
+F EG P+ L W Y + Y G+ W K R +N+ ++ KN+
Sbjct: 70 LFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFL- 128
Query: 139 GPQQELTKELFKAFEHDIVESTKANNKPI------------IIAHM-LGTPFISHYKELS 185
++++ I ++ N I ++ G + ++
Sbjct: 129 PLLDAVSRDFVSVLHRRIKKAGS-GNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVN 187
Query: 186 KEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL------- 238
E ++++F S + LP +L + W V + + A
Sbjct: 188 PEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWE 247
Query: 239 LHKMEPFNGDGLS--SKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPS 296
L + + D +L +S E I+ V + + DTT+++ QW Y + R+
Sbjct: 248 LRQKGSVHHDYRGILYRLLGDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLK 307
Query: 297 VQDQLYQELQ---KNNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEIRGY 347
VQD L E+ ++ I+E LR++PI+ + R++ D+ +R Y
Sbjct: 308 VQDMLRAEVLAARHQAQGDMATMLQLVPLLKASIKETLRLHPISVTLQRYLVNDLVLRDY 367
Query: 348 LIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSC 407
+IP +LV +++++ P +F PE F P+RW + + +L + G R C
Sbjct: 368 MIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKN-----ITYFRNLGFGWGVRQC 422
Query: 408 VGRKLAQTQMCLTIAQ 423
+GR++A+ +M + +
Sbjct: 423 LGRRIAELEMTIFLIN 438
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase,
metal-binding, heme, iron; HET: HEM REA; 2.10A
{Synechocystis SP} PDB: 2ve4_A*
Length = 444
Score = 204 bits (520), Expect = 3e-61
Identities = 85/432 (19%), Positives = 160/432 (37%), Gaps = 68/432 (15%)
Query: 22 KVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADV 81
+ P P G ++ L +G + +KR Q+ GPI+K ++ F++
Sbjct: 12 PIPPGDFGLPWLGETLNFLNDGD------FGKKRQQQFGPIFKTRLFGKNVIFISGALAN 65
Query: 82 RKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYL----LKNYS 137
R +F E + R L G L G RKI+ + L +Y
Sbjct: 66 RFLFTKEQ---ETFQATWPLSTRILLG-PNALATQMGEIHRSRRKILYQAFLPRTLDSY- 120
Query: 138 AGPQQELTKELFKAFEH----DIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQ 193
+ + + + + + +G +S +L Q
Sbjct: 121 LPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAATLFMGEK-VSQNPQLFPWFETYIQ 179
Query: 194 VVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKM----------E 243
L LPI L T F +S A LL +
Sbjct: 180 ----------GLFSLPIPL-------PNTLF----GKSQR-ARALLLAELEKIIKARQQQ 217
Query: 244 PFNGDG-----LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQ 298
P + + L+++ + +S ++ ++ + A +T + LLG+H ++
Sbjct: 218 PPSEEDALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIR 277
Query: 299 DQLYQELQ--KNNDCLNNEII------NHVIREGLRMYPIAPFITRFMPKDVEIRGYLIP 350
+++ QE + + L E + + V++E LR+ P R + +D + +G+ P
Sbjct: 278 ERVRQEQNKLQLSQELTAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQFQGFHFP 337
Query: 351 KGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGR 410
KG LV + + +P +P PE+F P R+ D + P+A +P+ G R C+G+
Sbjct: 338 KGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSAT---HNPPFAHVPFGGGLRECLGK 394
Query: 411 KLAQTQMCLTIA 422
+ A+ +M L
Sbjct: 395 EFARLEMKLFAT 406
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1,
molecular mechanism, heme, iron, metal-binding,
monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor
A3} PDB: 3el3_A*
Length = 467
Score = 203 bits (519), Expect = 7e-61
Identities = 74/432 (17%), Positives = 151/432 (34%), Gaps = 50/432 (11%)
Query: 17 ATEMSKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLN 76
A E+ + P+ G + ++ + ++ G + + K+GP Y +
Sbjct: 18 APELREPPVAGGGVPLLGHGWRLARDPLAFM------SQLRDHGDVVRIKLGPKTVYAVT 71
Query: 77 DTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMN----KYL 132
+ + + L WE L G + G+ +GP + R+ +
Sbjct: 72 NPELTGALALNPDYHIAGPL---WESLEGLLGKE-GVATANGPLHRRQRRTIQPAFRLDA 127
Query: 133 LKNYSAGPQQELTKELFKAFEH----DIVESTKANNKPIIIAHMLGTPFISHYKELSKEI 188
+ Y +E L + ++ D + + +L ++
Sbjct: 128 IPAY-GPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRGQYMDE------RA 180
Query: 189 HDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL--HKMEPFN 246
L + +F ++P+ +L L A +F +++ L E++ +
Sbjct: 181 ERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASGQK 240
Query: 247 GDGLSSKL-----KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQL 301
D L + L + + + I V+ + +T A + W+ L HP D++
Sbjct: 241 PDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRI 300
Query: 302 YQELQKNNDCLNNEIINH-----------VIREGLRMYPIAPFITRFMPKDVEIRGYLIP 350
E++ + VI E +R+ P +TR + E+ GY IP
Sbjct: 301 RDEVE---AVTGGRPVAFEDVRKLRHTGNVIVEAMRLRPAVWVLTRRAVAESELGGYRIP 357
Query: 351 KGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGR 410
G+ ++ S ++ +P + +F P RW + V YA P++ G R C
Sbjct: 358 AGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAAN----VPKYAMKPFSAGKRKCPSD 413
Query: 411 KLAQTQMCLTIA 422
+ Q+ L A
Sbjct: 414 HFSMAQLTLITA 425
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding,
monooxygenase, NADP, oxidoreductase, protein-inhibitor
complex; HET: HEM CM6; 1.50A {Mycobacterium
tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A*
2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A*
1e9x_A* 1u13_A*
Length = 455
Score = 198 bits (505), Expect = 6e-59
Identities = 67/438 (15%), Positives = 145/438 (33%), Gaps = 76/438 (17%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
G L + +++ ELG + ++ + L+ +
Sbjct: 8 RVSGGHDEHGHLEEFRTDP-----IGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFF 62
Query: 85 F-ALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQE 143
F A + + + ++G G+ D + +
Sbjct: 63 FRAGDDDLDQAKA---YPFMTPIFG--EGV-VFDASPERRKEMLH------------NAA 104
Query: 144 LTKELFKAFEHDIVESTKA------NNKPI------------IIAH-MLGTPFISHYKEL 184
L E K I + + I + ++G F
Sbjct: 105 LRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKFRDQLDGR 164
Query: 185 SKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL--HKM 242
+++ H++ + L+ + L + ++ + E+ + +AL ++++
Sbjct: 165 ------FAKLYHELERGTDPLAYVDPYL----PIESFRRRDEARNGLVALVADIMNGRIA 214
Query: 243 EPFNGDG--------LSSKLKE-VENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR 293
P ++ K + S + I M I + A T++ + W L R
Sbjct: 215 NPPTDKSDRDMLDVLIAVKAETGTPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMR 274
Query: 294 HPSVQDQLYQELQ---KNNDCLNNEII------NHVIREGLRMYPIAPFITRFMPKDVEI 344
H + EL + ++ + +V++E LR++P + R + E+
Sbjct: 275 HRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV 334
Query: 345 RGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGA 404
+G+ I +G LV S S+ P FP P F P+R+++ + +N + +P+ G
Sbjct: 335 QGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLN---RWTWIPFGAGR 391
Query: 405 RSCVGRKLAQTQMCLTIA 422
CVG A Q+ +
Sbjct: 392 HRCVGAAFAIMQIKAIFS 409
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein,
alternative splicing, cholesterol biosynthesis,
endoplasmic reticulum, heme, iron; HET: HEM KLN BCD;
2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Length = 461
Score = 196 bits (501), Expect = 2e-58
Identities = 73/441 (16%), Positives = 153/441 (34%), Gaps = 82/441 (18%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P G I+ K ++E +++ GP++ + +L + +
Sbjct: 15 YIFSPIPFLGHAIAFGKSP-----IEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALL 69
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYS 137
E Y + P ++G Y + P +++ +K++
Sbjct: 70 FNSKNEDLNAEDVYSRLTTP--------VFG-KGVAYDVPNPVFLEQKKML--------- 111
Query: 138 AGPQQELTKELFKAFEHDIVESTKA------NNKPI------------IIAH-MLGTPFI 178
+ L FK I + TK + +H + G
Sbjct: 112 ---KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGKEI- 167
Query: 179 SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL 238
+L++++ L + F S A +LP L L ++ + + + + +
Sbjct: 168 --RSQLNEKVAQLYADLDGGF--SHAAWLLPGWLP----LPSFRRRDRAHREIKDIFYKA 219
Query: 239 L--HKMEPFNGDG-----LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLL 291
+ + D L + K+ ++ + + M+I +LA T++ ++ W+ + L
Sbjct: 220 IQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFL 279
Query: 292 GRHPSVQDQLYQELQ----KNNDCLNNEII------NHVIREGLRMYPIAPFITRFMPKD 341
R ++Q + Y E + +N L + + + I+E LR+ P + R
Sbjct: 280 ARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTP 339
Query: 342 VEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYA 401
+ GY IP G V +S + + F P R+ +D E +A +P+
Sbjct: 340 QTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPAS----GEKFAYVPFG 395
Query: 402 MGARSCVGRKLAQTQMCLTIA 422
G C+G A Q+ +
Sbjct: 396 AGRHRCIGENFAYVQIKTIWS 416
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme,
oxidoreductase, monooxygenase, sterol biosynthesis,
lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A
{Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A*
2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Length = 450
Score = 188 bits (480), Expect = 3e-55
Identities = 73/446 (16%), Positives = 150/446 (33%), Gaps = 90/446 (20%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P + PI G +I K L E + Q I+ I + D + +
Sbjct: 7 VYPVTVPILGHIIQFGKSP----LGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRF 62
Query: 85 FALEGTYPKHILP-QCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQE 143
F + + P + + ++G + Y P + + +E
Sbjct: 63 FL---PRNEVLSPREVYSFMVPVFG-EGVAYAAPYPRMREQLNFL------------AEE 106
Query: 144 LTKELFKAFEHDIVEST--------KANNKPI------------IIAH-MLGTPFISHY- 181
LT F+ F I + I + G
Sbjct: 107 LTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLD 166
Query: 182 -KELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLH 240
+ ++ + + + + + + +KL L + H++ ++L
Sbjct: 167 ARRFAQLLAKMESSLIPA--------AVFLPILLKLPLPQSARC----HEARTELQKILS 214
Query: 241 KM------EPFNGDG---------LSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQ 285
++ E N D LS+ ++ +S + M++ + A T++I+T
Sbjct: 215 EIIIARKEEEVNKDSSTSDLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTT 274
Query: 286 WIFYLLGRHPSVQDQ--LYQELQK------NNDCLNN-EIINHVIREGLRMYPIAPFITR 336
W L +V+ L +E+++ N+ ++ RE +R P + R
Sbjct: 275 WSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMR 334
Query: 337 FMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYA 396
+ DV++ Y++PKG ++ S S H+ FP P ++ P R ++ A
Sbjct: 335 KVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKV----------EGA 384
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
+ + G C+G+K Q+ +A
Sbjct: 385 FIGFGAGVHKCIGQKFGLLQVKTILA 410
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid
complex, riken structural genomics/proteomics
initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus
subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Length = 417
Score = 182 bits (463), Expect = 3e-53
Identities = 66/444 (14%), Positives = 140/444 (31%), Gaps = 105/444 (23%)
Query: 20 MSKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGP-IYKEKIGPVEAYFLNDT 78
M++ IP +++LKEG + +++ R + +++ ++ +
Sbjct: 1 MNEQIPHD---KSLDNSLTLLKEG-----YLFIKNRTERYNSDLFQARLLGKNFICMTGA 52
Query: 79 ADVRKVF-----ALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLL 133
+ + + PK + + L+G + MDG + + +
Sbjct: 53 EAAKVFYDTDRFQRQNALPKRVQ-------KSLFG-VNAIQGMDGSAHIHRKMLF----- 99
Query: 134 KNYSAGPQQELTKELFKAFEHDIVESTKA------NNKPI------------IIAHMLGT 175
+T K + E KA + + + G
Sbjct: 100 -------LSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGV 152
Query: 176 PFI-SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESV------ 228
P + KE + + D+ A ++ P + + +++E +
Sbjct: 153 PLKETEVKERADDFIDMV---------DAFGAVGPRHWKGRRARPRAEEWIEVMIEDARA 203
Query: 229 -----HQSLALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAIS 283
AL H E +G L S++ +E + +L +
Sbjct: 204 GLLKTTSGTALHEMAFHTQE--DGSQLDSRMAAIE-----------LINVLRPIVAISYF 250
Query: 284 TQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVE 343
+ L HP ++ L N+ ++E R YP PF+ + KD
Sbjct: 251 LVFSALALHEHPKYKEWLRSG--------NSREREMFVQEVRRYYPFGPFLGALVKKDFV 302
Query: 344 IRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMG 403
KG+ VLL ++ ++H+P + P++F+P R+ + +P G
Sbjct: 303 WNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAERE-------ENLFDMIPQGGG 355
Query: 404 ----ARSCVGRKLAQTQMCLTIAQ 423
C G + M ++
Sbjct: 356 HAEKGHRCPGEGITIEVMKASLDF 379
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo
sapiens} PDB: 3eqm_A* 3s7s_A*
Length = 503
Score = 184 bits (468), Expect = 4e-53
Identities = 69/431 (16%), Positives = 150/431 (34%), Gaps = 55/431 (12%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
IP P G LIS + + ++ G + I E ++ ++ +
Sbjct: 47 IPGPGYCMGIGPLISHGR-FLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFH 105
Query: 84 VF---ALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYL----LKNY 136
+ + + QC ++ + W R K L L
Sbjct: 106 IMKHNHYSSRFGSKLGLQCIG-----MHEKGIIFNNNPELWKTTRPFFMKALSGPGLVRM 160
Query: 137 SAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHML--------GTPFISHYKELSKEI 188
E K E ES + ++ ML P + +I
Sbjct: 161 -VTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDTSNTLFLRIPLDES--AIVVKI 217
Query: 189 HDLSQVVHKIFEHSAAL-SMLPINLSIKLKLSAWTKFVESV----HQSLALASELLHKME 243
+ + + + + +E + + ++ +L M+
Sbjct: 218 QGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECMD 277
Query: 244 PFNGDGLSSKLKEVEN---VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQ 300
+++L E ++ E++ + +++ ++AA DT ++S ++ +L+ +HP+V++
Sbjct: 278 ------FATELILAEKRGDLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEA 331
Query: 301 LYQELQK---NNDCLNNEIIN-----HVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKG 352
+ +E+Q D ++I + I E +R P+ + R +D I GY + KG
Sbjct: 332 IIKEIQTVIGERDIKIDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVIDGYPVKKG 391
Query: 353 SLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKL 412
+ ++L++ H +FP P +F + ++ P+ G R C G+ +
Sbjct: 392 TNIILNIG-RMHRLEFFPKPNEFTLENFAKNVP--------YRYFQPFGFGPRGCAGKYI 442
Query: 413 AQTQMCLTIAQ 423
A M +
Sbjct: 443 AMVMMKAILVT 453
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase,
structural genomics, structural genomics consortium,
SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo
sapiens} PDB: 3sn5_A*
Length = 491
Score = 182 bits (463), Expect = 1e-52
Identities = 69/445 (15%), Positives = 133/445 (29%), Gaps = 65/445 (14%)
Query: 25 PTPRSW-PIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
P P G + G ++ ++ G ++ K+ +F+ + K
Sbjct: 16 PLENGLIPYLGCALQF-----GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHK 70
Query: 84 VFALEGTYPKHILPQCWEKY-----RKLYGCDRGLYFMDGPEWMKYRKIMNKYL----LK 134
V H W+K+ K +G R + MDG K L L
Sbjct: 71 VL-------CHGKYFDWKKFHFATSAKAFG-HRSIDPMDGNTTENINDTFIKTLQGHALN 122
Query: 135 NYSAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHMLG---------TPFISHYKELS 185
+ + + L + + S A + T F
Sbjct: 123 SLTESMMENLQRIMRPPVSS---NSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTRRD 179
Query: 186 KEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPF 245
+ + + + L L I + +A E + +SL + +
Sbjct: 180 TQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAH-NAREKLAESLRHENLQKRESISE 238
Query: 246 NGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQEL 305
+ + + + A+ T +T W + + R+P +E+
Sbjct: 239 LISLRMFLNDTLSTFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEV 298
Query: 306 QK-------------NNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEIR- 345
++ N CL+ +N +I+E LR+ + I R +D +
Sbjct: 299 KRTLENAGQKVSLEGNPICLSQAELNDLPVLDSIIKESLRLSSASLNI-RTAKEDFTLHL 357
Query: 346 ---GYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRW-----KRDANKKYINVVEPYAS 397
Y I K ++ L +P +P P F+ R+ K + Y
Sbjct: 358 EDGSYNIRKDDIIALYPQLMHLDPEIYPDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYY 417
Query: 398 LPYAMGARSCVGRKLAQTQMCLTIA 422
+P+ GA C GR A ++ +
Sbjct: 418 MPFGSGATICPGRLFAIHEIKQFLI 442
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic
resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus
megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A*
1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A*
2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A*
2ij3_A* 2ij4_A* 3hf2_A* ...
Length = 470
Score = 174 bits (444), Expect = 5e-50
Identities = 73/436 (16%), Positives = 164/436 (37%), Gaps = 62/436 (14%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
+P P+++ L + + + L + ++ LG I+K + +L+ +++
Sbjct: 5 MPQPKTFGELKNLPLLNTDKPVQALMKIADE----LGEIFKFEAPGRVTRYLSSQRLIKE 60
Query: 84 VFALEGTYPKHILPQCWEKYRKLYGCDRGLY--FMDGPEWMKYRKIMN----KYLLKNYS 137
E + K++ + R G GL+ + W K I+ + +K Y
Sbjct: 61 ACD-ESRFDKNLSQA-LKFVRDFAG--DGLFTSWTHEKNWKKAHNILLPSFSQQAMKGY- 115
Query: 138 AGPQQELTKELFKAFEHDIVESTKANNKPI------------IIAH-MLGTPFISHYKEL 184
++ +L + +E ++ I I F S Y++
Sbjct: 116 HAMMVDIAVQLVQKWER------LNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRD- 168
Query: 185 SKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEP 244
+ H + + + + N +F E + L +++ +
Sbjct: 169 --QPHPFITSMVRALDEAMNKLQRA-NPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA 225
Query: 245 FNGDG-------LSSKLKEV-ENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPS 296
L+ K E E + E+IR +I F++A +TT+ + Y L ++P
Sbjct: 226 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 285
Query: 297 VQDQLYQELQK-------NNDCLNN-EIINHVIREGLRMYPIAPFITRFMPKDVEIRG-Y 347
V + +E + + + + + V+ E LR++P AP + + +D + G Y
Sbjct: 286 VLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEY 345
Query: 348 LIPKGSLVLLSVFSSSHNPAYFPS-PEQFQPSRWKRDANKKYINVVEPYASLPYAMGARS 406
+ KG +++ + + + E+F+P R++ + +A P+ G R+
Sbjct: 346 PLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAI------PQHAFKPFGNGQRA 399
Query: 407 CVGRKLAQTQMCLTIA 422
C+G++ A + L +
Sbjct: 400 CIGQQFALHEATLVLG 415
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase,
oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas
paucimobilis} PDB: 3awq_A* 3awp_A*
Length = 415
Score = 173 bits (440), Expect = 7e-50
Identities = 57/427 (13%), Positives = 129/427 (30%), Gaps = 77/427 (18%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGP-IYKEKIGPVEAYFLNDTADVR 82
+P +S+L + +R++ ++ Q LG ++ + + L
Sbjct: 1 MPKTPHTKGPDETLSLLADP-----YRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE 55
Query: 83 KVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQ 142
+ + +P + L G G+ +DG +++
Sbjct: 56 IFYDTTRFEREGAMPV--AIQKTLLG-QGGVQGLDGETHRHRKQMF------------MG 100
Query: 143 ELTKELFKAFEHDIVESTKA------NNKPI------------IIAHMLGTPFISHYKEL 184
+T E +A + I + G P E
Sbjct: 101 LMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAWAGVPLPDD--EA 158
Query: 185 SKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEP 244
+L + AA S P +L +L + + + +
Sbjct: 159 GNRAGELRALF------DAAGSASPRHLWSRLARRRVDAWAK------RIIEGIRAGSIG 206
Query: 245 FNGDGLSSKL----KEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQ 300
+ + +++ + + + +L A+ ++ + L ++
Sbjct: 207 SGSGTAAYAIAWHRDRHDDLLSPHVAAVELVNVLRPTVAIAVYITFVAHALQTCSGIRAA 266
Query: 301 LYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVF 360
L Q+ + ++E R YP P + +D E G P+G V+L ++
Sbjct: 267 LVQQP---------DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLY 317
Query: 361 SSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMG----ARSCVGRKLAQTQ 416
S+H+ A + P++F+P R++ + + +P G C G +
Sbjct: 318 GSNHDAATWADPQEFRPERFRAWD-------EDSFNFIPQGGGDHYLGHRCPGEWIVLAI 370
Query: 417 MCLTIAQ 423
M +
Sbjct: 371 MKVAAHL 377
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide,
monooxygenase, metab enzyme, oxidoreductase, heme,
cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo
sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A*
Length = 456
Score = 171 bits (436), Expect = 6e-49
Identities = 80/425 (18%), Positives = 145/425 (34%), Gaps = 74/425 (17%)
Query: 44 GGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKVFALEGTYPKHILPQCWEKY 103
GG+ L ++ GP+ + + + + V+K K+ +
Sbjct: 8 GGRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST----KYNKDSKMYRA 63
Query: 104 RKLYGCDRGLY-----FMDGPEWMKYRKIMN-----KYLLKNYSAGPQQELTKELFKAFE 153
+ +R + W K R++++ L L + F
Sbjct: 64 LQTVFGERLFGQGLVSECNYERWHKQRRVIDLAFSRSSL-------------VSLMETFN 110
Query: 154 H------DIVESTKANNKPIIIAHMLG---------TPFISHYKELSKEIHDLSQVVHKI 198
+I+E+ P+ + ML F L LSQ V +
Sbjct: 111 EKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLM 170
Query: 199 FEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKM-----------EPFNG 247
E A L K + V +S+ ++ E
Sbjct: 171 LEGITASRNTLAKF-----LPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPA 225
Query: 248 DGLSSKLK-EVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ 306
D L+ LK E E + + F +A +T+A + L R P + +L E+
Sbjct: 226 DILTQILKAEEGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVD 285
Query: 307 ---KNNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLL 357
+ L+ E + V++E LR+YP A R + ++ I G +P + +L
Sbjct: 286 EVIGSKRYLDFEDLGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLF 345
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
S + YF P F P R+ A K + P+++G RSC+G++ AQ ++
Sbjct: 346 STYVMGRMDTYFEDPLTFNPDRFGPGAPKP------RFTYFPFSLGHRSCIGQQFAQMEV 399
Query: 418 CLTIA 422
+ +A
Sbjct: 400 KVVMA 404
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450
8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio}
PDB: 3b99_A*
Length = 475
Score = 163 bits (415), Expect = 8e-46
Identities = 71/428 (16%), Positives = 145/428 (33%), Gaps = 51/428 (11%)
Query: 25 PTPRSW-PIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
P + P G + GK +++ + ++ G I+ + + L D+
Sbjct: 21 PLDKGMIPWLGHALEF-----GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDA 75
Query: 84 VF-----ALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMN--KYLLKNY 136
V + +Y + ++ ++++ PE K R M+ L
Sbjct: 76 VLSDVASLDQTSYAQVLM-------KRIFNMI---LPSHNPESEKKRAEMHFQGASLTQL 125
Query: 137 SAGPQQELTKELFKAFEHDIVESTKANNKPI--IIAHML-GTPFISHYKELSKEIHDLSQ 193
S Q L + + +++++ + + +L T +++ + + L+Q
Sbjct: 126 SNSMQNNLRLLMTPSEMG--LKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNSAALTQ 183
Query: 194 VVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGDGLSS- 252
+ + L L K + + E + + L + +P L S
Sbjct: 184 IYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWL---TPSGLDRKPREQSWLGSY 240
Query: 253 -KLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDC 311
K + E + E RR ++ + + W+ L HP + +E+Q
Sbjct: 241 VKQLQDEGIDAEMQRRAMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQGGKHL 300
Query: 312 LNNEIINH------VIREGLRMYPIAPFITRFMPKDVEI-----RGYLIPKGSLVLLSVF 360
E + V+ E LR+ A ITR + +D +I + Y + +G + + F
Sbjct: 301 RLEERQKNTPVFDSVLWETLRLTAAAL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPF 359
Query: 361 SSSH-NPAYFPSPEQFQPSRW-----KRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
S +P PE FQ R+ + Y S+P+ C GR A
Sbjct: 360 ISPQMDPQIHQQPEMFQFDRFLNADRTEKKDFFKNGARVKYPSVPWGTEDNLCPGRHFAV 419
Query: 415 TQMCLTIA 422
+ +
Sbjct: 420 HAIKELVF 427
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus
thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Length = 389
Score = 157 bits (398), Expect = 6e-44
Identities = 68/417 (16%), Positives = 127/417 (30%), Gaps = 87/417 (20%)
Query: 24 IPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
+ +WP L + + + P + + D V
Sbjct: 4 LSLREAWPYLKDLQ--------QDPLAVLLAWGRA-HPRLFLPLPRFPLALIFDPEGVEG 54
Query: 84 VFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQE 143
L K + +L G RGL G W + RK + +
Sbjct: 55 AL-LAEGTTKA--TFQYRALSRLTG--RGLLTDWGESWKEARKAL------------KDP 97
Query: 144 LTKELFKAFEHDIVESTKA-----NNKPI------------IIAH-MLGTPFISHYKELS 185
+ + + + E +A + ++ + G P E
Sbjct: 98 FLPKNVRGYREAMEEEARAFFGEWRGEERDLDHEMLALSLRLLGRALFGKPLSPSLAEH- 156
Query: 186 KEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPF 245
K + A + P+ L L L+A +F + A L+
Sbjct: 157 ---------ALKALDRIMAQTRSPLAL---LDLAAEARFRKDRGALYREAEALIVHP--- 201
Query: 246 NGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQEL 305
L E + ++A +T A + W F LL P Q ++ +
Sbjct: 202 PLSHLP----------RERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESE 251
Query: 306 QKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHN 365
+ +E LR+YP A +TR + + + + +P G+ ++LS + +
Sbjct: 252 E---------AALAAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRL 302
Query: 366 PAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
FP E F+P R+ + P+ +G R C+GR A + + +
Sbjct: 303 H--FPDGEAFRPERFLEERGT------PSGRYFPFGLGQRLCLGRDFALLEGPIVLR 351
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome
P450, endoplasmic reticulum, fatty acid biosynthesis,
heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo
sapiens} PDB: 2iag_A*
Length = 498
Score = 156 bits (397), Expect = 5e-43
Identities = 68/446 (15%), Positives = 133/446 (29%), Gaps = 68/446 (15%)
Query: 25 PTPRSW-PIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRK 83
P P G + GK ++ + ++ G I+ +G L D
Sbjct: 21 PLDLGSIPWLGYALDF-----GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDA 75
Query: 84 V-------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNY 136
V + +++ ++ E + + + L+
Sbjct: 76 VVWEPRTRLDFHAYAIFLM--------ERIFDVQ-LPHYSPSDEKARMKLTLLHRELQAL 126
Query: 137 SAGPQQELTKELFKAFEHDIVESTKANNKPI-------IIAHML-GTPFISHYKELSKEI 188
+ L L + L G + E +
Sbjct: 127 TEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRTHESQAQD 186
Query: 189 HDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLA--LASELLHKME--- 243
S V F +LP L + + SV L L+ L +
Sbjct: 187 RVHSADVFHTFRQLD--RLLPKLARGSLSVGDK-DHMCSVKSRLWKLLSPARLARRAHRS 243
Query: 244 PFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQ 303
+ L + VS E R ++ + A + W+ L ++P +
Sbjct: 244 KWLESYLLHLEEM--GVSEEMQARALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRG 301
Query: 304 ELQK----------NNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEI--- 344
EL+ L ++++ V+ E LR+ APFITR + D+ +
Sbjct: 302 ELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLTA-APFITREVVVDLAMPMA 360
Query: 345 --RGYLIPKGSLVLLS-VFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVE-----PYA 396
R + + +G +LL S +P + PE F+ +R+ + + +
Sbjct: 361 DGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNPDGSEKKDFYKDGKRLKNY 420
Query: 397 SLPYAMGARSCVGRKLAQTQMCLTIA 422
++P+ G C+GR A + +
Sbjct: 421 NMPWGAGHNHCLGRSYAVNSIKQFVF 446
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid
biosynthesis, heme, iron, synthesis, lyase,
metal-binding, oxylipin biosynthesis; HET: HEM T25;
1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A*
3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Length = 495
Score = 145 bits (366), Expect = 8e-39
Identities = 70/444 (15%), Positives = 144/444 (32%), Gaps = 53/444 (11%)
Query: 22 KVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGP-IYKEKIGP-------VEAY 73
+ IP PI G + + + + R ++ +Y+ + P +
Sbjct: 28 RNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVV 87
Query: 74 FLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPE-WMKYRKIMNKYL 132
L D +F ++ K +L + +L G R L ++D E + K + +L
Sbjct: 88 ALLDGKSFPVLFDVDKVEKKDLLTGTYMPSTELTGGYRILSYLDPSEPKHEKLKNLLFFL 147
Query: 133 LKNYSAG--PQ-QELTKELFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIH 189
LK+ P+ Q ELF + E ++ KA+ F++ +
Sbjct: 148 LKSSRNRIFPEFQATYSELFDSLEKELSLKGKADFGGSSDGTAFN--FLA---RAFYGTN 202
Query: 190 DLSQVV----HKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPF 245
+ + ++ P+ LSI L + + AL ++ F
Sbjct: 203 PADTKLKADAPGLITKWVLFNLHPL-LSIGLPRVIEEPLIHTFSLPPALVKSDYQRLYEF 261
Query: 246 NGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRH-----PSVQDQ 300
+ L E + + S + + A T + +F + + V ++
Sbjct: 262 FLESAGEILVEADKLG-ISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNR 320
Query: 301 LYQE----LQKNNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEI----RG 346
L +E ++ N L I V+ E LR P KD+ I
Sbjct: 321 LAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAA 380
Query: 347 YLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPY------ 400
+ + G ++ ++ +P F ++F P R+ + + +
Sbjct: 381 FKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFV-GEEGEKLL---RHVLWSNGPETET 436
Query: 401 -AMGARSCVGRKLAQTQMCLTIAQ 423
+G + C G+ L + +
Sbjct: 437 PTVGNKQCAGKDFVVLVARLFVIE 460
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty
acid biosynthesis, heme, iron, lipid synthesis, lyase,
metal-binding; HET: HEM; 1.80A {Parthenium argentatum}
PDB: 3dam_A* 3dbm_A*
Length = 473
Score = 134 bits (338), Expect = 5e-35
Identities = 70/448 (15%), Positives = 138/448 (30%), Gaps = 60/448 (13%)
Query: 22 KVIPTPRSWPIFGTLISILKEGGGK-QLHRYVEKRHQELG-PIYKEKIGPVEAYFLN--- 76
+ IP P F + L+ G Y R Q+ +++ + P N
Sbjct: 9 REIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKV 68
Query: 77 ----DTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDG--PEWMKYRKIMNK 130
D +F + K + + KL G R L ++D P + + ++
Sbjct: 69 IVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGGYRVLSYLDPSEPRHAQLKNLL-F 127
Query: 131 YLLKNYSAGPQQELTK---ELFKAFEHDIVESTKANNKPIIIAHMLGTPFISHYKELSKE 187
++LKN S + ELF+ E ++ ++ KA + F+
Sbjct: 128 FMLKNSSNRVIPQFETTYTELFEGLEAELAKNGKAAFNDVGEQAAFR--FLG---RAYFN 182
Query: 188 IHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPFNG 247
+ + + +L NL+ L L E + + L + L+
Sbjct: 183 SNPEETKLGTSAPTLISSWVLF-NLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLY 241
Query: 248 DGLSSKLKEVEN-------VSPESIRRMVIDFILAAGDTTAISTQWIFYLLGR-HPSVQD 299
D S V E++ ++ I +G ++
Sbjct: 242 DYFQSVATPVMEQAEKLGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHT 301
Query: 300 QLYQELQ-----KNNDCLNNEIINH------VIREGLRMYPIAPFITRFMPKDVEIRG-- 346
QL +E++ + + E I V+ E LR+ P P + I
Sbjct: 302 QLAEEIRGAIKSYGDGNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHD 361
Query: 347 --YLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLP----- 399
+ + KG ++ ++ +P F PE++ P R+ D +
Sbjct: 362 ATFEVKKGEMLFGYQPFATKDPKVFDRPEEYVPDRFVGDGEA-------LLKYVWWSNGP 414
Query: 400 ----YAMGARSCVGRKLAQTQMCLTIAQ 423
+ + C G+ L + +
Sbjct: 415 ETESPTVENKQCAGKDFVVLITRLFVIE 442
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold,
hemoprotein, monoo cytochrome P450 reductase,
endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo
sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A*
1tqn_A* 3ua1_A* 3tjs_A*
Length = 485
Score = 130 bits (330), Expect = 1e-33
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 13/161 (8%)
Query: 272 FILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQ---KNNDCLNNEIINH------VIR 322
FI A +TT+ +I Y L HP VQ +L +E+ N + + V+
Sbjct: 280 FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVN 339
Query: 323 EGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKR 382
E LR++PIA + R KDVEI G IPKG +V++ ++ +P Y+ PE+F P R+
Sbjct: 340 ETLRLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERF-S 398
Query: 383 DANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIAQ 423
NK I+ PY P+ G R+C+G + A M L + +
Sbjct: 399 KKNKDNID---PYIYTPFGSGPRNCIGMRFALMNMKLALIR 436
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1,
P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme
protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Length = 494
Score = 124 bits (314), Expect = 2e-31
Identities = 88/453 (19%), Positives = 163/453 (35%), Gaps = 89/453 (19%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
+ S P+ G+L + +H K ++ GPIY ++G + ++V
Sbjct: 11 KSLLSLPLVGSLPFL---PRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEV 67
Query: 85 FALEGTY----PKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRKIMNKYLLKNYSAG 139
+G P+ +G+ F D G W +R++ + G
Sbjct: 68 LIKKGKDFSGRPQMAT------LDIASNNRKGIAFADSGAHWQLHRRLAMATF-ALFKDG 120
Query: 140 PQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPFISHY 181
Q + L N + I +I+ + F + Y
Sbjct: 121 DQKLEKIICQEISTLCDMLA-------THNGQSIDISFPVFVAVTNVISLIC---FNTSY 170
Query: 182 KELSKEIHDLSQVVHKIFEHSAALS---MLPINLSIKLK---LSAWTKFVESVHQSLALA 235
K E++ + I ++ + S ++P LK K V L
Sbjct: 171 KNGDPELNVIQNYNEGIIDNLSKDSLVDLVPW-----LKIFPNKTLEKLKSHVKIRNDLL 225
Query: 236 SE---------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFIL 274
++ + KM NG+ + + E +S I + D
Sbjct: 226 NKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGPDQ--DSELLSDNHILTTIGDIFG 283
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINHVIREGL 325
A +TT +W L +P V+ +LY+E+ +N +D ++ IRE L
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 326 RMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDA 384
R+ P+AP I D I + + KG+ V++++++ HN + P+QF P R+ +
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERF-LNP 402
Query: 385 NKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ + LP+ G RSC+G LA+ ++
Sbjct: 403 AGTQLI-SPSVSYLPFGAGPRSCIGEILARQEL 434
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug
metabolism, structural genomics, structural genomics
consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens}
SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Length = 481
Score = 122 bits (309), Expect = 7e-31
Identities = 87/462 (18%), Positives = 156/462 (33%), Gaps = 113/462 (24%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P G + S+ H Y+ K+ Q G I+ +G + LN V++
Sbjct: 15 PGPPGLPFIGNIYSLAASSELP--HVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKEC 72
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRK--IMNKYLLK 134
FA P GL G W+ +R+ + + +
Sbjct: 73 LVHQSEIFADRPCLP----------LFMKMTKMGGLLNSRYGRGWVDHRRLAVNS---FR 119
Query: 135 NYSAGPQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTP 176
+ G + E TK A E +P I ++
Sbjct: 120 YFGYGQKSFESKILEETKFFNDAIE-------TYKGRPFDFKQLITNAVSNITNLII--- 169
Query: 177 FISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINL---SIKLKLSAWTKFVESVHQSLA 233
F + + + ++ + E +A+ S+ N L + +
Sbjct: 170 FGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYD 229
Query: 234 LASE--------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFI 273
S L +M+ K S E++ V + I
Sbjct: 230 FLSRLIEKASVNRKPQLPQHFVDAYLDEMD-------QGKNDPSSTFSKENLIFSVGELI 282
Query: 274 LAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII---------------- 317
+A +TT +W + +P++Q Q+ +E+ + I+
Sbjct: 283 IAGTETTTNVLRWAILFMALYPNIQGQVQKEI--------DLIMGPNGKPSWDDKCKMPY 334
Query: 318 -NHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQF 375
V+ E LR I P I +D +RGY IPKG+ V+ +++S + Y+ PE F
Sbjct: 335 TEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVF 394
Query: 376 QPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
P R+ D++ + A +P+++G R C+G LA+ +M
Sbjct: 395 HPERF-LDSSGYFAK---KEALVPFSLGRRHCLGEHLARMEM 432
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing
enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8-
benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo
sapiens}
Length = 495
Score = 120 bits (304), Expect = 4e-30
Identities = 91/459 (19%), Positives = 154/459 (33%), Gaps = 99/459 (21%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P WP+ G ++++ GK H + + Q G + + +IG L+ +R+
Sbjct: 19 PEPWGWPLLGHVLTL-----GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQA 73
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFM--DGPEWMKYRKIMNKYLLKN 135
F L + L F GP W R++ L
Sbjct: 74 LVRQGDDFKGRPDLY----------TSTLITDGQSLTFSTDSGPVWAARRRLAQNAL-NT 122
Query: 136 YSAGPQQELTKELFKAFEHDIVES--------TKANNKPI--------------IIAHML 173
+S + E + + + P +I M
Sbjct: 123 FSIA--SDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYNQVVVSVANVIGAMC 180
Query: 174 GTPFISHYKELSKEIHDLSQVVHKIFEHSAA---LSMLPINLSIKLKLSAWTKFVESVHQ 230
F H+ E S E+ L + H+ E +++ L PI L L A +F +
Sbjct: 181 ---FGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPI-LRY-LPNPALQRFKAFNQR 235
Query: 231 SLALASELL--HKMEPFNG-------DGLSSKLKEVENVSP-----ESIRRMVIDFILAA 276
L + + H + F+ L K+ S E I +V D A
Sbjct: 236 FLWFLQKTVQEHY-QDFDKNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAG 294
Query: 277 GDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII-----------------NH 319
DT + W L P +Q ++ +EL + +I
Sbjct: 295 FDTVTTAISWSLMYLVTKPEIQRKIQKEL--------DTVIGRERRPRLSDRPQLPYLEA 346
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPS 378
I E R PF I +D + G+ IPK V ++ + +H+P + P +F+P
Sbjct: 347 FILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPE 406
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
R+ A+ IN + + MG R C+G LA+ ++
Sbjct: 407 RF-LTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEI 444
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing
enzyme, coumarin 7-hydroxylase, nicotine oxidase,
oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB:
1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A*
2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Length = 476
Score = 119 bits (300), Expect = 9e-30
Identities = 78/460 (16%), Positives = 165/460 (35%), Gaps = 108/460 (23%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P G + + +Q++ + K + GP++ +GP L VR+
Sbjct: 13 PGPTPLPFIGNYLQL----NTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREA 68
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRK--IMNKYLLKN 135
F+ G G+ F +G + R+ I L++
Sbjct: 69 LVDQAEEFSGRGEQA----------TFDWVFKGYGVVFSNGERAKQLRRFSIAT---LRD 115
Query: 136 YSAGPQ------QELTKELFKAFE---------HDIVESTKANNKPIIIAHMLGTPFISH 180
+ G + QE L A + T +N +I+ ++ F
Sbjct: 116 FGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSN----VISSIV---FGDR 168
Query: 181 YKELSKEIHDLSQVVHKIFEH-SAALSMLPINLSIKLKL--SAWTKFVESVHQSLALASE 237
+ KE L +++ IF+ S + L S +K + + + ++
Sbjct: 169 FDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAK 228
Query: 238 --------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAG 277
L +M+ + + +++ ++ +
Sbjct: 229 KVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTE-------FYLKNLVMTTLNLFIGGT 281
Query: 278 DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII-----------------NHV 320
+T + + ++ F LL +HP V+ ++++E+ + +I V
Sbjct: 282 ETVSTTLRYGFLLLMKHPEVEAKVHEEI--------DRVIGKNRQPKFEDRAKMPYMEAV 333
Query: 321 IREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
I E R + P + R + KD + R + +PKG+ V + S +P++F +P+ F P
Sbjct: 334 IHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQH 393
Query: 380 WKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCL 419
+ + + + A +P+++G R+C G LA+ ++ L
Sbjct: 394 F-LNEKGQ---FKKSDAFVPFSIGKRNCFGEGLARMELFL 429
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase,
acetaminophen, oxidoreductase, heme, endoplasmic
reticulum, iron, membrane; HET: HEM; 2.20A {Homo
sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Length = 476
Score = 119 bits (300), Expect = 1e-29
Identities = 89/463 (19%), Positives = 163/463 (35%), Gaps = 109/463 (23%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P PI G L + K + + + Q GP++ +G ++ V++
Sbjct: 13 PGPFPLPIIGNLFQL----ELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEA 68
Query: 85 FALEGTY----PKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRK--IMNKYLLKNYSA 138
G+ F +GP W R+ + L+NY
Sbjct: 69 LLDYKDEFSGRGDLPAFHAHRDR--------GIIFNNGPTWKDIRRFSLTT---LRNYGM 117
Query: 139 GPQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPFISH 180
G Q Q L +A K +P +IA +L F H
Sbjct: 118 GKQGNESRIQREAHFLLEALR-------KTQGQPFDPTFLIGCAPCNVIADIL---FRKH 167
Query: 181 YKELSKEIHDLSQVVHKIFEH-SAALSMLPINLSIKLKL--SAWTKFVESVHQSLALASE 237
+ ++ L + ++ F S L N L + K +++V + SE
Sbjct: 168 FDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSE 227
Query: 238 --------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAG 277
LL +ME + + I V D A
Sbjct: 228 RVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERL-------YTMDGITVTVADLFFAGT 280
Query: 278 DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII-----------------NHV 320
+TT+ + ++ +L ++P ++++L++E+ + +I + V
Sbjct: 281 ETTSTTLRYGLLILMKYPEIEEKLHEEI--------DRVIGPSRIPAIKDRQEMPYMDAV 332
Query: 321 IREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+ E R + P + +D RGYLIPKG++V+ ++ S ++ FP PE+F+P
Sbjct: 333 VHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEH 392
Query: 380 WKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
+ + N K+ P++ G R C G LA+ ++ L +
Sbjct: 393 F-LNENGKFKY---SDYFKPFSTGKRVCAGEGLARMELFLLLC 431
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme,
oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP:
a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A*
2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Length = 477
Score = 118 bits (299), Expect = 2e-29
Identities = 89/466 (19%), Positives = 170/466 (36%), Gaps = 114/466 (24%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P+ G ++ I G K + + + + GP++ G L+ V++
Sbjct: 14 PGPTPLPVIGNILQI----GIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEA 69
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRK--IMNKYLLKN 135
F+ G +P + G+ F +G +W + R+ +M L+N
Sbjct: 70 LIDLGEEFSGRGIFP----------LAERANRGFGIVFSNGKKWKEIRRFSLMT---LRN 116
Query: 136 YSAGPQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPF 177
+ G + QE + L + K P +I ++ F
Sbjct: 117 FGMGKRSIEDRVQEEARCLVEELR-------KTKASPCDPTFILGCAPCNVICSII---F 166
Query: 178 ISHYKELSKEIHDLSQVVHKIFE-HSAALSMLPINLSIKLK--LSAWTKFVESVHQSLAL 234
+ ++ +L + +++ + S+ + N S + K +++V +
Sbjct: 167 HKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSY 226
Query: 235 ASE--------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFIL 274
E L KME + S + ES+ +D
Sbjct: 227 ILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSE-------FTIESLENTAVDLFG 279
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII----------------- 317
A +TT+ + ++ LL +HP V ++ +E+ +I
Sbjct: 280 AGTETTSTTLRYALLLLLKHPEVTAKVQEEI--------ERVIGRNRSPCMQDRSHMPYT 331
Query: 318 NHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQ 376
+ V+ E R + P + + D++ R YLIPKG+ +L+S+ S H+ FP+PE F
Sbjct: 332 DAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFD 391
Query: 377 PSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
P + D N + +P++ G R CVG LA ++ L +
Sbjct: 392 PHHF-LDEGG---NFKKSKYFMPFSAGKRICVGEALAGMELFLFLT 433
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase;
HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Length = 479
Score = 118 bits (297), Expect = 3e-29
Identities = 87/459 (18%), Positives = 164/459 (35%), Gaps = 106/459 (23%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P G L+ + + ++ + G ++ ++ LN A VR+
Sbjct: 13 PGPLPLPGLGNLLHV----DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREA 68
Query: 85 FALEGTY----PKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRK--IMNKYLLKNYS 137
G P + Q + G ++ GP W + R+ + L+N
Sbjct: 69 LVTHGEDTADRPPVPITQILGFGPRSQG----VFLARYGPAWREQRRFSVST---LRNLG 121
Query: 138 AGPQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPFIS 179
G + E L AF + +P +IA +
Sbjct: 122 LGKKSLEQWVTEEAACLCAAFA-------NHSGRPFRPNGLLDKAVSNVIASLT---CGR 171
Query: 180 HYKELSKEIHDLSQVVHKIFEHSAALSMLPINL------------SIKLKLSAWTKFVES 227
++ L + + + + +N + A+ ++
Sbjct: 172 RFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDE 231
Query: 228 V---HQ-SLALASE-------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAA 276
+ H+ + A L +ME G+ SS + E++R +V D A
Sbjct: 232 LLTEHRMTWDPAQPPRDLTEAFLAEMEKAKGNPESS-------FNDENLRIVVADLFSAG 284
Query: 277 GDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII-----------------NH 319
TT+ + W L+ HP VQ ++ QE+ +++I
Sbjct: 285 MVTTSTTLAWGLLLMILHPDVQRRVQQEI--------DDVIGQVRRPEMGDQAHMPYTTA 336
Query: 320 VIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPS 378
VI E R I P +T +D+E++G+ IPKG+ ++ ++ S + A + P +F P
Sbjct: 337 VIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPE 396
Query: 379 RWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ DA ++ P A LP++ G R+C+G LA+ ++
Sbjct: 397 HF-LDAQGHFVK---PEAFLPFSAGRRACLGEPLARMEL 431
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET:
HEM 3QZ; 3.00A {Bos taurus}
Length = 496
Score = 117 bits (296), Expect = 4e-29
Identities = 78/454 (17%), Positives = 153/454 (33%), Gaps = 103/454 (22%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P+ + +L L ++ Q+LGP+Y+ ++G E LN + +
Sbjct: 26 RNLHLPPLVPGFLHLL----QPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEA 81
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRKI--MNKYLLK 134
FA P Y+ + + + D W ++K+ L
Sbjct: 82 MIRKWVDFAGRPQIPS---------YKLVSQRCQDISLGDYSLLWKAHKKLTRSA---LL 129
Query: 135 NYSAGPQ----QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPFI 178
+ +LT+E + P+ II ++ F
Sbjct: 130 LGTRSSMEPWVDQLTQEFCERMR-------VQAGAPVTIQKEFSLLTCSIICYLT---FG 179
Query: 179 SHYKELSKEIHDLSQVVHKIFEHSAA--LSMLPINLSIKLKLSAWTKFVESVHQSLALAS 236
+ L HD Q + K ++H + L M+P L + +++ +
Sbjct: 180 NKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPF-LRF-FPNPGLWRLKQAIENRDHMVE 237
Query: 237 E--------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAA 276
+ +L + + +L E + V+D +
Sbjct: 238 KQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE------GHVHMSVVDLFIGG 291
Query: 277 GDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---NDCLNNEIINH---------VIREG 324
+TTA + W L HP +Q +L +EL + + I E
Sbjct: 292 TETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEV 351
Query: 325 LRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRD 383
LR+ P+ P + + I GY IP+G +V+ ++ + + + P +F+P R+ +
Sbjct: 352 LRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRF-LE 410
Query: 384 ANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
++L + GAR C+G LA+ ++
Sbjct: 411 PGAN-------PSALAFGCGARVCLGESLARLEL 437
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase,
alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase;
HET: HEM BHF; 2.70A {Homo sapiens}
Length = 507
Score = 116 bits (293), Expect = 1e-28
Identities = 76/469 (16%), Positives = 159/469 (33%), Gaps = 116/469 (24%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P +WP+ G ++ G+ H + + G +++ ++G LN + +
Sbjct: 12 PGPFAWPLIGNAAAV-----GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQA 66
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMD-GPEWMKYRKI-MNKYLLKN 135
FA ++ ++ R + F W R+ + ++N
Sbjct: 67 LVQQGSAFADRPSFA----------SFRVVSGGRSMAFGHYSEHWKVQRRAAHSM--MRN 114
Query: 136 YSAGP-----------QQELTKELFKAFEHDIVESTKANNKPI-------IIAHMLGTPF 177
+ E +EL + + +P+ +++ + F
Sbjct: 115 FFTRQPRSRQVLEGHVLSE-ARELVALLVRGSADGAFLDPRPLTVVAVANVMSAVC---F 170
Query: 178 ISHYKELSKEIHDLSQVVHKIFEHSAA---------LSMLPINLSIKLK-----LSAWTK 223
Y E +L + A L P + + ++
Sbjct: 171 GCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSN 230
Query: 224 FVESV---HQ-SLALASE-------LLHKMEPFNGDGLSSKLKEVENVSPES------IR 266
F+ H SL + + E K ++ + +
Sbjct: 231 FILDKFLRHCESLRPGAAPRDMMDAFILSAE---------KKAAGDSHGGGARLDLENVP 281
Query: 267 RMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEII--------- 317
+ D A+ DT + + QW+ L R+P VQ ++ EL ++++
Sbjct: 282 ATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAEL--------DQVVGRDRLPCMG 333
Query: 318 --------NHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAY 368
+ E +R P I + + GY IPK ++V ++ +S +H+P
Sbjct: 334 DQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLK 393
Query: 369 FPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+P+PE F P+R+ D + IN + +++G R C+G +L++ Q+
Sbjct: 394 WPNPENFDPARF-LDKDGL-INKDLTSRVMIFSVGKRRCIGEELSKMQL 440
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP
LM2, cytochro monooxygenase; HET: HEM; 1.60A
{Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A*
2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A*
3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Length = 476
Score = 114 bits (289), Expect = 3e-28
Identities = 84/458 (18%), Positives = 164/458 (35%), Gaps = 98/458 (21%)
Query: 25 PTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQELGPIYKEKIGPVEAYFLNDTADVRKV 84
P P P+ G L+ + K L R + ++ G ++ +G L T +R+
Sbjct: 13 PGPSPLPVLGNLLQM----DRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 68
Query: 85 -------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRK--IMNKYLLKN 135
F+ G G+ F +G W R+ + +++
Sbjct: 69 LVDQAEAFSGRGKIA----------VVDPIFQGYGVIFANGERWRALRRFSLAT---MRD 115
Query: 136 YSAGPQ------QELTKELFKAFEHDIVESTKANNKPI------------IIAHMLGTPF 177
+ G + QE + L + K+ + II ++ F
Sbjct: 116 FGMGKRSVEERIQEEARCLVEELR-------KSKGALLDNTLLFHSITSNIICSIV---F 165
Query: 178 ISHYKELSKEIHDLSQVVHKIFE-HSAALSMLPINLSIKLK--LSAWTKFVESVHQSLAL 234
+ L + + F S+ S + S LK + ++ +
Sbjct: 166 GKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTF 225
Query: 235 ASE--------------------LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFIL 274
+ L +ME D S +++ V+
Sbjct: 226 IGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSSE-------FHHQNLILTVLSLFF 278
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKN---------NDCLNNEIINHVIREGL 325
A +TT+ + ++ F L+ ++P V +++ +E+++ +D + VI E
Sbjct: 279 AGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQ 338
Query: 326 RMYPIAPF-ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDA 384
R+ + PF + + KD + RGY+IPK + V + S+ H+P YF +P F P + DA
Sbjct: 339 RLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHF-LDA 397
Query: 385 NKKYINVVEPYASLPYAMGARSCVGRKLAQTQMCLTIA 422
N +P+++G R C+G +A+T++ L
Sbjct: 398 NGALKR---NEGFMPFSLGKRICLGEGIARTELFLFFT 432
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein,
oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB:
3nc5_A* 3nc6_A* 3nc7_A*
Length = 441
Score = 84.3 bits (209), Expect = 6e-18
Identities = 66/383 (17%), Positives = 126/383 (32%), Gaps = 74/383 (19%)
Query: 61 PIYKE--KIGPV------EAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRG 112
+ + + PV ++YF++ DVR + + L + E +
Sbjct: 57 AYFSQLREEDPVHYEESIDSYFISRYHDVRYILQHPDIFTTKSLVERAEPVMR----GPV 112
Query: 113 LYFMDGPEWMKYRKIMNKYLLKNYSA---------GPQ-QELTKELFKAFEH----DIVE 158
L M G E R+I+ + + P ++ + L + D+V
Sbjct: 113 LAQMHGKEHSAKRRIVVR-------SFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVN 165
Query: 159 STKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLK 217
+ + MLG K ++I + V SI
Sbjct: 166 DF-GKTFAVCVTMDMLGLD-----KRDHEKISEWHSGVADFIT------------SISQS 207
Query: 218 LSAWTKFVESVHQSLALASELLHKM--EPFNGDGLSSKLKEVEN----VSPESIRRMVID 271
A + Q ++ + P G L S L E +S + I +++
Sbjct: 208 PEARAHSLWCSEQLSQYLMPVIKERRVNP--GSDLISILCTSEYEGMALSDKDILALIL- 264
Query: 272 FILAAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPI 330
+L A + + + Y L +P +Q+ ++ + ++ I E LR P
Sbjct: 265 NVLLAATEPADKTLALMIYHLLNNP---EQM-NDVLADR-----SLVPRAIAETLRYKPP 315
Query: 331 APFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYIN 390
I R + +D + G I K ++V + +++ +P F P+ F R+
Sbjct: 316 VQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIH---REDLGIKSA 372
Query: 391 VVEPYASLPYAMGARSCVGRKLA 413
L + G +CVG A
Sbjct: 373 FSGAARHLAFGSGIHNCVGTAFA 395
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent,
mono-oxygenases, oxidoreductase; HET: HEM; 2.00A
{Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Length = 417
Score = 80.1 bits (198), Expect = 2e-16
Identities = 48/286 (16%), Positives = 87/286 (30%), Gaps = 60/286 (20%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAFEH----DIVESTK 161
MD PE YRK ++K L +E+ L +F D
Sbjct: 103 KMDPPEHTPYRKALDKGL------NLAKIRKVEDKVREVASSLIDSFAARGECDFAAEY- 155
Query: 162 ANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSA 220
A P+ + + P + E++ +
Sbjct: 156 AELFPVHVFMALADLPLEDI---------------PVLSEYARQM----TRPEGNTPEEM 196
Query: 221 WTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFIL 274
T + A ++ GD L + + E ++ + + ++ +L
Sbjct: 197 ATDLEAGNNGFYAYVDPIIRARVGGD--GDDLITLMVNSEINGERIAHDKAQGLIS-LLL 253
Query: 275 AAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
G DT + L RHP + +L + + E R +P+
Sbjct: 254 LGGLDTVVNFLSFFMIHLARHPELVAELRSDP---------LKLMRGAEEMFRRFPVVSE 304
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
R + KD E +G + +G ++LL + A P P + SR
Sbjct: 305 -ARMVAKDQEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSR 349
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein
complex, cytochrome P450 fold, carrier protein, 4-helix
bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus
subtilis} PDB: 3ejd_B* 3eje_B*
Length = 404
Score = 79.2 bits (196), Expect = 3e-16
Identities = 70/378 (18%), Positives = 142/378 (37%), Gaps = 63/378 (16%)
Query: 57 QELGPIYKEKIGPVEAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGC-DRGLYF 115
+ + PIYK +++ + + + LP+ KY+ L ++ + F
Sbjct: 23 RAVHPIYKGSFLKYPGWYVTGYEETAAILKDARFKVRTPLPESSTKYQDLSHVQNQMMLF 82
Query: 116 MDGPEWMKYRKIMNKYLLKNYSAG--PQ-QELTKELFKAFEH----DIVESTKANNKPI- 167
+ P+ + R + + + P E L + +++ A
Sbjct: 83 QNQPDHRRLRTLASGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDF-AFPLASF 141
Query: 168 IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVES 227
+IA+++G P E +++ + + + + + + + L T+
Sbjct: 142 VIANIIGVPE-----EDREQLKEWAASLIQTIDFTRSRKAL-------------TEGNIM 183
Query: 228 VHQSLALASELL--HKMEPFNGDGLSSKLKEVEN---VSPESIRRMVIDFILAAG-DTTA 281
Q++A EL+ K P + S L + ++ E I + AG +TT
Sbjct: 184 AVQAMAYFKELIQKRKRHP--QQDMISMLLKGREKDKLTEEEAASTCI-LLAIAGHETTV 240
Query: 282 --ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMP 339
IS L +HP +QL +L++N ++I + E LR R
Sbjct: 241 NLISN--SVLCLLQHP---EQL-LKLRENP-----DLIGTAVEECLRYESPTQMTARVAS 289
Query: 340 KDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLP 399
+D++I G I +G V L + +++ +P+ F +P+ F +R P L
Sbjct: 290 EDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITR-------------SPNPHLS 336
Query: 400 YAMGARSCVGRKLAQTQM 417
+ G C+G LA+ +
Sbjct: 337 FGHGHHVCLGSSLARLEA 354
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron,
metal-binding, oxidoreductase, substrate-soaking,
cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB:
1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A*
2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A*
1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Length = 415
Score = 78.9 bits (195), Expect = 3e-16
Identities = 49/286 (17%), Positives = 85/286 (29%), Gaps = 66/286 (23%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAFEH----DIVESTK 161
MD PE ++R + N+ + G QEL L ++ + E
Sbjct: 103 SMDPPEQRQFRALANQVV------GMPVVDKLENRIQELACSLIESLRPQGQCNFTEDY- 155
Query: 162 ANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSA 220
A PI I + G P + + + +
Sbjct: 156 AEPFPIRIFMLLAGLPEEDI---------------PHLKYLTDQM----------TRPDG 190
Query: 221 WTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFIL 274
F E+ ++ + +P G S + + ++ + +RM +L
Sbjct: 191 SMTFAEAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQVNGRPITSDEAKRMCG-LLL 247
Query: 275 AAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
G DT + L + P + +L + E I E LR + +
Sbjct: 248 VGGLDTVVNFLSFSMEFLAKSPEHRQELIERP---------ERIPAACEELLRRFSLVAD 298
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
R + D E G + KG +LL S + P SR
Sbjct: 299 -GRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSR 343
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans} PDB: 3lxi_A*
Length = 421
Score = 78.9 bits (195), Expect = 4e-16
Identities = 42/286 (14%), Positives = 87/286 (30%), Gaps = 60/286 (20%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAFEH----DIVESTK 161
+D PE YRK ++K L + + E+ + F +
Sbjct: 104 KLDPPEHTPYRKAIDKGL------NLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEF- 156
Query: 162 ANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSA 220
+ P+ + + G P K+ + + S
Sbjct: 157 STVFPVRVFLALAGLPVEDA---------------TKLGLLANEM----TRPSGNTPEEQ 197
Query: 221 WTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFIL 274
+ + ++ + G L +++ VE + + +V +L
Sbjct: 198 GRSLEAANKGFFEYVAPIIAARRGGS--GTDLITRILNVEIDGKPMPDDRALGLVS-LLL 254
Query: 275 AAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
G DT ++ L RHP ++ +E + + E R + +
Sbjct: 255 LGGLDTVVNFLGFMMIYLSRHPETVAEMRREP---------LKLQRGVEELFRRFAVVSD 305
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
R++ D+E G ++ +G L+LL + + P SR
Sbjct: 306 -ARYVVSDMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSR 350
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM
EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A*
3be0_A*
Length = 398
Score = 77.7 bits (192), Expect = 9e-16
Identities = 51/285 (17%), Positives = 94/285 (32%), Gaps = 64/285 (22%)
Query: 115 FMDGPEWMKYRKIMNKYL-------LKNYSAGPQ-QELTKELFKAFEH----DIVESTKA 162
D P KYR+++ K Q ++ T +L A D A
Sbjct: 86 GQDDPVHKKYRQLVAKPFSPEATDLFT-----EQLRQSTNDLIDARIELGEGDAATWL-A 139
Query: 163 NNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAW 221
N P + A +LG P A+ +
Sbjct: 140 NEIPARLTAILLGLPPEDG---------------DTYRRWVWAI----------THVENP 174
Query: 222 TKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILA 275
+ E + +A A L+ + P G+ + S++ + ++S + + +L
Sbjct: 175 EEGAEIFAELVAHARTLIAERRTNP--GNDIMSRVIMSKIDGESLSEDDLIGFFT-ILLL 231
Query: 276 AG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFI 334
G D TA +F+ L + + L + E+I + + E LR Y A
Sbjct: 232 GGIDNTARFLSSVFWRLAWDI---ELR-RRLIAHP-----ELIPNAVDELLRFYGPAMV- 281
Query: 335 TRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
R + ++V + + G +L +S + + F SP+ R
Sbjct: 282 GRLVTQEVTVGDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIER 326
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12;
1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Length = 418
Score = 77.3 bits (191), Expect = 1e-15
Identities = 60/346 (17%), Positives = 120/346 (34%), Gaps = 58/346 (16%)
Query: 58 ELGPIYKEKIGPVEAYFLNDTADVRKVFA--------LEGTYPKHILPQCWEKYRKLYGC 109
GP+ + +D V + T + L + +
Sbjct: 40 RGGPLAL---PEANLAVFSSFSDCDDVLRHPSSCSDRTKSTIFQRQLAAETQPRPQG--- 93
Query: 110 DRGLYFMDGPEWMKYRKIMNKYLLKNYSAG--PQ-QELTKELFKAFEH---DIVESTKAN 163
F+D P+ + R +++K P+ L +L A + +++++ A
Sbjct: 94 PASFLFLDPPDHTRLRGLVSKAFAPRVIKRLEPEITALVDQLLDAVDGPEFNLIDNL-AY 152
Query: 164 NKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWT 222
P+ +I +LG P E + S ++ + P +
Sbjct: 153 PLPVAVICRLLGVP-----IEDEPKFSRASALLAAALD--------PFLALTGETSDLFD 199
Query: 223 KFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFILAA 276
+ +++ L+ + P G+ L S L VE ++ + I +L A
Sbjct: 200 EQMKAGMWLRDYLRALIDERRRTP--GEDLMSGLVAVEESGDQLTEDEIIATCN-LLLIA 256
Query: 277 G-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
G +TT I+ + R P L + + VI E +R P
Sbjct: 257 GHETTVNLIANAA--LAMLRTPGQWAALAADG---------SRASAVIEETMRYDPPVQL 305
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
++R+ D+ I + +PKG +LL + ++ +P +P++F P R
Sbjct: 306 VSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR 351
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding,
oxidoreductase, omega-hydroxylation, iron, heme, fatty
acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium
tuberculosis} PDB: 2wm4_A*
Length = 435
Score = 76.2 bits (188), Expect = 3e-15
Identities = 55/288 (19%), Positives = 102/288 (35%), Gaps = 59/288 (20%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAF-------EHDIVE 158
+D P + R I+++ P+ ++ L + + D+V
Sbjct: 119 VLDDPRHQRLRSIVSRAF------TPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVS 172
Query: 159 STKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLK 217
A P+ II M+G P + I + V+ + A
Sbjct: 173 EL-AGPLPLQIICDMMGIPK-----ADHQRIFHWTNVILGFGDPDLATD----------- 215
Query: 218 LSAWTKFVESVHQSLALASELLH--KMEPFNGDGLSSKLKEVE----NVSPESIRRMVID 271
+ +F++ A A+ L ++ D L+S L E E +S I I
Sbjct: 216 ---FDEFMQVSADIGAYATALAEDRRVNH--HDDLTSSLVEAEVDGERLSSREIASFFIL 270
Query: 272 FILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIA 331
++A +TT + L R+P +Q + D L + E +R
Sbjct: 271 LVVAGNETTRNAITHGVLALSRYP---EQR-DRWWSDFDGL----APTAVEEIVRWASPV 322
Query: 332 PFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
++ R + +D+E+RG + G V L S++ + + F P F +R
Sbjct: 323 VYMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLAR 370
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase,
metal-binding, AN biosynthesis, TIE-ROD mechanism of
action; HET: HEM; 1.59A {Saccharopolyspora erythraea}
PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Length = 411
Score = 75.8 bits (187), Expect = 4e-15
Identities = 68/351 (19%), Positives = 125/351 (35%), Gaps = 74/351 (21%)
Query: 54 KRHQELGPIYKEKIGPVEAYFLNDTADVRKVFALEGTY---PKHILPQCWEKYRKLYGCD 110
+E P+++++ G + + ADV+ V T+ P ++
Sbjct: 35 GTMREKQPVWQDRYG---VWHVFRHADVQTVLRDTATFSSDPTRVIEG-------ASPTP 84
Query: 111 RGLYFMDGPEWMKYRKIMNKYLLKNYSA---------GPQ-QELTKELFKAF--EHDIVE 158
++ +D PE RK+++ A P+ +++T+ L D+V+
Sbjct: 85 GMIHEIDPPEHRALRKVVSS-------AFTPRTISDLEPRIRDVTRSLLADAGESFDLVD 137
Query: 159 STKANNKPII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLK 217
A P+ +A +LG P + H + + S A ++ I +
Sbjct: 138 VL-AFPLPVTIVAELLGLPPMDH---------------EQFGDWSGA--LVDIQMDDPTD 179
Query: 218 LSAWTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVID 271
+ + + ++ A + +P GD L S+L E + E
Sbjct: 180 PALAERIADVLNPLTAYLKARCAERRADP--GDDLISRLVLAEVDGRALDDEEAANFST- 236
Query: 272 FILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMY 328
+L AG TT + I L HP ++ I ++ E LR
Sbjct: 237 ALLLAGHITTTVLLG--NIVRTLDEHP---AHW-DAAAEDP-----GRIPAIVEEVLRYR 285
Query: 329 PIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
P P + R K E+ G IP +V V S++ + P++F PSR
Sbjct: 286 PPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSR 336
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein,
vancomycin biosynthes carrier protein, oxidoreductase;
HET: HEM; 2.10A {Amycolatopsis balhimycina}
Length = 415
Score = 75.4 bits (186), Expect = 5e-15
Identities = 57/323 (17%), Positives = 108/323 (33%), Gaps = 68/323 (21%)
Query: 111 RGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAF----EHDIV 157
R + + + K RK++ L + ++ D
Sbjct: 104 RMMVVSEHEQHRKLRKLVGPLL------SRAAARKLAERVRIEVGDVLGRVLDGEVCDAA 157
Query: 158 ESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKL 216
+ P ++ +LG P + DL+ A
Sbjct: 158 TAI-GPRIPAAVVCEILGVPAEDEDM-----LIDLTN---------HAFGGEDELFDGMT 202
Query: 217 KLSAWTKFVESVHQSLALASELLH--KMEPFNGDGLSSKLKEVENVSPESIRRMVIDFIL 274
A T+ L EL+ + EP GD L S L ++++ + + + ++
Sbjct: 203 PRQAHTEI-------LVYFDELITARRKEP--GDDLVSTLVTDDDLTIDDVLLNCDNVLI 253
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFI 334
+TT + + L P L L+ + ++ V+ E LR A +
Sbjct: 254 GGNETTRHAITGAVHALATVP---GLL-TALRDGS-----ADVDTVVEEVLRWTSPAMHV 304
Query: 335 TRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEP 394
R DV I G +P G+ V+ + +++ +PA F P+ F P R N+
Sbjct: 305 LRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPG---RKPNR-------- 353
Query: 395 YASLPYAMGARSCVGRKLAQTQM 417
+ + G C+G LA+ ++
Sbjct: 354 --HITFGHGMHHCLGSALARIEL 374
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta
binding protein; HET: HEM; 2.47A {Micromonospora
echinospora}
Length = 397
Score = 74.9 bits (185), Expect = 6e-15
Identities = 70/380 (18%), Positives = 139/380 (36%), Gaps = 64/380 (16%)
Query: 55 RHQELGPIYKEKIGPVEAYFLNDTADVRKVFA---LEGTYPKHILPQCWEKYRKLYGCDR 111
P+++ G ++++ ADVR V T +
Sbjct: 21 WLLRHDPVHR---GAHRVWYVSRFADVRAVLGDERFARTGIRRFWTDLVGPGLLAEIVGD 77
Query: 112 GLYFMDGPEWMKYRKIMNKYLLKNYSAG--PQ-QELTKELFKAFEH----DIVESTKANN 164
+ F D P+ + R ++ + P +L + D+V+ A
Sbjct: 78 IILFQDEPDHGRLRGVVGPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDEL-AYP 136
Query: 165 KPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTK 223
+ + +LG P + S+ V + + A+ + + +A +
Sbjct: 137 LALRAVLGLLGLPA-----ADWGAVGRWSRDVGRTLDRGASAEDM------RRGHAAIAE 185
Query: 224 FVESVHQSLALASELLHKMEPFNGDGLSSKLKEVEN---VSPESIRRMVIDFILAAG-DT 279
F + V ++LA + E G+ L + + + + +S I V+ + G +T
Sbjct: 186 FADYVERALAR-----RRREG--GEDLLALMLDAHDRGLMSRNEIVSTVV-TFIFTGHET 237
Query: 280 TA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRF 337
A + L HP DQL L++ +++ + E LR P TR
Sbjct: 238 VASQVGNAV--LSLLAHP---DQL-DLLRRRP-----DLLAQAVEECLRYDPSVQSNTRQ 286
Query: 338 MPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYAS 397
+ DVE+RG + + +V++ +++ +P + P+ F R +P S
Sbjct: 287 LDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIER-------------DPVPS 333
Query: 398 LPYAMGARSCVGRKLAQTQM 417
+ + G R C+G LA+TQ+
Sbjct: 334 MSFGAGMRYCLGSYLARTQL 353
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX,
bioremediation, electron transport; HET: HEM; 1.49A
{Rhodococcus} PDB: 2wiv_A*
Length = 394
Score = 74.6 bits (184), Expect = 9e-15
Identities = 55/325 (16%), Positives = 104/325 (32%), Gaps = 70/325 (21%)
Query: 110 DRGLYFMDGPEWMKYRKIMNKYL-------LKNYSAGPQ-QELTKELFKAF----EHDIV 157
D P R+ NK+ +EL +L +
Sbjct: 76 SDTALGSDPPHHTVLRRQTNKWFTPKLVDGWV-----RTTRELVGDLLDGVEAGQVIEAR 130
Query: 158 ESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKL 216
A +A +L P ++ + + + + A +
Sbjct: 131 RDL-AVVPTHVTMARVLQLP-----EDDADAVMEAMFEAMLMQSAEPADGDVD------- 177
Query: 217 KLSAWTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVEN---VSPESIRRMVID 271
+ + A +E+L ++ P GDGL+ L + ++ ++
Sbjct: 178 ------RAAVAFGYLSARVAEMLEDKRVNP--GDGLADSLLDAARAGEITESEAIATIL- 228
Query: 272 FILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMY 328
A G I+ L R P + + + +I E +RM
Sbjct: 229 VFYAVGHMAIGYLIA--SGIELFARRP---EVF-TAFRNDE-----SARAAIINEMVRMD 277
Query: 329 PIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKY 388
P RF +DVEI G LI GS + + +++ +P F P+ F +R A++
Sbjct: 278 PPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTR-PPAASR-- 334
Query: 389 INVVEPYASLPYAMGARSCVGRKLA 413
+L + +G SC G+ ++
Sbjct: 335 --------NLSFGLGPHSCAGQIIS 351
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme,
oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB:
2z3u_A* 3a1l_A*
Length = 425
Score = 74.2 bits (183), Expect = 1e-14
Identities = 66/361 (18%), Positives = 125/361 (34%), Gaps = 75/361 (20%)
Query: 55 RHQELGPIYKEKIGP--VEAYFLNDTADVRKVFA---------LEGTYPKHILPQCWEKY 103
R++E P+++ GP + Y++ DV +V + + ++
Sbjct: 28 RYREAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNRRLGRNARVASGDTDTAPVPIPTEH 87
Query: 104 RKLYGCDRG-LYFMDGPEWMKYRKIMNKYLLKNYSA---------GPQ-QELTKELFKAF 152
R L L F+D P + R ++ P+ EL L
Sbjct: 88 RALRTVVENWLVFLDPPHHTELRSLLTT-------EFSPSIVTGLRPRIAELASALLDRL 140
Query: 153 EH----DIVESTKANNKPII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSM 207
D+VE A PI+ I+ +LG P E + + +
Sbjct: 141 RAQRRPDLVEGF-AAPLPILVISALLGIPE-----EDHTWLRANAVA------------L 182
Query: 208 LPINLSIKLKLSAWTKFVESVHQSLALASELLHK--MEPFNGDGLSSKLKEVEN----VS 261
+ + + + + + + + + D L + L + +S
Sbjct: 183 QEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGGDD--RDDLLTLLVRARDTGSPLS 240
Query: 262 PESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIIN 318
+ I + +L AG +TT ++ L H D L EL+ E
Sbjct: 241 VDGIVGTCV-HLLTAGHETTTNFLA--KAVLTLRAHR---DVL-DELRTTP-----ESTP 288
Query: 319 HVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPS 378
+ E +R P +TR+ +D+ + + IP+GS V+ + S++ +PA FP P+
Sbjct: 289 AAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVH 348
Query: 379 R 379
R
Sbjct: 349 R 349
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase,
oxidoreductase; HET: HEM; 2.00A {Sphingopyxis
macrogoltabida}
Length = 426
Score = 74.2 bits (183), Expect = 1e-14
Identities = 69/365 (18%), Positives = 118/365 (32%), Gaps = 75/365 (20%)
Query: 79 ADVRKV------FALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYL 132
D+ V F+ + Y I+ +K MD P + RK ++ +
Sbjct: 71 NDIMHVDTNHDIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMDRPRHDEQRKAVSPIV 130
Query: 133 LKNYSAGPQ---------QELTKELFKAF----EHDIVESTKANNKPI-IIAHMLGTPFI 178
P +E + E D V+ + ++A + PF
Sbjct: 131 ------APANLAALEGTIRERVSKTLDGLPVGEEFDWVDRV-SIEITTQMLATLFDFPF- 182
Query: 179 SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL 238
E +++ S V +W + + + A L
Sbjct: 183 ----EERRKLTRWSDVTTAAPGGGVV--------------ESWDQRKTELLECAAYFQVL 224
Query: 239 LH---KMEPFNGDGLSSKLKEVE---NVSPESIRRMVIDFILAAGDTTAISTQWIFYLLG 292
+ +P G+ L S L N++PE V+ I+ DTT S L
Sbjct: 225 WNERVNKDP--GNDLISMLAHSPATRNMTPEEYLGNVLLLIVGGNDTTRNSMTGGVLALH 282
Query: 293 RHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKG 352
++P DQ K N L + ++ E +R + R D E+ G I KG
Sbjct: 283 KNP---DQF--AKLKANPAL----VETMVPEIIRWQTPLAHMRRTAIADSELGGKTIRKG 333
Query: 353 SLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKL 412
V++ +S + + PE+F R + L + G CVG +L
Sbjct: 334 DKVVMWYYSGNRDDEVIDRPEEFIIDR--PRPRQ----------HLSFGFGIHRCVGNRL 381
Query: 413 AQTQM 417
A+ Q+
Sbjct: 382 AEMQL 386
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase,
oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus}
PDB: 2rfc_A*
Length = 343
Score = 73.4 bits (181), Expect = 1e-14
Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 64/281 (22%)
Query: 115 FMDGPEWMKYRKIMNKY-------LLKNYSAGPQ-QELTKELFKAFEH-DIVESTKANNK 165
MD PE ++R I Y K +E + +L K ++ DI+ A
Sbjct: 49 TMDNPEHKEFRDISAPYFLPSKINDYK-----DFIEETSNDLIKNIDNKDIISEY-AVRL 102
Query: 166 PII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKF 224
P+ I+ +LG P S + + F
Sbjct: 103 PVNIISKILGIPDSDM---------------PLFKLWSDYI----------IGNKRDENF 137
Query: 225 VESVHQSLALASELLHKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DT 279
++ ++ E+ G+ + L ++ + + ++ ++ G +T
Sbjct: 138 NYVNNRMVSRLLEIFK--SD--SHGIINVLAGSSLKNRKLTMDEKIKYIM-LLIIGGNET 192
Query: 280 TAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFM 338
T + ++ +P D + + KN + + E LR Y F+ RF
Sbjct: 193 TTNLIGNMIRVIDENP---DII-DDALKN--------RSGFVEETLRYYSPIQFLPHRFA 240
Query: 339 PKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+D I I KG V++ + S++ + +F P+ F+ R
Sbjct: 241 AEDSYINNKKIKKGDQVIVYLGSANRDETFFDEPDLFKIGR 281
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A
{Novosphingobium aromaticivorans} PDB: 3ofu_A*
Length = 396
Score = 73.0 bits (180), Expect = 2e-14
Identities = 55/292 (18%), Positives = 91/292 (31%), Gaps = 67/292 (22%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAF----EHDIVESTK 161
DG E +R + K L + Q + ++L ++ D V
Sbjct: 88 QQDGAEHKAFRTPVMKGL------ASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDF- 140
Query: 162 ANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSA 220
A P+ I ++ P ++ + L +
Sbjct: 141 AEILPLNIFLTLIDVPLEDR---------------PRLRQLGVQL----------TRPDG 175
Query: 221 WTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFIL 274
+ + + +P GD L S++ + + RRM +L
Sbjct: 176 SMTVEQLKQAADDYLWPFIEKRMAQP--GDDLFSRILSEPVGGRPWTVDEARRMCR-NLL 232
Query: 275 AAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
G DT A + L RHP Q L + ++I E +R YP
Sbjct: 233 FGGLDTVAAMIGMVALHLARHPEDQRLLRERP---------DLIPAAADELMRRYPTVAV 283
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDAN 385
+R DV+ G I KG LV L + +PA F +PE+ + R
Sbjct: 284 -SRNAVADVDADGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDR-GLAPI 333
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A
{Pseudomonas SP} SCOP: a.104.1.1
Length = 428
Score = 73.1 bits (180), Expect = 3e-14
Identities = 64/324 (19%), Positives = 116/324 (35%), Gaps = 61/324 (18%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAF-----EHDIVEST 160
MD P YR + + P + + + + E D +
Sbjct: 104 SMDPPTHTAYRGLTLNWF------QPASIRKLEENIRRIAQASVQRLLDFDGECDFMTDC 157
Query: 161 KANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLS 219
A P+ ++ LG P + + L+Q + E P + +
Sbjct: 158 -ALYYPLHVVMTALGVPE-----DDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADE---- 207
Query: 220 AWTKFVESVHQSLALASELLH--KMEPFNGDGLSSKLKEVEN----VSPESIRRMVIDFI 273
A +F E++ + + P D + S L + + + I +
Sbjct: 208 AARRFHETIATFYDYFNGFTVDRRSCP--KDDVMSLLANSKLDGNYIDDKYINAYYVAIA 265
Query: 274 LAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF 333
A DTT+ S+ L R+P +QL L K++ L I ++ E +R
Sbjct: 266 TAGHDTTSSSSGGAIIGLSRNP---EQL--ALAKSDPAL----IPRLVDEAVRWTAPVKS 316
Query: 334 ITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVE 393
R D E+RG I +G ++LS S++ + F +P++F + R N+
Sbjct: 317 FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDIT---RFPNR------- 366
Query: 394 PYASLPYAMGARSCVGRKLAQTQM 417
L + GA C+G+ LA+ +M
Sbjct: 367 ---HLGFGWGAHMCLGQHLAKLEM 387
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase,
metal-binding, oxidoreductase, hypothetical protein;
HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB:
2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Length = 414
Score = 71.9 bits (177), Expect = 7e-14
Identities = 67/391 (17%), Positives = 120/391 (30%), Gaps = 86/391 (21%)
Query: 54 KRHQELGPIYKEKIGPVE---AYFLNDTADVRKVFALEGTY--PKHILPQCWEKYRKLYG 108
+ ++ P++ Y L+ ADV T+ + + E
Sbjct: 32 RALRDHDPVHHVVPPQRPEYDYYVLSRHADVWSAARDHQTFSSAQGLTVNYGELEMIGLH 91
Query: 109 CDRGLYFMDGPEWMKYRKIMNKYLLKNYSA---------GPQ-QELTKELFKAFEH---- 154
+ D P ++RK++++ P ++ E +
Sbjct: 92 DTPPMVMQDPPVHTEFRKLVSR-------GFTPRQVETVEPTVRKFVVERLEKLRANGGG 144
Query: 155 DIVESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLS 213
DIV P ++AH LG P +E + +Q A ++ ++ +
Sbjct: 145 DIVTEL-FKPLPSMVVAHYLGVP-----EEDWTQFDGWTQ---------AIVAANAVDGA 189
Query: 214 IKLKLSAWTKFVESVHQSLA---------LASELLHKMEPFNGDGLSSKLKEVENVSPES 264
L A + + S L+ +GD + ++
Sbjct: 190 TTGALDAVGSMMAYFTGLIERRRTEPADDAISHLVAAGVGADGDTAG----TLSILA--- 242
Query: 265 IRRMVIDFILAAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIRE 323
++ G DT LL R P DQ + L + E I + E
Sbjct: 243 ---FTF-TMVTGGNDTVTGMLGGSMPLLHRRP---DQR-RLLLDDP-----EGIPDAVEE 289
Query: 324 GLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYF-PSPEQFQPSRWKR 382
LR+ + R +DV I IP G VLL S++ + + P + +R
Sbjct: 290 LLRLTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTR--- 346
Query: 383 DANKKYINVVEPYASLPYAMGARSCVGRKLA 413
P L ++ GA C+G A
Sbjct: 347 ----------CPRNILTFSHGAHHCLGAAAA 367
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E
oxidoreductase; HET: HEM; 2.20A {Novosphingobium
aromaticivorans}
Length = 450
Score = 71.2 bits (175), Expect = 1e-13
Identities = 64/327 (19%), Positives = 119/327 (36%), Gaps = 59/327 (18%)
Query: 111 RGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAFEH-----DI 156
L MD P+ K R++ + P+ +++ E D
Sbjct: 122 ESLVQMDAPKHPKLRRLTQDWF------MPKNLARLDGEIRKIANEAIDRMLGAGEEGDF 175
Query: 157 VESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIK 215
+ A P+ ++ +LG P E ++ L+Q + + S L +
Sbjct: 176 MALV-AAPYPLHVVMQILGVPP-----EDEPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQ 229
Query: 216 LKLSAWTKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEVE----NVSPESIRRMVID 271
+ E LA+E + P D +++ + +S I
Sbjct: 230 ISQIVAGAVAEFERYFAGLAAE--RRRNP--TDDVATVIANAVVDGEPMSDRDTAGYYI- 284
Query: 272 FILAAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPI 330
+AG DTT+ S+ L R P D ++ + + ++ ++ E +R
Sbjct: 285 ITASAGHDTTSASSAGAALALARDP---DLF-ARVKADRN-----LLPGIVEEAIRWTTP 335
Query: 331 APFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYIN 390
R D E+ G I G ++L+ +++H+PA FP P +F P+ R AN+
Sbjct: 336 VQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPT---RPANRH--- 389
Query: 391 VVEPYASLPYAMGARSCVGRKLAQTQM 417
L + G+ C+G LA+ +M
Sbjct: 390 -------LAFGAGSHQCLGLHLARLEM 409
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM;
1.60A {Mycobacterium tuberculosis}
Length = 398
Score = 71.1 bits (175), Expect = 1e-13
Identities = 54/290 (18%), Positives = 89/290 (30%), Gaps = 58/290 (20%)
Query: 111 RGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAFEH----DIV 157
+ MD P + RK++N + L L A D V
Sbjct: 73 PMMIDMDDPAHLLRRKLVNAGF------TRKRVKDKEASIAALCDTLIDAVCERGECDFV 126
Query: 158 ESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKL 216
A P+ +I MLG E S + +
Sbjct: 127 RDL-AAPLPMAVIGDMLGVR-----PEQRDMFLRWSDDLVTFLSSHVSQEDFQ------- 173
Query: 217 KLSAWTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVE----NVSPESIRRMVI 270
+++ + + +P D L S L E +S + + +
Sbjct: 174 ------ITMDAFAAYNDFTRATIAARRADP--TDDLVSVLVSSEVDGERLSDDELVMETL 225
Query: 271 DFILAAG-DTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYP 329
IL G +TT + L R+ DQ LQ++ ++ I E LR
Sbjct: 226 -LILIGGDETTRHTLSGGTEQLLRNR---DQW-DLLQRDP-----SLLPGAIEEMLRWTA 275
Query: 330 IAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+ R + D E G + G ++L S++ + A F PE+F R
Sbjct: 276 PVKNMCRVLTADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQR 325
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A
{Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Length = 416
Score = 70.7 bits (174), Expect = 2e-13
Identities = 60/362 (16%), Positives = 126/362 (34%), Gaps = 72/362 (19%)
Query: 79 ADVRKVFA---LEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKN 135
A+ ++ L + + + L +DG + + R +
Sbjct: 63 AEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGADHRRLRGLATHP---- 118
Query: 136 YSAG------PQ-QELTKELFKAFEH---DIVESTKANNKPI-IIAHMLGTPFISHYKEL 184
++ P + ++L D V+ + P ++ +LG P +
Sbjct: 119 FTPRRITAVQPFVRSTVEQLIDKLPQGDFDFVQHF-PHPLPALVMCQLLGFPLEDY---- 173
Query: 185 SKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHK--M 242
+ S ++ L++ K + + + + K +
Sbjct: 174 -----------DTVGRLSIETNLG---LALSNDQDILVKVEQGLGRMFDYLVAAIEKRKV 219
Query: 243 EPFNGDGLSSKLKEVEN---VSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPS 296
EP GD L+S + + + +R +V +L AG +TT ++ ++ +HP
Sbjct: 220 EP--GDDLTSDIVRAFHDGVLDDYELRTLVA-TVLVAGYETTNHQLALA-MYDFA-QHP- 273
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF-ITRFMPKDVEIRGYLIPKGSLV 355
DQ ++++N E+ + E LR P P TR +D E+ G IP G+ V
Sbjct: 274 --DQW-MKIKENP-----ELAPQAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPV 325
Query: 356 LLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
+ + +P F ++F + + S+ + G C+G LA+
Sbjct: 326 FMCAHVAHRDPRVFADADRFDITV--KREA----------PSIAFGGGPHFCLGTALARL 373
Query: 416 QM 417
++
Sbjct: 374 EL 375
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; HET: HEM; 1.50A {Sulfolobus
solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A*
1io9_A* 1io8_A*
Length = 368
Score = 70.3 bits (173), Expect = 2e-13
Identities = 57/322 (17%), Positives = 96/322 (29%), Gaps = 67/322 (20%)
Query: 79 ADVRKVFA-------LEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKY 131
++V Y + + K R + D P + R +
Sbjct: 27 RYTKEVLNNFSKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADI 86
Query: 132 LLKNYSAGPQ---------QELTKELFKAFEH---DIVESTKANNKPII-IAHMLGTPFI 178
PQ +E T+ L + + DIV+ A PII I+ +LG P
Sbjct: 87 F------SPQKLQTLETFIRETTRSLLDSIDPREDDIVKKL-AVPLPIIVISKILGLPIE 139
Query: 179 SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL 238
K E S ++ + E + L L +
Sbjct: 140 DK---------------EKFKEWSDLVAFRL---------GKPGEIFELGKKYLELIGYV 175
Query: 239 LHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAG-DTTAISTQWIFYLLGRHPSV 297
+ G + S++ +S +I +L AG +TT R
Sbjct: 176 KDHLNS--GTEVVSRVVNSN-LSDIEKLGYII-LLLIAGNETTTNLISNSVIDFTRFN-- 229
Query: 298 QDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLL 357
Q +E + I E LR P R + V++ I +G V +
Sbjct: 230 LWQRIRE---------ENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRV 280
Query: 358 SVFSSSHNPAYFPSPEQFQPSR 379
+ S++ + F E+F P R
Sbjct: 281 WIASANRDEEVFHDGEKFIPDR 302
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A
{Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A*
4dnz_A*
Length = 412
Score = 70.4 bits (173), Expect = 2e-13
Identities = 62/388 (15%), Positives = 118/388 (30%), Gaps = 89/388 (22%)
Query: 54 KRHQELGPIYKEKIGPVEAYFLNDTADVRKVFA-------LEGTYPKHILPQCWEKYRKL 106
+ +E GP+ + Y + A+V V G + +
Sbjct: 41 ETLREAGPVVY--LDKWNVYGVARYAEVYAVLNDPLTFCSSRGVGLSDFKKEKPWRPP-- 96
Query: 107 YGCDRGLYFMDGPEWMKYRKIMNKYL-------LKNYSAGPQ-QELTKELFKAF-----E 153
+ D P + R +++K L L+
Sbjct: 97 ----SLILEADPPAHTRTRAVLSKVLSPATMKRLR-----DGFAAAADAKIDELLARGGN 147
Query: 154 HDIVESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINL 212
D + A P+ + +G +E + + + +V F L
Sbjct: 148 IDAIADL-AEAYPLSVFPDAMGLK-----QEGRENLLPYAGLVFNAFGPPNELR------ 195
Query: 213 SIKLKLSAWTKFVESVHQSLALASELLHKMEPFNGDGLSSKLKEVE----NVSPESIRRM 268
+E A +E + G ++PE +
Sbjct: 196 ---------QSAIERSAPHQAYVAEQCQRPNL--APGGFGACIHAFSDTGEITPEEAPLL 244
Query: 269 VIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGL 325
V +L+AG DTT I+ Y L R P D+ L+ + + + E +
Sbjct: 245 VR-SLLSAGLDTTVNGIA--AAVYCLARFP---DEF-ARLRADP-----SLARNAFEEAV 292
Query: 326 RMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDAN 385
R R +DVE+ G I +G VL+ + S++ +P + P+++ +R
Sbjct: 293 RFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITR------ 346
Query: 386 KKYINVVEPYASLPYAMGARSCVGRKLA 413
+ + + G CVG+ +A
Sbjct: 347 -------KTSGHVGFGSGVHMCVGQLVA 367
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase,
heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A
{Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A*
1pkf_A*
Length = 419
Score = 68.8 bits (169), Expect = 7e-13
Identities = 72/358 (20%), Positives = 121/358 (33%), Gaps = 74/358 (20%)
Query: 55 RHQELGPIYKEKIGPVEAYFLNDTADVRKVFA--------LEGTYPKHILPQCWEKYRKL 106
R +E PI+ ++ L DV VF E E
Sbjct: 34 RLREATPIFY--WDEGRSWVLTRYHDVSAVFRDERFAVSREEWESSAEYSSAIPELSDMK 91
Query: 107 YGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSA---------GPQ-QELTKELFKAFEH-- 154
GL+ + + + RK++N + + Q +L A
Sbjct: 92 ---KYGLFGLPPEDHARVRKLVNP-------SFTSRAIDLLRAEIQRTVDQLLDARSGQE 141
Query: 155 --DIVESTKANNKPII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPIN 211
D+V A P+ I+ +L P K +A +
Sbjct: 142 EFDVVRDY-AEGIPMRAISALLKVPAECD---------------EKFRRFGSATARALGV 185
Query: 212 LSIKLKLSAWTKFVESVHQSLALASELL--HKMEPFNGDGLSSKLKEVEN----VSPESI 265
+ V SV + LAL +L + P + + + L + E +S + +
Sbjct: 186 GLVPRVDEETKTLVASVTEGLALLHGVLDERRRNP-LENDVLTMLLQAEADGSRLSTKEL 244
Query: 266 RRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIR 322
+V I+AAG DTT I+ + L R P + L + ++ ++ + +
Sbjct: 245 VALVG-AIIAAGTDTTIYLIA--FAVLNLLRSP---EAL-ELVKAEP-----GLMRNALD 292
Query: 323 EGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
E LR I T RF +D+E G I KG +V L + S+ + F P+ F R
Sbjct: 293 EVLRFDNILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRR 350
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR,
atomic resolutio structural genomics/proteomics
initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum}
SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A*
1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A*
1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Length = 404
Score = 68.4 bits (168), Expect = 9e-13
Identities = 61/331 (18%), Positives = 111/331 (33%), Gaps = 74/331 (22%)
Query: 79 ADVRKVFA---LEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKY---- 131
DV V L + P+ ++ MD PE M R ++
Sbjct: 50 KDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAKPTFVDMDPPEHMHQRSMVEPTFTPE 109
Query: 132 ---LLKNYSAGPQ-QELTKELFKAFEH--------DIVESTKANNKPI-IIAHMLGTPFI 178
L+ P Q +L + + D+V+ A P II +LG PF
Sbjct: 110 AVKNLQ-----PYIQRTVDDLLEQMKQKGCANGPVDLVKEF-ALPVPSYIIYTLLGVPFN 163
Query: 179 SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASEL 238
+ + +A + + + + L + L
Sbjct: 164 DL---------------EYLTQQNAIRTNGSSTAR---------EASAANQELLDYLAIL 199
Query: 239 LHK--MEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFY 289
+ + +EP D + SKL + N+ ++ +L AG T I+ +
Sbjct: 200 VEQRLVEP--KDDIISKLCTEQVKPGNIDKSDAVQIAF-LLLVAGNATMVNMIALG-VAT 255
Query: 290 LLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYL 348
L +HP DQL +L+ N + + E R + + R +DV I L
Sbjct: 256 LA-QHP---DQL-AQLKANP-----SLAPQFVEELCRYHTASALAIKRTAKEDVMIGDKL 305
Query: 349 IPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+ ++ S S++ + F +P++F +R
Sbjct: 306 VRANEGIIASNQSANRDEEVFENPDEFNMNR 336
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme,
monooxygenase, macrolide, filipi metal-binding; HET:
HEM; 2.30A {Streptomyces avermitilis}
Length = 408
Score = 68.4 bits (168), Expect = 1e-12
Identities = 63/360 (17%), Positives = 123/360 (34%), Gaps = 74/360 (20%)
Query: 79 ADVRKVFA---LEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYLLKN 135
A+ R + L + P + G L +D P + R+++
Sbjct: 57 AEGRALLVDPRLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDDPVHARQRRMLIPSFGVK 116
Query: 136 YSAG--PQ-QELTKELFKAFEH-----DIVESTKANNKPI-IIAHMLGTPFISHYKELSK 186
P+ Q L L D+V + A P I +LG P+ H
Sbjct: 117 RMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAF-ALPVPSVAICELLGVPYGDH------ 169
Query: 187 EIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELL-HKM-EP 244
+ + + + + + L+ K EP
Sbjct: 170 --DFFEECSRNFVGAATS-----------------AEADAAFGELYTYLHGLVGRKQAEP 210
Query: 245 FNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSV 297
DGL +L + ++ + + + + +L AG +TT I+ L+ +HP
Sbjct: 211 --EDGLLDELIARQLEEGDLDHDEVVMIAL-VLLVAGHETTVNAIALG-ALTLI-QHP-- 263
Query: 298 QDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLL 357
+Q+ L ++ ++ V+ E LR ++ I R +D+E+ G I G VL+
Sbjct: 264 -EQI-DVLLRDP-----GAVSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLV 316
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
S+ + + + +P+ F R + + G C+G+ LA+ ++
Sbjct: 317 SITLMNRDAKAYENPDIFDARR-------------NARHHVGFGHGIHQCLGQNLARAEL 363
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron,
metal-binding, oxidoreductase; HET: HEM; 1.35A
{Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A*
3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Length = 433
Score = 68.1 bits (167), Expect = 1e-12
Identities = 50/292 (17%), Positives = 90/292 (30%), Gaps = 64/292 (21%)
Query: 115 FMDGPEWMKYRKIMNKYLLKNYSAGPQ---------QELTKELFKAF----EHDIVESTK 161
MD P + RKI+++ P+ QE +++ D VE
Sbjct: 118 NMDAPHHTRLRKIISRGF------TPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQV- 170
Query: 162 ANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSA 220
+ P+ IA +LG P E ++ S + ++
Sbjct: 171 SCELPLQAIAGLLGVPQ-----EDRGKLFHWSN---------EMTGNEDPEYAHIDPKAS 216
Query: 221 WTKFVESVHQSLALASELLH--KMEPFNGDGLSSKLKEVE----NVSPESIRRMVIDFIL 274
+ + A ++ P D + ++L + + +S + V+ +
Sbjct: 217 SAEL-------IGYAMKMAEEKAKNP--ADDIVTQLIQADIDGEKLSDDEFGFFVVMLAV 267
Query: 275 AAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFI 334
A +TT S HP DQ + E +R
Sbjct: 268 AGNETTRNSITQGMMAFAEHP---DQW--------ELYKKVRPETAADEIVRWATPVTAF 316
Query: 335 TRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANK 386
R +D E+ G I KG V++ S++ + F P F R+ N
Sbjct: 317 QRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNIL---RNPNP 365
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin,
oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora
erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A*
1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Length = 404
Score = 67.6 bits (166), Expect = 1e-12
Identities = 65/357 (18%), Positives = 126/357 (35%), Gaps = 74/357 (20%)
Query: 55 RHQELGPIYKEKIGPVEAYFLNDTADVRKVFA----------LEGTYPKHILPQCWEKYR 104
+E P+ + +A+ + + + +
Sbjct: 22 ELRETAPVTPVRFLGQDAWLVTGYDEAKAALSDLRLSSDPKKKYPGVEVEFPAYLGFPED 81
Query: 105 KLYGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAG------PQ-QELTKELFKAFEH--- 154
+ D P + RK++++ + P+ +++T EL
Sbjct: 82 VRNYFATNMGTSDPPTHTRLRKLVSQEF----TVRRVEAMRPRVEQITAELLDEVGDSGV 137
Query: 155 -DIVESTKANNKPII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINL 212
DIV+ A+ PI I +LG + E S + + A
Sbjct: 138 VDIVDRF-AHPLPIKVICELLGVDE-----KYRGEFGRWSSEILVMDPERAEQRG----- 186
Query: 213 SIKLKLSAWTKFVESVHQSLALASELLHK--MEPFNGDGLSSKLKEVENV-----SPESI 265
++ + + +L+ + EP GD L S L V++ S + +
Sbjct: 187 -------------QAAREVVNFILDLVERRRTEP--GDDLLSALIRVQDDDDGRLSADEL 231
Query: 266 RRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIR 322
+ + +L AG + + I + LL HP DQL ++++ + + +
Sbjct: 232 TSIAL-VLLLAGFEASVSLIGIG-TYLLL-THP---DQL-ALVRRDP-----SALPNAVE 279
Query: 323 EGLRMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
E LR TRF ++VEI G IP+ S VL++ +++ +P FP P +F +R
Sbjct: 280 EILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTR 336
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase,
cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Length = 381
Score = 66.6 bits (163), Expect = 3e-12
Identities = 22/148 (14%), Positives = 45/148 (30%), Gaps = 27/148 (18%)
Query: 273 ILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYP 329
L AG + TA + + P + + + + E LR++P
Sbjct: 219 ALFAGAEMTANTVVDAV--LAVSAEP---GLA-ERIADDP-----AAAQRTVAEVLRLHP 267
Query: 330 IAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYI 389
R +V + ++I +G V++ V +++ +P F P++ R
Sbjct: 268 ALHLERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDR---------- 317
Query: 390 NVVEPYASLPYAMGARSCVGRKLAQTQM 417
A +L
Sbjct: 318 ---PDADRALSAHRGHPGRLEELVTALA 342
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450
vancomycin, oxidoreductase; HET: HEM; 1.70A
{Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A*
1lgf_A*
Length = 398
Score = 66.1 bits (162), Expect = 4e-12
Identities = 34/177 (19%), Positives = 73/177 (41%), Gaps = 31/177 (17%)
Query: 247 GDGLSSKL--KEVENVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQL 301
G+G+ + + ++ + E +R + ++ AG D + I + RHP +Q+
Sbjct: 206 GEGMIGAVVAEYGDDATDEELRGFCV-QVMLAGDDNISGMIGLGV--LAMLRHP---EQI 259
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLLSVF 360
+ + + + E +R + T R +D+ + G I KG V+ S+
Sbjct: 260 -DAFRGDE-----QSAQRAVDELIRYLTVPYSPTPRIAREDLTLAGQEIKKGDSVICSLP 313
Query: 361 SSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+++ +PA P ++ +R EP + + G C+G LA+ ++
Sbjct: 314 AANRDPALAPDVDRLDVTR-------------EPIPHVAFGHGVHHCLGAALARLEL 357
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2,
anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A
{Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A*
2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Length = 406
Score = 65.7 bits (161), Expect = 6e-12
Identities = 37/178 (20%), Positives = 66/178 (37%), Gaps = 32/178 (17%)
Query: 247 GDGLSSKLKEVEN---VSPESIRRMVIDFILAAGDTTA--ISTQWIFYLLGRHPSVQDQL 301
G+ ++S L ++ + + + G+ +F+LL P +
Sbjct: 211 GEDVTSLLGAAVGRDEITLSEAVGLAV-LLQIGGEAVTNNSGQ--MFHLLLSRP---ELA 264
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPF--ITRFMPKDVEIRGYLIPKGSLVLLSV 359
+ L+ EI I E LR P ++R +DVEI+G I G V +S
Sbjct: 265 -ERLRSEP-----EIRPRAIDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSY 318
Query: 360 FSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+++ +P FP P++ R P + + G C G LA+ +
Sbjct: 319 LAANRDPEVFPDPDRIDFER-------------SPNPHVSFGFGPHYCPGGMLARLES 363
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450
fold, structural genomics, PSI, protein structure
initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis}
SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A*
3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Length = 396
Score = 65.7 bits (161), Expect = 6e-12
Identities = 57/362 (15%), Positives = 108/362 (29%), Gaps = 78/362 (21%)
Query: 79 ADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEWMKYRKIMNKYL------ 132
A +V K + L + M RK + K +
Sbjct: 49 ALCTQVLEDRRFSMKETAAAGAPRLNALTVPPEVVNNMGNIADAGLRKAVMKAITPKAPG 108
Query: 133 LKNYSAGPQ-QELTKELFKAFEH-----DIVESTKANNKPI-IIAHMLGTPFISHYKELS 185
L+ ++ L D+ A+ + +LG P
Sbjct: 109 LE-----QFLRDTANSLLDNLITEGAPADLRNDF-ADPLATALHCKVLGIPQ-------- 154
Query: 186 KEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEPF 245
D S +++ + I W + + + +L
Sbjct: 155 ---ED-----GPKLFRSLSIAFMSSADPIPAAKINWDRDI-------EYMAGILENPNI- 198
Query: 246 NGDGLSSKLKEVEN------VSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPS 296
GL +L + VS E + + AG +T ++T + L+ + P
Sbjct: 199 -TTGLMGELSRLRKDPAYSHVSDELFATIGV-TFFGAGVISTGSFLTTA-LISLI-QRP- 253
Query: 297 VQDQLYQELQKNNDCLNNEIINHVIREGLRMY-PIAPFITRFMPKDVEIRGYLIPKGSLV 355
L + E+I + E LR+ A + R D+++ L+ KG LV
Sbjct: 254 --QLR-NLLHEKP-----ELIPAGVEELLRINLSFADGLPRLATADIQVGDVLVRKGELV 305
Query: 356 LLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQT 415
L+ + ++ +P +FP+P + R + + L + G C G L +
Sbjct: 306 LVLLEGANFDPEHFPNPGSIELDR--PNPT----------SHLAFGRGQHFCPGSALGRR 353
Query: 416 QM 417
Sbjct: 354 HA 355
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding,
monooxygenase, oxidoreductase; HET: HEM; 1.50A
{Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A*
3cv9_A*
Length = 412
Score = 64.6 bits (158), Expect = 1e-11
Identities = 67/394 (17%), Positives = 129/394 (32%), Gaps = 85/394 (21%)
Query: 51 YVEKRHQELGPIYKEKI-GPVEAYFLNDTADVRKVFA---LEGTYPKHILPQCWEKYRKL 106
Y + R GP+++ + +A+ + RK+ L P ++ +
Sbjct: 30 YAQLRDTP-GPLHRVTLYDGRQAWVVTKHEAARKLLGDPRLSSNRTDDNFPATSPRFEAV 88
Query: 107 YGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAG------PQ-QELTKELFKAFEH----- 154
+ +D PE R++ ++ P+ +E+
Sbjct: 89 RESPQAFIGLDPPEHGTRRRMTISE----FTVKRIKGMRPEVEEVVHGFLDEMLAAGPTA 144
Query: 155 DIVESTKANNKPI-IIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLS 213
D+V A P +I +LG P+ H ++ + + A
Sbjct: 145 DLVSQF-ALPVPSMVICRLLGVPYADH--------EFFQDASKRLVQSTDA--------- 186
Query: 214 IKLKLSAWTKFVESVHQSLALASELLHK--MEPFNGDGLSSKLKEVE----NVSPESIRR 267
+ + + L+ + EP G GL L + + E +
Sbjct: 187 --------QSALTARNDLAGYLDGLITQFQTEP--GAGLVGALVADQLANGEIDREELIS 236
Query: 268 MVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREG 324
+ +L AG +TTA S + LL HP +Q L+ + ++ + E
Sbjct: 237 TAM-LLLIAGHETTASMTSLS-VITLL-DHP---EQY-AALRADR-----SLVPGAVEEL 284
Query: 325 LRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRD 383
LR IA R D+E+ G LI G V++ ++ + + P+ R
Sbjct: 285 LRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHR---- 340
Query: 384 ANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
L + G C+G+ LA+ ++
Sbjct: 341 ---------SARHHLAFGFGVHQCLGQNLARLEL 365
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin
biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A
{Amycolatopsis orientalis} SCOP: a.104.1.1
Length = 406
Score = 64.6 bits (158), Expect = 2e-11
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 31/177 (17%)
Query: 247 GDGLSSKLKEVE--NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQL 301
DGL + NV+ E ++ + ++ G +T A I + LL +P Q+
Sbjct: 215 DDGLLGMIVRDHGDNVTDEELKGLCT-ALILGGVETVAGMIGFG-VLALL-DNP---GQI 268
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLLSVF 360
+ L ++ E V+ E +R R KDV I G LI G VL S+
Sbjct: 269 -ELLFESP-----EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSIL 322
Query: 361 SSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
++ + A P P+ +R + + + G CVG LA++ +
Sbjct: 323 MANRDEALTPDPDVLDANR-------------AAVSDVGFGHGIHYCVGAALARSML 366
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron,
metal-binding, monooxygenase, oxidoreductase; HET: HEM;
1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Length = 367
Score = 63.7 bits (156), Expect = 3e-11
Identities = 51/272 (18%), Positives = 94/272 (34%), Gaps = 46/272 (16%)
Query: 115 FMDGPEWMKYRKIMNKYL-LKNYSAGPQQELTKELFKAF--EHDIVESTKANNKPII-IA 170
D P + R + N +E+T +L E D++ES A PI+ I+
Sbjct: 70 TSDPPLHDELRNLTADAFNPSNLPVDFVREVTVKLLSELDEEFDVIESF-AIPLPILVIS 128
Query: 171 HMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQ 230
MLG D+ K+ + S +++ +
Sbjct: 129 KMLGIN------------PDV----KKVKDWSDLVALRLGRAD------EIFSIGRKYLE 166
Query: 231 SLALASELLH--KMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAG-DTTAISTQWI 287
++ + + L K + L+ K+ N+S I ++ AG +TT
Sbjct: 167 LISFSKKELDSRKGKE--IVDLTGKIAN-SNLSELEKEGYFI-LLMIAGNETTTNLIGNA 222
Query: 288 FYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFITRFMPKDVEIRGY 347
+ + +++ L + E LR P R + V+IR
Sbjct: 223 IEDFTLY----NSW-DYVREKGA-LK------AVEEALRFSPPVMRTIRVTKEKVKIRDQ 270
Query: 348 LIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSR 379
+I +G LV + + S++ + F P+ F P R
Sbjct: 271 VIDEGELVRVWIASANRDEEVFKDPDSFIPDR 302
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox
oxidoreductase; HET: HEM; 1.75A {Pseudonocardia
autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Length = 411
Score = 63.4 bits (155), Expect = 3e-11
Identities = 41/180 (22%), Positives = 74/180 (41%), Gaps = 34/180 (18%)
Query: 247 GDGLSSKL-----KEVENVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQ 298
D L S L ++ + +S E + M + +L AG +TT I L HP
Sbjct: 203 DDALLSSLLAVSDEDGDRLSQEELVAMAM-LLLIAGHETTVNLIGNGV--LALLTHP--- 256
Query: 299 DQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLL 357
DQ + L ++ +I+ + E LR RF +DV G IP G +V+L
Sbjct: 257 DQR-KLLAEDP-----SLISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVML 310
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ +++ + + P P++ +R + + + G C+G +LA+ +
Sbjct: 311 GLAAANRDADWMPEPDRLDITR-------------DASGGVFFGHGIHFCLGAQLARLEG 357
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide
monooxygenase, antibiotic biosynthesis, heme, iron,
metal-binding; HET: HEM PXI; 1.7A {Streptomyces
venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A*
2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Length = 436
Score = 63.4 bits (155), Expect = 4e-11
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 247 GDGLSSKL-----KEVENVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQ 298
G+ L S L ++ ++ E + M +L AG +TT I+ ++ LL HP
Sbjct: 230 GEDLLSALVRTSDEDGSRLTSEELLGMAH-ILLVAGHETTVNLIANG-MYALL-SHP--- 283
Query: 299 DQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLL 357
DQL L+ + +++ + E LR T RF + V++ G +IP G VL+
Sbjct: 284 DQL-AALRADM-----TLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV 337
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ + P FP P +F R + L + G C+G LA+ +
Sbjct: 338 VLADAHRTPERFPDPHRFDIRR-------------DTAGHLAFGHGIHFCIGAPLARLEA 384
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A
{Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Length = 411
Score = 63.4 bits (155), Expect = 4e-11
Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 30/177 (16%)
Query: 247 GDGLSSKLKEVEN---VSPESIRRMVIDFILAAG-DTTAISTQWIFYLLGRHPSVQDQLY 302
G + S L V + + G T Q ++ LL + +
Sbjct: 214 GGDVYSMLGAAVGRGEVGETEAVGLAG-PLQIGGEAVTHNVGQMLYLLL-TRR---ELM- 267
Query: 303 QELQKNNDCLNNEIINHVIREGLRMYPIAP--FITRFMPKDVEIRGYLIPKGSLVLLSVF 360
+++ + E LR + R +DVE+ G I G V +S
Sbjct: 268 ARMRERP-----GARGTALDELLRWISHRTSVGLARIALEDVEVHGTRIAAGEPVYVSYL 322
Query: 361 SSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+++ +P FP P++ R +P L Y G C G LA+ Q
Sbjct: 323 AANRDPDVFPDPDRIDLDR-------------DPNPHLAYGNGHHFCTGAVLARMQT 366
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis;
HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB:
2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Length = 417
Score = 62.7 bits (153), Expect = 6e-11
Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 34/180 (18%)
Query: 247 GDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQD 299
D L S L + ++S + + + I +L AG ++T I+ ++ L+ P +
Sbjct: 222 TDDLVSALVQARDQQDSLSEQELLDLAI-GLLVAGYESTTTQIADF-VYLLM-TRP---E 275
Query: 300 QLYQELQKNNDCLNNEIINHVIREGLRMYPIAPF--ITRFMPKDVEIRGYLIPKGSLVLL 357
++L E+I + E R P+ R+ +DV +RG I G VL
Sbjct: 276 LR-RQLLDRP-----ELIPSAVEELTRWVPLGVGTAFPRYAVEDVTLRGVTIRAGEPVLA 329
Query: 358 SVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
S +++ + A FP ++ R P L + G C+G LA+ ++
Sbjct: 330 STGAANRDQAQFPDADRIDVDR-------------TPNQHLGFGHGVHHCLGAPLARVEL 376
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A
{Streptomyces natalensis} PDB: 2x9p_A*
Length = 404
Score = 62.7 bits (153), Expect = 6e-11
Identities = 37/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%)
Query: 247 GDGLSSKLKEVENVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQ 303
G + S+L + ++ + + + + +L AG D+ A + + L HP DQ
Sbjct: 214 GPDIISRLND-GELTEDRVAHLAM-GLLFAGLDSVASIMDNG-VVLLA-AHP---DQR-A 265
Query: 304 ELQKNNDCLNNEIINHVIREGLRMYPIA--PFITRFMPKDVEIRGYLIPKGSLVLLSVFS 361
+ +++ + E LR R+ +D+E G I G LVL +
Sbjct: 266 AALADP-----DVMARAVEEVLRTARAGGSVLPPRYASEDMEFGGVTIRAGDLVLFDLGL 320
Query: 362 SSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+ + F PE+F +R P L + G C+G LA+ ++
Sbjct: 321 PNFDERAFTGPEEFDAAR-------------TPNPHLTFGHGIWHCIGAPLARLEL 363
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide,
filipi metal-binding, oxidoreductase-antibiotic complex;
HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB:
3e5j_A* 3e5k_A* 3e5l_A*
Length = 403
Score = 62.6 bits (153), Expect = 7e-11
Identities = 51/183 (27%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 243 EPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHP 295
P GD L S L E V + +L A DTTA I LL P
Sbjct: 203 NP--GDDLISALITTEDPDGVVDDMFLMNAAG-TLLIAAHDTTACMIGLG-TALLL-DSP 257
Query: 296 SVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSL 354
DQL L+++ ++ + + E LR I F R +DVE+ G I KG
Sbjct: 258 ---DQL-ALLREDP-----SLVGNAVEELLRYLTIGQFGGERVATRDVELGGVRIAKGEQ 308
Query: 355 VLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
V+ V ++ +PA+ PE+F +R P L + GA C+G++LA+
Sbjct: 309 VVAHVLAADFDPAFVEEPERFDITR-------------RPAPHLAFGFGAHQCIGQQLAR 355
Query: 415 TQM 417
++
Sbjct: 356 IEL 358
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105,
oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea
recticatena}
Length = 413
Score = 62.6 bits (153), Expect = 7e-11
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 243 EPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHP 295
EP GD L S+ + + + + +L AG +TTA IS + LL HP
Sbjct: 211 EP--GDDLFSRQIARQRQEGTLDHAGLVSLAF-LLLTAGHETTANMISLG-VVGLL-SHP 265
Query: 296 SVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSL 354
+QL ++ N + E LR + IA +T R +DVEI G I G
Sbjct: 266 ---EQL-TVVKANP-----GRTPMAVEELLRYFTIADGVTSRLATEDVEIGGVSIKAGEG 316
Query: 355 VLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
V++S+ S++ +PA F P R L + G C+G+ LA+
Sbjct: 317 VIVSMLSANWDPAVFKDPAVLDVER-------------GARHHLAFGFGPHQCLGQNLAR 363
Query: 415 TQM 417
++
Sbjct: 364 MEL 366
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET:
HEM; 2.90A {Streptomyces coelicolor}
Length = 417
Score = 62.6 bits (153), Expect = 7e-11
Identities = 44/183 (24%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 243 EPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHP 295
EP D L SKL NV+ E + + + AG +TT I+ LL P
Sbjct: 215 EP--RDDLISKLVTDHLVPGNVTTEQLLSTLG-ITINAGRETTTSMIALS-TLLLL-DRP 269
Query: 296 SVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSL 354
+ EL+K+ +++ + E LR+ +A I R +D+E+ G +P
Sbjct: 270 ---ELP-AELRKDP-----DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDG 320
Query: 355 VLLSVFSSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQ 414
V+ + ++H+P F PE+ R + + G CVG+ LA+
Sbjct: 321 VIALLAGANHDPEQFDDPERVDFHR-------------TDNHHVAFGYGVHQCVGQHLAR 367
Query: 415 TQM 417
++
Sbjct: 368 LEL 370
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase;
HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP:
a.104.1.1
Length = 408
Score = 60.7 bits (148), Expect = 3e-10
Identities = 69/400 (17%), Positives = 137/400 (34%), Gaps = 95/400 (23%)
Query: 55 RHQELGPIYKEKIGPVEAYFLNDTADVRKVFA--------LEGTYPKHILPQCWEKYRKL 106
+E GP + V+A+ ++D ++++ + W +
Sbjct: 23 TLREGGPATWVDVLGVQAWSVSDPVLLKQLLTSSDVSKDARAHWPAFGEVVGTWPLALWV 82
Query: 107 YGCDRGLYFMDGPEWMKYRKIMNKYLLKNYSAG------PQ-QELTKELFKAFEH----- 154
++ GP K R+++ SA P + + L
Sbjct: 83 AV--ENMFTAYGPNHRKLRRLVAPAF----SARRVDAMRPAVEAMVTGLVDRLAELPAGE 136
Query: 155 --DIVESTKANNKPII-IAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPIN 211
D+ + A PI I H++G P +V +F+ + +
Sbjct: 137 PVDLRQEL-AYPLPIAVIGHLMGVPQDRR--------DGFRALVDGVFDTTLDQA----- 182
Query: 212 LSIKLKLSAWTKFVESVHQSLALASELL-HKM-EPFNGDGLSSKL-------KEVENVSP 262
+ + + + +L+ K P GD ++S L + + +SP
Sbjct: 183 -----------EAQANTARLYEVLDQLIAAKRATP--GDDMTSLLIAARDDEGDGDRLSP 229
Query: 263 ESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINH 319
E +R ++ +++AG +TT I + LL P DQL ++K
Sbjct: 230 EELRDTLL-LMISAGYETTVNVIDQA-VHTLL-TRP---DQL-ALVRKGE-----VTWAD 277
Query: 320 VIREGLRMYPIAPFIT-RFMPKDVEIR-GYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQP 377
V+ E LR P + R+ D+ + G I +G +L S +++ +P + + F
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDA 337
Query: 378 SRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+R L + G C+G LA+ ++
Sbjct: 338 TR-------------TVKEHLAFGHGVHFCLGAPLARMEV 364
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide
antibiotics, 12- and 14- carbon macrolactone
monooxygenase, heme; HET: HEM; 1.92A {Streptomyces
coelicolor} SCOP: a.104.1.1
Length = 411
Score = 57.6 bits (140), Expect = 2e-09
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 23/146 (15%)
Query: 243 EPFNGDGLSSKLKEVE----NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHP 295
P GD L+S L + +++ I + ++AAG +TT I + L HP
Sbjct: 208 AP--GDDLTSALIQASENGDHLTDAEIVSTLQ-LMVAAGHETTISLIVNA-VVNLS-THP 262
Query: 296 SVQDQLYQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSL 354
+Q + + V+ E LR + RF +DV + +IP G
Sbjct: 263 ---EQR-ALVLSGE-----AEWSAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDA 313
Query: 355 VLLSVFSSSHNPA-YFPSPEQFQPSR 379
+++S + + + P+ ++F +R
Sbjct: 314 LIVSYGALGRDERAHGPTADRFDLTR 339
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 58.1 bits (140), Expect = 3e-09
Identities = 50/325 (15%), Positives = 106/325 (32%), Gaps = 95/325 (29%)
Query: 136 YSAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHM----LGTPFISHYKELSK--EIH 189
+ Q +E F + E A+++P A + LG ++S E SK +
Sbjct: 27 FFIASQL---QEQFNKILPEPTEGFAADDEPTTPAELVGKFLG--YVSSLVEPSKVGQFD 81
Query: 190 DLSQVVHKIFE---------HSAALSMLPINLSIKLKLSAWTK-FVESVHQ-----SLAL 234
+ + FE H+ A +L N + +K K ++ +
Sbjct: 82 QVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKS 141
Query: 235 ASELLHKMEP--------FNGDGLSSK-LKEVENVSPESIRRMVIDFILAAGDTTAISTQ 285
S L + F G G + +E+ ++ ++ +V D I + +T
Sbjct: 142 NSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLY-QTYHVLVGDLIKFSAET------ 194
Query: 286 WIFYLLGRHPSVQDQLYQE-------LQKNNDCLNNEIINHVIREGLRMYPIA-PFIT-- 335
L R ++++ + L+ ++ + + + + PI+ P I
Sbjct: 195 --LSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSI--------PISCPLIGVI 244
Query: 336 ---RFM---------PKDV--EIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWK 381
++ P ++ ++G LV + + S E F
Sbjct: 245 QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAET------DSWESF------ 292
Query: 382 RDANKKYINVVEPYASLPYAMGARS 406
+ +K I V+ + +G R
Sbjct: 293 FVSVRKAITVL-------FFIGVRC 310
Score = 47.0 bits (111), Expect = 1e-05
Identities = 65/359 (18%), Positives = 107/359 (29%), Gaps = 118/359 (32%)
Query: 68 GPVEAYFLNDTADVRKVFALEGTYPKHI-------------LPQCWEKYRKLYGCDRGLY 114
G + YF ++R ++ TY + L + K++ +GL
Sbjct: 164 GNTDDYF----EELRDLYQ---TYHVLVGDLIKFSAETLSELIRTTLDAEKVFT--QGLN 214
Query: 115 FMDGPEWMKYRKIM--NKYLLKNYSAGPQQELTKELFKAFEHDIVESTKANNKPIIIAHM 172
+ EW++ YLL + P + H +V A +
Sbjct: 215 IL---EWLENPSNTPDKDYLLSIPISCPLIGVI-----QLAHYVV-----------TAKL 255
Query: 173 LG-TPFISHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQS 231
LG TP EL + + + +A I + +W F SV ++
Sbjct: 256 LGFTP-----GELRSYLKGATGHSQGLV--TAVA----IAET-----DSWESFFVSVRKA 299
Query: 232 L-----------------ALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDF-- 272
+ +L +L N +G+ S + + N++ E ++ V
Sbjct: 300 ITVLFFIGVRCYEAYPNTSLPPSILEDSLE-NNEGVPSPMLSISNLTQEQVQDYVNKTNS 358
Query: 273 ILAAGDTTAIS-----TQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVIREGL-- 325
L AG IS + G P LY LN + GL
Sbjct: 359 HLPAGKQVEISLVNGAKN--LVVSG-PPQ---SLYG--------LNLTLRKAKAPSGLDQ 404
Query: 326 -RMYPIAPFITRFMPKDVEIRGYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRD 383
R PF R K K S L V S H+ P+ + K +
Sbjct: 405 SR----IPFSER---K---------LKFSNRFLPVASPFHSHLLVPASDLINKDLVKNN 447
Score = 36.2 bits (83), Expect = 0.025
Identities = 54/292 (18%), Positives = 82/292 (28%), Gaps = 118/292 (40%)
Query: 57 QELGPIYKEKIGPVEAYFLNDTADV-RKVF--A---LEGTYPKHILPQCWEKYRKLYGCD 110
QE G +G ++ Y T+ + V+ A + TY IL L
Sbjct: 1627 QEQG------MG-MDLY---KTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLT--- 1673
Query: 111 RGLYFMDGPEWMKYRKIMNKYLLKNYSAGPQQEL-TKELFKA---------FEHD----- 155
++F G K ++I Y + +L T+++FK F +
Sbjct: 1674 --IHF-GGE---KGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLS 1727
Query: 156 ---------------IVESTKAN---NKPIIIA-HMLGTPFISHYKE----------LSK 186
E K+ A H LG E +S
Sbjct: 1728 ATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLG--------EYAALASLADVMS- 1778
Query: 187 EIHDLSQVVHK--IFEHSAA---------LSMLPIN---LSIKLKLSAWTKFVESVHQSL 232
I L +VV + A M+ IN ++ A VE V +
Sbjct: 1779 -IESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKR- 1836
Query: 233 ALASELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAIST 284
L+ E N NV + V AGD A+ T
Sbjct: 1837 --TGWLV---EIVN-----------YNVENQQY---VA-----AGDLRALDT 1864
Score = 28.9 bits (64), Expect = 4.0
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 12/57 (21%)
Query: 1 MRITTNDVTGTEVECMATE---MSKVIPTPRSWPI-FG--------TLISILKEGGG 45
+R+ + ++ V+C+ + + FG L K+G G
Sbjct: 468 LRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTG 524
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin
aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes
teichomyceticus} PDB: 3o1a_A*
Length = 384
Score = 52.6 bits (127), Expect = 1e-07
Identities = 36/177 (20%), Positives = 66/177 (37%), Gaps = 36/177 (20%)
Query: 247 GDGLSSKLKEVE--NVSPESIRRMVIDFILAAG-DTTA--ISTQWIFYLLGRHPSVQDQL 301
GDG+ + +S E + + L + A ++ + L+ HP DQ+
Sbjct: 196 GDGMIGVIVREHGAEISDEELAGLAE-GNLIMAAEQMAAQLAVA-VLLLV-THP---DQM 249
Query: 302 YQELQKNNDCLNNEIINHVIREGLRMYPIAPFIT-RFMPKDVEIRGYLIPKGSLVLLSVF 360
L++ E+I+ E LR I R DV + G I G ++ S+
Sbjct: 250 -ALLREKP-----ELIDSATEEVLRHASIVEAPAPRVALADVRMAGRDIHAGDVLTCSML 303
Query: 361 SSSHNPAYFPSPEQFQPSRWKRDANKKYINVVEPYASLPYAMGARSCVGRKLAQTQM 417
+++ P ++F +R E + + G C+G LA+ Q+
Sbjct: 304 ATNRAP-----GDRFDITR-------------EKATHMAFGHGIHHCIGAPLARLQL 342
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 44.8 bits (105), Expect = 4e-05
Identities = 59/433 (13%), Positives = 131/433 (30%), Gaps = 147/433 (33%)
Query: 8 VTGTEVECMATEMSKVIPTPRSWPIFGTLISILKEGGGKQLHRYVEKRHQE-----LGPI 62
++ E++ + V T R L L + + ++VE+ + + PI
Sbjct: 46 LSKEEIDHIIMSKDAVSGTLR-------LFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 63 YKEKIGP---VEAY--FLNDTADVRKVFALEGTYPKHIL-PQCWEKYRK----------- 105
E+ P Y + + +VFA ++ Q + K R+
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFA-----KYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 106 -LYG-------------C-DRGL--YFMDGPEWMKYRK---------IMNKYLL---KNY 136
+ G C + W+ + ++ K L N+
Sbjct: 154 LIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNW 213
Query: 137 SAGPQQ----ELTKELFKAFEHDIVESTKANNKPIIIAH----------------MLGTP 176
++ +L +A +++S N +++ + +L T
Sbjct: 214 TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 177 FIS--------HYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIK---LKLSAWTKFV 225
F +S + H ++ S+L L + L
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMT------LTPDEVKSLLLKYLDCRPQDLPREV----- 322
Query: 226 ESVH-QSLALASELLHKM----EPF---NGDGLSSKLKE-VENVSPESIRRMVIDF-ILA 275
+ + + L++ +E + + + N D L++ ++ + + P R+M +
Sbjct: 323 LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382
Query: 276 AGDTTAISTQ-----W---IFY-------------LLGRHP-----SVQDQLYQELQKNN 309
+ I T W I L+ + P S+ +Y EL+
Sbjct: 383 --PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS-IYLELKVKL 439
Query: 310 D---CLNNEIINH 319
+ L+ I++H
Sbjct: 440 ENEYALHRSIVDH 452
Score = 39.5 bits (91), Expect = 0.003
Identities = 56/387 (14%), Positives = 105/387 (27%), Gaps = 122/387 (31%)
Query: 3 ITTNDVTGTEVECMATEMSKVIPTPRSWPIFGTLISILKEGGGKQL-HRYVEKRHQELGP 61
+TT T+ A + + S L K L +Y++ R Q+L P
Sbjct: 270 LTTRFKQVTDFL-SAATTTHISLDHHSMT--------LTPDEVKSLLLKYLDCRPQDL-P 319
Query: 62 IYKEKIGPVEAYFLNDTADVRKVFALEGTYPKHILPQCWEKYRKLYGCDRGLYFMDGPEW 121
P + A W+ ++ CD
Sbjct: 320 REVLTTNPR----------RLSIIAES----IRDGLATWDNWKH-VNCD----------- 353
Query: 122 MKYRKIMNKYL--LKNYSAGPQQELTKELFKA---FEHD--IVEST--------KANNKP 166
K I+ L L+ P +++F F I ++
Sbjct: 354 -KLTTIIESSLNVLE-----P--AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 167 IIIAHMLGTPFI-SHYKELSKEIHDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFV 225
+++ + + KE + I + + E+ AL
Sbjct: 406 VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL-------------------- 445
Query: 226 ESVHQSL-----ALASELLHKMEPFNGDG-----LSSKLKEVENV-SPESIRRMVIDF-- 272
H+S+ + + P D + LK +E+ R + +DF
Sbjct: 446 ---HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF 502
Query: 273 -----------ILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLNNEIINHVI 321
A+G Q FY + D Y+ L N I++ +
Sbjct: 503 LEQKIRHDSTAWNASGSILNTLQQLKFY--KPYICDNDPKYERLV-------NAILDFLP 553
Query: 322 REGLRMYPIAPF--ITR--FMPKDVEI 344
+ + + + + R M +D I
Sbjct: 554 KIEENLI-CSKYTDLLRIALMAEDEAI 579
Score = 35.2 bits (80), Expect = 0.042
Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 25/139 (17%)
Query: 238 LLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPS- 296
L + F + K+V+++ + + ID I+ + D + T +F+ L
Sbjct: 22 LSVFEDAFVDN---FDCKDVQDMPKSILSKEEIDHIIMSKDAVS-GTLRLFWTLLSKQEE 77
Query: 297 -VQDQLYQELQKNNDCLNNEIINHVIREGL----------RMY----PIAP-FITRFMPK 340
VQ + + L+ N L + I + + R+Y A ++R P
Sbjct: 78 MVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY 137
Query: 341 DVEIRGYLI---PKGSLVL 356
++R L+ P ++++
Sbjct: 138 L-KLRQALLELRPAKNVLI 155
>3pvt_A Phenylacetic acid degradation protein PAAA; protein-protein
complex, ferritin-like fold, bacterial multi
monooxygenase, structural genomics; HET: 3HC; 2.03A
{Escherichia coli} PDB: 3pvr_A* 3pvy_A* 3pw1_A* 3pw8_C*
3pwq_C
Length = 311
Score = 31.3 bits (70), Expect = 0.53
Identities = 6/41 (14%), Positives = 17/41 (41%)
Query: 262 PESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLY 302
P++ R+ +I I + + + R P+++ +
Sbjct: 26 PDAYRKTLIRQIGQHAHSEIVGMLPEGNWITRAPTLRRKAI 66
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative
phosphosugar isomerase, structural genomics, joint for
structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus
subtilis}
Length = 329
Score = 31.0 bits (71), Expect = 0.73
Identities = 6/51 (11%), Positives = 17/51 (33%)
Query: 153 EHDIVESTKANNKPIIIAHMLGTPFISHYKELSKEIHDLSQVVHKIFEHSA 203
E + + I+ + + +++ + + L V K + A
Sbjct: 130 EALAINTNYGVLYQIVFGTLQVLENNTKFEQAIEGLDQLQAVYEKALKQEA 180
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll,
selenomethionine; 1.90A {Xanthomonas citri} SCOP:
b.18.1.13 c.69.1.21
Length = 615
Score = 29.4 bits (65), Expect = 2.4
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 341 DVEIR--GYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDA 384
+ + G V++ V SS P Y +P+ + P+ +
Sbjct: 546 QFGLPTANHTFQPGHRVMVQV-QSSLFPLYDRNPQTYVPNIFFAKP 590
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP;
alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A
{Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A*
3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Length = 418
Score = 29.0 bits (65), Expect = 3.2
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 364 HNPAYFPSPEQFQPSRWKRDANKK 387
+NP F ++ +PS + + K+
Sbjct: 392 NNPFMFFEKDELKPSAYTEELKKR 415
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
pyrophosphokinase/dihydropteroate...; folate, TIM
barrel, synthase, HPPK, DHPS; 2.20A {Francisella
tularensis subsp} PDB: 3mcn_A* 3mco_A*
Length = 442
Score = 28.9 bits (65), Expect = 3.3
Identities = 7/44 (15%), Positives = 12/44 (27%), Gaps = 4/44 (9%)
Query: 151 AFEHD-IVESTKANNKPIIIAHMLGTPF---ISHYKELSKEIHD 190
+ + NK +I H LG + + D
Sbjct: 301 CNNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCD 344
>3bx6_A Alpha-1-acid glycoprotein; plasma protein, acute phase protein,
polymorphism, pyrrolidone carboxylic acid, signaling
protei; 1.80A {Homo sapiens} PDB: 3kq0_A 3apu_A* 3apv_A*
3apw_A* 3apx_A*
Length = 192
Score = 28.3 bits (62), Expect = 3.4
Identities = 20/134 (14%), Positives = 39/134 (29%), Gaps = 9/134 (6%)
Query: 189 HDLSQVVHKIFEHSAALSMLPINLSIKLKLSAWTKFVESVHQSLALASELLHKMEP-FNG 247
L Q+ K F ++A N S++ + + F + + E + +
Sbjct: 16 ATLDQITGKWFYIASAFRNEEYNKSVQEIQATFFYFTPNKTEDTIFLREYQTRQDQCIYN 75
Query: 248 DGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAI--------STQWIFYLLGRHPSVQD 299
+ +E +S + +L DT W + P
Sbjct: 76 TTYLNVQRENGTISRYVGGQEHFAHLLILRDTKTYMLAFDVNDEKNWGLSVYADKPETTK 135
Query: 300 QLYQELQKNNDCLN 313
+ E + DCL
Sbjct: 136 EQLGEFYEALDCLR 149
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad,
alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus}
SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Length = 652
Score = 29.0 bits (64), Expect = 3.9
Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 341 DVEIR--GYLIPKGSLVLLSVFSSSHNPAYFPSPEQFQPSRWKRDA 384
+ ++ KG +++ + SS P Y +P++F P+ +
Sbjct: 556 HFTLPAVNHVFAKGHRIMVQI-QSSWFPLYDRNPQKFVPNIFDAKP 600
>2cwq_A Hypothetical protein TTHA0727; conserved hypothetical protein, all
alpha, structural genomi NPPSFA; 1.90A {Thermus
thermophilus} SCOP: a.152.1.4
Length = 137
Score = 27.3 bits (60), Expect = 5.1
Identities = 8/49 (16%), Positives = 18/49 (36%)
Query: 237 ELLHKMEPFNGDGLSSKLKEVENVSPESIRRMVIDFILAAGDTTAISTQ 285
+L M G+GL + + +P + + A + A+ +
Sbjct: 27 RVLQAMAENLGEGLPRAIPLLAEKAPGLLLEHGRSWTYAMPEKGALDEK 75
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle,
alternative splicing, endocytosis, lipid-binding, golgi
apparatus, adaptor, membrane, transport; HET: IHP; 2.59A
{Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Length = 621
Score = 28.0 bits (62), Expect = 6.7
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Query: 204 ALSMLPINLSIKLKLSAWTKFVESVHQSL---------ALASELLHKM-EPFNGDGLSSK 253
AL + S + A +E+V +L A +LL+ M + N + ++
Sbjct: 349 ALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAE 408
Query: 254 LKEVENVSPESIRRMVIDFILAAGDTTAISTQWIFYLLGRHPSVQDQLYQELQKNNDCLN 313
+ + SIR ++ + + A+ W D + ++ D ++
Sbjct: 409 MLSYLETADYSIREEIVLKVAILAEKYAVDYTWYV----------DTILNLIRIAGDYVS 458
Query: 314 NEIINHVIR 322
E+ VI+
Sbjct: 459 EEVWYRVIQ 467
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural
genomics, midwest center for structural genomics, MCSG;
1.65A {Thermoplasma volcanium}
Length = 111
Score = 26.5 bits (59), Expect = 8.3
Identities = 4/29 (13%), Positives = 12/29 (41%)
Query: 165 KPIIIAHMLGTPFISHYKELSKEIHDLSQ 193
+II+ + ++ ++ I +S
Sbjct: 29 TMLIISVLGNGSTRQNFNDIRSSIPGISS 57
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A
{Caenorhabditis elegans} PDB: 4ag9_A*
Length = 165
Score = 27.2 bits (60), Expect = 8.7
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 330 IAPFITRFMPKDVEIRGYL---IPKGSLVLLSVFSSSHNPAYFPSPEQFQP--SRWKRDA 384
+AP I +P + ++R KG + LLS +S N E F+ +
Sbjct: 10 LAPHIPSNLPDNFKVRPLAKDDFSKGYVDLLSQLTSVGN----LDQEAFEKRFEAMRTSV 65
Query: 385 NKKYINVVE 393
+I V+E
Sbjct: 66 PNYHIVVIE 74
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 26.8 bits (58), Expect = 8.7
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 381 KRDANKKYINVVEPYA--SLPYAMGARSCV 408
++ A KK ++ YA S P A+ ++ +
Sbjct: 18 EKQALKKLQASLKLYADDSAP-ALAIKATM 46
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0762 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 6,423,037
Number of extensions: 383048
Number of successful extensions: 1156
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1014
Number of HSP's successfully gapped: 111
Length of query: 423
Length of database: 6,701,793
Length adjustment: 96
Effective length of query: 327
Effective length of database: 4,021,377
Effective search space: 1314990279
Effective search space used: 1314990279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.4 bits)