Query psy2145
Match_columns 808
No_of_seqs 411 out of 3021
Neff 10.0
Searched_HMMs 29240
Date Fri Aug 16 17:11:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 1.6E-69 5.6E-74 621.6 61.8 500 16-729 65-569 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 8E-69 2.7E-73 615.9 65.6 479 49-737 5-483 (570)
3 1e07_A Carcinoembryonic antige 100.0 2.2E-58 7.6E-63 538.4 54.0 555 13-731 72-641 (642)
4 3dmk_A DOWN syndrome cell adhe 100.0 1.3E-56 4.5E-61 538.4 50.4 485 16-731 310-810 (816)
5 3dmk_A DOWN syndrome cell adhe 100.0 1.5E-55 5.1E-60 529.2 51.1 494 13-737 200-720 (816)
6 2ocw_A Polymeric-immunoglobuli 100.0 1.2E-53 4.3E-58 492.8 50.5 463 53-733 4-549 (585)
7 1e07_A Carcinoembryonic antige 100.0 2.8E-53 9.7E-58 495.2 53.2 523 53-733 3-560 (642)
8 2ec8_A MAST/stem cell growth f 100.0 1E-54 3.5E-59 494.6 31.1 452 48-733 35-513 (524)
9 3qs9_E FL cytokine receptor; i 100.0 9.8E-53 3.4E-57 473.4 38.9 443 55-734 54-514 (527)
10 3v2a_R Vascular endothelial gr 100.0 2.1E-55 7.3E-60 525.2 11.5 500 16-738 187-764 (772)
11 2rcj_C Light chain; immunoglob 100.0 2.8E-51 9.4E-56 466.2 44.4 463 52-718 3-512 (523)
12 1z7z_I Intercellular adhesion 100.0 4E-51 1.4E-55 455.8 33.7 421 54-731 4-450 (450)
13 3v2a_R Vascular endothelial gr 100.0 3.9E-51 1.3E-55 488.4 17.7 502 16-736 90-671 (772)
14 3kld_A Contactin 4, axcam, BIG 100.0 6.2E-48 2.1E-52 420.0 32.8 372 181-730 3-383 (384)
15 3laf_A Deleted in colorectal c 100.0 8E-46 2.7E-50 406.7 37.9 372 181-732 19-403 (403)
16 3kld_A Contactin 4, axcam, BIG 100.0 4.9E-46 1.7E-50 405.1 32.1 369 49-598 5-383 (384)
17 3qs7_E FL cytokine receptor; i 100.0 1.2E-45 4E-50 404.9 33.9 359 184-735 49-419 (423)
18 1cs6_A Axonin-1; neural cell a 100.0 1.3E-45 4.3E-50 402.0 32.4 366 182-730 3-382 (382)
19 3laf_A Deleted in colorectal c 100.0 3E-45 1E-49 402.1 35.1 369 49-599 21-402 (403)
20 2ocw_A Polymeric-immunoglobuli 100.0 2.2E-44 7.5E-49 415.5 41.6 404 16-600 79-548 (585)
21 2v5m_A Dscam; neurobiology SPL 100.0 6E-45 2.1E-49 397.6 32.7 357 183-728 3-387 (388)
22 3p3y_A Neurofascin; IG domains 100.0 1.5E-44 5.1E-49 396.7 33.5 374 181-730 14-403 (404)
23 2ec8_A MAST/stem cell growth f 100.0 7.4E-46 2.5E-50 421.6 23.7 400 16-601 84-513 (524)
24 1bih_A Hemolin; insect immunit 100.0 5.1E-45 1.7E-49 399.1 28.8 376 181-728 4-394 (395)
25 3qs7_E FL cytokine receptor; i 100.0 4E-44 1.4E-48 392.8 32.3 389 21-601 4-417 (423)
26 1cs6_A Axonin-1; neural cell a 100.0 1.1E-43 3.9E-48 386.5 30.9 363 49-597 4-381 (382)
27 3p3y_A Neurofascin; IG domains 100.0 1.5E-43 5E-48 388.8 31.8 365 55-598 23-403 (404)
28 3qs9_E FL cytokine receptor; i 100.0 1.2E-43 4.2E-48 399.4 29.3 377 192-762 57-443 (527)
29 2v5m_A Dscam; neurobiology SPL 100.0 3E-43 1E-47 384.1 30.1 357 49-596 3-387 (388)
30 1bih_A Hemolin; insect immunit 100.0 1.6E-43 5.5E-48 387.3 25.6 374 49-596 6-394 (395)
31 1z7z_I Intercellular adhesion 100.0 9.3E-43 3.2E-47 388.2 30.2 380 18-598 56-449 (450)
32 2rcj_C Light chain; immunoglob 100.0 1.7E-41 5.9E-46 385.5 38.2 372 188-727 5-417 (523)
33 2rik_A Titin; I-SET IG fold, p 100.0 7E-40 2.4E-44 340.9 40.6 280 314-729 4-283 (284)
34 2rik_A Titin; I-SET IG fold, p 100.0 1.8E-38 6.3E-43 330.2 41.7 280 181-597 3-283 (284)
35 1qgc_4 Protein (immunoglobulin 100.0 1E-40 3.5E-45 370.4 21.9 373 185-727 3-436 (438)
36 1qgc_4 Protein (immunoglobulin 100.0 3.8E-40 1.3E-44 365.8 22.8 371 53-594 5-435 (438)
37 1wio_A CD4, T-cell surface gly 100.0 1.5E-40 5.1E-45 359.1 17.8 315 193-729 4-362 (363)
38 1wio_A CD4, T-cell surface gly 100.0 4.9E-40 1.7E-44 355.0 19.9 314 61-597 5-362 (363)
39 2yd9_A Receptor-type tyrosine- 100.0 7.3E-37 2.5E-41 321.5 29.0 287 314-737 5-298 (304)
40 2y25_A Myomesin; structural pr 100.0 2.4E-37 8.3E-42 327.2 25.5 299 314-731 6-316 (317)
41 2yd9_A Receptor-type tyrosine- 100.0 9.5E-36 3.3E-40 313.0 29.0 284 181-601 4-294 (304)
42 2wim_A N-CAM 2, NCAM2, neural 100.0 1.2E-35 4.2E-40 310.0 28.7 276 315-732 4-286 (291)
43 1igt_B IGG2A intact antibody - 100.0 4.5E-36 1.5E-40 333.3 25.5 383 53-585 4-432 (444)
44 1igt_B IGG2A intact antibody - 100.0 4.1E-36 1.4E-40 333.7 24.4 380 188-717 5-432 (444)
45 1qz1_A Neural cell adhesion mo 100.0 5.2E-35 1.8E-39 305.2 31.2 276 315-731 2-291 (291)
46 2y25_A Myomesin; structural pr 100.0 3.7E-36 1.3E-40 318.1 22.7 300 181-598 5-315 (317)
47 2wim_A N-CAM 2, NCAM2, neural 100.0 1.1E-34 3.8E-39 302.7 31.6 277 182-600 3-286 (291)
48 2y23_A Myomesin; structural pr 100.0 7.1E-35 2.4E-39 307.5 26.8 298 324-729 10-311 (312)
49 1hzh_H IGG, immunoglobulin hea 100.0 4.3E-35 1.5E-39 326.6 26.1 380 189-719 6-443 (457)
50 1qz1_A Neural cell adhesion mo 100.0 4.8E-34 1.7E-38 297.9 32.3 275 183-598 2-290 (291)
51 1hzh_H IGG, immunoglobulin hea 100.0 4.8E-35 1.6E-39 326.3 23.0 381 53-586 4-442 (457)
52 2y23_A Myomesin; structural pr 100.0 3.3E-34 1.1E-38 302.4 27.2 299 57-408 9-311 (312)
53 1iga_A IGA1; immunoglobulin; N 100.0 4E-33 1.4E-37 312.2 35.2 383 52-587 4-443 (475)
54 1iga_A IGA1; immunoglobulin; N 100.0 4.1E-33 1.4E-37 312.1 34.4 380 188-719 6-443 (475)
55 1ry7_B FGFR-3, fibroblast grow 100.0 2.2E-35 7.4E-40 314.8 11.1 298 322-733 15-330 (334)
56 1igy_B IGG1 intact antibody MA 100.0 2E-36 6.7E-41 335.1 2.2 379 53-586 3-423 (434)
57 2o26_X MAST/stem cell growth f 100.0 1.6E-33 5.4E-38 293.9 23.9 268 314-732 11-290 (290)
58 1igy_B IGG1 intact antibody MA 100.0 7.9E-36 2.7E-40 330.2 3.2 376 189-719 5-424 (434)
59 2o26_X MAST/stem cell growth f 100.0 2.8E-32 9.5E-37 284.4 26.5 268 181-599 10-289 (290)
60 1ry7_B FGFR-3, fibroblast grow 100.0 4.2E-34 1.5E-38 304.8 12.8 304 49-412 8-330 (334)
61 4dep_C Interleukin-1 receptor 100.0 2.8E-33 9.6E-38 300.4 17.9 280 321-730 13-333 (349)
62 4fqp_A Poliovirus receptor; im 100.0 2.2E-32 7.6E-37 288.5 23.9 273 319-732 4-306 (313)
63 3o4o_C Interleukin-1 receptor 100.0 7.9E-34 2.7E-38 303.3 10.2 286 314-731 17-336 (339)
64 3ejj_X Macrophage colony-stimu 100.0 6.8E-32 2.3E-36 281.2 24.7 275 315-733 4-284 (289)
65 4fqp_A Poliovirus receptor; im 100.0 8.1E-32 2.8E-36 284.2 25.5 275 186-601 3-307 (313)
66 3oq3_B IFN-alpha/beta binding 100.0 7.4E-32 2.5E-36 286.5 24.5 265 323-729 37-329 (329)
67 1itb_B Type 1 interleukin-1 re 100.0 6.3E-33 2.1E-37 293.1 15.7 274 323-730 13-314 (315)
68 4fom_A Poliovirus receptor-rel 100.0 5.8E-33 2E-37 292.3 14.0 273 324-733 8-303 (308)
69 3o4o_C Interleukin-1 receptor 100.0 6.9E-33 2.4E-37 296.0 14.1 287 181-597 16-334 (339)
70 3oq3_B IFN-alpha/beta binding 100.0 2.9E-31 9.8E-36 282.0 26.1 266 57-407 37-328 (329)
71 1zvo_C Myeloma immunoglobulin 100.0 9.2E-30 3.2E-34 286.6 39.5 422 189-727 6-500 (512)
72 3ejj_X Macrophage colony-stimu 100.0 7E-31 2.4E-35 273.6 27.8 272 51-411 6-283 (289)
73 1zvo_C Myeloma immunoglobulin 100.0 1.2E-29 4E-34 285.8 39.5 407 53-596 4-501 (512)
74 3rjd_A High affinity immunoglo 100.0 1.1E-30 3.8E-35 267.7 28.4 251 316-729 2-261 (262)
75 2jll_A NCAM2, neural cell adhe 100.0 2E-29 6.7E-34 274.8 39.7 368 183-730 1-384 (389)
76 4dep_C Interleukin-1 receptor 100.0 1E-31 3.4E-36 288.3 21.1 279 55-409 13-333 (349)
77 3u83_A Poliovirus receptor-rel 100.0 5.3E-31 1.8E-35 280.4 25.5 275 315-734 14-324 (331)
78 1itb_B Type 1 interleukin-1 re 100.0 2.9E-32 1E-36 287.9 14.9 272 57-408 13-313 (315)
79 4fom_A Poliovirus receptor-rel 100.0 3.9E-32 1.3E-36 285.9 15.4 272 192-600 8-302 (308)
80 2wng_A Tyrosine-protein phosph 100.0 6.4E-31 2.2E-35 279.2 21.9 275 316-726 4-315 (327)
81 4dkd_C Macrophage colony-stimu 100.0 2E-31 6.9E-36 278.1 16.7 274 314-732 3-283 (292)
82 3rjd_A High affinity immunoglo 100.0 7.1E-30 2.4E-34 261.7 27.1 242 50-399 2-249 (262)
83 2nzi_A Titin; IG-domain, FNIII 100.0 1.6E-29 5.6E-34 265.5 29.6 265 314-724 3-284 (305)
84 2jll_A NCAM2, neural cell adhe 100.0 1.2E-28 4.2E-33 268.4 37.5 270 53-407 4-286 (389)
85 3u83_A Poliovirus receptor-rel 100.0 2.6E-30 8.8E-35 275.0 23.3 278 183-601 14-323 (331)
86 3mjg_X Beta-type platelet-deri 100.0 1.8E-30 6.2E-35 270.5 20.8 269 317-735 2-283 (289)
87 2oz4_A Intercellular adhesion 100.0 5.4E-30 1.8E-34 263.2 23.4 248 315-731 6-265 (265)
88 4dkd_C Macrophage colony-stimu 100.0 2.3E-30 7.7E-35 270.1 20.0 274 181-599 2-282 (292)
89 2wng_A Tyrosine-protein phosph 100.0 2.9E-30 1E-34 274.1 21.0 274 184-593 4-314 (327)
90 2nzi_A Titin; IG-domain, FNIII 100.0 9.5E-29 3.2E-33 259.6 31.9 278 182-591 3-283 (305)
91 3vh8_G Killer cell immunoglobu 100.0 2.4E-30 8.2E-35 273.3 16.9 276 314-732 23-315 (316)
92 3mjg_X Beta-type platelet-deri 100.0 2.4E-29 8.3E-34 261.9 23.7 266 185-601 2-281 (289)
93 2oz4_A Intercellular adhesion 100.0 6.2E-29 2.1E-33 255.2 25.7 249 181-598 4-264 (265)
94 3vh8_G Killer cell immunoglobu 100.0 1.9E-29 6.5E-34 266.4 19.8 276 181-599 22-314 (316)
95 2a38_A Titin; Z1Z2, structural 100.0 7.9E-28 2.7E-32 234.2 23.7 190 501-729 3-194 (194)
96 3rbs_A Myomesin-1; immunoglobu 100.0 2.6E-28 8.7E-33 239.5 18.6 201 503-729 3-206 (207)
97 2j8h_A Titin, connectin; cardi 100.0 3.5E-27 1.2E-31 230.3 22.0 192 502-730 3-197 (197)
98 3lcy_A Titin; A-BAND, IG tande 100.0 2.3E-27 7.8E-32 231.5 20.6 193 500-731 4-197 (197)
99 1za6_B IGG heavy chain; immuno 99.9 2.3E-27 7.7E-32 253.5 19.4 290 53-398 4-330 (344)
100 3rbs_A Myomesin-1; immunoglobu 99.9 1E-26 3.5E-31 228.1 21.7 195 55-275 8-205 (207)
101 2yd6_A PTPRD protein; hydrolas 99.9 6E-26 2.1E-30 224.4 25.8 196 502-732 5-206 (212)
102 2a38_A Titin; Z1Z2, structural 99.9 3.5E-26 1.2E-30 222.6 22.5 190 181-408 3-194 (194)
103 2yd1_A Tyrosine-protein phosph 99.9 1E-25 3.4E-30 222.8 25.4 193 502-733 5-203 (212)
104 2wqr_A IG epsilon chain C regi 99.9 3.7E-27 1.3E-31 249.5 16.0 259 331-719 25-309 (323)
105 2wv3_A Neuroplastin; igcam, me 99.9 1.9E-25 6.4E-30 216.6 25.2 179 502-729 2-189 (190)
106 2r15_A Myomesin-1; sarcomeric 99.9 1.7E-25 5.7E-30 221.1 24.1 195 517-731 15-211 (212)
107 2wqr_A IG epsilon chain C regi 99.9 1.1E-26 3.8E-31 245.9 16.2 263 66-398 25-309 (323)
108 2va4_A NCAM2, N-CAM 2, neural 99.9 2.6E-25 8.9E-30 215.9 24.4 183 503-729 2-192 (192)
109 1za6_B IGG heavy chain; immuno 99.9 2.6E-26 8.9E-31 245.3 18.7 282 323-719 8-330 (344)
110 2j8h_A Titin, connectin; cardi 99.9 2.4E-25 8.1E-30 217.2 23.8 191 182-408 3-196 (197)
111 4fa8_A Secreted protein BARF1; 99.9 1.4E-26 4.7E-31 225.8 14.2 170 515-723 4-195 (203)
112 2yd6_A PTPRD protein; hydrolas 99.9 1.3E-24 4.4E-29 214.8 26.0 196 181-410 4-205 (212)
113 3lcy_A Titin; A-BAND, IG tande 99.9 7.4E-25 2.5E-29 213.6 23.7 191 181-409 5-196 (197)
114 2iep_A Muscle-specific kinase 99.9 8.6E-26 2.9E-30 219.3 15.5 185 501-732 5-192 (192)
115 2yd1_A Tyrosine-protein phosph 99.9 2.6E-24 8.9E-29 212.6 26.2 190 49-278 6-201 (212)
116 2c5d_C AXL oncogene, tyrosine- 99.9 5.9E-25 2E-29 214.0 21.1 178 502-728 1-191 (195)
117 2wv3_A Neuroplastin; igcam, me 99.9 3.7E-24 1.3E-28 207.5 25.9 177 53-276 6-189 (190)
118 3grw_A Fibroblast growth facto 99.9 9.8E-25 3.3E-29 220.3 21.0 198 501-736 9-224 (241)
119 2v5t_A NCAM2, N-CAM 2, neural 99.9 6.2E-25 2.1E-29 212.6 18.3 182 503-730 2-188 (189)
120 4fa8_A Secreted protein BARF1; 99.9 2.2E-25 7.6E-30 217.2 13.6 171 58-269 2-194 (203)
121 2v44_A NCAM2, neural cell adhe 99.9 2.8E-24 9.7E-29 208.1 20.7 179 505-729 4-186 (189)
122 3ojm_B Fibroblast growth facto 99.9 8E-25 2.7E-29 219.3 16.8 199 500-736 12-227 (231)
123 2r15_A Myomesin-1; sarcomeric 99.9 9.6E-24 3.3E-28 208.4 23.7 195 62-277 14-210 (212)
124 1epf_A NCAM, protein (neural c 99.9 1E-23 3.5E-28 204.5 22.6 182 503-729 2-190 (191)
125 1rhf_A Tyrosine-protein kinase 99.9 3E-24 1E-28 206.5 18.5 176 503-729 2-182 (182)
126 2v44_A NCAM2, neural cell adhe 99.9 1.1E-23 3.9E-28 203.8 21.3 178 51-275 4-185 (189)
127 2c5d_C AXL oncogene, tyrosine- 99.9 1.9E-23 6.5E-28 203.3 22.2 178 183-407 2-191 (195)
128 2va4_A NCAM2, N-CAM 2, neural 99.9 4.6E-23 1.6E-27 199.9 24.5 182 183-408 2-192 (192)
129 2iep_A Muscle-specific kinase 99.9 3.3E-24 1.1E-28 208.1 16.4 184 181-410 5-191 (192)
130 2v9r_A Roundabout homolog 1; p 99.9 2E-24 6.9E-29 213.2 14.5 195 502-739 8-211 (212)
131 2vr9_A Roundabout 1, ROBO; imm 99.9 2.5E-24 8.4E-29 213.6 13.6 189 500-731 6-207 (217)
132 1rhf_A Tyrosine-protein kinase 99.9 4.4E-23 1.5E-27 198.2 21.1 173 51-275 4-181 (182)
133 2v5t_A NCAM2, N-CAM 2, neural 99.9 3.6E-23 1.2E-27 200.1 19.8 180 50-277 3-188 (189)
134 1epf_A NCAM, protein (neural c 99.9 1.5E-22 5.1E-27 196.2 24.0 182 183-408 2-190 (191)
135 3k0w_A Mucosa-associated lymph 99.9 4.5E-23 1.5E-27 204.6 18.5 189 501-734 16-206 (218)
136 1f97_A Junction adhesion molec 99.9 1.6E-23 5.6E-28 206.6 15.1 181 504-730 2-207 (212)
137 3bp6_B Programmed cell death 1 99.9 4.3E-23 1.5E-27 202.1 16.4 173 515-731 13-194 (202)
138 2x1w_L Vascular endothelial gr 99.9 2.6E-23 8.9E-28 205.5 15.0 178 515-734 18-211 (213)
139 3s97_C Contactin-1; carbonic a 99.9 1.5E-23 5.1E-28 205.0 12.7 187 504-730 8-201 (201)
140 3b5h_A Cervical EMMPRIN, HAB18 99.9 1.6E-22 5.5E-27 194.7 19.6 165 515-730 9-183 (184)
141 3sgj_C Human FCG3A receptor; r 99.9 9.8E-23 3.3E-27 199.4 17.7 170 503-734 7-178 (204)
142 2c1o_A IGK-C protein; FAB frag 99.9 4.1E-23 1.4E-27 210.3 15.1 206 115-399 11-245 (254)
143 2vr9_A Roundabout 1, ROBO; imm 99.9 9.3E-23 3.2E-27 202.2 17.1 187 181-409 7-206 (217)
144 3p2t_A Leukocyte immunoglobuli 99.9 8.2E-23 2.8E-27 199.0 16.1 184 502-729 4-195 (196)
145 2ifg_A High affinity nerve gro 99.9 1.4E-23 4.8E-28 224.2 11.3 184 501-732 156-347 (347)
146 3grw_A Fibroblast growth facto 99.9 3.8E-22 1.3E-26 201.3 21.0 195 181-414 9-223 (241)
147 2v9r_A Roundabout homolog 1; p 99.9 1.2E-22 4E-27 200.5 16.9 192 181-414 7-207 (212)
148 2c1o_A IGK-C protein; FAB frag 99.9 5E-23 1.7E-27 209.6 14.4 208 18-266 10-244 (254)
149 3ojm_B Fibroblast growth facto 99.9 2.7E-22 9.2E-27 200.8 18.0 194 181-413 13-225 (231)
150 3r4d_A CEA-related cell adhesi 99.9 3.5E-22 1.2E-26 196.5 18.6 173 515-733 10-203 (208)
151 1f2q_A High affinity immunoglo 99.9 1.1E-22 3.7E-27 194.3 14.1 170 502-733 3-174 (176)
152 1fnl_A Low affinity immunoglob 99.9 3.8E-22 1.3E-26 190.3 17.9 167 502-731 6-175 (175)
153 2x1w_L Vascular endothelial gr 99.9 2.1E-22 7.2E-27 198.9 16.6 189 48-279 6-209 (213)
154 3jz7_A MCAR, CAR, coxsackievir 99.9 8.1E-23 2.8E-27 201.9 13.3 174 515-732 11-214 (214)
155 2d3v_A Leukocyte immunoglobuli 99.9 5.6E-23 1.9E-27 200.2 11.8 174 502-719 4-181 (196)
156 1hng_A CD2; T lymphocyte adhes 99.9 7E-23 2.4E-27 195.3 12.2 156 515-728 7-174 (176)
157 1ugn_A LIR1, leukocyte immunog 99.9 4.4E-22 1.5E-26 194.1 17.9 183 502-729 4-197 (198)
158 3k0w_A Mucosa-associated lymph 99.9 9.7E-22 3.3E-26 194.9 20.4 183 49-277 18-202 (218)
159 3s97_C Contactin-1; carbonic a 99.9 1.5E-22 5.2E-27 197.8 14.4 181 54-276 13-200 (201)
160 1vca_A VCAM-D1,2, human vascul 99.9 9.1E-22 3.1E-26 192.2 19.0 174 515-733 12-200 (202)
161 3b5h_A Cervical EMMPRIN, HAB18 99.9 3.4E-21 1.2E-25 185.4 22.7 167 61-277 9-183 (184)
162 2fbo_J V1V2;, variable region- 99.9 1.9E-22 6.5E-27 204.7 13.2 175 515-728 13-250 (250)
163 1f97_A Junction adhesion molec 99.9 6.7E-22 2.3E-26 195.0 16.2 178 184-408 2-206 (212)
164 2ny1_B T-cell surface glycopro 99.9 1.7E-22 5.7E-27 194.6 11.2 160 515-733 6-182 (184)
165 2gi7_A GPVI protein; IG-like d 99.9 8.7E-22 3E-26 189.5 16.1 162 501-719 6-169 (184)
166 3mj8_L Stimulatory hamster ant 99.9 1.1E-21 3.7E-26 193.8 16.9 174 515-725 11-208 (213)
167 1nbq_A JAM, junctional adhesio 99.9 7.5E-23 2.6E-27 201.3 8.2 180 503-727 4-204 (209)
168 2ifg_A High affinity nerve gro 99.9 4E-22 1.4E-26 212.9 13.6 202 23-277 136-345 (347)
169 3bp6_B Programmed cell death 1 99.9 4.2E-21 1.4E-25 187.8 19.5 181 186-410 5-194 (202)
170 3jz7_A MCAR, CAR, coxsackievir 99.9 4.3E-22 1.5E-26 196.6 12.5 178 56-277 7-212 (214)
171 4f80_A Butyrophilin subfamily 99.9 2.9E-21 1E-25 192.7 18.5 173 515-730 15-213 (226)
172 1uct_A Immunoglobulin alpha FC 99.9 6.3E-22 2.2E-26 195.7 13.4 184 501-731 7-199 (218)
173 3sgj_C Human FCG3A receptor; r 99.9 3.3E-21 1.1E-25 188.5 18.1 171 181-412 5-177 (204)
174 3r4d_A CEA-related cell adhesi 99.9 6.1E-21 2.1E-25 187.6 19.5 178 187-410 3-201 (208)
175 3mj8_L Stimulatory hamster ant 99.9 2.9E-21 9.8E-26 190.8 17.1 180 55-271 6-207 (213)
176 3ry4_A Low affinity immunoglob 99.9 2.4E-21 8.2E-26 183.8 15.9 164 503-728 4-169 (170)
177 3p2t_A Leukocyte immunoglobuli 99.9 3.9E-21 1.3E-25 187.1 17.4 174 181-397 3-179 (196)
178 1fnl_A Low affinity immunoglob 99.9 8.1E-21 2.8E-25 181.1 18.9 167 181-409 5-174 (175)
179 1oll_A NK receptor; immune sys 99.9 3.5E-21 1.2E-25 186.0 15.4 180 502-729 3-187 (188)
180 2d3v_A Leukocyte immunoglobuli 99.9 4.9E-21 1.7E-25 186.3 15.7 175 181-398 3-181 (196)
181 3d9a_L Light chain of hyhel10 99.9 7.9E-21 2.7E-25 187.6 17.3 174 515-726 12-209 (213)
182 1jbj_A CD3 epsilon and gamma e 99.9 3.8E-22 1.3E-26 192.2 7.4 162 516-720 11-179 (186)
183 1ugn_A LIR1, leukocyte immunog 99.9 3.6E-21 1.2E-25 187.6 14.3 184 181-408 3-197 (198)
184 2fbo_J V1V2;, variable region- 99.9 4.8E-21 1.7E-25 194.3 15.7 183 53-275 6-250 (250)
185 1f2q_A High affinity immunoglo 99.9 4.7E-21 1.6E-25 182.9 14.7 167 50-279 5-173 (176)
186 1hng_A CD2; T lymphocyte adhes 99.9 2.6E-21 9E-26 184.4 12.6 156 61-275 7-174 (176)
187 3nl4_L Antigen binding fragmen 99.8 1.3E-20 4.4E-25 186.1 17.4 167 504-714 2-198 (213)
188 4frw_A Poliovirus receptor-rel 99.8 3.4E-21 1.2E-25 190.5 13.3 175 515-729 10-210 (218)
189 3sbw_C Programmed cell death 1 99.8 1.2E-20 4.1E-25 187.6 16.9 179 515-735 12-216 (222)
190 2gi7_A GPVI protein; IG-like d 99.8 5.1E-21 1.7E-25 184.1 13.1 156 52-265 11-168 (184)
191 2ny1_B T-cell surface glycopro 99.8 6.6E-21 2.2E-25 183.4 13.8 159 61-279 6-181 (184)
192 3s96_B 3B5H10 FAB light chain; 99.8 1.5E-20 5.2E-25 186.3 16.8 173 515-724 11-214 (218)
193 1nqb_A Single-chain antibody f 99.8 4.8E-20 1.7E-24 187.4 20.5 184 53-277 4-233 (256)
194 1f3r_B FV antibody fragment; I 99.8 8.4E-21 2.9E-25 193.4 14.9 192 515-732 11-247 (257)
195 1uct_A Immunoglobulin alpha FC 99.8 1E-20 3.5E-25 187.0 14.9 180 50-277 10-198 (218)
196 1lk3_L 9D7 light chain; antige 99.8 3.3E-20 1.1E-24 182.7 18.4 171 515-723 11-205 (210)
197 3d9a_L Light chain of hyhel10 99.8 7.8E-21 2.7E-25 187.6 13.8 177 53-268 5-204 (213)
198 4f80_A Butyrophilin subfamily 99.8 4.2E-20 1.4E-24 184.2 19.3 180 189-409 10-213 (226)
199 3tv3_L PGT128 light chain, IG 99.8 1.5E-20 5.2E-25 185.3 15.8 179 54-271 5-205 (211)
200 1lk3_L 9D7 light chain; antige 99.8 1.2E-20 4.1E-25 185.8 15.0 173 55-266 6-201 (210)
201 1f3r_B FV antibody fragment; I 99.8 1.5E-20 5E-25 191.6 15.8 199 53-277 4-245 (257)
202 2ghw_B Anti-SARS SCFV antibody 99.8 7.4E-20 2.5E-24 185.2 20.8 196 53-276 6-241 (247)
203 3tv3_L PGT128 light chain, IG 99.8 2E-20 6.8E-25 184.4 16.2 172 515-725 11-206 (211)
204 1vca_A VCAM-D1,2, human vascul 99.8 5.6E-20 1.9E-24 179.4 19.2 181 186-411 3-199 (202)
205 1nbq_A JAM, junctional adhesio 99.8 3.3E-21 1.1E-25 189.6 9.6 180 182-405 3-203 (209)
206 1oll_A NK receptor; immune sys 99.8 4E-20 1.4E-24 178.5 17.0 168 182-396 3-172 (188)
207 3ry4_A Low affinity immunoglob 99.8 3.5E-20 1.2E-24 175.7 16.2 162 51-275 6-169 (170)
208 2pet_A Lutheran blood group gl 99.8 1.2E-20 4.3E-25 188.7 13.8 174 515-728 11-229 (231)
209 2v5y_A Receptor-type tyrosine- 99.8 5.2E-18 1.8E-22 199.9 38.4 253 63-407 89-352 (731)
210 4i0k_A CD276 antigen; immunogl 99.8 4.7E-21 1.6E-25 190.5 10.0 183 515-736 6-212 (222)
211 3s96_B 3B5H10 FAB light chain; 99.8 4.2E-20 1.4E-24 183.1 16.7 177 56-270 7-213 (218)
212 3nl4_L Antigen binding fragmen 99.8 3.6E-20 1.2E-24 182.9 16.1 170 53-261 5-198 (213)
213 1q0x_L FAB 9B1, light chain; a 99.8 6.6E-20 2.3E-24 180.8 17.7 176 56-269 7-207 (212)
214 3auv_A SC-DSFV derived from th 99.8 8.9E-20 3.1E-24 187.8 19.1 201 503-732 12-256 (276)
215 4frw_A Poliovirus receptor-rel 99.8 3.3E-20 1.1E-24 183.4 15.0 185 53-277 3-211 (218)
216 1nkr_A P58-CL42 KIR; inhibitor 99.8 8.9E-20 3E-24 178.2 17.8 171 502-717 7-184 (201)
217 1nqb_A Single-chain antibody f 99.8 1.2E-19 4.1E-24 184.5 19.3 176 515-731 11-234 (256)
218 1q0x_L FAB 9B1, light chain; a 99.8 7.9E-20 2.7E-24 180.2 17.3 173 515-724 11-209 (212)
219 1hnf_A CD2; T lymphocyte adhes 99.8 3E-20 1E-24 177.2 13.6 157 515-729 10-180 (182)
220 1dr9_A B7-1 (CD80), T lymphocy 99.8 3E-20 1E-24 181.6 13.7 172 515-726 5-197 (201)
221 1b6u_A KIR2DL3, P58 killer cel 99.8 3.5E-20 1.2E-24 187.4 14.6 216 54-355 12-240 (257)
222 1c1e_H Catalytic antibody 1E9 99.8 5.1E-20 1.8E-24 182.6 15.4 184 53-273 4-216 (219)
223 2if7_A SLAM family member 6; N 99.8 1.3E-19 4.4E-24 175.6 17.9 157 515-725 9-187 (193)
224 3sbw_C Programmed cell death 1 99.8 1.1E-19 3.8E-24 180.6 17.1 181 56-278 8-212 (222)
225 2pet_A Lutheran blood group gl 99.8 4.1E-20 1.4E-24 184.9 14.1 181 53-275 4-229 (231)
226 3uzq_A Anti-dengue MAB 4E11; d 99.8 1.6E-19 5.6E-24 183.4 18.2 201 52-278 4-245 (253)
227 3juy_B 3B3 single chain varian 99.8 2.3E-19 8E-24 182.6 19.2 201 49-275 6-255 (256)
228 1nkr_A P58-CL42 KIR; inhibitor 99.8 2.6E-19 8.7E-24 174.9 18.2 167 52-264 11-184 (201)
229 3r06_A Anti-mouse CD3epsilon a 99.8 2.4E-19 8.2E-24 176.9 17.9 178 505-721 3-204 (213)
230 1moe_A Anti-CEA MAB T84.66; an 99.8 1.9E-19 6.6E-24 181.3 17.5 175 506-716 4-220 (240)
231 2if7_A SLAM family member 6; N 99.8 2.3E-19 8E-24 173.8 17.4 162 55-270 4-185 (193)
232 3sob_L Antibody light chain; b 99.8 3.2E-19 1.1E-23 179.2 18.7 184 504-726 25-232 (237)
233 1qok_A MFE-23 recombinant anti 99.8 4.8E-19 1.6E-23 182.9 20.6 198 53-277 30-268 (282)
234 3umt_A SCFV heavy chain and li 99.8 2.5E-19 8.5E-24 182.4 18.1 201 53-278 6-246 (256)
235 1c1e_H Catalytic antibody 1E9 99.8 7.5E-20 2.6E-24 181.4 13.9 175 515-727 11-217 (219)
236 3auv_A SC-DSFV derived from th 99.8 3.9E-19 1.3E-23 183.0 19.7 198 51-277 14-254 (276)
237 2xzc_L FAB A.17 light chain; i 99.8 1E-19 3.4E-24 180.1 14.7 177 54-268 5-206 (216)
238 3mtr_A N-CAM-1, NCAM-1, neural 99.8 6.6E-20 2.3E-24 181.3 13.3 188 502-732 18-211 (215)
239 3r06_A Anti-mouse CD3epsilon a 99.8 1.4E-19 4.8E-24 178.6 15.6 176 53-266 5-202 (213)
240 1moe_A Anti-CEA MAB T84.66; an 99.8 2.8E-19 9.5E-24 180.1 18.0 173 53-262 5-219 (240)
241 1jbj_A CD3 epsilon and gamma e 99.8 2.1E-20 7.3E-25 179.9 9.0 162 61-267 10-179 (186)
242 1sy6_A T-cell surface glycopro 99.8 1.3E-20 4.6E-25 184.1 7.6 185 515-728 14-202 (204)
243 2ghw_B Anti-SARS SCFV antibody 99.8 8.8E-19 3E-23 177.3 21.3 194 189-408 8-241 (247)
244 2p1y_A Bispecific alpha/beta T 99.8 2.8E-19 9.4E-24 179.9 17.3 180 53-264 4-222 (238)
245 1b6u_A KIR2DL3, P58 killer cel 99.8 9.3E-20 3.2E-24 184.3 13.8 172 181-396 5-183 (257)
246 1p6f_A NKP46, natural cytotoxi 99.8 2.6E-19 9E-24 179.6 16.8 183 502-732 6-193 (242)
247 3gkz_A Anti-methamphetamine si 99.8 1.4E-18 4.8E-23 176.9 22.0 201 50-277 9-249 (257)
248 2xzc_L FAB A.17 light chain; i 99.8 3.7E-19 1.3E-23 176.0 17.0 173 515-724 11-209 (216)
249 1mq8_A ICAM-1, intercellular a 99.8 1E-19 3.6E-24 185.8 13.2 170 515-732 97-284 (291)
250 1nfd_E H57 FAB; complex (immun 99.8 1.8E-20 6.3E-25 184.8 7.3 174 55-266 5-201 (212)
251 1dr9_A B7-1 (CD80), T lymphocy 99.8 3.8E-19 1.3E-23 173.7 16.6 171 61-272 5-196 (201)
252 3esu_F Antibody 14B7* light ch 99.8 4E-19 1.4E-23 180.2 17.3 187 506-715 7-231 (250)
253 3mj6_A Junctional adhesion mol 99.8 8.9E-20 3.1E-24 187.1 12.6 185 505-732 7-239 (268)
254 3mj6_A Junctional adhesion mol 99.8 1.1E-19 3.6E-24 186.5 13.0 181 53-277 9-237 (268)
255 3uzq_A Anti-dengue MAB 4E11; d 99.8 4.3E-19 1.5E-23 180.3 17.4 199 509-734 7-248 (253)
256 3juy_B 3B3 single chain varian 99.8 1.2E-18 4.3E-23 177.2 20.7 193 181-397 4-244 (256)
257 1mq8_A ICAM-1, intercellular a 99.8 2.2E-19 7.6E-24 183.3 15.1 261 187-600 3-284 (291)
258 2zg1_A Sialic acid-binding IG- 99.8 2.3E-19 8E-24 177.1 14.7 169 515-728 11-213 (214)
259 1hnf_A CD2; T lymphocyte adhes 99.8 2.9E-19 9.9E-24 170.3 14.7 161 55-275 5-179 (182)
260 4i0k_A CD276 antigen; immunogl 99.8 7.2E-20 2.5E-24 182.0 11.0 183 58-279 4-208 (222)
261 3d9a_H Heavy chain of hyhel10 99.8 1.9E-19 6.6E-24 177.2 13.9 180 53-270 4-207 (210)
262 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 3.2E-19 1.1E-23 177.3 15.4 184 53-273 4-219 (222)
263 3esu_F Antibody 14B7* light ch 99.8 7.3E-19 2.5E-23 178.2 18.3 187 52-262 7-231 (250)
264 3umt_A SCFV heavy chain and li 99.8 6.5E-19 2.2E-23 179.3 17.8 194 515-733 13-248 (256)
265 3sob_L Antibody light chain; b 99.8 2E-19 6.9E-24 180.7 13.7 178 53-269 28-228 (237)
266 3nl4_H Antigen binding fragmen 99.8 6.1E-19 2.1E-23 174.3 16.7 186 53-274 3-211 (215)
267 1qok_A MFE-23 recombinant anti 99.8 7.4E-19 2.5E-23 181.5 17.9 189 515-730 37-268 (282)
268 3qib_D 2B4 beta chain; IG doma 99.8 2E-19 6.8E-24 184.7 13.5 171 515-720 38-245 (270)
269 1nfd_E H57 FAB; complex (immun 99.8 2.1E-20 7.1E-25 184.5 5.9 170 515-721 10-203 (212)
270 2znx_A SCFV; fluorotryptohpan, 99.8 7.5E-19 2.6E-23 177.1 17.3 186 506-720 4-228 (242)
271 2j6e_L IGM, FAB light chain; a 99.8 8.7E-20 3E-24 183.0 10.1 178 55-269 25-227 (234)
272 3knb_B Obscurin-like protein 1 99.8 2.3E-19 7.9E-24 154.5 11.3 96 634-732 12-107 (107)
273 3bkj_L WO2 IGG2A FAB fragment 99.8 7.7E-19 2.6E-23 178.3 17.1 179 503-720 34-241 (252)
274 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 1.1E-18 3.9E-23 177.4 18.2 202 52-277 6-248 (256)
275 4fmk_A Poliovirus receptor-rel 99.8 2E-19 6.9E-24 178.7 12.3 174 515-728 12-215 (225)
276 1svz_A Immunoglobulin;, single 99.8 1.4E-18 4.8E-23 175.7 18.7 181 53-263 5-228 (247)
277 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 4.1E-19 1.4E-23 176.5 14.4 174 515-727 11-220 (222)
278 2zg1_A Sialic acid-binding IG- 99.8 7.5E-19 2.6E-23 173.5 16.0 179 52-275 3-211 (214)
279 2znx_A SCFV; fluorotryptohpan, 99.8 1.7E-18 5.7E-23 174.5 18.7 182 52-263 4-222 (242)
280 3pv7_A B7-H6, IG-like domain-c 99.8 1.3E-18 4.6E-23 176.0 18.0 172 515-728 14-224 (248)
281 3ux9_B SCFV antibody; five hel 99.8 1.6E-18 5.5E-23 176.3 18.6 190 53-263 6-235 (256)
282 1ccz_A Protein (CD58); LFA-3, 99.8 1.4E-19 4.8E-24 171.2 9.8 152 515-728 6-169 (171)
283 3ux9_B SCFV antibody; five hel 99.8 2E-18 6.7E-23 175.7 18.9 182 515-717 13-236 (256)
284 4dzb_B Vbeta2 (MAIT T cell rec 99.8 9.5E-19 3.3E-23 176.9 16.4 173 515-721 12-222 (246)
285 1p6f_A NKP46, natural cytotoxi 99.8 1.9E-18 6.5E-23 173.3 18.4 184 181-411 5-193 (242)
286 3gkz_A Anti-methamphetamine si 99.8 7.5E-18 2.6E-22 171.5 23.1 204 182-410 7-250 (257)
287 3bkj_L WO2 IGG2A FAB fragment 99.8 3.8E-19 1.3E-23 180.5 13.3 175 53-266 38-240 (252)
288 4fmk_A Poliovirus receptor-rel 99.8 4.1E-19 1.4E-23 176.4 13.2 183 53-275 5-215 (225)
289 1svz_A Immunoglobulin;, single 99.8 1.5E-18 5.1E-23 175.6 17.5 181 507-716 5-228 (247)
290 2p1y_A Bispecific alpha/beta T 99.8 1.8E-18 6.3E-23 173.8 18.0 181 186-396 3-222 (238)
291 2fbj_H IGA-kappa J539 FAB (hea 99.8 2.1E-18 7.1E-23 171.0 17.6 178 53-268 4-212 (220)
292 1sy6_A T-cell surface glycopro 99.8 1.9E-19 6.4E-24 176.0 9.7 189 58-275 11-202 (204)
293 2j6e_L IGM, FAB light chain; a 99.8 2E-19 6.8E-24 180.4 10.0 173 515-724 30-229 (234)
294 1dee_B IGM RF 2A2; FAB-IBP com 99.8 7.2E-18 2.4E-22 167.5 20.9 183 53-271 4-221 (223)
295 2gjj_A A21 single-chain antibo 99.8 2.8E-18 9.5E-23 175.2 18.2 190 504-716 6-239 (264)
296 3eow_R Poliovirus receptor; im 99.8 1.9E-19 6.5E-24 178.8 8.9 181 53-275 3-210 (221)
297 3d9a_H Heavy chain of hyhel10 99.8 5.2E-19 1.8E-23 174.0 11.8 171 515-724 11-208 (210)
298 1mju_H Immunoglobulin MS6-12; 99.8 2.3E-18 7.9E-23 171.5 16.1 185 53-278 4-218 (227)
299 3eow_R Poliovirus receptor; im 99.8 1.4E-19 4.9E-24 179.7 7.1 175 515-729 10-211 (221)
300 1pz5_B Heavy chain of FAB (SYA 99.8 3.7E-18 1.3E-22 169.3 17.0 180 53-271 4-215 (220)
301 2dru_A Chimera of CD48 antigen 99.8 1E-18 3.5E-23 166.8 12.4 153 515-727 10-178 (180)
302 2gki_A Nuclease; anti-DNA anti 99.8 6E-18 2.1E-22 175.4 19.2 199 53-278 26-273 (291)
303 4dzb_B Vbeta2 (MAIT T cell rec 99.8 1.4E-18 4.8E-23 175.6 13.5 179 53-266 5-220 (246)
304 2fbj_H IGA-kappa J539 FAB (hea 99.8 7.5E-18 2.6E-22 167.0 18.5 169 515-721 11-212 (220)
305 1op3_H FAB 2G12, heavy chain; 99.8 2.5E-18 8.4E-23 171.2 14.6 176 53-267 4-215 (225)
306 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.8 1.2E-17 4.2E-22 169.7 20.1 205 184-410 4-249 (256)
307 3qib_D 2B4 beta chain; IG doma 99.8 2.7E-18 9.1E-23 176.2 14.8 204 19-265 3-243 (270)
308 2vol_A Murine IGG FC; FC, zinc 99.8 3.7E-18 1.3E-22 167.4 15.1 179 52-265 5-196 (207)
309 1mju_H Immunoglobulin MS6-12; 99.8 2.7E-18 9.4E-23 171.0 14.1 180 515-734 11-221 (227)
310 1pz5_B Heavy chain of FAB (SYA 99.8 4.6E-18 1.6E-22 168.6 15.4 169 515-726 11-217 (220)
311 1dee_B IGM RF 2A2; FAB-IBP com 99.8 2E-17 6.9E-22 164.2 19.8 168 515-724 11-221 (223)
312 2gjj_A A21 single-chain antibo 99.8 9.5E-18 3.3E-22 171.2 17.8 188 52-263 8-239 (264)
313 3bae_H WO2 IGG2A FAB fragment 99.8 6.1E-18 2.1E-22 168.7 16.0 180 53-271 4-220 (228)
314 3shs_A HOC head outer capsid p 99.8 1.8E-16 6.3E-21 152.3 25.3 239 55-393 8-278 (304)
315 2v5y_A Receptor-type tyrosine- 99.8 1.5E-16 5E-21 187.5 30.4 352 196-734 89-461 (731)
316 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.8E-17 6.3E-22 169.7 19.8 178 52-263 18-254 (268)
317 1op3_H FAB 2G12, heavy chain; 99.8 5.2E-18 1.8E-22 168.8 15.3 166 515-723 11-218 (225)
318 3m8o_H Immunoglobulin A1 heavy 99.8 1.8E-17 6.1E-22 164.5 19.1 176 53-266 4-212 (221)
319 1x9q_A SCFV, 4M5.3 anti-fluore 99.8 1.1E-17 3.6E-22 171.5 17.9 190 503-716 15-254 (268)
320 1ccz_A Protein (CD58); LFA-3, 99.8 2.2E-18 7.5E-23 163.0 11.5 151 61-274 6-168 (171)
321 3pv7_A B7-H6, IG-like domain-c 99.8 2.9E-18 1E-22 173.5 13.2 181 52-275 6-224 (248)
322 1dn0_B IGM-kappa cold agglutin 99.8 2.4E-17 8.2E-22 164.7 19.3 188 53-276 4-226 (232)
323 3bqu_C 3H6 FAB light chain; be 99.8 4.1E-19 1.4E-23 178.0 6.3 178 503-719 23-224 (233)
324 2vol_A Murine IGG FC; FC, zinc 99.8 1.6E-18 5.6E-23 170.0 10.4 179 504-719 3-197 (207)
325 3knb_B Obscurin-like protein 1 99.8 3.9E-18 1.3E-22 146.8 11.2 97 500-599 10-106 (107)
326 3bqu_C 3H6 FAB light chain; be 99.8 2.3E-19 7.8E-24 179.8 3.9 174 53-265 27-223 (233)
327 1gsm_A Madcam-1, mucosal addre 99.7 1.2E-16 4.1E-21 153.7 22.5 163 515-726 18-201 (210)
328 3fku_X Neutralizing antibody F 99.7 7.5E-18 2.6E-22 173.6 15.1 195 55-277 6-250 (280)
329 3knb_A Titin; IG-like, titin, 99.7 4E-18 1.4E-22 144.8 10.7 93 635-730 5-99 (100)
330 2dru_A Chimera of CD48 antigen 99.7 6E-18 2.1E-22 161.4 13.0 156 57-273 7-177 (180)
331 3liz_H 4C3 monoclonal antibody 99.7 1.4E-17 4.8E-22 168.9 16.2 187 53-276 4-219 (253)
332 2rgs_A I, IG gamma-2B heavy ch 99.7 3.1E-18 1.1E-22 169.5 10.7 180 503-719 9-205 (218)
333 3mtr_A N-CAM-1, NCAM-1, neural 99.7 1.2E-17 4.2E-22 164.9 14.9 185 50-277 19-209 (215)
334 3shs_A HOC head outer capsid p 99.7 4.5E-16 1.5E-20 149.6 24.8 167 184-407 3-181 (304)
335 4ei6_B Vbeta16 XV19 type II na 99.7 2.5E-17 8.4E-22 166.3 17.0 180 505-720 4-220 (245)
336 3nfj_J T cell receptor beta ch 99.7 3.4E-17 1.2E-21 165.3 17.9 173 515-721 12-221 (245)
337 3q5y_A TCR N15 beta; IG, T cel 99.7 2.3E-17 7.7E-22 166.0 16.2 177 507-719 6-213 (240)
338 2rgs_A I, IG gamma-2B heavy ch 99.7 4E-18 1.4E-22 168.6 10.3 177 54-265 14-204 (218)
339 1c5d_H Monoclonal antibody aga 99.7 2E-17 7E-22 163.2 15.2 180 53-270 4-209 (215)
340 3fku_X Neutralizing antibody F 99.7 1.3E-17 4.3E-22 172.0 14.1 190 515-731 11-251 (280)
341 3bae_H WO2 IGG2A FAB fragment 99.7 1.1E-17 3.7E-22 166.8 13.2 174 515-726 11-222 (228)
342 3m8o_H Immunoglobulin A1 heavy 99.7 5.2E-17 1.8E-21 161.1 17.9 164 515-721 11-214 (221)
343 1dn0_B IGM-kappa cold agglutin 99.7 5.5E-17 1.9E-21 162.1 18.1 178 515-729 11-226 (232)
344 2gki_A Nuclease; anti-DNA anti 99.7 9.4E-17 3.2E-21 166.4 20.5 198 188-410 27-273 (291)
345 3pl6_D MBP peptide / T-cell re 99.7 1.9E-17 6.6E-22 169.6 14.9 175 504-719 27-241 (268)
346 3nfj_J T cell receptor beta ch 99.7 1.9E-17 6.6E-22 167.1 14.0 179 53-266 5-219 (245)
347 4ei6_B Vbeta16 XV19 type II na 99.7 2.2E-17 7.5E-22 166.7 14.2 176 53-265 6-218 (245)
348 3nl4_H Antigen binding fragmen 99.7 3.1E-17 1.1E-21 161.9 14.7 185 188-406 4-211 (215)
349 2xqy_G A13-D6.3 monoclonal ant 99.7 6.4E-17 2.2E-21 164.4 17.2 175 53-266 10-214 (261)
350 3q5y_A TCR N15 beta; IG, T cel 99.7 4.1E-17 1.4E-21 164.1 15.5 176 53-265 6-212 (240)
351 2wbj_D OB TCR; transmembrane, 99.7 1.1E-16 3.8E-21 164.9 18.6 184 503-721 24-247 (279)
352 3bn9_D E2 FAB heavy chain; ant 99.7 1.7E-17 5.8E-22 167.9 11.9 177 53-268 4-221 (257)
353 3pl6_D MBP peptide / T-cell re 99.7 4.4E-17 1.5E-21 166.9 15.0 178 52-265 29-240 (268)
354 3omz_A Human vdelta1 gamma del 99.7 2.3E-17 7.9E-22 168.1 12.6 185 53-262 6-230 (259)
355 3omz_A Human vdelta1 gamma del 99.7 3.9E-17 1.3E-21 166.4 14.2 189 183-395 2-231 (259)
356 1hxm_B Gamma-delta T-cell rece 99.7 6.2E-17 2.1E-21 162.9 15.3 179 515-728 12-227 (242)
357 3knb_A Titin; IG-like, titin, 99.7 4.9E-17 1.7E-21 138.0 11.4 95 501-598 3-99 (100)
358 2w59_A IGY FCU3-4; immunoglobu 99.7 3.1E-17 1.1E-21 163.7 11.8 178 52-265 16-216 (231)
359 1gsm_A Madcam-1, mucosal addre 99.7 1E-15 3.4E-20 147.3 21.3 164 54-264 11-192 (210)
360 2w59_A IGY FCU3-4; immunoglobu 99.7 2.3E-17 7.9E-22 164.7 10.2 179 503-719 12-217 (231)
361 1hxm_B Gamma-delta T-cell rece 99.7 1.5E-16 5.1E-21 160.1 16.0 188 53-275 5-227 (242)
362 3tv3_H PGT128 heavy chain, IG 99.7 2E-16 6.8E-21 158.8 16.3 187 53-275 4-235 (239)
363 3qp3_A Titin; I-SET IG-like, s 99.7 1.3E-16 4.3E-21 136.9 12.8 96 634-732 7-102 (103)
364 3qhz_H Human monoclonal antibo 99.7 2.8E-16 9.7E-21 157.0 16.8 187 53-275 4-227 (232)
365 2xqy_G A13-D6.3 monoclonal ant 99.7 2.1E-16 7.1E-21 160.6 15.4 172 515-724 17-219 (261)
366 1c5d_H Monoclonal antibody aga 99.7 9.8E-17 3.4E-21 158.3 12.5 173 515-726 11-212 (215)
367 2wbj_D OB TCR; transmembrane, 99.7 2.9E-16 1E-20 161.7 16.6 179 52-266 27-245 (279)
368 3liz_H 4C3 monoclonal antibody 99.7 2.2E-16 7.7E-21 160.0 15.4 174 515-729 11-219 (253)
369 1bec_A 14.3.D T cell antigen r 99.7 4.5E-16 1.5E-20 156.2 17.1 169 515-718 10-211 (238)
370 1l6x_A Immunoglobulin gamma-1 99.7 1.5E-16 5E-21 156.0 12.5 176 55-265 7-196 (207)
371 4acp_A IG gamma-1 chain C regi 99.7 2.2E-16 7.5E-21 157.6 13.7 202 25-264 1-216 (240)
372 1l6x_A Immunoglobulin gamma-1 99.7 6.6E-17 2.3E-21 158.5 9.3 177 505-719 4-197 (207)
373 2cqv_A MLCK, myosin light chai 99.7 3E-16 1E-20 137.3 12.4 100 634-736 6-105 (114)
374 3bn9_D E2 FAB heavy chain; ant 99.7 1.3E-16 4.6E-21 161.3 11.6 167 515-724 11-224 (257)
375 1i1c_A IGG2A, IG gamma-2A chai 99.7 6.3E-17 2.1E-21 162.1 8.3 180 502-719 15-211 (239)
376 3u2s_H PG9 heavy chain; greek 99.7 8E-16 2.7E-20 155.0 16.5 186 53-275 3-236 (248)
377 1g1c_A Immunoglobulin-like dom 99.7 5.3E-16 1.8E-20 131.9 12.5 95 634-731 4-99 (99)
378 1i1c_A IGG2A, IG gamma-2A chai 99.7 1.9E-16 6.6E-21 158.5 11.0 176 55-265 21-210 (239)
379 1bec_A 14.3.D T cell antigen r 99.7 1.5E-15 5.3E-20 152.3 17.2 175 53-264 3-210 (238)
380 2e7c_A Myosin-binding protein 99.7 6.4E-16 2.2E-20 136.1 12.3 99 632-733 18-118 (118)
381 3n9g_H FAB fragment of MAB CR4 99.7 3.5E-15 1.2E-19 148.8 18.9 185 53-276 4-224 (230)
382 3o3u_N Maltose-binding peripla 99.6 2.4E-16 8.2E-21 180.8 11.5 164 515-720 377-567 (581)
383 1waa_A Titin; metal binding pr 99.6 8.5E-16 2.9E-20 128.2 11.7 88 635-730 5-92 (93)
384 3to4_D NKT vbeta2 (mouse varia 99.6 4.6E-16 1.6E-20 157.7 12.0 168 515-717 12-217 (253)
385 4acp_A IG gamma-1 chain C regi 99.6 2.3E-16 7.8E-21 157.5 9.4 180 182-396 22-216 (240)
386 3puc_A Titin; I-SET IG-like do 99.6 1.2E-15 4.2E-20 129.6 12.5 93 635-730 6-98 (99)
387 3to4_D NKT vbeta2 (mouse varia 99.6 3E-16 1E-20 159.1 10.2 173 54-263 6-216 (253)
388 3irg_B Obscurin-like protein 1 99.6 9E-16 3.1E-20 132.6 11.3 95 635-732 13-107 (107)
389 2yuz_A Myosin-binding protein 99.6 3.7E-16 1.3E-20 132.6 8.6 92 635-733 7-98 (100)
390 1oga_E TRBC1, T-cell receptor 99.6 6E-16 2.1E-20 156.7 11.4 177 52-265 6-217 (252)
391 1oga_E TRBC1, T-cell receptor 99.6 1.8E-15 6.3E-20 153.1 14.9 171 515-720 14-219 (252)
392 2kkq_A Myotilin; unknown funct 99.6 2.5E-15 8.4E-20 131.7 13.0 100 632-734 12-113 (116)
393 1he7_A High affinity nerve gro 99.6 2.2E-15 7.4E-20 131.3 12.5 85 648-734 12-103 (126)
394 3iu4_H CHP3 FAB heavy chain; a 99.6 2.2E-15 7.4E-20 153.2 14.4 183 53-274 4-221 (263)
395 3mlr_H Human monoclonal anti-H 99.6 5.9E-15 2E-19 146.6 16.6 182 53-272 4-221 (226)
396 1ypz_F T-cell receptor gamma c 99.6 1.6E-15 5.3E-20 151.3 12.1 182 53-266 5-216 (230)
397 3qp3_A Titin; I-SET IG-like, s 99.6 3.4E-15 1.2E-19 127.9 12.4 96 501-599 6-101 (103)
398 2kdg_A Myotilin; immonoglobuli 99.6 1.5E-15 5.1E-20 129.4 10.1 95 635-732 5-100 (100)
399 2bk8_A Connectin, M1, titin he 99.6 5.9E-15 2E-19 124.8 13.7 84 645-730 10-94 (97)
400 1wit_A Twitchin 18TH IGSF modu 99.6 1.6E-15 5.4E-20 127.2 9.7 90 635-729 2-93 (93)
401 1u2h_A APEG-1, aortic preferen 99.6 2E-15 6.8E-20 128.3 10.4 93 635-730 5-98 (99)
402 3sob_H Antibody heavy chain, l 99.6 8.5E-15 2.9E-19 148.6 16.9 185 53-276 27-250 (256)
403 2lu7_A Obscurin-like protein 1 99.6 7.7E-16 2.6E-20 125.4 7.3 79 646-731 6-84 (84)
404 1ypz_F T-cell receptor gamma c 99.6 1.1E-15 3.9E-20 152.3 10.1 172 515-720 12-217 (230)
405 2lvc_A Obscurin-like protein 1 99.6 8.2E-16 2.8E-20 127.4 7.5 75 647-728 17-91 (91)
406 2cqv_A MLCK, myosin light chai 99.6 5.6E-15 1.9E-19 129.1 13.1 97 502-601 6-102 (114)
407 3qhz_H Human monoclonal antibo 99.6 7.1E-15 2.4E-19 146.8 15.4 172 515-729 11-228 (232)
408 3tv3_H PGT128 heavy chain, IG 99.6 1E-14 3.4E-19 146.3 16.2 184 189-407 6-235 (239)
409 1ypz_E T cell receptor delta, 99.6 1.3E-14 4.4E-19 141.9 16.2 169 53-268 5-200 (207)
410 1ow0_A IG alpha-1 chain C regi 99.6 2.6E-16 8.8E-21 155.1 4.0 174 506-719 7-200 (214)
411 1wwb_X Protein (brain derived 99.6 3.6E-15 1.2E-19 127.5 10.7 85 648-734 13-102 (103)
412 2dm2_A Palladin; beta-sandwich 99.6 2.5E-15 8.4E-20 130.5 9.2 97 635-734 8-106 (110)
413 3o3u_N Maltose-binding peripla 99.6 2.9E-15 1E-19 171.7 12.2 164 61-266 377-566 (581)
414 1g1c_A Immunoglobulin-like dom 99.6 1.2E-14 3.9E-19 123.5 12.5 94 502-598 4-98 (99)
415 3puc_A Titin; I-SET IG-like do 99.6 1.2E-14 4.2E-19 123.3 12.3 95 501-598 4-98 (99)
416 1nct_A Titin; cell adhesion, g 99.6 1.2E-15 4E-20 131.3 6.0 94 633-729 12-105 (106)
417 1waa_A Titin; metal binding pr 99.6 1.2E-14 4.1E-19 121.2 11.9 90 181-277 3-92 (93)
418 2yuz_A Myosin-binding protein 99.6 4.4E-15 1.5E-19 125.9 9.3 92 502-600 6-97 (100)
419 3u2s_H PG9 heavy chain; greek 99.6 1.3E-14 4.4E-19 146.1 14.2 186 188-408 4-237 (248)
420 2aty_A Complement receptor chi 99.6 1.5E-14 5.2E-19 155.4 15.5 170 62-265 180-361 (376)
421 2yuv_A Myosin-binding protein 99.6 1.2E-14 4.2E-19 123.5 11.8 92 635-733 7-98 (100)
422 1wit_A Twitchin 18TH IGSF modu 99.6 1.2E-14 4.1E-19 121.8 11.4 90 503-597 2-93 (93)
423 1fhg_A Telokin; immunoglobulin 99.6 1.3E-14 4.3E-19 134.5 12.5 99 634-735 40-139 (154)
424 3irg_B Obscurin-like protein 1 99.6 1.1E-14 3.8E-19 125.6 11.2 97 500-599 10-106 (107)
425 3n9g_H FAB fragment of MAB CR4 99.6 3.8E-14 1.3E-18 141.2 16.6 173 515-730 11-225 (230)
426 1gxe_A Myosin binding protein 99.6 4.4E-15 1.5E-19 133.6 8.8 84 644-729 26-138 (139)
427 3irg_A Titin; IG-like, titin, 99.6 1.4E-14 5E-19 123.1 11.3 92 636-730 6-99 (100)
428 2aty_A Complement receptor chi 99.6 3.2E-14 1.1E-18 152.9 15.8 179 503-718 167-361 (376)
429 2e7c_A Myosin-binding protein 99.5 3.3E-14 1.1E-18 125.1 12.4 98 500-600 18-117 (118)
430 2edj_A Roundabout homolog 2; K 99.5 8.3E-15 2.9E-19 124.6 8.2 93 634-732 7-100 (100)
431 2lu7_A Obscurin-like protein 1 99.5 1.3E-14 4.5E-19 118.0 8.8 80 56-143 3-82 (84)
432 2e6q_A Obscurin-like protein 1 99.5 3.3E-14 1.1E-18 121.8 11.7 93 635-735 8-110 (112)
433 1x44_A Myosin-binding protein 99.5 2E-14 6.9E-19 123.0 10.3 88 638-733 10-99 (103)
434 1ow0_A IG alpha-1 chain C regi 99.5 2E-15 6.8E-20 148.7 4.5 174 52-265 7-199 (214)
435 2dm3_A KIAA0992 protein, palla 99.5 5.5E-15 1.9E-19 128.3 6.7 99 634-735 8-107 (110)
436 2lvc_A Obscurin-like protein 1 99.5 1.3E-14 4.4E-19 120.2 8.5 88 502-596 3-91 (91)
437 3kvq_A Vascular endothelial gr 99.5 5.6E-15 1.9E-19 127.8 6.5 95 635-734 10-104 (108)
438 2dav_A SLOW MYBP-C, myosin-bin 99.5 2.1E-14 7.4E-19 125.2 10.2 95 636-733 8-115 (126)
439 1u2h_A APEG-1, aortic preferen 99.5 4.4E-14 1.5E-18 119.9 11.7 95 181-277 3-98 (99)
440 2kkq_A Myotilin; unknown funct 99.5 4.6E-14 1.6E-18 123.5 12.1 99 500-601 12-112 (116)
441 2e6p_A Obscurin-like protein 1 99.5 1.8E-14 6E-19 123.6 9.1 93 635-734 7-101 (104)
442 2kdg_A Myotilin; immonoglobuli 99.5 3.2E-14 1.1E-18 121.0 10.7 95 502-599 4-99 (100)
443 2edh_A Obscurin; structural ge 99.5 2.1E-14 7.3E-19 125.2 9.7 91 636-735 20-110 (113)
444 2bk8_A Connectin, M1, titin he 99.5 1E-13 3.5E-18 117.1 13.5 89 507-598 5-94 (97)
445 1ypz_E T cell receptor delta, 99.5 9E-14 3.1E-18 135.8 14.8 169 186-399 4-199 (207)
446 2eny_A Obscurin; beta-sandwich 99.5 1.3E-14 4.4E-19 124.2 7.5 93 636-735 9-102 (104)
447 2yr3_A Myosin light chain kina 99.5 1.6E-14 5.3E-19 122.7 7.9 90 634-729 10-99 (99)
448 2dm2_A Palladin; beta-sandwich 99.5 3.7E-14 1.3E-18 123.0 10.4 99 500-601 5-105 (110)
449 2ckn_A Basic fibroblast growth 99.5 1.8E-14 6.1E-19 121.2 7.8 86 635-728 9-94 (95)
450 2edf_A Obscurin; beta-sandwich 99.5 2.6E-14 8.9E-19 122.3 8.9 93 635-735 8-100 (103)
451 3mlr_H Human monoclonal anti-H 99.5 1.4E-13 4.7E-18 136.6 15.3 170 515-726 11-222 (226)
452 3irg_A Titin; IG-like, titin, 99.5 7E-14 2.4E-18 118.8 11.0 94 502-598 4-99 (100)
453 2edk_A Myosin-binding protein 99.5 7.6E-15 2.6E-19 125.1 4.8 90 635-732 8-101 (101)
454 1pd6_A Cardiac MYBP-C;, myosin 99.5 4.4E-14 1.5E-18 120.7 9.6 89 634-729 14-103 (104)
455 3iu4_H CHP3 FAB heavy chain; a 99.5 1.1E-13 3.9E-18 140.5 14.1 171 515-729 11-223 (263)
456 3cx2_A Myosin-binding protein 99.5 7.9E-14 2.7E-18 120.3 10.9 91 636-729 5-107 (108)
457 2eo9_A Roundabout homolog 1; b 99.5 3.8E-14 1.3E-18 124.7 9.0 94 181-279 6-100 (118)
458 1he7_A High affinity nerve gro 99.5 1.7E-13 5.7E-18 119.4 12.3 82 517-600 13-101 (126)
459 2edn_A Myosin-binding protein 99.5 4.4E-14 1.5E-18 121.8 8.4 93 636-731 13-117 (118)
460 1iam_A ICAM-1, CD54, intercell 99.5 5.7E-13 1.9E-17 125.1 16.6 159 55-265 5-166 (185)
461 1hxm_A Gamma-delta T-cell rece 99.5 2.6E-13 8.9E-18 134.4 15.1 170 53-266 5-199 (229)
462 1nct_A Titin; cell adhesion, g 99.5 3.5E-14 1.2E-18 122.0 7.6 94 181-276 12-105 (106)
463 2yuv_A Myosin-binding protein 99.5 1.4E-13 4.6E-18 117.0 11.2 92 502-600 6-97 (100)
464 1wwc_A Protein (NT-3 growth fa 99.5 1.4E-13 4.9E-18 120.9 11.6 83 651-735 20-106 (118)
465 2dlt_A Myosin binding protein 99.5 3.6E-14 1.2E-18 122.1 7.6 90 635-730 8-97 (106)
466 3sob_H Antibody heavy chain, l 99.5 3.5E-13 1.2E-17 136.6 16.2 182 190-408 30-250 (256)
467 1fhg_A Telokin; immunoglobulin 99.5 1.8E-13 6E-18 126.7 12.7 101 499-602 37-138 (154)
468 3caf_A Fibroblast growth facto 99.5 1.3E-14 4.5E-19 123.4 4.7 82 645-728 17-99 (100)
469 3u1s_H FAB PGT145 heavy chain; 99.5 1.8E-13 6E-18 139.6 13.8 185 53-275 27-263 (267)
470 2eo9_A Roundabout homolog 1; b 99.5 9.1E-14 3.1E-18 122.2 9.9 95 501-601 6-101 (118)
471 2eny_A Obscurin; beta-sandwich 99.5 7.1E-14 2.4E-18 119.5 8.4 94 501-601 6-100 (104)
472 2dav_A SLOW MYBP-C, myosin-bin 99.5 7.4E-14 2.5E-18 121.8 8.5 95 49-144 7-111 (126)
473 2edj_A Roundabout homolog 2; K 99.5 1.2E-13 4.1E-18 117.4 9.7 92 181-277 6-98 (100)
474 2cpc_A KIAA0657 protein; immun 99.5 3.5E-13 1.2E-17 117.4 12.4 96 635-737 10-107 (113)
475 2k1m_A Myosin-binding protein 99.5 1.4E-13 4.8E-18 115.6 9.5 86 636-729 9-94 (95)
476 1gxe_A Myosin binding protein 99.5 1.6E-13 5.4E-18 123.5 10.0 82 514-597 28-138 (139)
477 2yr3_A Myosin light chain kina 99.5 1.1E-13 3.7E-18 117.4 8.5 93 499-597 7-99 (99)
478 3kvq_A Vascular endothelial gr 99.5 8.3E-14 2.8E-18 120.3 7.8 96 501-601 8-103 (108)
479 1x44_A Myosin-binding protein 99.5 2.1E-13 7.2E-18 116.5 9.9 92 502-601 5-99 (103)
480 2ckn_A Basic fibroblast growth 99.5 2.5E-13 8.6E-18 114.1 10.1 88 181-275 7-94 (95)
481 1wwb_X Protein (brain derived 99.5 3.6E-13 1.2E-17 114.9 11.2 83 517-601 14-101 (103)
482 2cry_A KIN of IRRE-like protei 99.5 3.5E-14 1.2E-18 125.7 5.1 97 632-732 11-115 (122)
483 2cr6_A KIAA1556 protein, obscu 99.5 5.4E-14 1.8E-18 123.0 6.1 95 636-737 14-109 (115)
484 2e6q_A Obscurin-like protein 1 99.4 4.1E-13 1.4E-17 115.0 11.3 92 181-279 6-107 (112)
485 2edf_A Obscurin; beta-sandwich 99.4 2.3E-13 7.7E-18 116.4 9.7 93 501-601 6-98 (103)
486 2dm3_A KIAA0992 protein, palla 99.4 8.5E-14 2.9E-18 120.7 6.9 98 501-601 7-105 (110)
487 1iam_A ICAM-1, CD54, intercell 99.4 2.8E-12 9.6E-17 120.4 17.5 161 186-397 2-166 (185)
488 2dku_A KIAA1556 protein; beta- 99.4 1.8E-13 6.2E-18 117.0 8.7 93 635-735 8-100 (103)
489 2edk_A Myosin-binding protein 99.4 6.9E-14 2.4E-18 119.1 5.9 91 501-599 6-100 (101)
490 2e7b_A Obscurin; IG-like domai 99.4 1.2E-13 4.3E-18 118.0 7.3 93 635-735 8-100 (103)
491 3f8u_B Tapasin; endoplasmic re 99.4 3E-12 1E-16 134.1 19.0 175 50-264 159-388 (401)
492 2edh_A Obscurin; structural ge 99.4 1.7E-12 5.8E-17 113.0 14.5 94 499-601 15-108 (113)
493 2cr3_A Basic fibroblast growth 99.4 2.1E-13 7.2E-18 115.5 8.1 81 646-733 13-93 (99)
494 2dlt_A Myosin binding protein 99.4 2.3E-13 7.7E-18 117.0 8.4 92 501-598 6-97 (106)
495 2k1m_A Myosin-binding protein 99.4 6.7E-13 2.3E-17 111.4 11.0 88 502-597 7-94 (95)
496 3caf_A Fibroblast growth facto 99.4 2.5E-13 8.7E-18 115.3 8.1 91 502-596 3-99 (100)
497 3m45_A Cell adhesion molecule 99.4 7.4E-13 2.5E-17 114.2 10.9 94 635-732 6-108 (108)
498 1pd6_A Cardiac MYBP-C;, myosin 99.4 5.3E-13 1.8E-17 113.9 9.7 91 500-597 12-103 (104)
499 2edn_A Myosin-binding protein 99.4 4.7E-13 1.6E-17 115.3 9.4 94 502-598 11-116 (118)
500 3cx2_A Myosin-binding protein 99.4 1E-12 3.6E-17 113.2 11.4 92 503-597 4-107 (108)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=1.6e-69 Score=621.62 Aligned_cols=500 Identities=23% Similarity=0.422 Sum_probs=426.6
Q ss_pred ccccccccccceeeeccCCCchhhhhhhcc---CCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEE
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAKKK---KNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRP 92 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~ 92 (808)
+..++.+|.|.|+|.|.|..+......... ....+.+...+.++ .+.+|+.+.|.|.+. +.|.+.|.|||||..
T Consensus 65 I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~~~~~p~~~~~~~~~-~~~~G~~v~l~C~~~--g~p~~~v~W~k~g~~ 141 (570)
T 3b43_A 65 INKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDV-HETLGFPVAFECRIN--GSEPLQVSWYKDGEL 141 (570)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCCCCCCEESSCCCCE-EEETTSCEEEEEEEE--SSSSCEEEEEETTEE
T ss_pred EccCChhhCEEEEEEEEeCCceEEEEEEEEECCCCCCCcccccCCCe-EecCCCeEEEEEEEc--cCCCCEEEEEECCEE
Confidence 445678899999999999876654433322 12345556666676 788999999999999 578889999999999
Q ss_pred eeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeecccccccc
Q psy2145 93 VTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQR 172 (808)
Q Consensus 93 l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (808)
|..+.++.........+|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 142 l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~--------------------------- 194 (570)
T 3b43_A 142 LKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH--------------------------- 194 (570)
T ss_dssp CCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC---------------------------
T ss_pred CcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC---------------------------
Confidence 99888877666666779999999999999999999999999888888888532
Q ss_pred ccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCC
Q psy2145 173 GEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPED 252 (808)
Q Consensus 173 ~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D 252 (808)
..||.|...+....+.+|++++|.|.+ .+.|.+.|+|+|+|..+..+.++.+....+..+|.|.+++.+|
T Consensus 195 --------~~pp~~~~~p~~~~v~~G~~~~l~C~~--~g~p~p~i~W~k~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D 264 (570)
T 3b43_A 195 --------EVPPFFDLKPVSVDLALGESGTFKCHV--TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGD 264 (570)
T ss_dssp --------CCCCEEEECCCCBCCBSBSCEEEEEEE--ESSSCCEEEEEETTEECCTTSSEEEEEETTEEEEEESSBCGGG
T ss_pred --------CCCCccccCCceeEecCCCeEEEEEEE--EECCCCEEEEEECCEECcCCCcEEEEEECCEEEEEEcccCccc
Confidence 457888888888899999999999999 5788899999999999988888777665566689999999999
Q ss_pred cEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCC-ceEeecCC
Q psy2145 253 SGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMR-DIHVAENQ 331 (808)
Q Consensus 253 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~-~~~v~~G~ 331 (808)
+|.|+|.|.|..|....++.|.|.. +|.|...+. ...+.+|+
T Consensus 265 ~G~Y~C~a~N~~g~~~~~~~l~V~~-------------------------------------~p~~~~~~~~~~~v~~g~ 307 (570)
T 3b43_A 265 AGQYTCYASNVAGKDSCSAQLGVQE-------------------------------------PPRFIKKLEPSRIVKQDE 307 (570)
T ss_dssp CEEEEEEEEETTEEEEEEEEECCBC-------------------------------------CCEEEECCCSBCCEESSC
T ss_pred CEEEEEEEECCCCcEEEEEEEEeec-------------------------------------CCcccccCCCccEEcCCC
Confidence 9999999999999998888888764 555554443 34578999
Q ss_pred eEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy2145 332 AAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKA 411 (808)
Q Consensus 332 ~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 411 (808)
.+.|.|.+ .|.|.+.|.|+|+|.++..+.++.+........|.|.++..+|+|.|+|.|.|..|....++.|.|..+
T Consensus 308 ~~~l~C~~--~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~- 384 (570)
T 3b43_A 308 HTRYECKI--GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP- 384 (570)
T ss_dssp EEEEEEEE--ESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECC-
T ss_pred cEEEEEEE--eeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCC-
Confidence 99999999 799999999999999999888887776666778999999999999999999999999999898888754
Q ss_pred cccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCC
Q psy2145 412 SLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHK 491 (808)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (808)
T Consensus 385 -------------------------------------------------------------------------------- 384 (570)
T 3b43_A 385 -------------------------------------------------------------------------------- 384 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCC
Q psy2145 492 RPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRA 571 (808)
Q Consensus 492 ~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~ 571 (808)
|.|...+.+. .+.+|+.+.|.|.+ .|.|.|.|+|+|||..|..+.++.+..++...+|.|.++..
T Consensus 385 ------------P~~~~~~~~~-~~~~G~~v~l~C~~--~g~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~v~~ 449 (570)
T 3b43_A 385 ------------PVFRKKPHPV-ETLKGADVHLECEL--QGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDS 449 (570)
T ss_dssp ------------CEECSCCCCE-EECTTCCEEEEEEE--ESSSSCCCEEEETTEECCSSSSEEEEEETTEEEEEECSCCG
T ss_pred ------------CeeecCCCce-eecCCCEEEEEEEE--ecCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCCh
Confidence 3333333333 46789999999999 79999999999999999988898888887777999999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|...+++.|.|.. +|.|...+.. ..+.+|
T Consensus 450 ~D~G~Y~C~A~N~~G~~~~~~~l~v~~------------------------------------~P~~~~~~~~-~~~~~g 492 (570)
T 3b43_A 450 ADIGEYQCKASNDVGSDTCVGSITLKA------------------------------------PPRFVKKLSD-ISTVVG 492 (570)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEECC------------------------------------CCEEEECCCC-BCCBTT
T ss_pred hhCEEEEEEEEECCCeEEEEEEEEecc------------------------------------CCcccccCCC-ceecCC
Confidence 999999999999999999999998875 3666666554 578899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEc-cCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 652 QSAHYDCRVVPVGDPTMRFEWFVNGVEL-KMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 652 ~~v~l~C~v~~~g~P~p~i~W~~~g~~l-~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
+.+.|.|.+ .|.|.|.|.|+|||..+ ..+.++.+...++..+|.|.++..+|+|.|+|.|.|.+|.+++++.|.|.
T Consensus 493 ~~~~l~c~~--~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~a~L~V~ 569 (570)
T 3b43_A 493 EEVQLQATI--EGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569 (570)
T ss_dssp CCEEEEEEE--ESCSSCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CeEEEEEEE--ecCCCCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCcEEEEEEEEEEe
Confidence 999999999 79999999999998654 55678887777778899999999999999999999999999999999885
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=8e-69 Score=615.88 Aligned_cols=479 Identities=24% Similarity=0.465 Sum_probs=415.5
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
+|.++..+.++ .+.+|+.++|.|.+. +.|.+.|.|||||..|..+.++.+...++..+|.|.+++.+|+|.|+|.|.
T Consensus 5 pP~f~~~~~~~-~v~~G~~v~L~C~~~--g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (570)
T 3b43_A 5 PPYFIEPLEHV-EAAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAE 81 (570)
T ss_dssp CCEEEECCCCE-EECTTSCEEEEEEEE--SSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCcceEECCce-EEcCCCEEEEEEEEc--cCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEE
Confidence 45566667777 899999999999998 578899999999999998888888777777899999999999999999999
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..|...+++.|.|... ..+|.|...+.+..+.+|+++.|.|.+
T Consensus 82 N~~g~~~~~~~l~v~~~-----------------------------------~~~p~~~~~~~~~~~~~G~~v~l~C~~- 125 (570)
T 3b43_A 82 NSVGAVASSAVLVIKER-----------------------------------KLPPSFARKLKDVHETLGFPVAFECRI- 125 (570)
T ss_dssp ETTEEEEEEEEEEECCC-----------------------------------CCCCEESSCCCCEEEETTSCEEEEEEE-
T ss_pred eCCceEEEEEEEEECCC-----------------------------------CCCCcccccCCCeEecCCCeEEEEEEE-
Confidence 99999888888877531 347888888888889999999999999
Q ss_pred ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCccccccccc
Q psy2145 209 PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHG 288 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~ 288 (808)
.+.|.+.|.|+|||..+..+.++......+..+|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 126 -~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~---------- 194 (570)
T 3b43_A 126 -NGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEH---------- 194 (570)
T ss_dssp -ESSSSCEEEEEETTEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC----------
T ss_pred -ccCCCCEEEEEECCEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEEEEeCCcEEEEEEEEEEcCC----------
Confidence 578889999999999998877766555555668999999999999999999999999988888888642
Q ss_pred chhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEe
Q psy2145 289 ESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMH 368 (808)
Q Consensus 289 ~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~ 368 (808)
..+|.|...+....+.+|+.+.|.|.+ .|.|.+.|+|+|+|.++..+.++.+..
T Consensus 195 ------------------------~~pp~~~~~p~~~~v~~G~~~~l~C~~--~g~p~p~i~W~k~g~~i~~~~~~~~~~ 248 (570)
T 3b43_A 195 ------------------------EVPPFFDLKPVSVDLALGESGTFKCHV--TGTAPIKITWAKDNREIRPGGNYKMTL 248 (570)
T ss_dssp ------------------------CCCCEEEECCCCBCCBSBSCEEEEEEE--ESSSCCEEEEEETTEECCTTSSEEEEE
T ss_pred ------------------------CCCCccccCCceeEecCCCeEEEEEEE--EECCCCEEEEEECCEECcCCCcEEEEE
Confidence 246777777777788999999999999 789999999999999998888877766
Q ss_pred eCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccC
Q psy2145 369 DFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQ 448 (808)
Q Consensus 369 ~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (808)
..+..+|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 249 ~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~--------------------------------------- 289 (570)
T 3b43_A 249 VENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE--------------------------------------- 289 (570)
T ss_dssp ETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBC---------------------------------------
T ss_pred ECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeec---------------------------------------
Confidence 66667899999999999999999999999988888887764
Q ss_pred CeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEE
Q psy2145 449 PSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRL 528 (808)
Q Consensus 449 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v 528 (808)
+|.|...+.....+.+|+.+.|.|.+
T Consensus 290 ------------------------------------------------------~p~~~~~~~~~~~v~~g~~~~l~C~~ 315 (570)
T 3b43_A 290 ------------------------------------------------------PPRFIKKLEPSRIVKQDEHTRYECKI 315 (570)
T ss_dssp ------------------------------------------------------CCEEEECCCSBCCEESSCEEEEEEEE
T ss_pred ------------------------------------------------------CCcccccCCCccEEcCCCcEEEEEEE
Confidence 34444444443357899999999999
Q ss_pred eeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccC
Q psy2145 529 IPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQH 608 (808)
Q Consensus 529 ~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~ 608 (808)
.|.|.+.|.|+|||..+..+.++.+....+...|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 316 --~g~P~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P-------- 385 (570)
T 3b43_A 316 --GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPP-------- 385 (570)
T ss_dssp --ESSSSCEEEEEETTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCC--------
T ss_pred --eeCCCCEEEEeECCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCC--------
Confidence 7999999999999999998888888777777789999999999999999999999999999999998643
Q ss_pred cccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEE
Q psy2145 609 PEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQ 688 (808)
Q Consensus 609 p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~ 688 (808)
.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||.+|..+.++.+.
T Consensus 386 ----------------------------~~~~~~~-~~~~~~G~~v~l~C~~--~g~P~p~v~W~k~g~~l~~~~~~~~~ 434 (570)
T 3b43_A 386 ----------------------------VFRKKPH-PVETLKGADVHLECEL--QGTPPFQVSWHKDKRELRSGKKYKIM 434 (570)
T ss_dssp ----------------------------EECSCCC-CEEECTTCCEEEEEEE--ESSSSCCCEEEETTEECCSSSSEEEE
T ss_pred ----------------------------eeecCCC-ceeecCCCEEEEEEEE--ecCCCCEEEEEECCEECcCCCCEEEE
Confidence 3333322 2457789999999999 79999999999999999999999998
Q ss_pred EeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCcccc
Q psy2145 689 HDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 689 ~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
.++...+|.|.++..+|+|.|+|.|.|.+|..+.++.|.|..+|.+...
T Consensus 435 ~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~ 483 (570)
T 3b43_A 435 SENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKK 483 (570)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEEC
T ss_pred EcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCccccc
Confidence 8888889999999999999999999999999999999999887766543
No 3
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.2e-58 Score=538.43 Aligned_cols=555 Identities=17% Similarity=0.254 Sum_probs=395.1
Q ss_pred CCCccccccccccceeeeccCCCchh-hhhhhc--cCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC
Q psy2145 13 SSPYLSSKKETSYHWQNVPVPEWSKE-QENAKK--KKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN 89 (808)
Q Consensus 13 ~~~~~~~~~ed~g~y~c~~~~~~~~~-~~~~~~--~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~ 89 (808)
..-+..++.+|.|.|.|.+.+..... .....+ ......+.+..+... .+.+|+.+.|.|.+. + |.+.|.|+|+
T Consensus 72 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~-~v~~g~~v~l~C~~~--~-p~~~v~W~~~ 147 (642)
T 1e07_A 72 SLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSK-PVEDKDAVAFTCEPE--T-QDATYLWWVN 147 (642)
T ss_pred cEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEccCce-eEecCCcEEEEEECC--C-CCeeEEEEEC
Confidence 34466778899999999998763221 111111 111112333333444 678999999999998 4 7889999999
Q ss_pred CEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeecccc
Q psy2145 90 GRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKS 168 (808)
Q Consensus 90 g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (808)
|..+..+.++.+..+++ +|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...
T Consensus 148 g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~----------------------- 202 (642)
T 1e07_A 148 NQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYG----------------------- 202 (642)
T ss_pred CeECCCCCceEEcCCCC--EEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeC-----------------------
Confidence 99999888887655443 79999999999999999999988764 34577777532
Q ss_pred ccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccC
Q psy2145 169 KYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQC 248 (808)
Q Consensus 169 ~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~ 248 (808)
|+.+...+.+..+.+|+.++|.|.+ .+.|.+.|.|++||..+.... .|.|.++
T Consensus 203 --------------p~~~~~~~~~~~~~~G~~~~l~C~~--~g~p~~~i~W~~~g~~i~~~~-----------~L~i~~~ 255 (642)
T 1e07_A 203 --------------PDAPTISPLNTSYRSGENLNLSCHA--ASNPPAQYSWFVNGTFQQSTQ-----------ELFIPNI 255 (642)
T ss_pred --------------CCCcEEecCCcccccCCEEEEEEEc--CCCCCcEEEEEECCeEcccCC-----------ceEEecc
Confidence 2233345566778999999999999 689999999999999884321 6999999
Q ss_pred CCCCcEEEEEEEEeCceeEEEE--EEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceE
Q psy2145 249 LPEDSGVYTCRAVNALGQAVTS--GNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIH 326 (808)
Q Consensus 249 ~~~D~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 326 (808)
+.+|+|.|+|.|.|..|....+ +.|.|...+ .+|.+.. .....
T Consensus 256 ~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~----------------------------------~~p~i~~-~~~~~ 300 (642)
T 1e07_A 256 TVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEP----------------------------------PKPFITS-NNSNP 300 (642)
T ss_pred cccCCeEEEEEEEeCCCceEEeeeEEEEEEccC----------------------------------CCCEEEc-CCcee
Confidence 9999999999999988866544 455554321 1333332 23345
Q ss_pred eecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEE
Q psy2145 327 VAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV-TSSTL 405 (808)
Q Consensus 327 v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l 405 (808)
+..|+.+.|.|.+ .+.| +.++|+++|..+..+.++.+..+++ +|.|.++..+|+|.|+|.|.|..|... ..+.|
T Consensus 301 ~~~g~~v~l~C~~--~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l 375 (642)
T 1e07_A 301 VEDEDAVALTCEP--EIQN-TTYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVDHSDPVIL 375 (642)
T ss_pred EecCCcEEEEEEC--CCCC-ccEEEEECCccCCCcCCEEEeCCCC--EEEEeccCcccCeeEEEEEeCCCCCcceeeEEE
Confidence 5668889999998 6766 7999999999998888877765544 799999999999999999999999754 45888
Q ss_pred EEEecccccccccchHHHhhhhcccccccccccc--ceeeee--ccCCeeEEecCCCceeecCCceeEecccCCchhhhh
Q psy2145 406 FVESKASLQLDTQNEAALQKIQNLEDTSRFKRKE--EEEVEV--TQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKI 481 (808)
Q Consensus 406 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (808)
.|...|..+..... ...+.... ...+.+ ..+|.+.|..++..........+........|.+.|
T Consensus 376 ~V~~~p~~~~~~~~------------~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~~~~~~~L~i~~~~~~d~G~Y~C 443 (642)
T 1e07_A 376 NVLYGPDDPTISPS------------YTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTC 443 (642)
T ss_pred EEEcCCCCCeecCC------------ceEecCCCcEEEEEEcCccCCCeEEEEECCEEcCCCceEEEccCChhhCeEEEE
Confidence 88876654321100 00111111 222222 345667666655322111111111222333445555
Q ss_pred cccccCCCCCCCCcCCC-C--ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEee
Q psy2145 482 RKLEDTEPHKRPEVDDN-A--TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHD 558 (808)
Q Consensus 482 ~~~~~~~~~~~~~~~~~-~--~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~ 558 (808)
...+..+.......... . ...+|.+.. ..+. .+.+|+.+.|.|.+ . .|.+.+.|+|+|..+..+.++.+..+
T Consensus 444 ~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~-~v~~g~~v~l~C~~--~-~~~~~i~W~~~g~~l~~~~~~~~~~~ 518 (642)
T 1e07_A 444 QANNSASGHSRTTVKTITVSAELPKPSISS-NNSK-PVEDKDAVAFTCEP--E-AQNTTYLWWVNGQSLPVSPRLQLSNG 518 (642)
T ss_pred EEEcCCCCCcccceEEEEEeccCCCceEec-CCce-eecCCCeEEEEEEC--C-CCCcEEEEEECCEeCCCCCcEEEcCC
Confidence 55444332222111111 1 113455443 3333 57899999999998 5 48899999999999998888877655
Q ss_pred CcEEEEEECCCCCCCCEEEEEEEEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCe
Q psy2145 559 FGYVAMDLSHVRAEDEGIYICKATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPI 637 (808)
Q Consensus 559 ~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~ 637 (808)
++ .|.|.++..+|+|.|+|.|.|..|...+ ++.|.|...|. .
T Consensus 519 ~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~-----------------------------------~ 561 (642)
T 1e07_A 519 NR--TLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD-----------------------------------T 561 (642)
T ss_pred Cc--EEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCC-----------------------------------c
Confidence 44 7999999999999999999999998654 68888886432 1
Q ss_pred EEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCC
Q psy2145 638 FTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRA 717 (808)
Q Consensus 638 ~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~ 717 (808)
+...+ ....+.+|+.++|.|.+ .|+|.|.|.|+|||.+|..+ ..|.|.++..+|+|.|+|.|.|.+
T Consensus 562 ~~~~~-~~~~v~~g~~~~l~C~~--~g~p~p~v~W~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~N~~ 627 (642)
T 1e07_A 562 PIISP-PDSSYLSGANLNLSCHS--ASNPSPQYSWRINGIPQQHT-----------QVLFIAKITPNNNGTYACFVSNLA 627 (642)
T ss_pred ceecC-CceeEEcCCcEEEEEEe--ccCCCCeEEEEECCEECccC-----------ceEEECcccccCCeEEEEEEEecc
Confidence 22222 23568899999999999 79999999999999998743 279999999999999999999999
Q ss_pred cceEEEEEEEEEeC
Q psy2145 718 GEAVSSTSLKVKSK 731 (808)
Q Consensus 718 G~~~~s~~l~V~~~ 731 (808)
|.++.++.|.|...
T Consensus 628 G~~~~s~~l~V~v~ 641 (642)
T 1e07_A 628 TGRNNSIVKSITVS 641 (642)
T ss_pred cCcceeEEEEEEEc
Confidence 99999999998753
No 4
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-56 Score=538.36 Aligned_cols=485 Identities=20% Similarity=0.312 Sum_probs=385.1
Q ss_pred ccccccccccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI 95 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~ 95 (808)
+..++.+|.|.|.|.+.|..+.......+.....+.+...|... .+.+|++++|.|.+.+ .|.+.|.|+|+|..+..
T Consensus 310 i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~-~v~~G~~v~l~C~~~g--~p~~~v~W~k~g~~~~~ 386 (816)
T 3dmk_A 310 IKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQ-TVDFGRPAVFTCQYTG--NPIKTVSWMKDGKAIGH 386 (816)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEE-ECCTTSCEEEEEEEEE--ECCCEEEEEETTEECSC
T ss_pred ECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCce-EecCCCCEEEEEEEec--cCCCEEEEEECCEECCC
Confidence 55678899999999999987765443333333334455566666 8999999999999984 68889999999998864
Q ss_pred cCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccc
Q psy2145 96 GHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEY 175 (808)
Q Consensus 96 ~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (808)
+. .+|.|.+++.+|+|.|+|.|.|..|....++.|.|...
T Consensus 387 ~~----------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~------------------------------ 426 (816)
T 3dmk_A 387 SE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR------------------------------ 426 (816)
T ss_dssp CS----------SEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS------------------------------
T ss_pred CC----------CEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc------------------------------
Confidence 32 26999999999999999999999998777777776421
Q ss_pred cccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEe-----cCceEEEEEccCCC
Q psy2145 176 IEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETN-----NFGFVALDIMQCLP 250 (808)
Q Consensus 176 ~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~~~L~I~~~~~ 250 (808)
..+|.|...+....+.+|+.++|.|.+ .+.|.+.|.|+++|..+..+.++.... ......|.|.++..
T Consensus 427 -----~~~p~i~~~~~~~~v~~G~~v~L~C~~--~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 499 (816)
T 3dmk_A 427 -----FDPPVIRQAFQEETMEPGPSVFLKCVA--GGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHA 499 (816)
T ss_dssp -----SCCCEEEEECCCEEECSSSCEEEEEEE--ECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCT
T ss_pred -----cCCCceEecCcceEEcCCCCEEEEEEE--ecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccc
Confidence 457888888888899999999999999 588999999999999998877765421 22345799999999
Q ss_pred CCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecC
Q psy2145 251 EDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAEN 330 (808)
Q Consensus 251 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G 330 (808)
+|+|.|+|.|.|..|....++.|.|.. +|.+ ..+....+.+|
T Consensus 500 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~-------------------------------------~p~~-~~~~~~~v~~G 541 (816)
T 3dmk_A 500 NDGGLYKCIAKSKVGVAEHSAKLNVYG-------------------------------------LPYI-RQMEKKAIVAG 541 (816)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEECS-------------------------------------SCEE-CCCCCEEEETT
T ss_pred cCCEEEEEEEEECCCeEEEEEEEEEec-------------------------------------CCee-EccCCeEEecC
Confidence 999999999999999999999999865 3322 23345678899
Q ss_pred CeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCC-CCCCeEEEEEEEcCCcce-EEEEEEEEE
Q psy2145 331 QAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTY-PEDSGTYTCRAVNELGEA-VTSSTLFVE 408 (808)
Q Consensus 331 ~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~-~~d~G~Y~C~a~n~~g~~-~~~~~l~V~ 408 (808)
+.+.|.|.+ .+.|.+.|.|+++|..+..+.+.....+ + +|.|.++. .+|+|.|+|.|.|..|.. .....|.|.
T Consensus 542 ~~v~l~C~~--~g~p~~~i~W~k~~~~l~~~~~~~~~~~-~--~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~ 616 (816)
T 3dmk_A 542 ETLIVTCPV--AGYPIDSIVWERDNRALPINRKQKVFPN-G--TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVM 616 (816)
T ss_dssp CCEEEECCE--ECSSEEEEEEEETTEESCCSTTEEECTT-S--EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEE
T ss_pred CeEEEEEEe--cCCCCCEEEEEECCeEcccCCceEEecC-C--eEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEe
Confidence 999999999 7899999999999999988777766544 3 69999998 689999999999999864 334666665
Q ss_pred ecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCC
Q psy2145 409 SKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTE 488 (808)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (808)
.+|.+.
T Consensus 617 ~~p~~~-------------------------------------------------------------------------- 622 (816)
T 3dmk_A 617 VLPRII-------------------------------------------------------------------------- 622 (816)
T ss_dssp CCCCCB--------------------------------------------------------------------------
T ss_pred cCCccc--------------------------------------------------------------------------
Confidence 443221
Q ss_pred CCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC-CcEEEEEECCEecCCCCCeEEEee-CcEEEEEE
Q psy2145 489 PHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-TLKVEWFRNEKPLEDSSRITTKHD-FGYVAMDL 566 (808)
Q Consensus 489 ~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I 566 (808)
........+.+|+.+.|.|.+ .+.| ++.|+|+|||+.+..+..+..... .....|.|
T Consensus 623 -------------------~~~~~~~~~~~G~~v~L~C~~--~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i 681 (816)
T 3dmk_A 623 -------------------PFAFEEGPAQVGQYLTLHCSV--PGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTI 681 (816)
T ss_dssp -------------------CCCCCSSCEESSCEEEEEEBC--CCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEE
T ss_pred -------------------cccccccccCCCCeEEEEEEE--eCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEE
Confidence 111111147889999999998 5444 559999999999977666554433 34568999
Q ss_pred CCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 567 SHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 567 ~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
.++..+|+|.|+|.|.|..|....++.|.|..+ |.|...+. ..
T Consensus 682 ~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~------------------------------------P~~~~~~~-~~ 724 (816)
T 3dmk_A 682 EAVEASHAGNFTCHARNLAGHQQFTTPLNVYVP------------------------------------PRWILEPT-DK 724 (816)
T ss_dssp ESCCGGGCEEEEEEEECSSCEEEEEEEECEEEE------------------------------------EEEEECCC-CE
T ss_pred ccCChhhCEEEEEEEEeCCccEEEEEEEEEEeC------------------------------------Cceeeecc-cc
Confidence 999999999999999999999999999999875 44444433 25
Q ss_pred cccCCceEEEEEEEeeCCCCCeEEEEEECCEEcc-------CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 647 EIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELK-------MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~-------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.+.+|+.++|.|.+ .|.|.|.|+|+|+|..+. .+.++.+ ..+ +|.|.++..+|+|.|+|.|.|.+|.
T Consensus 725 ~v~~G~~v~l~C~~--~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~ 798 (816)
T 3dmk_A 725 AFAQGSDAKVECKA--DGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV--EEG--TLHVDNIQKTNEGYYLCEAINGIGS 798 (816)
T ss_dssp EEETTCCEEEECEE--EEESCCEEECCEECSSSTTCCBCCCCBTTEEE--ETT--EEEECSCCGGGCEEEEEEEECSSSS
T ss_pred eecCCCcEEEEEEE--ecCCCCeEEEEecCCCCCccccccccCCCEEe--cCC--EEEECcCChhhCeEEEEEEEeCCCC
Confidence 67899999999999 799999999999875543 2233333 333 7999999999999999999999999
Q ss_pred eEEEEEEEEEeC
Q psy2145 720 AVSSTSLKVKSK 731 (808)
Q Consensus 720 ~~~s~~l~V~~~ 731 (808)
+..++.+..+..
T Consensus 799 ~~~~v~~~~~~~ 810 (816)
T 3dmk_A 799 GLSAVIMISVQA 810 (816)
T ss_dssp CEEEEEEEEEEC
T ss_pred CcEEEEEEEeec
Confidence 999988876543
No 5
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=100.00 E-value=1.5e-55 Score=529.17 Aligned_cols=494 Identities=20% Similarity=0.291 Sum_probs=381.9
Q ss_pred CCCccccccccc-cceeeeccCCCchhhhhhh------ccCC---ccceeecC--CCCccccCCCCcEEEEEEEeeCCCC
Q psy2145 13 SSPYLSSKKETS-YHWQNVPVPEWSKEQENAK------KKKN---FIYYTVTK--PKSIENLRERGHAHFECKLEPVTDS 80 (808)
Q Consensus 13 ~~~~~~~~~ed~-g~y~c~~~~~~~~~~~~~~------~~~~---~~~~~~~~--p~~~~~v~~G~~v~l~C~~~~~~~p 80 (808)
..-+..++.+|+ |.|.|.+.+.......... .... ..+.+... +... .+.+|+.+.|.|.+. +.|
T Consensus 200 ~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~~~~~~~P~i~~~~~~~~~-~v~~g~~v~L~C~~~--g~p 276 (816)
T 3dmk_A 200 ELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVPKVVSLAKFDMK-TYSGSSTMALLCPAQ--GYP 276 (816)
T ss_dssp CEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEECCCSCCCCBCCGGGGEEEE-EECTTSCEEECCCCB--CSS
T ss_pred eEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeCCCCCCCCccccccCccce-EEeCCCeEEEEEEee--ecC
Confidence 344667888998 9999999764322211000 0000 01111111 1233 678999999999998 578
Q ss_pred CceEEEEeCCEE------eeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccc
Q psy2145 81 NLKVEWFKNGRP------VTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQN 154 (808)
Q Consensus 81 ~~~v~W~~~g~~------l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~ 154 (808)
.+.|.|+|++.. +..+.++.. ..+ +|.|.+++.+|+|.|+|.|.|..|.....+.|.|.
T Consensus 277 ~p~v~W~k~~~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~----------- 341 (816)
T 3dmk_A 277 VPVFRWYKFIEGTTRKQAVVLNDRVKQ--VSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT----------- 341 (816)
T ss_dssp CCEEEEEEECTTSSCEEECCCSSSEEE--ETT--EEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC-----------
T ss_pred CCeEEEEeCCCCCccCcceecCCceEe--ccc--eEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEc-----------
Confidence 899999995432 222334332 222 79999999999999999999999988888888774
Q ss_pred cccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEE
Q psy2145 155 ETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTE 234 (808)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~ 234 (808)
.+|.+...+....+.+|++++|.|.+ .+.|.+.+.|+|||..+..+..
T Consensus 342 ---------------------------~~~~~~~~~~~~~v~~G~~v~l~C~~--~g~p~~~v~W~k~g~~~~~~~~--- 389 (816)
T 3dmk_A 342 ---------------------------APLSAKIDPPTQTVDFGRPAVFTCQY--TGNPIKTVSWMKDGKAIGHSES--- 389 (816)
T ss_dssp ---------------------------EEEEEEEESSEEECCTTSCEEEEEEE--EEECCCEEEEEETTEECSCCSS---
T ss_pred ---------------------------CCCceeeCCCceEecCCCCEEEEEEE--eccCCCEEEEEECCEECCCCCC---
Confidence 34556667778889999999999999 5778899999999999865421
Q ss_pred EecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCC
Q psy2145 235 TNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQ 314 (808)
Q Consensus 235 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 314 (808)
.|.|.+++.+|+|.|+|.|.|..|....++.|.|... ..
T Consensus 390 -------~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~----------------------------------~~ 428 (816)
T 3dmk_A 390 -------VLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGR----------------------------------FD 428 (816)
T ss_dssp -------EEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCS----------------------------------SC
T ss_pred -------EEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccc----------------------------------cC
Confidence 7999999999999999999999998888888877531 24
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEe-----eCcEEEEEEccCCCCCCeEEE
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMH-----DFGYVALNFKYTYPEDSGTYT 389 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-----~~~~~~L~I~~v~~~d~G~Y~ 389 (808)
+|.+...+....+.+|+.+.|.|.+ .|.|.+.|+|+++|..+..+.++.... ......|.|.++..+|+|.|+
T Consensus 429 ~p~i~~~~~~~~v~~G~~v~L~C~~--~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 506 (816)
T 3dmk_A 429 PPVIRQAFQEETMEPGPSVFLKCVA--GGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYK 506 (816)
T ss_dssp CCEEEEECCCEEECSSSCEEEEEEE--ECSSCCEEEEEETTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEE
T ss_pred CCceEecCcceEEcCCCCEEEEEEE--ecCCCCEEEEEECCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEE
Confidence 7777777777889999999999998 799999999999999998877765422 223457999999999999999
Q ss_pred EEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeE
Q psy2145 390 CRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTII 469 (808)
Q Consensus 390 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 469 (808)
|.|.|..|....++.|.|...|.+.
T Consensus 507 C~a~n~~g~~~~~~~l~V~~~p~~~------------------------------------------------------- 531 (816)
T 3dmk_A 507 CIAKSKVGVAEHSAKLNVYGLPYIR------------------------------------------------------- 531 (816)
T ss_dssp EEEEETTEEEEEEEEEEECSSCEEC-------------------------------------------------------
T ss_pred EEEEECCCeEEEEEEEEEecCCeeE-------------------------------------------------------
Confidence 9999999999888888887543211
Q ss_pred ecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC
Q psy2145 470 TDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED 549 (808)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~ 549 (808)
.+... .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+..
T Consensus 532 ---------------------------------------~~~~~-~v~~G~~v~l~C~~--~g~p~~~i~W~k~~~~l~~ 569 (816)
T 3dmk_A 532 ---------------------------------------QMEKK-AIVAGETLIVTCPV--AGYPIDSIVWERDNRALPI 569 (816)
T ss_dssp ---------------------------------------CCCCE-EEETTCCEEEECCE--ECSSEEEEEEEETTEESCC
T ss_pred ---------------------------------------ccCCe-EEecCCeEEEEEEe--cCCCCCEEEEEECCeEccc
Confidence 11111 47789999999999 7899999999999999987
Q ss_pred CCCeEEEeeCcEEEEEECCCC-CCCCEEEEEEEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCC
Q psy2145 550 SSRITTKHDFGYVAMDLSHVR-AEDEGIYICKATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQ 627 (808)
Q Consensus 550 ~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~ 627 (808)
+.+.....+ + +|.|.++. .+|+|.|+|.|.|..|. ...++.|.|...|.+
T Consensus 570 ~~~~~~~~~-~--~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~------------------------- 621 (816)
T 3dmk_A 570 NRKQKVFPN-G--TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRI------------------------- 621 (816)
T ss_dssp STTEEECTT-S--EEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCC-------------------------
T ss_pred CCceEEecC-C--eEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCcc-------------------------
Confidence 777655433 3 79999998 58999999999999995 444567777654432
Q ss_pred CCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCC-CeEEEEEECCEEccCCCcEEEEEe-CCEEEEEEccCCCCC
Q psy2145 628 EPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDP-TMRFEWFVNGVELKMGSRFHVQHD-FGYVTLDITKCVPAD 705 (808)
Q Consensus 628 ~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D 705 (808)
.........+.+|+.++|.|.+ .|.| ++.|.|++||..+..+.++.+... ...+.|.|.++..+|
T Consensus 622 -----------~~~~~~~~~~~~G~~v~L~C~~--~~~~~~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d 688 (816)
T 3dmk_A 622 -----------IPFAFEEGPAQVGQYLTLHCSV--PGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASH 688 (816)
T ss_dssp -----------BCCCCCSSCEESSCEEEEEEBC--CCSSSCCEEEEEETTBCCCGGGTCEEEEETTTEEEEEEESCCGGG
T ss_pred -----------ccccccccccCCCCeEEEEEEE--eCCCCCCEEEEEECCeEcCCCCCeeEEEcCCCeeEEEEccCChhh
Confidence 1111123457889999999998 5555 459999999999987766665543 456799999999999
Q ss_pred cEEEEEEEEeCCcceEEEEEEEEEeCCCcccc
Q psy2145 706 SGVYMCKAINRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 706 ~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
+|.|+|.|.|.+|..+.++.|.|..+|.+...
T Consensus 689 ~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~ 720 (816)
T 3dmk_A 689 AGNFTCHARNLAGHQQFTTPLNVYVPPRWILE 720 (816)
T ss_dssp CEEEEEEEECSSCEEEEEEEECEEEEEEEEEC
T ss_pred CEEEEEEEEeCCccEEEEEEEEEEeCCceeee
Confidence 99999999999999999999999988876543
No 6
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=1.2e-53 Score=492.81 Aligned_cols=463 Identities=17% Similarity=0.239 Sum_probs=346.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCC-CCceEEEEeCCEEe-----e---------ccCcEEEEe--eCCeEEEEEccc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTD-SNLKVEWFKNGRPV-----T---------IGHRFRPIH--DFGYVALDIIDT 115 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~-p~~~v~W~~~g~~l-----~---------~~~r~~~~~--~~~~~~L~I~~~ 115 (808)
+..|..+ .+.+|++++|.|.+.+... ....|.|+|++..+ . ...|+.+.. +++.++|.|.++
T Consensus 4 i~~P~~v-~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v 82 (585)
T 2ocw_A 4 IFGPEEV-NSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQL 82 (585)
T ss_pred ccCccee-EEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCC
Confidence 5678888 8999999999999985211 13489999998532 1 134666554 456678999999
Q ss_pred CcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceee
Q psy2145 116 IPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEI 195 (808)
Q Consensus 116 ~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v 195 (808)
+.+|+|.|+|.|.|..|.....+.|.|. .+|.|...+....+
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~l~V~--------------------------------------~~p~~~~~~~~~~v 124 (585)
T 2ocw_A 83 SQDDSGRYKCGLGINSRGLSFDVSLEVS--------------------------------------QGPGLLNDTKVYTV 124 (585)
T ss_pred CcccCEEEEEEcccCCCCceEEEEEEEe--------------------------------------cCccccCCCccEEE
Confidence 9999999999999998888888888884 45667777788889
Q ss_pred cCCCeEEEEEEEeecCCCCeEEEEeeCCEEcc----C---------CCceEEEecC---ceEEEEEccCCCCCcEEEEEE
Q psy2145 196 KEGQRAHFECRLIPVSDNTMKVEWFHNNVPIK----S---------GSRFTETNNF---GFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 196 ~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~----~---------~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
.+|+.++|.|.+.+ +.|.+.+.|+|++..+. . ..++.+..++ +.++|.|.+++.+|+|.|+|.
T Consensus 125 ~~G~~v~l~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 203 (585)
T 2ocw_A 125 DLGRTVTINCPFKT-ENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQ 203 (585)
T ss_pred EcCCCEEEEEEecC-CCCCccEEEEECCCCCceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEE
Confidence 99999999999942 44567899999876421 1 2344443332 445899999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
|.|..|.....+.|.|... + +..+.+.+|+.+.|.|.+
T Consensus 204 a~n~~g~~~~~~~l~V~~~------------------------------------~------p~~~~~~~G~~v~l~C~~ 241 (585)
T 2ocw_A 204 AGDDSNSNKKNADLQVLKP------------------------------------E------PELVYEDLRGSVTFHCAL 241 (585)
T ss_pred eccCCccccceEEEEEccC------------------------------------C------CceeEEcCCCcEEEEEEc
Confidence 9999998888888888642 1 223457799999999997
Q ss_pred eecCCCc-cEEEEE-ECCEe---cc---------CCCcEEEEee--CcEEEEEEccCCCCCCeEEEEEEEcCCcceE---
Q psy2145 340 IPVGDSK-LKVTWL-RNGVP---IQ---------ASNRVSTMHD--FGYVALNFKYTYPEDSGTYTCRAVNELGEAV--- 400 (808)
Q Consensus 340 ~~~g~p~-~~v~W~-~~g~~---l~---------~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~--- 400 (808)
. ...|. +.+.|+ +||.. +. ...++.+..+ .+..+|.|.++..+|+|.|+|.|.|. |...
T Consensus 242 ~-~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~ 319 (585)
T 2ocw_A 242 G-PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGS 319 (585)
T ss_pred C-CCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccC
Confidence 1 22222 789997 88832 21 1334444432 45568999999999999999999995 5444
Q ss_pred --EEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchh
Q psy2145 401 --TSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGL 478 (808)
Q Consensus 401 --~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (808)
..+.|.|..++.+
T Consensus 320 ~~~~~~l~V~~~p~~----------------------------------------------------------------- 334 (585)
T 2ocw_A 320 PIQAWQLFVNEESTI----------------------------------------------------------------- 334 (585)
T ss_pred ceeeEEEEEeccccc-----------------------------------------------------------------
Confidence 6677777754322
Q ss_pred hhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEE----EEEE--CCE--ecCC-
Q psy2145 479 EKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKV----EWFR--NEK--PLED- 549 (808)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v----~W~k--~g~--~l~~- 549 (808)
...+... .+.+|+.+.|.|.+ .+.|.+.+ .|+| ||. .+..
T Consensus 335 ----------------------------~~~~~~~-~~~~G~~v~l~C~~--~~~p~p~i~~w~~W~~~~~g~~~~l~~~ 383 (585)
T 2ocw_A 335 ----------------------------PRSPTVV-KGVAGSSVAVLCPY--NRKESKSIKYWCLWEGAQNGRCPLLVDS 383 (585)
T ss_pred ----------------------------ccCCcce-EEEeCCcEEEEEec--CCCCCccEEEEEEEEccCCCCCceeeee
Confidence 2222222 57899999999999 79999877 7999 887 4432
Q ss_pred --------CCCeEEEe--eCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCccccccccccc
Q psy2145 550 --------SSRITTKH--DFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELE 619 (808)
Q Consensus 550 --------~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~ 619 (808)
..++.+.. ..+.++|.|.+++.+|+|.|+|.| |..|....++.|.|...+
T Consensus 384 ~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~------------------- 443 (585)
T 2ocw_A 384 EGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGE------------------- 443 (585)
T ss_pred cceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCc-------------------
Confidence 34555543 345567999999999999999999 999999999999997642
Q ss_pred CCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEe--eCCCCCeEEEEEECCEEccCCCc------EE-EEEe
Q psy2145 620 QPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVV--PVGDPTMRFEWFVNGVELKMGSR------FH-VQHD 690 (808)
Q Consensus 620 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~--~~g~P~p~i~W~~~g~~l~~~~~------~~-~~~~ 690 (808)
|.+.. .....+.+|+.+.|.|.+. +.|.|.|.|.|+|||..+..+.. +. +..+
T Consensus 444 ----------------p~~~~--~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~ 505 (585)
T 2ocw_A 444 ----------------PNLKV--PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDEN 505 (585)
T ss_pred ----------------ccccc--CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCc
Confidence 22221 2235688999999999993 12889999999999998864321 22 2223
Q ss_pred CCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE-EEEEEEeCCC
Q psy2145 691 FGYVTLDITKCVPADSGVYMCKAINRAGEAVSS-TSLKVKSKSD 733 (808)
Q Consensus 691 ~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s-~~l~V~~~p~ 733 (808)
+..++|.|.++..+|+|.|+|.|.|.+|...+. +.|.|..+|.
T Consensus 506 ~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p~ 549 (585)
T 2ocw_A 506 SRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERKA 549 (585)
T ss_pred ccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeeee
Confidence 456799999999999999999999999977654 9999999874
No 7
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=100.00 E-value=2.8e-53 Score=495.25 Aligned_cols=523 Identities=18% Similarity=0.263 Sum_probs=359.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec-------------------cCcEEEEeeCCeEEEEEc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI-------------------GHRFRPIHDFGYVALDII 113 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~-------------------~~r~~~~~~~~~~~L~I~ 113 (808)
...|..+ .+.+|++++|.|...+ .+...|.|||+...... ..|+.+.. ..+|.|.
T Consensus 3 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~~---~~sL~I~ 76 (642)
T 1e07_A 3 TIESTPF-NVAEGKEVLLLVHNLP--QHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP---NASLLIQ 76 (642)
T ss_pred eEeccCC-cccccccEEEEEccCC--CCceEEEEECCcccCCcceEEEEEccccccccCccccCceeecc---CCcEEEC
Confidence 3456677 8999999999999763 46679999994422110 11222221 2379999
Q ss_pred ccCcCCCeeEEEEEEecC-cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCc
Q psy2145 114 DTIPEDSGTYTCRAVNLV-GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKN 192 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 192 (808)
+++.+|+|.|+|.+.+.. +.....+.|.|... ..+|.|... ..
T Consensus 77 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~i~~~-~~ 120 (642)
T 1e07_A 77 NIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPE-----------------------------------LPKPSISSN-NS 120 (642)
T ss_pred CCCcccCcEEEEEEEcCCCeEEEEEEEEEeccc-----------------------------------CCCCcEEcc-Cc
Confidence 999999999999999863 44466777777532 234555443 34
Q ss_pred eeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeE-EEEE
Q psy2145 193 CEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQA-VTSG 271 (808)
Q Consensus 193 ~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~ 271 (808)
..+.+|+.+.|.|.+ .+ |.+.|.|+++|..+..+.++.+..+++ .|.|.+++.+|+|.|+|.|.|..|.. +..+
T Consensus 121 ~~v~~g~~v~l~C~~--~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~ 195 (642)
T 1e07_A 121 KPVEDKDAVAFTCEP--ET-QDATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSV 195 (642)
T ss_pred eeEecCCcEEEEEEC--CC-CCeeEEEEECCeECCCCCceEEcCCCC--EEEEeCCCcccCeeEEEEEecCCCCcccceE
Confidence 568899999999999 45 889999999999998888777655444 89999999999999999999988864 3457
Q ss_pred EEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEE
Q psy2145 272 NLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTW 351 (808)
Q Consensus 272 ~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W 351 (808)
.|.|...| +.....+....+.+|+.+.|.|.+ .|.|.+.|+|
T Consensus 196 ~l~V~~~p------------------------------------~~~~~~~~~~~~~~G~~~~l~C~~--~g~p~~~i~W 237 (642)
T 1e07_A 196 ILNVLYGP------------------------------------DAPTISPLNTSYRSGENLNLSCHA--ASNPPAQYSW 237 (642)
T ss_pred EEEEEeCC------------------------------------CCcEEecCCcccccCCEEEEEEEc--CCCCCcEEEE
Confidence 78876432 112223345667899999999998 7999999999
Q ss_pred EECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE--EEEEEEecccccccccchHHHhhhhcc
Q psy2145 352 LRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS--STLFVESKASLQLDTQNEAALQKIQNL 429 (808)
Q Consensus 352 ~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~ 429 (808)
+++|..+..+ ..|.|.++..+|+|.|+|.|.|..|....+ +.|.|...+..+.....+ ...+
T Consensus 238 ~~~g~~i~~~-----------~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~~-----~~~~ 301 (642)
T 1e07_A 238 FVNGTFQQST-----------QELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNN-----SNPV 301 (642)
T ss_pred EECCeEcccC-----------CceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEEcCC-----ceeE
Confidence 9999988432 259999999999999999999999876544 556665543221111000 0000
Q ss_pred ccccccccccceeeeecc-CCeeEEecCCCceeecC-------CceeEe--cccCCchhhhhcccccCCCCCCCCcCCCC
Q psy2145 430 EDTSRFKRKEEEEVEVTQ-QPSFTVQLNGPTELVEG-------EGTIIT--DTQHPKGLEKIRKLEDTEPHKRPEVDDNA 499 (808)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (808)
+. .......+.+.. ++.+.|..++....... ...+.. ......|.+.+...+..+..........
T Consensus 302 ~~----g~~v~l~C~~~~~p~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~- 376 (642)
T 1e07_A 302 ED----EDAVALTCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILN- 376 (642)
T ss_pred ec----CCcEEEEEECCCCCccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEE-
Confidence 00 011112222222 35666665543211111 111111 1122234444444333222111111111
Q ss_pred ccCCCe-eeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 500 TKQRPV-FTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 500 ~~~~P~-f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
+..+|. +...+.+. .+.+|+.+.|.|.+ .|.|.+.|+|+|||..+..+. .|.|.++..+|+|.|+
T Consensus 377 V~~~p~~~~~~~~~~-~~~~g~~~~l~C~~--~g~p~~~i~W~~~g~~~~~~~-----------~L~i~~~~~~d~G~Y~ 442 (642)
T 1e07_A 377 VLYGPDDPTISPSYT-YYRPGVNLSLSCHA--ASNPPAQYSWLIDGNIQQHTQ-----------ELFISNITEKNSGLYT 442 (642)
T ss_pred EEcCCCCCeecCCce-EecCCCcEEEEEEc--CccCCCeEEEEECCEEcCCCc-----------eEEEccCChhhCeEEE
Confidence 122332 23333333 57899999999999 899999999999999886432 6999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.|.|..|....+..+.|...... .+|.+.. .....+.+|+.++|.|
T Consensus 443 C~a~n~~g~~~~s~~~~v~v~~~~-------------------------------~~p~i~~--~~~~~v~~g~~v~l~C 489 (642)
T 1e07_A 443 CQANNSASGHSRTTVKTITVSAEL-------------------------------PKPSISS--NNSKPVEDKDAVAFTC 489 (642)
T ss_pred EEEEcCCCCCcccceEEEEEeccC-------------------------------CCceEec--CCceeecCCCeEEEEE
Confidence 999999998877755555442210 1344432 2234688999999999
Q ss_pred EEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE-EEEEEEEeCCC
Q psy2145 659 RVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVS-STSLKVKSKSD 733 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~p~ 733 (808)
.+ . .|.+.|.|+|||..|..+.++.+..++ .+|.|.++..+|+|.|+|.|.|..|...+ ++.|.|..+|.
T Consensus 490 ~~--~-~~~~~i~W~~~g~~l~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~ 560 (642)
T 1e07_A 490 EP--E-AQNTTYLWWVNGQSLPVSPRLQLSNGN--RTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPD 560 (642)
T ss_pred EC--C-CCCcEEEEEECCEeCCCCCcEEEcCCC--cEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCC
Confidence 99 5 488999999999999998888876554 48999999999999999999999998655 68999987664
No 8
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=1e-54 Score=494.57 Aligned_cols=452 Identities=16% Similarity=0.174 Sum_probs=328.6
Q ss_pred ccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEE
Q psy2145 48 FIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRA 127 (808)
Q Consensus 48 ~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 127 (808)
.+|.+...+.++ .+.+|+.++|.|.+. + .|.|+|+|..+. .++...+|.|.+++.+|+|.|+|.|
T Consensus 35 ~pP~i~~~~~~~-~v~~G~~v~l~C~~~--~----~v~W~~~~~~~~--------~~~~~~~L~I~~~~~~D~G~Y~C~a 99 (524)
T 2ec8_A 35 SPPSIHPGKSDL-IVRVGDEIRLLCTDP--G----FVKWTFEILDET--------NENKQNEWITEKAEATNTGKYTCTN 99 (524)
T ss_dssp CCCEEESCCSEE-ECCTTSCEEEEEECT--T----EEEEEEESSSCC--------EEECSSEEEESSCCSTTCEEEEEEE
T ss_pred CCCccCCCCceE-EEeCCCeEEEEEeCC--c----eEEEcCCCcccc--------ccCccceEEEcccchhhCEEEEEee
Confidence 445555566666 899999999999987 3 899999998772 1223348999999999999999999
Q ss_pred EecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 128 VNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 128 ~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
.| |. ..++.|.|.. +|.+...+.+..+.+|+.++|.|.+
T Consensus 100 ~n--g~-~~~~~l~V~~--------------------------------------p~~~~~~~~~~~v~~G~~v~l~C~~ 138 (524)
T 2ec8_A 100 KH--GL-SNSIYVFVRD--------------------------------------PAKLFLVDRSLYGKEDNDTLVRCPL 138 (524)
T ss_dssp TT--SC-EEEEEEECCC--------------------------------------SSCSBCCCCCCCEETTSCEEECCCB
T ss_pred cC--Cc-ceEEEEEECC--------------------------------------CCcccccccceEEEcCCeEEEECcC
Confidence 99 53 6666776642 3333356667888999999999999
Q ss_pred eecCCCCeEEEEee-CCEEccCCCceEEEecCceEEEEEccCCCCCcE-EEEEEEEeCceeEEE-EEEEEEeeCCccccc
Q psy2145 208 IPVSDNTMKVEWFH-NNVPIKSGSRFTETNNFGFVALDIMQCLPEDSG-VYTCRAVNALGQAVT-SGNLLVHSKKSIQTE 284 (808)
Q Consensus 208 ~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~n~~g~~~~-~~~l~V~~~~~i~~~ 284 (808)
.+.+.+.|.|++ ||..+..+.++.....+ .|.|.+++.+|+| .|+|.|.|..|...+ .+.|.|...
T Consensus 139 --~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~------ 207 (524)
T 2ec8_A 139 --TDPEVTNYSLKGCQGKPLPKDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPA------ 207 (524)
T ss_dssp --SCCCCSCEEEECSSSCCCCSSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECC------
T ss_pred --CCCccceEEEEccCCcCcCCCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeC------
Confidence 466668999998 89999877777665544 7999999999999 999999998776544 677777531
Q ss_pred ccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccE-EEEEECCEec--cCC
Q psy2145 285 TQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLK-VTWLRNGVPI--QAS 361 (808)
Q Consensus 285 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~-v~W~~~g~~l--~~~ 361 (808)
...+|.+...+....+.+|+.+.|.|.+ .|.|.+. +.|+++|..+ ...
T Consensus 208 ---------------------------~~~~p~i~~~~~~~~v~~G~~v~L~C~~--~g~p~p~~i~W~~~~~~~~~~~~ 258 (524)
T 2ec8_A 208 ---------------------------FKAVPVVSVSKASYLLREGEEFTVTCTI--KDVSSSVYSTWKRENSQTKLQEK 258 (524)
T ss_dssp ---------------------------CCSCCEEECSCSEEEEETTSCEEEEEEE--EESSTTCEEEEEETTCSCCCCEE
T ss_pred ---------------------------CCCCCcEEecCCcceEEcCCcEEEEEEE--ecCCCcEEEEEEeCCCCCccccc
Confidence 1247888888878889999999999999 6777776 9999999883 333
Q ss_pred CcEEEEe---eCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccc
Q psy2145 362 NRVSTMH---DFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRK 438 (808)
Q Consensus 362 ~~~~~~~---~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (808)
.+..+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.+...+.
T Consensus 259 ~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~-------------------- 318 (524)
T 2ec8_A 259 YNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPM-------------------- 318 (524)
T ss_dssp EEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEES--------------------
T ss_pred cccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecC--------------------
Confidence 3222221 12345899999999999999999999999998889999886543321000
Q ss_pred cceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccC
Q psy2145 439 EEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEE 518 (808)
Q Consensus 439 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~ 518 (808)
.+.. ..+.+
T Consensus 319 ----------------------------------------------------------------------~~~~-~~v~~ 327 (524)
T 2ec8_A 319 ----------------------------------------------------------------------INTT-VFVND 327 (524)
T ss_dssp ----------------------------------------------------------------------SCSE-EEECT
T ss_pred ----------------------------------------------------------------------CCce-EEEcC
Confidence 0011 25789
Q ss_pred CCceEEEEEEeeCCCCCcE-EEEEECCEecCCCC-CeEEEeeC----cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEE
Q psy2145 519 GKNAHFSCRLIPVGDPTLK-VEWFRNEKPLEDSS-RITTKHDF----GYVAMDLSHVRAEDEGIYICKATNALGEAVTTA 592 (808)
Q Consensus 519 G~~v~l~C~v~~~g~P~~~-v~W~k~g~~l~~~~-~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~ 592 (808)
|+.+.|.|.+ .|.|.+. |+|+|+|..+.... ++....++ ....|.|.+++.+|+|.|+|.|.|..|..+.++
T Consensus 328 G~~v~l~C~~--~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 405 (524)
T 2ec8_A 328 GENVDLIVEY--EAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAF 405 (524)
T ss_dssp TCCEEEEEEE--EEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred CCcEEEEEEE--eecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEE
Confidence 9999999999 7999999 99999999998765 44333332 345899999999999999999999999999999
Q ss_pred EEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEE
Q psy2145 593 SMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEW 672 (808)
Q Consensus 593 ~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W 672 (808)
.|.|..+ |.|..... +.+| .|.|.+ .|.|.|.|.|
T Consensus 406 ~l~V~~~------------------------------------P~i~~~~~----~~~g---~l~C~~--~g~P~p~i~W 440 (524)
T 2ec8_A 406 NVYVNTK------------------------------------PEILTYDR----LVNG---MLQCVA--AGFPEPTIDW 440 (524)
T ss_dssp EEEECEE------------------------------------EEEEEEEC----CSSS---CEEEEE--EEESCCEEEC
T ss_pred EEEEecC------------------------------------CeEeeccc----CcCc---EEEEEE--EeecCCEEEE
Confidence 9999865 44444332 4466 999999 7999999999
Q ss_pred EECCEEcc--------CCCcE---EEEEeCCEEE-EEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 673 FVNGVELK--------MGSRF---HVQHDFGYVT-LDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 673 ~~~g~~l~--------~~~~~---~~~~~~~~~~-L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
++||..+. .+.+. ....++.... +.|.....+|+|.|+|.|+|.+|.++.++.|.|+.++.
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~ 513 (524)
T 2ec8_A 441 YFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513 (524)
T ss_dssp CCC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-----
T ss_pred EECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCH
Confidence 99987662 11111 1111222222 22444446999999999999999999999999997754
No 9
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-53 Score=473.45 Aligned_cols=443 Identities=13% Similarity=0.152 Sum_probs=297.8
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcce
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFA 134 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 134 (808)
.+..+ +|.+|++++|.|.+. +.|...+.|++++..+.....+.. .+.+..+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 54 ~~~~~-~v~~g~~~~L~c~~~--~~~~~~~~W~~~~~~l~~~~~~~~-~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~ 129 (527)
T 3qs9_E 54 EAAAV-EVDVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNY 129 (527)
T ss_dssp --CEE-EECSSCCEEEEEECS--CCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEE
T ss_pred eeeeE-EEeccccEEEEEEEe--cCCceeEEEEecCCccCcccccCC-CcceEEEEEECcCChhhCeeEEEEEEeccccE
Confidence 34456 899999999999998 467789999999998876655542 23355679999999999999999999998877
Q ss_pred EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC
Q psy2145 135 EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT 214 (808)
Q Consensus 135 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~ 214 (808)
.....|.|.... +...........|+.+.|.|.+ .|.|.
T Consensus 130 ~~~~~v~v~~~~---------------------------------------~~~~~~p~~~~~~~~~~L~C~a--~G~P~ 168 (527)
T 3qs9_E 130 TILFTVSIRNTL---------------------------------------LYTLRRPYFRKMENQDALVCIS--ESVPE 168 (527)
T ss_dssp EEEEEEEEC--------------------------------------------CEEEEEEEECSSSSCEEEEE--EESSC
T ss_pred EEEEEEEECCce---------------------------------------eeccCCCcEEecCCceEEEEEE--ceecC
Confidence 777777664110 0011112223457778999999 68999
Q ss_pred eEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEE-EEEEEeeCCcccccccccchhhh
Q psy2145 215 MKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTS-GNLLVHSKKSIQTETQHGESLSR 293 (808)
Q Consensus 215 ~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~i~~~~~~~~~~~~ 293 (808)
+.|.|++++..+..... ...+...+.+..+..+|+|.|+|.|.|..|..... +.|.|..
T Consensus 169 P~i~W~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~---------------- 228 (527)
T 3qs9_E 169 PIVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ---------------- 228 (527)
T ss_dssp CEEEEEEC-----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS----------------
T ss_pred CeEEEEECCCCCccccc----cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEec----------------
Confidence 99999998877642211 11111233444556899999999999999987664 5666543
Q ss_pred hhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEe-----
Q psy2145 294 LQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMH----- 368 (808)
Q Consensus 294 ~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~----- 368 (808)
+|.+ ++....+.+|+.+.|.|.+. .|.|.+.|+|+++|..+.....+....
T Consensus 229 ---------------------~p~~--~p~~~~v~~G~~v~L~C~~~-~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~ 284 (527)
T 3qs9_E 229 ---------------------TPQT--TLPQLFLKVGEPLWIRCKAV-HVNHGFGLTWELENKALEEGNYFEMSTYSTNR 284 (527)
T ss_dssp ---------------------CCCC--SCCEEEECTTSCEEEEEEEE-ESSSCCCEEEECSSSCCCGGGEEEEEEEETTT
T ss_pred ---------------------cCcc--CCCceEEeCCCeEEEEEEEc-cCCCCeEEEEEECCEECCCCceeeeeeeccCc
Confidence 3333 44567889999999999983 289999999999999887654332211
Q ss_pred -eCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeecc
Q psy2145 369 -DFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQ 447 (808)
Q Consensus 369 -~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (808)
.....+|.|.++..+|+|.|+|.|.|. ...++.|.|..++.+...
T Consensus 285 ~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~------------------------------- 330 (527)
T 3qs9_E 285 TMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINAT------------------------------- 330 (527)
T ss_dssp EEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECC-------------------------------
T ss_pred ceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccc-------------------------------
Confidence 112246999999999999999999997 566677887754322100
Q ss_pred CCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEE
Q psy2145 448 QPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCR 527 (808)
Q Consensus 448 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~ 527 (808)
+......+.+|+.+.|.|.
T Consensus 331 -------------------------------------------------------------~~~~~~~v~~G~~v~L~C~ 349 (527)
T 3qs9_E 331 -------------------------------------------------------------NSSEDYEIDQYEEFCFSVR 349 (527)
T ss_dssp -------------------------------------------------------------CSCCEECCCTTCCCCEEEE
T ss_pred -------------------------------------------------------------cCcccEEEcCCCeEEEEEE
Confidence 0000125788999999999
Q ss_pred EeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEeccccccccc
Q psy2145 528 LIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQ 607 (808)
Q Consensus 528 v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~ 607 (808)
+ .|.|.|.|+|+|||+.|..+.++.. .++ .|.|.+++.+|+|.|+|.|.|..|....++.|.|..+
T Consensus 350 ~--~g~P~p~i~W~k~g~~l~~~~~~~~--~~~--~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~-------- 415 (527)
T 3qs9_E 350 F--KAYPQIRCTWTFSRKSFPCEQKGLD--NGY--SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK-------- 415 (527)
T ss_dssp E--EEESCCEEEEEETTEEEECBCCBCS--SSS--EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CC--------
T ss_pred E--EecCCCEEEEEECCEECcCCccccc--CCc--EEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecC--------
Confidence 9 7999999999999999976655321 222 7999999999999999999999999999999999864
Q ss_pred CcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCc---
Q psy2145 608 HPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSR--- 684 (808)
Q Consensus 608 ~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~--- 684 (808)
|.|..... | ..|.|.+ .|+|.|.|.|++++..+.....
T Consensus 416 ----------------------------P~i~~~~~-------~--~~l~C~a--~g~P~p~i~W~~~~~~~~~~~~~~~ 456 (527)
T 3qs9_E 416 ----------------------------PQVLAEAS-------A--SQASCFS--DGYPLPSWTWKKCSDKSPNCTEEIT 456 (527)
T ss_dssp ----------------------------CEEEECCC-------C--E---EEE--ECSSCCEEEEECCC-----CCCCCC
T ss_pred ----------------------------CeEEEeCC-------C--CEEEEEE--EEEcCCeEEEEECCCCcCCCccccc
Confidence 55544321 2 3579999 7999999999998765421110
Q ss_pred ---E-----EEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCc
Q psy2145 685 ---F-----HVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 685 ---~-----~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
. ..........+.|.-...+|+|.|+|.|.|.+|.++.++.|.|.++-.+
T Consensus 457 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G~~~~~~~L~V~~p~~~ 514 (527)
T 3qs9_E 457 EGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPF 514 (527)
T ss_dssp CCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSCEEEEEEEC--------
T ss_pred cccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCCCceeEEEEecCCCcee
Confidence 0 0011111223333333356999999999999999999999988765433
No 10
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=2.1e-55 Score=525.20 Aligned_cols=500 Identities=15% Similarity=0.197 Sum_probs=85.2
Q ss_pred ccccccccccceeeeccCCCchhhhhhh---cc-CCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCE
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAK---KK-KNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGR 91 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~---~~-~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~ 91 (808)
+..++.+|.|.|.|.+.+.......... .. .......+..+..+ .+.+|+.++|.|.+.+...|.+.|.|+++|.
T Consensus 187 i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~~~~~~v~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~ 265 (772)
T 3v2a_R 187 IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGI-ELSVGEKLVLNCTARTELNVGIDFNWEYPSS 265 (772)
T ss_dssp EEGGGTTTCSEEEEEEEETTEEEECCEEEEEEECCCEEEEEEECCSCE-EEETTCCEEEEEEEEECTTCCCEEEEECC--
T ss_pred ecCCChhhCeEEEEEEEECCceEEEEEEEEEEecCccceeeeCCCCce-EEecCCcEEEEEEEecCCCCceeEEEecCCc
Confidence 4557788999999999865432221111 11 11122233334445 7899999999999996446678999999998
Q ss_pred EeeccCcEEE--------EeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeee
Q psy2145 92 PVTIGHRFRP--------IHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQY 163 (808)
Q Consensus 92 ~l~~~~r~~~--------~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~ 163 (808)
.+........ .......+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p----------------- 328 (772)
T 3v2a_R 266 KHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKP----------------- 328 (772)
T ss_dssp ------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCC-----------------
T ss_pred cCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCC-----------------
Confidence 8765433321 112234589999999999999999999999988888888886432
Q ss_pred eccccccccccccccccCCCCeEEee---cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCce
Q psy2145 164 LEDKSKYQRGEYIEETTTQAPIFTTS---LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGF 240 (808)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~P~~~~~---~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~ 240 (808)
.+... +....+.+|+.++|.|.+ .+.|.+.|.|+|+|..+....++. +.
T Consensus 329 ---------------------~~~~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~g~~l~~~~~~~-----~~ 380 (772)
T 3v2a_R 329 ---------------------FVAFGSGMESLVEATVGERVRIPAKY--LGYPPPEIKWYKNGIPLESNHTIK-----AG 380 (772)
T ss_dssp ---------------------C----------------------------------------------------------
T ss_pred ---------------------eeEeccCCCCcEEEcCCCcEEEEEEE--eeeCCCeEEEEECCEeCCCCceEc-----cc
Confidence 22222 235678899999999999 578889999999999987643322 22
Q ss_pred EEEEEccCCCCCcEEEEEEEEeCceeEEE--EEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee
Q psy2145 241 VALDIMQCLPEDSGVYTCRAVNALGQAVT--SGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF 318 (808)
Q Consensus 241 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~--~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~ 318 (808)
..|.|.++..+|+|.|+|.|.|..|.... .+.|.|.. +|.+
T Consensus 381 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~-------------------------------------~P~~ 423 (772)
T 3v2a_R 381 HVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYV-------------------------------------PPQI 423 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEec-------------------------------------CCcc
Confidence 38999999999999999999999887644 44555543 3333
Q ss_pred ccC---CCceEeecCCeEEEEEEEeecCCCccE-EEEEECCEe--------------------------------ccCC-
Q psy2145 319 TQP---MRDIHVAENQAAHFEARLIPVGDSKLK-VTWLRNGVP--------------------------------IQAS- 361 (808)
Q Consensus 319 ~~~---~~~~~v~~G~~~~l~C~~~~~g~p~~~-v~W~~~g~~--------------------------------l~~~- 361 (808)
... .....+.+|+.+.|.|.+ .|.|.+. |+|++++.. +...
T Consensus 424 ~~~~~~~~~~~~~~g~~~~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~ 501 (772)
T 3v2a_R 424 GEKSLISPVDSYQYGTTQTLTCTV--YAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNK 501 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCccccCCCCcEEEEeEe--ccCCCCcEEEEEEcCCccccccccccccccCcCccccccccccccCCCcEEEec
Confidence 211 111237889999999999 7889886 999997432 1111
Q ss_pred CcEEEEee--CcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhcccccccccccc
Q psy2145 362 NRVSTMHD--FGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKE 439 (808)
Q Consensus 362 ~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (808)
.+.....+ .....|.|.++ +|+|.|+|.|.|..|.....+.|.|..++.+.
T Consensus 502 ~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i~------------------------- 554 (772)
T 3v2a_R 502 NQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGPEIT------------------------- 554 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCceee-------------------------
Confidence 11111111 12246778776 79999999999999988888888887543221
Q ss_pred ceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCC
Q psy2145 440 EEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEG 519 (808)
Q Consensus 440 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G 519 (808)
..+. ..+.+|
T Consensus 555 --------------------------------------------------------------------~~p~--~~~~~G 564 (772)
T 3v2a_R 555 --------------------------------------------------------------------LQPD--MQPTEQ 564 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------ccCC--cccccC
Confidence 1111 136789
Q ss_pred CceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEE--------------------EeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 520 KNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITT--------------------KHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 520 ~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~--------------------~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
+.+.|.|.+ .|.|.+.|.|+|+|..+........ ....+...|.|.++..+|+|.|+|
T Consensus 565 ~~v~l~C~~--~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 642 (772)
T 3v2a_R 565 ESVSLWCTA--DRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVC 642 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEec--cCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEE
Confidence 999999999 7999999999999977654322111 111223469999999999999999
Q ss_pred EEEeCCeeEEE--EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 580 KATNALGEAVT--TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 580 ~a~N~~G~~~~--s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
.|.|..|.... ...|.|... .+|.|...+.. ..+.+|+.++|.
T Consensus 643 ~a~n~~~~~~~s~~~~l~v~~~----------------------------------~~P~~~~~~~~-~~v~~g~~~~l~ 687 (772)
T 3v2a_R 643 LAQDRKTKKRHCVVRQLTVLER----------------------------------VAPTITGNLEN-QTTSIGESIEVS 687 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEeCCCCeEEEEEEeeccccc----------------------------------CCCEeecCCCc-eEEeCCCCEEEE
Confidence 99997665443 344555321 24666665543 578899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCcccc
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
|.+ .|.|.|.|.|+|||.+|..+.++.+..+ ..+|.|.++..+|+|.|+|.|.|.+|.++.++.|.|.++|.....
T Consensus 688 C~~--~g~P~p~v~W~k~g~~l~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~p~~~~~ 763 (772)
T 3v2a_R 688 CTA--SGNPPPQIMWFKDNETLVEDSGIVLKDG--NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEKTNL 763 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEe--CccCCCeEEEEECCeECcCCCCeEEcCC--CcEEEECcCCHHHCEEEEEEEEeCCcceeEEEEEEEECCCCcccc
Confidence 999 7999999999999999998877766543 358999999999999999999999999999999999999876654
Q ss_pred C
Q psy2145 738 S 738 (808)
Q Consensus 738 ~ 738 (808)
.
T Consensus 764 ~ 764 (772)
T 3v2a_R 764 E 764 (772)
T ss_dssp -
T ss_pred c
Confidence 3
No 11
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=2.8e-51 Score=466.22 Aligned_cols=463 Identities=16% Similarity=0.211 Sum_probs=321.4
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EEe---e---------ccCcEEEEeeCCeEEEEEcccCc
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RPV---T---------IGHRFRPIHDFGYVALDIIDTIP 117 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~l---~---------~~~r~~~~~~~~~~~L~I~~~~~ 117 (808)
++..|.++ .+.+|++++|.|.+. +.|.+.|.|||++ ..+ . ...|+....+++..+|.|.+++.
T Consensus 3 v~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (523)
T 2rcj_C 3 VLTQPPSA-SGTPGQRVTISCTGT--SSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEA 79 (523)
T ss_pred ccccCCce-EEecCCcEEEEEEEe--ccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCCh
Confidence 35668888 899999999999998 4678899999974 221 1 13577655556777999999999
Q ss_pred CCCeeEEEEEEecCcce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCcee
Q psy2145 118 EDSGTYTCRAVNLVGFA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCE 194 (808)
Q Consensus 118 ~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 194 (808)
+|+|.|+|.|.|..|.. ...+.|.|.... ..+|.+...+....
T Consensus 80 ~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~----------------------------------~~~P~~~~~~~~~~ 125 (523)
T 2rcj_C 80 EDESDYYCASWNSSDNSYVFGTGTKVTVLGQP----------------------------------KANPTVTLFPPSSE 125 (523)
T ss_pred hhCEEEEEEEccCCCccccccCceEEEeccCC----------------------------------CcCCeEEecCCccc
Confidence 99999999999987632 345667664221 35777777777777
Q ss_pred ecCCCeEEEEEEEeecCCCC--eEEEEeeCCEEccCCCceEE--EecCce----EEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 195 IKEGQRAHFECRLIPVSDNT--MKVEWFHNNVPIKSGSRFTE--TNNFGF----VALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 195 v~~G~~v~L~C~~~~~~~p~--~~v~W~~~g~~l~~~~~~~~--~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
+.+|+.++|.|.+. +.|+ +.|.|+|||.++..+.++.. ...++. ..|.|.++..+|+|.|+|.|.|..|.
T Consensus 126 ~~~g~~v~l~C~~~--g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 203 (523)
T 2rcj_C 126 ELQANKATLVCLIS--DFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGST 203 (523)
T ss_pred ccCCCceEEEEEec--cccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcc
Confidence 78999999999994 5543 49999999999876543321 112222 36999999999999999999998887
Q ss_pred EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCC-C
Q psy2145 267 AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGD-S 345 (808)
Q Consensus 267 ~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p 345 (808)
...++.+.+... ...+|.+........+.+|+.+.|.|.+ .|. |
T Consensus 204 ~~~~~~~~~~~~---------------------------------~~~~P~v~~~~~~~~~~~G~~~~l~C~~--~g~~P 248 (523)
T 2rcj_C 204 VEKTVAPTECSA---------------------------------STKGPSVFPLAPSSKSTSGGTAALGCLV--KDYFP 248 (523)
T ss_pred cccceeeeecCC---------------------------------CCcCCEEEecCCCcccccCCceEEEEEE--eceeC
Confidence 665555433210 1234554433333456799999999998 565 7
Q ss_pred cc-EEEEEECCEeccCCCcEEEEeeCc----EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccch
Q psy2145 346 KL-KVTWLRNGVPIQASNRVSTMHDFG----YVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNE 420 (808)
Q Consensus 346 ~~-~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~ 420 (808)
.+ .|+|+++|..+...........++ ...|.|.++..+| |.|+|.|.|..|.....+.|.|...|
T Consensus 249 ~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P--------- 318 (523)
T 2rcj_C 249 QPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLP--------- 318 (523)
T ss_pred CCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCc---------
Confidence 66 899999998764321111112222 2479999999999 99999999999987666555543221
Q ss_pred HHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCc
Q psy2145 421 AALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNAT 500 (808)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (808)
T Consensus 319 -------------------------------------------------------------------------------- 318 (523)
T 2rcj_C 319 -------------------------------------------------------------------------------- 318 (523)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC----cEEEEEECCEecCCCCCeEE-EeeCcE----EEEEECCCCC
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT----LKVEWFRNEKPLEDSSRITT-KHDFGY----VAMDLSHVRA 571 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~----~~v~W~k~g~~l~~~~~~~~-~~~~~~----~~L~I~~v~~ 571 (808)
+.++.++.....+.+|+.+.|.|.+ .|.|+ +.|+|+|||..+........ ...++. ..|.|.++..
T Consensus 319 ---~~~~~~p~~~~~v~~g~~~~l~C~~--~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 393 (523)
T 2rcj_C 319 ---SVFLFPPKPKDTLMISRTPEVTCVV--VDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNW 393 (523)
T ss_pred ---eEEecCCCchhhcccCCceEEEEEE--ecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHh
Confidence 1112222222137889999999999 56543 69999999999876543221 122222 3599999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|....+..|.+... ...+|.+.........+..|
T Consensus 394 ~d~G~Y~C~a~n~~~~~~~~~~~~~~~~--------------------------------~~~~P~v~~~~~~~~~~~~~ 441 (523)
T 2rcj_C 394 LDGKEYKCKVSNKALPAPIEKTISKAKG--------------------------------QPREPQVYTLPPSREEMTKN 441 (523)
T ss_pred cCCCeEEEEEeCCCCCCceeEEEEcccC--------------------------------CCCCCEEEEeCCChHHccCC
Confidence 9999999999999887766555553210 01246555544433334445
Q ss_pred ceEEEEEEEeeCCCCCe--EEEEEECCEEccCCCcEEE--EEeCCE---EEEEEccCCCCCcEEEEEEEEeCCc
Q psy2145 652 QSAHYDCRVVPVGDPTM--RFEWFVNGVELKMGSRFHV--QHDFGY---VTLDITKCVPADSGVYMCKAINRAG 718 (808)
Q Consensus 652 ~~v~l~C~v~~~g~P~p--~i~W~~~g~~l~~~~~~~~--~~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G 718 (808)
+ ++|.|.+ .|.|+| .|.|+|||.++.......+ ..++.+ +.|.|.....+|+|.|+|.|.|...
T Consensus 442 ~-~~l~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~~~l~v~~~~~~~~g~Y~C~a~n~~l 512 (523)
T 2rcj_C 442 Q-VSLTCLV--KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 512 (523)
T ss_pred c-eEEEEEE--EeeECCCCEEEEEECCEECCCeeeccceeCCCCCEEEEEEEEEChHHccCCCeEEEEEEcCCc
Confidence 4 9999999 687665 9999999999975433322 223322 3456666666789999999999864
No 12
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=4e-51 Score=455.84 Aligned_cols=421 Identities=15% Similarity=0.164 Sum_probs=302.1
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCCCCceE-----EEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTDSNLKV-----EWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v-----~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
..|.++ .+.+|++++|.|.+. + |.+.+ .|+|++..+.. . ...+|.|.+++. |+| |+|.|.
T Consensus 4 ~~P~~~-~v~~G~~v~L~C~~~--g-p~p~~~~~~~~w~k~~~~~~~-~--------~~~~l~i~~v~~-d~g-Y~C~a~ 68 (450)
T 1z7z_I 4 VSPSKV-ILPRGGSVLVTCSTS--C-DQPMLLGIETPLPKKELLLPG-N--------NRKVYELSNVQE-DSQ-PMCYSN 68 (450)
T ss_dssp EESSEE-EEETTEEEEEEEECC--S-SCCCEEEECSSSCEEECCSST-T--------TEEEEEEEEECS-CBC-CEEEEE
T ss_pred cCCCce-EEecCCcEEEEEEcc--C-CCcccccccceeeecceEecC-C--------CceEEEEEeccc-CCe-eEEEEe
Confidence 457777 899999999999998 4 67778 99998875532 2 223799999987 999 999998
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..+.....+.|.|.. .|..+...+.+..+.+|++++|.|.+
T Consensus 69 ~~~~~~~~~~~l~V~~-------------------------------------~P~~~~~~~~~~~v~~G~~v~L~C~~- 110 (450)
T 1z7z_I 69 CPDGQSTAKTFLTVYW-------------------------------------TPERVELAPLPSWQPVGKNLTLRCQV- 110 (450)
T ss_dssp ETTEEEEEECEEEEEB-------------------------------------CCSEEEECCCCSEECTTSEEEEEEEE-
T ss_pred CCCCcceeEEEEEEEe-------------------------------------CCCcceecCCCceEeeCCeEEEEEEe-
Confidence 8777777788888852 23334456677889999999999999
Q ss_pred ecCCCCe---EEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE--------EEEEEEee
Q psy2145 209 PVSDNTM---KVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT--------SGNLLVHS 277 (808)
Q Consensus 209 ~~~~p~~---~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~--------~~~l~V~~ 277 (808)
.+.|++ .|.|+|+|.++...... ......+|.|.++..+|+|.|+|.|.|..|.... ...|.|..
T Consensus 111 -~g~~~~~~~~v~W~k~g~~l~~~~~~---~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~ 186 (450)
T 1z7z_I 111 -EGGAPRANLTVVLLRGEKELKREPAV---GEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFV 186 (450)
T ss_dssp -ECCBCGGGEEEEEEETTEEEEEEECC---TTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECC
T ss_pred -cCCCCCcCcEEEEeeCCEEeeccccc---ccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeec
Confidence 466666 99999999998654321 1233458999999999999999999998764322 22333322
Q ss_pred CCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCC-C--ccEEEEEEC
Q psy2145 278 KKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGD-S--KLKVTWLRN 354 (808)
Q Consensus 278 ~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p--~~~v~W~~~ 354 (808)
. ...+|.+..+ ..+.+|+.+.|.|.+ .|. | .+.+.|+++
T Consensus 187 ~---------------------------------~~~~p~~~~~---~~v~~G~~v~l~C~~--~g~~P~~~~~~~W~~~ 228 (450)
T 1z7z_I 187 L---------------------------------PATPPQLVSP---RVLEVDTQGTVVCSL--DGLFPVSEAQVHLALG 228 (450)
T ss_dssp C---------------------------------CSSCCEEECC---SEEETTSEEEEEEEE--ESCTTGGGCEEEEEET
T ss_pred c---------------------------------CCCCCEecCc---eeEEeCCcEEEEEEe--eCCCCCCceEEEEeCC
Confidence 1 0124444332 678899999999999 677 7 799999999
Q ss_pred CEeccCCCcEEEEeeCcEEEEEEccCCCCCCe--EEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccc
Q psy2145 355 GVPIQASNRVSTMHDFGYVALNFKYTYPEDSG--TYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDT 432 (808)
Q Consensus 355 g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G--~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (808)
|..+.. ++....+.....+.+ ++..+|+| .|+|.|.|..|.....+.|.|...+.
T Consensus 229 ~~~~~~--~~~~~~~~~~~~~~~-~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~-------------------- 285 (450)
T 1z7z_I 229 DQRLNP--TVTYGNDSFSAKASV-SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPA-------------------- 285 (450)
T ss_dssp TEECCC--EEEEETTEEEEEEEE-ECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCC--------------------
T ss_pred CEeCCc--eEEecCCceeEEEEE-EeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCC--------------------
Confidence 998876 333322211112233 78899999 99999999999988888888875321
Q ss_pred cccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCC
Q psy2145 433 SRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQN 512 (808)
Q Consensus 433 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~ 512 (808)
|.|... +
T Consensus 286 -----------------------------------------------------------------------p~i~~~--~ 292 (450)
T 1z7z_I 286 -----------------------------------------------------------------------PNVILT--K 292 (450)
T ss_dssp -----------------------------------------------------------------------CEEEES--C
T ss_pred -----------------------------------------------------------------------CeEecC--C
Confidence 222211 1
Q ss_pred cccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCe----eE
Q psy2145 513 IDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALG----EA 588 (808)
Q Consensus 513 ~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G----~~ 588 (808)
. .+.+|+.+.|.|.+ . |.+.++| +|.++.... ....|.|.++..+|+|.|+|.|.|..| ..
T Consensus 293 ~-~v~~G~~v~l~C~~--~--p~p~i~W--~g~~~~~~~--------~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~ 357 (450)
T 1z7z_I 293 P-EVSEGTEVTVKCEA--H--PRAKVTL--NGVPAQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHK 357 (450)
T ss_dssp S-EEETTCEEEEEEEC----------------------C--------CCCCEEEECCGGGTTCEEEEEEEEEETTEEEEE
T ss_pred e-eEeCCCcEEEEEec--C--CCCEeEE--CCEEcCCCC--------ceEEEEEecCcccCCceEEEEEEcCCCCccccc
Confidence 1 57899999999998 4 8999999 888773211 122699999999999999999997665 44
Q ss_pred EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec-CCCccccCCceEEEEEEEeeCCCCC
Q psy2145 589 VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL-TGTSEIMEGQSAHYDCRVVPVGDPT 667 (808)
Q Consensus 589 ~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~v~~G~~v~l~C~v~~~g~P~ 667 (808)
..++.|.|...|.+.. .. .....+.+|+.++|.|.+ .|+|.
T Consensus 358 ~~~~~l~V~~~P~~~~------------------------------------~~~p~~~~~~~g~~~~l~C~~--~g~P~ 399 (450)
T 1z7z_I 358 NQTRELRVLYGPRLDE------------------------------------RDCPGNWTWPENSQQTPMCQA--WGNPL 399 (450)
T ss_dssp EEEEECEEEEEEECCS------------------------------------TTSCSEEEEETTCEECCCCCC--EEESC
T ss_pred ceeEEEEEecCCceee------------------------------------ccCCCceeEcCCCeEEEEEec--ccCCC
Confidence 4778888887655421 11 112357889999999999 79999
Q ss_pred eEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 668 MRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 668 p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
|.|.|+|||..+..++. .| ++..+|+|.|+|.|.|.+|.++.++.|.|..+
T Consensus 400 p~i~W~~~g~~~~~~g~----------~~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 400 PELKCLKDGTFPLPIGE----------SV---TVTRDLEGTYLCRARSTQGEVTREVTVNVLSP 450 (450)
T ss_dssp CEEEEEETTTEECCTTS----------CE---ECCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CcEEEEECCcccCCCCC----------eE---eEehhhCeEEEEEEEeCCCceeEEEEEEEEcC
Confidence 99999999985544322 12 57889999999999999999999999999864
No 13
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=100.00 E-value=3.9e-51 Score=488.38 Aligned_cols=502 Identities=14% Similarity=0.167 Sum_probs=125.1
Q ss_pred ccccccccccceeeeccCCCchhhhhhhccCCccceee----cCCCCccccCCC--CcEEEEEEEeeCCCCCceEEEEeC
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTV----TKPKSIENLRER--GHAHFECKLEPVTDSNLKVEWFKN 89 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~v~~G--~~v~l~C~~~~~~~p~~~v~W~~~ 89 (808)
+..++.+|.|.|.|.+................. .+++ ..|..+ .+.+| +.++|.|.+. .|.+.|.|+|+
T Consensus 90 I~~~~~~d~G~Y~C~~~~~~~~~~~~v~v~~~~-~~~~~~~~~~~~~~-~v~~G~~~~v~L~C~~~---~p~~~v~w~~~ 164 (772)
T 3v2a_R 90 IPKVIGNDTGAYKCFYRETDLASVIYVYVQDYR-SPFIASVSDQHGVV-YITENKNKTVVIPCLGS---ISNLNVSLCAR 164 (772)
T ss_dssp -------------------------------------------CEEEE-EEESSCCCEEEECCCCS---CSSCCEEEEEE
T ss_pred ECCCcHhhCEeEEEEEcCCCEEEEEEEEECCCC-CCceEcCcccceeE-EEecCCCCeEEEEccCC---CCCcEEEEEec
Confidence 455778899999999873221111111111011 1111 234445 78899 8999999997 37789999997
Q ss_pred --CEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEE-EEEEEecCCCccccccccccceeeeeecc
Q psy2145 90 --GRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQ-ATLQCRGSAGILTSTQNETGLEQIQYLED 166 (808)
Q Consensus 90 --g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~ 166 (808)
|..+..+.+....... ..|.|.+++.+|+|.|+|.+.+..+...+. ..+.+..
T Consensus 165 ~~~~~~~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~s~~~~~~v~~---------------------- 220 (772)
T 3v2a_R 165 YPEKRFVPDGNRISWDSK--KGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG---------------------- 220 (772)
T ss_dssp TTTEEECCCSSSCEEETT--TEEEEEGGGTTTCSEEEEEEEETTEEEECCEEEEEEEC----------------------
T ss_pred CCCccccCCCceeecCCC--CCeEecCCChhhCeEEEEEEEECCceEEEEEEEEEEec----------------------
Confidence 6665544332222222 269999999999999999999864432222 2232221
Q ss_pred ccccccccccccccCCCCeEEeecC-ceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEE--------ec
Q psy2145 167 KSKYQRGEYIEETTTQAPIFTTSLK-NCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTET--------NN 237 (808)
Q Consensus 167 ~~~~~~~~~~~~~~~~~P~~~~~~~-~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~--------~~ 237 (808)
..+|.+...+. ...+.+|++++|.|.+.+...+.+.+.|+++|..+......... ..
T Consensus 221 --------------~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (772)
T 3v2a_R 221 --------------YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMK 286 (772)
T ss_dssp --------------CCEEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCE
T ss_pred --------------CccceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccce
Confidence 12334444444 47899999999999996544667899999999887554333211 11
Q ss_pred CceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCe
Q psy2145 238 FGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPV 317 (808)
Q Consensus 238 ~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~ 317 (808)
....+|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|.+..
T Consensus 287 ~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~---------------------------------- 332 (772)
T 3v2a_R 287 KFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAF---------------------------------- 332 (772)
T ss_dssp EEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-------------------------------------
T ss_pred EEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEe----------------------------------
Confidence 1334799999999999999999999999888888898876442210
Q ss_pred eccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 318 FTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 318 ~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
.........+.+|+.+.|.|.+ .|.|.+.|.|+++|..+....++. +...|.|.++..+|+|.|+|.|.|..|
T Consensus 333 ~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~g~~l~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g 405 (772)
T 3v2a_R 333 GSGMESLVEATVGERVRIPAKY--LGYPPPEIKWYKNGIPLESNHTIK-----AGHVLTIMEVSERDTGNYTVILTNPIS 405 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCcEEEcCCCcEEEEEEE--eeeCCCeEEEEECCEeCCCCceEc-----cceeEEEecCChhcCceEEEEEEECCc
Confidence 0011234567899999999999 788999999999999887643322 234799999999999999999999988
Q ss_pred ceEEE--EEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCC
Q psy2145 398 EAVTS--STLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHP 475 (808)
Q Consensus 398 ~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (808)
....+ +.|.|..+|.+...
T Consensus 406 ~~~~s~~~~l~v~~~P~~~~~----------------------------------------------------------- 426 (772)
T 3v2a_R 406 KEKQSHVVSLVVYVPPQIGEK----------------------------------------------------------- 426 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEEEEEEEecCCccccc-----------------------------------------------------------
Confidence 76443 45555543322100
Q ss_pred chhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEECCEe--------
Q psy2145 476 KGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFRNEKP-------- 546 (808)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k~g~~-------- 546 (808)
. ... ....+.+|+.+.|.|.+ .|.|.+. |+|++++..
T Consensus 427 -----------------------------~-~~~--~~~~~~~g~~~~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~~~ 472 (772)
T 3v2a_R 427 -----------------------------S-LIS--PVDSYQYGTTQTLTCTV--YAIPPPHHIHWYWQLEEECANEPSQ 472 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------c-cCC--CccccCCCCcEEEEeEe--ccCCCCcEEEEEEcCCccccccccc
Confidence 0 000 00136789999999999 8999997 999997432
Q ss_pred ------------------------cCCC-CCeEEEee--CcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEec
Q psy2145 547 ------------------------LEDS-SRITTKHD--FGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 547 ------------------------l~~~-~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~ 599 (808)
+... .++..... .....|.|.++ +|+|.|+|.|.|..|....++.|.|...
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 550 (772)
T 3v2a_R 473 AVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRG 550 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECC
Confidence 1110 11111111 11246888876 7999999999999999999999888864
Q ss_pred ccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEc
Q psy2145 600 AGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVEL 679 (808)
Q Consensus 600 ~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l 679 (808)
+.+ ...+. ..+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+
T Consensus 551 p~i------------------------------------~~~p~--~~~~~G~~v~l~C~~--~~~p~~~v~W~k~~~~~ 590 (772)
T 3v2a_R 551 PEI------------------------------------TLQPD--MQPTEQESVSLWCTA--DRSTFENLTWYKLGPQP 590 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cee------------------------------------eccCC--cccccCCceEEEEec--cCCCCCCcEEEEcCCcc
Confidence 332 22221 347789999999999 79999999999999877
Q ss_pred cCCCcEEE--------------------EEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE--EEEEEE--EeCCCcc
Q psy2145 680 KMGSRFHV--------------------QHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVS--STSLKV--KSKSDIV 735 (808)
Q Consensus 680 ~~~~~~~~--------------------~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~--s~~l~V--~~~p~~~ 735 (808)
........ ....+..+|.|.++..+|+|.|+|.|.|..|.... .+.|.| ..+|.+.
T Consensus 591 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~ 670 (772)
T 3v2a_R 591 LPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTIT 670 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEee
Confidence 54332221 11223456999999999999999999997665432 344554 4566554
Q ss_pred c
Q psy2145 736 S 736 (808)
Q Consensus 736 ~ 736 (808)
.
T Consensus 671 ~ 671 (772)
T 3v2a_R 671 G 671 (772)
T ss_dssp -
T ss_pred c
Confidence 3
No 14
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=6.2e-48 Score=420.02 Aligned_cols=372 Identities=23% Similarity=0.428 Sum_probs=279.5
Q ss_pred CCCCeEEeecCceee---cCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccC-CCCCcEEE
Q psy2145 181 TQAPIFTTSLKNCEI---KEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQC-LPEDSGVY 256 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v---~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~-~~~D~G~Y 256 (808)
..+|.|...|.+..+ .+|+.+.|.|.+ .|.|.+.|+|+|||.++..+..+.....+| +|.|.++ ..+|+|.|
T Consensus 3 ~~~P~f~~~P~~~~~~~~~eg~~v~L~C~~--~g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y 78 (384)
T 3kld_A 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEV--KGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTY 78 (384)
T ss_dssp CEEEEEEECCCCEEEETTCSCSEEEECCEE--EEESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEE
T ss_pred CCCCEEEeCCcceEeecCCCCCeEEEEeEe--cCCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEE
Confidence 347889988888776 689999999999 578999999999999997554333333344 5777765 78999999
Q ss_pred EEEEEeCceeEEE-EEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEE
Q psy2145 257 TCRAVNALGQAVT-SGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHF 335 (808)
Q Consensus 257 ~C~a~n~~g~~~~-~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l 335 (808)
+|.|.|..|...+ .+.|.|...+ +..........+.+|+.+.|
T Consensus 79 ~C~A~N~~G~~~s~~~~l~v~~~~------------------------------------~~~~~~~~~~~v~~G~~~~l 122 (384)
T 3kld_A 79 QCIATNSFGTIVSREAKLQFAYLE------------------------------------NFKTRTRSTVSVRRGQGMVL 122 (384)
T ss_dssp EEEEEETTEEEECCCEEEEEEEEC------------------------------------CCSCCCCCCEEEEETCCEEE
T ss_pred EEEEEcCcccEEecceEEEEeccc------------------------------------ccccCCCCceeEEcCCCeEE
Confidence 9999999997643 5666664321 11112234567889999999
Q ss_pred EEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE---EEEEEEeccc
Q psy2145 336 EARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS---STLFVESKAS 412 (808)
Q Consensus 336 ~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~---~~l~V~~~~~ 412 (808)
.|.+. .+.|.+.+.|++++.++....+.....+.+ .|.|.++..+|+|.|+|.|.|..|..... ..+.+.....
T Consensus 123 ~C~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~ 199 (384)
T 3kld_A 123 LCGPP-PHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV 199 (384)
T ss_dssp CCCCC-SEESCEEEEEEETTEECCCSSSEEECTTTC--CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE
T ss_pred ecCCC-CCCCCeEEEEEECCCCCEeeccEEEEcCCC--cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc
Confidence 99752 355778999999999887666655544444 69999999999999999999998865421 2222221000
Q ss_pred ccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCC
Q psy2145 413 LQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKR 492 (808)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (808)
.
T Consensus 200 ~------------------------------------------------------------------------------- 200 (384)
T 3kld_A 200 M------------------------------------------------------------------------------- 200 (384)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEEC-CEecCCCCCeEEEeeCcEEEEEECCCCC
Q psy2145 493 PEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRN-EKPLEDSSRITTKHDFGYVAMDLSHVRA 571 (808)
Q Consensus 493 ~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~ 571 (808)
...+|.+.........+.+|+.+.|.|.+ .|.|.|.+.|+|+ |..+.... ......+ .|.|.+++.
T Consensus 201 -------~~~~p~~~~~~~~~~~~~~G~~v~l~C~~--~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~--~L~I~~v~~ 267 (384)
T 3kld_A 201 -------GEYEPKIEVQFPETVPAEKGTTVKLECFA--LGNPVPTILWRRADGKPIARKA--RRHKSNG--ILEIPNFQQ 267 (384)
T ss_dssp -------CCEEEEEEEECCSEEEEETTSCEEEEEEE--EEESCCEEEEEETTCCCCCTTC--EECTTSC--EEEECSCCG
T ss_pred -------cccCCceeecCCCceEecCCCcEEEEEEE--eecCCCcEEEEeCCCccccccc--eecCCCc--EEEECCCCh
Confidence 00012222222222257899999999999 7999999999995 55554422 2222223 799999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|....++.|.|... |.|...+.. ..+.+|
T Consensus 268 ~D~G~Y~C~a~N~~G~~~~~~~l~v~~~------------------------------------P~~~~~~~~-~~v~~g 310 (384)
T 3kld_A 268 EDAGSYECVAENSRGKNVAKGQLTFYAQ------------------------------------PNWVQIIND-IHVAME 310 (384)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEEE------------------------------------EEEEECCCC-EEECTT
T ss_pred hhCEEEEEEEEcCCCeEEEEEEEEEecC------------------------------------CccccCCCc-eEecCC
Confidence 9999999999999999999999999874 445544433 568899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 652 QSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 652 ~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
+.+.|.|.+ .|.|.|.|.|+|||.+|..+.++.+. ++ +|.|.++..+|+|.|+|.|.|.+|.+.+++.|.|.+
T Consensus 311 ~~v~l~C~~--~g~P~p~i~W~k~g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 311 ESVFWECKA--NGRPKPTYRWLKNGDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp CCEEEECEE--EEESCCEEEEEETTEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCEEEEeEC--CccCCCeEEEEECCEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 999999999 79999999999999999988888763 33 899999999999999999999999999999999963
No 15
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=8e-46 Score=406.69 Aligned_cols=372 Identities=23% Similarity=0.385 Sum_probs=292.1
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCC--CceEEEecCceEEEEEccC-----CCCCc
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSG--SRFTETNNFGFVALDIMQC-----LPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~I~~~-----~~~D~ 253 (808)
.....|...|.++.+.+|++++|.|.+.+ +.|.+.|.|+|||..+... .++....++ +|.|.++ +.+|+
T Consensus 19 ~~~~~~~~~P~~~~v~~G~~v~L~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~~~D~ 94 (403)
T 3laf_A 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDRKQQLPNG---SLLIQNILHSRHHKPDE 94 (403)
T ss_dssp CCSSEEEECCCCEEECTTCCEEECCEEEC-TTCCCEEEEEETTEECCTTSCTTEEECTTS---CEEECSCCCBTTBCSSC
T ss_pred ceeEEEEeCCCceEEecCCcEEEEEEcCC-CCCCceEEEEECCEECccCCcccEEEecCC---cEEEeeeeccCCCCCcc
Confidence 56778889999999999999999999952 4678899999999998643 344443333 5777777 67899
Q ss_pred EEEEEEEEeCceeEE--EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCC
Q psy2145 254 GVYTCRAVNALGQAV--TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQ 331 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~--~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~ 331 (808)
|.|+|.|.|..+... ..+.|.|.. +|.+...+....+.+|+
T Consensus 95 G~Y~C~~~~~~~~~~~s~~~~l~v~~-------------------------------------p~~~~~~~~~~~~~~G~ 137 (403)
T 3laf_A 95 GLYQCEASLGDSGSIISRTAKVMVAG-------------------------------------PLRFLSQTESITAFMGD 137 (403)
T ss_dssp EEEEEEEECGGGCEEECCCEEEEECC-------------------------------------CCEECSCCCCEEEETTS
T ss_pred eEEEEEEEeCCCccEEEEEEEEEecC-------------------------------------CCccccCCCcEEEEcCC
Confidence 999999997544332 345555532 56777777788899999
Q ss_pred eEEEEEEEeecCCCccEEEEEECCEeccC---CCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy2145 332 AAHFEARLIPVGDSKLKVTWLRNGVPIQA---SNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV-TSSTLFV 407 (808)
Q Consensus 332 ~~~l~C~~~~~g~p~~~v~W~~~g~~l~~---~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 407 (808)
.+.|.|.+ .+.|.+.+.|+++|..+.. ..+.....+ + +|.|.++..+|+|.|+|.|.|..|... ..+.+.|
T Consensus 138 ~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v 212 (403)
T 3laf_A 138 TVLLKCEV--IGDPMPTIHWQKNQQDLNPIPGDSRVVVLPS-G--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRI 212 (403)
T ss_dssp CEEECCCE--ECSSCCEEEEEESSSBCCCCTTCCSEEECTT-S--CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEE
T ss_pred eEEEEEEE--cccCCCeEEEEECCEeccccCCceEEEEcCC-c--eEEEcccccccCEEEEEEEEcCCCceeccceeEEE
Confidence 99999998 7889999999999988843 334333323 3 699999999999999999999887643 3467777
Q ss_pred EecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccC
Q psy2145 408 ESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDT 487 (808)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (808)
...+.+.
T Consensus 213 ~~~p~~~------------------------------------------------------------------------- 219 (403)
T 3laf_A 213 LSDPGLH------------------------------------------------------------------------- 219 (403)
T ss_dssp ECCCCCC-------------------------------------------------------------------------
T ss_pred ecCCCcc-------------------------------------------------------------------------
Confidence 6543221
Q ss_pred CCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEEC
Q psy2145 488 EPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLS 567 (808)
Q Consensus 488 ~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~ 567 (808)
.++.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+...........++ .|.|.
T Consensus 220 --------------~~~~~~~~~~~~-~~~~g~~~~l~C~~--~~~p~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~i~ 280 (403)
T 3laf_A 220 --------------RQLYFLQRPSNV-IAIEGKDAVLECCV--SGYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLIS 280 (403)
T ss_dssp --------------EEEEEEECCCCE-EEETTSCEEECCEE--EEESCCEEEEEETTEECCCSSSSEEEETTT--EEEEC
T ss_pred --------------cCceEecCCCce-EecCCCcEEEEEEc--CCCCCCeEEEEECCeeccCCCceEEECCcc--EEEEe
Confidence 011223333333 57899999999999 789999999999999987654433333333 79999
Q ss_pred CCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 568 HVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 568 ~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
++..+|+|.|+|.|.|..|..+.++.|.|..+ |.|...+. ...
T Consensus 281 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~------------------------------------p~~~~~~~-~~~ 323 (403)
T 3laf_A 281 NVTDDDSGTYTCVVTYKNENISASAELTVLVP------------------------------------PWFLNHPS-NLY 323 (403)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE------------------------------------EEEEECCC-CEE
T ss_pred CCCHHHCEEEEEEEEcCCCceEEEEEEEEECC------------------------------------CcEeecCc-ceE
Confidence 99999999999999999999999999999874 33433333 356
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+... ..|.|.++..+|+|.|+|.|.|.+|..+.++.|.
T Consensus 324 ~~~g~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 398 (403)
T 3laf_A 324 AYESMDIEFECAV--SGKPVPTVNWMKNGDVVIPSDYFQIVGG---SNLRILGVVKSDEGFYQCVAENEAGNAQSSAQLI 398 (403)
T ss_dssp CCTTCCEEECCEE--EEESCCEEEEEETTEECCCSSSEEEETT---TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCCeEEEEEEE--eeccCCEEEEEECCEECCCCCcEEEecC---ccEEEeccccccCEEEEEEEEcCCceEEEEEEEE
Confidence 8899999999999 7999999999999999988888776532 3799999999999999999999999999999999
Q ss_pred EEeCC
Q psy2145 728 VKSKS 732 (808)
Q Consensus 728 V~~~p 732 (808)
|..+|
T Consensus 399 V~~P~ 403 (403)
T 3laf_A 399 VPKPA 403 (403)
T ss_dssp CCCC-
T ss_pred EeCCC
Confidence 98764
No 16
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=100.00 E-value=4.9e-46 Score=405.07 Aligned_cols=369 Identities=24% Similarity=0.400 Sum_probs=274.1
Q ss_pred cceeecCCCCcccc---CCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEccc-CcCCCeeEE
Q psy2145 49 IYYTVTKPKSIENL---RERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDT-IPEDSGTYT 124 (808)
Q Consensus 49 ~~~~~~~p~~~~~v---~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~-~~~D~G~Y~ 124 (808)
.|.++.+|.++ .+ .+|+.+.|.|.+. |.|.+.|+|+|||.+|..+.+++....++ .|.|.++ ..+|+|.|+
T Consensus 5 ~P~f~~~P~~~-~~~~~~eg~~v~L~C~~~--g~P~p~i~W~k~g~~l~~~~~~~~~~~~g--~l~i~~~~~~~D~G~Y~ 79 (384)
T 3kld_A 5 GPVFVQEPSHV-MFPLDSEEKKVKLSCEVK--GNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQ 79 (384)
T ss_dssp EEEEEECCCCE-EEETTCSCSEEEECCEEE--EESCCEEEEEETTEECCC----CEEEETT--EEEEESCCHHHHCEEEE
T ss_pred CCEEEeCCcce-EeecCCCCCeEEEEeEec--CCCCCEEEEEECCEECcCCCCccEEEECC--EEEEcCCCCcccCEEEE
Confidence 46677788877 44 6899999999998 57888999999999997654444333444 4677665 889999999
Q ss_pred EEEEecCcceE-EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEE
Q psy2145 125 CRAVNLVGFAE-VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHF 203 (808)
Q Consensus 125 C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L 203 (808)
|.|.|..|... ..+.|.|...+. ........+.+.+|+.+.|
T Consensus 80 C~A~N~~G~~~s~~~~l~v~~~~~-------------------------------------~~~~~~~~~~v~~G~~~~l 122 (384)
T 3kld_A 80 CIATNSFGTIVSREAKLQFAYLEN-------------------------------------FKTRTRSTVSVRRGQGMVL 122 (384)
T ss_dssp EEEEETTEEEECCCEEEEEEEECC-------------------------------------CSCCCCCCEEEEETCCEEE
T ss_pred EEEEcCcccEEecceEEEEecccc-------------------------------------cccCCCCceeEEcCCCeEE
Confidence 99999988653 245555532110 0011223467889999999
Q ss_pred EEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE---EEEEEEeeCCc
Q psy2145 204 ECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT---SGNLLVHSKKS 280 (808)
Q Consensus 204 ~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~---~~~l~V~~~~~ 280 (808)
.|.+. .+.|.+.+.|++++.++....+.......+ .|.|.++..+|+|.|+|.|.|..|.... ...+.+.....
T Consensus 123 ~C~~~-~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~ 199 (384)
T 3kld_A 123 LCGPP-PHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGV 199 (384)
T ss_dssp CCCCC-SEESCEEEEEEETTEECCCSSSEEECTTTC--CEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEE
T ss_pred ecCCC-CCCCCeEEEEEECCCCCEeeccEEEEcCCC--cEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCc
Confidence 99763 255678999999999986655544444444 7999999999999999999998775432 12333321000
Q ss_pred ccccccccchhhhhhhhhccccccccccccccCCCCee-ccCCCceEeecCCeEEEEEEEeecCCCccEEEEEE-CCEec
Q psy2145 281 IQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF-TQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLR-NGVPI 358 (808)
Q Consensus 281 i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~-~g~~l 358 (808)
....+|.+ ...+....+.+|+.+.|.|.+ .|.|.+.+.|++ +|.++
T Consensus 200 ------------------------------~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~--~g~P~p~i~W~k~~~~~~ 247 (384)
T 3kld_A 200 ------------------------------MGEYEPKIEVQFPETVPAEKGTTVKLECFA--LGNPVPTILWRRADGKPI 247 (384)
T ss_dssp ------------------------------CCCEEEEEEEECCSEEEEETTSCEEEEEEE--EEESCCEEEEEETTCCCC
T ss_pred ------------------------------ccccCCceeecCCCceEecCCCcEEEEEEE--eecCCCcEEEEeCCCccc
Confidence 00112333 233456678899999999999 789999999999 45555
Q ss_pred cCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccc
Q psy2145 359 QASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRK 438 (808)
Q Consensus 359 ~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (808)
....+ ....++ .|.|.++..+|+|.|+|.|.|..|.....+.|.|...|
T Consensus 248 ~~~~~--~~~~~~--~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P--------------------------- 296 (384)
T 3kld_A 248 ARKAR--RHKSNG--ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQP--------------------------- 296 (384)
T ss_dssp CTTCE--ECTTSC--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE---------------------------
T ss_pred cccce--ecCCCc--EEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCC---------------------------
Confidence 44322 222223 79999999999999999999999999888889887643
Q ss_pred cceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccC
Q psy2145 439 EEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEE 518 (808)
Q Consensus 439 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~ 518 (808)
.|...+.+. .+.+
T Consensus 297 ------------------------------------------------------------------~~~~~~~~~-~v~~ 309 (384)
T 3kld_A 297 ------------------------------------------------------------------NWVQIINDI-HVAM 309 (384)
T ss_dssp ------------------------------------------------------------------EEEECCCCE-EECT
T ss_pred ------------------------------------------------------------------ccccCCCce-EecC
Confidence 333333333 5788
Q ss_pred CCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 519 GKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 519 G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
|+.+.|.|.+ .|.|.|.|+|+|||.+|..+.++.+. ++ +|.|.++..+|+|.|+|.|.|..|...+++.|.|..
T Consensus 310 g~~v~l~C~~--~g~P~p~i~W~k~g~~l~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 310 EESVFWECKA--NGRPKPTYRWLKNGDPLLTRDRIQIE--QG--TLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVIA 383 (384)
T ss_dssp TCCEEEECEE--EEESCCEEEEEETTEECCCBTTEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CCCEEEEeEC--CccCCCeEEEEECCEECCCCccEEEe--CC--EEEEeecChhhCEEEEEEEEeCCceEEeceEEEEec
Confidence 9999999999 79999999999999999888887654 33 799999999999999999999999999999999863
No 17
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=404.94 Aligned_cols=359 Identities=15% Similarity=0.179 Sum_probs=242.6
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
+.++..+..+.+.+|+++.|.|.+ .+.|.+.|.|++++..+.....+.. ...+..+|.|.+++.+|+|.|+|.|.|.
T Consensus 49 ~~~~~~~~~v~V~~G~~v~L~C~v--~g~P~p~i~W~~~~~~l~~~~~~~~-~~~~~~sL~I~~v~~~D~G~Y~C~a~N~ 125 (423)
T 3qs7_E 49 SGTVYEAAAVEVDVSASITLQVLV--DAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSE 125 (423)
T ss_dssp -------CEEEECSSCCEEEEEEC--SCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC-
T ss_pred CcceeccccEEEecCCcEEEEEEE--EcCCCCeEEEEECCCccCccceecc-ccceEEEEEEeecCcccCEEEEEEEEcC
Confidence 345556668999999999999999 6789999999999988765433221 2223457999999999999999999999
Q ss_pred ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC
Q psy2145 264 LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG 343 (808)
Q Consensus 264 ~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g 343 (808)
.|.....+.|.|..++ .+. +.....+..|+.+.|.|.+ .|
T Consensus 126 ~g~~~~~~~l~V~~~p-------------------------------------~~~-~~~p~~~~~~~~~~L~C~a--~G 165 (423)
T 3qs7_E 126 ATNYTILFTVSIRNTL-------------------------------------LYT-LRRPYFRKMENQDALVCIS--ES 165 (423)
T ss_dssp -CEEEEEEEEEEC------------------------------------------C-EEEEEEEECSSSSCEEEEE--EE
T ss_pred CCcEEEEEEEEEecCc-------------------------------------ccc-ccCCcEeccCCceEEEEEE--ee
Confidence 9998888888886422 221 1112234568888999999 79
Q ss_pred CCccEEEEEECCEeccCCCc---EEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecccccccccc
Q psy2145 344 DSKLKVTWLRNGVPIQASNR---VSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESKASLQLDTQN 419 (808)
Q Consensus 344 ~p~~~v~W~~~g~~l~~~~~---~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~ 419 (808)
.|.|.|+|++++..+..... ..+..... .| ...|+|.|+|.|.|..|..... +.|.|...+..
T Consensus 166 ~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~--~l-----~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~------ 232 (423)
T 3qs7_E 166 VPEPIVEWVLCDSQGESCKEESPAVVKKEEK--VL-----HELFGTDIRCCARNELGRECTRLFTIDLNQTPQT------ 232 (423)
T ss_dssp SSCCEEEEEEC-------------CEEECCS--EE-----CCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS------
T ss_pred ecCCeEEEEECCCCCccccccccccccccce--EE-----ecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc------
Confidence 99999999999886532110 00111111 11 5789999999999999987553 55555432211
Q ss_pred hHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCC
Q psy2145 420 EAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNA 499 (808)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (808)
T Consensus 233 -------------------------------------------------------------------------------- 232 (423)
T 3qs7_E 233 -------------------------------------------------------------------------------- 232 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCC-CCCcEEEEEECCEecCCCCCeEEEe------eCcEEEEEECCCCCC
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG-DPTLKVEWFRNEKPLEDSSRITTKH------DFGYVAMDLSHVRAE 572 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~~~v~W~k~g~~l~~~~~~~~~~------~~~~~~L~I~~v~~~ 572 (808)
++.+ ..+.+|+.+.|.|.+ .| .|.+.|+|+|+|..+.....+.... .....+|.|.+++.+
T Consensus 233 ---------~~~~-~~v~~G~~v~L~C~~--~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 300 (423)
T 3qs7_E 233 ---------TLPQ-LFLKVGEPLWIRCKA--VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARN 300 (423)
T ss_dssp ---------STTE-EEEETTSCEEEEEEE--EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTT
T ss_pred ---------CCCc-eEEeCCCeEEEEEEE--EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHH
Confidence 0111 157899999999999 56 7789999999999886653331111 111236999999999
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec-CCCccccCC
Q psy2145 573 DEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL-TGTSEIMEG 651 (808)
Q Consensus 573 D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~-~~~~~v~~G 651 (808)
|+|.|+|.|.|. ...++.|.|...|.+ .... .....+.+|
T Consensus 301 D~G~Y~C~A~N~---~~~~~~L~V~~~p~i------------------------------------~~~~~~~~~~v~~G 341 (423)
T 3qs7_E 301 DTGYYTCSSSKH---PSQSALVTIVEKGFI------------------------------------NATNSSEDYEIDQY 341 (423)
T ss_dssp TCEEEEEEETTE---EEEEEEEEEESSCEE------------------------------------EEC---CEECCCTT
T ss_pred HCEEEEEEEecC---CCceEEEEEEeCCcc------------------------------------eEcCCCccEEecCC
Confidence 999999999998 677788888865432 2111 123468899
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 652 QSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 652 ~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
+.+.|.|.+ .|+|.|.|.|+|||..|..+.+.. .++ ..+.+..+..+|+|.|+|.|+|.+|.++.++.|.|.++
T Consensus 342 ~~v~l~C~~--~g~P~p~i~W~k~g~~l~~~~~~~---~~~-~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~ 415 (423)
T 3qs7_E 342 EEFCFSVRF--KAYPQIRCTWTFSRKSFPCEQKGL---DNG-YSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415 (423)
T ss_dssp CCCCEEEEE--EEESCCEEEEEETTEEEECBCCBC---SSS-SEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC----
T ss_pred CeEEEEEEE--EEcCCCeEEEEECCEECCCccccc---cCC-cEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecC
Confidence 999999999 799999999999999997653100 001 12223556779999999999999999999999999988
Q ss_pred CCcc
Q psy2145 732 SDIV 735 (808)
Q Consensus 732 p~~~ 735 (808)
|.-.
T Consensus 416 p~~~ 419 (423)
T 3qs7_E 416 TKHH 419 (423)
T ss_dssp ----
T ss_pred Cccc
Confidence 7643
No 18
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.3e-45 Score=402.03 Aligned_cols=366 Identities=24% Similarity=0.391 Sum_probs=281.8
Q ss_pred CCCeEEeecCceee---cCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCC--CceEEEecCceEEEEEccCCC-CCcEE
Q psy2145 182 QAPIFTTSLKNCEI---KEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSG--SRFTETNNFGFVALDIMQCLP-EDSGV 255 (808)
Q Consensus 182 ~~P~~~~~~~~~~v---~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~I~~~~~-~D~G~ 255 (808)
.+|.|...|.+..+ .+|++++|.|.+ .+.|.+.|.|+|||..+..+ .++... ++ +|.|.++.. +|+|.
T Consensus 3 ~~P~~~~~p~~~~~~~~~~g~~v~l~C~~--~g~p~~~v~W~k~g~~~~~~~~~~~~~~--~~--~L~i~~~~~~~D~G~ 76 (382)
T 1cs6_A 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRA--RANPPATYRWKMNGTELKMGPDSRYRLV--AG--DLVISNPVKAKDAGS 76 (382)
T ss_dssp EEEEEEECCCCEEEETTCSCCEEEECCEE--EEESCCEEEEEETTEECCCSTTSSEEEE--TT--EEEEESCCHHHHCEE
T ss_pred CCCEEEECCCcEEEecCCCCCcEEEEEEe--cCCCCCEEEEEECCEECCcCCCccEEee--CC--eEEEecccccccCEE
Confidence 47899999988876 789999999999 46788899999999998754 344433 33 799999997 99999
Q ss_pred EEEEEEeCceeEEE-EEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEE
Q psy2145 256 YTCRAVNALGQAVT-SGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAH 334 (808)
Q Consensus 256 Y~C~a~n~~g~~~~-~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~ 334 (808)
|+|.|.|..|...+ .+.|.|...+ +..........+.+|+.+.
T Consensus 77 Y~C~a~n~~g~~~s~~~~l~v~~~~------------------------------------~~~~~~~~~~~v~~G~~v~ 120 (382)
T 1cs6_A 77 YQCVATNARGTVVSREASLRFGFLQ------------------------------------EFSAEERDPVKITEGWGVM 120 (382)
T ss_dssp EEEEEEETTEEEECCCEEEEEEEEC------------------------------------CCCSSCCCCEEEETTSCEE
T ss_pred EEEEEEcCCcEEEecceEEEeeccc------------------------------------cccccCCCceEEecCCcEE
Confidence 99999999987643 5677775422 1111234457789999999
Q ss_pred EEEEEeecCCCccEEEEEECCEecc--CCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-----EEEEE
Q psy2145 335 FEARLIPVGDSKLKVTWLRNGVPIQ--ASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-----STLFV 407 (808)
Q Consensus 335 l~C~~~~~g~p~~~v~W~~~g~~l~--~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-----~~l~V 407 (808)
|.|.+. .+.|.+.+.|+++|.++. .+.+.....+.+ .|.|.++..+|+|.|+|.|.|..|..... +.|.|
T Consensus 121 l~C~~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v 197 (382)
T 1cs6_A 121 FTCSPP-PHYPALSYRWLLNEFPNFIPADGRRFVSQTTG--NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSL 197 (382)
T ss_dssp ECCCCC-SEESCCEEEEEESSTTCBCCCCSSEEECTTTC--CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEE
T ss_pred EEeCCC-CCCCCcEEEEEECCCccccccCceEEEecCce--EEEEEeeCcccCeeEEEEEEEccccccceeEccceeecc
Confidence 999852 466889999999997753 334444433333 69999999999999999999987644322 23333
Q ss_pred EecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccC
Q psy2145 408 ESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDT 487 (808)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (808)
....
T Consensus 198 ~~~~---------------------------------------------------------------------------- 201 (382)
T 1cs6_A 198 AAED---------------------------------------------------------------------------- 201 (382)
T ss_dssp ESCC----------------------------------------------------------------------------
T ss_pred chhh----------------------------------------------------------------------------
Confidence 2110
Q ss_pred CCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEEC
Q psy2145 488 EPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLS 567 (808)
Q Consensus 488 ~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~ 567 (808)
....+|.+.........+.+|+.+.|.|.+ .|.|.+.+.|+|++..+.... . .....|.|.
T Consensus 202 -----------~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~~~i~W~~~~~~~~~~~----~--~~~~~L~i~ 262 (382)
T 1cs6_A 202 -----------ARQYAPSIKAKFPADTYALTGQMVTLECFA--FGNPVPQIKWRKLDGSQTSKW----L--SSEPLLHIQ 262 (382)
T ss_dssp -----------CCCEEEEEEECCCSEEEEETTCCEEEECEE--EEESCCEEEEEECCSCCSCCC----S--BSSSEEEEC
T ss_pred -----------cccCCCceeccCCCceEEeCCCeEEEEEEE--ccCCCCEEEEEECCcccccEE----e--cCCcEEEEc
Confidence 000123333332222368899999999999 789999999999988765411 1 122279999
Q ss_pred CCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 568 HVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 568 ~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
++..+|+|.|+|.|.|..|....++.|.|... |.|...+. ...
T Consensus 263 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~------------------------------------p~~~~~~~-~~~ 305 (382)
T 1cs6_A 263 NVDFEDEGTYECEAENIKGRDTYQGRIIIHAQ------------------------------------PDWLDVIT-DTE 305 (382)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE------------------------------------EEEEECCC-CEE
T ss_pred cCChhhCEEEEEEEEcCCCeEEEEEEEEEecC------------------------------------CCcccCCC-ccE
Confidence 99999999999999999999999999999865 44444333 256
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
+.+|+.++|.|.+ .|.|.|.|.|+|||..+..+.++.+. ++ +|.|.++..+|+|.|+|.|.|.+|....++.|.
T Consensus 306 ~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 379 (382)
T 1cs6_A 306 ADIGSDLRWSCVA--SGKPRPAVRWLRDGQPLASQNRIEVS--GG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAELT 379 (382)
T ss_dssp EETTCCEEEECEE--EEESCCEEEEEETTEECCCCSSEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EcCCCeEEEEEEe--eeecCCEEEEEECCEECCCCceEEEE--CC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEEEE
Confidence 8899999999999 79999999999999999988887764 33 799999999999999999999999999999999
Q ss_pred EEe
Q psy2145 728 VKS 730 (808)
Q Consensus 728 V~~ 730 (808)
|.+
T Consensus 380 V~a 382 (382)
T 1cs6_A 380 VQA 382 (382)
T ss_dssp EEC
T ss_pred EeC
Confidence 963
No 19
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=100.00 E-value=3e-45 Score=402.09 Aligned_cols=369 Identities=23% Similarity=0.349 Sum_probs=290.9
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeecc--CcEEEEeeCCeEEEEEccc-----CcCCCe
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIG--HRFRPIHDFGYVALDIIDT-----IPEDSG 121 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~--~r~~~~~~~~~~~L~I~~~-----~~~D~G 121 (808)
...++..|.++ .+.+|+.++|.|.+.+ +.|.+.|.|+|+|..+..+ .++....++ .|.|.++ +.+|+|
T Consensus 21 ~~~~~~~P~~~-~v~~G~~v~L~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~---~l~i~~~~~~~~~~~D~G 95 (403)
T 3laf_A 21 SLHFVSEPSDA-VTMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDRKQQLPNG---SLLIQNILHSRHHKPDEG 95 (403)
T ss_dssp SSEEEECCCCE-EECTTCCEEECCEEEC-TTCCCEEEEEETTEECCTTSCTTEEECTTS---CEEECSCCCBTTBCSSCE
T ss_pred eEEEEeCCCce-EEecCCcEEEEEEcCC-CCCCceEEEEECCEECccCCcccEEEecCC---cEEEeeeeccCCCCCcce
Confidence 45667889998 8999999999999985 4678899999999998753 455444333 4777777 778999
Q ss_pred eEEEEEEecCcceEE--EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCC
Q psy2145 122 TYTCRAVNLVGFAEV--QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQ 199 (808)
Q Consensus 122 ~Y~C~a~n~~g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~ 199 (808)
.|+|.|.|..+.... .+.|.| ..+|.|...+....+.+|+
T Consensus 96 ~Y~C~~~~~~~~~~~s~~~~l~v--------------------------------------~~p~~~~~~~~~~~~~~G~ 137 (403)
T 3laf_A 96 LYQCEASLGDSGSIISRTAKVMV--------------------------------------AGPLRFLSQTESITAFMGD 137 (403)
T ss_dssp EEEEEEECGGGCEEECCCEEEEE--------------------------------------CCCCEECSCCCCEEEETTS
T ss_pred EEEEEEEeCCCccEEEEEEEEEe--------------------------------------cCCCccccCCCcEEEEcCC
Confidence 999999975444332 344444 3467777778888999999
Q ss_pred eEEEEEEEeecCCCCeEEEEeeCCEEccC---CCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEE-EEEEEEE
Q psy2145 200 RAHFECRLIPVSDNTMKVEWFHNNVPIKS---GSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAV-TSGNLLV 275 (808)
Q Consensus 200 ~v~L~C~~~~~~~p~~~v~W~~~g~~l~~---~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V 275 (808)
++.|.|.+ .+.|.+.+.|+|+|..+.. ..+..... .+ +|.|.+++.+|+|.|+|.|.|..|... ..+.|.|
T Consensus 138 ~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v 212 (403)
T 3laf_A 138 TVLLKCEV--IGDPMPTIHWQKNQQDLNPIPGDSRVVVLP-SG--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRI 212 (403)
T ss_dssp CEEECCCE--ECSSCCEEEEEESSSBCCCCTTCCSEEECT-TS--CEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEE
T ss_pred eEEEEEEE--cccCCCeEEEEECCEeccccCCceEEEEcC-Cc--eEEEcccccccCEEEEEEEEcCCCceeccceeEEE
Confidence 99999999 5788889999999998842 33333332 23 799999999999999999999877643 4577777
Q ss_pred eeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECC
Q psy2145 276 HSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNG 355 (808)
Q Consensus 276 ~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g 355 (808)
...+.+ ..++.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+++|
T Consensus 213 ~~~p~~-------------------------------~~~~~~~~~~~~~~~~~g~~~~l~C~~--~~~p~~~~~W~~~~ 259 (403)
T 3laf_A 213 LSDPGL-------------------------------HRQLYFLQRPSNVIAIEGKDAVLECCV--SGYPPPSFTWLRGE 259 (403)
T ss_dssp ECCCCC-------------------------------CEEEEEEECCCCEEEETTSCEEECCEE--EEESCCEEEEEETT
T ss_pred ecCCCc-------------------------------ccCceEecCCCceEecCCCcEEEEEEc--CCCCCCeEEEEECC
Confidence 654321 112345556667788999999999999 68889999999999
Q ss_pred EeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhcccccccc
Q psy2145 356 VPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRF 435 (808)
Q Consensus 356 ~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (808)
..+...........++ .|.|.++..+|+|.|+|.|.|..|....++.|.|..+|
T Consensus 260 ~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p------------------------ 313 (403)
T 3laf_A 260 EVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPP------------------------ 313 (403)
T ss_dssp EECCCSSSSEEEETTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEE------------------------
T ss_pred eeccCCCceEEECCcc--EEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCC------------------------
Confidence 9987654333333333 69999999999999999999999998888999887643
Q ss_pred ccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCccc
Q psy2145 436 KRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDA 515 (808)
Q Consensus 436 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~ 515 (808)
.|...+.+. .
T Consensus 314 ---------------------------------------------------------------------~~~~~~~~~-~ 323 (403)
T 3laf_A 314 ---------------------------------------------------------------------WFLNHPSNL-Y 323 (403)
T ss_dssp ---------------------------------------------------------------------EEEECCCCE-E
T ss_pred ---------------------------------------------------------------------cEeecCcce-E
Confidence 222233333 4
Q ss_pred ccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEE
Q psy2145 516 VEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMK 595 (808)
Q Consensus 516 v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~ 595 (808)
+.+|+.+.|.|.+ .|.|.+.|.|+|||..+..+.++.+... + .|.|.++..+|+|.|+|.|.|..|....++.|.
T Consensus 324 ~~~g~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~-~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~ 398 (403)
T 3laf_A 324 AYESMDIEFECAV--SGKPVPTVNWMKNGDVVIPSDYFQIVGG-S--NLRILGVVKSDEGFYQCVAENEAGNAQSSAQLI 398 (403)
T ss_dssp CCTTCCEEECCEE--EEESCCEEEEEETTEECCCSSSEEEETT-T--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCCeEEEEEEE--eeccCCEEEEEECCEECCCCCcEEEecC-c--cEEEeccccccCEEEEEEEEcCCceEEEEEEEE
Confidence 7889999999999 7899999999999999988877766543 3 799999999999999999999999999999999
Q ss_pred EEec
Q psy2145 596 IKTK 599 (808)
Q Consensus 596 V~~~ 599 (808)
|..+
T Consensus 399 V~~P 402 (403)
T 3laf_A 399 VPKP 402 (403)
T ss_dssp CCCC
T ss_pred EeCC
Confidence 8764
No 20
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=100.00 E-value=2.2e-44 Score=415.52 Aligned_cols=404 Identities=14% Similarity=0.114 Sum_probs=299.1
Q ss_pred ccccccccccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee-
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT- 94 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~- 94 (808)
+..++.+|+|.|.|.+.|..........+.....+.+...|..+ .+.+|+.++|.|.+.+ +.|.+.+.|||++..+.
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~-~v~~G~~v~l~C~~~~-~~~~~~v~W~k~~~~~~~ 156 (585)
T 2ocw_A 79 IAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVY-TVDLGRTVTINCPFKT-ENAQKRKSLYKQIGLYPV 156 (585)
T ss_pred ECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccE-EEEcCCCEEEEEEecC-CCCCccEEEEECCCCCce
Confidence 55678889999999998876554333333333344455666777 8999999999999985 35567899999885421
Q ss_pred ---c---------cCcEEEEeeC---CeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccce
Q psy2145 95 ---I---------GHRFRPIHDF---GYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLE 159 (808)
Q Consensus 95 ---~---------~~r~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~ 159 (808)
. ..|+.+..++ +.++|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 157 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~-------------- 222 (585)
T 2ocw_A 157 LVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKP-------------- 222 (585)
T ss_pred EEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccC--------------
Confidence 1 3456655443 3458999999999999999999999999888888888531
Q ss_pred eeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC-eEEEEe-eCCEE---c-c------
Q psy2145 160 QIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWF-HNNVP---I-K------ 227 (808)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~-~~g~~---l-~------ 227 (808)
+ +..+.+.+|+.++|.|.+. ...|. +.+.|+ +||.. + .
T Consensus 223 -----------------------~------p~~~~~~~G~~v~l~C~~~-~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~ 272 (585)
T 2ocw_A 223 -----------------------E------PELVYEDLRGSVTFHCALG-PEVANVAKFLCRQSSGENCDVVVNTLGKRA 272 (585)
T ss_pred -----------------------C------CceeEEcCCCcEEEEEEcC-CCCCCceEEEEEeCCCCCcceEEeCCCcCC
Confidence 2 2334578999999999972 23333 789997 88842 2 1
Q ss_pred --CCCceEEEe--cCceEEEEEccCCCCCcEEEEEEEEeCceeEE-----EEEEEEEeeCCcccccccccchhhhhhhhh
Q psy2145 228 --SGSRFTETN--NFGFVALDIMQCLPEDSGVYTCRAVNALGQAV-----TSGNLLVHSKKSIQTETQHGESLSRLQQLE 298 (808)
Q Consensus 228 --~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-----~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e 298 (808)
...++.+.. ..|.++|.|.+++.+|+|.|+|.|.|. |... ..+.|.|..
T Consensus 273 ~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~-g~~~~~~~~~~~~l~V~~--------------------- 330 (585)
T 2ocw_A 273 PAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSD-GQLQEGSPIQAWQLFVNE--------------------- 330 (585)
T ss_pred cccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcC-CCccccCceeeEEEEEec---------------------
Confidence 133444433 245568999999999999999999995 5443 667787764
Q ss_pred ccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEE----EEEE--CCE--eccC---------C
Q psy2145 299 QGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKV----TWLR--NGV--PIQA---------S 361 (808)
Q Consensus 299 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v----~W~~--~g~--~l~~---------~ 361 (808)
+|.+...+....+.+|+.+.|.|.+ .+.|.+.+ .|++ ||. .+.. .
T Consensus 331 ----------------~p~~~~~~~~~~~~~G~~v~l~C~~--~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~ 392 (585)
T 2ocw_A 331 ----------------ESTIPRSPTVVKGVAGSSVAVLCPY--NRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYE 392 (585)
T ss_pred ----------------ccccccCCcceEEEeCCcEEEEEec--CCCCCccEEEEEEEEccCCCCCceeeeecceeecccC
Confidence 4556566677888999999999999 78888877 8999 887 5432 3
Q ss_pred CcEEEEe--eCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhcccccccccccc
Q psy2145 362 NRVSTMH--DFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKE 439 (808)
Q Consensus 362 ~~~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (808)
.++.+.. ..+..+|.|.++..+|+|.|+|.| |..|.....+.|.|...+.
T Consensus 393 ~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p--------------------------- 444 (585)
T 2ocw_A 393 GRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEP--------------------------- 444 (585)
T ss_pred CCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCcc---------------------------
Confidence 4555543 345567999999999999999999 9999888888888875321
Q ss_pred ceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCC
Q psy2145 440 EEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEG 519 (808)
Q Consensus 440 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G 519 (808)
.+.. +.+. .+.+|
T Consensus 445 -----------------------------------------------------------------~~~~-~~~~-~v~~G 457 (585)
T 2ocw_A 445 -----------------------------------------------------------------NLKV-PGNV-TAVLG 457 (585)
T ss_pred -----------------------------------------------------------------cccc-CCce-eEecC
Confidence 1111 1122 57899
Q ss_pred CceEEEEEEe--eCCCCCcEEEEEECCEecCCCCC------eE-EEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEE
Q psy2145 520 KNAHFSCRLI--PVGDPTLKVEWFRNEKPLEDSSR------IT-TKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVT 590 (808)
Q Consensus 520 ~~v~l~C~v~--~~g~P~~~v~W~k~g~~l~~~~~------~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~ 590 (808)
+.+.|.|.+. +.+.|.+.|.|+|||..+..... +. ....+....|.|.++..+|+|.|+|.|.|..|...+
T Consensus 458 ~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 537 (585)
T 2ocw_A 458 ETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGET 537 (585)
T ss_pred CcEEEEEEecCCCCCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEE
Confidence 9999999982 12788999999999988754321 22 222344568999999999999999999999997665
Q ss_pred E-EEEEEEecc
Q psy2145 591 T-ASMKIKTKA 600 (808)
Q Consensus 591 s-~~l~V~~~~ 600 (808)
. +.|.|..+|
T Consensus 538 ~~~~l~V~~~p 548 (585)
T 2ocw_A 538 AAVYVAVEERK 548 (585)
T ss_pred EEEEEEEEeee
Confidence 5 899998866
No 21
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=6e-45 Score=397.55 Aligned_cols=357 Identities=19% Similarity=0.327 Sum_probs=272.1
Q ss_pred CCeEEeecCc-eeecCCCeEEEEEEEeecCCCCeEEEEee-CCEEccCCCceEEEecCceEEEEEccCCCCC------cE
Q psy2145 183 APIFTTSLKN-CEIKEGQRAHFECRLIPVSDNTMKVEWFH-NNVPIKSGSRFTETNNFGFVALDIMQCLPED------SG 254 (808)
Q Consensus 183 ~P~~~~~~~~-~~v~~G~~v~L~C~~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D------~G 254 (808)
+|.|+..|.+ +.+.+|+.++|.|.+ .+.|.+.|.|+| ||..+....++.....++ +|.|.+++.+| +|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~--~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKA--SGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEE--EEESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEEC--CCCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCc
Confidence 6889888876 568899999999999 578889999999 888887654444444445 79999999997 99
Q ss_pred EEEEEEEeCceeEE-EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeE
Q psy2145 255 VYTCRAVNALGQAV-TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAA 333 (808)
Q Consensus 255 ~Y~C~a~n~~g~~~-~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~ 333 (808)
.|+|.|.|..|... ..+.|.|.. +|.+...+....+.+|+.+
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~-------------------------------------~p~~~~~~~~~~v~~G~~v 121 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVV-------------------------------------AQYYEADVNKEHVIRGNSA 121 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEC-------------------------------------CCCCCCBCCCEEEETTSCE
T ss_pred eEEEEEEccCCeEEecceEEEEcc-------------------------------------ccccccCccceeeecCCcE
Confidence 99999999999753 456666543 4455555667788999999
Q ss_pred EEEEEEeecCCC---ccEEEEEECCEeccC-----CCcEEEEeeCcEEEEEEccCCCCCC-eEEEEEEEcCCcceE-EE-
Q psy2145 334 HFEARLIPVGDS---KLKVTWLRNGVPIQA-----SNRVSTMHDFGYVALNFKYTYPEDS-GTYTCRAVNELGEAV-TS- 402 (808)
Q Consensus 334 ~l~C~~~~~g~p---~~~v~W~~~g~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~d~-G~Y~C~a~n~~g~~~-~~- 402 (808)
.|.|.+ .+.+ .+.+.|+++|..+.. ..++.+..++ .|.|.++..+|+ |.|+|.|.|..+... .+
T Consensus 122 ~l~C~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~ 196 (388)
T 2v5m_A 122 VIKCLI--PSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSG---ELHIREVGPEDGYKSYQCRTKHRLTGETRLSA 196 (388)
T ss_dssp EECCBC--CTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTS---CEEESSCCGGGGGCCEEEEEEETTTCCEEECS
T ss_pred EEEEEC--cCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCC---cEEEecCCccccCeeEEEEeccCCCCceeecc
Confidence 999998 5543 389999999977643 3455444333 699999999999 999999999865432 22
Q ss_pred --EEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhh
Q psy2145 403 --STLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEK 480 (808)
Q Consensus 403 --~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (808)
..|.|..+....
T Consensus 197 ~~~~l~v~~~~~~~------------------------------------------------------------------ 210 (388)
T 2v5m_A 197 TKGRLVITEPISSS------------------------------------------------------------------ 210 (388)
T ss_dssp SCBCEEEECCCSCE------------------------------------------------------------------
T ss_pred ccceEEEecCCcCC------------------------------------------------------------------
Confidence 234444321000
Q ss_pred hcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEec------CCCCCeE
Q psy2145 481 IRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPL------EDSSRIT 554 (808)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l------~~~~~~~ 554 (808)
+|.+.........+.+|+.+.|.|.+ .|.|.+.|.|+|++..+ ....++.
T Consensus 211 ----------------------~p~~~~~~~~~~~v~~G~~v~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~ 266 (388)
T 2v5m_A 211 ----------------------APRTPALVQKPLELMVAHTISLLCPA--QGFPAPSFRWYKFIEGTTRKQAVVLNDRVK 266 (388)
T ss_dssp ----------------------EEECCSSCCCCEEEETTSCEEECCCC--EEESCCEEEEEEECTTSSCEEECCCSSSEE
T ss_pred ----------------------CCcCccccCCceEEeeCCcEEEEEEC--CCCCCCEEEEEecCCCCcccccccccCcee
Confidence 01111111111246789999999998 78999999999985432 2334443
Q ss_pred EEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccC
Q psy2145 555 TKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYE 634 (808)
Q Consensus 555 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~ 634 (808)
. ..+ .|.|.+++.+|+|.|+|.|.|..|..+.++.|.|..++.
T Consensus 267 ~--~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--------------------------------- 309 (388)
T 2v5m_A 267 Q--VSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLS--------------------------------- 309 (388)
T ss_dssp E--ETT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE---------------------------------
T ss_pred c--ccC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCc---------------------------------
Confidence 2 233 799999999999999999999999999999999987533
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..|..+. .+|.|.++..+|+|.|+|.|.
T Consensus 310 ---~~~~~~-~~~v~~g~~~~l~C~~--~g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~ 373 (388)
T 2v5m_A 310 ---AKIDPP-TQTVDFGRPAVFTCQY--TGNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVR 373 (388)
T ss_dssp ---EEEESS-EEEECTTSCEEEEEEE--EEECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEE
T ss_pred ---cccCCC-cEEecCCCCEEEEEEe--ccccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEEE
Confidence 222222 3468899999999999 799999999999999997643 279999999999999999999
Q ss_pred eCCcceEEEEEEEE
Q psy2145 715 NRAGEAVSSTSLKV 728 (808)
Q Consensus 715 N~~G~~~~s~~l~V 728 (808)
|.+|.++.++.|.|
T Consensus 374 N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 374 NDRESAEASAELKL 387 (388)
T ss_dssp CSSCEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEe
Confidence 99999999999987
No 22
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.5e-44 Score=396.72 Aligned_cols=374 Identities=23% Similarity=0.366 Sum_probs=282.5
Q ss_pred CCCCeEEee-cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCC--CceEEEecCceEEEEEc----cCCCCCc
Q psy2145 181 TQAPIFTTS-LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSG--SRFTETNNFGFVALDIM----QCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~-~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~I~----~~~~~D~ 253 (808)
..+|.|... +.+..+.+|++++|.|.+ .+.|.+.|.|+|||..+... .++......+ +|.|. +++.+|+
T Consensus 14 ~~~P~i~~~~~~~~~v~~G~~v~l~C~~--~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~D~ 89 (404)
T 3p3y_A 14 TQPPTITKQSAKDHIVDPRDNILIECEA--KGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG--TLVIDFRSGGRPEEYE 89 (404)
T ss_dssp CCCCCEEEECCTTCEECSSSCCCCCEEE--CCSSCCEEEEEETTEECCGGGCSSCBCCSSSC--CCBCCCTTTCCTTSSC
T ss_pred cCCCcccccCCccEEEcCCCCEEEEEEe--cCCCCCeEEEEECCEEeeeecCCcceEecCCc--eEEEEeccCCCCccCC
Confidence 568888764 677889999999999999 67899999999999987543 3333333334 45554 8889999
Q ss_pred EEEEEEEEeCceeEE-EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCe
Q psy2145 254 GVYTCRAVNALGQAV-TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~-~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|..|... ..+.|.|...+ ......+....+.+|+.
T Consensus 90 G~Y~C~a~n~~g~~~s~~~~l~V~~~p------------------------------------~~~~~~~~~~~v~~G~~ 133 (404)
T 3p3y_A 90 GEYQCFARNKFGTALSNRIRLQVSKSP------------------------------------LWPKENLDPVVVQEGAP 133 (404)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCC------------------------------------CCCCCCCCCEEEETTSC
T ss_pred EEEEEEEEcCCCeEeeeeEEEEEeccC------------------------------------ccccCCCCCeEEccCCc
Confidence 999999999988874 56777776422 11223334578899999
Q ss_pred EEEEEEEeecCCCccEEEEEECCE-eccCCCcEEEEeeCcEEEEEEccCCCCC-CeEEEEEEEcCCcceEEE---EEEEE
Q psy2145 333 AHFEARLIPVGDSKLKVTWLRNGV-PIQASNRVSTMHDFGYVALNFKYTYPED-SGTYTCRAVNELGEAVTS---STLFV 407 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~~g~-~l~~~~~~~~~~~~~~~~L~I~~v~~~d-~G~Y~C~a~n~~g~~~~~---~~l~V 407 (808)
+.|.|.+. .+.|.+.+.|++++. .+....++....+ + .|.|.++..+| +|.|+|.|.|..|..... ..+.|
T Consensus 134 v~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~--~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v 209 (404)
T 3p3y_A 134 LTLQCNPP-PGLPSPVIFWMSSSMEPITQDKRVSQGHN-G--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKV 209 (404)
T ss_dssp EEECCCCC-CCSSCCEEEEECTTSCBCCCCSSEEECTT-S--CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEE
T ss_pred EEEEeCCC-CCCCCCeEEEeCCCccccCCCCcEEEcCC-C--cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEE
Confidence 99999873 578899999999874 4444555554433 3 59999999999 599999999998865332 34444
Q ss_pred EecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccC
Q psy2145 408 ESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDT 487 (808)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 487 (808)
...+..
T Consensus 210 ~~~~~~-------------------------------------------------------------------------- 215 (404)
T 3p3y_A 210 LTTRGV-------------------------------------------------------------------------- 215 (404)
T ss_dssp ECCSCC--------------------------------------------------------------------------
T ss_pred eccCCc--------------------------------------------------------------------------
Confidence 322111
Q ss_pred CCCCCCCcCCCCccCCCeeeecCCC--cccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEE
Q psy2145 488 EPHKRPEVDDNATKQRPVFTKPLQN--IDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMD 565 (808)
Q Consensus 488 ~~~~~~~~~~~~~~~~P~f~~~~~~--~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~ 565 (808)
...+|.|..+... ...+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..... ......+ .|.
T Consensus 216 ------------~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~-~~~~~~~--~L~ 278 (404)
T 3p3y_A 216 ------------AERTPSFMYPQGTASSQMVLRGMDLLLECIA--SGVPTPDIAWYKKGGDLPSDKA-KFENFNK--ALR 278 (404)
T ss_dssp ------------CCCCCCBSSSCSSEEEEEEETTSCEEEECCB--CCSSCCEEEEEETTBCCCTTTE-EEEGGGT--EEE
T ss_pred ------------cccCCccccccCCCCCceEecCCCEEEEEEE--CCCCCCcEEEEECCEECCCCcc-cccccCc--eEE
Confidence 1113333333221 1247899999999998 8999999999999999876543 2332233 799
Q ss_pred ECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCC
Q psy2145 566 LSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGT 645 (808)
Q Consensus 566 I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~ 645 (808)
|.++..+|+|.|+|.|.|..|....++.|.|... |.|...+. .
T Consensus 279 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~------------------------------------p~~~~~~~-~ 321 (404)
T 3p3y_A 279 ITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAA------------------------------------PYWLDEPK-N 321 (404)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEE------------------------------------EEEEECCC-C
T ss_pred EccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCC------------------------------------CeeeccCC-c
Confidence 9999999999999999999999999999999875 33433333 3
Q ss_pred ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCc-EEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSR-FHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
..+.+|+.++|.|.+ .|.|.|.|.|++||..+..+.. ......++ +|.|.++..+|+|.|+|.|.|.+|....++
T Consensus 322 ~~v~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~ 397 (404)
T 3p3y_A 322 LILAPGEDGRLVCRA--NGNPKPTVQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANA 397 (404)
T ss_dssp EEECTTCCEEEECEE--EEESCCEEEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEE
T ss_pred ceeecCCcEEEEEEc--cccCCCceEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEE
Confidence 568899999999999 7999999999999999986542 22223344 899999999999999999999999999999
Q ss_pred EEEEEe
Q psy2145 725 SLKVKS 730 (808)
Q Consensus 725 ~l~V~~ 730 (808)
.|.|.+
T Consensus 398 ~l~V~d 403 (404)
T 3p3y_A 398 FVSVLD 403 (404)
T ss_dssp EEEEC-
T ss_pred EEEEEe
Confidence 999853
No 23
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=100.00 E-value=7.4e-46 Score=421.60 Aligned_cols=400 Identities=15% Similarity=0.154 Sum_probs=284.6
Q ss_pred ccccccccccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe-CCEEee
Q psy2145 16 YLSSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK-NGRPVT 94 (808)
Q Consensus 16 ~~~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~-~g~~l~ 94 (808)
+..++.+|.|.|.|.+.| +. .....+.....+.....|..+ .+.+|+.++|.|.+. +.|.+.|.||+ +|..+.
T Consensus 84 I~~~~~~D~G~Y~C~a~n--g~-~~~~~l~V~~p~~~~~~~~~~-~v~~G~~v~l~C~~~--~~~~~~v~W~~~~g~~l~ 157 (524)
T 2ec8_A 84 TEKAEATNTGKYTCTNKH--GL-SNSIYVFVRDPAKLFLVDRSL-YGKEDNDTLVRCPLT--DPEVTNYSLKGCQGKPLP 157 (524)
T ss_dssp ESSCCSTTCEEEEEEETT--SC-EEEEEEECCCSSCSBCCCCCC-CEETTSCEEECCCBS--CCCCSCEEEECSSSCCCC
T ss_pred EcccchhhCEEEEEeecC--Cc-ceEEEEEECCCCcccccccce-EEEcCCeEEEECcCC--CCccceEEEEccCCcCcC
Confidence 556778999999999998 21 111112211222233556666 889999999999998 45668999998 899998
Q ss_pred ccCcEEEEeeCCeEEEEEcccCcCCCe-eEEEEEEecCcceEE-EEEEEEecCCCccccccccccceeeeeecccccccc
Q psy2145 95 IGHRFRPIHDFGYVALDIIDTIPEDSG-TYTCRAVNLVGFAEV-QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQR 172 (808)
Q Consensus 95 ~~~r~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (808)
.+.++....++ .|.|.+++.+|+| .|+|.|.|..|...+ .+.|.|...
T Consensus 158 ~~~~~~~~~~~---~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~--------------------------- 207 (524)
T 2ec8_A 158 KDLRFIPDPKA---GIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPA--------------------------- 207 (524)
T ss_dssp SSCEEEEETTT---EEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECC---------------------------
T ss_pred CCCceeECCCc---cEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeC---------------------------
Confidence 88777755433 6999999999999 999999998776533 667766421
Q ss_pred ccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeE-EEEeeCCEEc--cCCCceEEEe---cCceEEEEEc
Q psy2145 173 GEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMK-VEWFHNNVPI--KSGSRFTETN---NFGFVALDIM 246 (808)
Q Consensus 173 ~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-v~W~~~g~~l--~~~~~~~~~~---~~~~~~L~I~ 246 (808)
...+|.|...+....+.+|++++|.|.+. +.|.+. |.|+++|..+ ....+..... ..+..+|.|.
T Consensus 208 -------~~~~p~i~~~~~~~~v~~G~~v~L~C~~~--g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 278 (524)
T 2ec8_A 208 -------FKAVPVVSVSKASYLLREGEEFTVTCTIK--DVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTIS 278 (524)
T ss_dssp -------CCSCCEEECSCSEEEEETTSCEEEEEEEE--ESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEES
T ss_pred -------CCCCCcEEecCCcceEEcCCcEEEEEEEe--cCCCcEEEEEEeCCCCCccccccccccccCCccceEEEEEEC
Confidence 14688898888888999999999999995 666665 9999999883 3332222221 1234589999
Q ss_pred cCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeecc---CCC
Q psy2145 247 QCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQ---PMR 323 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~---~~~ 323 (808)
++..+|+|.|+|.|.|..|....++.|.|..+| .+.. .+.
T Consensus 279 ~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p-------------------------------------~~~~~~~~~~ 321 (524)
T 2ec8_A 279 SARVNDSGVFMCYANNTFGSANVTTTLEVVDKG-------------------------------------FINIFPMINT 321 (524)
T ss_dssp SCCTTTCEEEEEEEECSSCEEEEEEEEEEESSC-------------------------------------EEEEEESSCS
T ss_pred CCCHHHCEEEEEEEEecCCceEEEEEEEEeccC-------------------------------------ceEeecCCCc
Confidence 999999999999999999999889999987643 3322 234
Q ss_pred ceEeecCCeEEEEEEEeecCCCccE-EEEEECCEeccCCC-cEEEEeeC----cEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 324 DIHVAENQAAHFEARLIPVGDSKLK-VTWLRNGVPIQASN-RVSTMHDF----GYVALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g~p~~~-v~W~~~g~~l~~~~-~~~~~~~~----~~~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
...+.+|+.+.|.|.+ .|.|.+. |+|+++|.++.... ++....++ ...+|.|.++..+|+|.|+|.|.|..|
T Consensus 322 ~~~v~~G~~v~l~C~~--~g~P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g 399 (524)
T 2ec8_A 322 TVFVNDGENVDLIVEY--EAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV 399 (524)
T ss_dssp EEEECTTCCEEEEEEE--EEESCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred eEEEcCCCcEEEEEEE--eecCCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCc
Confidence 5788999999999998 7889988 99999999988765 44433333 356899999999999999999999999
Q ss_pred ceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCch
Q psy2145 398 EAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKG 477 (808)
Q Consensus 398 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (808)
....++.|.|..+|.+.
T Consensus 400 ~~~~~~~l~V~~~P~i~--------------------------------------------------------------- 416 (524)
T 2ec8_A 400 NAAIAFNVYVNTKPEIL--------------------------------------------------------------- 416 (524)
T ss_dssp EEEEEEEEEECEEEEEE---------------------------------------------------------------
T ss_pred eEEEEEEEEEecCCeEe---------------------------------------------------------------
Confidence 99888999887654322
Q ss_pred hhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC--------
Q psy2145 478 LEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-------- 549 (808)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-------- 549 (808)
... .+.+| .|.|.+ .|.|.|.|+|+|+|..+..
T Consensus 417 ------------------------------~~~----~~~~g---~l~C~~--~g~P~p~i~W~~~~~~~~~~~~~~~~~ 457 (524)
T 2ec8_A 417 ------------------------------TYD----RLVNG---MLQCVA--AGFPEPTIDWYFCPGTEQRCSASVLPV 457 (524)
T ss_dssp ------------------------------EEE----CCSSS---CEEEEE--EEESCCEEECCCC----------CCCC
T ss_pred ------------------------------ecc----cCcCc---EEEEEE--EeecCCEEEEEECCCcccccccccCCC
Confidence 111 13456 999999 7999999999999876621
Q ss_pred CCC---eEEEeeCcEEE-EEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 550 SSR---ITTKHDFGYVA-MDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 550 ~~~---~~~~~~~~~~~-L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
+.+ +.....+.... +.|.....+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 458 ~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V~e~~~ 513 (524)
T 2ec8_A 458 DVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513 (524)
T ss_dssp CCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC-----
T ss_pred CceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEEecCCH
Confidence 111 11122222111 22444456999999999999999999999999987543
No 24
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=5.1e-45 Score=399.13 Aligned_cols=376 Identities=19% Similarity=0.290 Sum_probs=281.4
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC-ceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS-RFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+.++.+.+|++++|.|.+.+ +.|.+.|.|+|+|..+.... ++......+ +|.|.+++.+|+|.|+|.
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~ 80 (395)
T 1bih_A 4 DKYPVLKDQPAEVLFRENNPTVLECIIEG-NDQGVKYSWKKDGKSYNWQEHNAALRKDEG--SLVFLRPQASDEGHYQCF 80 (395)
T ss_dssp -CCCEECCCCSEEEEETTSCEEECCCEES-CCSSCEEEEEESSSBCCTTTTTEEECTTSC--CEEESSCCGGGCEEEEEE
T ss_pred CCCCEeecCCCceEEeCCCEEEEEEEEec-CCCCceEEEEECCcCcccccceEEEecCCc--eEEEecCCCCCCcEEEEE
Confidence 56899999999999999999999999952 38899999999999987665 333333333 799999999999999999
Q ss_pred EEeCceeEEE-EEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 260 AVNALGQAVT-SGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 260 a~n~~g~~~~-~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
|.|..|...+ .+.|.|...+ .|.+ .+....+.+|+.+.|.|.
T Consensus 81 a~n~~g~~~s~~~~l~v~~~~-----------------------------------~p~~--~~~~~~~~~G~~v~l~C~ 123 (395)
T 1bih_A 81 AETPAGVASSRVISFRKTYLI-----------------------------------ASPA--KTHEKTPIEGRPFQLDCV 123 (395)
T ss_dssp EEETTEEEECCCEEEEEEEEE-----------------------------------CCCC--EEEEECCBTTEEEEECCC
T ss_pred EEeCCCeEEeEEEEEEEEEee-----------------------------------cCCc--CCcceeeeeCCcEEEEec
Confidence 9999887653 3566654311 2222 223556789999999998
Q ss_pred EeecCCCccEEEEEECC---EeccC----CCcEEEEeeCcEEEEEEccCCCCCCe---EEEEEEEcCCcceEEEEEEEEE
Q psy2145 339 LIPVGDSKLKVTWLRNG---VPIQA----SNRVSTMHDFGYVALNFKYTYPEDSG---TYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g---~~l~~----~~~~~~~~~~~~~~L~I~~v~~~d~G---~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
+. .+.|.+.|.|+++| .+... ..++....++ .|.|.++..+|+| .|+|.|.|..|.........+.
T Consensus 124 ~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~ 199 (395)
T 1bih_A 124 LP-NAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDG---NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEI 199 (395)
T ss_dssp CC-EEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTTS---CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEE
T ss_pred CC-CCCCCCeEEEEecCCCcCcccccccccccEEEcCCC---cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEe
Confidence 52 57888999999986 22221 3455544443 6999999999999 9999999999876543222211
Q ss_pred ecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCC
Q psy2145 409 SKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTE 488 (808)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (808)
...... .
T Consensus 200 ~~~~~~--------------------------------~----------------------------------------- 206 (395)
T 1bih_A 200 KGVTKD--------------------------------N----------------------------------------- 206 (395)
T ss_dssp CCCBCC--------------------------------S-----------------------------------------
T ss_pred cccccc--------------------------------c-----------------------------------------
Confidence 100000 0
Q ss_pred CCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEE--eeCcEEEEEE
Q psy2145 489 PHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTK--HDFGYVAMDL 566 (808)
Q Consensus 489 ~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~--~~~~~~~L~I 566 (808)
.......+|.|. +.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+.......+. .......|.|
T Consensus 207 -------~~~~~~~~p~~~--~~~~-~~~~G~~v~l~C~~--~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i 274 (395)
T 1bih_A 207 -------SGYKGEPVPQYV--SKDM-MAKAGDVTMIYCMY--GSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLF 274 (395)
T ss_dssp -------SCCCCCCEEEEE--CCSE-EEETTSCEEEEEEE--ECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEE
T ss_pred -------ccccCCcCceec--CCce-EEECCCcEEEEEEe--ccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEE
Confidence 000001133341 1222 58899999999999 79999999999999998765432222 1122237999
Q ss_pred CCCCCCCCEEEEEEEEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCC
Q psy2145 567 SHVRAEDEGIYICKATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGT 645 (808)
Q Consensus 567 ~~v~~~D~G~Y~C~a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~ 645 (808)
.++..+|+|.|+|.|.|..|.... ++.|.|..+ |.|...+...
T Consensus 275 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~------------------------------------P~~~~~~~~~ 318 (395)
T 1bih_A 275 KTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSA------------------------------------PKYEQKPEKV 318 (395)
T ss_dssp SSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEE------------------------------------EEEEECCCSE
T ss_pred ccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcC------------------------------------CccccCCCcc
Confidence 999999999999999999999766 889999865 4444444333
Q ss_pred ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
..+.+|+.+.|.|.+ .|.|.|.|.|+|||.+|..+ ++.+. ++ +|.|.++..+|+|.|+|.|.|.+|....++.
T Consensus 319 ~~~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~-~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 391 (395)
T 1bih_A 319 IVVKQGQDVTIPCKV--TGLPAPNVVWSHNAKPLSGG-RATVT--DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETL 391 (395)
T ss_dssp EEECTTSCEEEECEE--EEESCCCCEEEETTEECCSS-SEEEE--TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEecCCCeEEEEEEE--CcccCCeeEEEECCEECCCC-ceEEE--CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEE
Confidence 568899999999999 79999999999999999765 66553 33 8999999999999999999999999999999
Q ss_pred EEE
Q psy2145 726 LKV 728 (808)
Q Consensus 726 l~V 728 (808)
|.|
T Consensus 392 l~V 394 (395)
T 1bih_A 392 VQV 394 (395)
T ss_dssp EEE
T ss_pred EEE
Confidence 988
No 25
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=392.77 Aligned_cols=389 Identities=14% Similarity=0.164 Sum_probs=241.0
Q ss_pred cccccceeeeccCCCchhhhhh-hccC----------Cc-----cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceE
Q psy2145 21 KETSYHWQNVPVPEWSKEQENA-KKKK----------NF-----IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKV 84 (808)
Q Consensus 21 ~ed~g~y~c~~~~~~~~~~~~~-~~~~----------~~-----~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v 84 (808)
.+|.|.|.|...+....+.+.. ...+ .. ....+..|..+ .|.+|+++.|.|.+. +.|.+.|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~c~~~p~~~~~~~~~~~v-~V~~G~~v~L~C~v~--g~P~p~i 80 (423)
T 3qs7_E 4 NQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAV-EVDVSASITLQVLVD--APGNISC 80 (423)
T ss_dssp ----------------------------------------------------CEE-EECSSCCEEEEEECS--CCSSCEE
T ss_pred cCCCCeeEEEEEeccCCCccccccccchhhhCCHHHcCCccCCCCCcceeccccE-EEecCCcEEEEEEEE--cCCCCeE
Confidence 4688999999977744442211 1111 00 12345566677 899999999999999 5788999
Q ss_pred EEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeee
Q psy2145 85 EWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYL 164 (808)
Q Consensus 85 ~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 164 (808)
.|++++..+....++. ....+..+|.|.+++.+|+|.|+|.|.|..|.....+.|.|...
T Consensus 81 ~W~~~~~~l~~~~~~~-~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~------------------- 140 (423)
T 3qs7_E 81 LWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNT------------------- 140 (423)
T ss_dssp EEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC---------------------
T ss_pred EEEECCCccCccceec-cccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecC-------------------
Confidence 9999998876543322 12223457999999999999999999999998888888888532
Q ss_pred ccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEE
Q psy2145 165 EDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALD 244 (808)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~ 244 (808)
|.+. ......+..|+.+.|.|.+ .|.|.|.|+|+|++..+...... . ..+ .+.
T Consensus 141 -------------------p~~~-~~~p~~~~~~~~~~L~C~a--~G~P~P~i~W~k~~~~~~~~~~~-~--~~~--~~~ 193 (423)
T 3qs7_E 141 -------------------LLYT-LRRPYFRKMENQDALVCIS--ESVPEPIVEWVLCDSQGESCKEE-S--PAV--VKK 193 (423)
T ss_dssp ----------------------C-EEEEEEEECSSSSCEEEEE--EESSCCEEEEEEC----------------C--EEE
T ss_pred -------------------cccc-ccCCcEeccCCceEEEEEE--eeecCCeEEEEECCCCCcccccc-c--ccc--ccc
Confidence 2221 1112234468888999999 58899999999998865321100 0 000 011
Q ss_pred Ecc-CCCCCcEEEEEEEEeCceeEEEE-EEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCC
Q psy2145 245 IMQ-CLPEDSGVYTCRAVNALGQAVTS-GNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM 322 (808)
Q Consensus 245 I~~-~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~ 322 (808)
... +...|+|.|+|.|.|..|..... +.|.|.. +|.+ ++
T Consensus 194 ~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~-------------------------------------~p~~--~~ 234 (423)
T 3qs7_E 194 EEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ-------------------------------------TPQT--TL 234 (423)
T ss_dssp CCSEECCCCSSCEEEEEECSSCEEEEECEEEESSS-------------------------------------CCCS--ST
T ss_pred cceEEecccCeEEEEEEEcCCCCcceeeEEEEEec-------------------------------------CCcc--CC
Confidence 111 15789999999999999976552 4555532 2222 33
Q ss_pred CceEeecCCeEEEEEEEeecC-CCccEEEEEECCEeccCCCcEEEE--e----eCcEEEEEEccCCCCCCeEEEEEEEcC
Q psy2145 323 RDIHVAENQAAHFEARLIPVG-DSKLKVTWLRNGVPIQASNRVSTM--H----DFGYVALNFKYTYPEDSGTYTCRAVNE 395 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g-~p~~~v~W~~~g~~l~~~~~~~~~--~----~~~~~~L~I~~v~~~d~G~Y~C~a~n~ 395 (808)
....+.+|+.+.|.|.+ .| .|.+.|+|+|+|..+.....+... . .....+|.|.++..+|+|.|+|.|.|.
T Consensus 235 ~~~~v~~G~~v~L~C~~--~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 312 (423)
T 3qs7_E 235 PQLFLKVGEPLWIRCKA--VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (423)
T ss_dssp TEEEEETTSCEEEEEEE--EESSSCCCEEEEESSSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE
T ss_pred CceEEeCCCeEEEEEEE--EcCCCCcEEEEEECCEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC
Confidence 46778999999999999 56 677999999999988665332111 0 112237999999999999999999997
Q ss_pred CcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCC
Q psy2145 396 LGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHP 475 (808)
Q Consensus 396 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (808)
...++.|.|..++.+...
T Consensus 313 ---~~~~~~L~V~~~p~i~~~----------------------------------------------------------- 330 (423)
T 3qs7_E 313 ---PSQSALVTIVEKGFINAT----------------------------------------------------------- 330 (423)
T ss_dssp ---EEEEEEEEEESSCEEEEC-----------------------------------------------------------
T ss_pred ---CCceEEEEEEeCCcceEc-----------------------------------------------------------
Confidence 666788888755432210
Q ss_pred chhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEE
Q psy2145 476 KGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITT 555 (808)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~ 555 (808)
+......+.+|+.+.|.|.+ .|.|.|.|+|+|||..|..+.+..
T Consensus 331 ---------------------------------~~~~~~~v~~G~~v~l~C~~--~g~P~p~i~W~k~g~~l~~~~~~~- 374 (423)
T 3qs7_E 331 ---------------------------------NSSEDYEIDQYEEFCFSVRF--KAYPQIRCTWTFSRKSFPCEQKGL- 374 (423)
T ss_dssp ------------------------------------CEECCCTTCCCCEEEEE--EEESCCEEEEEETTEEEECBCCBC-
T ss_pred ---------------------------------CCCccEEecCCCeEEEEEEE--EEcCCCeEEEEECCEECCCccccc-
Confidence 00011257889999999999 799999999999999997653110
Q ss_pred EeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 556 KHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 556 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
..+. .+.+.....+|+|.|+|.|.|..|.++.++.|.|...|.
T Consensus 375 --~~~~-~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~~~p~ 417 (423)
T 3qs7_E 375 --DNGY-SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSGTK 417 (423)
T ss_dssp --SSSS-EEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC------
T ss_pred --cCCc-EEEEEecccccCEEEEEEEEcCCceEEEEEEEEEecCCc
Confidence 0111 232355677999999999999999999999999998754
No 26
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=100.00 E-value=1.1e-43 Score=386.54 Aligned_cols=363 Identities=21% Similarity=0.364 Sum_probs=275.8
Q ss_pred cceeecCCCCcccc---CCCCcEEEEEEEeeCCCCCceEEEEeCCEEeecc--CcEEEEeeCCeEEEEEcccCc-CCCee
Q psy2145 49 IYYTVTKPKSIENL---RERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIG--HRFRPIHDFGYVALDIIDTIP-EDSGT 122 (808)
Q Consensus 49 ~~~~~~~p~~~~~v---~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~--~r~~~~~~~~~~~L~I~~~~~-~D~G~ 122 (808)
.|.+...|.+. .+ .+|+.++|.|.+.+ .|.+.|.|+|+|..|..+ .++.. .++ +|.|.++.. +|+|.
T Consensus 4 ~P~~~~~p~~~-~~~~~~~g~~v~l~C~~~g--~p~~~v~W~k~g~~~~~~~~~~~~~--~~~--~L~i~~~~~~~D~G~ 76 (382)
T 1cs6_A 4 GPVFEEQPAHT-LFPEGSAEEKVTLTCRARA--NPPATYRWKMNGTELKMGPDSRYRL--VAG--DLVISNPVKAKDAGS 76 (382)
T ss_dssp EEEEEECCCCE-EEETTCSCCEEEECCEEEE--ESCCEEEEEETTEECCCSTTSSEEE--ETT--EEEEESCCHHHHCEE
T ss_pred CCEEEECCCcE-EEecCCCCCcEEEEEEecC--CCCCEEEEEECCEECCcCCCccEEe--eCC--eEEEecccccccCEE
Confidence 46677788876 44 79999999999984 688899999999998764 45543 333 699999997 99999
Q ss_pred EEEEEEecCcceEE-EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeE
Q psy2145 123 YTCRAVNLVGFAEV-QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRA 201 (808)
Q Consensus 123 Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v 201 (808)
|+|.|.|..|...+ .+.|.|...+. .....+....+.+|+++
T Consensus 77 Y~C~a~n~~g~~~s~~~~l~v~~~~~-------------------------------------~~~~~~~~~~v~~G~~v 119 (382)
T 1cs6_A 77 YQCVATNARGTVVSREASLRFGFLQE-------------------------------------FSAEERDPVKITEGWGV 119 (382)
T ss_dssp EEEEEEETTEEEECCCEEEEEEEECC-------------------------------------CCSSCCCCEEEETTSCE
T ss_pred EEEEEEcCCcEEEecceEEEeecccc-------------------------------------ccccCCCceEEecCCcE
Confidence 99999999886533 46666642211 01112446778999999
Q ss_pred EEEEEEeecCCCCeEEEEeeCCEEcc--CCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE-----EEEEE
Q psy2145 202 HFECRLIPVSDNTMKVEWFHNNVPIK--SGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT-----SGNLL 274 (808)
Q Consensus 202 ~L~C~~~~~~~p~~~v~W~~~g~~l~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~-----~~~l~ 274 (808)
+|.|.+. .+.|.+.+.|++++.++. ...+.......+ +|.|.+++.+|+|.|+|.|.|..|.... .+.|.
T Consensus 120 ~l~C~~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~ 196 (382)
T 1cs6_A 120 MFTCSPP-PHYPALSYRWLLNEFPNFIPADGRRFVSQTTG--NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLS 196 (382)
T ss_dssp EECCCCC-SEESCCEEEEEESSTTCBCCCCSSEEECTTTC--CEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEE
T ss_pred EEEeCCC-CCCCCcEEEEEECCCccccccCceEEEecCce--EEEEEeeCcccCeeEEEEEEEccccccceeEccceeec
Confidence 9999863 356788999999988753 333443333333 7999999999999999999997643222 24455
Q ss_pred EeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeecc-CCCceEeecCCeEEEEEEEeecCCCccEEEEEE
Q psy2145 275 VHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQ-PMRDIHVAENQAAHFEARLIPVGDSKLKVTWLR 353 (808)
Q Consensus 275 V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~ 353 (808)
|.... ....+|.+.. .+....+.+|+.+.|.|.+ .|.|.+.+.|++
T Consensus 197 v~~~~-------------------------------~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~~~i~W~~ 243 (382)
T 1cs6_A 197 LAAED-------------------------------ARQYAPSIKAKFPADTYALTGQMVTLECFA--FGNPVPQIKWRK 243 (382)
T ss_dssp EESCC-------------------------------CCCEEEEEEECCCSEEEEETTCCEEEECEE--EEESCCEEEEEE
T ss_pred cchhh-------------------------------cccCCCceeccCCCceEEeCCCeEEEEEEE--ccCCCCEEEEEE
Confidence 43210 0112444443 3456788999999999998 788999999999
Q ss_pred CCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhcccccc
Q psy2145 354 NGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTS 433 (808)
Q Consensus 354 ~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (808)
++..+... ..... ..|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 244 ~~~~~~~~----~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--------------------- 296 (382)
T 1cs6_A 244 LDGSQTSK----WLSSE--PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPD--------------------- 296 (382)
T ss_dssp CCSCCSCC----CSBSS--SEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE---------------------
T ss_pred CCcccccE----EecCC--cEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCC---------------------
Confidence 98776541 11122 2799999999999999999999999988888888876432
Q ss_pred ccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCc
Q psy2145 434 RFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNI 513 (808)
Q Consensus 434 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~ 513 (808)
|...+.+.
T Consensus 297 ------------------------------------------------------------------------~~~~~~~~ 304 (382)
T 1cs6_A 297 ------------------------------------------------------------------------WLDVITDT 304 (382)
T ss_dssp ------------------------------------------------------------------------EEECCCCE
T ss_pred ------------------------------------------------------------------------cccCCCcc
Confidence 22222222
Q ss_pred ccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEE
Q psy2145 514 DAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTAS 593 (808)
Q Consensus 514 ~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~ 593 (808)
.+.+|+.+.|.|.+ .|.|.+.|.|+|||..+..+.++.+. ++ .|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 305 -~~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 377 (382)
T 1cs6_A 305 -EADIGSDLRWSCVA--SGKPRPAVRWLRDGQPLASQNRIEVS--GG--ELRFSKLVLEDSGMYQCVAENKHGTVYASAE 377 (382)
T ss_dssp -EEETTCCEEEECEE--EEESCCEEEEEETTEECCCCSSEEEE--TT--EEEESSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred -EEcCCCeEEEEEEe--eeecCCEEEEEECCEECCCCceEEEE--CC--EEEECcCCcccCEEEEEEEEeCCCeEEEEEE
Confidence 57889999999999 79999999999999999988887664 33 7999999999999999999999999999999
Q ss_pred EEEE
Q psy2145 594 MKIK 597 (808)
Q Consensus 594 l~V~ 597 (808)
|.|.
T Consensus 378 l~V~ 381 (382)
T 1cs6_A 378 LTVQ 381 (382)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 27
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=100.00 E-value=1.5e-43 Score=388.82 Aligned_cols=365 Identities=21% Similarity=0.337 Sum_probs=274.9
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeecc--CcEEEEeeCCeEEEEEc----ccCcCCCeeEEEEEE
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIG--HRFRPIHDFGYVALDII----DTIPEDSGTYTCRAV 128 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~--~r~~~~~~~~~~~L~I~----~~~~~D~G~Y~C~a~ 128 (808)
.+.++ .+.+|+.++|.|.+. +.|.+.|.|+|+|..+... .++......+ +|.|. +++.+|+|.|+|.|.
T Consensus 23 ~~~~~-~v~~G~~v~l~C~~~--g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~l~i~~~~~~~~~~D~G~Y~C~a~ 97 (404)
T 3p3y_A 23 SAKDH-IVDPRDNILIECEAK--GNPAPSFHWTRNSRFFNIAKDPRVSMRRRSG--TLVIDFRSGGRPEEYEGEYQCFAR 97 (404)
T ss_dssp CCTTC-EECSSSCCCCCEEEC--CSSCCEEEEEETTEECCGGGCSSCBCCSSSC--CCBCCCTTTCCTTSSCEEEEEEEE
T ss_pred CCccE-EEcCCCCEEEEEEec--CCCCCeEEEEECCEEeeeecCCcceEecCCc--eEEEEeccCCCCccCCEEEEEEEE
Confidence 45666 899999999999998 5788899999999988654 3333333333 45554 889999999999999
Q ss_pred ecCcceE-EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 129 NLVGFAE-VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 129 n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
|..|... ..+.|.|...+ ..+...+....+.+|++++|.|.+
T Consensus 98 n~~g~~~s~~~~l~V~~~p-------------------------------------~~~~~~~~~~~v~~G~~v~l~C~~ 140 (404)
T 3p3y_A 98 NKFGTALSNRIRLQVSKSP-------------------------------------LWPKENLDPVVVQEGAPLTLQCNP 140 (404)
T ss_dssp CSSCEEEEEEEEEEECCCC-------------------------------------CCCCCCCCCEEEETTSCEEECCCC
T ss_pred cCCCeEeeeeEEEEEeccC-------------------------------------ccccCCCCCeEEccCCcEEEEeCC
Confidence 9988764 56777775322 111223345778999999999998
Q ss_pred eecCCCCeEEEEeeCCEE-ccCCCceEEEecCceEEEEEccCCCCC-cEEEEEEEEeCceeEEE---EEEEEEeeCCccc
Q psy2145 208 IPVSDNTMKVEWFHNNVP-IKSGSRFTETNNFGFVALDIMQCLPED-SGVYTCRAVNALGQAVT---SGNLLVHSKKSIQ 282 (808)
Q Consensus 208 ~~~~~p~~~v~W~~~g~~-l~~~~~~~~~~~~~~~~L~I~~~~~~D-~G~Y~C~a~n~~g~~~~---~~~l~V~~~~~i~ 282 (808)
. .+.|.+.+.|++++.. +....++....+ + +|.|.++..+| +|.|+|.|.|..|.... ...|.|...+.+
T Consensus 141 ~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~-~--~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~- 215 (404)
T 3p3y_A 141 P-PGLPSPVIFWMSSSMEPITQDKRVSQGHN-G--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGV- 215 (404)
T ss_dssp C-CCSSCCEEEEECTTSCBCCCCSSEEECTT-S--CEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCC-
T ss_pred C-CCCCCCeEEEeCCCccccCCCCcEEEcCC-C--cEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCc-
Confidence 4 4788899999998754 444455544333 3 69999999999 59999999998775432 245555432211
Q ss_pred ccccccchhhhhhhhhccccccccccccccCCCCeeccCC---CceEeecCCeEEEEEEEeecCCCccEEEEEECCEecc
Q psy2145 283 TETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM---RDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQ 359 (808)
Q Consensus 283 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~---~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~ 359 (808)
...+|.+..+. ....+.+|+.+.|.|.+ .|.|.+.+.|+++|..+.
T Consensus 216 -----------------------------~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~ 264 (404)
T 3p3y_A 216 -----------------------------AERTPSFMYPQGTASSQMVLRGMDLLLECIA--SGVPTPDIAWYKKGGDLP 264 (404)
T ss_dssp -----------------------------CCCCCCBSSSCSSEEEEEEETTSCEEEECCB--CCSSCCEEEEEETTBCCC
T ss_pred -----------------------------cccCCccccccCCCCCceEecCCCEEEEEEE--CCCCCCcEEEEECCEECC
Confidence 12345554443 24568899999999998 799999999999999987
Q ss_pred CCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhcccccccccccc
Q psy2145 360 ASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKE 439 (808)
Q Consensus 360 ~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (808)
..... ....++ +|.|.++..+|+|.|+|.|.|..|.....+.|.|..+|.
T Consensus 265 ~~~~~-~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--------------------------- 314 (404)
T 3p3y_A 265 SDKAK-FENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY--------------------------- 314 (404)
T ss_dssp TTTEE-EEGGGT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE---------------------------
T ss_pred CCccc-ccccCc--eEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCe---------------------------
Confidence 66542 222223 799999999999999999999999988888888876432
Q ss_pred ceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCC
Q psy2145 440 EEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEG 519 (808)
Q Consensus 440 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G 519 (808)
|...+.+. .+.+|
T Consensus 315 ------------------------------------------------------------------~~~~~~~~-~v~~g 327 (404)
T 3p3y_A 315 ------------------------------------------------------------------WLDEPKNL-ILAPG 327 (404)
T ss_dssp ------------------------------------------------------------------EEECCCCE-EECTT
T ss_pred ------------------------------------------------------------------eeccCCcc-eeecC
Confidence 22222232 57889
Q ss_pred CceEEEEEEeeCCCCCcEEEEEECCEecCCCCC-eEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 520 KNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSR-ITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 520 ~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
+.+.|.|.+ .|.|.+.|.|+|||..+..... ......++ +|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 328 ~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 328 EDGRLVCRA--NGNPKPTVQWMVNGEPLQSAPPNPNREVAGD--TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp CCEEEECEE--EEESCCEEEEEETTEEGGGSCCCTTEEEETT--EEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred CcEEEEEEc--cccCCCceEEEECCEecCCCCCCceEEecCC--EEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999 7899999999999999976542 12222334 799999999999999999999999999999998863
No 28
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=399.36 Aligned_cols=377 Identities=15% Similarity=0.181 Sum_probs=264.9
Q ss_pred ceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEE
Q psy2145 192 NCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSG 271 (808)
Q Consensus 192 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 271 (808)
.+.+.+|++++|.|.+ .+.|...+.|++++..+.....+.. .+.+.++|.|.+++.+|+|.|+|.|.|..|......
T Consensus 57 ~~~v~~g~~~~L~c~~--~~~~~~~~~W~~~~~~l~~~~~~~~-~~r~~~SL~I~~v~~~D~G~Y~C~~~n~~~~~~~~~ 133 (527)
T 3qs9_E 57 AVEVDVSASITLQVLV--DAPGNISCLWVFKHSSLNCQPHFDL-QNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILF 133 (527)
T ss_dssp EEEECSSCCEEEEEEC--SCCSSCEEEEEETTEEECCCCBC------CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEE
T ss_pred eEEEeccccEEEEEEE--ecCCceeEEEEecCCccCcccccCC-CcceEEEEEECcCChhhCeeEEEEEEeccccEEEEE
Confidence 7899999999999999 5777899999999998877666643 234567899999999999999999999988777766
Q ss_pred EEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEE
Q psy2145 272 NLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTW 351 (808)
Q Consensus 272 ~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W 351 (808)
.|.|.... +...........|+.+.|.|.+ .|.|.|.|+|
T Consensus 134 ~v~v~~~~--------------------------------------~~~~~~p~~~~~~~~~~L~C~a--~G~P~P~i~W 173 (527)
T 3qs9_E 134 TVSIRNTL--------------------------------------LYTLRRPYFRKMENQDALVCIS--ESVPEPIVEW 173 (527)
T ss_dssp EEEEC-------------------------------------------CEEEEEEEECSSSSCEEEEE--EESSCCEEEE
T ss_pred EEEECCce--------------------------------------eeccCCCcEEecCCceEEEEEE--ceecCCeEEE
Confidence 66664210 0011112233557778899998 8999999999
Q ss_pred EECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecccccccccchHHHhhhhccc
Q psy2145 352 LRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESKASLQLDTQNEAALQKIQNLE 430 (808)
Q Consensus 352 ~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 430 (808)
++++.++..... ............+...|+|.|+|.|.|..|...+. +.|.|...+.
T Consensus 174 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~------------------ 231 (527)
T 3qs9_E 174 VLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQ------------------ 231 (527)
T ss_dssp EEC-----------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCC------------------
T ss_pred EECCCCCccccc----cCCcEEEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCc------------------
Confidence 999877642210 11111223344456899999999999999987664 5566543321
Q ss_pred cccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecC
Q psy2145 431 DTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPL 510 (808)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~ 510 (808)
+ ++
T Consensus 232 ---------------------------------------------------------------------------~--~p 234 (527)
T 3qs9_E 232 ---------------------------------------------------------------------------T--TL 234 (527)
T ss_dssp ---------------------------------------------------------------------------C--SC
T ss_pred ---------------------------------------------------------------------------c--CC
Confidence 1 11
Q ss_pred CCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEe------eCcEEEEEECCCCCCCCEEEEEEEEeC
Q psy2145 511 QNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKH------DFGYVAMDLSHVRAEDEGIYICKATNA 584 (808)
Q Consensus 511 ~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~------~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 584 (808)
.+. .+.+|+.+.|.|.+. .|.|.+.|+|+|+|..+.....+.... .....+|.|.+++.+|+|.|+|.|.|.
T Consensus 235 ~~~-~v~~G~~v~L~C~~~-~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~ 312 (527)
T 3qs9_E 235 PQL-FLKVGEPLWIRCKAV-HVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH 312 (527)
T ss_dssp CEE-EECTTSCEEEEEEEE-ESSSCCCEEEECSSSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE
T ss_pred Cce-EEeCCCeEEEEEEEc-cCCCCeEEEEEECCEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC
Confidence 122 578999999999993 289999999999999887654332211 112236999999999999999999998
Q ss_pred CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCC
Q psy2145 585 LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVG 664 (808)
Q Consensus 585 ~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g 664 (808)
...++.|.|...|.+.+. |. .....+.+|+.+.|.|.+ .|
T Consensus 313 ---~~~~~~L~V~~~p~i~~~------------------------------~~-----~~~~~v~~G~~v~L~C~~--~g 352 (527)
T 3qs9_E 313 ---PSQSALVTIVEKGFINAT------------------------------NS-----SEDYEIDQYEEFCFSVRF--KA 352 (527)
T ss_dssp ---EEEEEEEEEC--CEEECC------------------------------CS-----CCEECCCTTCCCCEEEEE--EE
T ss_pred ---CCceEEEEEEccCccccc------------------------------cC-----cccEEEcCCCeEEEEEEE--Ee
Confidence 667788888765432211 10 112457899999999999 79
Q ss_pred CCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCccccCCChhhH
Q psy2145 665 DPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDIVSESLQPDAW 744 (808)
Q Consensus 665 ~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~~~~~~~~~~ 744 (808)
.|.|.|.|+|||+.|..+.++.. +..+|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.+......
T Consensus 353 ~P~p~i~W~k~g~~l~~~~~~~~----~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~~---- 424 (527)
T 3qs9_E 353 YPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASA---- 424 (527)
T ss_dssp ESCCEEEEEETTEEEECBCCBCS----SSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCCC----
T ss_pred cCCCEEEEEECCEECcCCccccc----CCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCCC----
Confidence 99999999999999987655322 2237999999999999999999999999999999999999987654321
Q ss_pred HHHHHhhhccCCchh---HHH
Q psy2145 745 KKIQLKEAEMNKPDA---WKK 762 (808)
Q Consensus 745 ~~i~~~~~~~~~~~~---~~~ 762 (808)
.++.|.+...|.. |.+
T Consensus 425 --~~l~C~a~g~P~p~i~W~~ 443 (527)
T 3qs9_E 425 --SQASCFSDGYPLPSWTWKK 443 (527)
T ss_dssp --E---EEEECSSCCEEEEEC
T ss_pred --CEEEEEEEEEcCCeEEEEE
Confidence 1346776666653 754
No 29
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=100.00 E-value=3e-43 Score=384.06 Aligned_cols=357 Identities=23% Similarity=0.353 Sum_probs=269.0
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe-CCEEeeccCcEEEEeeCCeEEEEEcccCcCC------Ce
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK-NGRPVTIGHRFRPIHDFGYVALDIIDTIPED------SG 121 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D------~G 121 (808)
.|.++..|.+...+.+|+.++|.|.+. |.|.+.|.|+| ||..+....++.....++ +|.|.+++.+| +|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~--g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~~~~~d~G 78 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKAS--GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQ 78 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEE--EESCCEEEEEETTSCBCCCBTTTBEECSTT--EEEECCCCGGGCCHHHHEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECC--CCCCCEEEEEcCCCCccccCCCceEEcCCc--eEEecccChhhccccccCc
Confidence 356677787754788999999999998 47888999999 888887655544444444 69999999998 99
Q ss_pred eEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCe
Q psy2145 122 TYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQR 200 (808)
Q Consensus 122 ~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~ 200 (808)
.|+|.|.|..|.. +..+.|.|. .+|.|...+....+.+|+.
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~--------------------------------------~~p~~~~~~~~~~v~~G~~ 120 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAV--------------------------------------VAQYYEADVNKEHVIRGNS 120 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEE--------------------------------------CCCCCCCBCCCEEEETTSC
T ss_pred eEEEEEEccCCeEEecceEEEEc--------------------------------------cccccccCccceeeecCCc
Confidence 9999999998864 234555553 2444555666778999999
Q ss_pred EEEEEEEeecCCC---CeEEEEeeCCEEccC-----CCceEEEecCceEEEEEccCCCCCc-EEEEEEEEeCcee-EEEE
Q psy2145 201 AHFECRLIPVSDN---TMKVEWFHNNVPIKS-----GSRFTETNNFGFVALDIMQCLPEDS-GVYTCRAVNALGQ-AVTS 270 (808)
Q Consensus 201 v~L~C~~~~~~~p---~~~v~W~~~g~~l~~-----~~~~~~~~~~~~~~L~I~~~~~~D~-G~Y~C~a~n~~g~-~~~~ 270 (808)
++|.|.+. +.+ .+.|.|++++..+.. ..++....+ + +|.|.+++.+|+ |.|+|.|.|..+. ...+
T Consensus 121 v~l~C~~~--~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~-~--~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~ 195 (388)
T 2v5m_A 121 AVIKCLIP--SFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS-G--ELHIREVGPEDGYKSYQCRTKHRLTGETRLS 195 (388)
T ss_dssp EEECCBCC--TTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTT-S--CEEESSCCGGGGGCCEEEEEEETTTCCEEEC
T ss_pred EEEEEECc--CCCCCCcceEEEEeCCCcccccccCCCCcEEEccC-C--cEEEecCCccccCeeEEEEeccCCCCceeec
Confidence 99999984 443 489999999887632 334444333 3 799999999999 9999999997543 2222
Q ss_pred ---EEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeec-cCCCceEeecCCeEEEEEEEeecCCCc
Q psy2145 271 ---GNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFT-QPMRDIHVAENQAAHFEARLIPVGDSK 346 (808)
Q Consensus 271 ---~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~G~~~~l~C~~~~~g~p~ 346 (808)
..|.|..+... .+|.+. .......+.+|+.+.|.|.+ .|.|.
T Consensus 196 ~~~~~l~v~~~~~~--------------------------------~~p~~~~~~~~~~~v~~G~~v~l~C~~--~g~p~ 241 (388)
T 2v5m_A 196 ATKGRLVITEPISS--------------------------------SAPRTPALVQKPLELMVAHTISLLCPA--QGFPA 241 (388)
T ss_dssp SSCBCEEEECCCSC--------------------------------EEEECCSSCCCCEEEETTSCEEECCCC--EEESC
T ss_pred cccceEEEecCCcC--------------------------------CCCcCccccCCceEEeeCCcEEEEEEC--CCCCC
Confidence 35555532100 112221 11234567899999999998 68899
Q ss_pred cEEEEEECCEe------ccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccch
Q psy2145 347 LKVTWLRNGVP------IQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNE 420 (808)
Q Consensus 347 ~~v~W~~~g~~------l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~ 420 (808)
+.|.|++++.. +....++.. ..+ +|.|.++..+|+|.|+|.|.|..|.....+.|.|..++.+.
T Consensus 242 p~v~W~~~~~~~~~~~~~~~~~~~~~--~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~------ 311 (388)
T 2v5m_A 242 PSFRWYKFIEGTTRKQAVVLNDRVKQ--VSG--TLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAK------ 311 (388)
T ss_dssp CEEEEEEECTTSSCEEECCCSSSEEE--ETT--EEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEE------
T ss_pred CEEEEEecCCCCcccccccccCceec--ccC--EEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccc------
Confidence 99999997543 223334432 223 79999999999999999999999998888889888653221
Q ss_pred HHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCc
Q psy2145 421 AALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNAT 500 (808)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (808)
T Consensus 312 -------------------------------------------------------------------------------- 311 (388)
T 2v5m_A 312 -------------------------------------------------------------------------------- 311 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+... .+.+|+.+.|.|.+ .|.|.+.|+|+|||..+..+. + .|.|.++..+|+|.|+|.
T Consensus 312 -------~~~~~~-~v~~g~~~~l~C~~--~g~p~p~i~W~~~g~~i~~~~--------~--~L~i~~v~~~d~G~Y~C~ 371 (388)
T 2v5m_A 312 -------IDPPTQ-TVDFGRPAVFTCQY--TGNPIKTVSWMKDGKAIGHSE--------S--VLRIESVKKEDKGMYQCF 371 (388)
T ss_dssp -------EESSEE-EECTTSCEEEEEEE--EEECCCEEEEEETTEECSCCS--------S--EEEESSCCGGGCEEEEEE
T ss_pred -------cCCCcE-EecCCCCEEEEEEe--ccccCCeEEEEECCEECccCC--------C--EEEEecCChhhCEEEEEE
Confidence 111111 57899999999999 799999999999999987543 2 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKI 596 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V 596 (808)
|.|..|....++.|.|
T Consensus 372 a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 372 VRNDRESAEASAELKL 387 (388)
T ss_dssp EECSSCEEEEEEEEEE
T ss_pred EEcCCCcEEEEEEEEe
Confidence 9999999999999887
No 30
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=1.6e-43 Score=387.26 Aligned_cols=374 Identities=22% Similarity=0.312 Sum_probs=276.3
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCc-EEEEeeCCeEEEEEcccCcCCCeeEEEEE
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHR-FRPIHDFGYVALDIIDTIPEDSGTYTCRA 127 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r-~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 127 (808)
.|.+...|.++ .+.+|+.++|.|.+.+ +.|.+.|.|+|+|..+..+.+ +.... ...+|.|.+++.+|+|.|+|.|
T Consensus 6 ~P~~~~~p~~~-~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~~~--~~~~L~i~~~~~~D~G~Y~C~a 81 (395)
T 1bih_A 6 YPVLKDQPAEV-LFRENNPTVLECIIEG-NDQGVKYSWKKDGKSYNWQEHNAALRK--DEGSLVFLRPQASDEGHYQCFA 81 (395)
T ss_dssp CCEECCCCSEE-EEETTSCEEECCCEES-CCSSCEEEEEESSSBCCTTTTTEEECT--TSCCEEESSCCGGGCEEEEEEE
T ss_pred CCEeecCCCce-EEeCCCEEEEEEEEec-CCCCceEEEEECCcCcccccceEEEec--CCceEEEecCCCCCCcEEEEEE
Confidence 45666778887 8999999999999995 478899999999999887653 33322 2337999999999999999999
Q ss_pred EecCcceEE-EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEE
Q psy2145 128 VNLVGFAEV-QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECR 206 (808)
Q Consensus 128 ~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~ 206 (808)
.|..|...+ .+.|.|... ..|.+ .+.+..+.+|+.++|.|.
T Consensus 82 ~n~~g~~~s~~~~l~v~~~------------------------------------~~p~~--~~~~~~~~~G~~v~l~C~ 123 (395)
T 1bih_A 82 ETPAGVASSRVISFRKTYL------------------------------------IASPA--KTHEKTPIEGRPFQLDCV 123 (395)
T ss_dssp EETTEEEECCCEEEEEEEE------------------------------------ECCCC--EEEEECCBTTEEEEECCC
T ss_pred EeCCCeEEeEEEEEEEEEe------------------------------------ecCCc--CCcceeeeeCCcEEEEec
Confidence 998887542 355555321 11222 334667889999999999
Q ss_pred EeecCCCCeEEEEeeCC---EEccC----CCceEEEecCceEEEEEccCCCCCcE---EEEEEEEeCceeEEEEEEEEEe
Q psy2145 207 LIPVSDNTMKVEWFHNN---VPIKS----GSRFTETNNFGFVALDIMQCLPEDSG---VYTCRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 207 ~~~~~~p~~~v~W~~~g---~~l~~----~~~~~~~~~~~~~~L~I~~~~~~D~G---~Y~C~a~n~~g~~~~~~~l~V~ 276 (808)
+. .+.|.+.|.|+++| .+... ..++....+ + +|.|.++..+|+| .|+|.|.|..|.........+.
T Consensus 124 ~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~-~--~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~ 199 (395)
T 1bih_A 124 LP-NAYPKPLITWKKRLSGADPNADVTDFDRRITAGPD-G--NLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEI 199 (395)
T ss_dssp CC-EEESCCEEEEEEEETTSCGGGCCCCCCTTEEECTT-S--CEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEE
T ss_pred CC-CCCCCCeEEEEecCCCcCcccccccccccEEEcCC-C--cEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEe
Confidence 63 36788999999986 22221 344444333 3 6999999999999 9999999988875443322221
Q ss_pred eCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCE
Q psy2145 277 SKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGV 356 (808)
Q Consensus 277 ~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~ 356 (808)
..- ... ........+|.+ .+....+.+|+.+.|.|.+ .|.|.+.+.|+++|.
T Consensus 200 ~~~--~~~----------------------~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~--~g~p~~~i~W~~~g~ 251 (395)
T 1bih_A 200 KGV--TKD----------------------NSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMY--GSNPMGYPNYFKNGK 251 (395)
T ss_dssp CCC--BCC----------------------SSCCCCCCEEEE--ECCSEEEETTSCEEEEEEE--ECSSCCCCEEEETTE
T ss_pred ccc--ccc----------------------cccccCCcCcee--cCCceEEECCCcEEEEEEe--ccCCCCeEEEEECCE
Confidence 100 000 000001123444 2456788999999999999 789999999999999
Q ss_pred eccCCC--cEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEEEEecccccccccchHHHhhhhcccccc
Q psy2145 357 PIQASN--RVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVT-SSTLFVESKASLQLDTQNEAALQKIQNLEDTS 433 (808)
Q Consensus 357 ~l~~~~--~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (808)
.+.... ++..........|.|.++..+|+|.|+|.|.|..|.... ++.|.|..+|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~--------------------- 310 (395)
T 1bih_A 252 DVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPK--------------------- 310 (395)
T ss_dssp ECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEE---------------------
T ss_pred EcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCc---------------------
Confidence 987643 333222222237999999999999999999999998766 78888886542
Q ss_pred ccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCc
Q psy2145 434 RFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNI 513 (808)
Q Consensus 434 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~ 513 (808)
|...+.+.
T Consensus 311 ------------------------------------------------------------------------~~~~~~~~ 318 (395)
T 1bih_A 311 ------------------------------------------------------------------------YEQKPEKV 318 (395)
T ss_dssp ------------------------------------------------------------------------EEECCCSE
T ss_pred ------------------------------------------------------------------------cccCCCcc
Confidence 22222221
Q ss_pred ccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEE
Q psy2145 514 DAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTAS 593 (808)
Q Consensus 514 ~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~ 593 (808)
..+.+|+.+.|.|.+ .|.|.+.|.|+|||..+..+ ++.+. ++ .|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 319 ~~~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~-~~~~~--~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~ 391 (395)
T 1bih_A 319 IVVKQGQDVTIPCKV--TGLPAPNVVWSHNAKPLSGG-RATVT--DS--GLVIKGVKNGDKGYYGCRATNEHGDKYFETL 391 (395)
T ss_dssp EEECTTSCEEEECEE--EEESCCCCEEEETTEECCSS-SEEEE--TT--EEEESSCCSTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEecCCCeEEEEEEE--CcccCCeeEEEECCEECCCC-ceEEE--CC--EEEEeeCCcccCEEEEEEEEccCCCceEEEE
Confidence 257899999999999 78999999999999999765 55543 33 7999999999999999999999999999999
Q ss_pred EEE
Q psy2145 594 MKI 596 (808)
Q Consensus 594 l~V 596 (808)
|.|
T Consensus 392 l~V 394 (395)
T 1bih_A 392 VQV 394 (395)
T ss_dssp EEE
T ss_pred EEE
Confidence 887
No 31
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=100.00 E-value=9.3e-43 Score=388.20 Aligned_cols=380 Identities=14% Similarity=0.136 Sum_probs=256.3
Q ss_pred ccccccccceeeeccCCCchhhhhhhccCCccce-eecCCCCccccCCCCcEEEEEEEeeCCCCCc---eEEEEeCCEEe
Q psy2145 18 SSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYY-TVTKPKSIENLRERGHAHFECKLEPVTDSNL---KVEWFKNGRPV 93 (808)
Q Consensus 18 ~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~---~v~W~~~g~~l 93 (808)
.++. |+| |+|.+.+..........+.....+. +...|.+. .+.+|+.++|.|.+.+ .|.+ .|.|||+|..|
T Consensus 56 ~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~-~v~~G~~v~L~C~~~g--~~~~~~~~v~W~k~g~~l 130 (450)
T 1z7z_I 56 NVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPS-WQPVGKNLTLRCQVEG--GAPRANLTVVLLRGEKEL 130 (450)
T ss_dssp EECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCS-EECTTSEEEEEEEEEC--CBCGGGEEEEEEETTEEE
T ss_pred eccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCc-eEeeCCeEEEEEEecC--CCCCcCcEEEEeeCCEEe
Confidence 3344 888 9999965443332222222222232 33456666 7899999999999994 5665 89999999998
Q ss_pred eccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccc
Q psy2145 94 TIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRG 173 (808)
Q Consensus 94 ~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (808)
..+.+.. +....+|.|.++..+|+|.|+|.|.|..|.......+.+.....+.
T Consensus 131 ~~~~~~~---~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~------------------------ 183 (450)
T 1z7z_I 131 KREPAVG---EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQ------------------------ 183 (450)
T ss_dssp EEEECCT---TTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECE------------------------
T ss_pred ecccccc---cccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCcccee------------------------
Confidence 7554221 3334589999999999999999999998754322222211100000
Q ss_pred cccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCC-C--CeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCC
Q psy2145 174 EYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSD-N--TMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLP 250 (808)
Q Consensus 174 ~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~-p--~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~ 250 (808)
.......+|.+... ..+.+|+.++|.|.+. +. | .+.+.|+++|..+.. ++....+.....+.+ +++.
T Consensus 184 --v~~~~~~~p~~~~~---~~v~~G~~v~l~C~~~--g~~P~~~~~~~W~~~~~~~~~--~~~~~~~~~~~~~~~-~v~~ 253 (450)
T 1z7z_I 184 --TFVLPATPPQLVSP---RVLEVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNP--TVTYGNDSFSAKASV-SVTA 253 (450)
T ss_dssp --ECCCCSSCCEEECC---SEEETTSEEEEEEEEE--SCTTGGGCEEEEEETTEECCC--EEEEETTEEEEEEEE-ECCG
T ss_pred --eeccCCCCCEecCc---eeEEeCCcEEEEEEee--CCCCCCceEEEEeCCCEeCCc--eEEecCCceeEEEEE-EeEh
Confidence 00001235555432 6788999999999994 55 6 789999999999876 333332221112233 7899
Q ss_pred CCcE--EEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEee
Q psy2145 251 EDSG--VYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVA 328 (808)
Q Consensus 251 ~D~G--~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~ 328 (808)
+|+| .|+|.|.|..|....++.|.|...+ +|.+... ...+.
T Consensus 254 ~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~-----------------------------------~p~i~~~--~~~v~ 296 (450)
T 1z7z_I 254 EDEGTQRLTCAVILGNQSQETLQTVTIYSFP-----------------------------------APNVILT--KPEVS 296 (450)
T ss_dssp GGCEEEEEEEEEEETTEEEEEEEEEEEECCC-----------------------------------CCEEEES--CSEEE
T ss_pred hhCCcEEEEEEEccCCccEEEEEEEEEecCC-----------------------------------CCeEecC--CeeEe
Confidence 9999 9999999999999889999987532 3555432 45789
Q ss_pred cCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCc-c---eEEEEE
Q psy2145 329 ENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELG-E---AVTSST 404 (808)
Q Consensus 329 ~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g-~---~~~~~~ 404 (808)
+|+.+.|.|.+ . |.+.++| +|.++... +....|.|..+..+|+|.|+|.|.|..| . ...++.
T Consensus 297 ~G~~v~l~C~~--~--p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~ 362 (450)
T 1z7z_I 297 EGTEVTVKCEA--H--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRE 362 (450)
T ss_dssp TTCEEEEEEEC------------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCcEEEEEec--C--CCCEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEE
Confidence 99999999997 3 8899999 88877221 1223699999999999999999997665 3 335677
Q ss_pred EEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhccc
Q psy2145 405 LFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKL 484 (808)
Q Consensus 405 l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (808)
|.|..+|.+.
T Consensus 363 l~V~~~P~~~---------------------------------------------------------------------- 372 (450)
T 1z7z_I 363 LRVLYGPRLD---------------------------------------------------------------------- 372 (450)
T ss_dssp CEEEEEEECC----------------------------------------------------------------------
T ss_pred EEEecCCcee----------------------------------------------------------------------
Confidence 8887655432
Q ss_pred ccCCCCCCCCcCCCCccCCCeeeecCC-CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEE
Q psy2145 485 EDTEPHKRPEVDDNATKQRPVFTKPLQ-NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVA 563 (808)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~P~f~~~~~-~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~ 563 (808)
.... ....+.+|+.+.|.|.+ .|.|.|.|+|+|+|..+..... .
T Consensus 373 -----------------------~~~~p~~~~~~~g~~~~l~C~~--~g~P~p~i~W~~~g~~~~~~g~----------~ 417 (450)
T 1z7z_I 373 -----------------------ERDCPGNWTWPENSQQTPMCQA--WGNPLPELKCLKDGTFPLPIGE----------S 417 (450)
T ss_dssp -----------------------STTSCSEEEEETTCEECCCCCC--EEESCCEEEEEETTTEECCTTS----------C
T ss_pred -----------------------eccCCCceeEcCCCeEEEEEec--ccCCCCcEEEEECCcccCCCCC----------e
Confidence 1110 11157889999999999 8999999999999984433221 1
Q ss_pred EEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 564 MDLSHVRAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 564 L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
| +++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 418 ~---~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 449 (450)
T 1z7z_I 418 V---TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 449 (450)
T ss_dssp E---ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred E---eEehhhCeEEEEEEEeCCCceeEEEEEEEEc
Confidence 2 5788999999999999999999999999975
No 32
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=385.54 Aligned_cols=372 Identities=17% Similarity=0.235 Sum_probs=261.2
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EEcc------------CCCceEEEecCceEEEEEccCCCCCc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VPIK------------SGSRFTETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~l~------------~~~~~~~~~~~~~~~L~I~~~~~~D~ 253 (808)
..|..+.+.+|++++|.|.+ .+.|.+.|.|||++ ..+. ...|+.....++..+|.|.+++.+|+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (523)
T 2rcj_C 5 TQPPSASGTPGQRVTISCTG--TSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDE 82 (523)
T ss_pred ccCCceEEecCCcEEEEEEE--eccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhC
Confidence 35667889999999999999 56788999999974 2211 12456655556667899999999999
Q ss_pred EEEEEEEEeCceeE---EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecC
Q psy2145 254 GVYTCRAVNALGQA---VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAEN 330 (808)
Q Consensus 254 G~Y~C~a~n~~g~~---~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G 330 (808)
|.|+|.|.|..|.. ...+.|.|...+ ..+|.+...+....+.+|
T Consensus 83 G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~---------------------------------~~~P~~~~~~~~~~~~~g 129 (523)
T 2rcj_C 83 SDYYCASWNSSDNSYVFGTGTKVTVLGQP---------------------------------KANPTVTLFPPSSEELQA 129 (523)
T ss_pred EEEEEEEccCCCccccccCceEEEeccCC---------------------------------CcCCeEEecCCcccccCC
Confidence 99999999987632 245677774321 135666555555566789
Q ss_pred CeEEEEEEEeecCCCc--cEEEEEECCEeccCCCcEEE--EeeCcE----EEEEEccCCCCCCeEEEEEEEcCCcceEEE
Q psy2145 331 QAAHFEARLIPVGDSK--LKVTWLRNGVPIQASNRVST--MHDFGY----VALNFKYTYPEDSGTYTCRAVNELGEAVTS 402 (808)
Q Consensus 331 ~~~~l~C~~~~~g~p~--~~v~W~~~g~~l~~~~~~~~--~~~~~~----~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~ 402 (808)
+.+.|.|.+ .|.|+ +.|+|+|||.++..+.+... ...++. ..|.|.++..+|+|.|+|.|.|..|.....
T Consensus 130 ~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 207 (523)
T 2rcj_C 130 NKATLVCLI--SDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKT 207 (523)
T ss_pred CceEEEEEe--ccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccc
Confidence 999999999 66654 49999999998876543221 112221 369999999999999999999998865544
Q ss_pred EEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhc
Q psy2145 403 STLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIR 482 (808)
Q Consensus 403 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (808)
+.+.+...
T Consensus 208 ~~~~~~~~------------------------------------------------------------------------ 215 (523)
T 2rcj_C 208 VAPTECSA------------------------------------------------------------------------ 215 (523)
T ss_pred eeeeecCC------------------------------------------------------------------------
Confidence 43322100
Q ss_pred ccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCC-CCc-EEEEEECCEecCCCCCeEEEeeCc
Q psy2145 483 KLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD-PTL-KVEWFRNEKPLEDSSRITTKHDFG 560 (808)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~~-~v~W~k~g~~l~~~~~~~~~~~~~ 560 (808)
...+|.+...... ..+.+|+.+.|.|.+ .|. |.+ .|+|+|+|..+...........++
T Consensus 216 -----------------~~~~P~v~~~~~~-~~~~~G~~~~l~C~~--~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g 275 (523)
T 2rcj_C 216 -----------------STKGPSVFPLAPS-SKSTSGGTAALGCLV--KDYFPQPVTVSWNSGALTSGVHTFPAVLQSSG 275 (523)
T ss_pred -----------------CCcCCEEEecCCC-cccccCCceEEEEEE--eceeCCCeEEEEecCCcccceEeCCcEecCCC
Confidence 0112333321111 246789999999999 665 877 899999998764321111112222
Q ss_pred ----EEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC
Q psy2145 561 ----YVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP 636 (808)
Q Consensus 561 ----~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P 636 (808)
...|.|.++..+| |.|+|.|.|..|.....+.|.|... |
T Consensus 276 ~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~------------------------------------P 318 (523)
T 2rcj_C 276 LYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL------------------------------------P 318 (523)
T ss_pred cEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcC------------------------------------c
Confidence 2379999999999 9999999999998877776665432 3
Q ss_pred eEEeecCCCc-cccCCceEEEEEEEeeCCCC----CeEEEEEECCEEccCCCcEEEE-EeCC----EEEEEEccCCCCCc
Q psy2145 637 IFTQLLTGTS-EIMEGQSAHYDCRVVPVGDP----TMRFEWFVNGVELKMGSRFHVQ-HDFG----YVTLDITKCVPADS 706 (808)
Q Consensus 637 ~~~~~~~~~~-~v~~G~~v~l~C~v~~~g~P----~p~i~W~~~g~~l~~~~~~~~~-~~~~----~~~L~I~~v~~~D~ 706 (808)
.+........ .+.+|+.+.|.|.+ .|.| .+.|.|+|||..+..+...... ..++ .+.|.|.++..+|+
T Consensus 319 ~~~~~~p~~~~~v~~g~~~~l~C~~--~g~~p~~~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 396 (523)
T 2rcj_C 319 SVFLFPPKPKDTLMISRTPEVTCVV--VDVSHEDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDG 396 (523)
T ss_pred eEEecCCCchhhcccCCceEEEEEE--ecccCCCCceEEEEEECCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCC
Confidence 2222212122 37889999999999 6754 3699999999999766543221 1222 24699999999999
Q ss_pred EEEEEEEEeCCcceEEEEEEE
Q psy2145 707 GVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 707 G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
|.|+|.|.|..|....+..|.
T Consensus 397 G~Y~C~a~n~~~~~~~~~~~~ 417 (523)
T 2rcj_C 397 KEYKCKVSNKALPAPIEKTIS 417 (523)
T ss_pred CeEEEEEeCCCCCCceeEEEE
Confidence 999999999998877666665
No 33
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=7e-40 Score=340.90 Aligned_cols=280 Identities=25% Similarity=0.479 Sum_probs=245.0
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
.||.|...+....+.+|+.+.|.|.+ .|.|.+.|+|+++|..+..+.++.+....+...|.|.++..+|+|.|+|.|.
T Consensus 4 ~pP~~~~~p~~~~~~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~ 81 (284)
T 2rik_A 4 APPFFDLKPVSVDLALGESGTFKCHV--TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYAS 81 (284)
T ss_dssp CCCEEEECCCCEEEETTCCEEEEEEE--ESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEccccceEecCCCcEEEEEEE--EcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEE
Confidence 48899888889999999999999999 6889999999999999998888777666677799999999999999999999
Q ss_pred cCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEeccc
Q psy2145 394 NELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQ 473 (808)
Q Consensus 394 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 473 (808)
|..|....++.|.|..+|
T Consensus 82 n~~g~~~~~~~l~V~~~p-------------------------------------------------------------- 99 (284)
T 2rik_A 82 NVAGKDSCSAQLGVQEPP-------------------------------------------------------------- 99 (284)
T ss_dssp ETTEEEEEEEEEEEECCC--------------------------------------------------------------
T ss_pred ECCceEEEEEEEEccCCC--------------------------------------------------------------
Confidence 999998888888887543
Q ss_pred CCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCe
Q psy2145 474 HPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRI 553 (808)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~ 553 (808)
.|...+.....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+....++
T Consensus 100 -------------------------------~~~~~~~~~~~v~~g~~~~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~ 146 (284)
T 2rik_A 100 -------------------------------RFIKKLEPSRIVKQDEHTRYECKI--GGSPEIKVLWYKDETEIQESSKF 146 (284)
T ss_dssp -------------------------------EEEECCCSEEEEETTCCEEEEEEE--ESSSCCEEEEEETTEECCCSSSE
T ss_pred -------------------------------cccccCCCceEecCCceEEEEEEE--eeeCCCEEEEEECCEECcCCCcE
Confidence 222222222257899999999999 78999999999999999988888
Q ss_pred EEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCcccc
Q psy2145 554 TTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQY 633 (808)
Q Consensus 554 ~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~ 633 (808)
......+...|.|.+++.+|+|.|+|.|.|..|....++.|.|..+|.+
T Consensus 147 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~------------------------------- 195 (284)
T 2rik_A 147 RMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF------------------------------- 195 (284)
T ss_dssp EEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBC-------------------------------
T ss_pred EEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcc-------------------------------
Confidence 8777777779999999999999999999999999999999999875443
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
...+ ....+.+|+.+.|.|.+ .|.|.|.|.|++||..+..+.++.+..++...+|.|.++..+|+|.|+|.|
T Consensus 196 -----~~~~-~~~~~~~g~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a 267 (284)
T 2rik_A 196 -----RKKP-HPVETLKGADVHLECEL--QGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKA 267 (284)
T ss_dssp -----CSCC-CCEEECTTCCEEEEEEC--BSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred -----eeCC-CcceecCCCeEEEEEEE--EecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 2221 12457789999999999 799999999999999999999999998888899999999999999999999
Q ss_pred EeCCcceEEEEEEEEE
Q psy2145 714 INRAGEAVSSTSLKVK 729 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~ 729 (808)
.|.+|..+.++.|.|+
T Consensus 268 ~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 268 SNDVGSYTCVGSITLK 283 (284)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EeCCCceeEEEEEEEc
Confidence 9999999999999986
No 34
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.8e-38 Score=330.18 Aligned_cols=280 Identities=25% Similarity=0.482 Sum_probs=244.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..||.|...+.++.+.+|++++|.|.+ .+.|.+.|.|+|+|..+..+.++......+..+|.|.+++.+|+|.|+|.|
T Consensus 3 ~~pP~~~~~p~~~~~~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 3 MAPPFFDLKPVSVDLALGESGTFKCHV--TGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCCEEEECCCCEEEETTCCEEEEEEE--ESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCEEEccccceEecCCCcEEEEEEE--EcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 468999999999999999999999999 577888999999999998888887776666779999999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCC-CceEeecCCeEEEEEEE
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM-RDIHVAENQAAHFEARL 339 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~-~~~~v~~G~~~~l~C~~ 339 (808)
.|..|....++.|.|.. +|.+...+ ....+.+|+.+.|.|.+
T Consensus 81 ~n~~g~~~~~~~l~V~~-------------------------------------~p~~~~~~~~~~~v~~g~~~~l~C~~ 123 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQE-------------------------------------PPRFIKKLEPSRIVKQDEHTRYECKI 123 (284)
T ss_dssp EETTEEEEEEEEEEEEC-------------------------------------CCEEEECCCSEEEEETTCCEEEEEEE
T ss_pred EECCceEEEEEEEEccC-------------------------------------CCcccccCCCceEecCCceEEEEEEE
Confidence 99999988888998875 44444333 34568899999999999
Q ss_pred eecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccc
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQN 419 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~ 419 (808)
.|.|.+.+.|+++|..+....++......+...|.|.++..+|+|.|+|.|.|..|....++.|.|..+|.+
T Consensus 124 --~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~------ 195 (284)
T 2rik_A 124 --GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVF------ 195 (284)
T ss_dssp --ESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBC------
T ss_pred --eeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcc------
Confidence 788999999999999999888877776667779999999999999999999999999888888888764322
Q ss_pred hHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCC
Q psy2145 420 EAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNA 499 (808)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (808)
T Consensus 196 -------------------------------------------------------------------------------- 195 (284)
T 2rik_A 196 -------------------------------------------------------------------------------- 195 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
...+... .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..+.++.+..++....|.|.++..+|+|.|+|
T Consensus 196 -------~~~~~~~-~~~~g~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 265 (284)
T 2rik_A 196 -------RKKPHPV-ETLKGADVHLECEL--QGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQC 265 (284)
T ss_dssp -------CSCCCCE-EECTTCCEEEEEEC--BSSSCCEEEEEETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred -------eeCCCcc-eecCCCeEEEEEEE--EecCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEE
Confidence 2222222 47789999999999 8999999999999999999999988888877899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIK 597 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~ 597 (808)
.|.|..|..+.++.|.|+
T Consensus 266 ~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 266 KASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEEETTEEEEEEEEEEEC
T ss_pred EEEeCCCceeEEEEEEEc
Confidence 999999999999999885
No 35
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=1e-40 Score=370.38 Aligned_cols=373 Identities=18% Similarity=0.230 Sum_probs=258.7
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCCC----eEEEEeeC--CEEc------------cCCCceEEEecCceEEEEEc
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDNT----MKVEWFHN--NVPI------------KSGSRFTETNNFGFVALDIM 246 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~----~~v~W~~~--g~~l------------~~~~~~~~~~~~~~~~L~I~ 246 (808)
.|...|..+.+.+|++++|.|.+ .+.+. +.|.|||+ |..+ ....++.....++..+|.|.
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (438)
T 1qgc_4 3 VLTQSPASLAVSLGQRATISCRA--SESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTID 80 (438)
T ss_dssp CEEEECSEEEECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEES
T ss_pred ceEecCCeEEeeCCCCEEEEEec--CCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeC
Confidence 35566788899999999999998 56665 48999996 3322 12356666666677799999
Q ss_pred cCCCCCcEEEEEEEEeCceeE-EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCce
Q psy2145 247 QCLPEDSGVYTCRAVNALGQA-VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDI 325 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~ 325 (808)
+++.+|+|.|+|.|.|..|.. ...+.|.|... ..+|.+.......
T Consensus 81 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~----------------------------------~~~P~v~~~~~~~ 126 (438)
T 1qgc_4 81 PVEADDVATYYCQQSNEVPLTFGAGTKLDLKRA----------------------------------DAAPTVSIFPPSS 126 (438)
T ss_dssp SCCGGGCEEEEEEECSSTTCCBCCCEEEEECCC----------------------------------CBCCEEEEECCCH
T ss_pred CCcCcCCeeEEEEEecCCCccccCceeEEecCC----------------------------------CCCCEEEecCCCh
Confidence 999999999999999987643 33466776431 1255555433333
Q ss_pred EeecCCeEEEEEEEeecC-CCcc-EEEEEECCEeccCCCcE--EEEe--eCc---EEEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 326 HVAENQAAHFEARLIPVG-DSKL-KVTWLRNGVPIQASNRV--STMH--DFG---YVALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 326 ~v~~G~~~~l~C~~~~~g-~p~~-~v~W~~~g~~l~~~~~~--~~~~--~~~---~~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
...+|+.+.|.|.+ .| .|.+ .|+|+|||.++..+... .... ++. ...|.|.++..+|+|.|+|.|.|..
T Consensus 127 ~~~~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~ 204 (438)
T 1qgc_4 127 EQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 204 (438)
T ss_dssp HHHHTTEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETT
T ss_pred hhccCCceEEEEEE--ccccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecc
Confidence 34578899999998 44 6766 99999999998765211 1111 111 2479999999999999999999998
Q ss_pred cceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCc
Q psy2145 397 GEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPK 476 (808)
Q Consensus 397 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (808)
|.... .+.+....
T Consensus 205 ~~~~~--~~~~~~~~----------------------------------------------------------------- 217 (438)
T 1qgc_4 205 STSPI--VKSFNRNE----------------------------------------------------------------- 217 (438)
T ss_dssp CSSCE--EEEEETTC-----------------------------------------------------------------
T ss_pred cCCce--eccccccc-----------------------------------------------------------------
Confidence 87532 22222100
Q ss_pred hhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEecC----
Q psy2145 477 GLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPLE---- 548 (808)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l~---- 548 (808)
++.+...+... .+.+|+.+.|.|.+ .|.| .+.|.|+|+ |+.+.
T Consensus 218 --------------------------~~~~~~~~~~~-~v~~G~~v~L~C~~--~g~p~~~~~v~W~k~~~g~~~~~~~~ 268 (438)
T 1qgc_4 218 --------------------------CEVMLVESGGG-LVKPGGSLKLSCTA--SGFIFNRCAMSWVRQTPEKRLEWVAT 268 (438)
T ss_dssp ---------------------------CCEEEEECCE-EECTTCCEEEEEEE--ESSCGGGSCEEEEEEETTTEEEEEEE
T ss_pred --------------------------ceeEEecCCce-EEecCCcEEEEEEE--cccccCCcEEEEEECCCCCCcEEEEE
Confidence 00111111122 47899999999999 7888 678999997 54332
Q ss_pred -------------CCCCeEEEee--CcEEEEEECCCCCCCCEEEEEEEEeCCe-----eEEEEEEEEEEecccccccccC
Q psy2145 549 -------------DSSRITTKHD--FGYVAMDLSHVRAEDEGIYICKATNALG-----EAVTTASMKIKTKAGLQLETQH 608 (808)
Q Consensus 549 -------------~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~a~N~~G-----~~~~s~~l~V~~~~~i~~~~~~ 608 (808)
...++.+..+ .+...|.|.+++.+|+|.|+|.|.|..| .......|.|...+.
T Consensus 269 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~------- 341 (438)
T 1qgc_4 269 ISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKT------- 341 (438)
T ss_dssp ECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCC-------
T ss_pred EeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCC-------
Confidence 2356666654 3466899999999999999999999554 222345666653211
Q ss_pred cccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEE
Q psy2145 609 PEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFH 686 (808)
Q Consensus 609 p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~ 686 (808)
.+|.+...... ..+.+|+.++|.|.+ .|. |.| .|.|++||..+.......
T Consensus 342 -------------------------~~P~v~~~~~~-~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~g~~~~~~~~~~ 393 (438)
T 1qgc_4 342 -------------------------TPPSVYPLAPG-SAAAAASMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPA 393 (438)
T ss_dssp -------------------------BCCEEEEECCC-GGGCCSSEEEEEEEE--ESCBSSCCEEEEGGGTCCSSEEECCC
T ss_pred -------------------------CCCeEEEcCcc-cccccCCcEEEEEEe--ccccCCCcEEEEecCCCCCceeecCc
Confidence 23555444333 457789999999999 687 888 999999998876321111
Q ss_pred EEEeCC---EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 687 VQHDFG---YVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 687 ~~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
+...+. .+.|.|.++..+| |.|+|.|.|.+|....+..|.
T Consensus 394 ~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i~ 436 (438)
T 1qgc_4 394 VLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIV 436 (438)
T ss_dssp EEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEECC
T ss_pred cccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeecC
Confidence 122211 2369999999889 999999999999887776654
No 36
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=100.00 E-value=3.8e-40 Score=365.77 Aligned_cols=371 Identities=15% Similarity=0.204 Sum_probs=257.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCC----ceEEEEeC--CEEee------------ccCcEEEEeeCCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSN----LKVEWFKN--GRPVT------------IGHRFRPIHDFGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~----~~v~W~~~--g~~l~------------~~~r~~~~~~~~~~~L~I~~ 114 (808)
...|..+ .+.+|++++|.|.+. +.|. +.|.|||+ |..+. ...|+....+++..+|.|.+
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (438)
T 1qgc_4 5 TQSPASL-AVSLGQRATISCRAS--ESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDP 81 (438)
T ss_dssp EEECSEE-EECTTSCEEEEEEES--SCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESS
T ss_pred EecCCeE-EeeCCCCEEEEEecC--CCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCC
Confidence 4457777 899999999999987 4554 48999996 33221 24678777777788999999
Q ss_pred cCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCce
Q psy2145 115 TIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNC 193 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~ 193 (808)
++.+|+|.|+|.|.|..+.. ...+.|.|... ..+|.+...+...
T Consensus 82 v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~-----------------------------------~~~P~v~~~~~~~ 126 (438)
T 1qgc_4 82 VEADDVATYYCQQSNEVPLTFGAGTKLDLKRA-----------------------------------DAAPTVSIFPPSS 126 (438)
T ss_dssp CCGGGCEEEEEEECSSTTCCBCCCEEEEECCC-----------------------------------CBCCEEEEECCCH
T ss_pred CcCcCCeeEEEEEecCCCccccCceeEEecCC-----------------------------------CCCCEEEecCCCh
Confidence 99999999999999987643 34456666321 3467777655554
Q ss_pred eecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCce--EEE-ecCc----eEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 194 EIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRF--TET-NNFG----FVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 194 ~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~--~~~-~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
.+.+|+.++|.|.+.+ +.|.+ .|.|+|||.++..+... ... ..++ ...|.|.++..+|+|.|+|.|.|..|
T Consensus 127 ~~~~g~~~~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 205 (438)
T 1qgc_4 127 EQLTSGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 205 (438)
T ss_dssp HHHHTTEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred hhccCCceEEEEEEcc-ccCCCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEeccc
Confidence 5557889999999953 35665 99999999998765211 111 1112 23799999999999999999999887
Q ss_pred eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCC
Q psy2145 266 QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDS 345 (808)
Q Consensus 266 ~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p 345 (808)
..... +.+... .++.....+....+.+|+.+.|.|.+ .|.|
T Consensus 206 ~~~~~--~~~~~~-----------------------------------~~~~~~~~~~~~~v~~G~~v~L~C~~--~g~p 246 (438)
T 1qgc_4 206 TSPIV--KSFNRN-----------------------------------ECEVMLVESGGGLVKPGGSLKLSCTA--SGFI 246 (438)
T ss_dssp SSCEE--EEEETT-----------------------------------C-CCEEEEECCEEECTTCCEEEEEEE--ESSC
T ss_pred CCcee--cccccc-----------------------------------cceeEEecCCceEEecCCcEEEEEEE--cccc
Confidence 65332 233210 12222233445678999999999999 6777
Q ss_pred --ccEEEEEEC--CEecc-----------------CCCcEEEEee--CcEEEEEEccCCCCCCeEEEEEEEcCCc-----
Q psy2145 346 --KLKVTWLRN--GVPIQ-----------------ASNRVSTMHD--FGYVALNFKYTYPEDSGTYTCRAVNELG----- 397 (808)
Q Consensus 346 --~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~n~~g----- 397 (808)
.+.|.|+|+ |..+. ...++.+..+ .+..+|.|.++..+|+|.|+|.|.|..|
T Consensus 247 ~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~ 326 (438)
T 1qgc_4 247 FNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFA 326 (438)
T ss_dssp GGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCC
T ss_pred cCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccce
Confidence 689999996 54332 1356666554 3466899999999999999999999544
Q ss_pred ceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCch
Q psy2145 398 EAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKG 477 (808)
Q Consensus 398 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (808)
.....+.|.|...+
T Consensus 327 ~~~~~~~l~V~~~~------------------------------------------------------------------ 340 (438)
T 1qgc_4 327 YWGQGTVVTVSAAK------------------------------------------------------------------ 340 (438)
T ss_dssp SBCCCEEEEECSSC------------------------------------------------------------------
T ss_pred eeCCCEEEEEecCC------------------------------------------------------------------
Confidence 11223455554211
Q ss_pred hhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCC-CCc-EEEEEECCEecCCCCCeEE
Q psy2145 478 LEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD-PTL-KVEWFRNEKPLEDSSRITT 555 (808)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~~-~v~W~k~g~~l~~~~~~~~ 555 (808)
..+|.+....... .+.+|+.++|.|.+ .|. |.+ .|.|+|+|..+.......+
T Consensus 341 -----------------------~~~P~v~~~~~~~-~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~g~~~~~~~~~~~ 394 (438)
T 1qgc_4 341 -----------------------TTPPSVYPLAPGS-AAAAASMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAV 394 (438)
T ss_dssp -----------------------CBCCEEEEECCCG-GGCCSSEEEEEEEE--ESCBSSCCEEEEGGGTCCSSEEECCCE
T ss_pred -----------------------CCCCeEEEcCccc-ccccCCcEEEEEEe--ccccCCCcEEEEecCCCCCceeecCcc
Confidence 0123222222222 46789999999999 676 887 9999999988763211111
Q ss_pred EeeCcE---EEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEE
Q psy2145 556 KHDFGY---VAMDLSHVRAEDEGIYICKATNALGEAVTTASM 594 (808)
Q Consensus 556 ~~~~~~---~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l 594 (808)
...+.+ ..|.|.++..+| |.|+|.|.|..|.......|
T Consensus 395 ~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~~~~~~~i 435 (438)
T 1qgc_4 395 LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKI 435 (438)
T ss_dssp EETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGTEEEEEEC
T ss_pred ccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCCcceeeec
Confidence 122211 259999999889 99999999999987766554
No 37
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=1.5e-40 Score=359.09 Aligned_cols=315 Identities=17% Similarity=0.195 Sum_probs=244.1
Q ss_pred eeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEcc--------------CCCceEEEe---cCceEEEEEccCCCCCcEE
Q psy2145 193 CEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIK--------------SGSRFTETN---NFGFVALDIMQCLPEDSGV 255 (808)
Q Consensus 193 ~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~--------------~~~~~~~~~---~~~~~~L~I~~~~~~D~G~ 255 (808)
+.+.+|++++|.|.+ .+.|.+.|.|+|+|..+. ...++.... ..+..+|.|.+++.+|+|.
T Consensus 4 v~~~~G~~v~L~C~~--~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~ 81 (363)
T 1wio_A 4 VLGKKGDTVELTCTA--SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 81 (363)
T ss_dssp EEEETTSCEEECCCC--TTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEE
T ss_pred EEEeCCCeEEEEEEe--cCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEE
Confidence 568899999999998 588999999999986421 122333322 2344579999999999999
Q ss_pred EEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEE
Q psy2145 256 YTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHF 335 (808)
Q Consensus 256 Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l 335 (808)
|+|.|.|..+ .+.|.|... ...+ ...+.+|+.+.|
T Consensus 82 Y~C~~~n~~~----~~~l~V~~~----------------------------------------~~~~-~~~v~~G~~v~l 116 (363)
T 1wio_A 82 YICEVEDQKE----EVQLLVFGL----------------------------------------TANS-DTHLLQGQSLTL 116 (363)
T ss_dssp EEEEETTEEE----EEEEEEEEE----------------------------------------EESS-CSSEESBSCEEE
T ss_pred EEEEEEECCC----cEEEEEEeC----------------------------------------CCCC-ceEEecCCCEEE
Confidence 9999988643 566666530 0111 235689999999
Q ss_pred EEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccc
Q psy2145 336 EARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQL 415 (808)
Q Consensus 336 ~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~ 415 (808)
.|.+ .+.|.+.|.|+++|..+. ...+ .|.|.++..+|+|.|+|.|.|..+.....+.|.|...+...
T Consensus 117 ~C~~--~~~p~~~v~W~~~~~~~~--------~~~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~- 183 (363)
T 1wio_A 117 TLES--PPGSSPSVQCRSPRGKNI--------QGGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS- 183 (363)
T ss_dssp EEEC--CTTCCCCEEEECSSSCEE--------EESS--EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE-
T ss_pred EEEc--CCCCCCeEEEEcCCCccc--------ccce--EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC-
Confidence 9998 688999999999986541 1222 79999999999999999999987776666666665432110
Q ss_pred cccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCc
Q psy2145 416 DTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEV 495 (808)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (808)
T Consensus 184 -------------------------------------------------------------------------------- 183 (363)
T 1wio_A 184 -------------------------------------------------------------------------------- 183 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCC-----CCCcEEEEEECCEecCC--------CCCeEEEe-----
Q psy2145 496 DDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG-----DPTLKVEWFRNEKPLED--------SSRITTKH----- 557 (808)
Q Consensus 496 ~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g-----~P~~~v~W~k~g~~l~~--------~~~~~~~~----- 557 (808)
....+.+|+.+.|.|.+ .+ .|.+.|+|+|+|..+.. +.++.+..
T Consensus 184 ----------------~~~~~~~G~~v~l~C~~--~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (363)
T 1wio_A 184 ----------------SIVYKKEGEQVEFSFPL--AFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDP 245 (363)
T ss_dssp ----------------EEEEEETBCCEEEECCC--CCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSS
T ss_pred ----------------CceEEecCCEEEEEEEE--ecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccch
Confidence 01147789999999988 56 78999999999998876 45555432
Q ss_pred -----eCcEEEEEECCCCCCCCEEEEEEEEeC--CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCc
Q psy2145 558 -----DFGYVAMDLSHVRAEDEGIYICKATNA--LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPE 630 (808)
Q Consensus 558 -----~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~ 630 (808)
..+...|.|.++..+|+|.|+|.|.|. .|.....+.|.|...
T Consensus 246 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v------------------------------- 294 (363)
T 1wio_A 246 KLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA------------------------------- 294 (363)
T ss_dssp CCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE-------------------------------
T ss_pred hhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe-------------------------------
Confidence 233448999999999999999999999 999988888888621
Q ss_pred cccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeE--EEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEE
Q psy2145 631 RQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMR--FEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGV 708 (808)
Q Consensus 631 ~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~--i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 708 (808)
.|+.+.|.|.+ .|.|.|. |.|+|||..+..+ ..|.|.++..+|+|.
T Consensus 295 -------------------~g~~~~l~C~~--~g~p~p~~~i~W~~~~~~~~~~-----------~~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 295 -------------------TQLQKNLTCEV--WGPTSPKLMLSLKLENKEAKVS-----------KREKAVWVLNPEAGM 342 (363)
T ss_dssp -------------------CCCSSSEEEEE--ESSCCTTCCEEEECSSSSCSEE-----------ESSSEEEESSCCSEE
T ss_pred -------------------cCCCeeEEEEE--ccccCCCccEEEEeCCCceeee-----------eeeeeeeecccccee
Confidence 18889999999 7888888 9999999888642 257889999999999
Q ss_pred EEEEEEeCCcceEEEEEEEEE
Q psy2145 709 YMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 709 Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
|+|.|+|. |....++.|.|.
T Consensus 343 Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 343 WQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp EEEEECSS-SSCCEEEEEEEC
T ss_pred EEEEEecC-CeEEEecceEec
Confidence 99999975 777778888774
No 38
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=100.00 E-value=4.9e-40 Score=355.01 Aligned_cols=314 Identities=16% Similarity=0.204 Sum_probs=244.0
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec--------------cCcEEEEe---eCCeEEEEEcccCcCCCeeE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI--------------GHRFRPIH---DFGYVALDIIDTIPEDSGTY 123 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~--------------~~r~~~~~---~~~~~~L~I~~~~~~D~G~Y 123 (808)
.+.+|++++|.|.+. +.|.+.|.|+|+|..+.. ..|+.+.. +.+..+|.|.+++.+|+|.|
T Consensus 5 ~~~~G~~v~L~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 5 LGKKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEETTSCEEECCCCT--TCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred EEeCCCeEEEEEEec--CCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 688999999999998 578899999999864321 23444332 33456899999999999999
Q ss_pred EEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEE
Q psy2145 124 TCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHF 203 (808)
Q Consensus 124 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L 203 (808)
+|.|.|.. ..+.|.|.. +...+ ...+.+|++++|
T Consensus 83 ~C~~~n~~----~~~~l~V~~-----------------------------------------~~~~~-~~~v~~G~~v~l 116 (363)
T 1wio_A 83 ICEVEDQK----EEVQLLVFG-----------------------------------------LTANS-DTHLLQGQSLTL 116 (363)
T ss_dssp EEEETTEE----EEEEEEEEE-----------------------------------------EEESS-CSSEESBSCEEE
T ss_pred EEEEEECC----CcEEEEEEe-----------------------------------------CCCCC-ceEEecCCCEEE
Confidence 99998863 356666642 11112 235789999999
Q ss_pred EEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccc
Q psy2145 204 ECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQT 283 (808)
Q Consensus 204 ~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~ 283 (808)
.|.+ .+.|.+.|.|+++|..+.. ..+ .|.|.++..+|+|.|+|.|.|..+....++.|.|...+
T Consensus 117 ~C~~--~~~p~~~v~W~~~~~~~~~--------~~~--~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p---- 180 (363)
T 1wio_A 117 TLES--PPGSSPSVQCRSPRGKNIQ--------GGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ---- 180 (363)
T ss_dssp EEEC--CTTCCCCEEEECSSSCEEE--------ESS--EEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCS----
T ss_pred EEEc--CCCCCCeEEEEcCCCcccc--------cce--EEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCC----
Confidence 9999 5788999999998765421 112 89999999999999999999987777777777775422
Q ss_pred cccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC-----CCccEEEEEECCEec
Q psy2145 284 ETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG-----DSKLKVTWLRNGVPI 358 (808)
Q Consensus 284 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g-----~p~~~v~W~~~g~~l 358 (808)
.. +....+.+|+.+.|.|.+ .+ .|.+.|+|+++|..+
T Consensus 181 ---------------------------------~~---~~~~~~~~G~~v~l~C~~--~~~~~~~~P~p~i~W~~~g~~~ 222 (363)
T 1wio_A 181 ---------------------------------KA---SSIVYKKEGEQVEFSFPL--AFTVEKLTGSGELWWQAERASS 222 (363)
T ss_dssp ---------------------------------CS---EEEEEEETBCCEEEECCC--CCCCCSSCEEEEEEEEESSCCC
T ss_pred ---------------------------------CC---CCceEEecCCEEEEEEEE--ecccccCCCceeEEEecCCCCc
Confidence 11 145568899999999988 56 788999999999988
Q ss_pred cC--------CCcEEEEe----------eCcEEEEEEccCCCCCCeEEEEEEEcC--CcceEEEEEEEEEeccccccccc
Q psy2145 359 QA--------SNRVSTMH----------DFGYVALNFKYTYPEDSGTYTCRAVNE--LGEAVTSSTLFVESKASLQLDTQ 418 (808)
Q Consensus 359 ~~--------~~~~~~~~----------~~~~~~L~I~~v~~~d~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~ 418 (808)
.. +.++.+.. .++..+|.|.++..+|+|.|+|.|.|. .|.....+.|.|..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~--------- 293 (363)
T 1wio_A 223 SKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR--------- 293 (363)
T ss_dssp CCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEE---------
T ss_pred cceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEE---------
Confidence 76 44554432 223447999999999999999999999 99888888888762
Q ss_pred chHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCC
Q psy2145 419 NEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDN 498 (808)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (808)
T Consensus 294 -------------------------------------------------------------------------------- 293 (363)
T 1wio_A 294 -------------------------------------------------------------------------------- 293 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE--EEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEE
Q psy2145 499 ATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK--VEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 499 ~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~--v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 576 (808)
..|+.+.|+|.+ .|.|.+. |+|+|+|+.+..+. .|.|.++..+|+|.
T Consensus 294 ------------------v~g~~~~l~C~~--~g~p~p~~~i~W~~~~~~~~~~~-----------~l~i~~v~~~d~G~ 342 (363)
T 1wio_A 294 ------------------ATQLQKNLTCEV--WGPTSPKLMLSLKLENKEAKVSK-----------REKAVWVLNPEAGM 342 (363)
T ss_dssp ------------------ECCCSSSEEEEE--ESSCCTTCCEEEECSSSSCSEEE-----------SSSEEEESSCCSEE
T ss_pred ------------------ecCCCeeEEEEE--ccccCCCccEEEEeCCCceeeee-----------eeeeeeecccccee
Confidence 128889999999 7888888 99999998876321 47889999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEE
Q psy2145 577 YICKATNALGEAVTTASMKIK 597 (808)
Q Consensus 577 Y~C~a~N~~G~~~~s~~l~V~ 597 (808)
|+|.|.|. |....++.|.|.
T Consensus 343 Y~C~a~~~-~~~~~~~~~~V~ 362 (363)
T 1wio_A 343 WQCLLSDS-GQVLLESNIKVL 362 (363)
T ss_dssp EEEEECSS-SSCCEEEEEEEC
T ss_pred EEEEEecC-CeEEEecceEec
Confidence 99999975 667777777764
No 39
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=321.50 Aligned_cols=287 Identities=26% Similarity=0.445 Sum_probs=214.3
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEE--eeCcEEEEEEccCCC-CCCeEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTM--HDFGYVALNFKYTYP-EDSGTYTC 390 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~--~~~~~~~L~I~~v~~-~d~G~Y~C 390 (808)
.+|.|...+.+..+.+|+.+.|.|.+ .|.|.+.|+|+++|..+... ++... .++....|.|.++.. +|+|.|+|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~l~C~~--~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C 81 (304)
T 2yd9_A 5 EPPRFIKEPKDQIGVSGGVASFVCQA--TGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYEC 81 (304)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE--ECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEEE
T ss_pred cCCeeeecCCceEecCCCeEEEEEEE--EEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEEE
Confidence 58999999999999999999999999 78999999999999998654 44433 233446899999998 99999999
Q ss_pred EEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEe
Q psy2145 391 RAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIIT 470 (808)
Q Consensus 391 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 470 (808)
.|.|..|.....+.|.|...+..+
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~p-------------------------------------------------------- 105 (304)
T 2yd9_A 82 VAQNSVGEITVHAKLTVLREDQLP-------------------------------------------------------- 105 (304)
T ss_dssp EEECSSCEECCEEEEEEECGGGCC--------------------------------------------------------
T ss_pred EEECCCCeEEEEEEEEEeccccCC--------------------------------------------------------
Confidence 999999998778889887653211
Q ss_pred cccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCC
Q psy2145 471 DTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDS 550 (808)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~ 550 (808)
...|.|...+... .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+...
T Consensus 106 ------------------------------~~~p~i~~~~~~~-~v~~g~~v~l~C~~--~g~p~~~v~W~k~~~~~~~~ 152 (304)
T 2yd9_A 106 ------------------------------SGFPNIDMGPQLK-VVERTRTATMLCAA--SGNPDPEITWFKDFLPVDPS 152 (304)
T ss_dssp ------------------------------TTCCEEEECCCCE-EEETTSCEEECCEE--ECSSCCEEEEEETTEECCGG
T ss_pred ------------------------------CCCCeeecCCccE-EEeCCCeEEEEEEC--ccCCCCeEEEEECCEECcCC
Confidence 0123444443333 57899999999999 79999999999999998754
Q ss_pred C---CeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEE-EEEEEEecccccccccCcccccccccccCCCCCCC
Q psy2145 551 S---RITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTT-ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMP 626 (808)
Q Consensus 551 ~---~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s-~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~ 626 (808)
. ++... ..+ .|.|.+++.+|+|.|+|.|.|..|..... +.|.|....
T Consensus 153 ~~~~~~~~~-~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~-------------------------- 203 (304)
T 2yd9_A 153 ASNGRIKQL-RSG--ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN-------------------------- 203 (304)
T ss_dssp GGTTSEEEC-TTS--CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC--------------------------
T ss_pred CCcceEEeC-CCe--EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec--------------------------
Confidence 2 33322 223 79999999999999999999999987754 666665321
Q ss_pred CCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCc
Q psy2145 627 QEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADS 706 (808)
Q Consensus 627 ~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~ 706 (808)
.+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|++||..|..+.++. .+...|.|.++ +|+
T Consensus 204 -------~~P~~~~~~~~-~~v~~G~~v~l~C~~--~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~ 267 (304)
T 2yd9_A 204 -------VAPRFSILPMS-HEIMPGGNVNITCVA--VGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDS 267 (304)
T ss_dssp -------EEEEEEECCCC-BCCCTTCCEEEEEEE--EEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSC
T ss_pred -------cCCcEEecCCc-eEEcCCCeEEEEEEE--eeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--ccC
Confidence 13555554443 568999999999999 799999999999999998766532 34557888876 699
Q ss_pred EEEEEEEEeCCcceEEEEEEEEEeCCCcccc
Q psy2145 707 GVYMCKAINRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 707 G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
|.|+|.|+|.+|..+.++.|.|.+++.+...
T Consensus 268 G~Y~C~a~N~~G~~~~~~~l~V~~~~~~~~~ 298 (304)
T 2yd9_A 268 ANYTCVAMSSLGVIEAVAQITVKSLPKAGTK 298 (304)
T ss_dssp EEEEEEEEETTEEEEEEEEEC----------
T ss_pred EEEEEEEEeCCCcEEEEEEEEEecCcccccc
Confidence 9999999999999999999999988776554
No 40
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=327.21 Aligned_cols=299 Identities=18% Similarity=0.253 Sum_probs=228.9
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCC-CccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGD-SKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRA 392 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a 392 (808)
.+|.|..++ ...+.+|+.+.|.|.+ .+. |.+.|.|+|+|..+..+.++.+.. +...|.|.++..+|+|.|+|.|
T Consensus 6 ~~P~~~~~~-~~~v~~G~~v~l~C~~--~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~ 80 (317)
T 2y25_A 6 TGPHFVEYL-SWEVTGECNVLLKCKV--ANIKKETHIVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVIL 80 (317)
T ss_dssp SCCEEEEEE-EEEEETTTEEEEEEEE--ESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEE
T ss_pred CCCcEeeee-eEEECCCCeEEEEEEE--cCCCCCCEEEEEECCeEcCCCCcEEEEC--CeEEEEEccCCcccCeEEEEEE
Confidence 578888655 5889999999999998 565 789999999999998777765542 3358999999999999999999
Q ss_pred EcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecc
Q psy2145 393 VNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDT 472 (808)
Q Consensus 393 ~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 472 (808)
.|..|.....+.|.|...+.+....
T Consensus 81 ~n~~g~~~~~~~l~v~~~~~~~~~~------------------------------------------------------- 105 (317)
T 2y25_A 81 KDDRGKDKSRLKLVDEAFKELMMEV------------------------------------------------------- 105 (317)
T ss_dssp ESSSCEEEEEECCSTHHHHHHHHHH-------------------------------------------------------
T ss_pred ECCCCcEEEEEEEEEecCccccccC-------------------------------------------------------
Confidence 9999987766655554332111000
Q ss_pred cCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCC----------CCCcEEEEEE
Q psy2145 473 QHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG----------DPTLKVEWFR 542 (808)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g----------~P~~~v~W~k 542 (808)
.. ..+.+|+.+.|.|.+ .+ .|.+.+.|+|
T Consensus 106 --------------------------------------~~-~~~~~g~~~~l~c~~--~~~~l~c~~~~~~p~~~i~W~~ 144 (317)
T 2y25_A 106 --------------------------------------CK-KIALSATDLKIQSTA--EGIQLYSFVTYYVEDLKVNWSH 144 (317)
T ss_dssp --------------------------------------HH-HHHTCBCCCEEEECS--SEEEEEEEBSSCCSSCEEEEEE
T ss_pred --------------------------------------Cc-eecccCCCeEEEeec--cccEEEEEeccCCCCcEEEEEE
Confidence 00 023445555555544 33 7999999999
Q ss_pred CCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCC
Q psy2145 543 NEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPA 622 (808)
Q Consensus 543 ~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~ 622 (808)
+|..+..+.++.....++...|.|.+++.+|+|.|+|.|.|..|....++.|.|......... +..+..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~---------~~~~~~~- 214 (317)
T 2y25_A 145 NGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAE---------FQRLKQA- 214 (317)
T ss_dssp SSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHH---------HHHHHHH-
T ss_pred CCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchh---------hcccCCc-
Confidence 999999888888888888788999999999999999999999999988888776532110000 0000000
Q ss_pred CCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEe-CCEEEEEEccC
Q psy2145 623 SPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHD-FGYVTLDITKC 701 (808)
Q Consensus 623 ~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~I~~v 701 (808)
......+|.+...+.....+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+..+ ++.+.|.|.++
T Consensus 215 ------~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~--~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v 286 (317)
T 2y25_A 215 ------AIAEKNRARVLGGLPDVVTIQEGKALNLTCNV--WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGV 286 (317)
T ss_dssp ------HHHTTTSCEEEEBCCSEEEEETTSBBCEEEEE--ECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSC
T ss_pred ------ccCcCCCCcccccCCccEEEEcCCEEEEEEEE--ecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCC
Confidence 00011246777766666779999999999999 7999999999999999999999888776 67889999999
Q ss_pred CCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 702 VPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 702 ~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
..+|+|.|+|.|.|.+|..+.++.|.|..+
T Consensus 287 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 316 (317)
T 2y25_A 287 STADSGKYGLVVKNKYGSETSDFTVSVFIP 316 (317)
T ss_dssp CSTTCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CHHHCEEEEEEEEeCCCeEEEEEEEEEEcC
Confidence 999999999999999999999999999865
No 41
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.5e-36 Score=312.98 Aligned_cols=284 Identities=24% Similarity=0.425 Sum_probs=216.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEE--ecCceEEEEEccCCC-CCcEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTET--NNFGFVALDIMQCLP-EDSGVYT 257 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~--~~~~~~~L~I~~~~~-~D~G~Y~ 257 (808)
..+|.|...+.++.+.+|++++|.|.+ .+.|.+.|.|+|+|..+... ++... .++...+|.|.++.. +|+|.|+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~l~C~~--~g~p~~~i~W~k~g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 4 EEPPRFIKEPKDQIGVSGGVASFVCQA--TGDPKPRVTWNKKGKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCCEEEECCCCEEEETTSCEEEEEEE--ECSSCCEEEEC-------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred ccCCeeeecCCceEecCCCeEEEEEEE--EEeCCCeEEEEECCEECCCC-ceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 568999999999999999999999999 57888999999999998654 34333 233346899999998 9999999
Q ss_pred EEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEE
Q psy2145 258 CRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEA 337 (808)
Q Consensus 258 C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C 337 (808)
|.|.|..|.....+.|.|...+.+ ....|.+...+....+.+|+.+.|.|
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~------------------------------p~~~p~i~~~~~~~~v~~g~~v~l~C 130 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQL------------------------------PSGFPNIDMGPQLKVVERTRTATMLC 130 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGC------------------------------CTTCCEEEECCCCEEEETTSCEEECC
T ss_pred EEEECCCCeEEEEEEEEEeccccC------------------------------CCCCCeeecCCccEEEeCCCeEEEEE
Confidence 999999999888899999764211 11236777777778899999999999
Q ss_pred EEeecCCCccEEEEEECCEeccCCC---cEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecccc
Q psy2145 338 RLIPVGDSKLKVTWLRNGVPIQASN---RVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESKASL 413 (808)
Q Consensus 338 ~~~~~g~p~~~v~W~~~g~~l~~~~---~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~ 413 (808)
.+ .|.|.+.|.|+++|..+..+. ++....+ + .|.|.++..+|+|.|+|.|.|..|...+. +.|.|....
T Consensus 131 ~~--~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~-- 203 (304)
T 2yd9_A 131 AA--SGNPDPEITWFKDFLPVDPSASNGRIKQLRS-G--ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN-- 203 (304)
T ss_dssp EE--ECSSCCEEEEEETTEECCGGGGTTSEEECTT-S--CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC--
T ss_pred EC--ccCCCCeEEEEECCEECcCCCCcceEEeCCC-e--EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec--
Confidence 99 799999999999999887542 3433322 3 79999999999999999999999877654 566664211
Q ss_pred cccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCC
Q psy2145 414 QLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRP 493 (808)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (808)
T Consensus 204 -------------------------------------------------------------------------------- 203 (304)
T 2yd9_A 204 -------------------------------------------------------------------------------- 203 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCC
Q psy2145 494 EVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAED 573 (808)
Q Consensus 494 ~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D 573 (808)
.+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|+|+|+|..+....++. .+...|.|.++ +|
T Consensus 204 --------~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d 266 (304)
T 2yd9_A 204 --------VAPRFSILPMSH-EIMPGGNVNITCVA--VGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KD 266 (304)
T ss_dssp --------EEEEEEECCCCB-CCCTTCCEEEEEEE--EEESCCEEEEEETTEECSCSSSCC----BSEEEEEECSC--CS
T ss_pred --------cCCcEEecCCce-EEcCCCeEEEEEEE--eeeCCCEEEEEECCEECCCccccc----CCcEEEEEccc--cc
Confidence 123444443333 58899999999999 789999999999999998765432 34457888776 69
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
+|.|+|.|.|..|....++.|.|...+.
T Consensus 267 ~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 294 (304)
T 2yd9_A 267 SANYTCVAMSSLGVIEAVAQITVKSLPK 294 (304)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC------
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEecCcc
Confidence 9999999999999999999999987644
No 42
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=309.97 Aligned_cols=276 Identities=20% Similarity=0.432 Sum_probs=215.7
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEE-CCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLR-NGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
+|.+...+....+.+|+.+.|.|.+ .|.|. .+.|++ +|..+..+.++.+..++...+|.|.++..+|+|.|+|.|.
T Consensus 4 ~p~v~~~~~~~~v~~G~~v~l~C~~--~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 4 LLQVTISLSKVELSVGESKFFTCTA--IGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp CCEEEESCSEEEEETTCCEEEEEEE--ESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CceEEEeccceEecCCCcEEEEEEE--eCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence 7788888889999999999999999 67775 899999 8888888888888888778899999999999999999999
Q ss_pred cCCcceE-EEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecc
Q psy2145 394 NELGEAV-TSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDT 472 (808)
Q Consensus 394 n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 472 (808)
|..|... ..+.|.|..++.
T Consensus 81 n~~g~~~~~~~~l~v~~~~~------------------------------------------------------------ 100 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQKLT------------------------------------------------------------ 100 (291)
T ss_dssp CSSSCEEEEEEEEEEECCCB------------------------------------------------------------
T ss_pred cccCceEEEEEEEEecCCcc------------------------------------------------------------
Confidence 9988764 346666654322
Q ss_pred cCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC--C
Q psy2145 473 QHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED--S 550 (808)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~--~ 550 (808)
|...+.+. .+.+|+.+.|.|.+ .+.|.+.+.|++++..+.. .
T Consensus 101 ---------------------------------~~~~~~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~ 144 (291)
T 2wim_A 101 ---------------------------------FREVVSPQ-EFKQGEDAEVVCRV--SSSPAPAVSWLYHNEEVTTISD 144 (291)
T ss_dssp ---------------------------------CCSCCCSE-EEETTSCEEECCCC--BCSSCCEEEEECC----CBCCC
T ss_pred ---------------------------------eEeCCCCh-hhcCCCCEEEEEEE--ccCCCCEEEEEECCccccccCC
Confidence 11112222 47899999999998 7999999999999998864 3
Q ss_pred CCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEE--EEEEEEEEecccccccccCcccccccccccCCCCCCCCC
Q psy2145 551 SRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAV--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQE 628 (808)
Q Consensus 551 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~ 628 (808)
.++....+ + .|.|.++..+|+|.|+|.|.|..+... ..+.|.|..+|.+.
T Consensus 145 ~~~~~~~~-~--~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~------------------------- 196 (291)
T 2wim_A 145 NRFAMLAN-N--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAIS------------------------- 196 (291)
T ss_dssp SSEEECTT-S--CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCB-------------------------
T ss_pred ceEEEccC-C--CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccc-------------------------
Confidence 44444333 2 699999999999999999999875443 44556665543321
Q ss_pred CccccCCCeEEeecCC-CccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcE
Q psy2145 629 PERQYEKPIFTQLLTG-TSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSG 707 (808)
Q Consensus 629 ~~~~~~~P~~~~~~~~-~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G 707 (808)
..... ...+.+|+.+.|.|.+ .|.|.|.|.|++||..+..+.++.+.... ..|.|.++..+|+|
T Consensus 197 -----------~~~~~~~~~~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G 261 (291)
T 2wim_A 197 -----------MPQKSFNATAERGEEMTFSCRA--SGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGG 261 (291)
T ss_dssp -----------CSCSEEECCSSSCCEEEEECBC--CCBSCCEEEEEETTEECCCTTTEEECSTT--CEEEEESCCSTTCE
T ss_pred -----------cCcccccceecCCCeEEEEEEe--ecCCCCeEEEEECCEECcCCccEEEcCCc--cEEEEeeCCcccCE
Confidence 11110 2357899999999999 79999999999999999988887765433 48999999999999
Q ss_pred EEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 708 VYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 708 ~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
.|+|.|.|.+|.+++++.|.|..++
T Consensus 262 ~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 262 PYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEEECCCceeeeEEEEEEEec
Confidence 9999999999999999999998765
No 43
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=4.5e-36 Score=333.35 Aligned_cols=383 Identities=12% Similarity=0.131 Sum_probs=239.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee-----------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT-----------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||+ |..+. ...|+.+..+ .+..+|.
T Consensus 4 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (444)
T 1igt_B 4 LQESGGG-LVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQ 82 (444)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEE
T ss_pred EecCCCe-EEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEE
Confidence 4456677 89999999999999852113578999985 33221 1357777654 3567999
Q ss_pred EcccCcCCCeeEEEEEEecCcce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
|.+++.+|+|.|+|.|.|..+.. ...+.|.|.... ..+|.+..
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~~ 128 (444)
T 1igt_B 83 MSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK----------------------------------TTAPSVYP 128 (444)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC----------------------------------CBCCEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCC----------------------------------CCCCceeE
Confidence 99999999999999999976541 233566664211 23455544
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeCc
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNAL 264 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~ 264 (808)
.+....+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+...........+. ...|.|.++..+| |.|+|.|.|..
T Consensus 129 ~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~ 206 (444)
T 1igt_B 129 LAPVCGDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 206 (444)
T ss_dssp ECCCSSCCCSSCEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETT
T ss_pred ecccccCCCCCcEEEEEEEcc-eeCCCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCC
Confidence 443444689999999999953 23655 999999988642110000011111 1369999999999 99999999998
Q ss_pred eeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee-ccCCCceE-eecCCeEEEEEEEeec
Q psy2145 265 GQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF-TQPMRDIH-VAENQAAHFEARLIPV 342 (808)
Q Consensus 265 g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-v~~G~~~~l~C~~~~~ 342 (808)
|.......+.+......... . ..........+|.+ ..++.... +.+|+.+.|.|.+ .
T Consensus 207 ~~~~~~~~i~~~~~~~~~~~-----------------~--~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~--~ 265 (444)
T 1igt_B 207 SSTKVDKKIEPRGPTIKPCP-----------------P--CKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVV--V 265 (444)
T ss_dssp TTEEEEEECCCCCCSCCCCC-----------------C--CSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEE--E
T ss_pred CCcceEEEeccCCCCcccCC-----------------c--cccCCcccCCCceEEecCCchhheeecCCCcEEEEEE--e
Confidence 87655444433110000000 0 00000001124443 44443333 5889999999999 4
Q ss_pred CC---C-ccEEEEEECCEeccCCCcE--EEEeeC---cEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccc
Q psy2145 343 GD---S-KLKVTWLRNGVPIQASNRV--STMHDF---GYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASL 413 (808)
Q Consensus 343 g~---p-~~~v~W~~~g~~l~~~~~~--~~~~~~---~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 413 (808)
|. | .+.|+|+|+|..+...... ....++ ...+|.|.++..+|+|.|+|.|.|..|.......+.+...
T Consensus 266 g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~--- 342 (444)
T 1igt_B 266 DVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKG--- 342 (444)
T ss_dssp EECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCC---
T ss_pred ecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCC---
Confidence 55 3 4799999999988654321 111111 2347999999999999999999999887633333321000
Q ss_pred cccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCC
Q psy2145 414 QLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRP 493 (808)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (808)
T Consensus 343 -------------------------------------------------------------------------------- 342 (444)
T 1igt_B 343 -------------------------------------------------------------------------------- 342 (444)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCC-CCCc-EEEEEECCEecCCCCC--eEEEeeCcE---EEEEE
Q psy2145 494 EVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG-DPTL-KVEWFRNEKPLEDSSR--ITTKHDFGY---VAMDL 566 (808)
Q Consensus 494 ~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~~-~v~W~k~g~~l~~~~~--~~~~~~~~~---~~L~I 566 (808)
...+|.+.........+..|+ ++|.|.+ .| .|.+ .|+|+|||..+..... .....++.+ ..|.|
T Consensus 343 ------~~~~P~v~~~~~~~~~~~~~~-~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i 413 (444)
T 1igt_B 343 ------SVRAPQVYVLPPPEEEMTKKQ-VTLTCMV--TDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRV 413 (444)
T ss_dssp ------CCBCCEEEEECCCGGGTTSSE-EEEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEE
T ss_pred ------CCCCCEEEEeCCChHHccCCe-EEEEEEE--EeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEE
Confidence 011333332222222345565 9999999 56 5655 8999999998853211 111122221 24777
Q ss_pred CCCCCCCCEEEEEEEEeCC
Q psy2145 567 SHVRAEDEGIYICKATNAL 585 (808)
Q Consensus 567 ~~v~~~D~G~Y~C~a~N~~ 585 (808)
.....+|+|.|+|.|.|..
T Consensus 414 ~~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 414 EKKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp EHHHHHTCCCEEEEEECTT
T ss_pred ChHHhcCCCeEEEEEECCC
Confidence 7777788999999999975
No 44
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=4.1e-36 Score=333.66 Aligned_cols=380 Identities=14% Similarity=0.161 Sum_probs=238.2
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEcc-----------------CCCceEEEec--CceEEEEEc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPIK-----------------SGSRFTETNN--FGFVALDIM 246 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~ 246 (808)
..+..+.+.+|++|+|.|.+.+...+.+.|.|||+ |..+. ...|+.+..+ .+..+|.|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (444)
T 1igt_B 5 QESGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMS 84 (444)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEEC
Confidence 34567789999999999999532113678999985 33210 1246665443 456789999
Q ss_pred cCCCCCcEEEEEEEEeCcee---EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCC
Q psy2145 247 QCLPEDSGVYTCRAVNALGQ---AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMR 323 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~ 323 (808)
+++.+|+|.|+|.|.|..+. ....+.|.|.... ..+|.+.....
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~~P~i~~~~~ 131 (444)
T 1igt_B 85 RLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAK---------------------------------TTAPSVYPLAP 131 (444)
T ss_dssp SCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCC---------------------------------CBCCEEEEECC
T ss_pred CCCHHHCEEEEEEEecCCcccccccCcEEEEecCCC---------------------------------CCCCceeEecc
Confidence 99999999999999997654 2234567775311 12343332222
Q ss_pred ceEeecCCeEEEEEEEeecC-CCcc-EEEEEECCEeccC--CCcEEEEeeCc---EEEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 324 DIHVAENQAAHFEARLIPVG-DSKL-KVTWLRNGVPIQA--SNRVSTMHDFG---YVALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g-~p~~-~v~W~~~g~~l~~--~~~~~~~~~~~---~~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
...+.+|+.+.|.|.+ .| .|.+ .|.|+++|..+.. ..... ..+. ...|.|.++..+| |.|+|.|.|..
T Consensus 132 ~~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~ 206 (444)
T 1igt_B 132 VCGDTTGSSVTLGCLV--KGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPA 206 (444)
T ss_dssp CSSCCCSSCEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECSTTTTT-SCCEEEEEETT
T ss_pred cccCCCCCcEEEEEEE--cceeCCCcEEEEecCCCCCCeEecCccc--cCCcEEEEEEEEEchhhcCC-CeEEEEEEeCC
Confidence 2234789999999998 45 4665 9999999876421 11111 1111 1368999999999 99999999999
Q ss_pred cceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCc
Q psy2145 397 GEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPK 476 (808)
Q Consensus 397 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (808)
|.......+.+....... +. +
T Consensus 207 ~~~~~~~~i~~~~~~~~~------------------------------~~--~--------------------------- 227 (444)
T 1igt_B 207 SSTKVDKKIEPRGPTIKP------------------------------CP--P--------------------------- 227 (444)
T ss_dssp TTEEEEEECCCCCCSCCC------------------------------CC--C---------------------------
T ss_pred CCcceEEEeccCCCCccc------------------------------CC--c---------------------------
Confidence 886544443321100000 00 0
Q ss_pred hhhhhcccccCCCCCCCCcCCCCccCCCee-eecCCCcccccCCCceEEEEEEeeCCC---C-CcEEEEEECCEecCCCC
Q psy2145 477 GLEKIRKLEDTEPHKRPEVDDNATKQRPVF-TKPLQNIDAVEEGKNAHFSCRLIPVGD---P-TLKVEWFRNEKPLEDSS 551 (808)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f-~~~~~~~~~v~~G~~v~l~C~v~~~g~---P-~~~v~W~k~g~~l~~~~ 551 (808)
..+ .......+|.+ +.++.....+.+|+.+.|.|.+ .|. | .+.|+|+|+|..+....
T Consensus 228 -------------~~~---~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C~~--~g~~~~p~~~~v~W~k~~~~~~~~~ 289 (444)
T 1igt_B 228 -------------CKC---PAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVV--VDVSEDDPDVQISWFVNNVEVHTAQ 289 (444)
T ss_dssp -------------CSC---CCSCCCCCCEEEEECCCHHHHHCTTSCCEEEEEE--EEECTTCCCCEEEEEETTEECSSTT
T ss_pred -------------ccc---CCcccCCCceEEecCCchhheeecCCCcEEEEEE--eecccCCCCeEEEEEECCccccCcc
Confidence 000 00001123443 3333322125889999999999 565 3 47999999999886543
Q ss_pred Ce--EEEeeC---cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCC
Q psy2145 552 RI--TTKHDF---GYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMP 626 (808)
Q Consensus 552 ~~--~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~ 626 (808)
.. ....++ ....|.|.++..+|+|.|+|.|.|..|.......+.+..
T Consensus 290 ~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~---------------------------- 341 (444)
T 1igt_B 290 TQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPK---------------------------- 341 (444)
T ss_dssp CBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCC----------------------------
T ss_pred cccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccC----------------------------
Confidence 21 111111 234799999999999999999999998764444332210
Q ss_pred CCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEE--EEeCCE---EEEEEc
Q psy2145 627 QEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHV--QHDFGY---VTLDIT 699 (808)
Q Consensus 627 ~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~--~~~~~~---~~L~I~ 699 (808)
....+|.+.........+..|+ ++|.|.+ .| .|.+ .|.|+|||..+........ ..++.+ +.|.|.
T Consensus 342 ----~~~~~P~v~~~~~~~~~~~~~~-~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~ 414 (444)
T 1igt_B 342 ----GSVRAPQVYVLPPPEEEMTKKQ-VTLTCMV--TDFMPEDIYVEWTNNGKTELNYKNTEPVLDSDGSYFMYSKLRVE 414 (444)
T ss_dssp ----CCCBCCEEEEECCCGGGTTSSE-EEEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEE
T ss_pred ----CCCCCCEEEEeCCChHHccCCe-EEEEEEE--EeeeCCCCEEEEEECCEEccccccccceeCCCCCEEEEEEEEEC
Confidence 0113466655544333455554 9999999 67 5655 9999999999853211111 112222 357777
Q ss_pred cCCCCCcEEEEEEEEeCC
Q psy2145 700 KCVPADSGVYMCKAINRA 717 (808)
Q Consensus 700 ~v~~~D~G~Y~C~A~N~~ 717 (808)
....+|.|.|+|.|.|..
T Consensus 415 ~~~~~d~g~YtC~a~n~~ 432 (444)
T 1igt_B 415 KKNWVERNSYSCSVVHEG 432 (444)
T ss_dssp HHHHHTCCCEEEEEECTT
T ss_pred hHHhcCCCeEEEEEECCC
Confidence 777778999999999985
No 45
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=5.2e-35 Score=305.23 Aligned_cols=276 Identities=19% Similarity=0.307 Sum_probs=212.4
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecCCC-ccEEEEEE-CCEeccCC-CcEEEEe-eCcEEEEEEccCCCCCCeEEEE
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVGDS-KLKVTWLR-NGVPIQAS-NRVSTMH-DFGYVALNFKYTYPEDSGTYTC 390 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p-~~~v~W~~-~g~~l~~~-~~~~~~~-~~~~~~L~I~~v~~~d~G~Y~C 390 (808)
++.+...+....+.+|+.+.|.|.+ .+.| .+.|.|++ +|..+... .++.+.. +.+..+|.|.++..+|+|.|+|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~--~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQV--AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEE--SSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEe--CCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEE
Confidence 5667777888899999999999999 6766 69999999 88887743 4555543 4466789999999999999999
Q ss_pred EEEcCCcce-EEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeE
Q psy2145 391 RAVNELGEA-VTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTII 469 (808)
Q Consensus 391 ~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 469 (808)
.|.|..|.. ...+.|.|..+
T Consensus 80 ~~~n~~g~~~~~~~~l~v~~~----------------------------------------------------------- 100 (291)
T 1qz1_A 80 VVTAEDGTQSEATVNVKIFQK----------------------------------------------------------- 100 (291)
T ss_dssp EEECTTSCEEEEEEEEEEECC-----------------------------------------------------------
T ss_pred EEEcCCCCeeEEEEEEEeecc-----------------------------------------------------------
Confidence 999998643 34466666532
Q ss_pred ecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC
Q psy2145 470 TDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED 549 (808)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~ 549 (808)
|.|...+... .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..
T Consensus 101 ----------------------------------~~~~~~~~~~-~~~~g~~v~l~C~~--~~~p~~~v~W~~~~~~~~~ 143 (291)
T 1qz1_A 101 ----------------------------------LMFKNAPTPQ-EFKEGEDAVIVCDV--VSSLPPTIIWKHKGRDVIL 143 (291)
T ss_dssp ----------------------------------SEEEECCSSE-EEETTSCEEECCEE--ECSSCCEEEEEETTSCSST
T ss_pred ----------------------------------ccccCCCCcc-cccCCCeEEEEEEe--ccCCCCEEEEEECCEEccc
Confidence 2233322232 57899999999999 7899999999999998865
Q ss_pred C--CCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEE--EEEEEEEEecccccccccCcccccccccccCCCCCC
Q psy2145 550 S--SRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAV--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPM 625 (808)
Q Consensus 550 ~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~ 625 (808)
. .++.... ++ .|.|.+++.+|+|.|+|.|.|..+... ..+.|.|...|.+
T Consensus 144 ~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~----------------------- 197 (291)
T 1qz1_A 144 KKDVRFIVLS-NN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTV----------------------- 197 (291)
T ss_dssp TCCTTEEECT-TS--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEE-----------------------
T ss_pred CCCceEEEcc-CC--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcc-----------------------
Confidence 3 3333332 23 699999999999999999999875433 4456666654332
Q ss_pred CCCCccccCCCeEEeecC-CCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC----cEEEEEeCCEEEEEEcc
Q psy2145 626 PQEPERQYEKPIFTQLLT-GTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS----RFHVQHDFGYVTLDITK 700 (808)
Q Consensus 626 ~~~~~~~~~~P~~~~~~~-~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~~~~~~L~I~~ 700 (808)
..... ....+.+|+.+.|.|.+ .|.|.|.|.|++||..+..+. ++.+. .....|.|.+
T Consensus 198 -------------~~~~~~~~~~~~~g~~v~l~C~~--~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~--~~~~~L~i~~ 260 (291)
T 1qz1_A 198 -------------QARQSIVNATANLGQSVTLVCDA--DGFPEPTMSWTKDGEPIENEEEDDEKHIFS--DDSSELTIRN 260 (291)
T ss_dssp -------------EESCSEEEEETTSCCCEEEEEEE--EEESCCEEEEEETTEECCCC--CCSSEEEC--TTSCEEEECS
T ss_pred -------------cccccccccccccCceEEEEEEE--EEeCCCcEEEEECCEECcCCCCCCcceEEc--CCCcEEEEEe
Confidence 22111 12357899999999999 799999999999999998764 44443 3345899999
Q ss_pred CCCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 701 CVPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 701 v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
+..+|+|.|+|.|.|.+|..+.++.|.|..+
T Consensus 261 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~k 291 (291)
T 1qz1_A 261 VDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291 (291)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred cChhcCEEEEEEEEeCCCceEEEEEEEEEcC
Confidence 9999999999999999999999999999753
No 46
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=318.08 Aligned_cols=300 Identities=20% Similarity=0.290 Sum_probs=224.5
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCC-CCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSD-NTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|..++ +..+.+|++++|.|.+. +. |.+.|.|+|+|..+..+.++... .+..+|.|.+++.+|+|.|+|.
T Consensus 5 ~~~P~~~~~~-~~~v~~G~~v~l~C~~~--~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~ 79 (317)
T 2y25_A 5 FTGPHFVEYL-SWEVTGECNVLLKCKVA--NIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVI 79 (317)
T ss_dssp SSCCEEEEEE-EEEEETTTEEEEEEEEE--SCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEE
T ss_pred cCCCcEeeee-eEEECCCCeEEEEEEEc--CCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEE
Confidence 5689998655 58899999999999984 54 78999999999999877766554 3345899999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeE------
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAA------ 333 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~------ 333 (808)
|.|..|.....+.|.|...+ .+...+....+.+|+.+
T Consensus 80 ~~n~~g~~~~~~~l~v~~~~-------------------------------------~~~~~~~~~~~~~g~~~~l~c~~ 122 (317)
T 2y25_A 80 LKDDRGKDKSRLKLVDEAFK-------------------------------------ELMMEVCKKIALSATDLKIQSTA 122 (317)
T ss_dssp EESSSCEEEEEECCSTHHHH-------------------------------------HHHHHHHHHHHTCBCCCEEEECS
T ss_pred EECCCCcEEEEEEEEEecCc-------------------------------------cccccCCceecccCCCeEEEeec
Confidence 99999987766665554321 11111111223344444
Q ss_pred ---EEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy2145 334 ---HFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESK 410 (808)
Q Consensus 334 ---~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 410 (808)
.|.|.+. .+.|.+.+.|+++|..+..+.++....+++...|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 123 ~~~~l~c~~~-~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 201 (317)
T 2y25_A 123 EGIQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAY 201 (317)
T ss_dssp SEEEEEEEBS-SCCSSCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHH
T ss_pred cccEEEEEec-cCCCCcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeec
Confidence 4555441 127899999999999999888888888888888999999999999999999999998887777766432
Q ss_pred ccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCC
Q psy2145 411 ASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPH 490 (808)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (808)
..... .++.+...
T Consensus 202 ~~~~~---------~~~~~~~~---------------------------------------------------------- 214 (317)
T 2y25_A 202 DEAYA---------EFQRLKQA---------------------------------------------------------- 214 (317)
T ss_dssp HHHHH---------HHHHHHHH----------------------------------------------------------
T ss_pred cccch---------hhcccCCc----------------------------------------------------------
Confidence 11100 00000000
Q ss_pred CCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEee-CcEEEEEECCC
Q psy2145 491 KRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHD-FGYVAMDLSHV 569 (808)
Q Consensus 491 ~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v 569 (808)
......+|.+...++....+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+..+.++.+..+ ++...|.|.++
T Consensus 215 ------~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~--~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v 286 (317)
T 2y25_A 215 ------AIAEKNRARVLGGLPDVVTIQEGKALNLTCNV--WGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGV 286 (317)
T ss_dssp ------HHHTTTSCEEEEBCCSEEEEETTSBBCEEEEE--ECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSC
T ss_pred ------ccCcCCCCcccccCCccEEEEcCCEEEEEEEE--ecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCC
Confidence 00011245555555554478999999999999 7999999999999999998888887766 66778999999
Q ss_pred CCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 570 RAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
+.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 287 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 287 STADSGKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp CSTTCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CHHHCEEEEEEEEeCCCeEEEEEEEEEEc
Confidence 99999999999999999999999999975
No 47
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=302.71 Aligned_cols=277 Identities=23% Similarity=0.421 Sum_probs=219.0
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEee-CCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH-NNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
.+|.|...+.++.+.+|+.++|.|.+ .+.|. .+.|++ +|..+..+.++....++...+|.|.+++.+|+|.|+|.|
T Consensus 3 ~~p~v~~~~~~~~v~~G~~v~l~C~~--~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 3 ALLQVTISLSKVELSVGESKFFTCTA--IGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCCEEEESCSEEEEETTCCEEEEEEE--ESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEeccceEecCCCcEEEEEEE--eCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 57899999999999999999999999 46665 899999 888888888888877777779999999999999999999
Q ss_pred EeCceeEE-EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 261 VNALGQAV-TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 261 ~n~~g~~~-~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
.|..|... ..+.|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 80 ~n~~g~~~~~~~~l~v~~-------------------------------------~~~~~~~~~~~~v~~G~~v~l~C~~ 122 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQ-------------------------------------KLTFREVVSPQEFKQGEDAEVVCRV 122 (291)
T ss_dssp ECSSSCEEEEEEEEEEEC-------------------------------------CCBCCSCCCSEEEETTSCEEECCCC
T ss_pred ecccCceEEEEEEEEecC-------------------------------------CcceEeCCCChhhcCCCCEEEEEEE
Confidence 99888763 456666653 4455555667788999999999998
Q ss_pred eecCCCccEEEEEECCEeccC--CCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEE--EEEEEEEecccccc
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQA--SNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVT--SSTLFVESKASLQL 415 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~--~~~l~V~~~~~~~~ 415 (808)
.+.|.+.+.|++++..+.. ..++....++ .|.|.++..+|+|.|+|.|.|..+.... .+.+.|..+|.+.
T Consensus 123 --~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~- 196 (291)
T 2wim_A 123 --SSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAIS- 196 (291)
T ss_dssp --BCSSCCEEEEECC----CBCCCSSEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCB-
T ss_pred --ccCCCCEEEEEECCccccccCCceEEEccCC---CEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccc-
Confidence 7889999999999988764 3455544333 5999999999999999999998865443 3455555433221
Q ss_pred cccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCc
Q psy2145 416 DTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEV 495 (808)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (808)
T Consensus 197 -------------------------------------------------------------------------------- 196 (291)
T 2wim_A 197 -------------------------------------------------------------------------------- 196 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccCCCeeeecCCC-cccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCC
Q psy2145 496 DDNATKQRPVFTKPLQN-IDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDE 574 (808)
Q Consensus 496 ~~~~~~~~P~f~~~~~~-~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~ 574 (808)
.+... ...+.+|+.+.|.|.+ .|.|.+.|.|+|||..+..+.++.+....+ .|.|.++..+|+
T Consensus 197 ------------~~~~~~~~~~~~g~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~ 260 (291)
T 2wim_A 197 ------------MPQKSFNATAERGEEMTFSCRA--SGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDG 260 (291)
T ss_dssp ------------CSCSEEECCSSSCCEEEEECBC--CCBSCCEEEEEETTEECCCTTTEEECSTTC--EEEEESCCSTTC
T ss_pred ------------cCcccccceecCCCeEEEEEEe--ecCCCCeEEEEECCEECcCCccEEEcCCcc--EEEEeeCCcccC
Confidence 11110 1147889999999999 899999999999999999888876654443 799999999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEEecc
Q psy2145 575 GIYICKATNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 575 G~Y~C~a~N~~G~~~~s~~l~V~~~~ 600 (808)
|.|+|.|.|..|..++++.|.|...+
T Consensus 261 G~Y~C~a~N~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 261 GPYVCRATNKAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp EEEEEEEEETTEEEEEEEEEEC----
T ss_pred EEEEEEEEECCCceeeeEEEEEEEec
Confidence 99999999999999999999998753
No 48
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=7.1e-35 Score=307.48 Aligned_cols=298 Identities=18% Similarity=0.245 Sum_probs=217.7
Q ss_pred ceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEE
Q psy2145 324 DIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSS 403 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~ 403 (808)
.+.+.+|+.+.|.|.+. .+.|.+.|.|+|+|.++..+.++.+..+++..+|.|.++..+|+|.|+|.|.|..|... ++
T Consensus 10 ~~~v~eg~~v~l~~~~~-~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~ 87 (312)
T 2y23_A 10 VVNVDDDGVISLNFECD-KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SY 87 (312)
T ss_dssp EEEECTTCCEEEEEECS-SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EE
T ss_pred eEEEecCCeEEEEEEEe-CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EE
Confidence 45678999999999985 57899999999999999988899988888888999999999999999999999988654 45
Q ss_pred EEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcc
Q psy2145 404 TLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRK 483 (808)
Q Consensus 404 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (808)
.|.|.....+. .+..
T Consensus 88 ~l~v~~~~~~~-------------~~~~---------------------------------------------------- 102 (312)
T 2y23_A 88 LIDEEELKRLL-------------ALSH---------------------------------------------------- 102 (312)
T ss_dssp EECHHHHHHHH-------------HHHH----------------------------------------------------
T ss_pred EEEEeeeeeee-------------cccc----------------------------------------------------
Confidence 55543211000 0000
Q ss_pred cccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeC-CCCCcEEEEEECCEecCCCCCeEEEee--Cc
Q psy2145 484 LEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPV-GDPTLKVEWFRNEKPLEDSSRITTKHD--FG 560 (808)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~-g~P~~~v~W~k~g~~l~~~~~~~~~~~--~~ 560 (808)
...+|.+.........+.+|+.+.|.|.+ . +.|.+.+.|+|+|..+..+.++.+..+ .+
T Consensus 103 ----------------~~~~p~~~~~~~~~~~v~~G~~v~l~C~~--~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~ 164 (312)
T 2y23_A 103 ----------------EHKFPTVPVKSELAVEILEKGQVRFWMQA--EKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTG 164 (312)
T ss_dssp ----------------HHHSCBCCEEEEEEEEECSSSCEEEEEEE--SCCCSSCEEEEEETTEEECSSSSCEEEEETTTT
T ss_pred ----------------cCCCCccccccCCceEEeeCCCEEEEEEE--EeCCCCCEEEEEECCEECeeCCcEEEEEccCCC
Confidence 00011111111111257899999999999 6 899999999999999998888777654 56
Q ss_pred EEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEe
Q psy2145 561 YVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQ 640 (808)
Q Consensus 561 ~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~ 640 (808)
..+|.|.+++.+|+|.|+|.|.|..+... ..+.+......... ..++ ..+. +.....+|.|..
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~-~~~~-------------~~~~~~~p~~~~ 227 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATNH--STVVLVGDVFKKLQ-KEAE-FQRQ-------------EWIRKQGPHFVE 227 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEEE--EEEEECTHHHHHHH-HHHH-HHHH-------------HHHHHHSSEEEE
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceEE--EEEEEcchhhhhhc-cccc-cccc-------------chhhccCCceee
Confidence 67899999999999999999987655443 33433211100000 0000 0000 000012477775
Q ss_pred ecCCCccccCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 641 LLTGTSEIMEGQSAHYDCRVVPVGDPTM-RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 641 ~~~~~~~v~~G~~v~l~C~v~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.+. ..+.+|+.+.|.|.+ .|.|.| .|.|+|||..+..+.++.+. ++..+|.|.++..+|+|.|+|.|.|.+|.
T Consensus 228 ~~~--~~v~~G~~~~l~C~~--~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~ 301 (312)
T 2y23_A 228 YLS--WEVTGECNVLLKCKV--ANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGK 301 (312)
T ss_dssp EEE--EEEETTTEEEEEEEE--ESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCC
T ss_pred cce--EEEeCCCEEEEEEEE--cCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCc
Confidence 554 568899999999999 799988 99999999999977777765 45679999999999999999999999999
Q ss_pred eEEEEEEEEE
Q psy2145 720 AVSSTSLKVK 729 (808)
Q Consensus 720 ~~~s~~l~V~ 729 (808)
.+.++.|.|+
T Consensus 302 ~~~~~~l~i~ 311 (312)
T 2y23_A 302 DKSRLKLVDE 311 (312)
T ss_dssp EEEEEEECSC
T ss_pred eeeeeEEEec
Confidence 9999999875
No 49
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=4.3e-35 Score=326.63 Aligned_cols=380 Identities=15% Similarity=0.198 Sum_probs=235.0
Q ss_pred ecCceeecCCCeEEEEEEEeecCCC--CeEEEEeeC--CEE---c--------------cCCCceEEEec--CceEEEEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHN--NVP---I--------------KSGSRFTETNN--FGFVALDI 245 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~I 245 (808)
.+..+.+.+|++++|.|.+. +.+ .+.|.|||+ |.. + ....|+.+..+ .+..+|.|
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (457)
T 1hzh_H 6 QSGAEVKKPGASVKVSCQAS--GYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMEL 83 (457)
T ss_dssp ECCCEEECTTCCEEECEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred cCCceEEcCCCCEEEEEEec--CccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEE
Confidence 45567899999999999994 544 678999984 321 1 01346665543 45678999
Q ss_pred ccCCCCCcEEEEEEEEeCce------------eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccC
Q psy2145 246 MQCLPEDSGVYTCRAVNALG------------QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVS 313 (808)
Q Consensus 246 ~~~~~~D~G~Y~C~a~n~~g------------~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 313 (808)
.+++.+|+|.|+|.|.|..| .....+.|.|...+ .
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------~ 130 (457)
T 1hzh_H 84 RSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS---------------------------------T 130 (457)
T ss_dssp CSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC---------------------------------C
T ss_pred CCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC---------------------------------C
Confidence 99999999999999999765 22244567775311 1
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCC-Cc-cEEEEEECCEeccCCCcEEEEeeCc----EEEEEEccCCCCCCeE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGD-SK-LKVTWLRNGVPIQASNRVSTMHDFG----YVALNFKYTYPEDSGT 387 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~-~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~d~G~ 387 (808)
.+|.+........+.+|+.+.|.|.+ .|. |. +.|.|+++|..+...........++ ...|.|.++..+| |.
T Consensus 131 ~~P~i~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~ 207 (457)
T 1hzh_H 131 KGPSVFPLAPSSKSTSGGTAALGCLV--KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QT 207 (457)
T ss_dssp BCCEEEEECCCSCCCTTCCEEEEEEE--ESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SC
T ss_pred CCCeEEecCccccccCCCcEEEEEEE--eEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ce
Confidence 24444333333446799999999999 455 64 8999999997653211111111222 2369999999999 99
Q ss_pred EEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCce
Q psy2145 388 YTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGT 467 (808)
Q Consensus 388 Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 467 (808)
|+|.|.|..+.......+.+...+...
T Consensus 208 Y~C~a~n~~~~~~~~~~v~~~~~~~~~----------------------------------------------------- 234 (457)
T 1hzh_H 208 YICNVNHKPSNTKVDKKAEPKSCDKTH----------------------------------------------------- 234 (457)
T ss_dssp CEEEEEEGGGTEEEEEECCCCCSCSSC-----------------------------------------------------
T ss_pred EEEEEEeCCCCcceeEEecccCCCccc-----------------------------------------------------
Confidence 999999988776544444332211000
Q ss_pred eEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCee-eecCCCcccccCCCceEEEEEEeeCCCCCc----EEEEEE
Q psy2145 468 IITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVF-TKPLQNIDAVEEGKNAHFSCRLIPVGDPTL----KVEWFR 542 (808)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f-~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~----~v~W~k 542 (808)
.+..........+|.+ +.++.....+.+|+.+.|.|.+ .|.|++ .|+|+|
T Consensus 235 -----------------------~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~--~g~~p~p~~~~i~W~k 289 (457)
T 1hzh_H 235 -----------------------TCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVV--VDVSHEDPEVKFNWYV 289 (457)
T ss_dssp -----------------------SCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEE--ECCCTTCCCCEEEEEE
T ss_pred -----------------------ccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEE--EcccCCCCceEEEEEe
Confidence 0000000001123333 4333322236789999999999 576543 999999
Q ss_pred CCEecCCCCCe-EEEeeCcEEE-EEECCCCCCC---CEEEEEEEEeCCeeEEEEEEEEEEecccccccccCccccccccc
Q psy2145 543 NEKPLEDSSRI-TTKHDFGYVA-MDLSHVRAED---EGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQE 617 (808)
Q Consensus 543 ~g~~l~~~~~~-~~~~~~~~~~-L~I~~v~~~D---~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~ 617 (808)
+|..+...... .....++... .....+...| +|.|+|.|.|..+....+..+.+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~------------------- 350 (457)
T 1hzh_H 290 DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK------------------- 350 (457)
T ss_dssp TTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCC-------------------
T ss_pred CCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEccc-------------------
Confidence 99988643221 1122223211 1111234455 9999999999866554443332210
Q ss_pred ccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCC--eEEEEEECCEEccCCCcEEEE--EeCCE
Q psy2145 618 LEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPT--MRFEWFVNGVELKMGSRFHVQ--HDFGY 693 (808)
Q Consensus 618 l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~--p~i~W~~~g~~l~~~~~~~~~--~~~~~ 693 (808)
....+|.+.........+..|+ +.|.|.+ .|.|+ +.|.|+|||.+|.......+. .++.+
T Consensus 351 -------------~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~ 414 (457)
T 1hzh_H 351 -------------GQPREPQVYTLPPSRDELTKNQ-VSLTCLV--KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSF 414 (457)
T ss_dssp -------------CCCBCCEEEEECCCGGGGGSSE-EEEEEEE--EEEBSSCCEEEEEETTEECCCEEECCCEECTTSCE
T ss_pred -------------CCCCCCeEEEECCCccccCCCc-EEEEEEE--EeEECCCCEEEEEECCEECcceeecCceeCCCCCE
Confidence 0113466665554444466666 9999999 67544 499999999998643222221 12222
Q ss_pred ---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 694 ---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 694 ---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+.|.|.....+|+|.|+|.|.|..-.
T Consensus 415 ~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 443 (457)
T 1hzh_H 415 FLYSKLTVDKSRWQQGNVFSCSVMHEALH 443 (457)
T ss_dssp EEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEEEEChHHccCCCeEEEEEEECCCC
Confidence 35666666667899999999998643
No 50
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=100.00 E-value=4.8e-34 Score=297.85 Aligned_cols=275 Identities=19% Similarity=0.333 Sum_probs=215.1
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEee-CCEEccC-CCceEEEe-cCceEEEEEccCCCCCcEEEEE
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFH-NNVPIKS-GSRFTETN-NFGFVALDIMQCLPEDSGVYTC 258 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~-~g~~l~~-~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C 258 (808)
||.|...|.+..+.+|++++|.|.+ .+.| .+.|.|+| ||..+.. ..++.... +.+..+|.|.+++.+|+|.|+|
T Consensus 2 ~~~v~~~p~~~~v~~G~~v~l~C~~--~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (291)
T 1qz1_A 2 VLQVDIVPSQGEISVGESKFFLCQV--AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (291)
T ss_dssp CCCEEEESSSEEEETTCCEEEEEEE--SSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CcceEecCCCceEeCCCeEEEEEEe--CCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEE
Confidence 6788999999999999999999999 4655 68999999 8888764 34454432 3456689999999999999999
Q ss_pred EEEeCcee-EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEE
Q psy2145 259 RAVNALGQ-AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEA 337 (808)
Q Consensus 259 ~a~n~~g~-~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C 337 (808)
.|.|..|. ....+.|.|.. +|.+...+....+.+|+.+.|.|
T Consensus 80 ~~~n~~g~~~~~~~~l~v~~-------------------------------------~~~~~~~~~~~~~~~g~~v~l~C 122 (291)
T 1qz1_A 80 VVTAEDGTQSEATVNVKIFQ-------------------------------------KLMFKNAPTPQEFKEGEDAVIVC 122 (291)
T ss_dssp EEECTTSCEEEEEEEEEEEC-------------------------------------CSEEEECCSSEEEETTSCEEECC
T ss_pred EEEcCCCCeeEEEEEEEeec-------------------------------------cccccCCCCcccccCCCeEEEEE
Confidence 99998864 34566666653 56666667778899999999999
Q ss_pred EEeecCCCccEEEEEECCEeccCC--CcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE--EEEEEEEEecccc
Q psy2145 338 RLIPVGDSKLKVTWLRNGVPIQAS--NRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV--TSSTLFVESKASL 413 (808)
Q Consensus 338 ~~~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~--~~~~l~V~~~~~~ 413 (808)
.+ .|.|.+.+.|+++|..+... .++....+ + .|.|.++..+|+|.|+|.|.|..+... ..+.|.|..+|.+
T Consensus 123 ~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~ 197 (291)
T 1qz1_A 123 DV--VSSLPPTIIWKHKGRDVILKKDVRFIVLSN-N--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTV 197 (291)
T ss_dssp EE--ECSSCCEEEEEETTSCSSTTCCTTEEECTT-S--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEE
T ss_pred Ee--ccCCCCEEEEEECCEEcccCCCceEEEccC-C--cEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcc
Confidence 99 78899999999999887643 34443333 3 699999999999999999999775443 3455666544322
Q ss_pred cccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCC
Q psy2145 414 QLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRP 493 (808)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (808)
.
T Consensus 198 ~------------------------------------------------------------------------------- 198 (291)
T 1qz1_A 198 Q------------------------------------------------------------------------------- 198 (291)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 1
Q ss_pred CcCCCCccCCCeeeecCC-CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC----CeEEEeeCcEEEEEECC
Q psy2145 494 EVDDNATKQRPVFTKPLQ-NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS----RITTKHDFGYVAMDLSH 568 (808)
Q Consensus 494 ~~~~~~~~~~P~f~~~~~-~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~----~~~~~~~~~~~~L~I~~ 568 (808)
.... ....+.+|+.+.|.|.+ .|.|.|.+.|+|+|..+..+. ++....++ ..|.|.+
T Consensus 199 --------------~~~~~~~~~~~~g~~v~l~C~~--~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~--~~L~i~~ 260 (291)
T 1qz1_A 199 --------------ARQSIVNATANLGQSVTLVCDA--DGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS--SELTIRN 260 (291)
T ss_dssp --------------ESCSEEEEETTSCCCEEEEEEE--EEESCCEEEEEETTEECCCC--CCSSEEECTTS--CEEEECS
T ss_pred --------------ccccccccccccCceEEEEEEE--EEeCCCcEEEEECCEECcCCCCCCcceEEcCCC--cEEEEEe
Confidence 1000 01147889999999999 789999999999999998764 44443333 3799999
Q ss_pred CCCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 569 VRAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
+..+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 261 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 261 VDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 999999999999999999999999999874
No 51
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=100.00 E-value=4.8e-35 Score=326.27 Aligned_cols=381 Identities=13% Similarity=0.192 Sum_probs=234.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeC--CE---Eee--------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKN--GR---PVT--------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~--g~---~l~--------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++++|.|.+.+ .+ .+.|.|||+ |. .+. ...|+.+..+ .+..+
T Consensus 4 ~~~~~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 80 (457)
T 1hzh_H 4 LVQSGAE-VKKPGASVKVSCQASG--YRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAY 80 (457)
T ss_dssp EEECCCE-EECTTCCEEECEEEES--SCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEE
T ss_pred EecCCce-EEcCCCCEEEEEEecC--ccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEE
Confidence 3456667 8999999999999984 44 678999984 32 121 1357777654 46679
Q ss_pred EEEcccCcCCCeeEEEEEEecCc------------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccc
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVG------------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIE 177 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (808)
|.|.+++.+|+|.|+|.|.|..| .....+.|.|....
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------- 129 (457)
T 1hzh_H 81 MELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS------------------------------- 129 (457)
T ss_dssp EEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC-------------------------------
T ss_pred EEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCC-------------------------------
Confidence 99999999999999999999865 12344567665311
Q ss_pred cccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEecCc----eEEEEEccCCCCC
Q psy2145 178 ETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETNNFG----FVALDIMQCLPED 252 (808)
Q Consensus 178 ~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~D 252 (808)
..+|.+...+....+.+|+.++|.|.+.+ ..|. +.|.|+|+|..+...........++ ...|.|.++..+|
T Consensus 130 ---~~~P~i~~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 205 (457)
T 1hzh_H 130 ---TKGPSVFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT 205 (457)
T ss_dssp ---CBCCEEEEECCCSCCCTTCCEEEEEEEES-BBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT
T ss_pred ---CCCCeEEecCccccccCCCcEEEEEEEeE-EeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC
Confidence 23566655555556789999999999952 2354 8999999997653211111112222 1369999999999
Q ss_pred cEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee-ccCCCceE-eecC
Q psy2145 253 SGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF-TQPMRDIH-VAEN 330 (808)
Q Consensus 253 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~-~~~~~~~~-v~~G 330 (808)
|.|+|.|.|..+.......+.+...+..+. ...........+|.+ ..++.... +.+|
T Consensus 206 -G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~--------------------~~~~~~~~~~~~p~v~~~~p~~~~~~~~G 264 (457)
T 1hzh_H 206 -QTYICNVNHKPSNTKVDKKAEPKSCDKTHT--------------------CPPCPAPELLGGPSVFLFPPKPKDTLMIS 264 (457)
T ss_dssp -SCCEEEEEEGGGTEEEEEECCCCCSCSSCS--------------------CCSCCCCCCSSSCEEEEECCCHHHHHCTT
T ss_pred -ceEEEEEEeCCCCcceeEEecccCCCcccc--------------------cCCCCCccccCCceEEeECcCchhhcccC
Confidence 999999999877665554444332110000 000000001123443 44443332 6789
Q ss_pred CeEEEEEEEeecCCCc----cEEEEEECCEeccCCCcE-EEEeeCcEEE-EEEccCCCCC---CeEEEEEEEcCCcceEE
Q psy2145 331 QAAHFEARLIPVGDSK----LKVTWLRNGVPIQASNRV-STMHDFGYVA-LNFKYTYPED---SGTYTCRAVNELGEAVT 401 (808)
Q Consensus 331 ~~~~l~C~~~~~g~p~----~~v~W~~~g~~l~~~~~~-~~~~~~~~~~-L~I~~v~~~d---~G~Y~C~a~n~~g~~~~ 401 (808)
+.+.|.|.+ .|.|+ +.|+|+|+|.++...... .....++... .....+...| +|.|+|.|.|..+....
T Consensus 265 ~~v~L~C~~--~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~ 342 (457)
T 1hzh_H 265 RTPEVTCVV--VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPI 342 (457)
T ss_dssp SCCCEEEEE--ECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCE
T ss_pred CceEEEEEE--EcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcc
Confidence 999999999 57654 399999999988654321 1222223211 1112234455 99999999987665433
Q ss_pred EEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhh
Q psy2145 402 SSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKI 481 (808)
Q Consensus 402 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (808)
...+.+..
T Consensus 343 ~~~v~~~~------------------------------------------------------------------------ 350 (457)
T 1hzh_H 343 EKTISKAK------------------------------------------------------------------------ 350 (457)
T ss_dssp EEEECCCC------------------------------------------------------------------------
T ss_pred eEEEEccc------------------------------------------------------------------------
Confidence 32222100
Q ss_pred cccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC--cEEEEEECCEecCCCCC--eEEEe
Q psy2145 482 RKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT--LKVEWFRNEKPLEDSSR--ITTKH 557 (808)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~--~~v~W~k~g~~l~~~~~--~~~~~ 557 (808)
....+|.+.........+..|+ +.|.|.+ .|.|+ +.|+|+|||..|..... +....
T Consensus 351 -----------------~~~~~P~v~~~~~~~~~~~~~~-~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 410 (457)
T 1hzh_H 351 -----------------GQPREPQVYTLPPSRDELTKNQ-VSLTCLV--KGFYPSDIAVEWESNGQPENNYKTTPPVLDS 410 (457)
T ss_dssp -----------------CCCBCCEEEEECCCGGGGGSSE-EEEEEEE--EEEBSSCCEEEEEETTEECCCEEECCCEECT
T ss_pred -----------------CCCCCCeEEEECCCccccCCCc-EEEEEEE--EeEECCCCEEEEEECCEECcceeecCceeCC
Confidence 0011333333222222355666 9999999 56533 48999999999864321 11112
Q ss_pred eCcE---EEEEECCCCCCCCEEEEEEEEeCCe
Q psy2145 558 DFGY---VAMDLSHVRAEDEGIYICKATNALG 586 (808)
Q Consensus 558 ~~~~---~~L~I~~v~~~D~G~Y~C~a~N~~G 586 (808)
++.+ ..|.|.....+|+|.|+|.|.|...
T Consensus 411 ~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 442 (457)
T 1hzh_H 411 DGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 442 (457)
T ss_dssp TSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred CCCEEEEEEEEEChHHccCCCeEEEEEEECCC
Confidence 2221 2466776666889999999999754
No 52
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=302.38 Aligned_cols=299 Identities=16% Similarity=0.227 Sum_probs=218.0
Q ss_pred CCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEE
Q psy2145 57 KSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEV 136 (808)
Q Consensus 57 ~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 136 (808)
..+ .+.+|+.+.|.|... .+.|.+.|.|+|+|..+..+.|+.+..+++..+|.|.+++.+|+|.|+|.|.|..|...
T Consensus 9 ~~~-~v~eg~~v~l~~~~~-~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~- 85 (312)
T 2y23_A 9 VVV-NVDDDGVISLNFECD-KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS- 85 (312)
T ss_dssp CEE-EECTTCCEEEEEECS-SCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-
T ss_pred eeE-EEecCCeEEEEEEEe-CCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-
Confidence 344 789999999999998 37899999999999999989999998888888999999999999999999999888554
Q ss_pred EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC-ceeecCCCeEEEEEEEeecCCCCe
Q psy2145 137 QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK-NCEIKEGQRAHFECRLIPVSDNTM 215 (808)
Q Consensus 137 ~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~~~v~~G~~v~L~C~~~~~~~p~~ 215 (808)
+..|.|.....+.. +. ....+|.+...+. ...+.+|+.+.|.|.+. .+.|.+
T Consensus 86 s~~l~v~~~~~~~~-------------------------~~-~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~~~p~~ 138 (312)
T 2y23_A 86 SYLIDEEELKRLLA-------------------------LS-HEHKFPTVPVKSELAVEILEKGQVRFWMQAE-KLSGNA 138 (312)
T ss_dssp EEEECHHHHHHHHH-------------------------HH-HHHHSCBCCEEEEEEEEECSSSCEEEEEEES-CCCSSC
T ss_pred EEEEEEeeeeeeec-------------------------cc-ccCCCCccccccCCceEEeeCCCEEEEEEEE-eCCCCC
Confidence 55555431000000 00 0011444444433 78899999999999993 278899
Q ss_pred EEEEeeCCEEccCCCceEEEec--CceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhh
Q psy2145 216 KVEWFHNNVPIKSGSRFTETNN--FGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSR 293 (808)
Q Consensus 216 ~v~W~~~g~~l~~~~~~~~~~~--~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~ 293 (808)
.+.|+++|..+..+.++.+..+ .+..+|.|.+++.+|+|.|+|.|.|..+.... .+.+.......
T Consensus 139 ~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~~~~~~~~~----------- 205 (312)
T 2y23_A 139 KVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHS--TVVLVGDVFKK----------- 205 (312)
T ss_dssp EEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEE--EEEECTHHHHH-----------
T ss_pred EEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEE--EEEEcchhhhh-----------
Confidence 9999999999988887776643 56778999999999999999999875444333 33332110000
Q ss_pred hhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCcc-EEEEEECCEeccCCCcEEEEeeCcE
Q psy2145 294 LQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKL-KVTWLRNGVPIQASNRVSTMHDFGY 372 (808)
Q Consensus 294 ~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~ 372 (808)
.+......+. ......+|.|..++. ..+.+|+.+.|.|.+ .|.|.+ .|.|+++|..+..+.++.+. ++.
T Consensus 206 --~~~~~~~~~~---~~~~~~~p~~~~~~~-~~v~~G~~~~l~C~~--~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~ 275 (312)
T 2y23_A 206 --LQKEAEFQRQ---EWIRKQGPHFVEYLS-WEVTGECNVLLKCKV--ANIKKETHIVWYKDEREISVDEKHDFK--DGI 275 (312)
T ss_dssp --HHHHHHHHHH---HHHHHHSSEEEEEEE-EEEETTTEEEEEEEE--ESCCSSCEEEEEETTEEEEEECCC------CE
T ss_pred --hccccccccc---chhhccCCceeecce-EEEeCCCEEEEEEEE--cCCCCCCEEEEeeCCEECCCCCcEEEE--CCE
Confidence 0000000000 000112466654443 678899999999999 788887 99999999999866666554 345
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 373 VALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 373 ~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
..|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 276 ~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~i~ 311 (312)
T 2y23_A 276 CTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311 (312)
T ss_dssp EEEEECSCSGGGCEEEEEEEESTTCCEEEEEEECSC
T ss_pred EEEEECcCCHHHCEEEEEEEEcCCCceeeeeEEEec
Confidence 689999999999999999999999999988888764
No 53
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=4e-33 Score=312.18 Aligned_cols=383 Identities=12% Similarity=0.119 Sum_probs=236.2
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEE---ee--------------ccCcEEEEee--CCeEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRP---VT--------------IGHRFRPIHD--FGYVAL 110 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~---l~--------------~~~r~~~~~~--~~~~~L 110 (808)
.+..|..+ .+.+|++++|.|.+.+...+...|.|||+ |.. +. ...|+.+..+ .+.++|
T Consensus 4 ~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 82 (475)
T 1iga_A 4 LLEQSGAE-VKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYM 82 (475)
T ss_pred eeccCCcE-EEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEE
Confidence 45567777 89999999999999852223578999995 321 11 1356766554 356789
Q ss_pred EEcccCcCCCeeEEEEEEecCcc------eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC
Q psy2145 111 DIIDTIPEDSGTYTCRAVNLVGF------AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP 184 (808)
Q Consensus 111 ~I~~~~~~D~G~Y~C~a~n~~g~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (808)
.|.+++.+|+|.|.|.+.|..|. ....+.|.|.... ..+|
T Consensus 83 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P 128 (475)
T 1iga_A 83 GLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS----------------------------------PTSP 128 (475)
T ss_pred EECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC----------------------------------CcCC
Confidence 99999999999999999997652 2234566665211 2345
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCCC--eEEEEeeCCEEccCCCceEEE-ecCce----EEEEEccCCCCCcEEEE
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDNT--MKVEWFHNNVPIKSGSRFTET-NNFGF----VALDIMQCLPEDSGVYT 257 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~~~g~~l~~~~~~~~~-~~~~~----~~L~I~~~~~~D~G~Y~ 257 (808)
.+..... ..+.+|+.++|.|.+.+ ..|. +.|.|++++..+......... ..++. ..|.|..+..+|+|.|+
T Consensus 129 ~i~~~~~-~~~~~g~~v~L~C~~~g-~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~ 206 (475)
T 1iga_A 129 KVFPLSL-CSTQPDGNVVIACLVQG-FFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVT 206 (475)
T ss_pred eEEecCc-cccCCCCeEEEEEEEee-ecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEE
Confidence 4443322 22368999999999953 2354 499999988643211000011 11121 25889999999999999
Q ss_pred EEEEeCceeEEEEEEEE--EeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee-ccCCCceEeecCCeEE
Q psy2145 258 CRAVNALGQAVTSGNLL--VHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF-TQPMRDIHVAENQAAH 334 (808)
Q Consensus 258 C~a~n~~g~~~~~~~l~--V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~G~~~~ 334 (808)
|.|.|..|. .....+. |...+.+. + ........... .+|.+ ..++....+.+|+.+.
T Consensus 207 C~a~n~~~~-~~~~~v~l~V~~~~~~~-~-----------------~~~~~~~~~~~-~~p~v~~~~p~~~~~~~G~~v~ 266 (475)
T 1iga_A 207 CHVKHYTNP-SQDVTVPCPVPSTPPTP-S-----------------PSTPPTPSPSC-CHPRLSLHRPALEDLLLGSEAN 266 (475)
T ss_pred EEEEECCCC-ceeeeEecccccCcccc-c-----------------ccccccCCCCC-CCcEEEEcCCChHHhccCCceE
Confidence 999998763 2233333 31110000 0 00000000000 23433 4444444468999999
Q ss_pred EEEEEeecCCCc---cEEEEEECCEeccCCCcE-EEEe-eC---cEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEE
Q psy2145 335 FEARLIPVGDSK---LKVTWLRNGVPIQASNRV-STMH-DF---GYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLF 406 (808)
Q Consensus 335 l~C~~~~~g~p~---~~v~W~~~g~~l~~~~~~-~~~~-~~---~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~ 406 (808)
|.|.+ .|.++ +.|.| ++..+...... .... ++ ...+|.|.++..+|+|.|+|.|.|..|.......|.
T Consensus 267 L~C~~--~g~~p~~~~~i~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~ 342 (475)
T 1iga_A 267 LTCTL--TGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLS 342 (475)
T ss_pred EEEEE--EcccCCCceEEEE--CCCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEee
Confidence 99999 56543 69999 55444322111 1111 11 234799999999999999999999988764444443
Q ss_pred EEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhccccc
Q psy2145 407 VESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLED 486 (808)
Q Consensus 407 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (808)
+..
T Consensus 343 ~~~----------------------------------------------------------------------------- 345 (475)
T 1iga_A 343 KSG----------------------------------------------------------------------------- 345 (475)
T ss_pred cCC-----------------------------------------------------------------------------
Confidence 210
Q ss_pred CCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCC-C-CcEEEEEECCEecCCCCCeE---EEe---e
Q psy2145 487 TEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD-P-TLKVEWFRNEKPLEDSSRIT---TKH---D 558 (808)
Q Consensus 487 ~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~-P-~~~v~W~k~g~~l~~~~~~~---~~~---~ 558 (808)
...+|.+.........+.+|+.+.|.|.+ .|. | .+.|+|+|||+.|..+.... ... .
T Consensus 346 -------------~~~~P~v~~~~~~~~~v~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~ 410 (475)
T 1iga_A 346 -------------NTFRPEVHLLPPPSEELALNELVTLTCLA--RGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQG 410 (475)
T ss_pred -------------CCCCCeEEEECCChHHhccCCceEEEEEE--eeeECCCCEEEEEECCEECCCCceeecccccccCCC
Confidence 00123332222222236789999999999 665 3 35999999999987653111 111 1
Q ss_pred Cc----EEEEEECCCCCCCCEEEEEEEEeCCee
Q psy2145 559 FG----YVAMDLSHVRAEDEGIYICKATNALGE 587 (808)
Q Consensus 559 ~~----~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 587 (808)
+| ...|.|.....+|.|.|+|.|.|....
T Consensus 411 ~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 411 TTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred CCcEEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 22 135888888889999999999998654
No 54
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=100.00 E-value=4.1e-33 Score=312.09 Aligned_cols=380 Identities=15% Similarity=0.140 Sum_probs=235.7
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEcc-----------------CCCceEEEec--CceEEEEEc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPIK-----------------SGSRFTETNN--FGFVALDIM 246 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~ 246 (808)
..+..+.+.+|++|+|.|.+.+...+...+.|||+ |..+. ...|+.+..+ .+..+|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 85 (475)
T 1iga_A 6 EQSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLS 85 (475)
T ss_pred ccCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEEC
Confidence 35667889999999999999422123678999995 32110 1245555443 355689999
Q ss_pred cCCCCCcEEEEEEEEeCcee------EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeecc
Q psy2145 247 QCLPEDSGVYTCRAVNALGQ------AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQ 320 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g~------~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~ 320 (808)
+++.+|+|.|.|.+.|..|. ....+.|.|.... ..+|.+..
T Consensus 86 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~~P~i~~ 132 (475)
T 1iga_A 86 SLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSAS---------------------------------PTSPKVFP 132 (475)
T ss_pred CCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCC---------------------------------CcCCeEEe
Confidence 99999999999999997652 2234577775311 12343332
Q ss_pred CCCceEeecCCeEEEEEEEeecCC-Cc-c-EEEEEECCEeccCCCcEEEE--eeCc---EEEEEEccCCCCCCeEEEEEE
Q psy2145 321 PMRDIHVAENQAAHFEARLIPVGD-SK-L-KVTWLRNGVPIQASNRVSTM--HDFG---YVALNFKYTYPEDSGTYTCRA 392 (808)
Q Consensus 321 ~~~~~~v~~G~~~~l~C~~~~~g~-p~-~-~v~W~~~g~~l~~~~~~~~~--~~~~---~~~L~I~~v~~~d~G~Y~C~a 392 (808)
.. ...+.+|+.+.|.|.+ .|. |. + .|.|+++|............ .++. ...|.|..+..+|+|.|+|.|
T Consensus 133 ~~-~~~~~~g~~v~L~C~~--~g~~P~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a 209 (475)
T 1iga_A 133 LS-LCSTQPDGNVVIACLV--QGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHV 209 (475)
T ss_pred cC-ccccCCCCeEEEEEEE--eeecCCCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEE
Confidence 21 1223689999999999 565 55 4 99999998543211000011 1111 135889999889999999999
Q ss_pred EcCCcceEEEEEEE--EEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEe
Q psy2145 393 VNELGEAVTSSTLF--VESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIIT 470 (808)
Q Consensus 393 ~n~~g~~~~~~~l~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 470 (808)
.|..|.. .+..+. |...+... +.
T Consensus 210 ~n~~~~~-~~~~v~l~V~~~~~~~---------------~~--------------------------------------- 234 (475)
T 1iga_A 210 KHYTNPS-QDVTVPCPVPSTPPTP---------------SP--------------------------------------- 234 (475)
T ss_pred EECCCCc-eeeeEecccccCcccc---------------cc---------------------------------------
Confidence 9988742 222333 21110000 00
Q ss_pred cccCCchhhhhcccccCCCCCCCCcCCCCccCCCee-eecCCCcccccCCCceEEEEEEeeCCCCC---cEEEEEECCEe
Q psy2145 471 DTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVF-TKPLQNIDAVEEGKNAHFSCRLIPVGDPT---LKVEWFRNEKP 546 (808)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f-~~~~~~~~~v~~G~~v~l~C~v~~~g~P~---~~v~W~k~g~~ 546 (808)
.+........ .+|.+ ..++... .+.+|+.+.|.|.+ .|.++ +.|+| ++..
T Consensus 235 --------------------~~~~~~~~~~-~~p~v~~~~p~~~-~~~~G~~v~L~C~~--~g~~p~~~~~i~W--~~~~ 288 (475)
T 1iga_A 235 --------------------STPPTPSPSC-CHPRLSLHRPALE-DLLLGSEANLTCTL--TGLRDASGVTFTW--TPSS 288 (475)
T ss_pred --------------------cccccCCCCC-CCcEEEEcCCChH-HhccCCceEEEEEE--EcccCCCceEEEE--CCCC
Confidence 0000000000 12332 3332222 36899999999999 56544 68999 5444
Q ss_pred cCCCCC-eEEEe-eC---cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCC
Q psy2145 547 LEDSSR-ITTKH-DF---GYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQP 621 (808)
Q Consensus 547 l~~~~~-~~~~~-~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~ 621 (808)
+..... ..... ++ ....|.|.++..+|+|.|+|.|.|..|.......|.+..
T Consensus 289 ~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~----------------------- 345 (475)
T 1iga_A 289 GKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSG----------------------- 345 (475)
T ss_pred cCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCC-----------------------
Confidence 432211 11111 11 223699999999999999999999999865555553311
Q ss_pred CCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-C-CeEEEEEECCEEccCCCcE----EEE---EeCC
Q psy2145 622 ASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-P-TMRFEWFVNGVELKMGSRF----HVQ---HDFG 692 (808)
Q Consensus 622 ~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P-~p~i~W~~~g~~l~~~~~~----~~~---~~~~ 692 (808)
...+|.+.........+.+|+.+.|.|.+ .|. | .+.|.|+|||..|..+... ... .++.
T Consensus 346 ----------~~~~P~v~~~~~~~~~v~~g~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~gt 413 (475)
T 1iga_A 346 ----------NTFRPEVHLLPPPSEELALNELVTLTCLA--RGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTT 413 (475)
T ss_pred ----------CCCCCeEEEECCChHHhccCCceEEEEEE--eeeECCCCEEEEEECCEECCCCceeecccccccCCCCCc
Confidence 01246655554443457889999999999 675 3 3599999999999765411 111 1111
Q ss_pred ---EEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 693 ---YVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 693 ---~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.+.|.|.....+|.|.|+|.|.|....
T Consensus 414 ~~~~s~L~i~~~~~~~~g~YtC~a~n~~l~ 443 (475)
T 1iga_A 414 FAVTSILRVAAEDWKKGDTFSCMVGHEALP 443 (475)
T ss_pred EEEEEEEEEChHHhcCCCEEEEEEEcCCCC
Confidence 246888888888999999999999754
No 55
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=100.00 E-value=2.2e-35 Score=314.77 Aligned_cols=298 Identities=22% Similarity=0.368 Sum_probs=149.3
Q ss_pred CCceEeecCCeEEEEEEEeecCC-CccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy2145 322 MRDIHVAENQAAHFEARLIPVGD-SKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV 400 (808)
Q Consensus 322 ~~~~~v~~G~~~~l~C~~~~~g~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 400 (808)
+....+.+|+.+.|.|.+ .+. |.+.|.|+|+|..+..+.++.+. ..+|.|.++..+|+|.|+|.|.|. |...
T Consensus 15 ~~~~~v~~G~~v~l~C~~--~~~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~ 87 (334)
T 1ry7_B 15 QEQLVFGSGDAVELSCPP--PGGGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQRLT-QRVL 87 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCcEEEecCCcEEEEeeC--CCCCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEEeC-CeEE
Confidence 667889999999999998 555 67899999999998877666542 237999999999999999999999 7777
Q ss_pred EEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhh
Q psy2145 401 TSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEK 480 (808)
Q Consensus 401 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (808)
..+.|.|...+...........
T Consensus 88 ~~~~l~V~~~~~~~~~~~~~~~---------------------------------------------------------- 109 (334)
T 1ry7_B 88 CHFSVRVTDAPSSGDDEDGEDE---------------------------------------------------------- 109 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEeccCccccccccccc----------------------------------------------------------
Confidence 7788888765422100000000
Q ss_pred hcccccCCCCCCCCcCCCCccCCCeeeecCC---CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeE-EE
Q psy2145 481 IRKLEDTEPHKRPEVDDNATKQRPVFTKPLQ---NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRIT-TK 556 (808)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~---~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~-~~ 556 (808)
.........+|.|..+.. ....+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+....++. ..
T Consensus 110 -------------~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~ 174 (334)
T 1ry7_B 110 -------------AEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPA--AGNPTPSISWLKNGREFRGEHRIGGIK 174 (334)
T ss_dssp ----------------------CCCCSCCTTCCCCEEEEETTCCEEEECCC--CCSSCCEEECCBTTBCCCTTSSTTCCC
T ss_pred -------------cccccccCCCCEEeccccccceeEEecCCCcEEEEEEc--cCCCCCeEEEEECCEECccccccccee
Confidence 000000112444444321 11257899999999998 799999999999999887654431 11
Q ss_pred eeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC
Q psy2145 557 HDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP 636 (808)
Q Consensus 557 ~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P 636 (808)
...+...|.|.+++.+|+|.|+|.|.|..|....++.|.|...+. .+|
T Consensus 175 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~--------------------------------~~p 222 (334)
T 1ry7_B 175 LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP--------------------------------HRP 222 (334)
T ss_dssp CCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC--------------------------------SSC
T ss_pred cccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC--------------------------------CCC
Confidence 222333799999999999999999999999999999999986432 123
Q ss_pred eEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEE----CCEEccCCCcE--EEEEe-------CCEEEEEEccCCC
Q psy2145 637 IFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFV----NGVELKMGSRF--HVQHD-------FGYVTLDITKCVP 703 (808)
Q Consensus 637 ~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~----~g~~l~~~~~~--~~~~~-------~~~~~L~I~~v~~ 703 (808)
.+.........+.+|+.+.|.|.+ .|.|.|.|.|+| ||..+..+.+. .+... ...+.|.|.++..
T Consensus 223 ~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~ 300 (334)
T 1ry7_B 223 ILQAGLPANQTAVLGSDVEFHCKV--YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTF 300 (334)
T ss_dssp BCCTTCSCCEEEESSCCEEECCCC--BCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCT
T ss_pred ceEecCCCceEEeCCCCEEEEEEE--ecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCH
Confidence 333333334568899999999999 799999999999 88888755431 22111 1234799999999
Q ss_pred CCcEEEEEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 704 ADSGVYMCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
+|+|.|+|.|.|.+|....++.|.|...|.
T Consensus 301 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 301 EDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp TSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred HHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 999999999999999999999999998764
No 56
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=2e-36 Score=335.09 Aligned_cols=379 Identities=12% Similarity=0.159 Sum_probs=236.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEe---e--------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPV---T--------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l---~--------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||+ |..+ . ...|+.+..+ ++..+|.
T Consensus 3 l~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 81 (434)
T 1igy_B 3 LQESGAE-LARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIH 81 (434)
T ss_dssp EECCCCC-EECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEE
T ss_pred eECCCCe-EecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEE
Confidence 4556777 89999999999999852124678999996 3321 1 1347766544 3456899
Q ss_pred EcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK 191 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 191 (808)
|.+++.+|+|.|+|.|.|..+.....+.|.|.... ..+|.+.....
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~~~~~ 127 (434)
T 1igy_B 82 LSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAK----------------------------------TTPPSVYPLAP 127 (434)
T ss_dssp ECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSC----------------------------------CBCCCEEEECC
T ss_pred ECCCChHHCEEEEEEEEccccccCCceEEEEccCC----------------------------------CCCCeEEEcCC
Confidence 99999999999999999865544455677775311 23455544333
Q ss_pred ceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeCceeE
Q psy2145 192 NCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNALGQA 267 (808)
Q Consensus 192 ~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 267 (808)
...+.+|+.++|.|.+.+ ..|.+ .|.|+|+|..+...........+. ...|.|.++..+| |.|+|.|.|..|..
T Consensus 128 ~~~~~~G~~v~L~C~~~g-~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~ 205 (434)
T 1igy_B 128 GSAAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASST 205 (434)
T ss_dssp CCCCCCTTEEEEEEEEEE-EBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTC
T ss_pred ccccCCCCcEEEEEEEee-ecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCc
Confidence 445689999999999953 23655 999999987632100000011111 1369999999999 99999999998875
Q ss_pred EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceE-eecCCeEEEEEEEeecCCC-
Q psy2145 268 VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIH-VAENQAAHFEARLIPVGDS- 345 (808)
Q Consensus 268 ~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~-v~~G~~~~l~C~~~~~g~p- 345 (808)
.....+.+.... ..+ .. .. ....+..+..++.... +.+|+.+.|.|.+ .|.+
T Consensus 206 ~~~~~~~~~~~~-~~v--------------------~~--~~-~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~--~g~~p 259 (434)
T 1igy_B 206 KVDKKIVPRDCG-CKP--------------------CI--CT-VPEVSSVFIFPPKPKDTLLITVTPKVTCVV--VDISK 259 (434)
T ss_dssp CEEEECCCCCCC-CCC--------------------CC--CC-CSSSCCEEEECCCHHHHHSTTSCCEEEEEE--CCCCS
T ss_pred cceeeccCCCCC-Ccc--------------------cc--CC-CCcCcEEEEeCCChHHhcccCCCcEEEEEE--ecccc
Confidence 544444332100 000 00 00 0001233344433332 7899999999999 5663
Q ss_pred ---ccEEEEEECCEeccCCCcEEE--EeeC---cEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccc
Q psy2145 346 ---KLKVTWLRNGVPIQASNRVST--MHDF---GYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDT 417 (808)
Q Consensus 346 ---~~~v~W~~~g~~l~~~~~~~~--~~~~---~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~ 417 (808)
.+.|.|+|+|..+........ ..++ ...+|.|.++..+|+|.|+|.|.|..|.......+.+.
T Consensus 260 ~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~--------- 330 (434)
T 1igy_B 260 DDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKT--------- 330 (434)
T ss_dssp SCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCC---------
T ss_pred CCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEecc---------
Confidence 468999999987754321111 1111 12369999999999999999999988864221111110
Q ss_pred cchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCC
Q psy2145 418 QNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDD 497 (808)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (808)
T Consensus 331 -------------------------------------------------------------------------------- 330 (434)
T 1igy_B 331 -------------------------------------------------------------------------------- 330 (434)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccCCCeeeecCCCcccccCCCceEEEEEEeeCC-CC-CcEEEEEECCEecCCCCCeEE--EeeCcE---EEEEECCCC
Q psy2145 498 NATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG-DP-TLKVEWFRNEKPLEDSSRITT--KHDFGY---VAMDLSHVR 570 (808)
Q Consensus 498 ~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g-~P-~~~v~W~k~g~~l~~~~~~~~--~~~~~~---~~L~I~~v~ 570 (808)
.....+|.+....... ...+|+.+.|.|.+ .| .| .+.|+|+|||+.+........ ..++.+ ..|.|....
T Consensus 331 ~~~~~~P~v~~~~~~~-~~~~~~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~ 407 (434)
T 1igy_B 331 KGKPRAPQVYTIPPPK-EQMAKDKVSLTCMI--TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSN 407 (434)
T ss_dssp CSCCBCCCCEEECCCS-SSSSSSEEEEEEEE--EEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHH
T ss_pred CCCCcCCEEEEECCCH-HHhcCCcEEEEEEE--EeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchh
Confidence 0011234333322222 13457789999999 56 34 358999999998854321111 112211 357888887
Q ss_pred CCCCEEEEEEEEeCCe
Q psy2145 571 AEDEGIYICKATNALG 586 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G 586 (808)
.+|+|.|+|.|.|...
T Consensus 408 ~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 408 WEAGNTFTCSVLHEGL 423 (434)
T ss_dssp HHTTCCEEEEEEETTS
T ss_pred ccCCCEEEEEEEcCCC
Confidence 7899999999999854
No 57
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=100.00 E-value=1.6e-33 Score=293.86 Aligned_cols=268 Identities=19% Similarity=0.203 Sum_probs=203.6
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
.+|.|...+....+.+|+.+.|.|.+ .+ .|.|+++|..+ .. ...++ .+|.|.++..+|+|.|+|.|.
T Consensus 11 ~~P~i~~~~~~~~v~~G~~v~l~C~~--~~----~i~W~~~~~~~----~~-~~~~~--~~L~i~~~~~~d~G~Y~C~~~ 77 (290)
T 2o26_X 11 SPPSIHPAQSELIVEAGDTLSLTCID--PD----FVRWTFKTYFN----EM-VENKK--NEWIQEKAEATRTGTYTCSNS 77 (290)
T ss_dssp -CCEESSCSSEEEEETTSCEEEEEEC--TT----EEEEEEECSSS----CE-EEECS--SEEEETTCCGGGCEEEEEEES
T ss_pred CCCEEeCCCCeEEEcCCCcEEEEECC--CC----cEEEecCCcce----ee-ecCCC--ceEEEeccCHHhCeEEEEEee
Confidence 47888877888899999999999998 55 89999999877 11 12222 489999999999999999999
Q ss_pred cCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEeccc
Q psy2145 394 NELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQ 473 (808)
Q Consensus 394 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 473 (808)
| |. ..++.|.|..++.+.
T Consensus 78 n--g~-~~~~~l~V~~~~~~~----------------------------------------------------------- 95 (290)
T 2o26_X 78 N--GL-TSSIYVFVRDPAKLF----------------------------------------------------------- 95 (290)
T ss_dssp S--SC-EEEEEEEEECSSCCB-----------------------------------------------------------
T ss_pred C--Cc-cEEEEEEEeCCCccc-----------------------------------------------------------
Confidence 9 54 666788887543211
Q ss_pred CCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC-cEEEE-EECCEecCCCC
Q psy2145 474 HPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT-LKVEW-FRNEKPLEDSS 551 (808)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~-~~v~W-~k~g~~l~~~~ 551 (808)
....+. .+.+|+.+.|.|.+ .+ |. +.++| ++||..+..+.
T Consensus 96 ----------------------------------~~~~~~-~~~~g~~v~l~C~~--~~-p~~~~v~W~~~~g~~l~~~~ 137 (290)
T 2o26_X 96 ----------------------------------LVGLPL-FGKEDSDALVRCPL--TD-PQVSQYSLIECDGKSLPTDL 137 (290)
T ss_dssp ----------------------------------CCCCCE-EEETTSCEEECCCB--SC-CSCEEEEEEETTSCCCCTTC
T ss_pred ----------------------------------ccccce-EEecCCeEEEeCcC--CC-CCCceEEEEeCCCcCCCCCC
Confidence 111111 47789999999998 55 77 99999 57999988776
Q ss_pred CeEEEeeCcEEEEEECCCCCCCCE-EEEEEEEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCC
Q psy2145 552 RITTKHDFGYVAMDLSHVRAEDEG-IYICKATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEP 629 (808)
Q Consensus 552 ~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C~a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~ 629 (808)
++...... .|.|.++..+|+| .|+|.|.|..|...+ .+.|.|...+.
T Consensus 138 ~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~---------------------------- 186 (290)
T 2o26_X 138 TFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIK---------------------------- 186 (290)
T ss_dssp EEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCC----------------------------
T ss_pred ceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCC----------------------------
Confidence 66555443 6999999999999 999999999666443 47777763211
Q ss_pred ccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeE-EEEEECCEEc----cCCCcEEEE---EeCCEEEEEEccC
Q psy2145 630 ERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMR-FEWFVNGVEL----KMGSRFHVQ---HDFGYVTLDITKC 701 (808)
Q Consensus 630 ~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~-i~W~~~g~~l----~~~~~~~~~---~~~~~~~L~I~~v 701 (808)
.+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|. |.|+|+|..+ .......+. .......|.|.++
T Consensus 187 ----~~P~i~~~~~~-~~v~~G~~v~l~C~~--~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 259 (290)
T 2o26_X 187 ----AIPVVSVPETS-HLLKKGDTFTVVCTI--KDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSA 259 (290)
T ss_dssp ----SCCEEECSCSB-CCCCTTCCEEEEEEE--EESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSC
T ss_pred ----CCCccccCCCc-ceEecCCcEEEEEEE--ecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCC
Confidence 24666555443 478999999999999 6999996 9999999873 333333332 1233568999999
Q ss_pred CCCCcEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 702 VPADSGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 702 ~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
..+|+|.|+|.|.|.+|..+.++.|.|..+|
T Consensus 260 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P 290 (290)
T 2o26_X 260 RVDDSGVFMCYANNTFGSANVTTTLKVVEKG 290 (290)
T ss_dssp CSSSCEEEEEEEECSSCEEEEEEEECC----
T ss_pred CcccCeEEEEEEeCCCCcEEEEEEEEEEeCC
Confidence 9999999999999999999999999998765
No 58
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=100.00 E-value=7.9e-36 Score=330.24 Aligned_cols=376 Identities=13% Similarity=0.179 Sum_probs=234.7
Q ss_pred ecCceeecCCCeEEEEEEEeecCC--CCeEEEEeeC--CEEcc-----------------CCCceEEEec--CceEEEEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSD--NTMKVEWFHN--NVPIK-----------------SGSRFTETNN--FGFVALDI 245 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~--p~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I 245 (808)
.+..+.+.+|++|+|.|.+. +. +.+.|.|||+ |..+. ...|+.+..+ ++..+|.|
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (434)
T 1igy_B 5 ESGAELARPGASVKMSCKAS--GYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHL 82 (434)
T ss_dssp CCCCCEECTBCCEEECCEEC--SSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEE
T ss_pred CCCCeEecCCCCEEEEEEcc--CCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEE
Confidence 44567899999999999994 44 3678999996 33210 1235554432 34558999
Q ss_pred ccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCce
Q psy2145 246 MQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDI 325 (808)
Q Consensus 246 ~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~ 325 (808)
.+++.+|+|.|+|.|.|..+.....+.|.|.... ..+|.+.......
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~---------------------------------~~~P~i~~~~~~~ 129 (434)
T 1igy_B 83 SSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAK---------------------------------TTPPSVYPLAPGS 129 (434)
T ss_dssp CSBCGGGCSEECCCCSSSSCCCCCCEECEECCSC---------------------------------CBCCCEEEECCCC
T ss_pred CCCChHHCEEEEEEEEccccccCCceEEEEccCC---------------------------------CCCCeEEEcCCcc
Confidence 9999999999999999865444455677775311 1234333222223
Q ss_pred EeecCCeEEEEEEEeecCC-Ccc-EEEEEECCEeccCCCcEEEEeeCc---EEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy2145 326 HVAENQAAHFEARLIPVGD-SKL-KVTWLRNGVPIQASNRVSTMHDFG---YVALNFKYTYPEDSGTYTCRAVNELGEAV 400 (808)
Q Consensus 326 ~v~~G~~~~l~C~~~~~g~-p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 400 (808)
.+.+|+.+.|.|.+ .|. |.+ .|.|+++|..+...........+. ...|.|..+..+| |.|+|.|.|..|...
T Consensus 130 ~~~~G~~v~L~C~~--~g~~P~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~ 206 (434)
T 1igy_B 130 AAQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTK 206 (434)
T ss_dssp CCCCTTEEEEEEEE--EEEBSSCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCC
T ss_pred ccCCCCcEEEEEEE--eeecCCCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCcc
Confidence 35789999999999 454 665 999999997532100000001111 1369999999889 999999999998764
Q ss_pred EEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhh
Q psy2145 401 TSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEK 480 (808)
Q Consensus 401 ~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (808)
....+.+.... .. + ..
T Consensus 207 ~~~~~~~~~~~-~~--------------------v----------~~--------------------------------- 222 (434)
T 1igy_B 207 VDKKIVPRDCG-CK--------------------P----------CI--------------------------------- 222 (434)
T ss_dssp EEEECCCCCCC-CC--------------------C----------CC---------------------------------
T ss_pred ceeeccCCCCC-Cc--------------------c----------cc---------------------------------
Confidence 44333322100 00 0 00
Q ss_pred hcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC----CcEEEEEECCEecCCCCCeEE-
Q psy2145 481 IRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP----TLKVEWFRNEKPLEDSSRITT- 555 (808)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P----~~~v~W~k~g~~l~~~~~~~~- 555 (808)
. .....|+.++.++.....+.+|+.+.|.|.+ .|.| .+.|+|+|+|..+........
T Consensus 223 -----------~-----~~~~~p~v~~~~p~~~~~v~~G~~~~L~C~~--~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~ 284 (434)
T 1igy_B 223 -----------C-----TVPEVSSVFIFPPKPKDTLLITVTPKVTCVV--VDISKDDPEVQFSWFVDNVEVHTAQTQPRE 284 (434)
T ss_dssp -----------C-----CCSSSCCEEEECCCHHHHHSTTSCCEEEEEE--CCCCSSCCCCCBCBBSSSCCBCCCSCCCCC
T ss_pred -----------C-----CCCcCcEEEEeCCChHHhcccCCCcEEEEEE--eccccCCCCeEEEEEeCCcccCCcccCcce
Confidence 0 0000022333333222127899999999999 6763 468999999988754321111
Q ss_pred EeeC----cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCcc
Q psy2145 556 KHDF----GYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPER 631 (808)
Q Consensus 556 ~~~~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~ 631 (808)
...+ ....|.|.++..+|+|.|+|.|.|..|.......+.+.. .
T Consensus 285 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~--------------------------------~ 332 (434)
T 1igy_B 285 EQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK--------------------------------G 332 (434)
T ss_dssp CCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCC--------------------------------S
T ss_pred eCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccC--------------------------------C
Confidence 0111 123699999999999999999999988653222221100 1
Q ss_pred ccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-C-CeEEEEEECCEEccCCCcEEE--EEeCC---EEEEEEccCCCC
Q psy2145 632 QYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-P-TMRFEWFVNGVELKMGSRFHV--QHDFG---YVTLDITKCVPA 704 (808)
Q Consensus 632 ~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P-~p~i~W~~~g~~l~~~~~~~~--~~~~~---~~~L~I~~v~~~ 704 (808)
...+|.+....... ...+|+.++|.|.+ .|. | .+.|.|+|||.+|........ ..++. .+.|.|.....+
T Consensus 333 ~~~~P~v~~~~~~~-~~~~~~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~ 409 (434)
T 1igy_B 333 KPRAPQVYTIPPPK-EQMAKDKVSLTCMI--TDFFPEDITVEWQSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWE 409 (434)
T ss_dssp CCBCCCCEEECCCS-SSSSSSEEEEEEEE--EEEBCSCEEEEEEETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHH
T ss_pred CCcCCEEEEECCCH-HHhcCCcEEEEEEE--EeeECCCeEEEEEECCEecCCceeccceeCCCCcEEEEEEEEECchhcc
Confidence 11346655544432 24467789999999 574 4 359999999998854221111 11222 246788887778
Q ss_pred CcEEEEEEEEeCCcc
Q psy2145 705 DSGVYMCKAINRAGE 719 (808)
Q Consensus 705 D~G~Y~C~A~N~~G~ 719 (808)
|+|.|+|.|.|....
T Consensus 410 ~~g~YtC~a~n~~l~ 424 (434)
T 1igy_B 410 AGNTFTCSVLHEGLH 424 (434)
T ss_dssp TTCCEEEEEEETTSG
T ss_pred CCCEEEEEEEcCCCC
Confidence 899999999998653
No 59
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=100.00 E-value=2.8e-32 Score=284.39 Aligned_cols=268 Identities=16% Similarity=0.200 Sum_probs=203.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.+..+.+|++++|.|.+ .+ .|.|+|+|..+ ......+ .+|.|.+++.+|+|.|+|.|
T Consensus 10 ~~~P~i~~~~~~~~v~~G~~v~l~C~~--~~----~i~W~~~~~~~-----~~~~~~~--~~L~i~~~~~~d~G~Y~C~~ 76 (290)
T 2o26_X 10 PSPPSIHPAQSELIVEAGDTLSLTCID--PD----FVRWTFKTYFN-----EMVENKK--NEWIQEKAEATRTGTYTCSN 76 (290)
T ss_dssp --CCEESSCSSEEEEETTSCEEEEEEC--TT----EEEEEEECSSS-----CEEEECS--SEEEETTCCGGGCEEEEEEE
T ss_pred CCCCEEeCCCCeEEEcCCCcEEEEECC--CC----cEEEecCCcce-----eeecCCC--ceEEEeccCHHhCeEEEEEe
Confidence 457899888888999999999999998 44 89999999877 1122222 38999999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEe
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLI 340 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~ 340 (808)
.| |. ..++.|.|..++ .+...+....+.+|+.+.|.|.+
T Consensus 77 ~n--g~-~~~~~l~V~~~~-------------------------------------~~~~~~~~~~~~~g~~v~l~C~~- 115 (290)
T 2o26_X 77 SN--GL-TSSIYVFVRDPA-------------------------------------KLFLVGLPLFGKEDSDALVRCPL- 115 (290)
T ss_dssp SS--SC-EEEEEEEEECSS-------------------------------------CCBCCCCCEEEETTSCEEECCCB-
T ss_pred eC--Cc-cEEEEEEEeCCC-------------------------------------cccccccceEEecCCeEEEeCcC-
Confidence 99 54 667788886532 22244556778899999999998
Q ss_pred ecCCCc-cEEEE-EECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCe-EEEEEEEcCCcceEE-EEEEEEEeccccccc
Q psy2145 341 PVGDSK-LKVTW-LRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSG-TYTCRAVNELGEAVT-SSTLFVESKASLQLD 416 (808)
Q Consensus 341 ~~g~p~-~~v~W-~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G-~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~ 416 (808)
.+ |. +.++| ++||..+..+.++....++ .|.|.++..+|+| .|+|.|.|..|...+ .+.|.|...+
T Consensus 116 -~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~~---~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~----- 185 (290)
T 2o26_X 116 -TD-PQVSQYSLIECDGKSLPTDLTFVPNPKA---GITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAI----- 185 (290)
T ss_dssp -SC-CSCEEEEEEETTSCCCCTTCEEEEETTT---EEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCC-----
T ss_pred -CC-CCCceEEEEeCCCcCCCCCCceeeCCCC---CEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCC-----
Confidence 54 77 99999 5689988877666554443 6999999999999 999999998655433 3667765311
Q ss_pred ccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcC
Q psy2145 417 TQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVD 496 (808)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (808)
T Consensus 186 -------------------------------------------------------------------------------- 185 (290)
T 2o26_X 186 -------------------------------------------------------------------------------- 185 (290)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEECCEe----cCCCCCeEEE---eeCcEEEEEECC
Q psy2145 497 DNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFRNEKP----LEDSSRITTK---HDFGYVAMDLSH 568 (808)
Q Consensus 497 ~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k~g~~----l~~~~~~~~~---~~~~~~~L~I~~ 568 (808)
..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+. |+|+|+|.. +......... .......|.|.+
T Consensus 186 ----~~~P~i~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~ 258 (290)
T 2o26_X 186 ----KAIPVVSVPETSH-LLKKGDTFTVVCTI--KDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISS 258 (290)
T ss_dssp ----CSCCEEECSCSBC-CCCTTCCEEEEEEE--EESSTTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESS
T ss_pred ----CCCCccccCCCcc-eEecCCcEEEEEEE--ecCCcceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcC
Confidence 1245555544444 68899999999999 6889986 999999987 3433332222 112344899999
Q ss_pred CCCCCCEEEEEEEEeCCeeEEEEEEEEEEec
Q psy2145 569 VRAEDEGIYICKATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~ 599 (808)
+..+|+|.|+|.|.|..|..+.++.|.|..+
T Consensus 259 v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 259 ARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp CCSSSCEEEEEEEECSSCEEEEEEEECC---
T ss_pred CCcccCeEEEEEEeCCCCcEEEEEEEEEEeC
Confidence 9999999999999999999999999988764
No 60
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=100.00 E-value=4.2e-34 Score=304.76 Aligned_cols=304 Identities=19% Similarity=0.298 Sum_probs=147.9
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
+.+.+..|.++ .+.+|+.++|.|.+.+ ..|.+.|.|+|+|..|..+.|+.+. ..+|.|.+++.+|+|.|+|.|.
T Consensus 8 p~p~~~~~~~~-~v~~G~~v~l~C~~~~-~~p~~~v~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~ 81 (334)
T 1ry7_B 8 PGPEPGQQEQL-VFGSGDAVELSCPPPG-GGPMGPTVWVKDGTGLVPSERVLVG----PQRLQVLNASHEDSGAYSCRQR 81 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCcCcE-EEecCCcEEEEeeCCC-CCCCcceEEEECCeeCCCcccEEec----cceEEEeecccccCEEEEEEEE
Confidence 34455568888 8999999999999985 3467899999999999877776642 2379999999999999999999
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec----CceeecCCCeEEEE
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL----KNCEIKEGQRAHFE 204 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~----~~~~v~~G~~v~L~ 204 (808)
|. |.....+.|.|...+........... .++ ......+|.|..+. ....+.+|+.++|.
T Consensus 82 n~-~~~~~~~~l~V~~~~~~~~~~~~~~~------~~~----------~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~ 144 (334)
T 1ry7_B 82 LT-QRVLCHFSVRVTDAPSSGDDEDGEDE------AED----------TGVDTGAPYWTRPERMDKKLLAVPAANTVRFR 144 (334)
T ss_dssp ------------------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEE
T ss_pred eC-CeEEEEEEEEEeccCccccccccccc------ccc----------ccccCCCCEEeccccccceeEEecCCCcEEEE
Confidence 98 87777888887654321100000000 000 00012345554322 23678899999999
Q ss_pred EEEeecCCCCeEEEEeeCCEEccCCCceE-EEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccc
Q psy2145 205 CRLIPVSDNTMKVEWFHNNVPIKSGSRFT-ETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQT 283 (808)
Q Consensus 205 C~~~~~~~p~~~v~W~~~g~~l~~~~~~~-~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~ 283 (808)
|.+ .+.|.+.|.|+|+|..+....++. .....+..+|.|.+++.+|+|.|+|.|.|..|....++.|.|...+
T Consensus 145 C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~---- 218 (334)
T 1ry7_B 145 CPA--AGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS---- 218 (334)
T ss_dssp CCC--CCSSCCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCC----
T ss_pred EEc--cCCCCCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCC----
Confidence 998 578889999999999987655431 1122233489999999999999999999999998888899887532
Q ss_pred cccccchhhhhhhhhccccccccccccccCCCCeecc-CCCceEeecCCeEEEEEEEeecCCCccEEEEEE----CCEec
Q psy2145 284 ETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQ-PMRDIHVAENQAAHFEARLIPVGDSKLKVTWLR----NGVPI 358 (808)
Q Consensus 284 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~-~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~----~g~~l 358 (808)
..+|.+.. .+....+.+|+.+.|.|.+ .|.|.+.|.|++ ||..+
T Consensus 219 -----------------------------~~~p~~~~~~~~~~~~~~G~~v~l~C~~--~g~p~p~v~W~~~~~~~g~~~ 267 (334)
T 1ry7_B 219 -----------------------------PHRPILQAGLPANQTAVLGSDVEFHCKV--YSDAQPHIQWLKHVEVNGSKV 267 (334)
T ss_dssp -----------------------------CSSCBCCTTCSCCEEEESSCCEEECCCC--BCSSCEEEEEEECCCGGGCSB
T ss_pred -----------------------------CCCCceEecCCCceEEeCCCCEEEEEEE--ecCCCCeEEEEECCcCCCccc
Confidence 12344433 3456788999999999998 799999999999 78777
Q ss_pred cCCCc--EEEEee-------CcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEeccc
Q psy2145 359 QASNR--VSTMHD-------FGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKAS 412 (808)
Q Consensus 359 ~~~~~--~~~~~~-------~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~ 412 (808)
..+.+ +.+... .....|.|.++..+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 330 (334)
T 1ry7_B 268 GPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEE 330 (334)
T ss_dssp CTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEEECSCC
T ss_pred cCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEEEECCC
Confidence 65432 111111 1223699999999999999999999999999999999987653
No 61
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=100.00 E-value=2.8e-33 Score=300.37 Aligned_cols=280 Identities=20% Similarity=0.253 Sum_probs=175.4
Q ss_pred CCCceEeecCCeEEEEEEEeecCCCc-----------cEEEEEECCE------ecc---CCCcEEEEeeCcEEEEEEccC
Q psy2145 321 PMRDIHVAENQAAHFEARLIPVGDSK-----------LKVTWLRNGV------PIQ---ASNRVSTMHDFGYVALNFKYT 380 (808)
Q Consensus 321 ~~~~~~v~~G~~~~l~C~~~~~g~p~-----------~~v~W~~~g~------~l~---~~~~~~~~~~~~~~~L~I~~v 380 (808)
....+.+.+|+.+.|.|.+ .+.|. +.|.|+|+|. .+. ...++ ...++ +|.|.++
T Consensus 13 ~~~~v~v~~G~~v~L~C~~--~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~--~~~~~--~L~i~~~ 86 (349)
T 4dep_C 13 TMRQIQVFEDEPARIKCPL--FEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI--SKEKD--VLWFRPT 86 (349)
T ss_dssp CCCCCEEETTSCEEEECTC--CCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE--EEETT--EEEESSC
T ss_pred eeeeEEEecCCeEEEEccc--cccccccccccccCCCceEEEEECCCCCcccccccccccCceE--eecCC--EEEEccC
Confidence 3566789999999999998 66554 9999999884 222 12232 22334 7999999
Q ss_pred CCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCce
Q psy2145 381 YPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTE 460 (808)
Q Consensus 381 ~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 460 (808)
..+|+|.|+|.|.|..|....++.|.|..++.+..
T Consensus 87 ~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~--------------------------------------------- 121 (349)
T 4dep_C 87 LLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFN--------------------------------------------- 121 (349)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSC---------------------------------------------
T ss_pred ChhhCEEEEEEEecCCceEEEEEEEEEecCCcccC---------------------------------------------
Confidence 99999999999999999988889999886542210
Q ss_pred eecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEe---eCCCCCcE
Q psy2145 461 LVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLI---PVGDPTLK 537 (808)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~---~~g~P~~~ 537 (808)
+.+. .+.. ..+.+|+.+.|.|.+. ..|.|.+.
T Consensus 122 -------------------------------------------~~~~-~~~~-~~~~~g~~~~l~C~~~~~~~~g~p~~~ 156 (349)
T 4dep_C 122 -------------------------------------------SPMK-LPVH-KLYIEYGIQRITCPNVDGYFPSSVKPT 156 (349)
T ss_dssp -------------------------------------------CSCC-CCEE-EEETTCSEEEEECCSCTTSSCTTSCCE
T ss_pred -------------------------------------------cccc-cCcc-eeeecCccEEEEcCCCcccccCCCCce
Confidence 0000 0001 1467899999999731 04689999
Q ss_pred EEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCC-eeE---EEEEEEEEEecccccccccCccccc
Q psy2145 538 VEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNAL-GEA---VTTASMKIKTKAGLQLETQHPEGLK 613 (808)
Q Consensus 538 v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~-G~~---~~s~~l~V~~~~~i~~~~~~p~~~~ 613 (808)
|+|+|||..+....++. .++. .|.|.+++.+|+|.|+|.|.|.. |.. +..+.|.|...+..
T Consensus 157 v~W~k~~~~l~~~~~~~--~~~~--~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~----------- 221 (349)
T 4dep_C 157 ITWYMGCYKIQNFNNVI--PEGM--NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKN----------- 221 (349)
T ss_dssp EEEEETTEECCSCSSEE--EETT--EEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGG-----------
T ss_pred EEEeeCCEECCCcccee--ecCC--EEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCC-----------
Confidence 99999999997654443 3333 79999999999999999999987 554 55566666543211
Q ss_pred ccccccCCCCCCCCCCccccCCCeEEeecCCCc-cccCCceEEEEEEEeeC--CCCCeEEEEEECCEEccC-CCcEEEEE
Q psy2145 614 KIQELEQPASPMPQEPERQYEKPIFTQLLTGTS-EIMEGQSAHYDCRVVPV--GDPTMRFEWFVNGVELKM-GSRFHVQH 689 (808)
Q Consensus 614 ~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~-~v~~G~~v~l~C~v~~~--g~P~p~i~W~~~g~~l~~-~~~~~~~~ 689 (808)
..+|.+........ .+.+|+.++|.|.+... |.|.|.|.|++||..+.. +.++.+..
T Consensus 222 -------------------~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~ 282 (349)
T 4dep_C 222 -------------------AVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282 (349)
T ss_dssp -------------------CCSCEEC----------------CCCEEEEECCCTTCCCEEEEESSCC--------CCCCE
T ss_pred -------------------CCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccccCCcccccc
Confidence 01355554443322 68899999999999422 789999999999999876 33433311
Q ss_pred -------e--CCEEEEEEccCCCCCc-EEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 690 -------D--FGYVTLDITKCVPADS-GVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 690 -------~--~~~~~L~I~~v~~~D~-G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
+ ...++|.|.++..+|+ |.|+|.|.|.+|..+.++.|.|..
T Consensus 283 ~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 283 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp EEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred ceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 1 1134699999999999 999999999999999999999976
No 62
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=100.00 E-value=2.2e-32 Score=288.50 Aligned_cols=273 Identities=16% Similarity=0.165 Sum_probs=195.7
Q ss_pred ccCCCceEeecCCeEEEEEEEeecCCCcc-----EEEEEECCEec-------------cCCCcEEEEee-----CcEEEE
Q psy2145 319 TQPMRDIHVAENQAAHFEARLIPVGDSKL-----KVTWLRNGVPI-------------QASNRVSTMHD-----FGYVAL 375 (808)
Q Consensus 319 ~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-----~v~W~~~g~~l-------------~~~~~~~~~~~-----~~~~~L 375 (808)
...|..+.+..|+.++|.|.+ .+.+.+ .|+|+|+|... ....++..... .+..+|
T Consensus 4 v~~P~~v~~~~G~~v~L~C~v--~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL 81 (313)
T 4fqp_A 4 VQAPTQVPGFLGDSVTLPCYL--QVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASL 81 (313)
T ss_dssp EECCSEECCBTTSCEEECCEE--ECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCE
T ss_pred EcCCCEEEEecCCCEEEEEEE--ECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEE
Confidence 344556677899999999999 555543 59999987532 22334433221 122469
Q ss_pred EEccCCCCCCeEEEEEEEc-CCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEe
Q psy2145 376 NFKYTYPEDSGTYTCRAVN-ELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQ 454 (808)
Q Consensus 376 ~I~~v~~~d~G~Y~C~a~n-~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 454 (808)
.|.++..+|+|.|+|.|.+ ..|.....+.|.|...|
T Consensus 82 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P------------------------------------------- 118 (313)
T 4fqp_A 82 RMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKP------------------------------------------- 118 (313)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCC-------------------------------------------
T ss_pred EECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCC-------------------------------------------
Confidence 9999999999999999864 44555555666554332
Q ss_pred cCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC
Q psy2145 455 LNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP 534 (808)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P 534 (808)
.+....... .+..|+.+.|.|.+. .+.|
T Consensus 119 --------------------------------------------------~~~~~~~~~-~~~~~~~~~~~C~~~-~~~P 146 (313)
T 4fqp_A 119 --------------------------------------------------QNTAEVQKV-QLTGEPVPMARCVST-GGRP 146 (313)
T ss_dssp --------------------------------------------------EEEEEECCB-CCCSSCEEEEEEEEE-EEBS
T ss_pred --------------------------------------------------cceecccce-EeecCceEEEEEEcc-CccC
Confidence 122222222 366788899999874 5889
Q ss_pred CcEEEEEECCEecCCCCCeEEEeeCc---EEEEEECCCCCCCCEEEEEEEEeCCeeEEEE--EEEEEEecccccccccCc
Q psy2145 535 TLKVEWFRNEKPLEDSSRITTKHDFG---YVAMDLSHVRAEDEGIYICKATNALGEAVTT--ASMKIKTKAGLQLETQHP 609 (808)
Q Consensus 535 ~~~v~W~k~g~~l~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s--~~l~V~~~~~i~~~~~~p 609 (808)
.+.+.|++++..+..........++. ...|.|.++..+|+|.|+|.|.|..|....+ +.|.|..
T Consensus 147 ~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~----------- 215 (313)
T 4fqp_A 147 PAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYY----------- 215 (313)
T ss_dssp CCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCE-----------
T ss_pred CcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeeccccc-----------
Confidence 99999999998775433222111111 1259999999999999999999987765444 4444443
Q ss_pred ccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEE
Q psy2145 610 EGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTM-RFEWFVNGVELKMGSRFHVQ 688 (808)
Q Consensus 610 ~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p-~i~W~~~g~~l~~~~~~~~~ 688 (808)
+|.+.........+.+|+.++|.|.+ .|+|.| .|.|+|||.+|..+. .
T Consensus 216 -------------------------~P~v~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~~v~W~~~~~~l~~~~----~ 264 (313)
T 4fqp_A 216 -------------------------PPEVSISGYDNNWYLGQNEATLTCDA--RSNPEPTGYNWSTTMGPLPPFA----V 264 (313)
T ss_dssp -------------------------EEEEEEECCCSCEETTCCCEEEEEEE--EEESCCCEEEEEETTBSCCTTE----E
T ss_pred -------------------------CCccccccccceeecCCCeEEEEEEe--cCCCCCcEEEEEECCEECCCce----E
Confidence 25555444444567789999999999 799998 799999999887542 1
Q ss_pred EeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 689 HDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 689 ~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
..++ +|.|.++..+|+|.|+|.|+|.+|..+.++.|.|..+|
T Consensus 265 ~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 306 (313)
T 4fqp_A 265 AQGA--QLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGP 306 (313)
T ss_dssp EETT--EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred EeCC--EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCC
Confidence 2233 79999999999999999999999999999999998765
No 63
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=100.00 E-value=7.9e-34 Score=303.35 Aligned_cols=286 Identities=19% Similarity=0.251 Sum_probs=217.3
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeec-------CCCccEEEEEECCEec--cCCCcEEEEeeCcEEEEEEccCCCCC
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPV-------GDSKLKVTWLRNGVPI--QASNRVSTMHDFGYVALNFKYTYPED 384 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~-------g~p~~~v~W~~~g~~l--~~~~~~~~~~~~~~~~L~I~~v~~~d 384 (808)
..|.|...+....+.+|+.+.|.|.+ . +.|.+.|.|+++|..+ .......+...++ +|.|.++..+|
T Consensus 17 ~~p~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D 92 (339)
T 3o4o_C 17 SCRFRGRHYKREFRLEGEPVALRCPQ--VPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQED 92 (339)
T ss_dssp -CEEEEECSCCEEEETTBCCEEECTT--SCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTC
T ss_pred hhHhhCcCceEEEEECCccEEEEecc--ccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCccc
Confidence 47888888889999999999999998 5 8899999999999874 3331222223344 79999999999
Q ss_pred CeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecC
Q psy2145 385 SGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEG 464 (808)
Q Consensus 385 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 464 (808)
+|.|+|.|.|..|....++.|.|...+.....
T Consensus 93 ~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~------------------------------------------------ 124 (339)
T 3o4o_C 93 SGTYVCTTRNASYCDKMSIELRVFENTDAFLP------------------------------------------------ 124 (339)
T ss_dssp CEEEECCEEETTEEEEEEEEEEEECSCGGGHH------------------------------------------------
T ss_pred CEEEEEEEECCcceEEEEEEEEEEcCCCcccc------------------------------------------------
Confidence 99999999999998888888988865432100
Q ss_pred CceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEE-----EeeCCCCCcEEE
Q psy2145 465 EGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCR-----LIPVGDPTLKVE 539 (808)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~-----v~~~g~P~~~v~ 539 (808)
.+.. ...+.+|+.+.|.|. + .|.|.+.|.
T Consensus 125 ----------------------------------------~~~~----~~~~~~g~~v~l~C~~~~~~~--~g~p~~~v~ 158 (339)
T 3o4o_C 125 ----------------------------------------FISY----PQILTLSTSGVLVCPDLSEFT--RDKTDVKIQ 158 (339)
T ss_dssp ----------------------------------------HHCE----EEEEETTSCEEEECCSCTTTC--CSSSCCCBC
T ss_pred ----------------------------------------cccc----ceEEECCCCEEEEecCCcccc--cCCCCceEE
Confidence 0000 014678999999999 6 789999999
Q ss_pred EEECCEecCCC-CCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCe----eEEEEEEEEEEecccccccccCcccccc
Q psy2145 540 WFRNEKPLEDS-SRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALG----EAVTTASMKIKTKAGLQLETQHPEGLKK 614 (808)
Q Consensus 540 W~k~g~~l~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G----~~~~s~~l~V~~~~~i~~~~~~p~~~~~ 614 (808)
|+|+|..+... .++......+ .|.|.+++.+|+|.|+|.|.|..| ....++.|.|...+..
T Consensus 159 W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~------------ 224 (339)
T 3o4o_C 159 WYKDSLLLDKDNEKFLSVRGTT--HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEE------------ 224 (339)
T ss_dssp CEESSCBCCTTCSSEEECTTSS--EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCC------------
T ss_pred EecCCeeCCCCCceeEEcCCcc--eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCC------------
Confidence 99999999766 4554443333 799999999999999999999988 5677788888764321
Q ss_pred cccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEee-CCCC-CeEEEEEECCEEccC---------CC
Q psy2145 615 IQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVP-VGDP-TMRFEWFVNGVELKM---------GS 683 (808)
Q Consensus 615 i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~-~g~P-~p~i~W~~~g~~l~~---------~~ 683 (808)
.+|.|... .....+.+|+.+.|.|.+.. .|.| .+.+.|++||..+.. +.
T Consensus 225 -------------------~~P~i~~~-~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~ 284 (339)
T 3o4o_C 225 -------------------TIPVIISP-LKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGP 284 (339)
T ss_dssp -------------------CCCEECCC-SCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECC
T ss_pred -------------------CCCEEecC-CceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecc
Confidence 13565555 34457899999999999821 3888 899999999987643 33
Q ss_pred cEEEEEeCC---EEEEEEccCCCCCc-EEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 684 RFHVQHDFG---YVTLDITKCVPADS-GVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 684 ~~~~~~~~~---~~~L~I~~v~~~D~-G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
++.+..++. .++|.|.++..+|+ |.|+|.|.|.+|.++..+.|.+..+
T Consensus 285 ~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~~~ 336 (339)
T 3o4o_C 285 RQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEHHH 336 (339)
T ss_dssp CEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC---
T ss_pred eEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHhcc
Confidence 333333332 23799999999998 9999999999999999888876543
No 64
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=100.00 E-value=6.8e-32 Score=281.25 Aligned_cols=275 Identities=17% Similarity=0.236 Sum_probs=203.3
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEc
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVN 394 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 394 (808)
+|.+...+....+.+|+.+.|.|.+ .+ .|.|++++.... ......+..+|.|.++..+|+|.|+|.|.|
T Consensus 4 ~p~i~~~~~~~~v~~G~~v~L~C~~--~~----~v~W~~~~~~~~-----~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 72 (289)
T 3ejj_X 4 APVIEPSGPELVVEPGETVTLRCVS--NG----SVEWDGPISPYW-----TLDPESPGSTLTTRNATFKNTGTYRCTELE 72 (289)
T ss_dssp CCEEESCSSEEEECTTCCEEEEEEC--SS----CCEEECSCSSSS-----EECCCSSCCEEEESSCCGGGCEEEEEECCC
T ss_pred CcEecCCCceEEECCCCCEEEEEEe--CC----cEEEccCCCceE-----EEeccCCccEEEEeeeccccCEEEEEEEec
Confidence 6677777778889999999999998 45 499998774321 111222334899999999999999999999
Q ss_pred CCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccC
Q psy2145 395 ELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQH 474 (808)
Q Consensus 395 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (808)
..|.....+.|.|..++..
T Consensus 73 ~~~~~~~~~~l~V~~~~~~------------------------------------------------------------- 91 (289)
T 3ejj_X 73 DPMAGSTTIHLYVKDPAHS------------------------------------------------------------- 91 (289)
T ss_dssp -----CEEEEEEECCSSCS-------------------------------------------------------------
T ss_pred cCCcceeEEEEEEeCCCcc-------------------------------------------------------------
Confidence 9888777788888754321
Q ss_pred CchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEE-CCEecCCCCC
Q psy2145 475 PKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFR-NEKPLEDSSR 552 (808)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k-~g~~l~~~~~ 552 (808)
|...+... .+.+|+.+.|.|.+ .+.|.+. +.|++ +|..+..+.+
T Consensus 92 -------------------------------~~~~~~~~-~v~~g~~v~L~C~~--~~~~~~~~v~W~~~~~~~~~~~~~ 137 (289)
T 3ejj_X 92 -------------------------------WNLLAQEV-TVVEGQEAVLPCLI--TDPALKDSVSLMREGGRQVLRKTV 137 (289)
T ss_dssp -------------------------------EEESCSEE-EEETTSCEEECEEE--SCGGGGGSEEEEEGGGEECCTTCC
T ss_pred -------------------------------eecccceE-EEecCCceEeEEEc--cCCCcceEEEEEecCCeecCCCcc
Confidence 11222222 57899999999999 6777665 99986 7888887777
Q ss_pred eEEEeeCcEEEEEECCCCCCCCEEEEEEEE-eCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCcc
Q psy2145 553 ITTKHDFGYVAMDLSHVRAEDEGIYICKAT-NALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPER 631 (808)
Q Consensus 553 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~ 631 (808)
+....++ .|.|.+++.+|+|.|+|.|. |..|..+..+.|.|.....
T Consensus 138 ~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~------------------------------ 184 (289)
T 3ejj_X 138 YFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHP------------------------------ 184 (289)
T ss_dssp EEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCC------------------------------
T ss_pred EEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCC------------------------------
Confidence 7665443 69999999999999999999 5666667778888874211
Q ss_pred ccCCCeEEeecCCCccccCCceEEEEEEEeeCC-CCCeEEEEEECCEEccCCCcEEEEE--eCCEEEEEEccCCCCCcEE
Q psy2145 632 QYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVG-DPTMRFEWFVNGVELKMGSRFHVQH--DFGYVTLDITKCVPADSGV 708 (808)
Q Consensus 632 ~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~ 708 (808)
.+|.+...+.. ..+.+|+.+.|.|.+ .| .|.+.|.|+++|..+.......... .....+|.|.++..+|+|.
T Consensus 185 --~~p~i~~~~~~-~~~~~g~~~~l~C~~--~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~ 259 (289)
T 3ejj_X 185 --EPPQIKLEPSK-LVRIRGEAAQIVCSA--TNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGI 259 (289)
T ss_dssp --CCCEEEEESSS-EECCSSSCEEEEEEE--EESSSCCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEE
T ss_pred --CCCeEEecCCc-eEEEeCCcEEEEEEe--CCCCCceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEE
Confidence 23666655443 457899999999999 56 8999999999999987643322110 0114589999999999999
Q ss_pred EEEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 709 YMCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 709 Y~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
|+|.|.|.+|.+++++.|.+...+.
T Consensus 260 Y~C~a~N~~G~~~~s~~L~~~~~~~ 284 (289)
T 3ejj_X 260 YSCVASNDVGTRTATMNFQVVESHH 284 (289)
T ss_dssp EEEEEECSSCEEEEEEEEECC----
T ss_pred EEEEEEcCCCCccccEEEEEEeccc
Confidence 9999999999999999999987754
No 65
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=100.00 E-value=8.1e-32 Score=284.21 Aligned_cols=275 Identities=16% Similarity=0.171 Sum_probs=198.5
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCe-----EEEEeeCCEEc-------------cCCCceEEEec-----CceEE
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTM-----KVEWFHNNVPI-------------KSGSRFTETNN-----FGFVA 242 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-----~v~W~~~g~~l-------------~~~~~~~~~~~-----~~~~~ 242 (808)
++..|.++.+..|++|+|.|.+. +.+.+ .|.|+|+|... ....++..... .+..+
T Consensus 3 vv~~P~~v~~~~G~~v~L~C~v~--~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~s 80 (313)
T 4fqp_A 3 VVQAPTQVPGFLGDSVTLPCYLQ--VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNAS 80 (313)
T ss_dssp EEECCSEECCBTTSCEEECCEEE--CCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCC
T ss_pred EEcCCCEEEEecCCCEEEEEEEE--CCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceE
Confidence 45567788899999999999995 33332 59999987532 22333333211 13347
Q ss_pred EEEccCCCCCcEEEEEEEEe-CceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccC
Q psy2145 243 LDIMQCLPEDSGVYTCRAVN-ALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQP 321 (808)
Q Consensus 243 L~I~~~~~~D~G~Y~C~a~n-~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~ 321 (808)
|.|.+++.+|+|.|+|.|.+ ..|.....+.|.|.. +|.+...
T Consensus 81 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~-------------------------------------~P~~~~~ 123 (313)
T 4fqp_A 81 LRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA-------------------------------------KPQNTAE 123 (313)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBB-------------------------------------CCEEEEE
T ss_pred EEECcCChhhCEEEEEEEeeccCcceeeeeeeeecc-------------------------------------CCcceec
Confidence 99999999999999999864 556666666666544 4444444
Q ss_pred CCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCc---EEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 322 MRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFG---YVALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 322 ~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
+....+..|+.+.|.|.+. .+.|.+.+.|++++..+..........++. ...|.|..+..+|+|.|+|.|.|..+.
T Consensus 124 ~~~~~~~~~~~~~~~C~~~-~~~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~ 202 (313)
T 4fqp_A 124 VQKVQLTGEPVPMARCVST-GGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFE 202 (313)
T ss_dssp ECCBCCCSSCEEEEEEEEE-EEBSCCEEEEEETTCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSS
T ss_pred ccceEeecCceEEEEEEcc-CccCCcEEEeecCCccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcC
Confidence 4455667888999999873 588999999999998776543333222322 235899999999999999999998776
Q ss_pred eEEE--EEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCc
Q psy2145 399 AVTS--STLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPK 476 (808)
Q Consensus 399 ~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (808)
.... +.|.|..+|
T Consensus 203 ~~~~~~~~l~V~~~P----------------------------------------------------------------- 217 (313)
T 4fqp_A 203 KPQLLTVNLTVYYPP----------------------------------------------------------------- 217 (313)
T ss_dssp SCEEEEEECCBCEEE-----------------------------------------------------------------
T ss_pred ccceeeeecccccCC-----------------------------------------------------------------
Confidence 5443 444444332
Q ss_pred hhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCc-EEEEEECCEecCCCCCeEE
Q psy2145 477 GLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTL-KVEWFRNEKPLEDSSRITT 555 (808)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~-~v~W~k~g~~l~~~~~~~~ 555 (808)
.|.....+...+.+|+.++|.|.+ .|.|.| .|+|+|+|.+|....
T Consensus 218 ----------------------------~v~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~~v~W~~~~~~l~~~~---- 263 (313)
T 4fqp_A 218 ----------------------------EVSISGYDNNWYLGQNEATLTCDA--RSNPEPTGYNWSTTMGPLPPFA---- 263 (313)
T ss_dssp ----------------------------EEEEECCCSCEETTCCCEEEEEEE--EEESCCCEEEEEETTBSCCTTE----
T ss_pred ----------------------------ccccccccceeecCCCeEEEEEEe--cCCCCCcEEEEEECCEECCCce----
Confidence 222212222246789999999999 789988 699999999986542
Q ss_pred EeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 556 KHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 556 ~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
...++ +|.|.+++.+|+|.|+|.|.|..|..+.++.|.|...|.
T Consensus 264 ~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~PP 307 (313)
T 4fqp_A 264 VAQGA--QLLIRPVDKPINTTLICNVTNALGARQAELTVQVKEGPP 307 (313)
T ss_dssp EEETT--EEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEECCC-
T ss_pred EEeCC--EEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEeCCC
Confidence 12233 799999999999999999999999999999999987653
No 66
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=100.00 E-value=7.4e-32 Score=286.54 Aligned_cols=265 Identities=15% Similarity=0.187 Sum_probs=196.2
Q ss_pred CceEeecCCeEEEEEEEeecC---------CCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCe-EEEEEE
Q psy2145 323 RDIHVAENQAAHFEARLIPVG---------DSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSG-TYTCRA 392 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g---------~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G-~Y~C~a 392 (808)
....+.+|+.+.|.|.+ .+ .|.+.|+|+|+|..+....+. . .++ +|.|.++..+|+| .|+|.|
T Consensus 37 ~~v~v~eG~~v~L~C~~--~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~-~~~--~L~i~~v~~~D~Gs~Y~C~a 109 (329)
T 3oq3_B 37 MNDMAALGEPFSAKCPP--IEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--V-KNG--DLWIANYTSNDSHRRYLCTV 109 (329)
T ss_dssp EEEEECTTSCEEECCHH--HHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--E-ETT--EEEESSCCGGGGGCCEEEEE
T ss_pred ceEEEECCCeEEEEccC--CCCccccccccCCCCeeEEEECCCCccccCce--e-ecc--eEEEcCCChHhCCCcEEEEE
Confidence 45678999999999998 44 366899999999877654443 2 233 7999999999999 999999
Q ss_pred EcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecc
Q psy2145 393 VNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDT 472 (808)
Q Consensus 393 ~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 472 (808)
.|..|.......+.|...+
T Consensus 110 ~n~~g~~~~~~~~~v~~~~------------------------------------------------------------- 128 (329)
T 3oq3_B 110 TTKNGDCVQGIVRSHIRKP------------------------------------------------------------- 128 (329)
T ss_dssp ECTTSCEEEEEEEEEECCC-------------------------------------------------------------
T ss_pred EeCCCceeeEEEEEEEcCC-------------------------------------------------------------
Confidence 9999876554433333221
Q ss_pred cCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC-CcEEEEEECCEecCC-C
Q psy2145 473 QHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-TLKVEWFRNEKPLED-S 550 (808)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~~~v~W~k~g~~l~~-~ 550 (808)
|.+..+.... .+.+|+.+.|.|.+ .|.| .+.|+|+|+|..+.. .
T Consensus 129 -------------------------------p~~~~~~~~~-~~~~G~~v~L~C~~--~g~p~~~~i~W~k~~~~l~~~~ 174 (329)
T 3oq3_B 129 -------------------------------PSCIPETYEL-GTHDKYGIDLYCGI--LYAKHYNNITWYKNNQELIIDG 174 (329)
T ss_dssp -------------------------------CSCEEEEEET-TSSTTTCEEEECCC--CSCCCCCEEEEEETTEECCCSS
T ss_pred -------------------------------CcEeccccce-EEeCCCcEEEEecc--CCCCCCceEEEEECCccCCCCC
Confidence 1111111111 46789999999998 8999 999999999999863 3
Q ss_pred CCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeC--CeeEEEE----EEEEEEecccccccccCcccccccccccCCCCC
Q psy2145 551 SRITTKHDFGYVAMDLSHVRAEDEGIYICKATNA--LGEAVTT----ASMKIKTKAGLQLETQHPEGLKKIQELEQPASP 624 (808)
Q Consensus 551 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~G~~~~s----~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~ 624 (808)
.++... ++ .|.|.+++.+|+|.|+|.|.|. .|..... +.|.|...+...
T Consensus 175 ~~~~~~--~~--~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~--------------------- 229 (329)
T 3oq3_B 175 TKYSQS--GQ--NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHR--------------------- 229 (329)
T ss_dssp SSEEEE--TT--EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCC---------------------
T ss_pred ceEecC--CC--EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCC---------------------
Confidence 444433 33 7999999999999999999997 6544333 667776543210
Q ss_pred CCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCC---Ce-EEEEEECCEEc-cCCCcEEEE--EeC--CEEE
Q psy2145 625 MPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDP---TM-RFEWFVNGVEL-KMGSRFHVQ--HDF--GYVT 695 (808)
Q Consensus 625 ~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P---~p-~i~W~~~g~~l-~~~~~~~~~--~~~--~~~~ 695 (808)
.|.+ ......+.+|+.+.|.|.+ .|.| .+ .|.|+|||..+ ..+.+.... ..+ ...+
T Consensus 230 ----------~~~~---~~~~~~v~~G~~~~l~C~~--~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 294 (329)
T 3oq3_B 230 ----------FKLI---LDPKINVTIGEPANITCTA--VSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEAT 294 (329)
T ss_dssp ----------EEEE---CCSEEEECTTSCEEEEEEE--EETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEE
T ss_pred ----------Ccee---cCCeeEEecCCCEEEEEEE--EECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeE
Confidence 0111 2223568899999999999 6887 77 99999999985 444443322 222 3568
Q ss_pred EEEccCCCCCcE-EEEEEEEeCCcceEEEEEEEEE
Q psy2145 696 LDITKCVPADSG-VYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 696 L~I~~v~~~D~G-~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
|.|.++..+|+| .|+|.|.|.+|..+.++.|.|+
T Consensus 295 L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 295 LYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp EEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEEeccHHHCCCcEEEEEEecCCceEEEEEEEeC
Confidence 999999999999 9999999999999999999873
No 67
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=100.00 E-value=6.3e-33 Score=293.06 Aligned_cols=274 Identities=17% Similarity=0.190 Sum_probs=201.5
Q ss_pred CceEeecCCeEEEEEEEeecCCC-ccEEEEEECCEecc----CCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 323 RDIHVAENQAAHFEARLIPVGDS-KLKVTWLRNGVPIQ----ASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g~p-~~~v~W~~~g~~l~----~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
..+.+.+|+.+.|.|.+ .+.| .+.|.|+|+|..+. ...++... ++ +|.|.++..+|+|.|+|.|.|..|
T Consensus 13 ~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g 86 (315)
T 1itb_B 13 IILVSSANEIDVRPCPL--NPNEHKGTITWYKDDSKTPVSTEQASRIHQH--KE--KLWFVPAKVEDSGHYYCVVRNSSY 86 (315)
T ss_dssp CCCEEETTSCCCCBCCC--CSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--SS--BEECTTCCGGGCSCCEECCCSSSC
T ss_pred eEEEEcCCCcEEEEeec--cCcCCCceEEEEeCCCcCccccccCCcEecc--CC--eEEECCCChhhCEEEEEEEeCCce
Confidence 35678999999999998 6766 78999999986542 23343332 23 799999999999999999999988
Q ss_pred ceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCch
Q psy2145 398 EAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKG 477 (808)
Q Consensus 398 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (808)
.......+.|...+.
T Consensus 87 ~~~~~~~v~v~~~~p----------------------------------------------------------------- 101 (315)
T 1itb_B 87 CLRIKISAKFVENEP----------------------------------------------------------------- 101 (315)
T ss_dssp CCCEECCCEEECCCT-----------------------------------------------------------------
T ss_pred EEEEEEEEEEeCCCC-----------------------------------------------------------------
Confidence 776555555432211
Q ss_pred hhhhcccccCCCCCCCCcCCCCccCCCeeeecCC--CcccccCCCceEEEEEEe----eCCCCCcEEEEEECCEecCCCC
Q psy2145 478 LEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQ--NIDAVEEGKNAHFSCRLI----PVGDPTLKVEWFRNEKPLEDSS 551 (808)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~--~~~~v~~G~~v~l~C~v~----~~g~P~~~v~W~k~g~~l~~~~ 551 (808)
.+..... ....+.+|+.+.|.|.+. +.|.|.+.++|+|+|..+..+.
T Consensus 102 ---------------------------~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~ 154 (315)
T 1itb_B 102 ---------------------------NLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 154 (315)
T ss_dssp ---------------------------TSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCS
T ss_pred ---------------------------CcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCcc
Confidence 1100000 001477899999999851 1588999999999999997543
Q ss_pred CeEEEeeCcEEEEEECCCCCCCCEEEEEEEE-eCCeeEE---EEEEEEEEecccccccccCcccccccccccCCCCCCCC
Q psy2145 552 RITTKHDFGYVAMDLSHVRAEDEGIYICKAT-NALGEAV---TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQ 627 (808)
Q Consensus 552 ~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-N~~G~~~---~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~ 627 (808)
.. ....++ .|.|.+++.+|+|.|+|.|. |..|... ..+.+.+....
T Consensus 155 ~~-~~~~~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~--------------------------- 204 (315)
T 1itb_B 155 IH-FSGVKD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN--------------------------- 204 (315)
T ss_dssp SS-EEEETT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC---------------------------
T ss_pred ce-EeecCc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC---------------------------
Confidence 32 233334 79999999999999999999 7888773 33444343211
Q ss_pred CCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE----e--------CCEEE
Q psy2145 628 EPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQH----D--------FGYVT 695 (808)
Q Consensus 628 ~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~----~--------~~~~~ 695 (808)
...+|.|...+.....+.+|+.+.|.|.+ .|.|.|.|.|++||..+..+.+..... . ...+.
T Consensus 205 ----~~~~P~~~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (315)
T 1itb_B 205 ----KPTRPVIVSPANETMEVDLGSQIQLICNV--TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITV 278 (315)
T ss_dssp ----CCCCCEECSCCSEEEECCSSSCEEEEEEE--EECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEE
T ss_pred ----CCCCCEEecCCCCcEEEeCCCcEEEEEEE--ecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEE
Confidence 01246665554433568899999999999 799999999999999998765432211 1 12458
Q ss_pred EEEccCCCCC-cEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 696 LDITKCVPAD-SGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 696 L~I~~v~~~D-~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
|.|.++..+| +|.|+|.|.|.+|.++.++.|.|..
T Consensus 279 L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 279 LNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp EEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred EEEeecCHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 9999999999 9999999999999999999998854
No 68
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=100.00 E-value=5.8e-33 Score=292.29 Aligned_cols=273 Identities=15% Similarity=0.196 Sum_probs=194.5
Q ss_pred ceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccC-----------------CCcEEEEe-eCcEEEEEEccCCCCCC
Q psy2145 324 DIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQA-----------------SNRVSTMH-DFGYVALNFKYTYPEDS 385 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~-----------------~~~~~~~~-~~~~~~L~I~~v~~~d~ 385 (808)
.+.+.+|+.++|.|.+. .+.+.+.|+|+|++..... ..|+.+.. ..+..+|.|.++..+|+
T Consensus 8 ~vtv~~G~~v~L~C~v~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIE-VNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp SCEEETTSCEEECCBCC-CSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred EeEEEcCCcEEEEEEec-CCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 46788999999999973 3556678999996532211 12332221 11234799999999999
Q ss_pred eEEEEEEEcC-CcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecC
Q psy2145 386 GTYTCRAVNE-LGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEG 464 (808)
Q Consensus 386 G~Y~C~a~n~-~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 464 (808)
|.|+|.|.|. .|.....+.+.+...+.+.
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~-------------------------------------------------- 116 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPTVS-------------------------------------------------- 116 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCEEE--------------------------------------------------
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccccc--------------------------------------------------
Confidence 9999999886 5666666777776543211
Q ss_pred CceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC
Q psy2145 465 EGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE 544 (808)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g 544 (808)
+....... ....|+.+.|.|.+. .|.|.+.|+|+|+|
T Consensus 117 -----------------------------------------~~~~~~~~-~~~~~~~~~l~C~~~-~g~P~~~i~W~~~~ 153 (308)
T 4fom_A 117 -----------------------------------------LIKGPDSL-IDGGNETVAAICIAA-TGKPVAHIDWEGDL 153 (308)
T ss_dssp -----------------------------------------EEECSSCC-CTTCSCEEEEEEEEE-EEBSCCEEEECCCS
T ss_pred -----------------------------------------ccccccee-EEcCCceEEEEEEec-CCcCCceEEEEECC
Confidence 11111111 356789999999864 68999999999999
Q ss_pred EecCCCCCeEEE-eeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEE--EEEEEEecccccccccCcccccccccccCC
Q psy2145 545 KPLEDSSRITTK-HDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTT--ASMKIKTKAGLQLETQHPEGLKKIQELEQP 621 (808)
Q Consensus 545 ~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s--~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~ 621 (808)
..+......... .......|.|.++..+|+|.|+|.|.|..|....+ +.|.|...
T Consensus 154 ~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~---------------------- 211 (308)
T 4fom_A 154 GEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYA---------------------- 211 (308)
T ss_dssp SBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEE----------------------
T ss_pred cccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecC----------------------
Confidence 887643211000 00112369999999999999999999988765544 44444443
Q ss_pred CCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEeCCEEEEEEcc
Q psy2145 622 ASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTM-RFEWFVNGVELKMGSRFHVQHDFGYVTLDITK 700 (808)
Q Consensus 622 ~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~ 700 (808)
|.+.........+.+|+.++|.|.+ .|.|.| .|.|+|+|..+..+... .+...|.|.+
T Consensus 212 --------------P~~~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~~v~W~k~~~~~~~~~~~-----~~~~~l~i~~ 270 (308)
T 4fom_A 212 --------------PEVSVTGYDGNWFVGRKGVNLKCNA--DANPPPFKSVWSRLDGQWPDGLLA-----SDNTLHFVHP 270 (308)
T ss_dssp --------------EEECCBCCCSCEETTCCSCEEECCE--EEESCEEEEECCBSSSCCCSSCBC-----STTEEECCSC
T ss_pred --------------CeeEEcccceeeeeccccEEEEEEE--ecCCCCcEEEEEECCeECCCcEEE-----cCCeEEEECC
Confidence 4444333444567789999999999 799988 79999999888754321 2334688999
Q ss_pred CCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 701 CVPADSGVYMCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 701 v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
+..+|+|.|+|.|+|.+|.++.++.|.|..+|-
T Consensus 271 v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 303 (308)
T 4fom_A 271 LTFNYSGVYICKVTNSLGQRSDQKVIYISDPPH 303 (308)
T ss_dssp CCSCCCSEEEEEEEETTEEEEEEEECCEECCC-
T ss_pred CChhhCEEEEEEEEeCCCcEEEEEEEEEEcCCC
Confidence 999999999999999999999999999998874
No 69
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.98 E-value=6.9e-33 Score=296.04 Aligned_cols=287 Identities=19% Similarity=0.275 Sum_probs=215.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeec-----CCCCeEEEEeeCCEE--ccCCCceEEEecCceEEEEEccCCCCCc
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPV-----SDNTMKVEWFHNNVP--IKSGSRFTETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~-----~~p~~~v~W~~~g~~--l~~~~~~~~~~~~~~~~L~I~~~~~~D~ 253 (808)
...|.|...+.++.+.+|+++.|.|.+.+. +.|.+.|.|+|+|.. +....+..+...++ +|.|.+++.+|+
T Consensus 16 ~~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~ 93 (339)
T 3o4o_C 16 RSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDG--ALWLLPALQEDS 93 (339)
T ss_dssp --CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETT--EEEESSBCTTCC
T ss_pred hhhHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCC--eEEECCCCcccC
Confidence 457899999999999999999999998311 788899999999988 43332233333334 799999999999
Q ss_pred EEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeE
Q psy2145 254 GVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAA 333 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~ 333 (808)
|.|+|.|.|..|....++.|.|...+... .........+.+|+.+
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~-----------------------------------~~~~~~~~~~~~g~~v 138 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVFENTDAF-----------------------------------LPFISYPQILTLSTSG 138 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEECSCGGG-----------------------------------HHHHCEEEEEETTSCE
T ss_pred EEEEEEEECCcceEEEEEEEEEEcCCCcc-----------------------------------ccccccceEEECCCCE
Confidence 99999999999988888999987643210 0011123467899999
Q ss_pred EEEEE-----EeecCCCccEEEEEECCEeccCC-CcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcc----eEEEE
Q psy2145 334 HFEAR-----LIPVGDSKLKVTWLRNGVPIQAS-NRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGE----AVTSS 403 (808)
Q Consensus 334 ~l~C~-----~~~~g~p~~~v~W~~~g~~l~~~-~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~----~~~~~ 403 (808)
.|.|. + .|.|.+.|.|+++|..+... .++....+.+ .|.|.++..+|+|.|+|.|.|..|. ....+
T Consensus 139 ~l~C~~~~~~~--~g~p~~~v~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~ 214 (339)
T 3o4o_C 139 VLVCPDLSEFT--RDKTDVKIQWYKDSLLLDKDNEKFLSVRGTT--HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSI 214 (339)
T ss_dssp EEECCSCTTTC--CSSSCCCBCCEESSCBCCTTCSSEEECTTSS--EEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEE
T ss_pred EEEecCCcccc--cCCCCceEEEecCCeeCCCCCceeEEcCCcc--eEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEE
Confidence 99999 5 78899999999999998776 4555444333 7999999999999999999999874 45567
Q ss_pred EEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcc
Q psy2145 404 TLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRK 483 (808)
Q Consensus 404 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (808)
.|.|...+.
T Consensus 215 ~l~V~~~~~----------------------------------------------------------------------- 223 (339)
T 3o4o_C 215 ELRIKKKKE----------------------------------------------------------------------- 223 (339)
T ss_dssp EEEEECCCC-----------------------------------------------------------------------
T ss_pred EEEEEcCCC-----------------------------------------------------------------------
Confidence 777764321
Q ss_pred cccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEe-eCCCC-CcEEEEEECCEecCC---------CCC
Q psy2145 484 LEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLI-PVGDP-TLKVEWFRNEKPLED---------SSR 552 (808)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~-~~g~P-~~~v~W~k~g~~l~~---------~~~ 552 (808)
..+|.|..++... .+.+|+.+.|.|.+. ..|.| .+.+.|++||..+.. +.+
T Consensus 224 -----------------~~~P~i~~~~~~~-~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~ 285 (339)
T 3o4o_C 224 -----------------ETIPVIISPLKTI-SASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPR 285 (339)
T ss_dssp -----------------CCCCEECCCSCCC-CCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCC
T ss_pred -----------------CCCCEEecCCcee-EeccCCCEEEEEEEECCCCCCCCceEEEEECCeecccccccccceecce
Confidence 1145666654444 688999999999982 13777 889999999987653 223
Q ss_pred eEEEeeCc---EEEEEECCCCCCCC-EEEEEEEEeCCeeEEEEEEEEEE
Q psy2145 553 ITTKHDFG---YVAMDLSHVRAEDE-GIYICKATNALGEAVTTASMKIK 597 (808)
Q Consensus 553 ~~~~~~~~---~~~L~I~~v~~~D~-G~Y~C~a~N~~G~~~~s~~l~V~ 597 (808)
+....++. ...|.|.++..+|+ |.|+|.|.|..|+.+..+.+.+.
T Consensus 286 ~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~~~~~ 334 (339)
T 3o4o_C 286 QEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKEH 334 (339)
T ss_dssp EECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBCCCCC-
T ss_pred EEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEEEhhHh
Confidence 33332332 12699999999997 99999999999999887766554
No 70
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.98 E-value=2.9e-31 Score=282.00 Aligned_cols=266 Identities=19% Similarity=0.191 Sum_probs=199.3
Q ss_pred CCccccCCCCcEEEEEEEeeCC-------CCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCe-eEEEEEE
Q psy2145 57 KSIENLRERGHAHFECKLEPVT-------DSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSG-TYTCRAV 128 (808)
Q Consensus 57 ~~~~~v~~G~~v~l~C~~~~~~-------~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G-~Y~C~a~ 128 (808)
..+ .+.+|+++.|.|.+.+.. +|.+.|.|||+|..+....+. . ..+ +|.|.+++.+|+| .|+|.|.
T Consensus 37 ~~v-~v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~--~-~~~--~L~i~~v~~~D~Gs~Y~C~a~ 110 (329)
T 3oq3_B 37 MND-MAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--V-KNG--DLWIANYTSNDSHRRYLCTVT 110 (329)
T ss_dssp EEE-EECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTT--E-ETT--EEEESSCCGGGGGCCEEEEEE
T ss_pred ceE-EEECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCce--e-ecc--eEEEcCCChHhCCCcEEEEEE
Confidence 444 789999999999998632 267899999999887765554 2 223 7999999999999 9999999
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..|.......+.|. ..+|.+........+.+|+.+.|.|.+
T Consensus 111 n~~g~~~~~~~~~v~-------------------------------------~~~p~~~~~~~~~~~~~G~~v~L~C~~- 152 (329)
T 3oq3_B 111 TKNGDCVQGIVRSHI-------------------------------------RKPPSCIPETYELGTHDKYGIDLYCGI- 152 (329)
T ss_dssp CTTSCEEEEEEEEEE-------------------------------------CCCCSCEEEEEETTSSTTTCEEEECCC-
T ss_pred eCCCceeeEEEEEEE-------------------------------------cCCCcEeccccceEEeCCCcEEEEecc-
Confidence 998875555444443 223444444444557789999999998
Q ss_pred ecCCC-CeEEEEeeCCEEccC-CCceEEEecCceEEEEEccCCCCCcEEEEEEEEeC--ceeEEE----EEEEEEeeCCc
Q psy2145 209 PVSDN-TMKVEWFHNNVPIKS-GSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNA--LGQAVT----SGNLLVHSKKS 280 (808)
Q Consensus 209 ~~~~p-~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~--~g~~~~----~~~l~V~~~~~ 280 (808)
.+.| .+.|.|+|+|..+.. +.++... ++ .|.|.+++.+|+|.|+|.|.|. .|.... .+.|.|..++.
T Consensus 153 -~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~~--~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~ 227 (329)
T 3oq3_B 153 -LYAKHYNNITWYKNNQELIIDGTKYSQS--GQ--NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQD 227 (329)
T ss_dssp -CSCCCCCEEEEEETTEECCCSSSSEEEE--TT--EEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCC
T ss_pred -CCCCCCceEEEEECCccCCCCCceEecC--CC--EEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCC
Confidence 6788 899999999999863 4455444 23 8999999999999999999997 654333 36677765321
Q ss_pred ccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCC---cc-EEEEEECCE
Q psy2145 281 IQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDS---KL-KVTWLRNGV 356 (808)
Q Consensus 281 i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p---~~-~v~W~~~g~ 356 (808)
. ..|.+ .+....+.+|+.+.|.|.+ .|.| .+ .+.|+++|.
T Consensus 228 ~--------------------------------~~~~~--~~~~~~v~~G~~~~l~C~~--~g~p~~~~~i~v~W~~~g~ 271 (329)
T 3oq3_B 228 H--------------------------------RFKLI--LDPKINVTIGEPANITCTA--VSTSLLVDDVLIDWENPSG 271 (329)
T ss_dssp C--------------------------------CEEEE--CCSEEEECTTSCEEEEEEE--EETTCCTTCCEEEEECTTS
T ss_pred C--------------------------------CCcee--cCCeeEEecCCCEEEEEEE--EECCCCCCCcEEEEEECCe
Confidence 0 01233 4455788999999999999 6776 67 899999998
Q ss_pred ec-cCCCcEEEE--eeC--cEEEEEEccCCCCCCe-EEEEEEEcCCcceEEEEEEEE
Q psy2145 357 PI-QASNRVSTM--HDF--GYVALNFKYTYPEDSG-TYTCRAVNELGEAVTSSTLFV 407 (808)
Q Consensus 357 ~l-~~~~~~~~~--~~~--~~~~L~I~~v~~~d~G-~Y~C~a~n~~g~~~~~~~l~V 407 (808)
.+ ..+.+.... .++ ....|.|.++..+|+| .|+|.|.|..|....++.|.|
T Consensus 272 ~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 272 WIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred eeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 84 444433222 122 3458999999999999 999999999999998888876
No 71
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.98 E-value=9.2e-30 Score=286.63 Aligned_cols=422 Identities=14% Similarity=0.123 Sum_probs=235.1
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCC--eEEEEeeC--CEEc---c-------------CCCceEEEec--CceEEEEEc
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNT--MKVEWFHN--NVPI---K-------------SGSRFTETNN--FGFVALDIM 246 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~~~--g~~l---~-------------~~~~~~~~~~--~~~~~L~I~ 246 (808)
.+..+.+.+|++|+|.|.+.+..... ..+.|||+ |..+ . ...|+.+..+ .+.++|.|.
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 45678899999999999994211122 78999995 3221 0 1245655533 346799999
Q ss_pred cCCCCCcEEEEEEEEeCce-----------e--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccC
Q psy2145 247 QCLPEDSGVYTCRAVNALG-----------Q--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVS 313 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 313 (808)
+++.+|+|.|.|.+.+..| . ....+.|.|...+ .
T Consensus 86 ~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~---------------------------------~ 132 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP---------------------------------T 132 (512)
T ss_pred cCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC---------------------------------C
Confidence 9999999999999998642 1 1133567775311 1
Q ss_pred CCCeec-cCCCceEeecCCeEEEEEEEeecCC-Ccc-EEEEEECCEeccC-CCcEEEEeeCc---EEEEEEccCCCCCCe
Q psy2145 314 QAPVFT-QPMRDIHVAENQAAHFEARLIPVGD-SKL-KVTWLRNGVPIQA-SNRVSTMHDFG---YVALNFKYTYPEDSG 386 (808)
Q Consensus 314 ~~p~~~-~~~~~~~v~~G~~~~l~C~~~~~g~-p~~-~v~W~~~g~~l~~-~~~~~~~~~~~---~~~L~I~~v~~~d~G 386 (808)
.+|.+. ..+.......|+.+.|.|.+ .|. |.+ .|+|++++..... ........++. .+.|.|.....+ .|
T Consensus 133 ~~P~i~~~~~~~~~~~~~~~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g 209 (512)
T 1zvo_C 133 KAPDVFPIISGCRHPKDNSPVVLACLI--TGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QG 209 (512)
T ss_pred cCCeEEeccCCcccccCCCeEEEEEEE--EeeecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-Cc
Confidence 234333 11111112357899999999 454 654 9999997643210 00001111111 235888888777 99
Q ss_pred EEEEEEEcCCcceEEEE-----------EEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEec
Q psy2145 387 TYTCRAVNELGEAVTSS-----------TLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQL 455 (808)
Q Consensus 387 ~Y~C~a~n~~g~~~~~~-----------~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 455 (808)
.|+|.|.|..|.....+ .+.|..+|.+.. .+.. +...|.- ..
T Consensus 210 ~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~~------~~~~-------------------~~~~~~~--~~ 262 (512)
T 1zvo_C 210 EYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEG------SLAK-------------------ATTAPAT--TR 262 (512)
T ss_pred eEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchhc------cccc-------------------cccCchh--hc
Confidence 99999999988765544 223322221000 0000 0000000 00
Q ss_pred CCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCee-eecCCCcccccCCCceEEEEEEeeCCC-
Q psy2145 456 NGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVF-TKPLQNIDAVEEGKNAHFSCRLIPVGD- 533 (808)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f-~~~~~~~~~v~~G~~v~l~C~v~~~g~- 533 (808)
++ .+ ... ... .+..+. ...+.+..... -.....+|.+ +.++... .+.+|+.++|+|.+ .|.
T Consensus 263 ~g--~~-~~~--~~~--~~~~~~----~h~~~~~~~~~---~~~~~~~p~v~~~~p~~~-~~~~g~~~~L~C~v--~g~~ 325 (512)
T 1zvo_C 263 NT--GR-GGE--EKK--KEKEKE----EQEERETKTPE---CPSHTQPLGVYLLTPAVQ-DLWLRDKATFTCFV--VGSD 325 (512)
T ss_pred cC--cc-ccc--cee--ccCCcc----cccccCccccc---CCCCCCCCEEEEECCChH-HhccCCceEEEEEE--eceE
Confidence 00 00 000 000 000000 00000000000 0011234444 4443333 46789999999999 564
Q ss_pred C-CcEEEEEECCEecCCCCC--eEEEeeCc----EEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccc
Q psy2145 534 P-TLKVEWFRNEKPLEDSSR--ITTKHDFG----YVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLET 606 (808)
Q Consensus 534 P-~~~v~W~k~g~~l~~~~~--~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~ 606 (808)
| ...|+|+|||+.+..... ......++ ...|.|..+..+|.|.|+|.|.|..+... ...+.......
T Consensus 326 P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~----- 399 (512)
T 1zvo_C 326 LKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ----- 399 (512)
T ss_pred CCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC-----
Confidence 4 358999999998762211 11111222 23699999999999999999999987654 33332211000
Q ss_pred cCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEE-EEEEEeeCCCCC--eEEEEEECCEEccCCC
Q psy2145 607 QHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAH-YDCRVVPVGDPT--MRFEWFVNGVELKMGS 683 (808)
Q Consensus 607 ~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~-l~C~v~~~g~P~--p~i~W~~~g~~l~~~~ 683 (808)
...+|.+....... +|+.+. |.|.+ .|.++ ..|.|+|||.++..+.
T Consensus 400 -------------------------~~~~p~v~~~~~~~----~~~~~~~L~C~~--~g~~P~~i~v~W~k~g~~~~~~~ 448 (512)
T 1zvo_C 400 -------------------------APVKLSLNLLASSD----PPEAASWLLCEV--SGFSPPNILLMWLEDQREVNTSG 448 (512)
T ss_pred -------------------------CCCCCEEEEEccCc----CCCCceEEEEEE--eeeCCCCcEEEEEECCeECcCcc
Confidence 01235544433221 799999 99999 67543 4789999999997643
Q ss_pred cEE--E-EEeCC--E---EEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 684 RFH--V-QHDFG--Y---VTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 684 ~~~--~-~~~~~--~---~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
... + ...++ + +.|.|.....+|.|.|+|.|.|............
T Consensus 449 ~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~ 500 (512)
T 1zvo_C 449 FAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRS 500 (512)
T ss_pred ccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEE
Confidence 211 1 12223 2 4677777777789999999999976544443333
No 72
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.98 E-value=7e-31 Score=273.58 Aligned_cols=272 Identities=15% Similarity=0.186 Sum_probs=205.4
Q ss_pred eeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEec
Q psy2145 51 YTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNL 130 (808)
Q Consensus 51 ~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 130 (808)
.+...|..+ .+.+|+.++|.|.+.+ .|.|++++... .......+..+|.|.+++.+|+|.|+|.|.|.
T Consensus 6 ~i~~~~~~~-~v~~G~~v~L~C~~~~------~v~W~~~~~~~-----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 73 (289)
T 3ejj_X 6 VIEPSGPEL-VVEPGETVTLRCVSNG------SVEWDGPISPY-----WTLDPESPGSTLTTRNATFKNTGTYRCTELED 73 (289)
T ss_dssp EEESCSSEE-EECTTCCEEEEEECSS------CCEEECSCSSS-----SEECCCSSCCEEEESSCCGGGCEEEEEECCC-
T ss_pred EecCCCceE-EECCCCCEEEEEEeCC------cEEEccCCCce-----EEEeccCCccEEEEeeeccccCEEEEEEEecc
Confidence 334555666 8999999999999873 49999877432 12223334458999999999999999999998
Q ss_pred CcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeec
Q psy2145 131 VGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPV 210 (808)
Q Consensus 131 ~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~ 210 (808)
.|.....+.|.|... +..+...+....+.+|+++.|.|.+ .
T Consensus 74 ~~~~~~~~~l~V~~~-------------------------------------~~~~~~~~~~~~v~~g~~v~L~C~~--~ 114 (289)
T 3ejj_X 74 PMAGSTTIHLYVKDP-------------------------------------AHSWNLLAQEVTVVEGQEAVLPCLI--T 114 (289)
T ss_dssp ----CEEEEEEECCS-------------------------------------SCSEEESCSEEEEETTSCEEECEEE--S
T ss_pred CCcceeEEEEEEeCC-------------------------------------CcceecccceEEEecCCceEeEEEc--c
Confidence 888888888888532 1125566677889999999999999 4
Q ss_pred CCCCeE-EEEee-CCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEE-eCceeEEEEEEEEEeeCCcccccccc
Q psy2145 211 SDNTMK-VEWFH-NNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAV-NALGQAVTSGNLLVHSKKSIQTETQH 287 (808)
Q Consensus 211 ~~p~~~-v~W~~-~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-n~~g~~~~~~~l~V~~~~~i~~~~~~ 287 (808)
+.+.+. +.|++ +|..+..+.++....++ .|.|.++..+|+|.|+|.|. |..+.....+.|.|...
T Consensus 115 ~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~--------- 182 (289)
T 3ejj_X 115 DPALKDSVSLMREGGRQVLRKTVYFFSPWR---GFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRV--------- 182 (289)
T ss_dssp CGGGGGSEEEEEGGGEECCTTCCEEEETTT---EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESS---------
T ss_pred CCCcceEEEEEecCCeecCCCccEEECCCC---CEEEeecccccCEEEEEEEEeCCCccccccEEEEEEEC---------
Confidence 555554 99986 78888777777665544 69999999999999999999 55566667788888642
Q ss_pred cchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC-CCccEEEEEECCEeccCCCcEEE
Q psy2145 288 GESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG-DSKLKVTWLRNGVPIQASNRVST 366 (808)
Q Consensus 288 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~~v~W~~~g~~l~~~~~~~~ 366 (808)
...+|.+...+....+.+|+.+.|.|.+ .+ .|.+.+.|+++|..+........
T Consensus 183 ------------------------~~~~p~i~~~~~~~~~~~g~~~~l~C~~--~~~~p~~~i~W~~~~~~~~~~~~~~~ 236 (289)
T 3ejj_X 183 ------------------------HPEPPQIKLEPSKLVRIRGEAAQIVCSA--TNAEVGFNVILKRGDTKLEIPLNSDF 236 (289)
T ss_dssp ------------------------CCCCCEEEEESSSEECCSSSCEEEEEEE--EESSSCCEEEEEETTEECCCCEEEEE
T ss_pred ------------------------CCCCCeEEecCCceEEEeCCcEEEEEEe--CCCCCceEEEEEECCEEeeccCCccc
Confidence 1236777777777777899999999999 55 78999999999998876433221
Q ss_pred Eee--CcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecc
Q psy2145 367 MHD--FGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKA 411 (808)
Q Consensus 367 ~~~--~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 411 (808)
... ....+|.|.++..+|+|.|+|.|.|..|...+++.|.+...+
T Consensus 237 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 237 QDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp CSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC---
T ss_pred ccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEecc
Confidence 111 123489999999999999999999999999999999887653
No 73
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.98 E-value=1.2e-29 Score=285.80 Aligned_cols=407 Identities=12% Similarity=0.140 Sum_probs=236.0
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCC--ceEEEEeC--CEE---ee-------------ccCcEEEEee--CCeEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSN--LKVEWFKN--GRP---VT-------------IGHRFRPIHD--FGYVAL 110 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~--~~v~W~~~--g~~---l~-------------~~~r~~~~~~--~~~~~L 110 (808)
+..|..+ .+.+|++++|.|.+.+..... ..+.|||+ |.. |. ...|+.+..+ .+.++|
T Consensus 4 l~qp~~v-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 82 (512)
T 1zvo_C 4 LQESGPG-LVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSL 82 (512)
T ss_pred EECCCCE-EEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEE
Confidence 4567777 899999999999998421122 68999985 321 11 1357776654 346799
Q ss_pred EEcccCcCCCeeEEEEEEecCc-----------c--eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccc
Q psy2145 111 DIIDTIPEDSGTYTCRAVNLVG-----------F--AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIE 177 (808)
Q Consensus 111 ~I~~~~~~D~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (808)
.|.+++.+|+|.|.|.+.+..+ . ....+.|.|....
T Consensus 83 ~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~------------------------------- 131 (512)
T 1zvo_C 83 NLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAP------------------------------- 131 (512)
T ss_pred EECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccC-------------------------------
Confidence 9999999999999999988642 0 1234566665321
Q ss_pred cccCCCCeEEe-ecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEecCc----eEEEEEccCCCC
Q psy2145 178 ETTTQAPIFTT-SLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETNNFG----FVALDIMQCLPE 251 (808)
Q Consensus 178 ~~~~~~P~~~~-~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~ 251 (808)
..+|.+.. .+.......|+.++|.|.+.+ ..|. +.|.|++++..............+| ...|.|.....+
T Consensus 132 ---~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 207 (512)
T 1zvo_C 132 ---TKAPDVFPIISGCRHPKDNSPVVLACLITG-YHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR 207 (512)
T ss_pred ---CcCCeEEeccCCcccccCCCeEEEEEEEEe-eecCceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC
Confidence 23455442 222121235789999999963 3365 4999999765321000000111112 125889888777
Q ss_pred CcEEEEEEEEeCceeEEEEE-----------EEEEeeCCcccccc--cccchhhhhhhhhcc--------------ccc-
Q psy2145 252 DSGVYTCRAVNALGQAVTSG-----------NLLVHSKKSIQTET--QHGESLSRLQQLEQG--------------RYQ- 303 (808)
Q Consensus 252 D~G~Y~C~a~n~~g~~~~~~-----------~l~V~~~~~i~~~~--~~~~~~~~~~~~e~~--------------~~~- 303 (808)
.|.|+|.|.|..|.....+ .+.|..+|.+.-.- -.+ .... +.++ .+.
T Consensus 208 -~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~~~~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~h~~ 282 (512)
T 1zvo_C 208 -QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATT-APAT---TRNTGRGGEEKKKEKEKEEQEE 282 (512)
T ss_pred -CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchhcccccccc-Cchh---hccCcccccceeccCCcccccc
Confidence 9999999999888655443 23333222100000 000 0000 0000 000
Q ss_pred cccccc--cccCCCCe-eccCCCceEeecCCeEEEEEEEeecCC-C-ccEEEEEECCEeccCCC--cEEEEeeCc----E
Q psy2145 304 RTSIIE--DTVSQAPV-FTQPMRDIHVAENQAAHFEARLIPVGD-S-KLKVTWLRNGVPIQASN--RVSTMHDFG----Y 372 (808)
Q Consensus 304 ~~~~~~--~~~~~~p~-~~~~~~~~~v~~G~~~~l~C~~~~~g~-p-~~~v~W~~~g~~l~~~~--~~~~~~~~~----~ 372 (808)
...... .....+|. +..++....+.+|+.+.|.|.+ .|. | ...|+|+++|..+.... .......++ .
T Consensus 283 ~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v--~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~ 360 (512)
T 1zvo_C 283 RETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFV--VGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQH 360 (512)
T ss_pred cCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEE--eceECCCeEEEEEECCEeccCceeccceecCCCCeEEEE
Confidence 000000 00112344 3444444567789999999999 454 4 35999999999876221 111111222 2
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeE
Q psy2145 373 VALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFT 452 (808)
Q Consensus 373 ~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 452 (808)
+.|.|..+..+|.|.|+|.|.|..+... ...+.......
T Consensus 361 s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~---------------------------------------- 399 (512)
T 1zvo_C 361 SRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQ---------------------------------------- 399 (512)
T ss_pred EEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCC----------------------------------------
Confidence 4699999999999999999999877543 22222110000
Q ss_pred EecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceE-EEEEEeeC
Q psy2145 453 VQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAH-FSCRLIPV 531 (808)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~-l~C~v~~~ 531 (808)
...+|.+...... . +|+.+. |.|.+ .
T Consensus 400 -----------------------------------------------~~~~p~v~~~~~~---~-~~~~~~~L~C~~--~ 426 (512)
T 1zvo_C 400 -----------------------------------------------APVKLSLNLLASS---D-PPEAASWLLCEV--S 426 (512)
T ss_pred -----------------------------------------------CCCCCEEEEEccC---c-CCCCceEEEEEE--e
Confidence 0012222211111 1 688999 99999 6
Q ss_pred CC-CC-cEEEEEECCEecCCCCCe----EEEeeCc-E---EEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEE
Q psy2145 532 GD-PT-LKVEWFRNEKPLEDSSRI----TTKHDFG-Y---VAMDLSHVRAEDEGIYICKATNALGEAVTTASMKI 596 (808)
Q Consensus 532 g~-P~-~~v~W~k~g~~l~~~~~~----~~~~~~~-~---~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V 596 (808)
|. |. ..|+|+|||+++...... ....++. + ..|.|.....+|.|.|+|.|.|............+
T Consensus 427 g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~ 501 (512)
T 1zvo_C 427 GFSPPNILLMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSL 501 (512)
T ss_pred eeCCCCcEEEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEE
Confidence 64 43 468999999999764311 1122222 2 35888888888899999999998765444444333
No 74
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.98 E-value=1.1e-30 Score=267.75 Aligned_cols=251 Identities=18% Similarity=0.267 Sum_probs=192.6
Q ss_pred CeeccCCCceEeecCCeEEEEEEEeecCCCcc-EEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEc
Q psy2145 316 PVFTQPMRDIHVAENQAAHFEARLIPVGDSKL-KVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVN 394 (808)
Q Consensus 316 p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n 394 (808)
|.|...+....+.+|+.+.|.|.+ .+.|.+ .++|+++|..+.... . .|.|.++..+|+|.|+|.|.|
T Consensus 2 P~i~~~p~~~~v~~G~~v~l~C~~--~~~~~~~~~~W~~~g~~~~~~~--------~--~l~i~~~~~~d~G~Y~C~~~~ 69 (262)
T 3rjd_A 2 AVITLQPPWVSVFQEETVTLHCEV--LHLPGSSSTQWFLNGTATQTST--------P--SYRITSASVNDSGEYRCQRGL 69 (262)
T ss_dssp CEEEESSCCSEEETTCCEEEEEEC--SSCCCTTCEEEEETTEECSCCS--------S--EEEESSCCGGGCEEEEEEESS
T ss_pred CeEecCCCcEEeeCCCeEEEEEEC--CCCCCCceEEEEECCEEeeccC--------C--eEEEecCCcccCeEEEEEEec
Confidence 567777777889999999999998 677777 999999999986542 2 699999999999999999998
Q ss_pred CCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccC
Q psy2145 395 ELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQH 474 (808)
Q Consensus 395 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (808)
..++. .+.|.|...+
T Consensus 70 ~~~s~--~~~l~v~~~~--------------------------------------------------------------- 84 (262)
T 3rjd_A 70 SGRSD--PIQLEIHRGW--------------------------------------------------------------- 84 (262)
T ss_dssp SCCCC--CEEEEEECSS---------------------------------------------------------------
T ss_pred CCccc--cEEEEEeccc---------------------------------------------------------------
Confidence 76654 4556665321
Q ss_pred CchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeE
Q psy2145 475 PKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRIT 554 (808)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~ 554 (808)
....+ ... .+.+|+.+.|.|.+. .+.|.+.+.|+|+|..+...
T Consensus 85 ------------------------------~~~~~-~~~-~~~~g~~v~l~C~~~-~~~p~~~v~W~~~g~~~~~~---- 127 (262)
T 3rjd_A 85 ------------------------------LLLQV-SSR-VFTEGEPLALRCHAW-KDKLVYNVLYYRNGKAFKFF---- 127 (262)
T ss_dssp ------------------------------EEEEE-SCS-EEETTSCEEEEEEEG-GGCCCEEEEEEETTEEEEEE----
T ss_pred ------------------------------eEecC-CCe-EEecCCeEEEEEEcc-CCCCCceEEEEECCcccccc----
Confidence 01111 111 467899999999984 57888999999999987421
Q ss_pred EEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccC
Q psy2145 555 TKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYE 634 (808)
Q Consensus 555 ~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~ 634 (808)
...+ .|.|.+++.+|+|.|+|.|.|..|..+..+.|.|.....
T Consensus 128 --~~~~--~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~--------------------------------- 170 (262)
T 3rjd_A 128 --HWNS--NLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFP--------------------------------- 170 (262)
T ss_dssp --EECC--CEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSC---------------------------------
T ss_pred --CCCC--eEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCC---------------------------------
Confidence 1122 699999999999999999999999888888998886321
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCC-e----EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPT-M----RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVY 709 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~-p----~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 709 (808)
+|.+.... ...+.+|+.+.|.|.+ .|.|. | .+.|+++|..+... .....|.|.++..+|+|.|
T Consensus 171 ~p~~~~~~--~~~~~~g~~~~l~C~~--~~~p~~p~~~~~~~w~~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y 238 (262)
T 3rjd_A 171 APVLNASV--TSPLLEGNLVTLSCET--KLLLQRPGLQLYFSFYMGSKTLRGR--------NTSSEYQILTARREDSGLY 238 (262)
T ss_dssp CCEEEESS--CSSEETTCCEEEEEEC--CCCCC-----EEEEEEETTEEEEEE--------ESCCEEEESSCCGGGCEEE
T ss_pred CCeEeecC--ceeecCCCeEEEEeEc--ccCCCCCCccEEEEEEeCCcEeccc--------CCCceEEEEEechhhCeEE
Confidence 24444433 3468899999999999 78875 5 37899999987632 2334899999999999999
Q ss_pred EEEEEeCCcceEE---EEEEEEE
Q psy2145 710 MCKAINRAGEAVS---STSLKVK 729 (808)
Q Consensus 710 ~C~A~N~~G~~~~---s~~l~V~ 729 (808)
+|.|.|..|.... .+.|.|+
T Consensus 239 ~C~a~n~~G~~~~~s~~~~l~V~ 261 (262)
T 3rjd_A 239 WCEAATEDGNVLKRSPELELQVL 261 (262)
T ss_dssp EEEEEETTSSCEEECCCEEECEE
T ss_pred EEEEEcccCceEEecCCeEEEEe
Confidence 9999999997532 3445443
No 75
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.98 E-value=2e-29 Score=274.77 Aligned_cols=368 Identities=17% Similarity=0.159 Sum_probs=254.0
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEccC-----CCceEEEecCceEEEEEccCCCCCcEE
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPIKS-----GSRFTETNNFGFVALDIMQCLPEDSGV 255 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l~~-----~~~~~~~~~~~~~~L~I~~~~~~D~G~ 255 (808)
+|.|.. +.+..+.+|+++.|.|.+ .+.|.+.|.|+|+ |..+.. ..++.+..+.+..+|.|.+++.+|+|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~--~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~ 77 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDA--EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGR 77 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEE--ECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEe--ecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEE
Confidence 466765 667788899999999999 5889999999999 998865 456777666667799999999999999
Q ss_pred EEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEE
Q psy2145 256 YTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHF 335 (808)
Q Consensus 256 Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l 335 (808)
|+|.|.|..|....++.|.|.. +|.+...+....+.+|+.+.|
T Consensus 78 Y~C~a~n~~g~~~~~~~l~V~~-------------------------------------~P~~~~~~~~~~~~~g~~~~l 120 (389)
T 2jll_A 78 YDCEAASRIGGHQKSMYLDIEY-------------------------------------APKFISNQTIYYSWEGNPINI 120 (389)
T ss_dssp EEEEEECSSCEEEEEEEEEEEE-------------------------------------EEEECCSCCEEEECTTCCEEE
T ss_pred EEEEEEeCCCCcceEEEEEEEe-------------------------------------CCEEecCcceEEeccCCEEEE
Confidence 9999999999998899999875 455555555557889999999
Q ss_pred EEEEeecCCCccEEEEEECCEeccCCC--cEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEecccc
Q psy2145 336 EARLIPVGDSKLKVTWLRNGVPIQASN--RVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESKASL 413 (808)
Q Consensus 336 ~C~~~~~g~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~ 413 (808)
.|.+ .|.|.+.|.|+++|..+.... ++.+..++....|.|.++..+|+|.|+|.|.|..|....++.+.|...|..
T Consensus 121 ~C~~--~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~ 198 (389)
T 2jll_A 121 SCDV--KSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSS 198 (389)
T ss_dssp EECE--EEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCCCC
T ss_pred EEEE--EecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCCCC
Confidence 9999 788999999999999998754 677776666778999999999999999999999999888777777543311
Q ss_pred cccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCC
Q psy2145 414 QLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRP 493 (808)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (808)
|.
T Consensus 199 -----------------------------------P~------------------------------------------- 200 (389)
T 2jll_A 199 -----------------------------------PY------------------------------------------- 200 (389)
T ss_dssp -----------------------------------CE-------------------------------------------
T ss_pred -----------------------------------Cc-------------------------------------------
Confidence 10
Q ss_pred CcCCCCccCCCeeeecCCCcccccCCCceEEEEEEe--eCCCCCc--EEEEEECCEecCCCCCeEEEeeCcEEEEEECCC
Q psy2145 494 EVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLI--PVGDPTL--KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHV 569 (808)
Q Consensus 494 ~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~--~~g~P~~--~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v 569 (808)
.... ....+..+.|.|..- ..|.|.. .+.|++++... ............|.|.++
T Consensus 201 ------------~~~~-----~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~----~~~~~~~~~~~~~~i~~l 259 (389)
T 2jll_A 201 ------------GVKI-----IELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI----WKIVRSHGVQTMVVLNNL 259 (389)
T ss_dssp ------------EEEE-----EEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC----CEEEECSTTCSEEEECSC
T ss_pred ------------ceEE-----eeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc----cEEeeccCCcceEEECCc
Confidence 0000 112356788888641 0233433 57888876522 112222222337999999
Q ss_pred CCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 570 RAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
...|.|.|+|.|.|..|....+..+.+...+.. ...+|.+... ..
T Consensus 260 ~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~-----------------------------~p~~p~~~~~------~~ 304 (389)
T 2jll_A 260 EPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVR-----------------------------EPSPPSIHGQ------PS 304 (389)
T ss_dssp CTTCEEEEEEEEEESSCBCCCCCCEEEECCCCC-----------------------------CCCCCCEEEE------EE
T ss_pred cCCCEEEEEEEEEcCCccCCCCcceEEEecCCC-----------------------------CCCCCccccc------cC
Confidence 999999999999999997765555544432110 0012433221 12
Q ss_pred CCceEEEEEEEeeC-CCCCeEE--EEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 650 EGQSAHYDCRVVPV-GDPTMRF--EWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 650 ~G~~v~l~C~v~~~-g~P~p~i--~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
.+..+.|.+..-.. |.|...+ .|...+..-. ............+.|.++.+.-...|++.|.|..|....+. +
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~ 380 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQ---WLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV-Y 380 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----C---CBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-E
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcc---eeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-e
Confidence 46678888864111 1222233 3332121100 00111123334688999999999999999999999765553 3
Q ss_pred EEEe
Q psy2145 727 KVKS 730 (808)
Q Consensus 727 ~V~~ 730 (808)
.+..
T Consensus 381 ~~~T 384 (389)
T 2jll_A 381 EFSM 384 (389)
T ss_dssp EEEC
T ss_pred EecC
Confidence 4443
No 76
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.98 E-value=1e-31 Score=288.28 Aligned_cols=279 Identities=18% Similarity=0.239 Sum_probs=175.8
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCC-----------CceEEEEeCCE------Eee---ccCcEEEEeeCCeEEEEEcc
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDS-----------NLKVEWFKNGR------PVT---IGHRFRPIHDFGYVALDIID 114 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p-----------~~~v~W~~~g~------~l~---~~~r~~~~~~~~~~~L~I~~ 114 (808)
.+.++ .+.+|+.+.|.|.+.+ .| .+.|.|+|+|. .+. .+.++ ...++ +|.|.+
T Consensus 13 ~~~~v-~v~~G~~v~L~C~~~~--~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~--~~~~~--~L~i~~ 85 (349)
T 4dep_C 13 TMRQI-QVFEDEPARIKCPLFE--HFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRI--SKEKD--VLWFRP 85 (349)
T ss_dssp CCCCC-EEETTSCEEEECTCCC--CCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCE--EEETT--EEEESS
T ss_pred eeeeE-EEecCCeEEEEccccc--cccccccccccCCCceEEEEECCCCCcccccccccccCceE--eecCC--EEEEcc
Confidence 34556 8999999999999984 44 48999999884 222 22333 23333 799999
Q ss_pred cCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCcee
Q psy2145 115 TIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCE 194 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 194 (808)
++.+|+|.|+|.|.|..|....++.|.|...+... ++ ....+....
T Consensus 86 ~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~---------------------------------~~-~~~~~~~~~ 131 (349)
T 4dep_C 86 TLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCF---------------------------------NS-PMKLPVHKL 131 (349)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTS---------------------------------CC-SCCCCEEEE
T ss_pred CChhhCEEEEEEEecCCceEEEEEEEEEecCCccc---------------------------------Cc-ccccCccee
Confidence 99999999999999999988888999997543211 11 112234557
Q ss_pred ecCCCeEEEEEEEee---cCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCc-eeE---
Q psy2145 195 IKEGQRAHFECRLIP---VSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNAL-GQA--- 267 (808)
Q Consensus 195 v~~G~~v~L~C~~~~---~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~-g~~--- 267 (808)
+.+|+.+.|.|.+.. .+.|.+.|.|+|||.++....++.... . .|.|.+++.+|+|.|+|.|.|.. |..
T Consensus 132 ~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~~~~~~--~--~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~ 207 (349)
T 4dep_C 132 YIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEG--M--NLSFLIALISNNGNYTCVVTYPENGRTFHL 207 (349)
T ss_dssp ETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSSEEEET--T--EEEEESCCGGGCEEEEEEEEEEETTEEEEE
T ss_pred eecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccceeecC--C--EEEEeeeeecCCcEEEEEEEEeeCCEEEEE
Confidence 889999999997410 368899999999999997655444332 2 79999999999999999999976 544
Q ss_pred EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCce--EeecCCeEEEEEEEeec--C
Q psy2145 268 VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDI--HVAENQAAHFEARLIPV--G 343 (808)
Q Consensus 268 ~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~--~v~~G~~~~l~C~~~~~--g 343 (808)
...+.|.|..++. ...+|.+..+.... .+.+|+.+.|.|.+... |
T Consensus 208 ~~~~~l~v~~~~~-------------------------------~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g 256 (349)
T 4dep_C 208 TRTLTVKVVGSPK-------------------------------NAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLM 256 (349)
T ss_dssp EEEEEEEEECCGG-------------------------------GCCSCEEC----------------CCCEEEEECCCT
T ss_pred EEEEEEEEEccCC-------------------------------CCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCC
Confidence 4556666654221 11256666655443 78899999999999322 6
Q ss_pred CCccEEEEEECCEeccC-CCcEEEEe-------e--CcEEEEEEccCCCCCC-eEEEEEEEcCCcceEEEEEEEEEe
Q psy2145 344 DSKLKVTWLRNGVPIQA-SNRVSTMH-------D--FGYVALNFKYTYPEDS-GTYTCRAVNELGEAVTSSTLFVES 409 (808)
Q Consensus 344 ~p~~~v~W~~~g~~l~~-~~~~~~~~-------~--~~~~~L~I~~v~~~d~-G~Y~C~a~n~~g~~~~~~~l~V~~ 409 (808)
.|.+.|.|+++|..+.. ..++.+.. + ....+|.|.++..+|+ |.|+|.|.|..|....++.|.|..
T Consensus 257 ~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 333 (349)
T 4dep_C 257 DSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333 (349)
T ss_dssp TCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-----
T ss_pred CCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEEeeec
Confidence 78999999999998876 22222210 1 1234599999999999 999999999999999998888865
No 77
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.98 E-value=5.3e-31 Score=280.38 Aligned_cols=275 Identities=16% Similarity=0.217 Sum_probs=198.4
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecCC----CccEEEEEECC--Ee-------------c--cCCCcEEEEe-eCcE
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVGD----SKLKVTWLRNG--VP-------------I--QASNRVSTMH-DFGY 372 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~----p~~~v~W~~~g--~~-------------l--~~~~~~~~~~-~~~~ 372 (808)
++.+...+..+.+.+|+.+.|.|.+ .+. +.+.|.|++++ .. + ....|+.+.. ..+.
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 91 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSF--ANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTD 91 (331)
T ss_dssp -------CEEEEEETTCCEEECCBC--SSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSB
T ss_pred CcceEEcCCcEEEEecCCEEEeeec--CCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCC
Confidence 3445566667889999999999998 555 56789999954 11 1 1234555431 1223
Q ss_pred EEEEEccCCCCCCeEEEEE-EEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCee
Q psy2145 373 VALNFKYTYPEDSGTYTCR-AVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSF 451 (808)
Q Consensus 373 ~~L~I~~v~~~d~G~Y~C~-a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 451 (808)
.+|.|.++..+|+|.|+|. +.|..|.....+.|.|..+|.+..
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~------------------------------------ 135 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWI------------------------------------ 135 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEE------------------------------------
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCccee------------------------------------
Confidence 4799999999999999998 666678777788888876543210
Q ss_pred EEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCC---CceEEEEE-
Q psy2145 452 TVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEG---KNAHFSCR- 527 (808)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G---~~v~l~C~- 527 (808)
...... ..+.+| +.+.|.|.
T Consensus 136 -------------------------------------------------------~~~~~~-~~~~~g~~~~~~~l~C~~ 159 (331)
T 3u83_A 136 -------------------------------------------------------EGTQAV-LRAKKGQDDKVLVATCTS 159 (331)
T ss_dssp -------------------------------------------------------EECSSC-EEECTTCCCCEEEEEEEE
T ss_pred -------------------------------------------------------ecCCCc-eeecCCCccceEEEEEEe
Confidence 001111 146677 78999998
Q ss_pred EeeCCCCCcEEEEEECCEecC-------CCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecc
Q psy2145 528 LIPVGDPTLKVEWFRNEKPLE-------DSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 528 v~~~g~P~~~v~W~k~g~~l~-------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~ 600 (808)
+ .+.|.+.++|+|++.... ....+.+. ..|.|.++..+|+|.|+|.|.|..|..+.++.|.|...|
T Consensus 160 ~--~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~-----~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P 232 (331)
T 3u83_A 160 A--NGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVI-----SRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEP 232 (331)
T ss_dssp E--EEBSCCEEEEEESSCCEEEEEEEECTTSCEEEE-----EEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEE
T ss_pred c--CCcCCceEEEEcCCCCccccceeECCCCcEEEE-----EEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCC
Confidence 5 789999999999632211 11222211 269999999999999999999999999999999987653
Q ss_pred cccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeE-EEEEECCEEc
Q psy2145 601 GLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMR-FEWFVNGVEL 679 (808)
Q Consensus 601 ~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~-i~W~~~g~~l 679 (808)
.+.........+.+|+.+.|.|.+ .|.|.|. |.|+++|..+
T Consensus 233 ------------------------------------~~~~~~~~~~~~~~g~~~~l~C~~--~g~p~p~~i~W~~~~~~~ 274 (331)
T 3u83_A 233 ------------------------------------EVTIEGFDGNWYLQRMDVKLTCKA--DANPPATEYHWTTLNGSL 274 (331)
T ss_dssp ------------------------------------EEEEECCCSCCBTTCCCEEEEEEE--EEESCCCEEEEEETTBSC
T ss_pred ------------------------------------eEEEecCCCceEeCCCeEEEEEeC--cCCCCCCEEEEEECCCcc
Confidence 333333334568899999999999 7999998 9999999988
Q ss_pred cCCCcEEEEEeCCEEEEEEc-cCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCc
Q psy2145 680 KMGSRFHVQHDFGYVTLDIT-KCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 680 ~~~~~~~~~~~~~~~~L~I~-~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
..+.. + .++ +|.|. ++..+|+|.|+|.|.|.+|..+.++.|.|..++.-
T Consensus 275 ~~~~~--~--~~~--~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~~ 324 (331)
T 3u83_A 275 PKGVE--A--QNR--TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAAL 324 (331)
T ss_dssp CTTEE--E--ETT--EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC----
T ss_pred cccce--e--cCc--EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccchh
Confidence 65422 2 233 79999 99999999999999999999999999999887653
No 78
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.97 E-value=2.9e-32 Score=287.92 Aligned_cols=272 Identities=17% Similarity=0.250 Sum_probs=202.7
Q ss_pred CCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee----ccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCc
Q psy2145 57 KSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT----IGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVG 132 (808)
Q Consensus 57 ~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~----~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 132 (808)
..+ .+.+|+.+.|.|.+.+ ..+.+.|.|+|+|..+. .+.|+... ++ +|.|.+++.+|+|.|+|.|.|..|
T Consensus 13 ~~~-~v~~G~~v~L~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~D~G~Y~C~a~n~~g 86 (315)
T 1itb_B 13 IIL-VSSANEIDVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQASRIHQH--KE--KLWFVPAKVEDSGHYYCVVRNSSY 86 (315)
T ss_dssp CCC-EEETTSCCCCBCCCCS-CCCSSCCCEECTTSCSCSCCCTTSSSEEC--SS--BEECTTCCGGGCSCCEECCCSSSC
T ss_pred eEE-EEcCCCcEEEEeeccC-cCCCceEEEEeCCCcCccccccCCcEecc--CC--eEEECCCChhhCEEEEEEEeCCce
Confidence 344 8999999999999985 23377999999986532 23444432 22 699999999999999999999988
Q ss_pred ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec---CceeecCCCeEEEEEEEe-
Q psy2145 133 FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL---KNCEIKEGQRAHFECRLI- 208 (808)
Q Consensus 133 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~---~~~~v~~G~~v~L~C~~~- 208 (808)
.....+.+.|... +|.+...+ ....+.+|+++.|.|.+.
T Consensus 87 ~~~~~~~v~v~~~-------------------------------------~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~ 129 (315)
T 1itb_B 87 CLRIKISAKFVEN-------------------------------------EPNLCYNAQAIFKQKLPVAGDGGLVCPYME 129 (315)
T ss_dssp CCCEECCCEEECC-------------------------------------CTTSSSCGGGEEEEEEETTSCEEEECSSCT
T ss_pred EEEEEEEEEEeCC-------------------------------------CCCcccccccccceEEecCCCeEEEEeccc
Confidence 8777666665432 22222121 235688999999999871
Q ss_pred ---ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEE-eCceeEE---EEEEEEEeeCCcc
Q psy2145 209 ---PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAV-NALGQAV---TSGNLLVHSKKSI 281 (808)
Q Consensus 209 ---~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-n~~g~~~---~~~~l~V~~~~~i 281 (808)
..+.|.+.+.|+|+|.++..+....... ++ .|.|.+++.+|+|.|+|.|. |..|... ....+.+....
T Consensus 130 ~~~~~g~p~~~i~W~k~~~~l~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~-- 204 (315)
T 1itb_B 130 FFKNENNELPKLQWYKDCKPLLLDNIHFSGV-KD--RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN-- 204 (315)
T ss_dssp TTCTTTTCCCCCEEEETTEECCCCSSSEEEE-TT--EEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC--
T ss_pred ccccCCCCCCEEEEEECCEECCCccceEeec-Cc--eEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC--
Confidence 1378889999999999996543322222 23 89999999999999999999 7878763 33344333211
Q ss_pred cccccccchhhhhhhhhccccccccccccccCCCCeeccCCCc-eEeecCCeEEEEEEEeecCCCccEEEEEECCEeccC
Q psy2145 282 QTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRD-IHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQA 360 (808)
Q Consensus 282 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~-~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~ 360 (808)
...+|.+..++.. ..+.+|+.+.|.|.+ .|.|.+.|.|++||..+..
T Consensus 205 ------------------------------~~~~P~~~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~i~W~~~g~~i~~ 252 (315)
T 1itb_B 205 ------------------------------KPTRPVIVSPANETMEVDLGSQIQLICNV--TGQLSDIAYWKWNGSVIDE 252 (315)
T ss_dssp ------------------------------CCCCCEECSCCSEEEECCSSSCEEEEEEE--EECTTSEEEEEETTEECCT
T ss_pred ------------------------------CCCCCEEecCCCCcEEEeCCCcEEEEEEE--ecCCCCeeEEEECCEECCc
Confidence 1247777766654 578999999999999 7899999999999999987
Q ss_pred CCcEEE-----Eee-------CcEEEEEEccCCCCC-CeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 361 SNRVST-----MHD-------FGYVALNFKYTYPED-SGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 361 ~~~~~~-----~~~-------~~~~~L~I~~v~~~d-~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
+.+... ... .....|.|.++..+| +|.|+|.|.|..|....++.|.|.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 253 DDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp TCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred ccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 653211 111 123489999999999 999999999999999998888875
No 79
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.97 E-value=3.9e-32 Score=285.93 Aligned_cols=272 Identities=16% Similarity=0.178 Sum_probs=193.2
Q ss_pred ceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccC-----------------CCceEEEe-cCceEEEEEccCCCCCc
Q psy2145 192 NCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKS-----------------GSRFTETN-NFGFVALDIMQCLPEDS 253 (808)
Q Consensus 192 ~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~-----------------~~~~~~~~-~~~~~~L~I~~~~~~D~ 253 (808)
++.+.+|++++|.|.+. .+.+.+.|+|+|++..... ..++.... ..+..+|.|.+++.+|+
T Consensus 8 ~vtv~~G~~v~L~C~v~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~ 86 (308)
T 4fom_A 8 HVTAVWGKNVSLKCLIE-VNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDS 86 (308)
T ss_dssp SCEEETTSCEEECCBCC-CSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGC
T ss_pred EeEEEcCCcEEEEEEec-CCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHC
Confidence 56788999999999985 2556678999996532210 11222211 12334799999999999
Q ss_pred EEEEEEEEeC-ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCe
Q psy2145 254 GVYTCRAVNA-LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~-~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|. .|.....+.+.+...+. +.+...+.......|+.
T Consensus 87 G~Y~C~a~n~~~~~~~~~~~~~v~~~~~-----------------------------------~~~~~~~~~~~~~~~~~ 131 (308)
T 4fom_A 87 GKYICKAVTFPLGNAQSSTTVTVLVEPT-----------------------------------VSLIKGPDSLIDGGNET 131 (308)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEBCCE-----------------------------------EEEEECSSCCCTTCSCE
T ss_pred EEEEEEEeeCCCcceeeeeEEEeeeccc-----------------------------------cccccccceeEEcCCce
Confidence 9999999985 66777777777765331 12222333444567899
Q ss_pred EEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEe-eCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE--EEEEEEe
Q psy2145 333 AHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMH-DFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS--STLFVES 409 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~--~~l~V~~ 409 (808)
+.|.|.+. .|.|.+.|+|+++|.++.......... ......|.|..+..+|+|.|+|.|.|..|....+ +.|.|..
T Consensus 132 ~~l~C~~~-~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~ 210 (308)
T 4fom_A 132 VAAICIAA-TGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY 210 (308)
T ss_dssp EEEEEEEE-EEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE
T ss_pred EEEEEEec-CCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec
Confidence 99999863 689999999999998875432111000 1122469999999999999999999988765444 4444443
Q ss_pred cccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCC
Q psy2145 410 KASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEP 489 (808)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (808)
+|
T Consensus 211 ~P------------------------------------------------------------------------------ 212 (308)
T 4fom_A 211 AP------------------------------------------------------------------------------ 212 (308)
T ss_dssp EE------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 32
Q ss_pred CCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCc-EEEEEECCEecCCCCCeEEEeeCcEEEEEECC
Q psy2145 490 HKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTL-KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSH 568 (808)
Q Consensus 490 ~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~-~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~ 568 (808)
.+.....+...+.+|+.+.|.|.+ .|.|.| .+.|+|+|..+..+... . +...|.|.+
T Consensus 213 ---------------~~~~~~~~~~~~~~g~~v~l~C~~--~g~P~p~~v~W~k~~~~~~~~~~~----~-~~~~l~i~~ 270 (308)
T 4fom_A 213 ---------------EVSVTGYDGNWFVGRKGVNLKCNA--DANPPPFKSVWSRLDGQWPDGLLA----S-DNTLHFVHP 270 (308)
T ss_dssp ---------------EECCBCCCSCEETTCCSCEEECCE--EEESCEEEEECCBSSSCCCSSCBC----S-TTEEECCSC
T ss_pred ---------------eeEEcccceeeeeccccEEEEEEE--ecCCCCcEEEEEECCeECCCcEEE----c-CCeEEEECC
Confidence 222222222246789999999999 789988 69999999988754321 1 223678999
Q ss_pred CCCCCCEEEEEEEEeCCeeEEEEEEEEEEecc
Q psy2145 569 VRAEDEGIYICKATNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~ 600 (808)
++.+|+|.|+|.|.|..|..++++.|.|..+|
T Consensus 271 v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 271 LTFNYSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp CCSCCCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred CChhhCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 99999999999999999999999999998765
No 80
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=279.17 Aligned_cols=275 Identities=19% Similarity=0.278 Sum_probs=183.1
Q ss_pred CeeccCCCceEeecCCeEEEEEEEeecCC-CccEEEEEECCEecc---------CCCcEEEEee-----CcEEEEEEccC
Q psy2145 316 PVFTQPMRDIHVAENQAAHFEARLIPVGD-SKLKVTWLRNGVPIQ---------ASNRVSTMHD-----FGYVALNFKYT 380 (808)
Q Consensus 316 p~~~~~~~~~~v~~G~~~~l~C~~~~~g~-p~~~v~W~~~g~~l~---------~~~~~~~~~~-----~~~~~L~I~~v 380 (808)
..|+.++..+.+.+|+.+.|.|.+ .+. |.+.|+|+|+|.++. ...++....+ .+..+|.|.++
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~--~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTV--TSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEE--SCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred eEEEcCCCceEEecCCcEEEEEEc--cCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 356677788899999999999999 676 888999999986432 1124443322 33447999999
Q ss_pred CCCCCeEEEEEEEcCCcceE-----EEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEec
Q psy2145 381 YPEDSGTYTCRAVNELGEAV-----TSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQL 455 (808)
Q Consensus 381 ~~~d~G~Y~C~a~n~~g~~~-----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 455 (808)
..+|+|.|+|.|.|..|... ..+.|.|...+.
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~------------------------------------------- 118 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPS------------------------------------------- 118 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCC-------------------------------------------
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCC-------------------------------------------
Confidence 99999999999999876421 235666664321
Q ss_pred CCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC
Q psy2145 456 NGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT 535 (808)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~ 535 (808)
+|.+..+ . ..+.+|+.+.|.|.+ .|.|+
T Consensus 119 -----------------------------------------------~p~i~~~--~-~~~~~g~~~~l~C~~--~g~p~ 146 (327)
T 2wng_A 119 -----------------------------------------------APVVSGP--A-ARATPQHTVSFTCES--HGFSP 146 (327)
T ss_dssp -----------------------------------------------CCEEECC--S-SCBCTTCEEEEEEEE--EEEBS
T ss_pred -----------------------------------------------Cceeecc--c-cccCCCCEEEEEEEE--eCccC
Confidence 1222211 1 257889999999999 56665
Q ss_pred c--EEEEEECCEecCCCCCeEEEe-eCc----EEEEEECCCCCCCCEEEEEEEEeCCeeE---EEEEEEEEEeccccccc
Q psy2145 536 L--KVEWFRNEKPLEDSSRITTKH-DFG----YVAMDLSHVRAEDEGIYICKATNALGEA---VTTASMKIKTKAGLQLE 605 (808)
Q Consensus 536 ~--~v~W~k~g~~l~~~~~~~~~~-~~~----~~~L~I~~v~~~D~G~Y~C~a~N~~G~~---~~s~~l~V~~~~~i~~~ 605 (808)
+ .|+|+|||+.+..+....... .++ ...|.|.....+|.|.|+|.|.|..|.. ..++.+.+..
T Consensus 147 ~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v------- 219 (327)
T 2wng_A 147 RDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETI------- 219 (327)
T ss_dssp SCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTB-------
T ss_pred CCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEecccc-------
Confidence 5 899999999987543211111 111 1258888888788999999999998763 2333332111
Q ss_pred ccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCC
Q psy2145 606 TQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGS 683 (808)
Q Consensus 606 ~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~ 683 (808)
..+|.+...... +.+|+.+.|.|.+ .|. |++ .|.|+|||+++..+.
T Consensus 220 ---------------------------~~~P~i~~~~~~---~~~G~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~ 267 (327)
T 2wng_A 220 ---------------------------RVPPTLEVTQQP---VRAENQVNVTCQV--RKFYPQRLQLTWLENGNVSRTET 267 (327)
T ss_dssp ---------------------------CBCCEEEEEEEC---CSSTTCCEEEEEE--EEEBSSCEEEEEEETTEEEEEEE
T ss_pred ---------------------------CCCCEEEEecCC---cCCCCcEEEEEEE--ccccCCCcEEEEEECCeEccCcc
Confidence 134666655432 7899999999999 674 443 899999999987532
Q ss_pred cEEEEEe-CC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 684 RFHVQHD-FG----YVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 684 ~~~~~~~-~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
...+... ++ .+.|.|..+..+|+|.|+|.|.|..|...+...+
T Consensus 268 ~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~ 315 (327)
T 2wng_A 268 ASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHD 315 (327)
T ss_dssp CCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEE
T ss_pred cCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheE
Confidence 2222221 22 1579999999999999999999999976554433
No 81
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=278.11 Aligned_cols=274 Identities=18% Similarity=0.243 Sum_probs=201.5
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
.+|.|...+....+.+|+.+.|.|.+ .+. |.|++++.. +.....++...+|.|.++..+|+|.|+|.|.
T Consensus 3 ~~P~i~~~~~~~~v~~G~~v~L~C~~--~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 71 (292)
T 4dkd_C 3 SIPVIEPSVPELVVKPGATVTLRCVG--NGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTEP 71 (292)
T ss_dssp -CCEEESCCSSCEECTTCCEEEEEEC--SSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECCC
T ss_pred CCceecCCCCeEEEcCCCcEEEEEcC--CCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEEc
Confidence 47888888888899999999999998 553 999976542 2333444556689999999999999999999
Q ss_pred cCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEeccc
Q psy2145 394 NELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQ 473 (808)
Q Consensus 394 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 473 (808)
|..|.....+.|.|..++..
T Consensus 72 n~~~~~~~~~~l~V~~~~~~------------------------------------------------------------ 91 (292)
T 4dkd_C 72 GDPLGGSAAIHLYVKDPARP------------------------------------------------------------ 91 (292)
T ss_dssp C----CCEEECCEECCSSCC------------------------------------------------------------
T ss_pred cCCCCcceEEEEEEcCcccc------------------------------------------------------------
Confidence 98888877777877654321
Q ss_pred CCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC--cEEEEEEC-CEecCCC
Q psy2145 474 HPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT--LKVEWFRN-EKPLEDS 550 (808)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~--~~v~W~k~-g~~l~~~ 550 (808)
|.....+. .+.+|+.+.|.|.+ .+ |. +.+.|+++ +..+...
T Consensus 92 --------------------------------~~~~~~~~-~v~~g~~v~l~C~~--~~-~~~~~~v~W~~~~~~~~~~~ 135 (292)
T 4dkd_C 92 --------------------------------WNVLAQEV-VVFEDQDALLPCLL--TD-PVLEAGVSLVRVRGRPLMRH 135 (292)
T ss_dssp --------------------------------EEESCSEE-EEETTSCEECCEEE--SS-GGGGSSEEEEEGGGCCCCSS
T ss_pred --------------------------------ccccCCeE-EEcCCCcEEEeeeC--CC-CCcceeEEEEecCCCccccC
Confidence 11111122 57899999999999 55 54 77999997 6777666
Q ss_pred CCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCC
Q psy2145 551 SRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEP 629 (808)
Q Consensus 551 ~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~ 629 (808)
.++.....+ .|.|.++..+|+|.|+|.|.|..|.... .+.|.|.....
T Consensus 136 ~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~---------------------------- 184 (292)
T 4dkd_C 136 TNYSFSPWH---GFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP---------------------------- 184 (292)
T ss_dssp CCEECCSSS---CCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC----------------------------
T ss_pred CcccccCCc---eEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC----------------------------
Confidence 666554443 3999999999999999999999886644 67888875211
Q ss_pred ccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCC-CeEEEEEECCEEccCCCcEEEEE--eCCEEEEEEccCCCCCc
Q psy2145 630 ERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDP-TMRFEWFVNGVELKMGSRFHVQH--DFGYVTLDITKCVPADS 706 (808)
Q Consensus 630 ~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~p~i~W~~~g~~l~~~~~~~~~~--~~~~~~L~I~~v~~~D~ 706 (808)
.+|.+...+.. ..+.+|+.+.|.|.+ .|.| .+.+.|+++|..+.......+.. .....+|.|.++..+|+
T Consensus 185 ----~~p~i~~~~~~-~~~~~g~~v~l~C~~--~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~ 257 (292)
T 4dkd_C 185 ----GPPALTLVPAE-LVRIRGEAAQIVCSA--SSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHA 257 (292)
T ss_dssp ----SSCEEEEESSC-BCCCSSSCEEEEEEE--EESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSC
T ss_pred ----CCCeEEccCCc-eeEecCCCEEEEEEe--cCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcC
Confidence 13666655543 456799999999999 4655 47899999998776544322211 11235899999999999
Q ss_pred EEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 707 GVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 707 G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
|.|+|.|.|..|..+.++.|.|.++.
T Consensus 258 G~Y~C~a~N~~g~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 258 GNYSCVASNVQGKHSTSMFFRVVESA 283 (292)
T ss_dssp EEEEEEEECSSCEEEEEEEECC----
T ss_pred eEEEEEEecCCCCceeEEEEEEeeCC
Confidence 99999999999999999999998774
No 82
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.97 E-value=7.1e-30 Score=261.73 Aligned_cols=242 Identities=16% Similarity=0.205 Sum_probs=188.9
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCCc-eEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSNL-KVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~-~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
|.+...|..+ .+.+|+.+.|.|.+.+ .|.+ .|.|+|+|..+.... .+|.|.+++.+|+|.|+|.|.
T Consensus 2 P~i~~~p~~~-~v~~G~~v~l~C~~~~--~~~~~~~~W~~~g~~~~~~~----------~~l~i~~~~~~d~G~Y~C~~~ 68 (262)
T 3rjd_A 2 AVITLQPPWV-SVFQEETVTLHCEVLH--LPGSSSTQWFLNGTATQTST----------PSYRITSASVNDSGEYRCQRG 68 (262)
T ss_dssp CEEEESSCCS-EEETTCCEEEEEECSS--CCCTTCEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEES
T ss_pred CeEecCCCcE-EeeCCCeEEEEEECCC--CCCCceEEEEECCEEeeccC----------CeEEEecCCcccCeEEEEEEe
Confidence 3456678887 8999999999999984 5655 999999999886431 269999999999999999998
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..+.. .+.|.|.. +| +...+....+.+|+.+.|.|.+.
T Consensus 69 ~~~~s~--~~~l~v~~--------------------------------------~~-~~~~~~~~~~~~g~~v~l~C~~~ 107 (262)
T 3rjd_A 69 LSGRSD--PIQLEIHR--------------------------------------GW-LLLQVSSRVFTEGEPLALRCHAW 107 (262)
T ss_dssp SSCCCC--CEEEEEEC--------------------------------------SS-EEEEESCSEEETTSCEEEEEEEG
T ss_pred cCCccc--cEEEEEec--------------------------------------cc-eEecCCCeEEecCCeEEEEEEcc
Confidence 866543 45555542 22 33445566788999999999995
Q ss_pred ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCccccccccc
Q psy2145 209 PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHG 288 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~ 288 (808)
.+.|.+.+.|+++|..+.... .. ..|.|.+++.+|+|.|+|.|.|..+.....+.|.|....
T Consensus 108 -~~~p~~~v~W~~~g~~~~~~~------~~--~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~--------- 169 (262)
T 3rjd_A 108 -KDKLVYNVLYYRNGKAFKFFH------WN--SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF--------- 169 (262)
T ss_dssp -GGCCCEEEEEEETTEEEEEEE------EC--CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSS---------
T ss_pred -CCCCCceEEEEECCccccccC------CC--CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCC---------
Confidence 367889999999999875321 11 279999999999999999999999888888888887521
Q ss_pred chhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCc-c----EEEEEECCEeccCCCc
Q psy2145 289 ESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSK-L----KVTWLRNGVPIQASNR 363 (808)
Q Consensus 289 ~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~-~----~v~W~~~g~~l~~~~~ 363 (808)
.+|.+...+ ...+.+|+.+.|.|.+ .+.|. + .+.|+++|..+...
T Consensus 170 -------------------------~~p~~~~~~-~~~~~~g~~~~l~C~~--~~~p~~p~~~~~~~w~~~~~~~~~~-- 219 (262)
T 3rjd_A 170 -------------------------PAPVLNASV-TSPLLEGNLVTLSCET--KLLLQRPGLQLYFSFYMGSKTLRGR-- 219 (262)
T ss_dssp -------------------------CCCEEEESS-CSSEETTCCEEEEEEC--CCCCC-----EEEEEEETTEEEEEE--
T ss_pred -------------------------CCCeEeecC-ceeecCCCeEEEEeEc--ccCCCCCCccEEEEEEeCCcEeccc--
Confidence 245555444 5568899999999998 67664 3 47899999877531
Q ss_pred EEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy2145 364 VSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEA 399 (808)
Q Consensus 364 ~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~ 399 (808)
.....|.|.++..+|+|.|+|.|.|..|..
T Consensus 220 ------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 220 ------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred ------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 122379999999999999999999999975
No 83
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=265.46 Aligned_cols=265 Identities=20% Similarity=0.293 Sum_probs=204.3
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCC-CcEEEEe-eCcEEEEEEccCCCCCCeEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQAS-NRVSTMH-DFGYVALNFKYTYPEDSGTYTCR 391 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~-~~~~~~~-~~~~~~L~I~~v~~~d~G~Y~C~ 391 (808)
.+|.|...+....+.+|+.+.|.|.+ .|.|.+.|.|+++|..+... .++.+.. +++..+|.|.++..+|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEE--ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEE--eCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 47899888889999999999999999 78999999999999998764 3555443 45677899999999999999999
Q ss_pred EEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEec
Q psy2145 392 AVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITD 471 (808)
Q Consensus 392 a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 471 (808)
|.|..|....++.|.|..++.+..
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~~~-------------------------------------------------------- 104 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKIHL-------------------------------------------------------- 104 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEECC--------------------------------------------------------
T ss_pred EEcCCCCccceEEEEEecCCccCC--------------------------------------------------------
Confidence 999999988888998876543221
Q ss_pred ccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC
Q psy2145 472 TQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS 551 (808)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~ 551 (808)
|.+...+... .+.+|+.+.|.|.+ .|.|.+.+.|+++|..+..+.
T Consensus 105 --------------------------------~~~~~~~~~~-~~~~g~~~~l~C~~--~g~p~p~i~W~~~~~~~~~~~ 149 (305)
T 2nzi_A 105 --------------------------------PKTLEGMGAV-HALRGEVVSIKIPF--SGKPDPVITWQKGQDLIDNNG 149 (305)
T ss_dssp --------------------------------CHHHHSSCCE-EEETTCCEEEEEEE--EEESCCEEEEEESSSBCCSSS
T ss_pred --------------------------------CccccccccE-EecCCCEEEEEEEE--CCCCCCEEEEEECCEECCCCC
Confidence 1111111122 47789999999999 799999999999999998888
Q ss_pred CeEEEeeCcEEEEEECC-CCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCc
Q psy2145 552 RITTKHDFGYVAMDLSH-VRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPE 630 (808)
Q Consensus 552 ~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~ 630 (808)
++.+........|.|.+ +..+|+|.|+|.|.|..|....++.|.|...|..
T Consensus 150 ~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~---------------------------- 201 (305)
T 2nzi_A 150 HYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDP---------------------------- 201 (305)
T ss_dssp SCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCC----------------------------
T ss_pred cEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCC----------------------------
Confidence 88877766677899999 9999999999999999999999999999876531
Q ss_pred cccCCCeEEeecCCCccccCCceEEEE--------------EEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEE
Q psy2145 631 RQYEKPIFTQLLTGTSEIMEGQSAHYD--------------CRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTL 696 (808)
Q Consensus 631 ~~~~~P~~~~~~~~~~~v~~G~~v~l~--------------C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L 696 (808)
|..... ....+..+.|. |.+ .+.|.+...|++.+... ...|
T Consensus 202 -----p~~~~~-----~~~~~~~v~l~w~~p~~~g~~~i~~y~v--~~~~~~~~~w~~~~~~~-------------~~~~ 256 (305)
T 2nzi_A 202 -----PRGVKV-----SDVSRDSVNLTWTEPASDGGSKITNYIV--EKCATTAERWLRVGQAR-------------ETRY 256 (305)
T ss_dssp -----CEEEEE-----ESCCSSCEEEEEECCSCCSBSCEEEEEE--EEEETTSCCEEEEEEES-------------SSEE
T ss_pred -----CCCcee-----eeccCCEEEEEEcCCccCCCCceeEEEE--EEecCCCCccEECcccc-------------CceE
Confidence 222111 11123444444 444 33444444555543322 2379
Q ss_pred EEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 697 DITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 697 ~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
.|.++...|.|.|+|.|.|.+|....+.
T Consensus 257 ~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 257 TVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp EECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred EecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 9999999999999999999999876554
No 84
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=1.2e-28 Score=268.43 Aligned_cols=270 Identities=19% Similarity=0.215 Sum_probs=205.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEeec-----cCcEEEEeeCCeEEEEEcccCcCCCeeEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVTI-----GHRFRPIHDFGYVALDIIDTIPEDSGTYTC 125 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~~-----~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C 125 (808)
+..|.+. .+.+|+.++|.|.+. +.|.+.|.|+|+ |..|.. +.|+.+..+.+..+|.|.+++.+|+|.|+|
T Consensus 4 i~~~~~~-~~~~G~~v~l~C~~~--g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (389)
T 2jll_A 4 IIQLKNE-TTYENGQVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDC 80 (389)
T ss_dssp EEECCCE-EEETTSEEEEEEEEE--CSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEE
T ss_pred EEecCce-EEeCCCeEEEEEEee--cccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEE
Confidence 3346666 788899999999999 578899999999 998875 567887777777899999999999999999
Q ss_pred EEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEE
Q psy2145 126 RAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFEC 205 (808)
Q Consensus 126 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C 205 (808)
.|.|..|....++.|.|.. +|.|...+....+.+|+.+.|.|
T Consensus 81 ~a~n~~g~~~~~~~l~V~~--------------------------------------~P~~~~~~~~~~~~~g~~~~l~C 122 (389)
T 2jll_A 81 EAASRIGGHQKSMYLDIEY--------------------------------------APKFISNQTIYYSWEGNPINISC 122 (389)
T ss_dssp EEECSSCEEEEEEEEEEEE--------------------------------------EEEECCSCCEEEECTTCCEEEEE
T ss_pred EEEeCCCCcceEEEEEEEe--------------------------------------CCEEecCcceEEeccCCEEEEEE
Confidence 9999999998888998853 45555555556788999999999
Q ss_pred EEeecCCCCeEEEEeeCCEEccCCC--ceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccc
Q psy2145 206 RLIPVSDNTMKVEWFHNNVPIKSGS--RFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQT 283 (808)
Q Consensus 206 ~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~ 283 (808)
.+ .+.|.+.|.|+|+|..+.... ++.+..+++..+|.|.++..+|+|.|+|.|.|..|....++.|.|...|
T Consensus 123 ~~--~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P---- 196 (389)
T 2jll_A 123 DV--KSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVP---- 196 (389)
T ss_dssp CE--EEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCC----
T ss_pred EE--EecCCCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCC----
Confidence 99 577889999999999997654 6666666666789999999999999999999999998888888775432
Q ss_pred cccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEe--ecCCCc--cEEEEEECCEecc
Q psy2145 284 ETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLI--PVGDSK--LKVTWLRNGVPIQ 359 (808)
Q Consensus 284 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~--~~g~p~--~~v~W~~~g~~l~ 359 (808)
.+|... ......+..+.|.|... ..|.|. ..+.|.+++...
T Consensus 197 ------------------------------~~P~~~----~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~- 241 (389)
T 2jll_A 197 ------------------------------SSPYGV----KIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEI- 241 (389)
T ss_dssp ------------------------------CCCEEE----EEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSC-
T ss_pred ------------------------------CCCcce----EEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcc-
Confidence 123111 01123457788988741 122342 367888876421
Q ss_pred CCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy2145 360 ASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFV 407 (808)
Q Consensus 360 ~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 407 (808)
............|.|.++.+.|.|.|+|.|.|..|....+..+.+
T Consensus 242 ---~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~ 286 (389)
T 2jll_A 242 ---WKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIF 286 (389)
T ss_dssp ---CEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEE
T ss_pred ---cEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEE
Confidence 112222223347999999999999999999999997654433333
No 85
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.97 E-value=2.6e-30 Score=275.05 Aligned_cols=278 Identities=15% Similarity=0.188 Sum_probs=196.6
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCC----CCeEEEEeeCC--EE-------------c--cCCCceEEE-ecCce
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSD----NTMKVEWFHNN--VP-------------I--KSGSRFTET-NNFGF 240 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~----p~~~v~W~~~g--~~-------------l--~~~~~~~~~-~~~~~ 240 (808)
++.+...+.++.+.+|++++|.|.+. +. +.+.|.|+|++ .. + ....++.+. ...+.
T Consensus 14 ~~~~~~~~~~~~v~~G~~v~L~C~~~--~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 91 (331)
T 3u83_A 14 PSQVVQVNDSMYGFIGTDVVLHCSFA--NPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTD 91 (331)
T ss_dssp -------CEEEEEETTCCEEECCBCS--SCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSB
T ss_pred CcceEEcCCcEEEEecCCEEEeeecC--CCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCC
Confidence 44556667778999999999999984 44 56689999954 11 1 123444443 12233
Q ss_pred EEEEEccCCCCCcEEEEEE-EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeec
Q psy2145 241 VALDIMQCLPEDSGVYTCR-AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFT 319 (808)
Q Consensus 241 ~~L~I~~~~~~D~G~Y~C~-a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~ 319 (808)
.+|.|.+++.+|+|.|+|. +.|..|.....+.|.|..+|.+ .+.
T Consensus 92 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~-----------------------------------~~~ 136 (331)
T 3u83_A 92 GTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTN-----------------------------------WIE 136 (331)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEE-----------------------------------EEE
T ss_pred ceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcc-----------------------------------eee
Confidence 4799999999999999998 5667788888889988764321 112
Q ss_pred cCCCceEeecC---CeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCc----EEEEEEccCCCCCCeEEEEEE
Q psy2145 320 QPMRDIHVAEN---QAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFG----YVALNFKYTYPEDSGTYTCRA 392 (808)
Q Consensus 320 ~~~~~~~v~~G---~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~d~G~Y~C~a 392 (808)
.......+.+| +.+.|.|.+. .+.|.+.+.|++++...... .......+ ...|.|..+..+|+|.|+|.|
T Consensus 137 ~~~~~~~~~~g~~~~~~~l~C~~~-~~~p~~~i~W~~~~~~~~~~--~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 213 (331)
T 3u83_A 137 GTQAVLRAKKGQDDKVLVATCTSA-NGKPPSVVSWETRLKGEAEY--QEIRNPNGTVTVISRYRLVPSREAHQQSLACIV 213 (331)
T ss_dssp ECSSCEEECTTCCCCEEEEEEEEE-EEBSCCEEEEEESSCCEEEE--EEEECTTSCEEEEEEEEECCCGGGTTCEEEEEE
T ss_pred cCCCceeecCCCccceEEEEEEec-CCcCCceEEEEcCCCCcccc--ceeECCCCcEEEEEEEEEEeccccCCCEEEEEE
Confidence 23445677788 8899999832 78899999999953221110 00111111 136899999999999999999
Q ss_pred EcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecc
Q psy2145 393 VNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDT 472 (808)
Q Consensus 393 ~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 472 (808)
.|..|....++.|.|..+|.+.
T Consensus 214 ~n~~~~~~~~~~l~V~~~P~~~---------------------------------------------------------- 235 (331)
T 3u83_A 214 NYHMDRFKESLTLNVQYEPEVT---------------------------------------------------------- 235 (331)
T ss_dssp EETTEEEEEEEECCEEEEEEEE----------------------------------------------------------
T ss_pred ecCCCcceeeEEEEEecCCeEE----------------------------------------------------------
Confidence 9999988888888887654221
Q ss_pred cCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEECCEecCCCC
Q psy2145 473 QHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFRNEKPLEDSS 551 (808)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k~g~~l~~~~ 551 (808)
..+... ..+.+|+.+.|.|.+ .|.|.+. |.|+|+|..+....
T Consensus 236 ----------------------------------~~~~~~-~~~~~g~~~~l~C~~--~g~p~p~~i~W~~~~~~~~~~~ 278 (331)
T 3u83_A 236 ----------------------------------IEGFDG-NWYLQRMDVKLTCKA--DANPPATEYHWTTLNGSLPKGV 278 (331)
T ss_dssp ----------------------------------EECCCS-CCBTTCCCEEEEEEE--EEESCCCEEEEEETTBSCCTTE
T ss_pred ----------------------------------EecCCC-ceEeCCCeEEEEEeC--cCCCCCCEEEEEECCCcccccc
Confidence 011111 147889999999999 7899998 99999999886542
Q ss_pred CeEEEeeCcEEEEEEC-CCCCCCCEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 552 RITTKHDFGYVAMDLS-HVRAEDEGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 552 ~~~~~~~~~~~~L~I~-~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
.. .++ +|.|. ++..+|+|.|+|.|.|..|..+.++.|.|...+.
T Consensus 279 --~~--~~~--~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 279 --EA--QNR--TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAA 323 (331)
T ss_dssp --EE--ETT--EEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC---
T ss_pred --ee--cCc--EEEEeCCCccccCeEEEEEEEeccccceEEEEEEEeccch
Confidence 22 233 79999 9999999999999999999999999999987543
No 86
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.8e-30 Score=270.50 Aligned_cols=269 Identities=17% Similarity=0.216 Sum_probs=180.1
Q ss_pred eeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCc-EEEEEEccCCCCCCeEEEEEEEcC
Q psy2145 317 VFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFG-YVALNFKYTYPEDSGTYTCRAVNE 395 (808)
Q Consensus 317 ~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~-~~~L~I~~v~~~d~G~Y~C~a~n~ 395 (808)
.|........+.+|+.+.|.|.+ .+. |+|+++|..+. .+.....++. ..+|.|.++..+|+|.|+|.|.|.
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~--~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 73 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSG--SAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDS 73 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEE--SSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-
T ss_pred eecCCCCeEEEeCCCcEEEEEec--cce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEccc
Confidence 34444456778999999999998 554 99999998873 2333333332 368999999999999999999998
Q ss_pred CcceE-EEEEEEEEec-ccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEeccc
Q psy2145 396 LGEAV-TSSTLFVESK-ASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQ 473 (808)
Q Consensus 396 ~g~~~-~~~~l~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 473 (808)
.|... .+..+.|... +...
T Consensus 74 ~g~~~~~~~~~~v~v~~p~~~----------------------------------------------------------- 94 (289)
T 3mjg_X 74 RGLETDERKRLYIFVPDPTVG----------------------------------------------------------- 94 (289)
T ss_dssp -----CCCEEEEEECCCTTCC-----------------------------------------------------------
T ss_pred CCCCcCcEEeEEEEEECCCcC-----------------------------------------------------------
Confidence 87622 2233444322 1000
Q ss_pred CCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCC--cccccCCCceEEEEEEeeCCCCCcEEEEEECC--EecCC
Q psy2145 474 HPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQN--IDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPLED 549 (808)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~--~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l~~ 549 (808)
|...... ...+.+|+.+.|.|.+ . .|.+.++|++++ ..+.
T Consensus 95 --------------------------------~~~~~~~~~~~~v~~G~~v~l~C~~--~-~p~~~v~w~~~~~~~~~~- 138 (289)
T 3mjg_X 95 --------------------------------FLPNDAEELFIFLTEITEITIPCRV--T-DPQLVVTLHEKKGDVALP- 138 (289)
T ss_dssp --------------------------------BCCCCHHHHEEEESSCCCEEECCCB--S-CTTSCEEEEESSCCSCCC-
T ss_pred --------------------------------cccCCCCcceEEeecCCeEEEEeEc--C-CCCceEEEEeCCCCCccc-
Confidence 0000000 0147899999999998 5 677889998865 3332
Q ss_pred CCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEE-EEEEEEecccccccccCcccccccccccCCCCCCCCC
Q psy2145 550 SSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTT-ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQE 628 (808)
Q Consensus 550 ~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s-~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~ 628 (808)
..+ ....+ +. ..+|+|.|+|.|.|..|...+. ..|.|...
T Consensus 139 -~~~--~~~~~---~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~----------------------------- 179 (289)
T 3mjg_X 139 -VPY--DHQRG---FS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV----------------------------- 179 (289)
T ss_dssp -CCE--ETTTE---EE----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-----------------------------
T ss_pred -eee--cCCcC---ee----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-----------------------------
Confidence 111 11111 11 3579999999999987765543 45555431
Q ss_pred CccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-----eCCEEEEEEccCCC
Q psy2145 629 PERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQH-----DFGYVTLDITKCVP 703 (808)
Q Consensus 629 ~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-----~~~~~~L~I~~v~~ 703 (808)
.+|.+...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+++|+.+.......... .....+|.|.++..
T Consensus 180 -----~~p~i~~~~~~-~~v~~G~~v~L~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 251 (289)
T 3mjg_X 180 -----SSINVSVNAVQ-TVVRQGENITLMCIV--IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAEL 251 (289)
T ss_dssp -----CCCCCEEEESC-SEEETTSCEEEEEEE--ESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCS
T ss_pred -----CCCCcEEeCCc-ceeEcCCCEEEEEEE--CCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccCh
Confidence 12555544443 568899999999999 799999999999887654322211111 12346899999999
Q ss_pred CCcEEEEEEEEeCCcceEEEEEEEEEeCCCcc
Q psy2145 704 ADSGVYMCKAINRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~ 735 (808)
+|+|.|+|.|.|.+|....++.|.|.+++.+-
T Consensus 252 ~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~~~ 283 (289)
T 3mjg_X 252 EDSGTYTCNVTESVNDHQDEKAINITVVESGH 283 (289)
T ss_dssp SCCEEEEEEEEETTTTEEEEEEEEEEEEC---
T ss_pred hhCcEEEEEeecCCCCceeEEEEEEEEEecCc
Confidence 99999999999999999999999999887654
No 87
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.97 E-value=5.4e-30 Score=263.17 Aligned_cols=248 Identities=19% Similarity=0.239 Sum_probs=184.3
Q ss_pred CCeeccCCCceEeecCCeEEEEEEEeecC-CCcc--EEEEEECCEeccCCCcEEEEeeCcEEEEEEcc---CCCCCCeE-
Q psy2145 315 APVFTQPMRDIHVAENQAAHFEARLIPVG-DSKL--KVTWLRNGVPIQASNRVSTMHDFGYVALNFKY---TYPEDSGT- 387 (808)
Q Consensus 315 ~p~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~---v~~~d~G~- 387 (808)
+|.+..+ ..+.+|+.+.|.|.+ .| .|.+ .|+|+|+|..+.. .+..+++ .|.+.. +..+|+|.
T Consensus 6 ~p~~~~~---~~v~~G~~v~l~C~~--~g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g~g 74 (265)
T 2oz4_A 6 PPQLVSP---RVLEVDTQGTVVCSL--DGLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEGTQ 74 (265)
T ss_dssp CCEEECC---SEEETTEEEEEEEEE--ESCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCEEE
T ss_pred CCccccC---ceEecCCCEEEEEEc--cCCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCCcc
Confidence 5555443 367899999999999 56 7766 9999999998865 2333333 344443 37788885
Q ss_pred -EEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCc
Q psy2145 388 -YTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEG 466 (808)
Q Consensus 388 -Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 466 (808)
|+|.|.|..|....++.|.|...+.
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~------------------------------------------------------ 100 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPA------------------------------------------------------ 100 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCC------------------------------------------------------
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCC------------------------------------------------------
Confidence 9999999999988888888875321
Q ss_pred eeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEe
Q psy2145 467 TIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKP 546 (808)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~ 546 (808)
|.+.. .+. .+.+|+.+.|.|.+ . |.+.|+| ||..
T Consensus 101 -------------------------------------p~~~~--~~~-~v~~G~~v~l~C~~--~--p~~~i~W--~g~~ 134 (265)
T 2oz4_A 101 -------------------------------------PNVIL--TKP-EVSEGTEVTVKCEA--H--PRAKVTL--NGVP 134 (265)
T ss_dssp -------------------------------------CEEEE--SCS-EEETTCEEEEEEEC--C--TTSEEEE--SSCS
T ss_pred -------------------------------------ceeec--CCc-eecCCCcEEEEEEc--c--CCCEEEE--CCEE
Confidence 11221 111 47789999999998 4 8999999 8888
Q ss_pred cCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCC-eeEE---EEEEEEEEecccccccccCcccccccccccCCC
Q psy2145 547 LEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNAL-GEAV---TTASMKIKTKAGLQLETQHPEGLKKIQELEQPA 622 (808)
Q Consensus 547 l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~-G~~~---~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~ 622 (808)
+.... ....|.|..+..+|+|.|+|.|.|.. |... .++.|.|...|.+....
T Consensus 135 ~~~~~--------~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~---------------- 190 (265)
T 2oz4_A 135 AQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERD---------------- 190 (265)
T ss_dssp SSCCS--------SEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGG----------------
T ss_pred ccCCC--------CcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcccccc----------------
Confidence 84322 23368899999999999999998644 7665 67888888765432110
Q ss_pred CCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCC
Q psy2145 623 SPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCV 702 (808)
Q Consensus 623 ~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~ 702 (808)
......+.+|+.+.|.|.+ .|+|.|.|.|+|+|..+..... | ..+.
T Consensus 191 -------------------~p~~~~v~~g~~~~l~C~~--~g~P~p~i~W~~~~~~~~~~g~-----------~--~~v~ 236 (265)
T 2oz4_A 191 -------------------CPGNWTWPENSQQTPMCQA--WGNPLPELKCLKDGTFPLPIGE-----------S--VTVT 236 (265)
T ss_dssp -------------------SCSEEEEETTCEECCCCCC--EEESCCEEEEEETTTEECCTTS-----------C--EECC
T ss_pred -------------------CCCccEEcCCCeEEEEeEC--ccCCCCeEEEEECCcccCCCCc-----------E--EEee
Confidence 0112357889999999998 7999999999999984332221 2 2378
Q ss_pred CCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 703 PADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 703 ~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
.+|+|.|+|.|.|.+|.++.++.|.|..+
T Consensus 237 ~~d~G~Y~C~a~N~~G~~~~~~~l~V~~p 265 (265)
T 2oz4_A 237 RDLEGTYLCRARSTQGEVTREVTVNVLSP 265 (265)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred hhhCeEEEEEEECCCCcEEEEEEEEEecC
Confidence 89999999999999999999999999853
No 88
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.97 E-value=2.3e-30 Score=270.15 Aligned_cols=274 Identities=19% Similarity=0.242 Sum_probs=201.4
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+..+.+.+|++++|.|.+ .+. |.|++++.. +.....+....+|.|.+++.+|+|.|+|.|
T Consensus 2 ~~~P~i~~~~~~~~v~~G~~v~L~C~~--~~~----v~W~~~~~~-----~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 70 (292)
T 4dkd_C 2 GSIPVIEPSVPELVVKPGATVTLRCVG--NGS----VEWDGPPSP-----HWTLYSDGSSSILSTNNATFQNTGTYRCTE 70 (292)
T ss_dssp --CCEEESCCSSCEECTTCCEEEEEEC--SSC----CCBCCCCCS-----SCEECCBTTEEEEEESSCCGGGCSCEEECC
T ss_pred CCCceecCCCCeEEEcCCCcEEEEEcC--CCc----eEEccCCCC-----ceEEeccCceEEEEEcccccccCEEEEEEE
Confidence 358999999999999999999999998 342 999976542 334444455568999999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEe
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLI 340 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~ 340 (808)
.|..|....++.|.|..++ ..+...+....+.+|+.+.|.|.+
T Consensus 71 ~n~~~~~~~~~~l~V~~~~------------------------------------~~~~~~~~~~~v~~g~~v~l~C~~- 113 (292)
T 4dkd_C 71 PGDPLGGSAAIHLYVKDPA------------------------------------RPWNVLAQEVVVFEDQDALLPCLL- 113 (292)
T ss_dssp CC----CCEEECCEECCSS------------------------------------CCEEESCSEEEEETTSCEECCEEE-
T ss_pred ccCCCCcceEEEEEEcCcc------------------------------------ccccccCCeEEEcCCCcEEEeeeC-
Confidence 9988888888888886532 123444556788999999999998
Q ss_pred ecCCCc--cEEEEEEC-CEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEEEEeccccccc
Q psy2145 341 PVGDSK--LKVTWLRN-GVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVT-SSTLFVESKASLQLD 416 (808)
Q Consensus 341 ~~g~p~--~~v~W~~~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~ 416 (808)
.+ |. +.|.|+++ |..+....++....+++ |.|.++..+|+|.|+|.|.|..|...+ .+.|.|.....
T Consensus 114 -~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~---L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~---- 184 (292)
T 4dkd_C 114 -TD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHG---FTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIP---- 184 (292)
T ss_dssp -SS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSC---CEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCC----
T ss_pred -CC-CCcceeEEEEecCCCccccCCcccccCCce---EEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCC----
Confidence 55 44 78999997 67776666665544443 999999999999999999998776644 57777764210
Q ss_pred ccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcC
Q psy2145 417 TQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVD 496 (808)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (808)
T Consensus 185 -------------------------------------------------------------------------------- 184 (292)
T 4dkd_C 185 -------------------------------------------------------------------------------- 184 (292)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCC-CcEEEEEECCEecCCCCCeEEEee--CcEEEEEECCCCCCC
Q psy2145 497 DNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-TLKVEWFRNEKPLEDSSRITTKHD--FGYVAMDLSHVRAED 573 (808)
Q Consensus 497 ~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~~~v~W~k~g~~l~~~~~~~~~~~--~~~~~L~I~~v~~~D 573 (808)
.+|.|...+... .+.+|+.+.|.|.+ .+.| .+.+.|++++..+........... .....|.|.+++.+|
T Consensus 185 -----~~p~i~~~~~~~-~~~~g~~v~l~C~~--~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 256 (292)
T 4dkd_C 185 -----GPPALTLVPAEL-VRIRGEAAQIVCSA--SSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQH 256 (292)
T ss_dssp -----SSCEEEEESSCB-CCCSSSCEEEEEEE--EESSSCCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTS
T ss_pred -----CCCeEEccCCce-eEecCCCEEEEEEe--cCCCCceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhc
Confidence 134444444433 46799999999999 4544 567999999987764433222111 122479999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEec
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~ 599 (808)
+|.|+|.|.|..|..+.++.|.|...
T Consensus 257 ~G~Y~C~a~N~~g~~~~~~~l~V~~~ 282 (292)
T 4dkd_C 257 AGNYSCVASNVQGKHSTSMFFRVVES 282 (292)
T ss_dssp CEEEEEEEECSSCEEEEEEEECC---
T ss_pred CeEEEEEEecCCCCceeEEEEEEeeC
Confidence 99999999999999999999999875
No 89
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=274.08 Aligned_cols=274 Identities=17% Similarity=0.252 Sum_probs=180.2
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCC-CCeEEEEeeCCEEcc---------CCCceEEEec-----CceEEEEEccC
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSD-NTMKVEWFHNNVPIK---------SGSRFTETNN-----FGFVALDIMQC 248 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~-p~~~v~W~~~g~~l~---------~~~~~~~~~~-----~~~~~L~I~~~ 248 (808)
..|...+.++.+.+|++++|.|.+ .+. |.+.|.|+|+|.++. ...++....+ .+..+|.|.++
T Consensus 4 ~~v~~~p~~~~v~~G~~v~L~C~~--~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 4 LQVIQPDKSVSVAAGESAILHCTV--TSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CCEECCCSEEEEETTSCEEECCEE--SCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred eEEEcCCCceEEecCCcEEEEEEc--cCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 456777888999999999999999 455 778999999886432 1124433221 33447999999
Q ss_pred CCCCcEEEEEEEEeCceeE-----EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCC
Q psy2145 249 LPEDSGVYTCRAVNALGQA-----VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMR 323 (808)
Q Consensus 249 ~~~D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~ 323 (808)
+.+|+|.|+|.|.|..|.. ...+.|.|...+ .+|.+..+
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p----------------------------------~~p~i~~~-- 125 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKP----------------------------------SAPVVSGP-- 125 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCC----------------------------------CCCEEECC--
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEEecC----------------------------------CCceeecc--
Confidence 9999999999999976531 234677776533 24444422
Q ss_pred ceEeecCCeEEEEEEEeecCCCcc--EEEEEECCEeccCCCcEEEEe-eCc----EEEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 324 DIHVAENQAAHFEARLIPVGDSKL--KVTWLRNGVPIQASNRVSTMH-DFG----YVALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g~p~~--~v~W~~~g~~l~~~~~~~~~~-~~~----~~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
...+.+|+.+.|.|.+ .|.|.+ .|+|++||.++.......... +++ ...|.|.....+|.|.|+|.|.|..
T Consensus 126 ~~~~~~g~~~~l~C~~--~g~p~~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~ 203 (327)
T 2wng_A 126 AARATPQHTVSFTCES--HGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVT 203 (327)
T ss_dssp SSCBCTTCEEEEEEEE--EEEBSSCCEEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTT
T ss_pred ccccCCCCEEEEEEEE--eCccCCCcEEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccc
Confidence 3567899999999999 565554 999999999987654222211 111 1257888777778899999999988
Q ss_pred cce---EEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEeccc
Q psy2145 397 GEA---VTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQ 473 (808)
Q Consensus 397 g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 473 (808)
|.. ..++.+.+.
T Consensus 204 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 218 (327)
T 2wng_A 204 LQGDPLRGTANLSET----------------------------------------------------------------- 218 (327)
T ss_dssp SCSCCEEEEEEGGGT-----------------------------------------------------------------
T ss_pred cCCCcccceEEeccc-----------------------------------------------------------------
Confidence 763 222222110
Q ss_pred CCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCC-CCc-EEEEEECCEecCCCC
Q psy2145 474 HPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD-PTL-KVEWFRNEKPLEDSS 551 (808)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~~-~v~W~k~g~~l~~~~ 551 (808)
...+|.+...... +.+|+.+.|.|.+ .|. |++ .|.|+|||+.+....
T Consensus 219 --------------------------v~~~P~i~~~~~~---~~~G~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~ 267 (327)
T 2wng_A 219 --------------------------IRVPPTLEVTQQP---VRAENQVNVTCQV--RKFYPQRLQLTWLENGNVSRTET 267 (327)
T ss_dssp --------------------------BCBCCEEEEEEEC---CSSTTCCEEEEEE--EEEBSSCEEEEEEETTEEEEEEE
T ss_pred --------------------------cCCCCEEEEecCC---cCCCCcEEEEEEE--ccccCCCcEEEEEECCeEccCcc
Confidence 0113444333222 6789999999999 564 444 899999999886432
Q ss_pred --CeEEEeeCcE---EEEEECCCCCCCCEEEEEEEEeCCeeEEEEEE
Q psy2145 552 --RITTKHDFGY---VAMDLSHVRAEDEGIYICKATNALGEAVTTAS 593 (808)
Q Consensus 552 --~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~ 593 (808)
++....++.+ ..|.|.++..+|+|.|+|.|.|..|...+...
T Consensus 268 ~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~ 314 (327)
T 2wng_A 268 ASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSH 314 (327)
T ss_dssp CCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEE
T ss_pred cCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhhe
Confidence 1222222211 36999999999999999999999987654433
No 90
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.97 E-value=9.5e-29 Score=259.62 Aligned_cols=278 Identities=18% Similarity=0.256 Sum_probs=212.0
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCC-CceEEE-ecCceEEEEEccCCCCCcEEEEEE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSG-SRFTET-NNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~-~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
.+|.|...+.++.+.+|++++|.|.+ .+.|.+.|.|+|+|..+... .++... ..++..+|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEE--ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEE--eCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 58999999999999999999999999 58888999999999998754 355543 356677999999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
|.|..|....++.|.|..++.+ ..|.+...+....+.+|+.+.|.|.+
T Consensus 81 a~n~~g~~~~~~~l~V~~~p~~--------------------------------~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (305)
T 2nzi_A 81 ATNQGGSVSGTASLEVEVPAKI--------------------------------HLPKTLEGMGAVHALRGEVVSIKIPF 128 (305)
T ss_dssp EEETTEEEEEEEEEEECEEEEE--------------------------------CCCHHHHSSCCEEEETTCCEEEEEEE
T ss_pred EEcCCCCccceEEEEEecCCcc--------------------------------CCCccccccccEEecCCCEEEEEEEE
Confidence 9999999888899998764322 12333333456778899999999999
Q ss_pred eecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEcc-CCCCCCeEEEEEEEcCCcceEEEEEEEEEeccccccccc
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKY-TYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQ 418 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~ 418 (808)
.|.|.+.+.|+++|..+..+.++.+.......+|.|.+ +..+|+|.|+|.|.|..|....++.|.|...|..+....
T Consensus 129 --~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~p~~~~ 206 (305)
T 2nzi_A 129 --SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPDPPRGVK 206 (305)
T ss_dssp --EEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCCCCCEEEE
T ss_pred --CCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEEEEEecCCCCCCCce
Confidence 78899999999999999888888777666777899999 999999999999999999999999999987653221000
Q ss_pred chHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCC
Q psy2145 419 NEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDN 498 (808)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (808)
+.......+.+.+..
T Consensus 207 ------------------------~~~~~~~~v~l~w~~----------------------------------------- 221 (305)
T 2nzi_A 207 ------------------------VSDVSRDSVNLTWTE----------------------------------------- 221 (305)
T ss_dssp ------------------------EESCCSSCEEEEEEC-----------------------------------------
T ss_pred ------------------------eeeccCCEEEEEEcC-----------------------------------------
Confidence 000000000000000
Q ss_pred CccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 499 ATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 499 ~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
....|....+.|.+ ...|.+...|++.+... .. .|.|.++...|.|.|+
T Consensus 222 ----------------p~~~g~~~i~~y~v--~~~~~~~~~w~~~~~~~-----------~~--~~~i~~l~~~~~y~~~ 270 (305)
T 2nzi_A 222 ----------------PASDGGSKITNYIV--EKCATTAERWLRVGQAR-----------ET--RYTVINLFGKTSYQFR 270 (305)
T ss_dssp ----------------CSCCSBSCEEEEEE--EEEETTSCCEEEEEEES-----------SS--EEEECSCCSSCEEEEE
T ss_pred ----------------CccCCCCceeEEEE--EEecCCCCccEECcccc-----------Cc--eEEecCCCCCCeEEEE
Confidence 01235556677777 55666677887765543 11 6999999999999999
Q ss_pred EEEEeCCeeEEEE
Q psy2145 579 CKATNALGEAVTT 591 (808)
Q Consensus 579 C~a~N~~G~~~~s 591 (808)
|.|.|..|....+
T Consensus 271 ~~A~N~~G~~~~S 283 (305)
T 2nzi_A 271 VIAENKFGLSKPS 283 (305)
T ss_dssp EEEEETTEECCCC
T ss_pred EEEEeCCcccCCc
Confidence 9999999976544
No 91
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.97 E-value=2.4e-30 Score=273.31 Aligned_cols=276 Identities=11% Similarity=0.100 Sum_probs=181.6
Q ss_pred CCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 314 QAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 314 ~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
.+|.|...+. ..+.+|+.++|.|.+ .+. .+.+.|+|+|..+..... .....+ .|.|.++..+|+|.|+|.|.
T Consensus 23 ~~P~i~~~p~-~~v~~G~~v~L~C~~--~~~-~~~~~W~k~g~~~~~~~~--~~~~~~--~L~I~~v~~~D~G~Y~C~a~ 94 (316)
T 3vh8_G 23 DKPFLSAWPS-AVVPRGGHVTLRCHY--RHR-FNNFMLYKEDRIHIPIFH--GRIFQE--SFNMSPVTTAHAGNYTCRGS 94 (316)
T ss_dssp -CCEEEEESC-SEEETTSCEEEEEEB--TTB-CCSEEEEESSCSSSCHHH--HCCBSS--CEEECSCCGGGCEEEEEEEB
T ss_pred CCCEeeccCC-CccCCCCCEEEEEEc--cCC-CceEEEEeCCCccceeec--CCcceE--EEEECCCCcccCeEEEEEEE
Confidence 4777776665 568899999999998 565 688999999987643210 011122 69999999999999999998
Q ss_pred cCCc-----ceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCcee
Q psy2145 394 NELG-----EAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTI 468 (808)
Q Consensus 394 n~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 468 (808)
|..+ .....+.|.|...+
T Consensus 95 ~~~~~~~~~~~s~~~~l~V~~~~--------------------------------------------------------- 117 (316)
T 3vh8_G 95 HPHSPTGWSAPSNPVVIMVTGNH--------------------------------------------------------- 117 (316)
T ss_dssp CSSSSSSBCCCCCCEEEEEECSS---------------------------------------------------------
T ss_pred cCCCCcceecCCCcEEEEEecCC---------------------------------------------------------
Confidence 7432 22334556665321
Q ss_pred EecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecC
Q psy2145 469 ITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLE 548 (808)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~ 548 (808)
.+|.+...... .+.+|++++|.|.+ . .+.+.+.|+|+|..+.
T Consensus 118 ---------------------------------~~p~~~~~~~~--~v~~G~~v~L~C~~--~-~~~~~~~w~k~g~~~~ 159 (316)
T 3vh8_G 118 ---------------------------------RKPSLLAHPGP--LVKSGERVILQCWS--D-IMFEHFFLHKEGISKD 159 (316)
T ss_dssp ---------------------------------CCCEEEEESCS--EEETTCCEEEEEEE--S-SCCSEEEEEETTCCSC
T ss_pred ---------------------------------CCCeEEecCCC--ccCCCCeEEEEEcC--C-CCCcEEEEEECCCccc
Confidence 12333332222 37899999999998 3 4567899999998775
Q ss_pred CCCCeEE-EeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeE-----EEEEEEEEEecccccccccCcccccccccccCCC
Q psy2145 549 DSSRITT-KHDFGYVAMDLSHVRAEDEGIYICKATNALGEA-----VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPA 622 (808)
Q Consensus 549 ~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~-----~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~ 622 (808)
....... ........|.|.+++.+|+|.|+|.|.|..|.. +..+.|.|...+
T Consensus 160 ~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~---------------------- 217 (316)
T 3vh8_G 160 PSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY---------------------- 217 (316)
T ss_dssp CEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS----------------------
T ss_pred cceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC----------------------
Confidence 4321111 111123479999999999999999999998742 444666665421
Q ss_pred CCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeC-CEEEEEEccC
Q psy2145 623 SPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF-GYVTLDITKC 701 (808)
Q Consensus 623 ~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~~~~L~I~~v 701 (808)
.+|.+..... ..+.+|+.++|.|.+ . .|.+.+.|+|+|..+...........+ ....|.|.++
T Consensus 218 -----------~~p~i~~~~~--~~v~~G~~v~L~C~~--~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v 281 (316)
T 3vh8_G 218 -----------EKPSLSAQPG--PKVQAGESVTLSCSS--R-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPA 281 (316)
T ss_dssp -----------CCCEEEEESC--SCCCTTSCCEEEEEE--S-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC--
T ss_pred -----------CCCeEEeCCC--CeecCCCcEEEEEEC--C-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCc
Confidence 2466655533 267899999999999 4 588999999999877642221111111 2368999999
Q ss_pred CCCCcEEEEEEEEeCCcc-----eEEEEEEEEEeCC
Q psy2145 702 VPADSGVYMCKAINRAGE-----AVSSTSLKVKSKS 732 (808)
Q Consensus 702 ~~~D~G~Y~C~A~N~~G~-----~~~s~~l~V~~~p 732 (808)
. |+|.|+|.|.|..|. .+..+.|.|.++|
T Consensus 282 ~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 282 T--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp -----CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred C--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 9 999999999998774 4556778887765
No 92
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.97 E-value=2.4e-29 Score=261.93 Aligned_cols=266 Identities=15% Similarity=0.211 Sum_probs=179.0
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCc-eEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFG-FVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~-~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
.|.....++.+.+|++++|.|.+ .+. |.|+|+|..+. .+.....++. ..+|.|.+++.+|+|.|+|.|.|.
T Consensus 2 ~i~~~~~~~~v~~G~~v~L~C~~--~~~----v~W~~~~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 73 (289)
T 3mjg_X 2 VVTPPGPELVLNVSSTFVLTCSG--SAP----VVWERMSQEPP--QEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDS 73 (289)
T ss_dssp CBCSSCSEEECCTTCCEEEEEEE--SSC----CEEEBTTBCCS--EEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC-
T ss_pred eecCCCCeEEEeCCCcEEEEEec--cce----EEEECCCCCcc--cceeccCCCceeEEEEEccCChhhCEEEEEEEccc
Confidence 34445556789999999999999 343 99999999874 2233323322 358999999999999999999998
Q ss_pred cee---EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCC--ceEeecCCeEEEEEE
Q psy2145 264 LGQ---AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMR--DIHVAENQAAHFEAR 338 (808)
Q Consensus 264 ~g~---~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~--~~~v~~G~~~~l~C~ 338 (808)
.|. ...++.|.|..+. .|.+...+. ...+.+|+.+.|.|.
T Consensus 74 ~g~~~~~~~~~~v~v~~p~-----------------------------------~~~~~~~~~~~~~~v~~G~~v~l~C~ 118 (289)
T 3mjg_X 74 RGLETDERKRLYIFVPDPT-----------------------------------VGFLPNDAEELFIFLTEITEITIPCR 118 (289)
T ss_dssp -----CCCEEEEEECCCTT-----------------------------------CCBCCCCHHHHEEEESSCCCEEECCC
T ss_pred CCCCcCcEEeEEEEEECCC-----------------------------------cCcccCCCCcceEEeecCCeEEEEeE
Confidence 876 2234444443211 111111111 156889999999999
Q ss_pred EeecCCCccEEEEEECC--EeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecccccc
Q psy2145 339 LIPVGDSKLKVTWLRNG--VPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESKASLQL 415 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g--~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~ 415 (808)
+ . .|.+.++|++++ .++.. .+ ....+. + ...|+|.|+|.|.|..+...+. ..|.|...
T Consensus 119 ~--~-~p~~~v~w~~~~~~~~~~~--~~--~~~~~~--~-----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~----- 179 (289)
T 3mjg_X 119 V--T-DPQLVVTLHEKKGDVALPV--PY--DHQRGF--S-----GIFEDRSYICKTTIGDREVDSDAYYVYRLQV----- 179 (289)
T ss_dssp B--S-CTTSCEEEEESSCCSCCCC--CE--ETTTEE--E-----ECCCSSEEEEEEEETTEEEECCCEEEEECCC-----
T ss_pred c--C-CCCceEEEEeCCCCCccce--ee--cCCcCe--e-----eeccCcEEEEEEEeCCceeeeeeEEEEecCC-----
Confidence 8 4 677889998865 33321 11 111121 1 3579999999999887665443 44555421
Q ss_pred cccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCc
Q psy2145 416 DTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEV 495 (808)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (808)
T Consensus 180 -------------------------------------------------------------------------------- 179 (289)
T 3mjg_X 180 -------------------------------------------------------------------------------- 179 (289)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEe-----eCcEEEEEECCCC
Q psy2145 496 DDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKH-----DFGYVAMDLSHVR 570 (808)
Q Consensus 496 ~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~-----~~~~~~L~I~~v~ 570 (808)
.+|.+...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+++++.+.......... .....+|.|.++.
T Consensus 180 ------~~p~i~~~~~~~-~v~~G~~v~L~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 250 (289)
T 3mjg_X 180 ------SSINVSVNAVQT-VVRQGENITLMCIV--IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAE 250 (289)
T ss_dssp ------CCCCCEEEESCS-EEETTSCEEEEEEE--ESCSSBEEEEECTTSSSSCCCCCEEEESCTTTTEEEEEEEESSCC
T ss_pred ------CCCCcEEeCCcc-eeEcCCCEEEEEEE--CCCCCcceEEEcCCccCCCcccccccccCCcceEEEEEEEEcccC
Confidence 123333333332 58899999999999 789999999999887654432222111 1234589999999
Q ss_pred CCCCEEEEEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 571 AEDEGIYICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
.+|+|.|+|.|.|..|....++.|.|...+.
T Consensus 251 ~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 251 LEDSGTYTCNVTESVNDHQDEKAINITVVES 281 (289)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEEEEC-
T ss_pred hhhCcEEEEEeecCCCCceeEEEEEEEEEec
Confidence 9999999999999999999999999998654
No 93
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.97 E-value=6.2e-29 Score=255.22 Aligned_cols=249 Identities=19% Similarity=0.245 Sum_probs=185.1
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecC-CCCe--EEEEeeCCEEccCCCceEEEecCceEEEEEccC---CCCCcE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVS-DNTM--KVEWFHNNVPIKSGSRFTETNNFGFVALDIMQC---LPEDSG 254 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~-~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~---~~~D~G 254 (808)
..+|.+..+ ..+.+|++++|.|.+. + .|.+ .|.|+|+|..+.. .....++ .|.|..+ +.+|+|
T Consensus 4 ~~~p~~~~~---~~v~~G~~v~l~C~~~--g~~p~p~~~v~W~k~~~~l~~----~~~~~~~--~~~~~~~~~~~~~d~g 72 (265)
T 2oz4_A 4 ATPPQLVSP---RVLEVDTQGTVVCSLD--GLFPVSEAQVHLALGDQRLNP----TVTYGND--SFSAKASVSVTAEDEG 72 (265)
T ss_dssp SSCCEEECC---SEEETTEEEEEEEEEE--SCSCGGGCEEEEEETTEECCC----EEEECSS--EEEEEEEEEECGGGCE
T ss_pred CCCCccccC---ceEecCCCEEEEEEcc--CCCCCcceEEEEEeCCEECCc----eEeeCCC--eEEEEeecccccccCC
Confidence 445666543 3688999999999995 5 6665 9999999999865 2223333 4444444 778888
Q ss_pred E--EEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCe
Q psy2145 255 V--YTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQA 332 (808)
Q Consensus 255 ~--Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~ 332 (808)
. |+|.|.|..|....++.|.|...+ +|.+. +....+.+|+.
T Consensus 73 ~g~Y~C~a~n~~~~~~~~~~l~V~~~p-----------------------------------~p~~~--~~~~~v~~G~~ 115 (265)
T 2oz4_A 73 TQRLTCAVILGNQSQETLQTVTIYSFP-----------------------------------APNVI--LTKPEVSEGTE 115 (265)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEECCC-----------------------------------CCEEE--ESCSEEETTCE
T ss_pred cceEEEEEecCCCCcEEEEEEEEeCCC-----------------------------------Cceee--cCCceecCCCc
Confidence 4 999999999998888999987532 34444 23556889999
Q ss_pred EEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCC-cceE---EEEEEEEE
Q psy2145 333 AHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNEL-GEAV---TSSTLFVE 408 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~-g~~~---~~~~l~V~ 408 (808)
+.|.|.+ . |.+.|+| +|.++... +....|.|..+..+|+|.|+|.|.|.. |... ..+.|.|.
T Consensus 116 v~l~C~~--~--p~~~i~W--~g~~~~~~--------~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~ 181 (265)
T 2oz4_A 116 VTVKCEA--H--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL 181 (265)
T ss_dssp EEEEEEC--C--TTSEEEE--SSCSSSCC--------SSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE
T ss_pred EEEEEEc--c--CCCEEEE--CCEEccCC--------CCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEE
Confidence 9999997 3 8899999 88887432 233468899999999999999998544 7665 56778887
Q ss_pred ecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCC
Q psy2145 409 SKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTE 488 (808)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (808)
.+|.+...
T Consensus 182 ~~p~~~~~------------------------------------------------------------------------ 189 (265)
T 2oz4_A 182 YGPRLDER------------------------------------------------------------------------ 189 (265)
T ss_dssp EEEECCGG------------------------------------------------------------------------
T ss_pred eCCccccc------------------------------------------------------------------------
Confidence 66543210
Q ss_pred CCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECC
Q psy2145 489 PHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSH 568 (808)
Q Consensus 489 ~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~ 568 (808)
..+.+ ..+.+|+.+.|.|.+ .|.|.|.+.|+|+|..+.... .|. .
T Consensus 190 -------------------~~p~~-~~v~~g~~~~l~C~~--~g~P~p~i~W~~~~~~~~~~g-----------~~~--~ 234 (265)
T 2oz4_A 190 -------------------DCPGN-WTWPENSQQTPMCQA--WGNPLPELKCLKDGTFPLPIG-----------ESV--T 234 (265)
T ss_dssp -------------------GSCSE-EEEETTCEECCCCCC--EEESCCEEEEEETTTEECCTT-----------SCE--E
T ss_pred -------------------cCCCc-cEEcCCCeEEEEeEC--ccCCCCeEEEEECCcccCCCC-----------cEE--E
Confidence 00001 147889999999998 899999999999998332221 122 3
Q ss_pred CCCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 569 VRAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
++.+|+|.|+|.|.|..|..+.++.|.|..
T Consensus 235 v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 235 VTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 778999999999999999999999999974
No 94
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.96 E-value=1.9e-29 Score=266.39 Aligned_cols=276 Identities=12% Similarity=0.130 Sum_probs=181.7
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...|. ..+.+|++++|.|.+ .+. .+.+.|+|+|..+...... .... ..|.|.+++.+|+|.|+|.|
T Consensus 22 ~~~P~i~~~p~-~~v~~G~~v~L~C~~--~~~-~~~~~W~k~g~~~~~~~~~--~~~~--~~L~I~~v~~~D~G~Y~C~a 93 (316)
T 3vh8_G 22 QDKPFLSAWPS-AVVPRGGHVTLRCHY--RHR-FNNFMLYKEDRIHIPIFHG--RIFQ--ESFNMSPVTTAHAGNYTCRG 93 (316)
T ss_dssp --CCEEEEESC-SEEETTSCEEEEEEB--TTB-CCSEEEEESSCSSSCHHHH--CCBS--SCEEECSCCGGGCEEEEEEE
T ss_pred CCCCEeeccCC-CccCCCCCEEEEEEc--cCC-CceEEEEeCCCccceeecC--Ccce--EEEEECCCCcccCeEEEEEE
Confidence 56888988887 568899999999999 344 6789999999876432111 1111 27999999999999999999
Q ss_pred EeCc-----eeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEE
Q psy2145 261 VNAL-----GQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHF 335 (808)
Q Consensus 261 ~n~~-----g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l 335 (808)
.|.. +..+..+.|.|.... .+|.+...+... +.+|+.++|
T Consensus 94 ~~~~~~~~~~~~s~~~~l~V~~~~----------------------------------~~p~~~~~~~~~-v~~G~~v~L 138 (316)
T 3vh8_G 94 SHPHSPTGWSAPSNPVVIMVTGNH----------------------------------RKPSLLAHPGPL-VKSGERVIL 138 (316)
T ss_dssp BCSSSSSSBCCCCCCEEEEEECSS----------------------------------CCCEEEEESCSE-EETTCCEEE
T ss_pred EcCCCCcceecCCCcEEEEEecCC----------------------------------CCCeEEecCCCc-cCCCCeEEE
Confidence 8632 233445677775421 245555444433 889999999
Q ss_pred EEEEeecCCCccEEEEEECCEeccCCCcEEEEe-eCcEEEEEEccCCCCCCeEEEEEEEcCCcce-----EEEEEEEEEe
Q psy2145 336 EARLIPVGDSKLKVTWLRNGVPIQASNRVSTMH-DFGYVALNFKYTYPEDSGTYTCRAVNELGEA-----VTSSTLFVES 409 (808)
Q Consensus 336 ~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~~ 409 (808)
.|.+ . .+.+.+.|+++|..+.......... ......|.|.++..+|+|.|+|.|.|..|.. .....|.|..
T Consensus 139 ~C~~--~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 139 QCWS--D-IMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp EEEE--S-SCCSEEEEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred EEcC--C-CCCcEEEEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC
Confidence 9998 3 4567899999998775432211111 1233479999999999999999999988742 2335566653
Q ss_pred cccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCC
Q psy2145 410 KASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEP 489 (808)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (808)
.+
T Consensus 216 ~~------------------------------------------------------------------------------ 217 (316)
T 3vh8_G 216 PY------------------------------------------------------------------------------ 217 (316)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred CC------------------------------------------------------------------------------
Confidence 21
Q ss_pred CCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeC-cEEEEEECC
Q psy2145 490 HKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDF-GYVAMDLSH 568 (808)
Q Consensus 490 ~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~-~~~~L~I~~ 568 (808)
.+|.+...... .+.+|+.++|.|.+ . .|.+.+.|+|+|..+...........+ ....|.|.+
T Consensus 218 ------------~~p~i~~~~~~--~v~~G~~v~L~C~~--~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~ 280 (316)
T 3vh8_G 218 ------------EKPSLSAQPGP--KVQAGESVTLSCSS--R-SSYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGP 280 (316)
T ss_dssp ------------CCCEEEEESCS--CCCTTSCCEEEEEE--S-SCCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-
T ss_pred ------------CCCeEEeCCCC--eecCCCcEEEEEEC--C-CCCcEEEEEECCCcCCCceeceeccCCceeEEEEcCC
Confidence 12333333222 47899999999998 4 578899999999877532211111111 224799999
Q ss_pred CCCCCCEEEEEEEEeCCee-----EEEEEEEEEEec
Q psy2145 569 VRAEDEGIYICKATNALGE-----AVTTASMKIKTK 599 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~-----~~~s~~l~V~~~ 599 (808)
++ |+|.|+|.|.|..+. .+..+.|.|...
T Consensus 281 v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 314 (316)
T 3vh8_G 281 AT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGN 314 (316)
T ss_dssp ------CEEEEEEEBTTBTTEECCCCCCEEC-----
T ss_pred cC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCC
Confidence 99 999999999998763 344466666553
No 95
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.96 E-value=7.9e-28 Score=234.20 Aligned_cols=190 Identities=31% Similarity=0.532 Sum_probs=166.0
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC--CeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS--RITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
..+|.|..++.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+.... ++.....++...|.|.+++.+|+|.|+
T Consensus 3 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 79 (194)
T 2a38_A 3 TQAPTFTQPLQSV-VVLEGSTATFEAHI--SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYS 79 (194)
T ss_dssp CEEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCCCeEEccCCce-EEECCCEEEEEEEE--EecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEE
Confidence 3578899888876 68999999999999 788999999999999987764 666767777789999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.|.|..|....++.|.|..... +|.+...+. ...+.+|+.+.|.|
T Consensus 80 C~~~n~~~~~~~~~~l~v~~~~~---------------------------------~p~~~~~~~-~~~~~~g~~~~l~C 125 (194)
T 2a38_A 80 LKATNGSGQATSTAELLVKAETA---------------------------------PPNFVQRLQ-SMTVRQGSQVRLQV 125 (194)
T ss_dssp EEEEETTEEEEEEEEEEEECCCE---------------------------------EEEEEECCC-CEEECTTEEEEEEE
T ss_pred EEEEcCCceEeEEEEEEEccCCC---------------------------------CCEEEeCCc-cEEEcCCCEEEEEE
Confidence 99999999999888888875211 244444433 35688999999999
Q ss_pred EEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 659 RVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.+ .|.|.|.|.|++||..+..+.++.+..++...+|.|.++..+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 126 ~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 126 RV--TGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EE--EEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EE--EEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 99 7999999999999999999999999888888899999999999999999999999999999999884
No 96
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.96 E-value=2.6e-28 Score=239.51 Aligned_cols=201 Identities=20% Similarity=0.296 Sum_probs=150.7
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeC--cEEEEEECCCCCCCCEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDF--GYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~--~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
+|.|..++.. .+.+|+.+.|.|.+. .+.|.|.|+|+|||++|..+.++.+..+. +.++|.|.+++.+|+|.|+|.
T Consensus 3 ~p~~~~~~~~--~v~eg~~v~l~c~~~-~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 3 DPFTKSELAV--EILEKGQVRFWMQAE-KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp ---CCEEEEE--EECGGGCEEEEEECS-CCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCeeecCCce--EEEeCCeEEEEEEEe-cCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 6788887753 589999999999983 45899999999999999988888777665 777899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRV 660 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v 660 (808)
|.| |.+...+.+.+.......+.. ..+ ...... ....+|.|...+. ..+.+|+.++|.|.+
T Consensus 80 a~N--g~a~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-------------~~~~~P~~~~~~~--~~v~~g~~v~l~C~v 140 (207)
T 3rbs_A 80 LQD--GKATNHSTVVLVGDVFKKLQK-EAE-FQRQEW-------------IRKQGPHFVEYLS--WEVTGECNVLLKCKV 140 (207)
T ss_dssp EEE--TTEEEEEEEEECTHHHHHHHH-HHH-HHHHHH-------------HHHTSSEEEEEEE--EEEETTTEEEEEEEE
T ss_pred EEC--CCeEEEEEEEEEccchhhhcc-ccc-cccccc-------------ccCCCCceEecCC--cEEcCCCcEEEEEEE
Confidence 999 555555554432110000000 000 000000 0012588887763 578999999999999
Q ss_pred eeCCC-CCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 661 VPVGD-PTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 661 ~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.|. |.|.|+|+|||.+|..+.++.. ..+..+|.|.++..+|+|.|+|.|.|.+|.+++++.|.++
T Consensus 141 --~g~~P~p~i~W~k~g~~l~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 141 --ANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 206 (207)
T ss_dssp --ESCCTTCEEEEEETTEEECCCCCCCC--SSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECCC
T ss_pred --eCCCCCCEEEEEECCEECCCCCceEc--CCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEecC
Confidence 798 9999999999999988776532 3455689999999999999999999999999999998764
No 97
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.95 E-value=3.5e-27 Score=230.29 Aligned_cols=192 Identities=23% Similarity=0.405 Sum_probs=163.3
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCC-CCeEEE-eeCcEEEEEECCCCCCCCEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDS-SRITTK-HDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~-~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
.+|.|...+.+. .+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+... .++.+. ..++...|.|.+++.+|+|.|+|
T Consensus 3 ~~P~~~~~~~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEELRNL-NVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECCCCE-EEETTSCEEEEEEE--ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcCCcc-EEcCCCEEEEEEEE--eecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 478999888776 68999999999999 79999999999999998764 455554 34666789999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|.|..|....++.|.|...+.+.. |.+...+ ....+.+|+.+.|.|.
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~~-------------------------------~~~~~~~-~~~~~~~g~~~~l~C~ 127 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIHL-------------------------------PKTLEGM-GAVHALRGEVVSIKIP 127 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEECC-------------------------------SSCBTTB-EEEEEETTCCCEEEEE
T ss_pred EEEECCCceeEEEEEEEcCCCcCCC-------------------------------Ccccccc-CeEEEeCCCEEEEEEE
Confidence 9999999999999999987655321 2211111 1235778999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEcc-CCCCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITK-CVPADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
+ .|.|.|.|.|+++|..+..+.++.+.......+|.|.+ +..+|+|.|+|.|.|.+|..+.++.|.|.+
T Consensus 128 ~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 128 F--SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVAD 197 (197)
T ss_dssp E--EEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred E--EecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEeC
Confidence 9 79999999999999999988999988877888999999 999999999999999999999999999863
No 98
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.95 E-value=2.3e-27 Score=231.47 Aligned_cols=193 Identities=21% Similarity=0.385 Sum_probs=168.6
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
+..+|.|...+.+. .+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+..+.++.+..+++..+|.|.+++.+|+|.|+|
T Consensus 4 ~~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (197)
T 3lcy_A 4 SGEAPGIRKEMKDV-TTKLGEAAQLSCQI--VGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTC 80 (197)
T ss_dssp CCEEEEEEECCCCE-EEETTSEEEEEEEE--EEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEE
T ss_pred cCCCCcccccCCce-EEeCCCcEEEEEEE--ecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEE
Confidence 34688998888877 68999999999999 6899999999999999998889888888888899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|.|..|....++.|.|...|.+.... .......+.+|+.+.|.|.
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~p~~~~~~----------------------------------~~~~~~~~~~g~~~~l~C~ 126 (197)
T 3lcy_A 81 IATNEVGEVETSSKLLLQATPQFHPGY----------------------------------PLKEKYYGAVGSTLRLHVM 126 (197)
T ss_dssp EEECSSCEEEEEEEEEEEEEEEECTTS----------------------------------CCCSEEEEETTSCEEEEEE
T ss_pred EEECCCCceeEEEEEEEEcCCCCCCCc----------------------------------cCCcceeecCCCeEEEEEE
Confidence 999999999999999998765432100 0111234678999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCC-CCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVP-ADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
+ .|.|.|.|.|++||..+..+.++.+...+....|.|.++.. +|+|.|+|.|.|.+|..+.++.|.|.++
T Consensus 127 ~--~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 127 Y--IGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp E--EEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred E--eeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEecC
Confidence 9 79999999999999999999999998888888999999995 8999999999999999999999999764
No 99
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.95 E-value=2.3e-27 Score=253.55 Aligned_cols=290 Identities=13% Similarity=0.168 Sum_probs=182.1
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee-----------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT-----------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||+ |..+. ...|+.+..+ .+..+|.
T Consensus 4 l~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (344)
T 1za6_B 4 LVQSGAE-VVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVE 82 (344)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred eeCCCCe-EEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEE
Confidence 4456677 89999999999999853224678999996 43321 2457777655 4667999
Q ss_pred EcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK 191 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 191 (808)
|.+++.+|+|.|+|.|.|..+.....+.|.|.... ..+|.+...+.
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~~~~~ 128 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS----------------------------------TKGPSVFPLAP 128 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSC----------------------------------CBCCEEEEECC
T ss_pred ECCCCcccCEEEEEEEecCcceecCcEEEEEecCC----------------------------------CCCCeEEEccc
Confidence 99999999999999999865544455677775311 24566665554
Q ss_pred ceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEecCc----eEEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 192 NCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETNNFG----FVALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 192 ~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
...+.+|+.++|.|.+.+ ..|. +.|.|+|+|..+...........++ ...|.|.++..+| |.|+|.|.|..|.
T Consensus 129 ~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~ 206 (344)
T 1za6_B 129 SSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSN 206 (344)
T ss_dssp SCTTTSSSEEEEEEEEEE-EBSSCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGGT
T ss_pred cccccCCCcEEEEEEEee-EECCCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCCC
Confidence 556789999999999953 2354 7999999998642110000111111 1269999998878 9999999998886
Q ss_pred EEEEEEEEEeeCCccccccc----ccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeec
Q psy2145 267 AVTSGNLLVHSKKSIQTETQ----HGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPV 342 (808)
Q Consensus 267 ~~~~~~l~V~~~~~i~~~~~----~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~ 342 (808)
......+.+... +....- .+..+. .......+|.+..........+|+.+.|.|.+ .
T Consensus 207 ~~~~~~~~~~v~--~~~~~~~~~~~~~~l~---------------~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~--~ 267 (344)
T 1za6_B 207 TKVDKKVEPKSC--DKTHTCPPCGGGSSGG---------------GSGGQPREPQVYTLPPSRDELTKNQVSLTCLV--K 267 (344)
T ss_dssp EEEEEEECCCCC-------------------------------------CCBCCEEEEECCCGGGGGSSSEEEEEEE--E
T ss_pred ccceEeeccccc--ccccccCCCCCCcccc---------------ccCCCCcCCEEEEeCCChHhccCCcEEEEEEE--e
Confidence 544333321100 000000 000000 00001235554433222223356679999999 5
Q ss_pred C-CC-ccEEEEEECCEeccCCCcEE--EEeeCcE---EEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 343 G-DS-KLKVTWLRNGVPIQASNRVS--TMHDFGY---VALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 343 g-~p-~~~v~W~~~g~~l~~~~~~~--~~~~~~~---~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
| .| .+.|+|+|||..+....... ...++.+ ..|.|.....+|+|.|+|.|.|....
T Consensus 268 g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 268 GFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp EEBSSCCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred eEECCCeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 5 34 47999999999886432211 1222222 34667666667899999999997643
No 100
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.95 E-value=1e-26 Score=228.07 Aligned_cols=195 Identities=21% Similarity=0.326 Sum_probs=149.9
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeC--CeEEEEEcccCcCCCeeEEEEEEecCc
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDF--GYVALDIIDTIPEDSGTYTCRAVNLVG 132 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~--~~~~L~I~~~~~~D~G~Y~C~a~n~~g 132 (808)
.+.++ .+.+|+.+.|.|.+.. +.|.+.|.|||||++|..+.++.+..+. +..+|.|.+++.+|+|.|+|.|.| |
T Consensus 8 ~~~~~-~v~eg~~v~l~c~~~~-~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N--g 83 (207)
T 3rbs_A 8 SELAV-EILEKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD--G 83 (207)
T ss_dssp EEEEE-EECGGGCEEEEEECSC-CCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE--T
T ss_pred cCCce-EEEeCCeEEEEEEEec-CCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC--C
Confidence 34456 8999999999999975 5799999999999999998888877665 777899999999999999999999 6
Q ss_pred ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCC
Q psy2145 133 FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSD 212 (808)
Q Consensus 133 ~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~ 212 (808)
.+.....+.+........ .......... .....+|.|...+ +..+.+|+.++|.|.+ .+.
T Consensus 84 ~a~~~~~~~~~~~~~~~~--------------~~~~~~~~~~---~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v--~g~ 143 (207)
T 3rbs_A 84 KATNHSTVVLVGDVFKKL--------------QKEAEFQRQE---WIRKQGPHFVEYL-SWEVTGECNVLLKCKV--ANI 143 (207)
T ss_dssp TEEEEEEEEECTHHHHHH--------------HHHHHHHHHH---HHHHTSSEEEEEE-EEEEETTTEEEEEEEE--ESC
T ss_pred CeEEEEEEEEEccchhhh--------------cccccccccc---cccCCCCceEecC-CcEEcCCCcEEEEEEE--eCC
Confidence 666665554321100000 0000000000 0012478888877 5789999999999999 577
Q ss_pred -CCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 213 -NTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 213 -p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
|.+.|+|+|||.+|..+.++ ....+..+|.|.++..+|+|.|+|.|.|..|.+.+++.|.+
T Consensus 144 ~P~p~i~W~k~g~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 144 KKETHIVWYKDEREISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CTTCEEEEEETTEEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CCCCEEEEEECCEECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 89999999999999876654 23445668999999999999999999999999999998875
No 101
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.95 E-value=6e-26 Score=224.35 Aligned_cols=196 Identities=22% Similarity=0.372 Sum_probs=157.9
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEee-CcEEEEEECCC-CCCCCEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHD-FGYVAMDLSHV-RAEDEGIYIC 579 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v-~~~D~G~Y~C 579 (808)
.+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+..+........ +....|.|.++ +.+|+|.|+|
T Consensus 5 ~~P~~~~~p~~~-~v~~G~~v~L~C~~--~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTPVDQ-TGVSGGVASFICQA--TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCccee-EEecCCeEEEEEEE--eeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 488999888886 68999999999999 6899999999999999976544333322 34568999999 5999999999
Q ss_pred EEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|.|..|....++.|.|...+.+. ...|.+...+. ...+.+|+.+.|.|.
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~-----------------------------~~~p~~~~~~~-~~~~~~g~~v~l~C~ 131 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIP-----------------------------RGFPTIDMGPQ-LKVVERTRTATMLCA 131 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCC-----------------------------TTCCEEEECCC-CEEEETTSCEEEEEE
T ss_pred EEEcCCCcEEEEEEEEEeccCccC-----------------------------CCcceeecCCc-ceeEecCCCEEEEEE
Confidence 999999999999999998754321 02355655443 346888999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCC---CcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE-EEEEEEEeCC
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMG---SRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVS-STSLKVKSKS 732 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~---~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~p 732 (808)
+ .|.|.|.|.|++||..+..+ .++.+........|.|.++..+|+|.|+|.|+|.+|...+ .+.|.|...+
T Consensus 132 ~--~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~ 206 (212)
T 2yd6_A 132 A--SGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTK 206 (212)
T ss_dssp E--ECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred e--cCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEecc
Confidence 9 79999999999999999864 5677777777889999999999999999999999998865 4788887664
No 102
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.95 E-value=3.5e-26 Score=222.55 Aligned_cols=190 Identities=30% Similarity=0.477 Sum_probs=166.7
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC--ceEEEecCceEEEEEccCCCCCcEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS--RFTETNNFGFVALDIMQCLPEDSGVYTC 258 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 258 (808)
..+|.|...+.+..+.+|++++|.|.+ .+.|.+.+.|+|+|..+.... ++.....++..+|.|.+++.+|+|.|+|
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 3 TQAPTFTQPLQSVVVLEGSTATFEAHI--SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEE--EEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEccCCceEEECCCEEEEEEEE--EecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 458899999999999999999999999 467788999999999987654 5666666677799999999999999999
Q ss_pred EEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 259 RAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 259 ~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
.|.|..|....++.|.|.... .+|.+...+....+.+|+.+.|.|.
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~~----------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~ 126 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAET----------------------------------APPNFVQRLQSMTVRQGSQVRLQVR 126 (194)
T ss_dssp EEEETTEEEEEEEEEEEECCC----------------------------------EEEEEEECCCCEEECTTEEEEEEEE
T ss_pred EEEcCCceEeEEEEEEEccCC----------------------------------CCCEEEeCCccEEEcCCCEEEEEEE
Confidence 999999988888888886421 3566776677788999999999999
Q ss_pred EeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
+ .|.|.+.+.|+++|..+..+.++.+..++...+|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 127 ~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 127 V--TGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELLVQ 194 (194)
T ss_dssp E--EEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred E--EEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCCceEEEEEEEEC
Confidence 9 7889999999999999998888888888888899999999999999999999999999888888874
No 103
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.94 E-value=1e-25 Score=222.80 Aligned_cols=193 Identities=30% Similarity=0.462 Sum_probs=158.2
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecC-CCCCeEEEe-eCcEEEEEECCCCC-CCCEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLE-DSSRITTKH-DFGYVAMDLSHVRA-EDEGIYI 578 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~-~~~~~~~~~-~~~~~~L~I~~v~~-~D~G~Y~ 578 (808)
.||.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+. ...++.+.. .++...|.|.++.. +|+|.|+
T Consensus 5 ~pP~~~~~p~~~-~v~~G~~v~l~C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKPQNQ-GVRVGGVASFYCAA--RGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECCCCE-EEETTSCEEEEEEE--ECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCCCce-EEecCCEEEEEEEE--ccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 589999988887 68999999999999 789999999999999997 456666553 35567899999999 9999999
Q ss_pred EEEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 579 CKATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 579 C~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
|.|.|..|. ...++.|.|...+... ...|.|...+. ...+.+|+.+.|.
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~-----------------------------~~~p~~~~~~~-~~~~~~g~~v~l~ 131 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTP-----------------------------AGFPVITQGPG-TRVIEVGHTVLMT 131 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSC-----------------------------TTCCEEEECCC-CEEEETTCCEEEC
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCC-----------------------------CCCCeeEeCCC-ceEeecCCeEEEE
Confidence 999999998 7888899998653210 01366665543 3568899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCC-CcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE-EEEEEEeCCC
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKMG-SRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSS-TSLKVKSKSD 733 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s-~~l~V~~~p~ 733 (808)
|.+ .|.|.|.|.|++||..+..+ .++.+. ++ .|.|.++..+|+|.|+|.|.|.+|...+. +.|.|+....
T Consensus 132 C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~--~~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~~ 203 (212)
T 2yd1_A 132 CKA--IGNPTPNIYWIKNQTKVDMSNPRYSLK--DG--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRRV 203 (212)
T ss_dssp CEE--ECSSCCEEEEEETTEECCTTSTTEEEE--TT--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred EEe--ccCCCCeEEEEECCeEcccCCCeEEcc--CC--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEeccc
Confidence 999 79999999999999999864 455432 33 89999999999999999999999999875 8999997754
No 104
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=3.7e-27 Score=249.51 Aligned_cols=259 Identities=16% Similarity=0.266 Sum_probs=166.7
Q ss_pred CeEEEEEEEeecCC-C-ccEEEEEECCEeccCCCcE-EEEeeCcE----EEEEEccCCCCCCeEEEEEEEcCCcceEEEE
Q psy2145 331 QAAHFEARLIPVGD-S-KLKVTWLRNGVPIQASNRV-STMHDFGY----VALNFKYTYPEDSGTYTCRAVNELGEAVTSS 403 (808)
Q Consensus 331 ~~~~l~C~~~~~g~-p-~~~v~W~~~g~~l~~~~~~-~~~~~~~~----~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~ 403 (808)
+.+.|.|.+ .|. | .+.|+|+|||.++..+... ....+++. ..|.|..+..+|+|.|+|.|.|..|.....+
T Consensus 25 ~~v~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 102 (323)
T 2wqr_A 25 PTIQLLCLV--SGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDST 102 (323)
T ss_dssp SEEEEEEEE--EEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEE--eCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceee
Confidence 699999999 453 4 5899999999998755322 11122332 3578888888899999999999876543222
Q ss_pred EEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcc
Q psy2145 404 TLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRK 483 (808)
Q Consensus 404 ~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (808)
.+.+..
T Consensus 103 ~~~~~~-------------------------------------------------------------------------- 108 (323)
T 2wqr_A 103 KKCADS-------------------------------------------------------------------------- 108 (323)
T ss_dssp CCCCCS--------------------------------------------------------------------------
T ss_pred ecCCCC--------------------------------------------------------------------------
Confidence 110000
Q ss_pred cccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCC-CCCc---EEEEEECC-EecCCCCCeEEEee
Q psy2145 484 LEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVG-DPTL---KVEWFRNE-KPLEDSSRITTKHD 558 (808)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~~---~v~W~k~g-~~l~~~~~~~~~~~ 558 (808)
....++.|+.++... .+.+|+.+.|.|.+ .| .|.+ .|+|+|++ ..+...........
T Consensus 109 ---------------~~~~p~v~~~~p~~~-~v~~G~~v~L~C~~--~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~ 170 (323)
T 2wqr_A 109 ---------------NPRGVSAYLSRPSPF-DLFIRKSPTITCLV--VDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQR 170 (323)
T ss_dssp ---------------SGGGCEEEECCCCHH-HHHTSSCCEEEEEE--EEECCCSSCCEEEEEETTCCCCCCCCCEEEECT
T ss_pred ---------------CCCCCEEEEcCCCHH-HhccCCeEEEEEEE--eccCCCCCceEEEEEECCCcccccccCCCccCC
Confidence 000122233333322 47899999999998 45 4555 89999974 55543322221111
Q ss_pred C----cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccC
Q psy2145 559 F----GYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYE 634 (808)
Q Consensus 559 ~----~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~ 634 (808)
. ....|.|.++..+|+|.|+|.|.|..+.... .+.|..... ...
T Consensus 171 ~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~--~~~v~~~~~------------------------------~~~ 218 (323)
T 2wqr_A 171 NGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRAL--MRSTTKTSG------------------------------PRA 218 (323)
T ss_dssp TSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCE--EEEECCCCS------------------------------CCB
T ss_pred CCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCe--eeEEEccCC------------------------------CCC
Confidence 1 1237999999999999999999998754332 333321100 012
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCC-CCC-eEEEEEECCEEccCCCcEEE----EEeCC----EEEEEEccCCCC
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVG-DPT-MRFEWFVNGVELKMGSRFHV----QHDFG----YVTLDITKCVPA 704 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~-p~i~W~~~g~~l~~~~~~~~----~~~~~----~~~L~I~~v~~~ 704 (808)
+|.+.........+ +|+.++|.|.+ .| .|. +.|.|+|||.+|..+. +.. ...++ .+.|.|..+..+
T Consensus 219 ~P~v~~~~~~~~~~-~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~ 294 (323)
T 2wqr_A 219 APEVYAFATPEWPG-SRDKRTLACLI--QNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWE 294 (323)
T ss_dssp CCEEEEEECCCCTT-CTTEEEEEEEE--EEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHH
T ss_pred CCEEEEeCCChHHh-cCCcEEEEEEe--eeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHcc
Confidence 46555443332233 49999999999 56 444 3899999999987542 211 11111 357999999999
Q ss_pred CcEEEEEEEEeCCcc
Q psy2145 705 DSGVYMCKAINRAGE 719 (808)
Q Consensus 705 D~G~Y~C~A~N~~G~ 719 (808)
|+|.|+|.|.|..+.
T Consensus 295 d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 295 QKDEFICRAVHEAAS 309 (323)
T ss_dssp HCCCEEEEEECTTST
T ss_pred CCCEEEEEEEeCCCC
Confidence 999999999999887
No 105
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.94 E-value=1.9e-25 Score=216.62 Aligned_cols=179 Identities=26% Similarity=0.420 Sum_probs=150.2
Q ss_pred CCCeeeecCCCcccccC-CCceEEEEEEeeCCCCC--cEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEE-GKNAHFSCRLIPVGDPT--LKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~-G~~v~l~C~v~~~g~P~--~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
.||.+..+... .+.+ |+.+.|.|.+ .+.|. +.+.|+|+|..+..+.... ....|.|.+++.+|+|.|+
T Consensus 2 ~~P~i~~~~~~--~v~~~G~~v~l~C~~--~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~ 72 (190)
T 2wv3_A 2 NEPRIVTSEEV--IIRDSLLPVTLQCNL--TSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYH 72 (190)
T ss_dssp -CCEEEECCCE--ECCCSSSCEEEEEEE--EECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEE
T ss_pred CCCcccccceE--EEccCCceEEEEEEe--ccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEE
Confidence 36777775443 3556 9999999999 56776 8899999999998765432 3348999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.|.|. |....++.|.|... |.+..... ...+.+|+.+.|.|
T Consensus 73 C~~~n~-~~~~~~~~l~V~~~------------------------------------p~~~~~~~-~~~~~~g~~v~l~C 114 (190)
T 2wv3_A 73 CVYHFV-SAPKANATIEVKAA------------------------------------PDITGHKR-SENKNEGQDAMMYC 114 (190)
T ss_dssp EEEEET-TEEEEEEEEEEECC------------------------------------CEEEEECS-EEEEETTSCEEEEE
T ss_pred EEEEeC-CcccccEEEEEecC------------------------------------CcccccCC-cceeeCCCcEEEEE
Confidence 999999 99999999999864 44444332 34688999999999
Q ss_pred EEeeCCCCCeEEEEEE--CCEEcc---CCCcEEEEEeCCEEEEEEccCC-CCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 659 RVVPVGDPTMRFEWFV--NGVELK---MGSRFHVQHDFGYVTLDITKCV-PADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~--~g~~l~---~~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.+ .|.|.|.|.|++ +|..+. .+.++.+..+++..+|.|.++. .+|+|.|+|.|.|.+|..+.++.|.|+
T Consensus 115 ~~--~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 115 KS--VGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EE--ECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred Ee--CccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 99 799999999999 898876 5778888888888899999999 799999999999999999999999986
No 106
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=221.11 Aligned_cols=195 Identities=19% Similarity=0.245 Sum_probs=156.3
Q ss_pred cCCCceEEEEEEeeCC-CCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEE
Q psy2145 517 EEGKNAHFSCRLIPVG-DPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMK 595 (808)
Q Consensus 517 ~~G~~v~l~C~v~~~g-~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~ 595 (808)
-.|+.+.|.|.+ .+ .|.+.|+|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 15 c~~~~~~l~C~~--~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 15 STAEGIQLYSFV--TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp ECSSEEEEEEEB--SSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EcCceEEEEEEE--eccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 368888999998 56 568999999999999999999888888888899999999999999999999999888777776
Q ss_pred EEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEEC
Q psy2145 596 IKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVN 675 (808)
Q Consensus 596 V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~ 675 (808)
|...+..... .+.+... ......+|.+.........+.+|+.+.|.|.+ .|.|.|.|.|+||
T Consensus 93 v~~~~~~~~~---------~~~~~~~-------~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~--~g~p~p~v~W~~~ 154 (212)
T 2r15_A 93 GQAYDEAYAE---------FQRLKQA-------AIAEKNRARVLGGLPDVVTIQEGKALNLTCNV--WGDPPPEVSWLKN 154 (212)
T ss_dssp HHHHHHHHHH---------HHHHHHH-------HHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE--ECSSCCEEEEEET
T ss_pred Eeeccchhhh---------ccccCcc-------cccccCCCcccccCCCcEEEccCCeEEEEEEE--cCCCCceEEEEEC
Confidence 5431110000 0000000 00001136666665555678999999999999 7999999999999
Q ss_pred CEEccCCCcEEEEEe-CCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 676 GVELKMGSRFHVQHD-FGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 676 g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
|.++..+.++.+... ++.+.|.|.++..+|+|.|+|.|.|.+|..+.++.|.|..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~P 211 (212)
T 2r15_A 155 EKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFIP 211 (212)
T ss_dssp TEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEcc
Confidence 999999999988776 67889999999999999999999999999999999999754
No 107
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.94 E-value=1.1e-26 Score=245.87 Aligned_cols=263 Identities=13% Similarity=0.191 Sum_probs=169.3
Q ss_pred CcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcE-EEEeeCCe----EEEEEcccCcCCCeeEEEEEEecCcceEEEEEE
Q psy2145 66 GHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRF-RPIHDFGY----VALDIIDTIPEDSGTYTCRAVNLVGFAEVQATL 140 (808)
Q Consensus 66 ~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~-~~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 140 (808)
+.++|.|.+.+...+.+.|.|+|||..|..+... ....+++. ..|.|.++..+|+|.|+|+|.|..+.....+.+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 6999999998632235799999999998765432 11222332 258888888899999999999987654333221
Q ss_pred EEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCe---EE
Q psy2145 141 QCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTM---KV 217 (808)
Q Consensus 141 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~---~v 217 (808)
.+.. ....++.+...+....+.+|++++|.|.+.+ ..|.+ .|
T Consensus 105 ~~~~----------------------------------~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g-~~P~p~~~~i 149 (323)
T 2wqr_A 105 CADS----------------------------------NPRGVSAYLSRPSPFDLFIRKSPTITCLVVD-LAPSKGTVQL 149 (323)
T ss_dssp CCCS----------------------------------SGGGCEEEECCCCHHHHHTSSCCEEEEEEEE-ECCCSSCCEE
T ss_pred CCCC----------------------------------CCCCCEEEEcCCCHHHhccCCeEEEEEEEec-cCCCCCceEE
Confidence 0000 0022334455566667889999999999953 23444 99
Q ss_pred EEeeCC-EEccCCCceEEEecC----ceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhh
Q psy2145 218 EWFHNN-VPIKSGSRFTETNNF----GFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLS 292 (808)
Q Consensus 218 ~W~~~g-~~l~~~~~~~~~~~~----~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~ 292 (808)
.|+|++ ..+............ ....|.|.++..+|+|.|+|.|.|..+... +.+.|....
T Consensus 150 ~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~--~~~~v~~~~------------- 214 (323)
T 2wqr_A 150 TWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRA--LMRSTTKTS------------- 214 (323)
T ss_dssp EEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC--EEEEECCCC-------------
T ss_pred EEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCC--eeeEEEccC-------------
Confidence 999964 554433222211111 123799999999999999999999764332 234442100
Q ss_pred hhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC-CCc-cEEEEEECCEeccCCCcEE----E
Q psy2145 293 RLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG-DSK-LKVTWLRNGVPIQASNRVS----T 366 (808)
Q Consensus 293 ~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g-~p~-~~v~W~~~g~~l~~~~~~~----~ 366 (808)
....+|.+...+.......|+.+.|.|.+ .| .|. +.|.|+|||.+|..+.... .
T Consensus 215 ------------------~~~~~P~v~~~~~~~~~~~g~~~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 274 (323)
T 2wqr_A 215 ------------------GPRAAPEVYAFATPEWPGSRDKRTLACLI--QNFMPEDISVQWLHNEVQLPDARHSTTQPRK 274 (323)
T ss_dssp ------------------SCCBCCEEEEEECCCCTTCTTEEEEEEEE--EEEBSSCCEEEEEETTEECCGGGEEECCCEE
T ss_pred ------------------CCCCCCEEEEeCCChHHhcCCcEEEEEEe--eeeeCCCcEEEEEECCEECCCCceeecCccc
Confidence 01124544322222122239999999999 45 443 4899999999986542111 1
Q ss_pred EeeCc---EEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 367 MHDFG---YVALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 367 ~~~~~---~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
..++. ...|.|..+..+|+|.|+|.|.|..+.
T Consensus 275 ~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 275 TKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp CSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred CCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 11221 246999999999999999999998876
No 108
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.94 E-value=2.6e-25 Score=215.87 Aligned_cols=183 Identities=27% Similarity=0.501 Sum_probs=154.6
Q ss_pred CCeeeecCCC-cccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 503 RPVFTKPLQN-IDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 503 ~P~f~~~~~~-~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
||.|...... ...+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+....++.+..... .|.|.+++.+|+|.|+|.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRA--SGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEE--ECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEee--ccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEE
Confidence 6777766553 2368899999999999 789999999999999999888877665444 7999999999999999999
Q ss_pred EeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEe
Q psy2145 582 TNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVV 661 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~ 661 (808)
.|..|.....+.|.|...|. +.... ...+.+|+.+.|.|.+
T Consensus 78 ~~~~~~~~~~~~l~V~~~p~------------------------------------~~~~~--~~~~~~g~~v~l~C~~- 118 (192)
T 2va4_A 78 TNKAGEDEKQAFLQVFVQPH------------------------------------IIQLK--NETTYENGQVTLVCDA- 118 (192)
T ss_dssp EETTEEEEEEEEEEEEEEEE------------------------------------EEEEC--CEEECTTSEEEEEEEE-
T ss_pred EccccccceEEEEEEEccCc------------------------------------ccccC--cceEEeCCeEEEEEEe-
Confidence 99999999889999876533 32221 2356779999999999
Q ss_pred eCCCCCeEEEEEEC--CEEccC-----CCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 662 PVGDPTMRFEWFVN--GVELKM-----GSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 662 ~~g~P~p~i~W~~~--g~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.|.|.+.|.|+++ |..+.. +.++.+....+..+|.|.++..+|+|.|+|.|.|.+|..+.++.|.|+
T Consensus 119 -~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 119 -EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp -EEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -cCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 7899999999999 777764 457777777788899999999999999999999999999999999884
No 109
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.94 E-value=2.6e-26 Score=245.30 Aligned_cols=282 Identities=15% Similarity=0.206 Sum_probs=176.4
Q ss_pred CceEeecCCeEEEEEEEeecCC--CccEEEEEEC--CEecc-----------------CCCcEEEEee--CcEEEEEEcc
Q psy2145 323 RDIHVAENQAAHFEARLIPVGD--SKLKVTWLRN--GVPIQ-----------------ASNRVSTMHD--FGYVALNFKY 379 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g~--p~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~ 379 (808)
....+.+|+.+.|.|.+ .+. +.+.|.|+|+ |..+. ...|+.+..+ ++..+|.|.+
T Consensus 8 ~~~~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 8 GAEVVKPGASVKISCKA--SGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp CCEEECTTCCEEEEEEE--ESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCeEEeCCCcEEEEEEc--CCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 45678999999999999 554 4688999996 43321 1357776654 4567899999
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEEecccccccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCc
Q psy2145 380 TYPEDSGTYTCRAVNELGEAVTSSTLFVESKASLQLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPT 459 (808)
Q Consensus 380 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 459 (808)
+..+|+|.|+|.|.|..+.....+.|.|...+.
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~----------------------------------------------- 118 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAST----------------------------------------------- 118 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSCC-----------------------------------------------
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCCC-----------------------------------------------
Confidence 999999999999999655444456677753110
Q ss_pred eeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCC-CC-cE
Q psy2145 460 ELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD-PT-LK 537 (808)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~-~~ 537 (808)
.+|.+....... .+.+|+.++|.|.+ .|. |. +.
T Consensus 119 ------------------------------------------~~P~i~~~~~~~-~~~~g~~v~L~C~~--~g~~P~~~~ 153 (344)
T 1za6_B 119 ------------------------------------------KGPSVFPLAPSS-KSTSGGTAALGCLV--KDYFPEPVT 153 (344)
T ss_dssp ------------------------------------------BCCEEEEECCSC-TTTSSSEEEEEEEE--EEEBSSCCC
T ss_pred ------------------------------------------CCCeEEEccccc-cccCCCcEEEEEEE--eeEECCCeE
Confidence 122222211121 36789999999999 565 65 79
Q ss_pred EEEEECCEecCC---------CCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccC
Q psy2145 538 VEWFRNEKPLED---------SSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQH 608 (808)
Q Consensus 538 v~W~k~g~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~ 608 (808)
|+|+|+|..+.. +.++.. ...|.|.++..+| |.|+|.|.|..|.......+.+... +......
T Consensus 154 v~W~k~g~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~--~~~~~~~ 225 (344)
T 1za6_B 154 VSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSC--DKTHTCP 225 (344)
T ss_dssp EEETTTTBCTTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC---------
T ss_pred EEEecCCccCceeECCCeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeeccccc--ccccccC
Confidence 999999986421 122221 1269999999888 9999999999987654444332110 0000000
Q ss_pred cccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-C-CeEEEEEECCEEccCCCcEE
Q psy2145 609 PEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-P-TMRFEWFVNGVELKMGSRFH 686 (808)
Q Consensus 609 p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P-~p~i~W~~~g~~l~~~~~~~ 686 (808)
+ ......-........+|.+........ ..+|..++|.|.+ .|. | .+.|.|+|||..+.......
T Consensus 226 ~----------~~~~~~l~~~~~~~~~P~v~~~~~~~~-~~~~~~~~L~C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~ 292 (344)
T 1za6_B 226 P----------CGGGSSGGGSGGQPREPQVYTLPPSRD-ELTKNQVSLTCLV--KGFYPSDIAVEWESNGQPENNYKTTP 292 (344)
T ss_dssp -----------------------CCBCCEEEEECCCGG-GGGSSSEEEEEEE--EEEBSSCCEEEEESSSSCCCSEEECC
T ss_pred C----------CCCCccccccCCCCcCCEEEEeCCChH-hccCCcEEEEEEE--eeEECCCeEEEEEECCeECCCcEecc
Confidence 0 000000000001123566655543322 3346679999999 674 4 47999999999886543222
Q ss_pred EE--EeCCE---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 687 VQ--HDFGY---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 687 ~~--~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+. .++.+ +.|.|.....+|+|.|+|.|.|....
T Consensus 293 ~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l~ 330 (344)
T 1za6_B 293 PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 330 (344)
T ss_dssp CEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTST
T ss_pred eEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCCC
Confidence 21 12222 35667666667899999999998654
No 110
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.94 E-value=2.4e-25 Score=217.24 Aligned_cols=191 Identities=21% Similarity=0.336 Sum_probs=162.7
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCC-CceEEE-ecCceEEEEEccCCCCCcEEEEEE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSG-SRFTET-NNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~-~~~~~~-~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
.+|.|...+.+..+.+|++++|.|.+ .+.|.+.+.|+|+|..+... .++... ..++..+|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEE--ECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEE--eecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 58999999999999999999999999 57888999999999998754 455544 356677999999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
|.|..|....++.|.|..++.+ ..|.+...+....+.+|+.+.|.|.+
T Consensus 81 ~~n~~g~~~~~~~l~V~~~p~~--------------------------------~~~~~~~~~~~~~~~~g~~~~l~C~~ 128 (197)
T 2j8h_A 81 ATNQGGSVSGTASLEVEVPAKI--------------------------------HLPKTLEGMGAVHALRGEVVSIKIPF 128 (197)
T ss_dssp EEETTEEEEEEEEEEEEEEEEE--------------------------------CCSSCBTTBEEEEEETTCCCEEEEEE
T ss_pred EEECCCceeEEEEEEEcCCCcC--------------------------------CCCccccccCeEEEeCCCEEEEEEEE
Confidence 9999999888899998764422 12333333455678899999999999
Q ss_pred eecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEcc-CCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKY-TYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~-v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
.|.|.+.+.|+++|..+..+.++.+.......+|.|.+ +..+|+|.|+|.|.|..|....++.|.|.
T Consensus 129 --~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 129 --SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp --EEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred --EecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcEeEEEEEEEe
Confidence 68899999999999999888888877776777999999 99999999999999999999888888885
No 111
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.94 E-value=1.4e-26 Score=225.79 Aligned_cols=170 Identities=12% Similarity=0.112 Sum_probs=132.4
Q ss_pred cccCCCceEEEEEEee-CCCCCcEEEEEECCEecCC-----------------CCCeEEEeeCcEEEEEECCCCCCCCEE
Q psy2145 515 AVEEGKNAHFSCRLIP-VGDPTLKVEWFRNEKPLED-----------------SSRITTKHDFGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~-~g~P~~~v~W~k~g~~l~~-----------------~~~~~~~~~~~~~~L~I~~v~~~D~G~ 576 (808)
++..|+.++|+|.+.. .+.|.+.|+|+|+|..+.. ..++.+..+.+...|.|.+++.+|+|.
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 83 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGN 83 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeE
Confidence 5789999999995310 6789999999998754321 234555566777899999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEE
Q psy2145 577 YICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHY 656 (808)
Q Consensus 577 Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l 656 (808)
|+|.|.|..|..+..+.|.|..+ |.+...+ ....+.+|+.++|
T Consensus 84 Y~C~a~n~~g~~~~~~~l~V~~p------------------------------------~~~~~~~-~~~~v~~g~~~~l 126 (203)
T 4fa8_A 84 YLCRMKLGETEVTKQEHLSVVKP------------------------------------LTLSVHS-ERSQFPDFSVLTV 126 (203)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEE------------------------------------EEEEEEE-EECCSSCSCCEEE
T ss_pred EEEEEEcCCCcEEEEEEEEecCC------------------------------------ceeeecc-eeEEEcCCCEEEE
Confidence 99999999999999999999864 3333332 2356889999999
Q ss_pred EEEEeeCCCCCeEEEEEECCEEcc----CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 657 DCRVVPVGDPTMRFEWFVNGVELK----MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 657 ~C~v~~~g~P~p~i~W~~~g~~l~----~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
.|.+ .|.|.|.|+|++++..+. .+.++.+..++....|.|.++..+|+|.|+|.|+|.+|++...
T Consensus 127 ~C~~--~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~v 195 (203)
T 4fa8_A 127 TCTV--NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHGV 195 (203)
T ss_dssp EEEE--EEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEEE
T ss_pred EEEc--CCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEEE
Confidence 9999 799999999998765442 3556777666667788889999999999999999999998753
No 112
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.93 E-value=1.3e-24 Score=214.79 Aligned_cols=196 Identities=22% Similarity=0.338 Sum_probs=159.5
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEe-cCceEEEEEccC-CCCCcEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETN-NFGFVALDIMQC-LPEDSGVYTC 258 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~L~I~~~-~~~D~G~Y~C 258 (808)
..+|.|...+.+..+.+|+++.|.|.+ .+.|.+.|.|+|+|..+..+....... +.....|.|.++ ..+|+|.|+|
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~--~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQA--TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEE--EEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEE--eeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 468999999999999999999999999 467888999999999997654433332 234557999999 5999999999
Q ss_pred EEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 259 RAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 259 ~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
.|.|..|....++.|.|...+.+ ....|.+...+....+.+|+.+.|.|.
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~------------------------------~~~~p~~~~~~~~~~~~~g~~v~l~C~ 131 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQI------------------------------PRGFPTIDMGPQLKVVERTRTATMLCA 131 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGC------------------------------CTTCCEEEECCCCEEEETTSCEEEEEE
T ss_pred EEEcCCCcEEEEEEEEEeccCcc------------------------------CCCcceeecCCcceeEecCCCEEEEEE
Confidence 99999999888889998753211 113467777777778899999999999
Q ss_pred EeecCCCccEEEEEECCEeccCC---CcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEec
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQAS---NRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESK 410 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~---~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 410 (808)
+ .|.|.+.|.|+++|..+... .++....+.....|.|.++..+|+|.|+|.|.|..|...++ +.|.|...
T Consensus 132 ~--~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~ 205 (212)
T 2yd6_A 132 A--SGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGT 205 (212)
T ss_dssp E--ECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred e--cCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEec
Confidence 9 79999999999999998764 46666666667799999999999999999999999988765 88888754
No 113
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.93 E-value=7.4e-25 Score=213.56 Aligned_cols=191 Identities=20% Similarity=0.347 Sum_probs=165.1
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.++.+.+|+++.|.|.+ .+.|.+.+.|+|+|..+....++....+++..+|.|.++..+|+|.|+|.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQI--VGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEE--EEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEE--ecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 568999999999999999999999999 467888999999999999888888888888889999999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEe
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLI 340 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~ 340 (808)
.|..|.....+.|.|...+.+. +. ........+.+|+.+.|.|.+
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~---------------------------------~~-~~~~~~~~~~~g~~~~l~C~~- 127 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFH---------------------------------PG-YPLKEKYYGAVGSTLRLHVMY- 127 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEEC---------------------------------TT-SCCCSEEEEETTSCEEEEEEE-
T ss_pred ECCCCceeEEEEEEEEcCCCCC---------------------------------CC-ccCCcceeecCCCeEEEEEEE-
Confidence 9999998888888887643211 00 011234567899999999999
Q ss_pred ecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCC-CCCeEEEEEEEcCCcceEEEEEEEEEe
Q psy2145 341 PVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYP-EDSGTYTCRAVNELGEAVTSSTLFVES 409 (808)
Q Consensus 341 ~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~-~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 409 (808)
.|.|.+.+.|+++|..+..+.++.+...+....|.|.++.. +|+|.|+|.|.|..|....++.|.|.+
T Consensus 128 -~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 128 -IGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp -EEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred -eeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcCceEEEEEEEEec
Confidence 78999999999999999988888888777777999999995 899999999999999999889998875
No 114
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.93 E-value=8.6e-26 Score=219.34 Aligned_cols=185 Identities=26% Similarity=0.468 Sum_probs=152.0
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC-CCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-SSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
..+|.|..++.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+.. ..++.+..++. .|.|.+++.+|+|.|+|
T Consensus 5 ~~~P~i~~~~~~~-~~~~G~~v~l~C~~--~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C 79 (192)
T 2iep_A 5 PKAPVITTPLETV-DALVEEVATFMCAV--ESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCC 79 (192)
T ss_dssp CEEEEESSCCCEE-EEETTSCEEEECCE--EEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEE
T ss_pred CCCceeecCccce-eeeCCCcEEEEeeC--CCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEE
Confidence 3468888877765 68999999999999 6889999999999999875 45666665544 79999999999999999
Q ss_pred EEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 580 KATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 580 ~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
.+.|..|. ....+.|.|...|. +..... ...+.+|+.+.|.|
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~~p~------------------------------------~~~~~~-~~~~~~g~~~~l~C 122 (192)
T 2iep_A 80 TANNGVGGAVESCGALQVKMKPK------------------------------------ITRPPI-NVKIIEGLKAVLPC 122 (192)
T ss_dssp EEECSSSCCEEEEEEEEEEEEEE------------------------------------EEECCC-CEEEETTSCEEECC
T ss_pred EEEcCCCceeEeEEEEEEEeCCc------------------------------------cccCCc-ceEEeCCCcEEEEE
Confidence 99999887 55667888876533 333222 34678999999999
Q ss_pred EEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceE-EEEEEEEEeCC
Q psy2145 659 RVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAV-SSTSLKVKSKS 732 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~-~s~~l~V~~~p 732 (808)
.+ .|.|.+.|.|+++|..+..+.++.+..++ .|.|.++..+|+|.|+|.|.|..|... .++.|.|..+|
T Consensus 123 ~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 123 TT--MGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp EE--EEESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EE--eccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 99 79999999999999999988887665433 699999999999999999999999884 46899998764
No 115
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.93 E-value=2.6e-24 Score=212.60 Aligned_cols=190 Identities=26% Similarity=0.429 Sum_probs=158.2
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee-ccCcEEEEee-CCeEEEEEcccCc-CCCeeEEE
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT-IGHRFRPIHD-FGYVALDIIDTIP-EDSGTYTC 125 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~-~~~r~~~~~~-~~~~~L~I~~~~~-~D~G~Y~C 125 (808)
.+.++..|.++ .+.+|++++|.|.+. +.|.+.|.|+|+|..+. ...++.+... ++..+|.|.++.. +|+|.|+|
T Consensus 6 pP~~~~~p~~~-~v~~G~~v~l~C~~~--g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 82 (212)
T 2yd1_A 6 PPEIIRKPQNQ-GVRVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYEC 82 (212)
T ss_dssp CCEEEECCCCE-EEETTSCEEEEEEEE--CSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEE
T ss_pred CCEEEcCCCce-EEecCCEEEEEEEEc--cCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEE
Confidence 46667788888 899999999999998 57888999999999997 5667776543 5567999999999 99999999
Q ss_pred EEEecCcc-eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEE
Q psy2145 126 RAVNLVGF-AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFE 204 (808)
Q Consensus 126 ~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~ 204 (808)
.|.|..|. ....+.|.|...... ...+|.|...+....+.+|+.+.|.
T Consensus 83 ~~~n~~g~~~~~~~~l~V~~~~~~-------------------------------~~~~p~~~~~~~~~~~~~g~~v~l~ 131 (212)
T 2yd1_A 83 VAENGVGDAVSADATLTIYEGDKT-------------------------------PAGFPVITQGPGTRVIEVGHTVLMT 131 (212)
T ss_dssp EEECSSSCEEEEEEEEEEECTTCS-------------------------------CTTCCEEEECCCCEEEETTCCEEEC
T ss_pred EEEeCCCCeEEeeEEEEEecccCC-------------------------------CCCCCeeEeCCCceEeecCCeEEEE
Confidence 99999998 778888888754221 1335888888888899999999999
Q ss_pred EEEeecCCCCeEEEEeeCCEEccCC-CceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEE-EEEEEeeC
Q psy2145 205 CRLIPVSDNTMKVEWFHNNVPIKSG-SRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTS-GNLLVHSK 278 (808)
Q Consensus 205 C~~~~~~~p~~~v~W~~~g~~l~~~-~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 278 (808)
|.+ .+.|.+.|.|+++|..+... .++... + + +|.|.++..+|+|.|+|.|.|..|...+. +.|.|...
T Consensus 132 C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~-~-~--~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~ 201 (212)
T 2yd1_A 132 CKA--IGNPTPNIYWIKNQTKVDMSNPRYSLK-D-G--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVR 201 (212)
T ss_dssp CEE--ECSSCCEEEEEETTEECCTTSTTEEEE-T-T--EEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEe--ccCCCCeEEEEECCeEcccCCCeEEcc-C-C--eEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEec
Confidence 999 58888999999999999763 444333 2 3 89999999999999999999999998765 89999864
No 116
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.93 E-value=5.9e-25 Score=214.05 Aligned_cols=178 Identities=17% Similarity=0.310 Sum_probs=145.6
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeC-CCCCcEEEEEECCEecCCCC--CeEEEeeCc-------EEEEEECCCCC
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPV-GDPTLKVEWFRNEKPLEDSS--RITTKHDFG-------YVAMDLSHVRA 571 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~-g~P~~~v~W~k~g~~l~~~~--~~~~~~~~~-------~~~L~I~~v~~ 571 (808)
++|.|+..+.+. .+.+|+.+.|.|.+ . |.|.+.|.|+|||..+.... ++.+..... ...|.|.+++.
T Consensus 1 e~~~~~~~p~~~-~v~~G~~v~l~C~~--~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 77 (195)
T 2c5d_C 1 EESPFVGNPGNI-TGARGLTGTLRCQL--QVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQL 77 (195)
T ss_dssp -CCSEEECCCCE-EECTTCCEEEEEEE--EEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCS
T ss_pred CCCeeccChhhe-EEecCCcEEEeccc--ccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccc
Confidence 378899888887 68999999999999 6 89999999999999998763 344433221 45899999999
Q ss_pred CCCEEEEEEEEeCCeeEEEE-EEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 572 EDEGIYICKATNALGEAVTT-ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s-~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
+|+|.|+|.|.|..|..... +.|.|... |.|...+. ...+.+
T Consensus 78 ~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~------------------------------------p~~~~~~~-~~~~~~ 120 (195)
T 2c5d_C 78 SDTGQYQCLVFLGHQTFVSQPGYVGLEGL------------------------------------PYFLEEPE-DRTVAA 120 (195)
T ss_dssp TTCEEEEEEEEETTEEEECCCEEEEECCS------------------------------------CEEEECCC-CEEECT
T ss_pred cCCcEEEEEEEeCCCceecccEEEEEecC------------------------------------CeEEcCCC-cEEEcC
Confidence 99999999999998876544 77777653 54544333 256889
Q ss_pred CceEEEEEEEeeCCCCCe-EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceE-EEEEEEE
Q psy2145 651 GQSAHYDCRVVPVGDPTM-RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAV-SSTSLKV 728 (808)
Q Consensus 651 G~~v~l~C~v~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~-~s~~l~V 728 (808)
|+.+.|.|.+ .|.|.| .|.|++||..+...... ....+|.|.++. |+|.|+|.|.|.+|... .++.|.|
T Consensus 121 g~~~~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 121 NTPFNLSCQA--QGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp TCCEEEEEEE--ECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCEEEEEeEC--CCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999999999 799999 99999999999876543 334589999988 89999999999999996 6999998
No 117
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.93 E-value=3.7e-24 Score=207.48 Aligned_cols=177 Identities=27% Similarity=0.397 Sum_probs=148.5
Q ss_pred ecCCCCccccCC-CCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecC
Q psy2145 53 VTKPKSIENLRE-RGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLV 131 (808)
Q Consensus 53 ~~~p~~~~~v~~-G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 131 (808)
+..+..+ .+.+ |+.++|.|.+.+.+.|.+.|.|+|+|..+..+.+.. ....|.|.+++.+|+|.|+|.|.|.
T Consensus 6 i~~~~~~-~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~~n~- 78 (190)
T 2wv3_A 6 IVTSEEV-IIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVYHFV- 78 (190)
T ss_dssp EEECCCE-ECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEEEET-
T ss_pred ccccceE-EEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEEEeC-
Confidence 3345555 5667 999999999995322338999999999988664432 3458999999999999999999999
Q ss_pred cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecC
Q psy2145 132 GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVS 211 (808)
Q Consensus 132 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~ 211 (808)
|....++.|.|. .+|.+...+....+.+|+.+.|.|.+ .+
T Consensus 79 ~~~~~~~~l~V~--------------------------------------~~p~~~~~~~~~~~~~g~~v~l~C~~--~g 118 (190)
T 2wv3_A 79 SAPKANATIEVK--------------------------------------AAPDITGHKRSENKNEGQDAMMYCKS--VG 118 (190)
T ss_dssp TEEEEEEEEEEE--------------------------------------CCCEEEEECSEEEEETTSCEEEEEEE--EC
T ss_pred CcccccEEEEEe--------------------------------------cCCcccccCCcceeeCCCcEEEEEEe--Cc
Confidence 888888888884 46778888888889999999999999 58
Q ss_pred CCCeEEEEee--CCEEcc---CCCceEEEecCceEEEEEccCC-CCCcEEEEEEEEeCceeEEEEEEEEEe
Q psy2145 212 DNTMKVEWFH--NNVPIK---SGSRFTETNNFGFVALDIMQCL-PEDSGVYTCRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 212 ~p~~~v~W~~--~g~~l~---~~~~~~~~~~~~~~~L~I~~~~-~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 276 (808)
.|.+.+.|++ +|..+. ...++.+..+++..+|.|.++. .+|+|.|+|.|.|..|....++.|.|.
T Consensus 119 ~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 119 YPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCCcceeEEEEEEE
Confidence 8899999999 888775 5667777777777789999999 799999999999999999999988885
No 118
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.93 E-value=9.8e-25 Score=220.35 Aligned_cols=198 Identities=23% Similarity=0.444 Sum_probs=151.6
Q ss_pred cCCCeeeecCC---CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCe---EEEeeCcEEEEEECCCCCCCC
Q psy2145 501 KQRPVFTKPLQ---NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRI---TTKHDFGYVAMDLSHVRAEDE 574 (808)
Q Consensus 501 ~~~P~f~~~~~---~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~---~~~~~~~~~~L~I~~v~~~D~ 574 (808)
..+|.|+.+.. ....+.+|+++.|.|.+ .|.|.+.|.|+|+|..+....++ .... +..+|.|.+++.+|+
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~v~~~d~ 84 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPA--AGNPTPSISWLKNGREFRGEHRIGGIKLRH--QQWSLVMESVVPSDR 84 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCE--ECSSCCEEEEEETTEECCGGGSTTCCEEEG--GGTEEEECSCCGGGC
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEe--cCCCCceeEEEECCcccCCCCcccceeeec--cceEEEEEeCCcccC
Confidence 34788876652 23368899999999999 78999999999999998765432 3332 233799999999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceE
Q psy2145 575 GIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSA 654 (808)
Q Consensus 575 G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 654 (808)
|.|+|.|.|..|....++.|.|...+. .+|.+.........+.+|+.+
T Consensus 85 G~Y~C~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~~~~~~~~~~~~~~g~~v 132 (241)
T 3grw_A 85 GNYTCVVENKFGSIRQTYTLDVLERSP--------------------------------HRPILQAGLPANQTAVLGSDV 132 (241)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCC--------------------------------CCCEEEECTTCSEECCTTCCE
T ss_pred EEEEEEEeecCCceEEEEEEEEeccCC--------------------------------CCceeecCCCccceecCCCEE
Confidence 999999999999999999999876432 135555555555678899999
Q ss_pred EEEEEEeeCCCCCeEEEEEE----CCEEccCCCcEEEEE--------eCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE
Q psy2145 655 HYDCRVVPVGDPTMRFEWFV----NGVELKMGSRFHVQH--------DFGYVTLDITKCVPADSGVYMCKAINRAGEAVS 722 (808)
Q Consensus 655 ~l~C~v~~~g~P~p~i~W~~----~g~~l~~~~~~~~~~--------~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 722 (808)
.|.|.+ .|.|.+.|.|++ ||..+..+....... .....+|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 133 ~L~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~ 210 (241)
T 3grw_A 133 EFHCKV--YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEK 210 (241)
T ss_dssp EEEEEE--ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred EEEEEE--ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEEE
Confidence 999999 799999999999 999887654432211 013468999999999999999999999999999
Q ss_pred EEEEEEEeCCCccc
Q psy2145 723 STSLKVKSKSDIVS 736 (808)
Q Consensus 723 s~~l~V~~~p~~~~ 736 (808)
++.|.|..+|.+..
T Consensus 211 ~~~l~V~~~p~~~~ 224 (241)
T 3grw_A 211 AFWLSVHGPRAAEE 224 (241)
T ss_dssp EEEEEC--------
T ss_pred EEEEEecCCCCCCc
Confidence 99999998876544
No 119
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.93 E-value=6.2e-25 Score=212.60 Aligned_cols=182 Identities=20% Similarity=0.454 Sum_probs=142.4
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC--CCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED--SSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
+|.|...+.+. .+.+|+.+.|.|.+ .+.|.+.+.|+|++..+.. ..++....++ .|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~~~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~ 75 (189)
T 2v5t_A 2 MLTFREVVSPQ-EFKQGEDAEVVCRV--SSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCE 75 (189)
T ss_dssp CCEEEECCSSE-EEETTSCEEECCEE--ECSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEE
T ss_pred CceeeccCCCE-EEeCCCcEEEEEEE--cCCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEE
Confidence 57888888877 68999999999999 7889999999999988764 3455444332 699999999999999999
Q ss_pred EEeCCeeEE--EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC-CccccCCceEEEE
Q psy2145 581 ATNALGEAV--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG-TSEIMEGQSAHYD 657 (808)
Q Consensus 581 a~N~~G~~~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~-~~~v~~G~~v~l~ 657 (808)
|.|..+... ..+.|.|...|.+ ...... ...+.+|+.+.|.
T Consensus 76 ~~~~~~~~~~~~~~~l~v~~~p~~------------------------------------~~~~~~~~~~~~~g~~v~l~ 119 (189)
T 2v5t_A 76 GRVEARGEIDFRDIIVIVNVPPAI------------------------------------SMPQKSFNATAERGEEMTFS 119 (189)
T ss_dssp EEETTTTEEEEEEEEEEEEEEEEE------------------------------------ECSCCEEEEETTSCCCEEEE
T ss_pred EEEcCCCceEEEEEEEEecCCCCc------------------------------------ccccccccccccCCCcEEEE
Confidence 999875443 4455666554332 111110 2357789999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
|.+ .|.|.|.|.|++||..+..+.++.+..++ .+|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 120 C~~--~g~p~~~v~W~~~g~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 120 CRA--SGSPEPAISWFRNGKLIEENEKYILKGSN--TELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp CEE--EEESCCEEEEEETTEECCCSSSEEEETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEE--ccCCCCeEEEEECCEECcCCCcEEEecCC--CEEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 999 78999999999999999988887765443 3899999999999999999999999999999999864
No 120
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.92 E-value=2.2e-25 Score=217.22 Aligned_cols=171 Identities=12% Similarity=0.076 Sum_probs=135.3
Q ss_pred CccccCCCCcEEEEEEEee-CCCCCceEEEEeCCEEee-----------------ccCcEEEEeeCCeEEEEEcccCcCC
Q psy2145 58 SIENLRERGHAHFECKLEP-VTDSNLKVEWFKNGRPVT-----------------IGHRFRPIHDFGYVALDIIDTIPED 119 (808)
Q Consensus 58 ~~~~v~~G~~v~l~C~~~~-~~~p~~~v~W~~~g~~l~-----------------~~~r~~~~~~~~~~~L~I~~~~~~D 119 (808)
++ ++..|+.++|.|.+.. .+.|.+.|.|||+|..+. ...++.+..+.+..+|.|.+++.+|
T Consensus 2 ~V-ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AV-TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CC-EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred Ce-EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 44 7889999999997542 256889999999874321 1235566667788899999999999
Q ss_pred CeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCC
Q psy2145 120 SGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQ 199 (808)
Q Consensus 120 ~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~ 199 (808)
+|.|+|+|.|..|.....+.|.|. .||.+...+....+.+|+
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~--------------------------------------~p~~~~~~~~~~~v~~g~ 122 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVV--------------------------------------KPLTLSVHSERSQFPDFS 122 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEE--------------------------------------EEEEEEEEEEECCSSCSC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEec--------------------------------------CCceeeecceeEEEcCCC
Confidence 999999999999999999999884 367777788888899999
Q ss_pred eEEEEEEEeecCCCCeEEEEeeCCEEcc----CCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE
Q psy2145 200 RAHFECRLIPVSDNTMKVEWFHNNVPIK----SGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT 269 (808)
Q Consensus 200 ~v~L~C~~~~~~~p~~~v~W~~~g~~l~----~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 269 (808)
+++|.|.+ .|.|.|.|+|++++..+. .+.++.+..++....|.|.++..+|+|.|+|.|+|..|.+..
T Consensus 123 ~~~l~C~~--~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 123 VLTVTCTV--NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CEEEEEEE--EEESCCEEEECCC------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred EEEEEEEc--CCCCCCEEEEEECCeeecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 99999999 578999999998765442 345666666665566788899999999999999999998764
No 121
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.92 E-value=2.8e-24 Score=208.05 Aligned_cols=179 Identities=23% Similarity=0.500 Sum_probs=144.1
Q ss_pred eeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEE-CCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEe
Q psy2145 505 VFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFR-NEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATN 583 (808)
Q Consensus 505 ~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 583 (808)
.|..++.+. .+.+|+.+.|.|.+ .+.|. .+.|+| +|..+....++.+..+++...|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~-~v~~G~~v~L~C~~--~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 4 QVTISLSKV-ELSVGESKFFTCTA--IGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEEESCSEE-EEETTCCEEEEEEE--EECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCCce-EEecCCcEEEEEEe--ecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEe
Confidence 345555555 68999999999999 67777 999999 88999888899888888788999999999999999999999
Q ss_pred CCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEee
Q psy2145 584 ALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVP 662 (808)
Q Consensus 584 ~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~ 662 (808)
..|.. +..+.|.|... |.+...+. ...+.+|+.+.|.|.+
T Consensus 80 ~~g~~~~~~~~l~v~~~------------------------------------p~~~~~~~-~~~~~~g~~~~l~C~~-- 120 (189)
T 2v44_A 80 AKGQTQEATVVLEIYQK------------------------------------LTFREVVS-PQEFKQGEDAEVVCRV-- 120 (189)
T ss_dssp TTSCEEEEEEEEEEECC------------------------------------CEEESCCC-SEEEETTSCEEECCEE--
T ss_pred CCCCcEEEEEEEEEecC------------------------------------CceeecCC-cEEEeCCCCEEEEEEE--
Confidence 98876 56677777654 33332222 3468899999999999
Q ss_pred CCCCCeEEEEEECCEEcc--CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 663 VGDPTMRFEWFVNGVELK--MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 663 ~g~P~p~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.|.|.|.|.|+++|..+. .+.++.+..++ .|.|.++..+|+|.|+|.|.|.+|....+..+.|.
T Consensus 121 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 121 SSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI 186 (189)
T ss_dssp ECSSCCEEEEEEEC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE
T ss_pred CcCCCCcEEEEECCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeeeEEEE
Confidence 799999999999999886 35566554332 79999999999999999999999887766655554
No 122
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.92 E-value=8e-25 Score=219.28 Aligned_cols=199 Identities=24% Similarity=0.424 Sum_probs=153.7
Q ss_pred ccCCCeeeecCC---CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCe---EEEeeCcEEEEEECCCCCCC
Q psy2145 500 TKQRPVFTKPLQ---NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRI---TTKHDFGYVAMDLSHVRAED 573 (808)
Q Consensus 500 ~~~~P~f~~~~~---~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~---~~~~~~~~~~L~I~~v~~~D 573 (808)
...+|.|..++. ....+.+|+++.|.|.+ .|.|.+.|.|+|+|..+....++ .... +...|.|.+++.+|
T Consensus 12 ~~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d 87 (231)
T 3ojm_B 12 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPA--GGNPMPTMRWLKNGKEFKQEHRIGGYKVRN--QHWSLIMESVVPSD 87 (231)
T ss_dssp -CEEEEESCGGGGCCSCEEEETTSCEEEECCE--EEESCCEEEEEETTEECCGGGSTTCCEEEG--GGTEEEECSCCGGG
T ss_pred CccCCccccccccCceeEEEccCCCEEEEEec--ccCCCCeEEEEECCccccccccccceeeec--CcceEEEecCCccc
Confidence 445788877662 23368999999999999 78899999999999998765443 2322 23379999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
+|.|+|.|.|..|....++.|.|...+.. +|.+.........+.+|+.
T Consensus 88 ~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~--------------------------------~p~~~~~~~~~~~~~~g~~ 135 (231)
T 3ojm_B 88 KGNYTCVVENEYGSINHTYHLDVVERSRH--------------------------------RPILQAGLPANASTVVGGD 135 (231)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECCCCC--------------------------------CCEECTTCSCCEEEETTCC
T ss_pred CEEEEEEEecccCcccccEEEEEEcCCCC--------------------------------CCceeeccCCceEEEeCCc
Confidence 99999999999999999999999864321 2444333334456889999
Q ss_pred EEEEEEEeeCCCCCeEEEEEE----CCEEccCCCcEE--EEEeC-----CEEEEEEccCCCCCcEEEEEEEEeCCcceEE
Q psy2145 654 AHYDCRVVPVGDPTMRFEWFV----NGVELKMGSRFH--VQHDF-----GYVTLDITKCVPADSGVYMCKAINRAGEAVS 722 (808)
Q Consensus 654 v~l~C~v~~~g~P~p~i~W~~----~g~~l~~~~~~~--~~~~~-----~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 722 (808)
+.|.|.+ .|.|.|.|.|++ ||..+..+.... ..... ...+|.|.++..+|+|.|+|.|.|..|..+.
T Consensus 136 ~~l~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 213 (231)
T 3ojm_B 136 VEFVCKV--YSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQ 213 (231)
T ss_dssp EEEECCE--ECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEEEE--ecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEee
Confidence 9999999 799999999999 898886554322 12111 1247999999999999999999999999999
Q ss_pred EEEEEEEeCCCccc
Q psy2145 723 STSLKVKSKSDIVS 736 (808)
Q Consensus 723 s~~l~V~~~p~~~~ 736 (808)
++.|.|..+|..+.
T Consensus 214 ~~~l~V~~~p~~p~ 227 (231)
T 3ojm_B 214 SAWLTVLPKQQAPG 227 (231)
T ss_dssp EEEEEEECCC----
T ss_pred EEEEEEecCCCCCc
Confidence 99999998876543
No 123
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.92 E-value=9.6e-24 Score=208.41 Aligned_cols=195 Identities=17% Similarity=0.195 Sum_probs=151.2
Q ss_pred cCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEE
Q psy2145 62 LRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQ 141 (808)
Q Consensus 62 v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 141 (808)
..+|+.+.|.|.+.+ ..|.+.|.|+|+|..|..+.++.+..+++..+|.|.+++.+|+|.|+|.|.|..|....++.|.
T Consensus 14 ~c~~~~~~l~C~~~~-~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~ 92 (212)
T 2r15_A 14 QSTAEGIQLYSFVTY-YVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92 (212)
T ss_dssp EECSSEEEEEEEBSS-CCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEC
T ss_pred EEcCceEEEEEEEec-cCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEE
Confidence 457788888888875 2568899999999999999999988888888999999999999999999999888777666665
Q ss_pred EecCCCccccccccccceeeeeecccccccccccc-ccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEe
Q psy2145 142 CRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYI-EETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWF 220 (808)
Q Consensus 142 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~ 220 (808)
|......... ....... ......|+.+...+....+.+|+.+.|.|.+ .+.|.+.+.|+
T Consensus 93 v~~~~~~~~~------------------~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~--~g~p~p~v~W~ 152 (212)
T 2r15_A 93 GQAYDEAYAE------------------FQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV--WGDPPPEVSWL 152 (212)
T ss_dssp HHHHHHHHHH------------------HHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEE--ECSSCCEEEEE
T ss_pred Eeeccchhhh------------------ccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEE--cCCCCceEEEE
Confidence 5321000000 0000000 0000134444445666889999999999999 58899999999
Q ss_pred eCCEEccCCCceEEEec-CceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 221 HNNVPIKSGSRFTETNN-FGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 221 ~~g~~l~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
|+|..+..+.++.+... ++..+|.|.+++.+|+|.|+|.|.|..|....++.|.|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 153 KNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp ETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 99999998888777665 5677999999999999999999999999999999998864
No 124
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.92 E-value=1e-23 Score=204.49 Aligned_cols=182 Identities=24% Similarity=0.389 Sum_probs=144.2
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCC-CcEEEEEE-CCEecC-CCCCeEEEe-eCcEEEEEECCCCCCCCEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-TLKVEWFR-NEKPLE-DSSRITTKH-DFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~~~v~W~k-~g~~l~-~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
|+.|...+.+. .+.+|+.+.|.|.+ .+.| .+.+.|+| ||..+. ...++.... +.+...|.|.+++.+|+|.|+
T Consensus 2 p~~v~~~p~~~-~v~~G~~v~l~C~~--~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 78 (191)
T 1epf_A 2 VLQVDIVPSQG-EISVGESKFFLCQV--AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYK 78 (191)
T ss_dssp -CCEEEESSSE-EEETTCCEEEEEEE--CCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred ceEEEecCCCc-EEcCCCCEEEEEEC--CCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEE
Confidence 45666666666 68999999999999 6766 89999999 998887 445665543 355668999999999999999
Q ss_pred EEEEeCC-eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 579 CKATNAL-GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 579 C~a~N~~-G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
|.|.|.. +.....+.|.|... |.+...+. ...+.+|+.+.|.
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~~------------------------------------p~~~~~~~-~~~~~~g~~~~l~ 121 (191)
T 1epf_A 79 CVVTAEDGTQSEATVNVKIFQK------------------------------------LMFKNAPT-PQEFKEGEDAVIV 121 (191)
T ss_dssp EEEEETTTEEEEEEEEEEEECC------------------------------------SEEEECCS-SEECCTTSCEEEC
T ss_pred EEEEcCCCcceEEEEEEEeecC------------------------------------ceEecCCC-cEeecCCCeEEEE
Confidence 9999998 66667777777653 44443332 3568899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccC--CCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKM--GSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
|.+ .|.|.|.|.|+++|..+.. +.++.+..+ + .|.|.++..+|+|.|+|.|.|.+|.......+.|.
T Consensus 122 C~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 122 CDV--VSSLPPTIIWKHKGRDVILKKDVRFIVLSN-N--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp CEE--ECSSCCEEEEEETTEEGGGGCCTTEEECTT-S--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred EEE--CCCCCCEEEEEECCEEeeccCCceEEEecC-C--eEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 999 6999999999999999874 335544332 2 69999999999999999999999877777777664
No 125
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.92 E-value=3e-24 Score=206.49 Aligned_cols=176 Identities=16% Similarity=0.318 Sum_probs=139.7
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCc--EEEEEECCCCCCCCEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFG--YVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~--~~~L~I~~v~~~D~G~Y~C~ 580 (808)
+|.|...+.+. .+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+....+.....+.. ...|.|.+++.+|+|.|+|.
T Consensus 2 ~~~~~~~p~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 78 (182)
T 1rhf_A 2 GLKLMGAPVKL-TVSQGQPVKLNCSV--EGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQ 78 (182)
T ss_dssp -----CCCEEE-EEETTCCEEEEEEE--ESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCcce-EEeCCCcEEEEEEE--eCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEE
Confidence 46677777665 68999999999999 689999999999999998876665554432 35899999999999999999
Q ss_pred EEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 581 ATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 581 a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
|.|..|. .+..+.|.|... |.+...+. ...+.+|+.+.|.|.
T Consensus 79 ~~~~~~~~~~~~~~l~V~~~------------------------------------p~~~~~~~-~~~~~~g~~~~l~C~ 121 (182)
T 1rhf_A 79 VEDGGETEISQPVWLTVEGV------------------------------------PFFTVEPK-DLAVPPNAPFQLSCE 121 (182)
T ss_dssp ESSCTTCEECCCEEEEEECS------------------------------------CEEEECCC-CEEECTTCCEEEEEE
T ss_pred EEcCCCcEEEEEEEEEEecC------------------------------------CeEEecCc-ceEecCCCEEEEEeE
Confidence 9999775 445688888754 44444433 256889999999999
Q ss_pred EeeCCCCCe-EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE-EEEEEEE
Q psy2145 660 VVPVGDPTM-RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVS-STSLKVK 729 (808)
Q Consensus 660 v~~~g~P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~ 729 (808)
+ .|.|.| .|.|+++|..+..... ....|.|.++ +|+|.|+|.|.|.+|...+ ++.|.|+
T Consensus 122 ~--~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 122 A--VGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp E--ECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred e--cCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 9 799999 9999999999865422 3458999998 5999999999999999864 8888774
No 126
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.92 E-value=1.1e-23 Score=203.80 Aligned_cols=178 Identities=22% Similarity=0.402 Sum_probs=145.6
Q ss_pred eeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe-CCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEe
Q psy2145 51 YTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK-NGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVN 129 (808)
Q Consensus 51 ~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 129 (808)
.+...|.++ .+.+|++++|.|.+.+ .|. .+.|+| +|..+....++.+..+++..+|.|.+++.+|+|.|+|.|.|
T Consensus 4 ~~~~~~~~~-~v~~G~~v~L~C~~~~--~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (189)
T 2v44_A 4 QVTISLSKV-ELSVGESKFFTCTAIG--EPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATD 79 (189)
T ss_dssp EEEESCSEE-EEETTCCEEEEEEEEE--CCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred EEEecCCce-EEecCCcEEEEEEeec--CCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEe
Confidence 345567777 8999999999999985 566 899999 88999888999988888888999999999999999999999
Q ss_pred cCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 130 LVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 130 ~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
..|.. ...+.|.|. .+|.+...+....+.+|+.+.|.|.+
T Consensus 80 ~~g~~~~~~~~l~v~--------------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~- 120 (189)
T 2v44_A 80 AKGQTQEATVVLEIY--------------------------------------QKLTFREVVSPQEFKQGEDAEVVCRV- 120 (189)
T ss_dssp TTSCEEEEEEEEEEE--------------------------------------CCCEEESCCCSEEEETTSCEEECCEE-
T ss_pred CCCCcEEEEEEEEEe--------------------------------------cCCceeecCCcEEEeCCCCEEEEEEE-
Confidence 98876 556667664 35666666777889999999999999
Q ss_pred ecCCCCeEEEEeeCCEEcc--CCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 209 PVSDNTMKVEWFHNNVPIK--SGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~--~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
.+.|.+.+.|+++|..+. ...++....++ +|.|.++..+|+|.|+|.|.|..|.......+.|
T Consensus 121 -~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 121 -SSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185 (189)
T ss_dssp -ECSSCCEEEEEEEC--CEECCCTTEEECTTS---CEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEE
T ss_pred -CcCCCCcEEEEECCcEEeccCCCCEEEecCC---cEEEEEcCcccCeEEEEEEEccccCceeeeeEEE
Confidence 588889999999999885 34555554443 7999999999999999999999876655544444
No 127
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.91 E-value=1.9e-23 Score=203.33 Aligned_cols=178 Identities=19% Similarity=0.302 Sum_probs=146.6
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC--ceEEEecCc-------eEEEEEccCCCCCc
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS--RFTETNNFG-------FVALDIMQCLPEDS 253 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~-------~~~L~I~~~~~~D~ 253 (808)
+|.|...+.++.+.+|++++|.|.+. .+.|.+.|.|+|||..+.... ++.+..... ..+|.|.+++.+|+
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~-~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 80 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQ-VQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDT 80 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEE-EESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTC
T ss_pred CCeeccChhheEEecCCcEEEecccc-cCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCC
Confidence 68899999999999999999999994 167888999999999998763 344333221 45899999999999
Q ss_pred EEEEEEEEeCceeEEEE-EEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCe
Q psy2145 254 GVYTCRAVNALGQAVTS-GNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~-~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|..|...+. +.|.|.. +|.+...+....+.+|+.
T Consensus 81 G~Y~C~~~~~~~~~~~~~~~l~V~~-------------------------------------~p~~~~~~~~~~~~~g~~ 123 (195)
T 2c5d_C 81 GQYQCLVFLGHQTFVSQPGYVGLEG-------------------------------------LPYFLEEPEDRTVAANTP 123 (195)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECC-------------------------------------SCEEEECCCCEEECTTCC
T ss_pred cEEEEEEEeCCCceecccEEEEEec-------------------------------------CCeEEcCCCcEEEcCCCE
Confidence 99999999988876544 7777754 566766667788899999
Q ss_pred EEEEEEEeecCCCcc-EEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEE
Q psy2145 333 AHFEARLIPVGDSKL-KVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV-TSSTLFV 407 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V 407 (808)
+.|.|.+ .|.|.+ .|.|+++|..+...... ....+|.|.++. |+|.|+|.|.|..|... ..+.|.|
T Consensus 124 ~~l~C~~--~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 124 FNLSCQA--QGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEEEEE--ECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEeEC--CCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 9999999 789999 99999999998766542 223479999987 89999999999999886 5788888
No 128
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.91 E-value=4.6e-23 Score=199.93 Aligned_cols=182 Identities=25% Similarity=0.436 Sum_probs=150.7
Q ss_pred CCeEEeecC--ceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 183 APIFTTSLK--NCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 183 ~P~~~~~~~--~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
||.|...+. ++.+.+|++++|.|.+ .+.|.+.+.|+++|..+....++....... +|.|.+++.+|+|.|+|.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~~ 77 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRA--SGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRA 77 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEE--ECSSCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEee--ccCCCCeEEEEECCeEcCCCccEEEeCCee--EEEEecCChhcCcEEEEEE
Confidence 677776554 5778999999999999 578888999999999998888877665544 7999999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEe
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLI 340 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~ 340 (808)
.|..|.....+.|.|..+ |.+... ....+.+|+.+.|.|.+
T Consensus 78 ~~~~~~~~~~~~l~V~~~-------------------------------------p~~~~~-~~~~~~~g~~v~l~C~~- 118 (192)
T 2va4_A 78 TNKAGEDEKQAFLQVFVQ-------------------------------------PHIIQL-KNETTYENGQVTLVCDA- 118 (192)
T ss_dssp EETTEEEEEEEEEEEEEE-------------------------------------EEEEEE-CCEEECTTSEEEEEEEE-
T ss_pred EccccccceEEEEEEEcc-------------------------------------Cccccc-CcceEEeCCeEEEEEEe-
Confidence 999998888888888653 333322 23456789999999998
Q ss_pred ecCCCccEEEEEEC--CEeccC-----CCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 341 PVGDSKLKVTWLRN--GVPIQA-----SNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 341 ~~g~p~~~v~W~~~--g~~l~~-----~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
.|.|.+.+.|+++ |..+.. ..++.+....+..+|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 119 -~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 119 -EGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp -EEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred -cCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCCceEEEEEEEeC
Confidence 7889999999998 666654 345666666677799999999999999999999999998888888874
No 129
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.91 E-value=3.3e-24 Score=208.08 Aligned_cols=184 Identities=28% Similarity=0.481 Sum_probs=153.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccC-CCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKS-GSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+.++.+.+|++++|.|.+ .+.|.+.+.|+++|..+.. ..++.+..++. +|.|.+++.+|+|.|+|.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~--~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~ 80 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAV--ESYPQPEISWTRNKILIKLFDTRYSIRENGQ--LLTILSVEDSDDGIYCCT 80 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCE--EEESCCEEEEEETTEECCTTCTTEEEEGGGT--EEEESSCCGGGCEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeC--CCCCCCeEEEEECCEEccccCccEEEcCCcc--EEEEcCCCcccCeEEEEE
Confidence 557888888888999999999999999 4677889999999999865 45666555444 799999999999999999
Q ss_pred EEeCcee-EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 260 AVNALGQ-AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 260 a~n~~g~-~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
+.|..|. ......|.|.. +|.+...+....+.+|+.+.|.|.
T Consensus 81 ~~~~~~~~~~~~~~l~v~~-------------------------------------~p~~~~~~~~~~~~~g~~~~l~C~ 123 (192)
T 2iep_A 81 ANNGVGGAVESCGALQVKM-------------------------------------KPKITRPPINVKIIEGLKAVLPCT 123 (192)
T ss_dssp EECSSSCCEEEEEEEEEEE-------------------------------------EEEEEECCCCEEEETTSCEEECCE
T ss_pred EEcCCCceeEeEEEEEEEe-------------------------------------CCccccCCcceEEeCCCcEEEEEE
Confidence 9998887 45567777765 445555566778899999999999
Q ss_pred EeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEE-EEEEEEEec
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVT-SSTLFVESK 410 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~ 410 (808)
+ .|.|.+.+.|+++|..+..+.++....++ +|.|.++..+|+|.|+|.|.|..|...+ .+.|.|..+
T Consensus 124 ~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~p 191 (192)
T 2iep_A 124 T--MGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVF 191 (192)
T ss_dssp E--EEESCCEEEEEETTEECCCCSSEEECTTS---CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-
T ss_pred E--eccCCceEEEEeCCEEccCCCcEEEecCC---cEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeC
Confidence 8 78899999999999999888777665543 6999999999999999999999998854 588888754
No 130
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.91 E-value=2e-24 Score=213.23 Aligned_cols=195 Identities=25% Similarity=0.403 Sum_probs=142.6
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCC----eEEE-eeCcEE--EEEECCCCCCCC
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSR----ITTK-HDFGYV--AMDLSHVRAEDE 574 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~----~~~~-~~~~~~--~L~I~~v~~~D~ 574 (808)
.||.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..... .... ..+... .|.|.+++.+|+
T Consensus 8 ~pp~i~~~p~~~-~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 8 FPPRIVEHPSDL-IVSKGEPATLNCKA--EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEEECCCCE-EECTTCCEEECCEE--EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred CCcceecCCCce-EEeCCCcEEEEEEc--CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 478898888776 68999999999999 7889999999999998875431 1222 222221 245577899999
Q ss_pred EEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 575 GIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 575 G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
|.|+|.|.|..|.. ...+.|.|...+. .+...+ ....+.+|+.
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~-----------------------------------~~~~~~-~~~~~~~g~~ 128 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRD-----------------------------------DFRQNP-SDVMVAVGEP 128 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECS-----------------------------------SCSBCC-CCEEEETTSC
T ss_pred eEEEEEEECCCCceeecceEEEEEeccc-----------------------------------cceeCC-CceEecCCCc
Confidence 99999999999876 4467777765322 111111 1245788999
Q ss_pred EEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE-EEEEEEeCC
Q psy2145 654 AHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSS-TSLKVKSKS 732 (808)
Q Consensus 654 v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s-~~l~V~~~p 732 (808)
+.|.|.+. .|.|.+.|.|++||..+..+.+..... ++ .|.|.++..+|+|.|+|.|.|.+|...+. +.|.|..+|
T Consensus 129 ~~l~C~~~-~~~p~~~v~W~~~~~~l~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 129 AVMECQPP-RGHPEPTISWKKDGSPLDDKDERITIR-GG--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EEEECBCC-CEESCCEEEEEETTEEECTTSTTEEEE-TT--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEecC-CCCCCCEEEEEECCccCCCCcceEEcc-CC--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 99999873 588999999999999998754433332 33 79999999999999999999999997764 899999999
Q ss_pred CccccCC
Q psy2145 733 DIVSESL 739 (808)
Q Consensus 733 ~~~~~~~ 739 (808)
.+...++
T Consensus 205 ~~~~~P~ 211 (212)
T 2v9r_A 205 SFVKAAA 211 (212)
T ss_dssp -------
T ss_pred hHhhhcc
Confidence 8775543
No 131
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.91 E-value=2.5e-24 Score=213.58 Aligned_cols=189 Identities=26% Similarity=0.446 Sum_probs=144.4
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC--CeEEEeeCcE--EEEEECCCCCCCCE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS--RITTKHDFGY--VAMDLSHVRAEDEG 575 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~--~~~~~~~~~~--~~L~I~~v~~~D~G 575 (808)
...+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+.... .......++. ..|.|.+++.+|+|
T Consensus 6 ~~~~P~i~~~p~~~-~v~~G~~v~L~C~~--~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G 82 (217)
T 2vr9_A 6 QYQSPRIIEHPTDL-VVKKNEPATLNCKV--EGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGG 82 (217)
T ss_dssp CCCCCEEEECCCCE-EECTTSCEEECCEE--ECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCE
T ss_pred ccCCCEEecCCCce-EEeCCCcEEEEEEc--CCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCc
Confidence 35689999988876 68999999999999 789999999999999987642 2222222332 23478999999999
Q ss_pred EEEEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceE
Q psy2145 576 IYICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSA 654 (808)
Q Consensus 576 ~Y~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 654 (808)
.|+|.|.|..|... ..+.|.|...+ |.+...+. ...+.+|+.+
T Consensus 83 ~Y~C~~~n~~g~~~~~~~~l~v~~~~-----------------------------------~~~~~~~~-~~~~~~g~~v 126 (217)
T 2vr9_A 83 EYWCVAKNRVGQAVSRHASLQIAVLR-----------------------------------DDFRVEPK-DTRVAKGETA 126 (217)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEEC-----------------------------------CSCSBCCC-CEEECTTSCE
T ss_pred eEEEEEecCCCccccccceEEEEEeC-----------------------------------CCcEECCC-ccEEcCCCeE
Confidence 99999999999764 35677766532 22222211 2457889999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccC--------CCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 655 HYDCRVVPVGDPTMRFEWFVNGVELKM--------GSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 655 ~l~C~v~~~g~P~p~i~W~~~g~~l~~--------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
.|.|.+. .|.|.|.|.|+++|..+.. ..++.+.. .+ +|.|.++..+|+|.|+|.|+|.+|....++.+
T Consensus 127 ~l~C~~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~-~~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~ 202 (217)
T 2vr9_A 127 LLECGPP-KGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVD-GG--NLLISNVEPIDEGNYKCIAQNLVGTRESSYAK 202 (217)
T ss_dssp EECCBCC-CEESCCEEEEEETTEEECCCCCC---CCCSEEEET-TT--EEEESSCCSTTCEEEEEEEEETTEEEECCCEE
T ss_pred EEEEECC-CCCCCCeEEEEECCcCCCcccccccccCCcEEecC-CC--cEEEeeCCHHHCeEEEEEEEcccceeccccEE
Confidence 9999873 5899999999999999984 34444332 22 79999999999999999999999999988777
Q ss_pred EEEeC
Q psy2145 727 KVKSK 731 (808)
Q Consensus 727 ~V~~~ 731 (808)
.|...
T Consensus 203 lv~~~ 207 (217)
T 2vr9_A 203 LIVQV 207 (217)
T ss_dssp EEEC-
T ss_pred EEEEe
Confidence 66544
No 132
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.91 E-value=4.4e-23 Score=198.24 Aligned_cols=173 Identities=16% Similarity=0.279 Sum_probs=141.4
Q ss_pred eeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCC--eEEEEEcccCcCCCeeEEEEEE
Q psy2145 51 YTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFG--YVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 51 ~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~--~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
.++..|.++ .+.+|++++|.|.+. +.|.+.+.|+|+|..+....++.+..+.. ..+|.|.+++.+|+|.|+|.|.
T Consensus 4 ~~~~~p~~~-~v~~G~~v~l~C~~~--~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 4 KLMGAPVKL-TVSQGQPVKLNCSVE--GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp ---CCCEEE-EEETTCCEEEEEEEE--SCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred EEEeCCcce-EEeCCCcEEEEEEEe--CCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 455667777 899999999999999 57888999999999998877766555442 4689999999999999999999
Q ss_pred ecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 129 NLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 129 n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
|..|.. ...+.|.|. .+|.|...+....+.+|+.+.|.|.+
T Consensus 81 ~~~~~~~~~~~~l~V~--------------------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~ 122 (182)
T 1rhf_A 81 DGGETEISQPVWLTVE--------------------------------------GVPFFTVEPKDLAVPPNAPFQLSCEA 122 (182)
T ss_dssp SCTTCEECCCEEEEEE--------------------------------------CSCEEEECCCCEEECTTCCEEEEEEE
T ss_pred cCCCcEEEEEEEEEEe--------------------------------------cCCeEEecCcceEecCCCEEEEEeEe
Confidence 986653 456777773 46788888888899999999999999
Q ss_pred eecCCCCe-EEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE-EEEEEE
Q psy2145 208 IPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT-SGNLLV 275 (808)
Q Consensus 208 ~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~-~~~l~V 275 (808)
.+.|.+ .+.|+++|..+..... ....|.|.++ +|+|.|+|.|.|..|...+ ++.|.|
T Consensus 123 --~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 123 --VGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHL 181 (182)
T ss_dssp --ECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --cCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEe
Confidence 578888 9999999999865422 2238999998 5999999999999998864 777776
No 133
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.91 E-value=3.6e-23 Score=200.09 Aligned_cols=180 Identities=20% Similarity=0.365 Sum_probs=139.3
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec--cCcEEEEeeCCeEEEEEcccCcCCCeeEEEEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI--GHRFRPIHDFGYVALDIIDTIPEDSGTYTCRA 127 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~--~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 127 (808)
+.++..|.+. .+.+|+.++|.|.+. +.|.+.+.|++++..+.. +.++....++ +|.|.+++.+|+|.|+|.+
T Consensus 3 ~~~~~~~~~~-~v~~G~~v~l~C~~~--~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~---~L~i~~~~~~d~G~Y~C~~ 76 (189)
T 2v5t_A 3 LTFREVVSPQ-EFKQGEDAEVVCRVS--SSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRCEG 76 (189)
T ss_dssp CEEEECCSSE-EEETTSCEEECCEEE--CSSCCEEEEEC-----CBCCCTTEEECTTS---CEEETTCCGGGCEEEEEEE
T ss_pred ceeeccCCCE-EEeCCCcEEEEEEEc--CCCCCEEEEEECCccceeccCCeEEEecCC---CEEEeeCCHhHCcEEEEEE
Confidence 4456777777 899999999999998 468889999999988864 4555544333 6999999999999999999
Q ss_pred EecCcceEE--EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC--ceeecCCCeEEE
Q psy2145 128 VNLVGFAEV--QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK--NCEIKEGQRAHF 203 (808)
Q Consensus 128 ~n~~g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~--~~~v~~G~~v~L 203 (808)
.|..+.... ...|.|. .+|.+...+. ...+.+|+.+.|
T Consensus 77 ~~~~~~~~~~~~~~l~v~--------------------------------------~~p~~~~~~~~~~~~~~~g~~v~l 118 (189)
T 2v5t_A 77 RVEARGEIDFRDIIVIVN--------------------------------------VPPAISMPQKSFNATAERGEEMTF 118 (189)
T ss_dssp EETTTTEEEEEEEEEEEE--------------------------------------EEEEEECSCCEEEEETTSCCCEEE
T ss_pred EEcCCCceEEEEEEEEec--------------------------------------CCCCcccccccccccccCCCcEEE
Confidence 998765443 3444443 2344443333 456789999999
Q ss_pred EEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 204 ECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 204 ~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
.|.+ .+.|.+.+.|+++|..+....++......+ +|.|.++..+|+|.|+|.|.|..|....++.|.|..
T Consensus 119 ~C~~--~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~--~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~v 188 (189)
T 2v5t_A 119 SCRA--SGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 188 (189)
T ss_dssp ECEE--EEESCCEEEEEETTEECCCSSSEEEETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEE--ccCCCCeEEEEECCEECcCCCcEEEecCCC--EEEEcCCChhhCeeEEEEEEeCCCceeEEEEEEEEe
Confidence 9999 467888999999999998888777665544 799999999999999999999999999998888853
No 134
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.91 E-value=1.5e-22 Score=196.22 Aligned_cols=182 Identities=18% Similarity=0.280 Sum_probs=146.7
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEee-CCEEcc-CCCceEEEe-cCceEEEEEccCCCCCcEEEEE
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFH-NNVPIK-SGSRFTETN-NFGFVALDIMQCLPEDSGVYTC 258 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~-~g~~l~-~~~~~~~~~-~~~~~~L~I~~~~~~D~G~Y~C 258 (808)
++.|...+.+..+.+|++++|.|.+ .+.+ .+.+.|++ +|..+. ...++.... +.+..+|.|.+++.+|+|.|+|
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~--~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQV--AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEE--CCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEEC--CCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEE
Confidence 5778889999999999999999999 4555 78999999 998887 445555443 2455689999999999999999
Q ss_pred EEEeCc-eeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEE
Q psy2145 259 RAVNAL-GQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEA 337 (808)
Q Consensus 259 ~a~n~~-g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C 337 (808)
.|.|.. +.....+.|.|.. +|.+...+....+.+|+.+.|.|
T Consensus 80 ~~~~~~~~~~~~~~~l~v~~-------------------------------------~p~~~~~~~~~~~~~g~~~~l~C 122 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIFQ-------------------------------------KLMFKNAPTPQEFKEGEDAVIVC 122 (191)
T ss_dssp EEEETTTEEEEEEEEEEEEC-------------------------------------CSEEEECCSSEECCTTSCEEECC
T ss_pred EEEcCCCcceEEEEEEEeec-------------------------------------CceEecCCCcEeecCCCeEEEEE
Confidence 999987 5556667777754 56666666777889999999999
Q ss_pred EEeecCCCccEEEEEECCEeccCC--CcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 338 RLIPVGDSKLKVTWLRNGVPIQAS--NRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 338 ~~~~~g~p~~~v~W~~~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
.+ .|.|.+.+.|+++|..+... .++....+ + .|.|.++..+|+|.|+|.|.|..|.......+.|.
T Consensus 123 ~~--~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i~v~ 190 (191)
T 1epf_A 123 DV--VSSLPPTIIWKHKGRDVILKKDVRFIVLSN-N--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190 (191)
T ss_dssp EE--ECSSCCEEEEEETTEEGGGGCCTTEEECTT-S--CEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEE
T ss_pred EE--CCCCCCEEEEEECCEEeeccCCceEEEecC-C--eEEECCCChhhCEEEEEEEEEecceeEEEEEEEEe
Confidence 99 79999999999999998643 35554443 3 69999999999999999999999776666656553
No 135
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.90 E-value=4.5e-23 Score=204.57 Aligned_cols=189 Identities=17% Similarity=0.355 Sum_probs=144.7
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
...+.|...+.+. .+.+|+.+.|.|.+ .+.|.+.|.|+|+|..+..+.. + .|.|.+++.+|+|.|+|.
T Consensus 16 ~~~~~i~~~p~~~-~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~-------~--~L~i~~v~~~d~G~Y~C~ 83 (218)
T 3k0w_A 16 PRGSKITVNPESK-AVLAGQFVKLCCRA--TGHPFVQYQWFKMNKEIPNGNT-------S--ELIFNAVHVKDAGFYVCR 83 (218)
T ss_dssp ---CCEEECCCCE-EEETTSBEEEECEE--TTTTSSEEEEEETTEECTTCCS-------S--EEEETTCCGGGCEEEEEE
T ss_pred CCCCEEEECCCCe-EEeCCCcEEEEeee--cCCCCCEEEEEECCEECCCCCC-------C--EEEEccCChhhCeEeEEE
Confidence 3467788887776 68999999999999 8999999999999999876532 2 799999999999999999
Q ss_pred EEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 581 ATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 581 a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
|.|..|.. +..+.|.|...+...... .......+|.+...+. ...+.+|+.+.|.|.
T Consensus 84 ~~n~~~~~~s~~~~l~V~~~~~~~~~~---------------------~~~~~~~~p~~~~~~~-~~~v~~G~~v~L~C~ 141 (218)
T 3k0w_A 84 VNNNFTFEFSQWSQLDVCDIPESFQRS---------------------VDGVSESKLQICVEPT-SQKLMPGSTLVLQCV 141 (218)
T ss_dssp EECTTCCEECCCEEEEEECCCGGGCTT---------------------CCSBCCSSCEEEECCC-CEEECTTCCEEEECE
T ss_pred EEcCCCCceeeEEEEEEEccCcccccc---------------------cccccCCCceEEECCC-ceeecCCCcEEEEEE
Confidence 99998865 455788887654321000 0000112355555443 357889999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc-eEEEEEEEEEeCCCc
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE-AVSSTSLKVKSKSDI 734 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~s~~l~V~~~p~~ 734 (808)
+ .|.|.+.|.|++||..+..+.+ .+|.|.++..+|+|.|+|.|.|..|. .+..+.|.|...+.+
T Consensus 142 ~--~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~~~~ 206 (218)
T 3k0w_A 142 A--VGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 206 (218)
T ss_dssp E--EBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC----
T ss_pred e--cccCCCeEEEEECCEECCCCCC---------CEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCCccC
Confidence 9 7999999999999999986543 27999999999999999999999998 556788888765444
No 136
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.90 E-value=1.6e-23 Score=206.61 Aligned_cols=181 Identities=20% Similarity=0.358 Sum_probs=135.8
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEec------------CCCCCeEEEeeCcEEEEEECCCCC
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPL------------EDSSRITTKHDFGYVAMDLSHVRA 571 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l------------~~~~~~~~~~~~~~~~L~I~~v~~ 571 (808)
+.|..++.+. .+.+|+.+.|.|.+ .+.|.+.|.|+|++..+ ....++.... + .|.|.+++.
T Consensus 2 ~~v~~~~~~~-~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~--~L~i~~v~~ 74 (212)
T 1f97_A 2 GSVYTAQSDV-QVPENESIKLTCTY--SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS--S--GITFSSVTR 74 (212)
T ss_dssp CEEECSCSEE-EEETTCCEEEECEE--ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET--T--EEEESCCCG
T ss_pred ceEEecCCCe-EEEcCCCEEEEeEe--CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec--e--eEEEcccCc
Confidence 3455555555 68999999999999 68899999999988652 2245555443 2 799999999
Q ss_pred CCCEEEEEEEEeCCe--eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 572 EDEGIYICKATNALG--EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G--~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
+|+|.|+|.|.|..| ....++.|.|...|.+ ..... ...+.
T Consensus 75 ~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~------------------------------------~~~~~-~~~~~ 117 (212)
T 1f97_A 75 KDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSK------------------------------------PTISV-PSSVT 117 (212)
T ss_dssp GGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCC------------------------------------CEEEC-CSEEE
T ss_pred ccCeEEEEEEEccCCCcccEEEEEEEEEcCCCC------------------------------------cccCC-ccccC
Confidence 999999999999977 6667788888765432 11111 24578
Q ss_pred CCceEEEEEE-EeeCCCCCeEEEEEECCE-EccCCCcE-------EEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcce
Q psy2145 650 EGQSAHYDCR-VVPVGDPTMRFEWFVNGV-ELKMGSRF-------HVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEA 720 (808)
Q Consensus 650 ~G~~v~l~C~-v~~~g~P~p~i~W~~~g~-~l~~~~~~-------~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 720 (808)
+|+.+.|.|. + .|.|.|.|.|+++|. .+..+.+. .+........|.|.++..+|+|.|+|.|.|.+|..
T Consensus 118 ~g~~~~l~C~~~--~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 195 (212)
T 1f97_A 118 IGNRAVLTCSEH--DGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTA 195 (212)
T ss_dssp TTSCEEEEEECS--CCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCC
T ss_pred CCCeEEEEEEcc--cCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCc
Confidence 8999999999 5 799999999999999 88764431 12222334589999999999999999999999998
Q ss_pred EE--EEEEEEEe
Q psy2145 721 VS--STSLKVKS 730 (808)
Q Consensus 721 ~~--s~~l~V~~ 730 (808)
.. .+.|.|..
T Consensus 196 ~~s~~~~l~V~~ 207 (212)
T 1f97_A 196 MRSEAAHMDAVE 207 (212)
T ss_dssp EECCCEEEEEES
T ss_pred cccceEEEEEEE
Confidence 44 55566653
No 137
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.90 E-value=4.3e-23 Score=202.10 Aligned_cols=173 Identities=16% Similarity=0.211 Sum_probs=134.4
Q ss_pred cccCCCceEEEEEEeeCCCCC-----cEEEEEE-CCEecCCCCCeEEEeeC---cEEEEEECCCCCCCCEEEEEEEEeCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPT-----LKVEWFR-NEKPLEDSSRITTKHDF---GYVAMDLSHVRAEDEGIYICKATNAL 585 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~-----~~v~W~k-~g~~l~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~ 585 (808)
.+.+|+.+.|.|.+ .+.|. +.|.|+| ++..+....++.+..+. +..+|.|.+++.+|+|.|+|.|.|..
T Consensus 13 ~v~~G~~v~L~C~~--~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 90 (202)
T 3bp6_B 13 TVDVGSSVSLECDF--DRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGA 90 (202)
T ss_dssp EEETTSCEEEEEEE--CTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EEeCCCcEEEEEEe--cCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCC
Confidence 58899999999999 78886 8999999 66555555666655432 45689999999999999999999999
Q ss_pred eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC
Q psy2145 586 GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD 665 (808)
Q Consensus 586 G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~ 665 (808)
|.....+.|.|...+. .|.+.. ..+.+|+.+.|.|.+ .|.
T Consensus 91 ~~~~~~~~l~V~~~~~---------------------------------~p~~~~-----~~~~~g~~v~l~C~~--~g~ 130 (202)
T 3bp6_B 91 AWDYKYLTVKVKASYM---------------------------------RIDTRI-----LEVPGTGEVQLTCQA--RGY 130 (202)
T ss_dssp EEEEEEEEEEEEBCCC---------------------------------CEEEEE-----EECTTTCCEEEEEEE--EEB
T ss_pred CcceEEEEEEecCCCC---------------------------------cccEEE-----EecCCCCeEEEEEEc--ccc
Confidence 9888888888876431 233332 135679999999999 789
Q ss_pred CCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 666 PTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 666 P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
|.|.|.|+++|..+.. .+....++....|.|.++..+|+|.|+|.|.|.+|....++.|.|..+
T Consensus 131 P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 131 PLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp SCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred CCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 9999999999876532 222222344567889999999999999999999999999999988654
No 138
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.90 E-value=2.6e-23 Score=205.46 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=127.0
Q ss_pred cccCC--CceEEEEEEeeCCCCCcEEEEEE---CCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEE
Q psy2145 515 AVEEG--KNAHFSCRLIPVGDPTLKVEWFR---NEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAV 589 (808)
Q Consensus 515 ~v~~G--~~v~l~C~v~~~g~P~~~v~W~k---~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 589 (808)
.+.+| +.+.|.|.+ .+ |.+.++|++ ||..+..+.++...... .|.|.+++.+|+|.|+|.|.|..+...
T Consensus 18 ~v~eG~~~~v~L~C~~--~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~---~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 18 YITENKNKTVVIPCLG--SI-SNLNVSLCARYPEKRFVPDGNRISWDSKK---GFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EECCSTTCEEEECCCB--SS-TTCCEEEEEETTTEEECCCSSSCEEETTT---EEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred EEecCCCccEEEeecc--CC-CCcEEEEEhhcCCCccccCCCcccccCCc---cEEEccCChhcCceEEEEEEECCeeEE
Confidence 68899 999999998 55 779999988 47777766555443332 599999999999999999999644433
Q ss_pred EE-EEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCC--
Q psy2145 590 TT-ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDP-- 666 (808)
Q Consensus 590 ~s-~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P-- 666 (808)
+. +.|.|... .+|.+.........+.+|+.++|.|.+ .|.|
T Consensus 92 s~~~~l~v~~~----------------------------------~~p~~~~~~~~~~~v~~G~~v~L~C~~--~g~p~~ 135 (213)
T 2x1w_L 92 SIMYIVVVVGY----------------------------------RIYDVVLSPSHGIELSVGEKLVLNCTA--RTELNV 135 (213)
T ss_dssp CCCEEEEECBC----------------------------------CEEEEEEESCSCEEEETTCCEEEEEEE--EECTTB
T ss_pred EEEEEEEEeCC----------------------------------cccceEEcCCCCeEEcCCCCEEEEEEE--ECCCCC
Confidence 22 55555321 124444444444478999999999999 5654
Q ss_pred CeEEEEEECCEEccCCCc-EEEEE-------eCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCc
Q psy2145 667 TMRFEWFVNGVELKMGSR-FHVQH-------DFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 667 ~p~i~W~~~g~~l~~~~~-~~~~~-------~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
.+.|.|+++|..+..... ..... ....++|.|.++..+|+|.|+|.|.|..|..+.++.|.|..+|.|
T Consensus 136 ~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~i 211 (213)
T 2x1w_L 136 GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEDPIE 211 (213)
T ss_dssp CCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC----
T ss_pred ceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEeccccc
Confidence 468999999987543211 10000 112458999999999999999999999999999999999988754
No 139
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.5e-23 Score=205.01 Aligned_cols=187 Identities=19% Similarity=0.258 Sum_probs=140.4
Q ss_pred CeeeecCCCcccccCCCceEEEEE-EeeCCCCC-cEEEEEECCEecCC--CCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCR-LIPVGDPT-LKVEWFRNEKPLED--SSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~-v~~~g~P~-~~v~W~k~g~~l~~--~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
|.|.........+.+|+.+.|.|. + .+.|. +.+.|+|++..+.. ..+......++ .|.|.+++.+|+|.|+|
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~L~C~~~--~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C 83 (201)
T 3s97_C 8 DPFPPEERPEVRVKEGKGMVLLCDPP--YHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSC 83 (201)
T ss_dssp CCCCSSCCCCEEEETTCCEEECCCCC--SEESSCCEEEEEESSTTCBCCCSSSEEECTTTC--CEEESSCCGGGCEEEEE
T ss_pred CccCcCCCceEEEECCCCEEEecccc--ccCCCceEEEEEECCceeeeeeCCCeEEEcCCC--eEEECcCCcccCeEEEE
Confidence 344443333337899999999999 6 78898 99999999988752 33333333333 69999999999999999
Q ss_pred EEEeCCeeEEEE---EEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEE
Q psy2145 580 KATNALGEAVTT---ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHY 656 (808)
Q Consensus 580 ~a~N~~G~~~~s---~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l 656 (808)
.|.|..+..... ..+.+..... ....+|.+..... ...+.+|+.+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~p~~~~~~~-~~~~~~g~~~~l 133 (201)
T 3s97_C 84 FVSSPSITKSVFSKFIPLIPIPERT-----------------------------TKPYPADIVVQFK-DVYALMGQNVTL 133 (201)
T ss_dssp EEEEGGGTEEEECCCEEEEEECCSS-----------------------------CCCEEEEEEEECC-CEEEETTCCEEE
T ss_pred EEEecCCCcchhhcccceeeccccc-----------------------------cCCCCCceEecCC-ceEEecCCcEEE
Confidence 999987665542 3333332110 1112466666654 467889999999
Q ss_pred EEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 657 DCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 657 ~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
.|.+ .|.|.|.|.|+++|..+..+.++ ...+ .+|.|.++..+|+|.|+|.|.|..|..+.++.|.|++
T Consensus 134 ~C~~--~g~p~p~v~W~~~~~~~~~~~~~--~~~~--~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 134 ECFA--LGNPVPDIRWRKVLEPMPSTAEI--STSG--AVLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQA 201 (201)
T ss_dssp EEEE--EEESCCEEEEEETTBCCCTTCEE--ETTT--TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEc--cCCCCCceEEEeCCCcCCCceee--cCCC--CEEEEccCChhhCEEEEEEEEecCCceeeeEEEEEeC
Confidence 9999 79999999999999988755332 2223 3899999999999999999999999999999999973
No 140
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.89 E-value=1.6e-22 Score=194.70 Aligned_cols=165 Identities=22% Similarity=0.378 Sum_probs=131.6
Q ss_pred cccCCCceEEEEEEeeCCCCCc--EEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL--KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTA 592 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~--~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~ 592 (808)
.+.+|+.+.|.|.+ .+.|.+ .+.|+|+|..+...... .....|.|. +.+|+|.|+|.|.|.. ...+
T Consensus 9 ~v~~G~~v~l~C~~--~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~ 76 (184)
T 3b5h_A 9 VEDLGSKILLTCSL--NDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTA 76 (184)
T ss_dssp EEEETTEEEEEEEE--ESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT---SCEE
T ss_pred EEecCCCEEEEEEC--CCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCc---CcEE
Confidence 57899999999998 566666 89999999998766532 123367777 6899999999999832 3556
Q ss_pred EEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCCC-CeEEE
Q psy2145 593 SMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDP-TMRFE 671 (808)
Q Consensus 593 ~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~p~i~ 671 (808)
.|.|... |.+.... ....+.+|+.+.|.|.+ .|.| .|.|.
T Consensus 77 ~l~V~~~------------------------------------P~~~~~~-~~~~~~~g~~~~l~C~~--~g~p~~~~i~ 117 (184)
T 3b5h_A 77 NIQLHGP------------------------------------PRVKAVK-SSEHINEGETAMLVCKS--ESVPPVTDWA 117 (184)
T ss_dssp EEEECCS------------------------------------CCCEESC-SEEEECTTSCEEEEEEC--CCSSCCCEEE
T ss_pred EEEEecC------------------------------------CceeecC-CCcEEcCCCcEEEEEEE--CCCCCCCeEE
Confidence 7777654 3333332 23457889999999999 7999 89999
Q ss_pred EEE---CCE-EccC--CCcEEEEEeCCEEEEEEccCC-CCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 672 WFV---NGV-ELKM--GSRFHVQHDFGYVTLDITKCV-PADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 672 W~~---~g~-~l~~--~~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
|++ +|. .+.. +.++.+..+++.+.|.|.++. .+|+|.|+|.|.|.+|....++.|.|.+
T Consensus 118 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 118 WYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 999 554 4433 368888888888999999999 9999999999999999999999999874
No 141
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.89 E-value=9.8e-23 Score=199.45 Aligned_cols=170 Identities=17% Similarity=0.284 Sum_probs=129.6
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
+|.+...+.+. .+.+|+++.|.|.+ .+.|.+. |.|+|||..+.... ..|.|.+++.+|+|.|+|.|
T Consensus 7 ~p~i~~~p~~~-~v~~G~~v~L~C~~--~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a 73 (204)
T 3sgj_C 7 KAVVFLEPQWY-RVLEKDSVTLKCQG--AYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQT 73 (204)
T ss_dssp BCEEEEESCCS-EEETTCCEEEEEEC--CSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEEcCCCe-EEECCCCEEEEEcC--CCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEe
Confidence 56666666654 68999999999999 7888776 99999999887543 27999999999999999999
Q ss_pred EeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEe
Q psy2145 582 TNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVV 661 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~ 661 (808)
.|. ..+..+.|.|... |.+..... ..+.+|+.+.|.|.+.
T Consensus 74 ~n~--~~s~~~~l~V~~~------------------------------------p~~~~~~~--~~v~~G~~v~L~C~~~ 113 (204)
T 3sgj_C 74 QLS--TLSDPVQLEVHIG------------------------------------WLLLQAPR--WVFKEEDPIHLRCHSW 113 (204)
T ss_dssp TTS--BCCCCEEEEEECS------------------------------------SEEEECSC--SEEETTCCEEEEEEEG
T ss_pred CCC--cccccEEEEEecC------------------------------------ceEecCCc--eeEeCCCcEEEEEEec
Confidence 985 3444567777653 32222222 4678899999999993
Q ss_pred eCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEe-CCcceEEEEEEEEEeCCCc
Q psy2145 662 PVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAIN-RAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 662 ~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N-~~G~~~~s~~l~V~~~p~~ 734 (808)
.+.|.+.|.|+|||..+... ... ..|.|.++..+|+|.|+|.|.| ..|..+..+.|.|.+++..
T Consensus 114 -~~~p~~~v~W~k~g~~~~~~------~~~--~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 114 -KNTALHKVTYLQNGKGRKYF------HHN--SDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp -GGCCCEEEEEEETTEEEEEE------EEC--CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred -CCCCCceEEEEECCcEeecc------cCC--ceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCC
Confidence 24467999999999987421 122 3799999999999999999999 5566677889999877644
No 142
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.89 E-value=4.1e-23 Score=210.31 Aligned_cols=206 Identities=18% Similarity=0.245 Sum_probs=128.4
Q ss_pred cCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCcee
Q psy2145 115 TIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCE 194 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 194 (808)
++.+|+|.|+|.|. |.......+.+ ..+|.+...+..+.
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~--------------------------------------~~~~~~~~~p~~~~ 49 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNW--------------------------------------LRELVMTQSPLTLS 49 (254)
T ss_dssp --------------------------------------------------------------------CCCEEEECSEEE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhhe--------------------------------------eeceeEEeCCceEE
Confidence 78899999999998 44333333333 22567777788899
Q ss_pred ecCCCeEEEEEEEeecCCC-----CeEEEEeeC--CEEc------------cCCCceEEEecCceEEEEEccCCCCCcEE
Q psy2145 195 IKEGQRAHFECRLIPVSDN-----TMKVEWFHN--NVPI------------KSGSRFTETNNFGFVALDIMQCLPEDSGV 255 (808)
Q Consensus 195 v~~G~~v~L~C~~~~~~~p-----~~~v~W~~~--g~~l------------~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 255 (808)
+.+|++++|.|.+ .+.| .+.|.|+|+ |..+ ....++.....++..+|.|.+++.+|+|.
T Consensus 50 v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 127 (254)
T 2c1o_A 50 VTIGQPASISCKS--SQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGI 127 (254)
T ss_dssp ECTTSCEEEEEEE--SSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSE
T ss_pred ecCCCcEEEEeec--cCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEE
Confidence 9999999999999 4666 489999984 3322 11356776666677799999999999999
Q ss_pred EEEEEEeCceeEE-EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEE
Q psy2145 256 YTCRAVNALGQAV-TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAH 334 (808)
Q Consensus 256 Y~C~a~n~~g~~~-~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~ 334 (808)
|+|.|.|..+... ..+.|.|... ..+|.+..........+|+.++
T Consensus 128 Y~C~a~n~~~~~~~~~~~l~V~~~----------------------------------~~~P~v~~~~~~~~~~~g~~v~ 173 (254)
T 2c1o_A 128 YYCVQGSHFPPTFGAGTKLELKRA----------------------------------DAAPTVSIFPPSSEQLTSGGAS 173 (254)
T ss_dssp EEEEECSSSSCEEBCCEEEEECCC----------------------------------CBCCEEEEECCCHHHHHTTEEE
T ss_pred EEEEEEcCcceEecCCEEEEECCC----------------------------------CCCCeeEeecCChhhccCCcEE
Confidence 9999999765432 2346666431 1255555433333344688999
Q ss_pred EEEEEeecC-CCc-cEEEEEECCEeccCCC--cEEEEee-Cc----EEEEEEccCCCCCCeEEEEEEEcCCcce
Q psy2145 335 FEARLIPVG-DSK-LKVTWLRNGVPIQASN--RVSTMHD-FG----YVALNFKYTYPEDSGTYTCRAVNELGEA 399 (808)
Q Consensus 335 l~C~~~~~g-~p~-~~v~W~~~g~~l~~~~--~~~~~~~-~~----~~~L~I~~v~~~d~G~Y~C~a~n~~g~~ 399 (808)
|.|.+ .| .|. +.|+|+|||.++..+. ......+ ++ ...|.|.++..+|+|.|+|.|.|.....
T Consensus 174 l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 174 VVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp EEEEE--EEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred EEEEE--ecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 99999 45 444 6799999999887651 1111111 11 3579999999999999999999987654
No 143
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.89 E-value=9.3e-23 Score=202.16 Aligned_cols=187 Identities=25% Similarity=0.410 Sum_probs=145.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC--ceEEEecCce--EEEEEccCCCCCcEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS--RFTETNNFGF--VALDIMQCLPEDSGVY 256 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~~~~~~--~~L~I~~~~~~D~G~Y 256 (808)
..+|.|...+..+.+.+|++++|.|.+ .+.|.+.|.|+|+|..+.... .......++. ..|.|.+++.+|+|.|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~--~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKV--EGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEE--ECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEc--CCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 579999999999999999999999999 578889999999999987642 2222222232 2347899999999999
Q ss_pred EEEEEeCceeEE-EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEE
Q psy2145 257 TCRAVNALGQAV-TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHF 335 (808)
Q Consensus 257 ~C~a~n~~g~~~-~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l 335 (808)
+|.|.|..|... ..+.|.|.. .+|.+...+....+.+|+.+.|
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~------------------------------------~~~~~~~~~~~~~~~~g~~v~l 128 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAV------------------------------------LRDDFRVEPKDTRVAKGETALL 128 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECE------------------------------------ECCSCSBCCCCEEECTTSCEEE
T ss_pred EEEEecCCCccccccceEEEEE------------------------------------eCCCcEECCCccEEcCCCeEEE
Confidence 999999988764 356677653 1344555556778899999999
Q ss_pred EEEEeecCCCccEEEEEECCEeccC--------CCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEE
Q psy2145 336 EARLIPVGDSKLKVTWLRNGVPIQA--------SNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFV 407 (808)
Q Consensus 336 ~C~~~~~g~p~~~v~W~~~g~~l~~--------~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 407 (808)
.|.+. .|.|.+.+.|+++|..+.. ..++....+ + +|.|.++..+|+|.|+|.|.|..|...++..+.+
T Consensus 129 ~C~~~-~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv 204 (217)
T 2vr9_A 129 ECGPP-KGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDG-G--NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLI 204 (217)
T ss_dssp CCBCC-CEESCCEEEEEETTEEECCCCCC---CCCSEEEETT-T--EEEESSCCSTTCEEEEEEEEETTEEEECCCEEEE
T ss_pred EEECC-CCCCCCeEEEEECCcCCCcccccccccCCcEEecCC-C--cEEEeeCCHHHCeEEEEEEEcccceeccccEEEE
Confidence 99862 5788999999999999873 334433322 3 6999999999999999999999999887755555
Q ss_pred Ee
Q psy2145 408 ES 409 (808)
Q Consensus 408 ~~ 409 (808)
..
T Consensus 205 ~~ 206 (217)
T 2vr9_A 205 VQ 206 (217)
T ss_dssp EC
T ss_pred EE
Confidence 43
No 144
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.89 E-value=8.2e-23 Score=198.99 Aligned_cols=184 Identities=12% Similarity=0.154 Sum_probs=133.5
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|...+.. .+.+|++++|.|.+ .+ |.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.|
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 4 PKPTLWAEPGS--VISWGNSVTIWCQG--TL-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEccCCC--cCCCCCcEEEEeeC--CC-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEEE
Confidence 46777776655 58899999999998 56 77899999999887542111 011123458999999999999999999
Q ss_pred EeCCee--EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 582 TNALGE--AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 582 ~N~~G~--~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|..|. .+..+.|.|.... .+|.+..... ..+.+|+.++|.|.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~---------------------------------~~p~~~~~~~--~~v~~G~~v~L~C~ 122 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGAY---------------------------------SKPTLSALPS--PLVTSGKSVTLLCQ 122 (196)
T ss_dssp EETTEEBCCCCCEEEEEECSS---------------------------------CCCEEEEESC--SEECTTCCEEEEEE
T ss_pred eCCCcccCCCccEEEEecCCC---------------------------------CCCEEEeCCc--ceecCCCeEEEEEe
Confidence 999983 3445666665421 1355554433 26789999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcE-EEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCc-----ceEEEEEEEEE
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRF-HVQHDFGYVTLDITKCVPADSGVYMCKAINRAG-----EAVSSTSLKVK 729 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G-----~~~~s~~l~V~ 729 (808)
+ .+ +.+.+.|+|+|..+...... ..........|.|.++..+|+|.|+|.|.|.++ ..+....|.|.
T Consensus 123 ~--~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 123 S--RS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp E--EE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred c--CC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 8 45 56799999999887654322 222222345899999999999999999999987 23334566664
No 145
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.89 E-value=1.4e-23 Score=224.21 Aligned_cols=184 Identities=17% Similarity=0.231 Sum_probs=149.4
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCE-EEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEG-IYIC 579 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G-~Y~C 579 (808)
-.+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|++++..+....... ......+|.|.+++.+|+| .|+|
T Consensus 156 c~~P~i~~~~~~~-~v~~G~~v~L~C~~--~g~p~p~i~W~~~~~~~~~~~~~~--~~~~~~~L~i~~v~~~D~G~~Y~C 230 (347)
T 2ifg_A 156 CGVPTLKVQVPNA-SVDVGDDVLLRCQV--EGRGLEQAGWILTELEQSATVMKS--GGLPSLGLTLANVTSDLNRKNVTC 230 (347)
T ss_dssp CCCCEEEEECCSS-CCBTTCCEEEEEEE--ECSSCCCCCEEESCCCSSEEECCC--CCSSEEEEEEESCCSTTTTCCEEE
T ss_pred CCCCceeccCCce-EEeCCCcEEEEEEE--ecCCCCEEEEEcCCceeecccccc--eecccceEEEeeCChHHCCCeEEE
Confidence 3578888877776 68999999999999 799999999999997654322111 1234458999999999999 9999
Q ss_pred EEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|.|..|..+.++.|.|..+ |.+ . ...+.+|+.+.|.|.
T Consensus 231 ~a~n~~g~~~~~~~l~V~~~------------------------------------P~i--~---~~~~~~g~~v~l~C~ 269 (347)
T 2ifg_A 231 WAENDVGRAEVSVQVNVSFP------------------------------------ASV--Q---LHTAVEMHHWCIPFS 269 (347)
T ss_dssp CCEETTEECCEEECCCCBEE------------------------------------EEE--E---ECCCEESSSEEEEEE
T ss_pred EEEcCCCCEEEEEEEEEcCC------------------------------------Cee--e---eccCccCceEEEEEE
Confidence 99999999988888888654 332 0 123567999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeC-------CEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF-------GYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
+ .|.|.|.|.|+|+|..+..+......... ...+|.|.++..+|+|.|+|.|.|.+|.++.++.|.|..+|
T Consensus 270 ~--~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 270 V--DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 347 (347)
T ss_dssp E--EEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEECSCCCC
T ss_pred e--eecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCCceeeEEEEEecCCC
Confidence 9 79999999999999999976665443221 25689999999999999999999999999999999998765
No 146
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.89 E-value=3.8e-22 Score=201.30 Aligned_cols=195 Identities=22% Similarity=0.351 Sum_probs=147.0
Q ss_pred CCCCeEEeec----CceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce---EEEecCceEEEEEccCCCCCc
Q psy2145 181 TQAPIFTTSL----KNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF---TETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~----~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~---~~~~~~~~~~L~I~~~~~~D~ 253 (808)
..+|.|..++ ..+.+.+|++++|.|.+ .+.|.+.|.|+|+|..+....++ ..... ..+|.|.+++.+|+
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~v~~~d~ 84 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPA--AGNPTPSISWLKNGREFRGEHRIGGIKLRHQ--QWSLVMESVVPSDR 84 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCE--ECSSCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGC
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEe--cCCCCceeEEEECCcccCCCCcccceeeecc--ceEEEEEeCCcccC
Confidence 4577776553 35789999999999999 57788899999999998755432 22222 23899999999999
Q ss_pred EEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCe-eccCCCceEeecCCe
Q psy2145 254 GVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPV-FTQPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~-~~~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|..|....++.|.|...+ ..+|. +...+....+.+|+.
T Consensus 85 G~Y~C~~~~~~~~~~~~~~l~V~~~~---------------------------------~~~~~~~~~~~~~~~~~~g~~ 131 (241)
T 3grw_A 85 GNYTCVVENKFGSIRQTYTLDVLERS---------------------------------PHRPILQAGLPANQTAVLGSD 131 (241)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCC---------------------------------CCCCEEEECTTCSEECCTTCC
T ss_pred EEEEEEEeecCCceEEEEEEEEeccC---------------------------------CCCceeecCCCccceecCCCE
Confidence 99999999999998888888887532 11233 333455677889999
Q ss_pred EEEEEEEeecCCCccEEEEEE----CCEeccCCCcEEEE--e------eCcEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy2145 333 AHFEARLIPVGDSKLKVTWLR----NGVPIQASNRVSTM--H------DFGYVALNFKYTYPEDSGTYTCRAVNELGEAV 400 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~----~g~~l~~~~~~~~~--~------~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 400 (808)
+.|.|.+ .|.|.+.+.|++ +|..+..+...... . .....+|.|.++..+|+|.|+|.|.|..|...
T Consensus 132 v~L~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 209 (241)
T 3grw_A 132 VEFHCKV--YSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAE 209 (241)
T ss_dssp EEEEEEE--ECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred EEEEEEE--ecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEE
Confidence 9999999 789999999999 88888665432111 0 11345799999999999999999999999999
Q ss_pred EEEEEEEEeccccc
Q psy2145 401 TSSTLFVESKASLQ 414 (808)
Q Consensus 401 ~~~~l~V~~~~~~~ 414 (808)
.++.|.|..+|.+.
T Consensus 210 ~~~~l~V~~~p~~~ 223 (241)
T 3grw_A 210 KAFWLSVHGPRAAE 223 (241)
T ss_dssp EEEEEEC-------
T ss_pred EEEEEEecCCCCCC
Confidence 99999998876543
No 147
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.89 E-value=1.2e-22 Score=200.52 Aligned_cols=192 Identities=23% Similarity=0.383 Sum_probs=145.8
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC-----ceEEEecCceE--EEEEccCCCCCc
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS-----RFTETNNFGFV--ALDIMQCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~-----~~~~~~~~~~~--~L~I~~~~~~D~ 253 (808)
..||.|...+.++.+.+|++++|.|.+ .+.|.+.+.|+++|..+.... ......++... .|.|.+++.+|+
T Consensus 7 ~~pp~i~~~p~~~~v~~G~~v~l~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 7 DFPPRIVEHPSDLIVSKGEPATLNCKA--EGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp CEEEEEEECCCCEEECTTCCEEECCEE--EEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred cCCcceecCCCceEEeCCCcEEEEEEc--CCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 458999999999999999999999999 467888999999999986432 12222222221 345677899999
Q ss_pred EEEEEEEEeCceeE-EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCe
Q psy2145 254 GVYTCRAVNALGQA-VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~~g~~-~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|..|.. ...+.|.|... ++.+...+....+.+|+.
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~------------------------------------~~~~~~~~~~~~~~~g~~ 128 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAIL------------------------------------RDDFRQNPSDVMVAVGEP 128 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEE------------------------------------CSSCSBCCCCEEEETTSC
T ss_pred eEEEEEEECCCCceeecceEEEEEec------------------------------------cccceeCCCceEecCCCc
Confidence 99999999998876 34677777542 334445556678899999
Q ss_pred EEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEEEEEecc
Q psy2145 333 AHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STLFVESKA 411 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~~ 411 (808)
+.|.|.+. .+.|.+.+.|+++|..+..........+ + .|.|.++..+|+|.|+|.|.|..|...+. +.|.|..+|
T Consensus 129 ~~l~C~~~-~~~p~~~v~W~~~~~~l~~~~~~~~~~~-~--~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P 204 (212)
T 2v9r_A 129 AVMECQPP-RGHPEPTISWKKDGSPLDDKDERITIRG-G--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERP 204 (212)
T ss_dssp EEEECBCC-CEESCCEEEEEETTEEECTTSTTEEEET-T--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEEecC-CCCCCCEEEEEECCccCCCCcceEEccC-C--eEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCc
Confidence 99999862 4788899999999999986543322222 3 79999999999999999999999987665 899999877
Q ss_pred ccc
Q psy2145 412 SLQ 414 (808)
Q Consensus 412 ~~~ 414 (808)
.+.
T Consensus 205 ~~~ 207 (212)
T 2v9r_A 205 SFV 207 (212)
T ss_dssp ---
T ss_pred hHh
Confidence 655
No 148
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.89 E-value=5e-23 Score=209.62 Aligned_cols=208 Identities=17% Similarity=0.162 Sum_probs=128.2
Q ss_pred ccccccccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCC-----CceEEEEeC--C
Q psy2145 18 SSKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDS-----NLKVEWFKN--G 90 (808)
Q Consensus 18 ~~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p-----~~~v~W~~~--g 90 (808)
.++.+|.|.|+|.|... ............+.+...|..+ .+.+|++++|.|.+.+ .| .+.|.|||+ |
T Consensus 10 ~v~~~dsg~Y~C~a~g~---~~~~~~~~~~~~~~~~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~~v~W~k~~~g 83 (254)
T 2c1o_A 10 LVRPGTSVKLSCKASGY---SFTNYWMNWLRELVMTQSPLTL-SVTIGQPASISCKSSQ--SLLYSNGKTYLNWLLQRPG 83 (254)
T ss_dssp -------------------------------CCCEEEECSEE-EECTTSCEEEEEEESS--CCBCSSSCBCEEEEEECTT
T ss_pred eecCCccEEEEEcCchh---hhhhhhhheeeceeEEeCCceE-EecCCCcEEEEeeccC--cccccCCCCceEEEEeCCC
Confidence 37899999999999822 1111111111123344557777 8999999999999984 45 489999984 3
Q ss_pred EEee------------ccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceE-EEEEEEEecCCCcccccccccc
Q psy2145 91 RPVT------------IGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAE-VQATLQCRGSAGILTSTQNETG 157 (808)
Q Consensus 91 ~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~ 157 (808)
..+. ...|+.+..+++..+|.|.+++.+|+|.|+|.|.|..+... ....|.|...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~------------ 151 (254)
T 2c1o_A 84 QSPKRLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRA------------ 151 (254)
T ss_dssp SCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCC------------
T ss_pred CCceEEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCC------------
Confidence 3221 13678877777888999999999999999999998765432 2335655321
Q ss_pred ceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC--ceEEE
Q psy2145 158 LEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS--RFTET 235 (808)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~~ 235 (808)
..+|.+...+....+.+|+.++|.|.+.+...+.+.|.|+|||.++..+. .....
T Consensus 152 -----------------------~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 208 (254)
T 2c1o_A 152 -----------------------DAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 208 (254)
T ss_dssp -----------------------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCC
T ss_pred -----------------------CCCCeeEeecCChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccc
Confidence 34677776655544557889999999964222236799999999987651 11111
Q ss_pred e-cCc----eEEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 236 N-NFG----FVALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 236 ~-~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
. .++ ...|.|.++..+|+|.|+|.|.|....
T Consensus 209 ~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 244 (254)
T 2c1o_A 209 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST 244 (254)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCC
Confidence 1 111 347999999999999999999997654
No 149
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.89 E-value=2.7e-22 Score=200.80 Aligned_cols=194 Identities=20% Similarity=0.352 Sum_probs=151.2
Q ss_pred CCCCeEEeec----CceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce---EEEecCceEEEEEccCCCCCc
Q psy2145 181 TQAPIFTTSL----KNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF---TETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~----~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~---~~~~~~~~~~L~I~~~~~~D~ 253 (808)
..+|.|...+ ....+.+|++++|.|.+ .+.|.+.|.|+|+|..+....++ ..... ..+|.|.+++.+|+
T Consensus 13 ~~~P~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~ 88 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPA--GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ--HWSLIMESVVPSDK 88 (231)
T ss_dssp CEEEEESCGGGGCCSCEEEETTSCEEEECCE--EEESCCEEEEEETTEECCGGGSTTCCEEEGG--GTEEEECSCCGGGC
T ss_pred ccCCccccccccCceeEEEccCCCEEEEEec--ccCCCCeEEEEECCccccccccccceeeecC--cceEEEecCCcccC
Confidence 4578887766 67889999999999999 46788899999999998765443 22222 23799999999999
Q ss_pred EEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeec-cCCCceEeecCCe
Q psy2145 254 GVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFT-QPMRDIHVAENQA 332 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~-~~~~~~~v~~G~~ 332 (808)
|.|+|.|.|..|.....+.|.|...+. .+|.+. ..+....+.+|+.
T Consensus 89 G~Y~C~~~n~~~~~~~~~~l~V~~~~~---------------------------------~~p~~~~~~~~~~~~~~g~~ 135 (231)
T 3ojm_B 89 GNYTCVVENEYGSINHTYHLDVVERSR---------------------------------HRPILQAGLPANASTVVGGD 135 (231)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECCCC---------------------------------CCCEECTTCSCCEEEETTCC
T ss_pred EEEEEEEecccCcccccEEEEEEcCCC---------------------------------CCCceeeccCCceEEEeCCc
Confidence 999999999999988888898875321 233333 3345678899999
Q ss_pred EEEEEEEeecCCCccEEEEEE----CCEeccCCCcE--EEEee-----CcEEEEEEccCCCCCCeEEEEEEEcCCcceEE
Q psy2145 333 AHFEARLIPVGDSKLKVTWLR----NGVPIQASNRV--STMHD-----FGYVALNFKYTYPEDSGTYTCRAVNELGEAVT 401 (808)
Q Consensus 333 ~~l~C~~~~~g~p~~~v~W~~----~g~~l~~~~~~--~~~~~-----~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~ 401 (808)
+.|.|.+ .+.|.+.+.|++ +|..+..+... ..... ....+|.|.++..+|+|.|+|.|.|..|....
T Consensus 136 ~~l~C~~--~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~ 213 (231)
T 3ojm_B 136 VEFVCKV--YSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQ 213 (231)
T ss_dssp EEEECCE--ECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEE
T ss_pred EEEEEEE--ecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEee
Confidence 9999998 789999999999 88877654321 11111 11136999999999999999999999999999
Q ss_pred EEEEEEEecccc
Q psy2145 402 SSTLFVESKASL 413 (808)
Q Consensus 402 ~~~l~V~~~~~~ 413 (808)
++.|.|..+|..
T Consensus 214 ~~~l~V~~~p~~ 225 (231)
T 3ojm_B 214 SAWLTVLPKQQA 225 (231)
T ss_dssp EEEEEEECCC--
T ss_pred EEEEEEecCCCC
Confidence 999999877643
No 150
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.89 E-value=3.5e-22 Score=196.48 Aligned_cols=173 Identities=18% Similarity=0.293 Sum_probs=133.8
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC-------------------CCCeEEEeeCcEEEEEECCCCCCCCE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-------------------SSRITTKHDFGYVAMDLSHVRAEDEG 575 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-------------------~~~~~~~~~~~~~~L~I~~v~~~D~G 575 (808)
.+.+|+++.|.|.+ .+.|.+.|.|+|++..... ..++.+..+ + +|.|.+++.+|+|
T Consensus 10 ~v~~G~~v~L~C~~--~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~-~--~L~i~~v~~~D~G 84 (208)
T 3r4d_A 10 QVAEDNNVLLLVHN--LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN-G--SLLFQMITMKDMG 84 (208)
T ss_dssp EEETTCCEEEEEEC--CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT-S--CEEECSCCGGGCE
T ss_pred eeecCCcEEEEEeC--CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC-C--eEEEccccccCCe
Confidence 57899999999997 7889999999998643221 223333222 2 6999999999999
Q ss_pred EEEEEEEeCC-eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceE
Q psy2145 576 IYICKATNAL-GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSA 654 (808)
Q Consensus 576 ~Y~C~a~N~~-G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 654 (808)
.|+|.+.|.. +.....+.|.|...+. +|.+..... . +.+|+.+
T Consensus 85 ~Y~C~~~~~~~~~~~~~~~l~V~~~~~---------------------------------~p~i~~~~~--~-~~~g~~v 128 (208)
T 3r4d_A 85 VYTLDMTDENYRRTQATVRFHVHQPVT---------------------------------QPFLQVTNT--T-VKELDSV 128 (208)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEECCCC---------------------------------CCEEEESCS--S-CCTTCCE
T ss_pred EEEEEEEcccCceeEEEEEEEeccCCC---------------------------------CCEEecCCc--e-EeeCCCE
Confidence 9999999985 6777778888875422 244443322 2 8899999
Q ss_pred EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEE-EEEEEEEeCCC
Q psy2145 655 HYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVS-STSLKVKSKSD 733 (808)
Q Consensus 655 ~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~-s~~l~V~~~p~ 733 (808)
.|.|.+ .|.| |.|.|++||..+..+.++.+..+++ +|.|.++..+|+|.|+|.|.|.+|...+ .++|.|..+|-
T Consensus 129 ~l~C~~--~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~ 203 (208)
T 3r4d_A 129 TLTCLS--NDIG-ANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPH 203 (208)
T ss_dssp EEEEEC--SCTT-CEEEEEETTEECCCCSSEEEETTTT--EEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC----
T ss_pred EEEEEC--CCCC-CceEEEECCEeCCCCCCeEEcCCCC--EEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCc
Confidence 999999 7766 8999999999999888887765543 8999999999999999999999998766 47777766643
No 151
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.88 E-value=1.1e-22 Score=194.34 Aligned_cols=170 Identities=18% Similarity=0.294 Sum_probs=129.9
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCc-EEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTL-KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~-~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.|...+... .+.+|+++.|.|.+ .+.|.+ .+.|+|+|..+.... + .|.|.+++.+|+|.|+|.
T Consensus 3 ~~P~i~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~i~W~~~~~~~~~~~--------~--~L~i~~v~~~d~G~Y~C~ 69 (176)
T 1f2q_A 3 QKPKVSLNPPWN-RIFKGENVTLTCNG--NNFFEVSSTKWFHNGSLSEETN--------S--SLNIVNAKFEDSGEYKCQ 69 (176)
T ss_dssp -CCCCEEESSCS-EEETTCCEEEECCT--TCC----CCEEEETTEECSCCS--------S--EEEECSCCGGGCEEEEEE
T ss_pred CCCEEEcCCCCc-ceecCCcEEEEEeC--CCCCCcceEEEEECCeECCCCc--------e--EEEEeccceecCEEEEEE
Confidence 367777777765 58999999999998 777775 699999999887532 2 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRV 660 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v 660 (808)
|.|..++. .+.|.|... |.+... . ...+.+|+.+.|.|.+
T Consensus 70 ~~~~~~s~--~~~l~V~~~------------------------------------~~~~~~-~-~~~~~~g~~~~l~C~~ 109 (176)
T 1f2q_A 70 HQQVNESE--PVYLEVFSD------------------------------------WLLLQA-S-AEVVMEGQPLFLRCHG 109 (176)
T ss_dssp CTTSSCCC--CEEEEEECS------------------------------------SEEEEE-S-CSEEETTSCEEEEEEE
T ss_pred cCCccccc--cEEEEEeCc------------------------------------ceeecC-C-cceeeCCCCEEEEEEe
Confidence 99977644 455666531 222222 1 2467899999999998
Q ss_pred eeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCc-ceEEEEEEEEEeCCC
Q psy2145 661 VPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAG-EAVSSTSLKVKSKSD 733 (808)
Q Consensus 661 ~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G-~~~~s~~l~V~~~p~ 733 (808)
. .|.|.+.|.|+|||..+.... ....|.|.++..+|+|.|+|.|.|..| ..+.++.|.|..+|.
T Consensus 110 ~-~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 110 W-RNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp G-GGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC
T ss_pred c-CCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCC
Confidence 4 367888999999999985432 123899999999999999999999755 445568999998874
No 152
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.88 E-value=3.8e-22 Score=190.31 Aligned_cols=167 Identities=17% Similarity=0.314 Sum_probs=128.2
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcE-EEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLK-VEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~-v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.+...+... .+.+|+.+.|.|.+ .+.|.+. +.|+|+|..+.... + .|.|.+++.+|+|.|+|.
T Consensus 6 ~~p~i~~~p~~~-~v~~G~~v~L~C~~--~~~p~~~~~~W~~~~~~~~~~~--------~--~L~i~~~~~~d~G~Y~C~ 72 (175)
T 1fnl_A 6 PKAVVFLEPQWY-SVLEKDSVTLKCQG--AYSPEDNSTQWFHNESLISSQA--------S--SYFIDAATVNDSGEYRCQ 72 (175)
T ss_dssp CCCEEEEESCCS-EEETTCCEEEEEEC--CCBTTBCCCEEEETTEEEESSC--------S--EEEESSCCGGGCEEEEEE
T ss_pred CCCEEEEcCCce-eeeCCCcEEEEeeC--CCCCCCcceEEEECCEEccCCc--------e--EEEEeCCCcccCEEEEEE
Confidence 467777766664 58999999999998 7888776 88999999876422 2 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRV 660 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v 660 (808)
|.|..+ +..+.|.|... |.+... . ...+.+|+.+.|.|.+
T Consensus 73 ~~n~~~--s~~~~l~V~~~------------------------------------~~~~~~-~-~~~~~~g~~~~l~C~~ 112 (175)
T 1fnl_A 73 TNLSTL--SDPVQLEVHIG------------------------------------WLLLQA-P-RWVFKEEDPIHLRCHS 112 (175)
T ss_dssp CSSSCC--CCCEEEEEECS------------------------------------SEEEEC-S-CSEEETTCCEEEEEEE
T ss_pred eeCCcc--cccEEEEEeCC------------------------------------CceeeC-C-CceecCCCCEEEEEEc
Confidence 999665 34566666632 222222 1 2457899999999999
Q ss_pred eeCCCCC-eEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc-eEEEEEEEEEeC
Q psy2145 661 VPVGDPT-MRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE-AVSSTSLKVKSK 731 (808)
Q Consensus 661 ~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~s~~l~V~~~ 731 (808)
.|.|+ +.|.|+|||..+... ... ..|.|.++..+|+|.|+|.|.|..|. .+.++.|.|.++
T Consensus 113 --~~~~~~~~~~W~k~g~~~~~~------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 113 --WKNTALHKVTYLQNGKDRKYF------HHN--SDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp --CTTCCCEEEEEEETTEEEEEE------EEC--CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred --CCCCCceEEEEEECCeEccCC------CCC--CEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeCC
Confidence 67655 599999999988421 122 37999999999999999999997764 555778888753
No 153
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.88 E-value=2.1e-22 Score=198.91 Aligned_cols=189 Identities=18% Similarity=0.154 Sum_probs=130.4
Q ss_pred ccceeecCCCCccccCCC--CcEEEEEEEeeCCCCCceEEEEe---CCEEeeccCcEEEEeeCCeEEEEEcccCcCCCee
Q psy2145 48 FIYYTVTKPKSIENLRER--GHAHFECKLEPVTDSNLKVEWFK---NGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGT 122 (808)
Q Consensus 48 ~~~~~~~~p~~~~~v~~G--~~v~l~C~~~~~~~p~~~v~W~~---~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~ 122 (808)
|++.....|..+ .+.+| ++++|.|.+. + |.+.+.|++ +|..+..+.++..... + .|.|.+++.+|+|.
T Consensus 6 f~~~~~~~p~~v-~v~eG~~~~v~L~C~~~--~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~-~--~l~I~~v~~~D~G~ 78 (213)
T 2x1w_L 6 FIASVSDQHGVV-YITENKNKTVVIPCLGS--I-SNLNVSLCARYPEKRFVPDGNRISWDSK-K--GFTIPSYMISYAGM 78 (213)
T ss_dssp BCCC----CEEE-EECCSTTCEEEECCCBS--S-TTCCEEEEEETTTEEECCCSSSCEEETT-T--EEEEEGGGTTTCSE
T ss_pred ccccCcCCceEE-EEecCCCccEEEeeccC--C-CCcEEEEEhhcCCCccccCCCcccccCC-c--cEEEccCChhcCce
Confidence 333333456777 89999 9999999997 3 668999988 4777776655543322 2 59999999999999
Q ss_pred EEEEEEecCcceEEE-EEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC-ceeecCCCe
Q psy2145 123 YTCRAVNLVGFAEVQ-ATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK-NCEIKEGQR 200 (808)
Q Consensus 123 Y~C~a~n~~g~~~~~-~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~~~v~~G~~ 200 (808)
|+|.|.|..+...+. +.|.|.. ..+|.+...+. .+.+.+|++
T Consensus 79 Y~C~a~n~~~~~~s~~~~l~v~~------------------------------------~~~p~~~~~~~~~~~v~~G~~ 122 (213)
T 2x1w_L 79 VFCEAKINDESYQSIMYIVVVVG------------------------------------YRIYDVVLSPSHGIELSVGEK 122 (213)
T ss_dssp EEEEEC----CEECCCEEEEECB------------------------------------CCEEEEEEESCSCEEEETTCC
T ss_pred EEEEEEECCeeEEEEEEEEEEeC------------------------------------CcccceEEcCCCCeEEcCCCC
Confidence 999999854433222 4555531 12344544444 458999999
Q ss_pred EEEEEEEeecCCCCeEEEEeeCCEEccCCCc-eEEEe-------cCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEE
Q psy2145 201 AHFECRLIPVSDNTMKVEWFHNNVPIKSGSR-FTETN-------NFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGN 272 (808)
Q Consensus 201 v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~-~~~~~-------~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 272 (808)
++|.|.+.+...+.+.+.|+++|..+..... ..... .....+|.|.+++.+|+|.|+|.|.|..|....++.
T Consensus 123 v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~ 202 (213)
T 2x1w_L 123 LVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTF 202 (213)
T ss_dssp EEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEE
Confidence 9999999543344568999999887543211 10100 112347999999999999999999999999999999
Q ss_pred EEEeeCC
Q psy2145 273 LLVHSKK 279 (808)
Q Consensus 273 l~V~~~~ 279 (808)
|.|..+|
T Consensus 203 l~V~~~p 209 (213)
T 2x1w_L 203 VRVHEDP 209 (213)
T ss_dssp EEEEC--
T ss_pred EEEeccc
Confidence 9998755
No 154
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.88 E-value=8.1e-23 Score=201.89 Aligned_cols=174 Identities=20% Similarity=0.342 Sum_probs=132.9
Q ss_pred cccCCCceEEEEEEeeCCCC----CcEEEEEE----------------CCEecCC-----CCCeEEEe---eCcEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP----TLKVEWFR----------------NEKPLED-----SSRITTKH---DFGYVAMDL 566 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P----~~~v~W~k----------------~g~~l~~-----~~~~~~~~---~~~~~~L~I 566 (808)
.+.+|+.+.|.|.+ .+.| .+.|.|+| +|..+.. ..++.+.. ..+..+|.|
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i 88 (214)
T 3jz7_A 11 EKAKGETAYLPCKF--TLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINV 88 (214)
T ss_dssp EEETTSCEEECCBC--CCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEE
T ss_pred EEecCCCEEEEEEE--ecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEE
Confidence 58899999999998 6666 46999998 5555432 34554432 123447999
Q ss_pred CCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 567 SHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 567 ~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
.+++.+|+|.|+|.|.|..|.....+.|.|...|.+ |.... ..
T Consensus 89 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~---------------------------------~~~~~----~~ 131 (214)
T 3jz7_A 89 TNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSG---------------------------------TRCFV----DG 131 (214)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBS---------------------------------CEEEE----ES
T ss_pred ccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCC---------------------------------ceeee----ec
Confidence 999999999999999999999999999999875442 11111 12
Q ss_pred cccCCceEEEEEEEeeCCCCCeEEEEEEC--CEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 647 EIMEGQSAHYDCRVVPVGDPTMRFEWFVN--GVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P~p~i~W~~~--g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
.+.+|+.+.|.|.+. .|.|.|.|.|+++ +..+.....+. ..+ .+|.|.++..+|+|.|+|.|+|.+|..+.++
T Consensus 132 ~~~~g~~v~l~C~~~-~g~p~~~v~W~~~~~~~~~~~~~~~~--~~~--~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~ 206 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPK-EGSLPLQFEWQKLSDSQTMPTPWLAE--MTS--PVISVKNASSEYSGTYSCTVQNRVGSDQCML 206 (214)
T ss_dssp CCBTTCCEEEEEECS-BCCSSCEEEEEECSTTCCCCGGGGGG--TTS--SEEEECSCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred ceecCCcEEEEecCC-CCCCCCEEEEEECCCCCccCccceec--cCC--CEEEEecCCHHHCEEEEEEEEcCCCcEEEEE
Confidence 478899999999984 5999999999995 44443222111 112 2899999999999999999999999999999
Q ss_pred EEEEEeCC
Q psy2145 725 SLKVKSKS 732 (808)
Q Consensus 725 ~l~V~~~p 732 (808)
.|.|..+|
T Consensus 207 ~l~V~~P~ 214 (214)
T 3jz7_A 207 RLDVVPPS 214 (214)
T ss_dssp EECCBCCC
T ss_pred EEEEeCCC
Confidence 99998553
No 155
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.88 E-value=5.6e-23 Score=200.18 Aligned_cols=174 Identities=10% Similarity=0.108 Sum_probs=117.7
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|...+.. .+.+|++++|.|.+ .+.|. .+.|+|+|..+....+. .........|.|.+++.+|+|.|+|.|
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 4 SKATLWAEPGS--VISRGNSVTIRCQG--TLEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp CBCEEEEESCS--EEETTCCEEEEEEC--CTTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCC--cccCCCeEEEEEeC--CCCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEEE
Confidence 46778776653 58899999999998 67766 99999999877532110 001233458999999999999999999
Q ss_pred EeCCeeEE--EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 582 TNALGEAV--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 582 ~N~~G~~~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|..|... ..+.|.|.... .+|.+.... . ..+.+|+.++|.|.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~---------------------------------~~p~i~~~~-~-~~v~~G~~v~L~C~ 122 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGFY---------------------------------NKPTLSALP-S-PVVTSGENVTLQCG 122 (196)
T ss_dssp EETTEECBCCCCEEEEEECSS---------------------------------CCCEEEC-------------CEEEEE
T ss_pred eCCCCcCCcCccEEEEecCCC---------------------------------CCCeEEccC-C-ccccCCCcEEEEEE
Confidence 99988543 44667776421 135554332 2 36889999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcE-EEEE-eCCEEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRF-HVQH-DFGYVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~-~~~~-~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+ .|.| +.|.|+|||..+...... .... ......|.|.++..+|+|.|+|.|.|..+.
T Consensus 123 ~--~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 123 S--RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp E--SSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred c--CCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 9 7888 999999999987532211 1111 112368999999999999999999999874
No 156
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.88 E-value=7e-23 Score=195.31 Aligned_cols=156 Identities=15% Similarity=0.250 Sum_probs=121.5
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEecC----------CCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLE----------DSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNA 584 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~----------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 584 (808)
.+.+|+.+.|.|...+.+.|.+.|.|+|++..|. ...++.+.. ++ +|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~-~g--sL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILA-NG--DLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECT-TS--CEEESSCCGGGCEEEEEEEEET
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECC-CC--cEEEcccccccCEEEEEEEEeC
Confidence 5789999999995322336778999999997542 345666633 33 5999999999999999999999
Q ss_pred CeeE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEee
Q psy2145 585 LGEA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVP 662 (808)
Q Consensus 585 ~G~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~ 662 (808)
.|.. ...+.|.|...+ .+|.+.. .+..++|.|.+
T Consensus 84 ~g~~~~~~~~~l~V~~~~---------------------------------~~p~i~~---------~~~~v~L~C~~-- 119 (176)
T 1hng_A 84 NGTRILNKALDLRILEMV---------------------------------SKPMIYW---------ECSNATLTCEV-- 119 (176)
T ss_dssp TCCEEEEEEEEEEEECCC---------------------------------CCCEEEE---------ETTTTEEEEEC--
T ss_pred CCCEEEEEEEEEEEeCCC---------------------------------CCCEEEe---------cCCcEEEEEEe--
Confidence 9987 666777776532 1244432 24459999999
Q ss_pred CCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2145 663 VGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKV 728 (808)
Q Consensus 663 ~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V 728 (808)
.|.|.|.|.|+|||.+|..+.+ +.|..+..+|+|.|+|.|.|.+|..++++.|.|
T Consensus 120 ~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 120 LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp SSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred cCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 8999999999999999876544 344467799999999999999999999888765
No 157
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.88 E-value=4.4e-22 Score=194.13 Aligned_cols=183 Identities=14% Similarity=0.185 Sum_probs=127.0
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCe-EEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRI-TTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.|...+.. .+.+|++++|.|.+ .+.|. .+.|+|+|..+....+. ......+ .|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 4 PKPTLWAEPGS--VITQGSPVTLRCQG--GQETQ-EYRLYREKKTAPWITRIPQELVKKG--QFPIPSITWEHTGRYRCY 76 (198)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CTTCC-CEEEEESSSCCHHHHTSCHHHHTTT--EEEESSCCGGGCEEEEEE
T ss_pred CCCeEeccCCC--cccCCCcEEEEEEe--cCCCc-EEEEEECCccccccccccccCCccc--EEEECCCCHHHCeEEEEE
Confidence 46788766553 58999999999998 67775 69999999877421110 0011122 799999999999999999
Q ss_pred EEeCC-e--eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 581 ATNAL-G--EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 581 a~N~~-G--~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
|.|.. | ..+..+.|.|...+ .+|.+.... . ..+.+|+.++|.
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~~~---------------------------------~~p~i~~~~-~-~~v~~G~~v~L~ 121 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTGAY---------------------------------IKPTLSAQP-S-PVVNSGGNVTLQ 121 (198)
T ss_dssp EEETTTEECCCCCCEEEEEECSS---------------------------------CCCEEEEES-C-SEEETTCCEEEE
T ss_pred EECCCCCcccCCccEEEEEcccc---------------------------------cCCccccCC-c-cccCCCCcEEEE
Confidence 99988 6 33455777776521 135554432 2 468899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCCCc-EEEEE-eCCEEEEEEccCCCCCcEEEEEEEEeCCcce-----EEEEEEEEE
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKMGSR-FHVQH-DFGYVTLDITKCVPADSGVYMCKAINRAGEA-----VSSTSLKVK 729 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~~~~-~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~-----~~s~~l~V~ 729 (808)
|.+ .|. .+.|.|+|||..+..... +.+.. .+....|.|.++..+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 122 C~~--~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 122 CDS--QVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEC--SSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred Eec--CCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 999 677 789999999998754322 12222 2235699999999999999999999998732 445667665
No 158
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.88 E-value=9.7e-22 Score=194.92 Aligned_cols=183 Identities=15% Similarity=0.278 Sum_probs=145.9
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
.+.++..|.++ .+.+|+.+.|.|.+. +.|.+.|.|+|+|..+..+.+ .+|.|.+++.+|+|.|+|.|.
T Consensus 18 ~~~i~~~p~~~-~v~~G~~v~L~C~~~--~~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d~G~Y~C~~~ 85 (218)
T 3k0w_A 18 GSKITVNPESK-AVLAGQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGNT---------SELIFNAVHVKDAGFYVCRVN 85 (218)
T ss_dssp -CCEEECCCCE-EEETTSBEEEECEET--TTTSSEEEEEETTEECTTCCS---------SEEEETTCCGGGCEEEEEEEE
T ss_pred CCEEEECCCCe-EEeCCCcEEEEeeec--CCCCCEEEEEECCEECCCCCC---------CEEEEccCChhhCeEeEEEEE
Confidence 45667788888 899999999999997 578889999999998875422 269999999999999999999
Q ss_pred ecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 129 NLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 129 n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
|..|.. ...+.|.|...+..... ........+|.+...+....+.+|+.+.|.|.+
T Consensus 86 n~~~~~~s~~~~l~V~~~~~~~~~-----------------------~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~ 142 (218)
T 3k0w_A 86 NNFTFEFSQWSQLDVCDIPESFQR-----------------------SVDGVSESKLQICVEPTSQKLMPGSTLVLQCVA 142 (218)
T ss_dssp CTTCCEECCCEEEEEECCCGGGCT-----------------------TCCSBCCSSCEEEECCCCEEECTTCCEEEECEE
T ss_pred cCCCCceeeEEEEEEEccCccccc-----------------------ccccccCCCceEEECCCceeecCCCcEEEEEEe
Confidence 987755 45577777654321100 001122456888888989999999999999999
Q ss_pred eecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCcee-EEEEEEEEEee
Q psy2145 208 IPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQ-AVTSGNLLVHS 277 (808)
Q Consensus 208 ~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~ 277 (808)
.+.|.+.|.|+++|..+..+... +|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..
T Consensus 143 --~g~p~~~v~W~~~~~~~~~~~~~---------~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 143 --VGSPIPHYQWFKNELPLTHETKK---------LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp --EBSSCCEEEEEETTEECTTCCSS---------EEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC
T ss_pred --cccCCCeEEEEECCEECCCCCCC---------EEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 57889999999999998765432 7999999999999999999998887 44567788765
No 159
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=197.80 Aligned_cols=181 Identities=20% Similarity=0.266 Sum_probs=139.0
Q ss_pred cCCCCccccCCCCcEEEEEE-EeeCCCCC-ceEEEEeCCEEeec--cCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEe
Q psy2145 54 TKPKSIENLRERGHAHFECK-LEPVTDSN-LKVEWFKNGRPVTI--GHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVN 129 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~-~~~~~~p~-~~v~W~~~g~~l~~--~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 129 (808)
..+..+ .+.+|+.+.|.|. +. +.|. +.+.|+|++..+.. ..+....... .+|.|.+++.+|+|.|+|.+.|
T Consensus 13 ~~~~~~-~v~~G~~v~L~C~~~~--~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~~~~ 87 (201)
T 3s97_C 13 EERPEV-RVKEGKGMVLLCDPPY--HFPDDLSYRWLLNEFPVFITMDKRRFVSQTN--GNLYIANVEASDKGNYSCFVSS 87 (201)
T ss_dssp SCCCCE-EEETTCCEEECCCCCS--EESSCCEEEEEESSTTCBCCCSSSEEECTTT--CCEEESSCCGGGCEEEEEEEEE
T ss_pred CCCceE-EEECCCCEEEeccccc--cCCCceEEEEEECCceeeeeeCCCeEEEcCC--CeEEECcCCcccCeEEEEEEEe
Confidence 344566 8999999999999 66 4577 89999999988752 3333333333 3699999999999999999999
Q ss_pred cCcceEE---EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEE
Q psy2145 130 LVGFAEV---QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECR 206 (808)
Q Consensus 130 ~~g~~~~---~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~ 206 (808)
..+.... ...+.+..... ....+|.+...+....+.+|+.+.|.|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~p~~~~~~~~~~~~~g~~~~l~C~ 136 (201)
T 3s97_C 88 PSITKSVFSKFIPLIPIPERT-------------------------------TKPYPADIVVQFKDVYALMGQNVTLECF 136 (201)
T ss_dssp GGGTEEEECCCEEEEEECCSS-------------------------------CCCEEEEEEEECCCEEEETTCCEEEEEE
T ss_pred cCCCcchhhcccceeeccccc-------------------------------cCCCCCceEecCCceEEecCCcEEEEEE
Confidence 7765543 23333322110 1134677887777888999999999999
Q ss_pred EeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEe
Q psy2145 207 LIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 207 ~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 276 (808)
+ .+.|.+.|.|++++..+....+ ....++ +|.|.++..+|+|.|+|.|.|..|....++.|.|+
T Consensus 137 ~--~g~p~p~v~W~~~~~~~~~~~~--~~~~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 137 A--LGNPVPDIRWRKVLEPMPSTAE--ISTSGA--VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp E--EEESCCEEEEEETTBCCCTTCE--EETTTT--EEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred c--cCCCCCceEEEeCCCcCCCcee--ecCCCC--EEEEccCChhhCEEEEEEEEecCCceeeeEEEEEe
Confidence 9 5778899999999998875533 233333 89999999999999999999999999999999885
No 160
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.88 E-value=9.1e-22 Score=192.19 Aligned_cols=174 Identities=15% Similarity=0.232 Sum_probs=128.6
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC-EecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE-KPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTAS 593 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g-~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~ 593 (808)
.+.+|+.+.|.|.+ .|.|.|.|.|+++. .++. .+ ....+....|.|.+++.+|+|.|+|.|.|..|..+..+.
T Consensus 12 ~~~~G~~v~L~C~~--~g~P~p~i~W~~~~~~~~~--~~--~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~ 85 (202)
T 1vca_A 12 LAQIGDSVSLTCST--TGCESPFFSWRTQIDSPLN--GK--VTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQ 85 (202)
T ss_dssp EEETTSCEEEEEEE--ESCSSCEEEEEETTCCCCS--SE--EEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEE
T ss_pred EEcCCCcEEEEEee--cCCCCCeEEEECCCCCCcc--ce--EEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEE
Confidence 45599999999999 78999999999843 3221 11 122334457999999999999999999999999888899
Q ss_pred EEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-CC--eEE
Q psy2145 594 MKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-PT--MRF 670 (808)
Q Consensus 594 l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~--p~i 670 (808)
|.|...|.. |.+.. . ..+.+|+.++|.|.+ .|. |. +.|
T Consensus 86 l~V~~~p~~---------------------------------~~~~~--~--~~~~~G~~~~L~C~~--~~~~p~~~~~i 126 (202)
T 1vca_A 86 VEIYSFPKD---------------------------------PEIHL--S--GPLEAGKPITVKCSV--ADVYPFDRLEI 126 (202)
T ss_dssp EEEEBCCSC---------------------------------CEEEE--S--SCEETTSCEEEEEEE--EEEBSGGGEEE
T ss_pred EEEEeCCCC---------------------------------CEeCC--c--eEEcCCCCEEEEEEE--CCcCCCCCeEE
Confidence 999865431 22221 1 458899999999999 554 43 589
Q ss_pred EEEECCEEccCCCcEEE----EEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc-------eEEEEEEEEEeCCC
Q psy2145 671 EWFVNGVELKMGSRFHV----QHDFGYVTLDITKCVPADSGVYMCKAINRAGE-------AVSSTSLKVKSKSD 733 (808)
Q Consensus 671 ~W~~~g~~l~~~~~~~~----~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-------~~~s~~l~V~~~p~ 733 (808)
.|+|||..|........ ........|.|..+..+|.|.|+|.|.|.+|. .+.+..|.|..+|.
T Consensus 127 ~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~ 200 (202)
T 1vca_A 127 DLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPK 200 (202)
T ss_dssp EEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC-
T ss_pred EEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCC
Confidence 99999998854211000 00112346789988889999999999999986 45688899988874
No 161
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.88 E-value=3.4e-21 Score=185.38 Aligned_cols=167 Identities=19% Similarity=0.256 Sum_probs=132.5
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATL 140 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 140 (808)
.+.+|++++|.|.+.+.+.|...+.|+|+|..|..+... .....|.|. +.+|+|.|+|.|.|. ....+.|
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l 78 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPE---PMGTANI 78 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEEST---TSCEEEE
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECC---cCcEEEE
Confidence 578999999999998533344499999999998866432 223467777 689999999999983 2356667
Q ss_pred EEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEE
Q psy2145 141 QCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEW 219 (808)
Q Consensus 141 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W 219 (808)
.| ..+|.+...+....+.+|+.++|.|.+ .+.| .+.|.|
T Consensus 79 ~V--------------------------------------~~~P~~~~~~~~~~~~~g~~~~l~C~~--~g~p~~~~i~W 118 (184)
T 3b5h_A 79 QL--------------------------------------HGPPRVKAVKSSEHINEGETAMLVCKS--ESVPPVTDWAW 118 (184)
T ss_dssp EE--------------------------------------CCSCCCEESCSEEEECTTSCEEEEEEC--CCSSCCCEEEE
T ss_pred EE--------------------------------------ecCCceeecCCCcEEcCCCcEEEEEEE--CCCCCCCeEEE
Confidence 66 346677777777789999999999999 6788 799999
Q ss_pred ee---CCE-EccC--CCceEEEecCceEEEEEccCC-CCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 220 FH---NNV-PIKS--GSRFTETNNFGFVALDIMQCL-PEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 220 ~~---~g~-~l~~--~~~~~~~~~~~~~~L~I~~~~-~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
++ ++. .+.. ..++.+..+++...|.|.++. .+|+|.|+|.|.|..|....++.|.|..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 119 YKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTEEEEEEEEEEEC-
T ss_pred EEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCCcceEEEEEEEec
Confidence 99 444 4432 256777777777799999999 8999999999999999999998888853
No 162
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.88 E-value=1.9e-22 Score=204.69 Aligned_cols=175 Identities=17% Similarity=0.269 Sum_probs=127.9
Q ss_pred cccCCCceEEEEEEeeCC---CCCcEEEEEECCEecC------------------------------CCCCeEEEeeCcE
Q psy2145 515 AVEEGKNAHFSCRLIPVG---DPTLKVEWFRNEKPLE------------------------------DSSRITTKHDFGY 561 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g---~P~~~v~W~k~g~~l~------------------------------~~~~~~~~~~~~~ 561 (808)
.+.+|+.+.|.|.+ .+ .|.+.|.|+|++.... ...|+.+.. .+.
T Consensus 13 ~v~~G~~v~L~C~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~ 89 (250)
T 2fbo_J 13 EVHAGGTVELPCSY--QLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN-LAA 89 (250)
T ss_dssp EECTTSCEEECCEE--EECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-TTS
T ss_pred EEecCCeEEEEEEe--EcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-CCc
Confidence 68999999999999 45 8889999999985431 112332222 123
Q ss_pred EEEEECCCCCCCCEEEEEEEEeCCeeE-----EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC
Q psy2145 562 VAMDLSHVRAEDEGIYICKATNALGEA-----VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP 636 (808)
Q Consensus 562 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~-----~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P 636 (808)
.+|.|.+++.+|+|.|+|.|.|..+.. ..++.|.|...+. +|
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~---------------------------------~~ 136 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTP---------------------------------SN 136 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSC---------------------------------CS
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCC---------------------------------CC
Confidence 479999999999999999999987743 5677787765321 13
Q ss_pred eEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEE----------------------EEEeCCEE
Q psy2145 637 IFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFH----------------------VQHDFGYV 694 (808)
Q Consensus 637 ~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~----------------------~~~~~~~~ 694 (808)
.+.........+.+|+.+.|.|.+ .|.|.|.|.|+|+|..+....... .... +..
T Consensus 137 ~~~~~~~~~~~v~~g~~v~L~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 213 (250)
T 2fbo_J 137 NVHVSTAEVVQVDEGNDITMTCPC--TDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GAR 213 (250)
T ss_dssp CCEECCCSEEECCTTCCEEECCCE--ESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTT
T ss_pred eEEEecCceEEecCCCcEEEEEEe--cCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-Ccc
Confidence 333333334567889999999999 799999999999999886533111 1111 124
Q ss_pred EEEEccCCCCCcEEEEEEEEe---CCcceEEEEEEEE
Q psy2145 695 TLDITKCVPADSGVYMCKAIN---RAGEAVSSTSLKV 728 (808)
Q Consensus 695 ~L~I~~v~~~D~G~Y~C~A~N---~~G~~~~s~~l~V 728 (808)
+|.|.++..+|+|.|+|.|.| .+|....++.|.|
T Consensus 214 ~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 214 NLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp EEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred EEEEecCCcccCEEEEEEecCCccccCccceeEEEeC
Confidence 899999999999999999999 5666777776654
No 163
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=6.7e-22 Score=194.99 Aligned_cols=178 Identities=20% Similarity=0.256 Sum_probs=134.9
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEc------------cCCCceEEEecCceEEEEEccCCCC
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPI------------KSGSRFTETNNFGFVALDIMQCLPE 251 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l------------~~~~~~~~~~~~~~~~L~I~~~~~~ 251 (808)
+.|...+.++.+.+|++++|.|.+ .+.|.+.|.|+|++..+ ....++.... .+|.|.+++.+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~ 75 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTY--SGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRK 75 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEE--ESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGG
T ss_pred ceEEecCCCeEEEcCCCEEEEeEe--CCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcc
Confidence 456677888999999999999999 47789999999987653 2234444443 28999999999
Q ss_pred CcEEEEEEEEeCce--eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeec
Q psy2145 252 DSGVYTCRAVNALG--QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAE 329 (808)
Q Consensus 252 D~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~ 329 (808)
|+|.|+|.|.|..| .....+.|.|..++ .+...+....+.+
T Consensus 76 D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p-------------------------------------~~~~~~~~~~~~~ 118 (212)
T 1f97_A 76 DNGEYTCMVSEEGGQNYGEVSIHLTVLVPP-------------------------------------SKPTISVPSSVTI 118 (212)
T ss_dssp GCEEEEEEEEETTSSSEEEEEEEEEEEBCC-------------------------------------CCCEEECCSEEET
T ss_pred cCeEEEEEEEccCCCcccEEEEEEEEEcCC-------------------------------------CCcccCCccccCC
Confidence 99999999999877 55667777776533 2222223456889
Q ss_pred CCeEEEEEE-EeecCCCccEEEEEECCE-eccCCCc---------EEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 330 NQAAHFEAR-LIPVGDSKLKVTWLRNGV-PIQASNR---------VSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 330 G~~~~l~C~-~~~~g~p~~~v~W~~~g~-~l~~~~~---------~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
|+.+.|.|. + .+.|.+.+.|+++|. .+..... +..... ...|.|.++..+|+|.|+|.|.|..|.
T Consensus 119 g~~~~l~C~~~--~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~ 194 (212)
T 1f97_A 119 GNRAVLTCSEH--DGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPK--SGDLIFDPVTAFDSGEYYCQAQNGYGT 194 (212)
T ss_dssp TSCEEEEEECS--CCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTT--TCCEEESSCCGGGCEEEEEEEECSSSC
T ss_pred CCeEEEEEEcc--cCcCCCEEEEEeCCcccccccccccccccCceeEecCC--CceEEEEecChhhCcEEEEEEccccCC
Confidence 999999999 5 789999999999999 8876433 222222 237999999999999999999999999
Q ss_pred eEEE--EEEEEE
Q psy2145 399 AVTS--STLFVE 408 (808)
Q Consensus 399 ~~~~--~~l~V~ 408 (808)
...+ +.|.|.
T Consensus 195 ~~~s~~~~l~V~ 206 (212)
T 1f97_A 195 AMRSEAAHMDAV 206 (212)
T ss_dssp CEECCCEEEEEE
T ss_pred ccccceEEEEEE
Confidence 8444 555555
No 164
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.87 E-value=1.7e-22 Score=194.63 Aligned_cols=160 Identities=14% Similarity=0.264 Sum_probs=125.2
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEe--cCC------------CCCeEEEe---eCcEEEEEECCCCCCCCEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKP--LED------------SSRITTKH---DFGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~--l~~------------~~~~~~~~---~~~~~~L~I~~v~~~D~G~Y 577 (808)
.+.+|+++.|.|.+ .+.|.+.+.|+|++.. +.. ..++.... ..+..+|.|.+++.+|+|.|
T Consensus 6 ~~~~G~~v~L~C~~--~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 6 LGKKGDTVELTCTA--SQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEETTSCEEECCBC--SSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEE--cCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 58899999999998 7899999999999863 211 12232221 23344799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 578 ICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
+|.|.|..| .+.|.|.... . .....+.+|+.++|.
T Consensus 84 ~C~~~~~~~----~~~l~V~~~~----------------------------------------~-~~~~~v~~g~~~~l~ 118 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGLT----------------------------------------A-NSDTHLLQGQSLTLT 118 (184)
T ss_dssp EEEETTEEE----EEEEEEEEEE----------------------------------------E-SSCSEEETTCCEEEE
T ss_pred EEEEEcCCC----cEEEEEEEec----------------------------------------C-CCCceeecCCCEEEE
Confidence 999999765 4455555311 0 112357899999999
Q ss_pred EEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 658 CRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 658 C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
|.+ .|.|.|.|.|+++|..+. ... ..|.|.++..+|+|.|+|.|.|..|..+.++.|.|.+.|.
T Consensus 119 C~~--~~~p~~~v~W~~~~~~~~--------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 182 (184)
T 2ny1_B 119 LES--PPGSSPSVQCRSPRGKNI--------QGG--KTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQK 182 (184)
T ss_dssp EEC--CTTCCCEEEEECTTSCEE--------EES--SEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCC
T ss_pred EEc--CCCCCCEEEEEeCCCccc--------cCc--eEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecCC
Confidence 999 789999999999986652 122 2899999999999999999999999999999999998764
No 165
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.87 E-value=8.7e-22 Score=189.48 Aligned_cols=162 Identities=13% Similarity=0.143 Sum_probs=122.8
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+|.|...+.. .+.+|++++|.|.+ .+ |.+.+.|+|+|... ....+ .|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~W~k~g~~~--------~~~~~--~L~i~~v~~~D~G~Y~C~ 70 (184)
T 2gi7_A 6 LPKPSLQALPSS--LVPLEKPVTLRCQG--PP-GVDLYRLEKLSSSR--------YQDQA--VLFIPAMKRSLAGRYRCS 70 (184)
T ss_dssp BCCCEEEEESCS--EEETTCCEEEEEEC--ST-TCSEEEEEETTTCC--------EESSS--EEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEeCCCc--cccCCCcEEEEEeC--CC-CCCEEEEEECCccc--------cCccc--EEEECcCChhhCceEEEE
Confidence 346777766553 58999999999998 56 78899999998761 12223 799999999999999999
Q ss_pred EEeCCeeEE--EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 581 ATNALGEAV--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 581 a~N~~G~~~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.|..|... ..+.|.|.... .+|.+.... ...+.+|+.++|.|
T Consensus 71 a~n~~g~~~~s~~~~l~V~~~~---------------------------------~~p~i~~~p--~~~v~~G~~v~l~C 115 (184)
T 2gi7_A 71 YQNGSLWSLPSDQLELVATGVF---------------------------------AKPSLSAQP--GPAVSSGGDVTLQC 115 (184)
T ss_dssp EEETTEEBCCCCCEEEEEESSS---------------------------------CCCEEEEEC--CCSSCCTTCEEEEE
T ss_pred EEcCCCccCCCCCEEEEecCcC---------------------------------CCCEEEeCC--CceecCCCcEEEEE
Confidence 999987433 34666664321 246665554 24688999999999
Q ss_pred EEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 659 RVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.+ .+.| +.+.|+|||..+....+.. .....|.|.++..+|+|.|+|.|.|..+.
T Consensus 116 ~~--~~~~-~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 116 QT--RYGF-DQFALYKEGDPAPYKNPER----WYRASFPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp EC--SSCC-CEEEEEECCCCTTSCCCCE----EEEESSSEEEETTCCSEEEEEEEECTTST
T ss_pred Ec--CCCC-cEEEEEECCCcCcceecCC----CceEEEEEccCCccCCeEEEEEEEeCCCC
Confidence 97 5554 6999999999887533221 12347999999999999999999998753
No 166
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.87 E-value=1.1e-21 Score=193.81 Aligned_cols=174 Identities=17% Similarity=0.276 Sum_probs=130.3
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEecC------------CCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPLE------------DSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|+++.|.|.+ .+.|.+.|.|+|. +..+. ...++......+..+|.|.+++.+|+|.|+|.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 11 SVALGQKATITCSG--DKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEETTSCEEEEEEC--SSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeCCCCEEEEEEc--CCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 68999999999999 7899999999982 22111 33577766677778999999999999999999
Q ss_pred EEeCCe---eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 581 ATNALG---EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 581 a~N~~G---~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
|.|..| .....+.|.|...+. .+|.+...... ..+.+|+.++|.
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~i~~~~~~-~~~~~g~~v~l~ 135 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPN--------------------------------AAPSVTLFPPS-SEELKTNQATLV 135 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCC--------------------------------BCCEEEEECCC-HHHHTTTEEEEE
T ss_pred eccCCcceeEEcCceEEEEeCCCC--------------------------------CCCeEEccCCC-cccccCCcEEEE
Confidence 999988 445557777774321 24666655543 345589999999
Q ss_pred EEEeeCCC-CC-eEEEEEECCEEccCCCcEE-EEEeCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 658 CRVVPVGD-PT-MRFEWFVNGVELKMGSRFH-VQHDFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 658 C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~-~~~~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
|.+ .|. |+ +.|.|+|||..|..+.... .....+ .+.|.|.++..+|+|.|+|.|+|..|....++.
T Consensus 136 C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 208 (213)
T 3mj8_L 136 CMI--NGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSLS 208 (213)
T ss_dssp EEE--EEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred EEe--eceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeeec
Confidence 999 564 44 5999999999997531110 000122 246999999999999999999999987776654
No 167
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.87 E-value=7.5e-23 Score=201.35 Aligned_cols=180 Identities=19% Similarity=0.325 Sum_probs=133.4
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEec------------CCCCCeEEEeeCcEEEEEECCCC
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPL------------EDSSRITTKHDFGYVAMDLSHVR 570 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l------------~~~~~~~~~~~~~~~~L~I~~v~ 570 (808)
++.|..++..+ .+.+|+.+.|.|.+ .+.|.+.+.|+|++..+ ....++.... ..|.|.+++
T Consensus 4 ~~~i~~~~~~~-~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~ 76 (209)
T 1nbq_A 4 SVTVHSSEPEV-RIPENNPVKLSCAY--SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVT 76 (209)
T ss_dssp CCEEECSCSBC-CEETTCCCEEECEE--ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCC
T ss_pred eEEEEcCCCce-EEEcCCCEEEEEEE--eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCC
Confidence 34555555555 68999999999999 68899999999988652 2234554443 279999999
Q ss_pred CCCCEEEEEEEEeCCe--eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccc
Q psy2145 571 AEDEGIYICKATNALG--EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEI 648 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G--~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 648 (808)
.+|+|.|+|.|.|..| ..+..+.|.|...|.+. ... ....+
T Consensus 77 ~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~------------------------------------~~~-~~~~~ 119 (209)
T 1nbq_A 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKP------------------------------------TVN-IPSSA 119 (209)
T ss_dssp TTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCC------------------------------------CCC-CBSEE
T ss_pred HHHCcEEEEEEecCCCCccceEEEEEEEecCCcCC------------------------------------Ccc-cccce
Confidence 9999999999999866 44456677776654321 111 12357
Q ss_pred cCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcE-------EEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceE
Q psy2145 649 MEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRF-------HVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAV 721 (808)
Q Consensus 649 ~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~-------~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~ 721 (808)
.+|+.+.|.|.+. .|.|.|.|.|+++|..+..+.+. .+........|.|.++..+|+|.|+|.|.|..|...
T Consensus 120 ~~g~~~~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 120 TIGNRAVLTCSEQ-DGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp ETTSCEEECCCCC-SCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred ecCCEEEEEEeCC-CCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence 8899999999853 69999999999999988765431 111112335899999999999999999999999995
Q ss_pred EEEEEE
Q psy2145 722 SSTSLK 727 (808)
Q Consensus 722 ~s~~l~ 727 (808)
.+..+.
T Consensus 199 ~s~~v~ 204 (209)
T 1nbq_A 199 TSNAVR 204 (209)
T ss_dssp ECCCBC
T ss_pred ccccEE
Confidence 554433
No 168
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.87 E-value=4e-22 Score=212.94 Aligned_cols=202 Identities=14% Similarity=0.083 Sum_probs=151.3
Q ss_pred cccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEE
Q psy2145 23 TSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPI 102 (808)
Q Consensus 23 d~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~ 102 (808)
+.|.|.|.+.+..... ....-..+.+...|..+ .+.+|++++|.|.+. +.|.+.+.|++++..+....+. .
T Consensus 136 ~~~~~~C~~~~~l~~l----~~~~c~~P~i~~~~~~~-~v~~G~~v~L~C~~~--g~p~p~i~W~~~~~~~~~~~~~--~ 206 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHM----PNASCGVPTLKVQVPNA-SVDVGDDVLLRCQVE--GRGLEQAGWILTELEQSATVMK--S 206 (347)
T ss_dssp GGGCCCCSSSSCSSCC----CCTTCCCCEEEEECCSS-CCBTTCCEEEEEEEE--CSSCCCCCEEESCCCSSEEECC--C
T ss_pred cccCCCCCCChHHhcC----CcccCCCCceeccCCce-EEeCCCcEEEEEEEe--cCCCCEEEEEcCCceeeccccc--c
Confidence 5789999987722111 11111245556667777 899999999999998 5788899999998765432211 1
Q ss_pred eeCCeEEEEEcccCcCCCe-eEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccC
Q psy2145 103 HDFGYVALDIIDTIPEDSG-TYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTT 181 (808)
Q Consensus 103 ~~~~~~~L~I~~~~~~D~G-~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (808)
......+|.|.+++.+|+| .|+|.|.|..|.....+.|.|.
T Consensus 207 ~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~-------------------------------------- 248 (347)
T 2ifg_A 207 GGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS-------------------------------------- 248 (347)
T ss_dssp CCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCB--------------------------------------
T ss_pred eecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEc--------------------------------------
Confidence 2345568999999999999 9999999999988777777663
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEec-------CceEEEEEccCCCCCcE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNN-------FGFVALDIMQCLPEDSG 254 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~-------~~~~~L~I~~~~~~D~G 254 (808)
.+|.+ ....+.+|+.++|.|.+ .+.|.+.|.|+|+|..+..+........ ....+|.|.+++.+|+|
T Consensus 249 ~~P~i----~~~~~~~g~~v~l~C~~--~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G 322 (347)
T 2ifg_A 249 FPASV----QLHTAVEMHHWCIPFSV--DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNG 322 (347)
T ss_dssp EEEEE----EECCCEESSSEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCE
T ss_pred CCCee----eeccCccCceEEEEEEe--eecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEECCCCcccCc
Confidence 23443 11224579999999999 4678899999999999986655433211 12347999999999999
Q ss_pred EEEEEEEeCceeEEEEEEEEEee
Q psy2145 255 VYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 255 ~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
.|+|.|.|..|....++.|.|..
T Consensus 323 ~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 323 NYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp EEEEEEEETTEEEEEEEEECSCC
T ss_pred eEEEEEecCCCceeeEEEEEecC
Confidence 99999999999999998888764
No 169
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.87 E-value=4.2e-21 Score=187.84 Aligned_cols=181 Identities=16% Similarity=0.169 Sum_probs=135.7
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCC-----eEEEEee-CCEEccCCCceEEEecC---ceEEEEEccCCCCCcEEE
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNT-----MKVEWFH-NNVPIKSGSRFTETNNF---GFVALDIMQCLPEDSGVY 256 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~-----~~v~W~~-~g~~l~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y 256 (808)
+..++..+.+.+|+++.|.|.+ .+.|. +.|.|+| ++.......++.+..+. +..+|.|.+++.+|+|.|
T Consensus 5 v~~p~~~v~v~~G~~v~L~C~~--~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (202)
T 3bp6_B 5 VTAPKEVYTVDVGSSVSLECDF--DRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQY 82 (202)
T ss_dssp EECSCSEEEEETTSCEEEEEEE--CTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEE
T ss_pred EecCCcCEEEeCCCcEEEEEEe--cCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEE
Confidence 3445556889999999999999 56665 8999999 55555555666655432 556899999999999999
Q ss_pred EEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEE
Q psy2145 257 TCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFE 336 (808)
Q Consensus 257 ~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~ 336 (808)
+|.|.|..|.....+.|.|...+ ..|.+.. ..+.+|+.+.|.
T Consensus 83 ~C~~~~~~~~~~~~~~l~V~~~~----------------------------------~~p~~~~----~~~~~g~~v~l~ 124 (202)
T 3bp6_B 83 RCLVICGAAWDYKYLTVKVKASY----------------------------------MRIDTRI----LEVPGTGEVQLT 124 (202)
T ss_dssp EEEEEETTEEEEEEEEEEEEBCC----------------------------------CCEEEEE----EECTTTCCEEEE
T ss_pred EEEEEeCCCcceEEEEEEecCCC----------------------------------CcccEEE----EecCCCCeEEEE
Confidence 99999999988888888887532 1222211 244679999999
Q ss_pred EEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEEEEEEec
Q psy2145 337 ARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSSTLFVESK 410 (808)
Q Consensus 337 C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 410 (808)
|.+ .|.|.+.|.|++++.++.. ......++.+..+.|..+..+|+|.|+|.|.|..|....++.|.|...
T Consensus 125 C~~--~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 125 CQA--RGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDPLSR 194 (202)
T ss_dssp EEE--EEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTTTEEEEEEECC---
T ss_pred EEc--cccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCcccccEEEEEecCc
Confidence 999 7899999999998876532 222223444567888899999999999999999999988888877543
No 170
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.87 E-value=4.3e-22 Score=196.64 Aligned_cols=178 Identities=18% Similarity=0.259 Sum_probs=132.4
Q ss_pred CCCccccCCCCcEEEEEEEeeCCCC--CceEEEEe----------------CCEEeec-----cCcEEEEe---eCCeEE
Q psy2145 56 PKSIENLRERGHAHFECKLEPVTDS--NLKVEWFK----------------NGRPVTI-----GHRFRPIH---DFGYVA 109 (808)
Q Consensus 56 p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~----------------~g~~l~~-----~~r~~~~~---~~~~~~ 109 (808)
+..+ .+.+|++++|.|.+.+.... .+.|.|+| +|..+.. ..|+.+.. ..+..+
T Consensus 7 ~~~v-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 85 (214)
T 3jz7_A 7 EQRI-EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDAS 85 (214)
T ss_dssp EEEE-EEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCC
T ss_pred CceE-EEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCccc
Confidence 4455 89999999999999852111 46999998 5554432 34555433 224558
Q ss_pred EEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
|.|.+++.+|+|.|+|.|.|..|.....+.|.|... |.+...
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~--------------------------------------p~~~~~ 127 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK--------------------------------------PSGTRC 127 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC--------------------------------------CBSCEE
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcC--------------------------------------CCCcee
Confidence 999999999999999999999998888888888643 222223
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeE
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQA 267 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 267 (808)
+....+.+|+.++|.|.+. .+.|.+.|.|++++ ..+...... ...++ +|.|.++..+|+|.|+|.|.|..|..
T Consensus 128 ~~~~~~~~g~~v~l~C~~~-~g~p~~~v~W~~~~~~~~~~~~~~~--~~~~~--~L~i~~~~~~d~G~Y~C~a~N~~g~~ 202 (214)
T 3jz7_A 128 FVDGSEEIGNDFKLKCEPK-EGSLPLQFEWQKLSDSQTMPTPWLA--EMTSP--VISVKNASSEYSGTYSCTVQNRVGSD 202 (214)
T ss_dssp EEESCCBTTCCEEEEEECS-BCCSSCEEEEEECSTTCCCCGGGGG--GTTSS--EEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eeecceecCCcEEEEecCC-CCCCCCEEEEEECCCCCccCcccee--ccCCC--EEEEecCCHHHCEEEEEEEEcCCCcE
Confidence 3334478999999999984 38889999999954 444322211 11223 89999999999999999999999999
Q ss_pred EEEEEEEEee
Q psy2145 268 VTSGNLLVHS 277 (808)
Q Consensus 268 ~~~~~l~V~~ 277 (808)
..++.|.|..
T Consensus 203 ~~~~~l~V~~ 212 (214)
T 3jz7_A 203 QCMLRLDVVP 212 (214)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEEEEeC
Confidence 9888888863
No 171
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.87 E-value=2.9e-21 Score=192.66 Aligned_cols=173 Identities=16% Similarity=0.230 Sum_probs=120.2
Q ss_pred cccCCCceEEEEEEeeCCCCCc---EEEEEECCEe-----------cCC------CCCeEEEe---eCcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL---KVEWFRNEKP-----------LED------SSRITTKH---DFGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~---~v~W~k~g~~-----------l~~------~~~~~~~~---~~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.|.+ .|.|+|++.. +.. ..|+.... ..+..+|.|.+++.
T Consensus 15 ~v~~G~~v~L~C~v--~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 92 (226)
T 4f80_A 15 LAMVGEDADLPCHL--FPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTA 92 (226)
T ss_dssp EEETTSCEEEEEEE--ESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCG
T ss_pred EEEcCCcEEEEEEE--ECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCch
Confidence 57899999999999 454443 6999987632 211 12333322 23566899999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|.....+.+.+...... +.. ...+.+|
T Consensus 93 ~D~G~Y~C~a~n~~~~~~~~v~~~~~~~~~~---------------------------------~~~------~~~~~~g 133 (226)
T 4f80_A 93 SDSGKYLCYFQDGDFYEKALVELKVAALGSD---------------------------------LHV------DVKGYKD 133 (226)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEBCCCC---------------------------------CEE------EEEEEET
T ss_pred HHCeeEEEEEECCCcEEEEEEEEeeccceec---------------------------------ccc------eeeeccC
Confidence 9999999999999998877666655432211 111 1346789
Q ss_pred ceEEEEEEEeeCC-CCCeEEEEEECC-EEccCCCcEEEEEe-CCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2145 652 QSAHYDCRVVPVG-DPTMRFEWFVNG-VELKMGSRFHVQHD-FGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKV 728 (808)
Q Consensus 652 ~~v~l~C~v~~~g-~P~p~i~W~~~g-~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V 728 (808)
+.+.|.|.+ .| .|.|.|+|+|++ ..+........... +.+..+.+..+..+|+|.|+|.|+|.+|..+.++.|.|
T Consensus 134 ~~v~l~c~~--~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v 211 (226)
T 4f80_A 134 GGIHLECRS--TGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISI 211 (226)
T ss_dssp TEEEEEEEE--EEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEEECC
T ss_pred CceeeEEEe--ccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEE
Confidence 999999999 56 699999999965 44443333222222 33456667788899999999999999999999999988
Q ss_pred Ee
Q psy2145 729 KS 730 (808)
Q Consensus 729 ~~ 730 (808)
..
T Consensus 212 ~e 213 (226)
T 4f80_A 212 AD 213 (226)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 172
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.87 E-value=6.3e-22 Score=195.71 Aligned_cols=184 Identities=14% Similarity=0.136 Sum_probs=131.0
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEE--EEEECCCCCCCCEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYV--AMDLSHVRAEDEGIYI 578 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~--~L~I~~v~~~D~G~Y~ 578 (808)
..+|.|...+.. .+.+|++|+|.|.+ .+ |.+.|.|+|+|..+....+. ........ .|.|.+++.+|+|.|+
T Consensus 7 ~~~P~i~~~p~~--~v~~G~~vtL~C~~--~~-~~~~~~W~k~g~~~~~~~~~-~~~~~~~~~~~L~I~~v~~~D~G~Y~ 80 (218)
T 1uct_A 7 FPMPFISAKSSP--VIPLDGSVKIQCQA--IR-EAYLTQLMIIKNSTYREIGR-RLKFWNETDPEFVIDHMDANKAGRYQ 80 (218)
T ss_dssp SCCCCEEESSCS--EEETTCCEEEEECC--CT-TCSEEEEEEEETTEEEECSE-ECC----CCCEEEECSCCGGGCEEEE
T ss_pred CCCCEEEecCCC--ccCCCCCEEEEEEc--CC-CCCEEEEEECCCcccccccc-cCCCCcceeeEEEEcccccccCEEEE
Confidence 346777766552 58999999999998 55 67899999999766432221 10111122 6999999999999999
Q ss_pred EEEEeCCeeEEE--EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEE
Q psy2145 579 CKATNALGEAVT--TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHY 656 (808)
Q Consensus 579 C~a~N~~G~~~~--s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l 656 (808)
|.|.|..|.... .+.|.|.... .+|.+.... + ..+.+|+.++|
T Consensus 81 C~a~n~~~~~~~s~~~~l~V~~~~---------------------------------~~P~i~~~p-~-~~v~~G~~v~L 125 (218)
T 1uct_A 81 CQYRIGHYRFRYSDTLELVVTGLY---------------------------------GKPFLSADR-G-LVLMPGENISL 125 (218)
T ss_dssp EEEEETTTEEEECCCEEEEEECSS---------------------------------CCCEEEESS-C-SEECTTCCCEE
T ss_pred EEEEcCCCceeecCCEEEEEcCcc---------------------------------cCCEEEeCC-C-CccCCCCCEEE
Confidence 999998764443 3566665321 246665443 2 46889999999
Q ss_pred EEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCc-----ceEEEEEEEEEeC
Q psy2145 657 DCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAG-----EAVSSTSLKVKSK 731 (808)
Q Consensus 657 ~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G-----~~~~s~~l~V~~~ 731 (808)
.|.+ .+.|.+.|.|+|||..+... . ........|.|.++..+|+|.|+|.|.|..+ ..+..+.|.|.++
T Consensus 126 ~C~~--~~~~~~~~~W~k~g~~~~~~-~---~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~ 199 (218)
T 1uct_A 126 TCSS--AHIPFDRFSLAKEGELSLPQ-H---QSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDS 199 (218)
T ss_dssp EEEC--SSSCCSEEEEEETTCSSCCS-E---EECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC--
T ss_pred EEeC--CCCCCCEEEEEECCCccccc-c---cCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecC
Confidence 9976 68888999999999887642 1 1223346899999999999999999999742 3344577888765
No 173
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.87 E-value=3.3e-21 Score=188.53 Aligned_cols=171 Identities=19% Similarity=0.258 Sum_probs=129.7
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeE-EEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMK-VEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
...|.|...+....+.+|++++|.|.+ .+.|.+. |.|+|||..+.... .+|.|.+++.+|+|.|+|.
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~--~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~ 72 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQG--AYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQ 72 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEEC--CSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcC--CCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEE
Confidence 356788888888899999999999999 5666654 99999999987653 2899999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
|.|. ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+
T Consensus 73 a~n~--~~s~~~~l~V~~-------------------------------------~p~~~~~~-~~~v~~G~~v~L~C~~ 112 (204)
T 3sgj_C 73 TQLS--TLSDPVQLEVHI-------------------------------------GWLLLQAP-RWVFKEEDPIHLRCHS 112 (204)
T ss_dssp ETTS--BCCCCEEEEEEC-------------------------------------SSEEEECS-CSEEETTCCEEEEEEE
T ss_pred eCCC--cccccEEEEEec-------------------------------------CceEecCC-ceeEeCCCcEEEEEEe
Confidence 9884 344566777764 23333322 2567899999999998
Q ss_pred eecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCc-ceEEEEEEEEEeccc
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELG-EAVTSSTLFVESKAS 412 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~~~ 412 (808)
. .+.|.+.|.|++||..+.. ....+ .|.|.++..+|+|.|+|.|.|..+ ..+..+.|.|...+.
T Consensus 113 ~-~~~p~~~v~W~k~g~~~~~------~~~~~--~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~ 177 (204)
T 3sgj_C 113 W-KNTALHKVTYLQNGKGRKY------FHHNS--DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLA 177 (204)
T ss_dssp G-GGCCCEEEEEEETTEEEEE------EEECC--CEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC---
T ss_pred c-CCCCCceEEEEECCcEeec------ccCCc--eEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCC
Confidence 3 3446689999999988642 11222 699999999999999999999544 444468888886654
No 174
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.86 E-value=6.1e-21 Score=187.61 Aligned_cols=178 Identities=17% Similarity=0.213 Sum_probs=136.3
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccC-------------------CCceEEEecCceEEEEEcc
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKS-------------------GSRFTETNNFGFVALDIMQ 247 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~-------------------~~~~~~~~~~~~~~L~I~~ 247 (808)
.+.+....+.+|++++|.|.. .+.+.+.|.|++++..... ..++.+..+ + +|.|.+
T Consensus 3 ~i~~~~~~v~~G~~v~L~C~~--~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~-~--~L~i~~ 77 (208)
T 3r4d_A 3 TIEAVPPQVAEDNNVLLLVHN--LPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSN-G--SLLFQM 77 (208)
T ss_dssp EEEEESSEEETTCCEEEEEEC--CCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTT-S--CEEECS
T ss_pred cccCccceeecCCcEEEEEeC--CCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecC-C--eEEEcc
Confidence 345556778999999999997 5788889999997543221 123333222 2 699999
Q ss_pred CCCCCcEEEEEEEEeCc-eeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceE
Q psy2145 248 CLPEDSGVYTCRAVNAL-GQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIH 326 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 326 (808)
++.+|+|.|+|.+.|.. +.....+.|.|...+ ..|.+......
T Consensus 78 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~p~i~~~~~~-- 121 (208)
T 3r4d_A 78 ITMKDMGVYTLDMTDENYRRTQATVRFHVHQPV----------------------------------TQPFLQVTNTT-- 121 (208)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEEECCC----------------------------------CCCEEEESCSS--
T ss_pred ccccCCeEEEEEEEcccCceeEEEEEEEeccCC----------------------------------CCCEEecCCce--
Confidence 99999999999999984 566677788886532 23455444333
Q ss_pred eecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE-EEE
Q psy2145 327 VAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS-STL 405 (808)
Q Consensus 327 v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~-~~l 405 (808)
+.+|+.+.|.|.+ .+.| +.|.|+++|..+..+.++.+..+++ +|.|.++..+|+|.|+|.|.|..|...+. +.|
T Consensus 122 ~~~g~~v~l~C~~--~~~p-p~i~W~~~g~~l~~~~~~~~~~~~~--~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l 196 (208)
T 3r4d_A 122 VKELDSVTLTCLS--NDIG-ANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRSNSIKL 196 (208)
T ss_dssp CCTTCCEEEEEEC--SCTT-CEEEEEETTEECCCCSSEEEETTTT--EEEESSCCGGGCEEEEEEEECTTCCEECCCEEE
T ss_pred EeeCCCEEEEEEC--CCCC-CceEEEECCEeCCCCCCeEEcCCCC--EEEEeccCHHhCeEEEEEEecCCCcccCCceee
Confidence 8899999999998 6766 7999999999999888887766554 79999999999999999999999998764 777
Q ss_pred EEEec
Q psy2145 406 FVESK 410 (808)
Q Consensus 406 ~V~~~ 410 (808)
.|..+
T Consensus 197 ~v~~~ 201 (208)
T 3r4d_A 197 DIIFD 201 (208)
T ss_dssp CCC--
T ss_pred eEEeC
Confidence 76654
No 175
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.86 E-value=2.9e-21 Score=190.79 Aligned_cols=180 Identities=16% Similarity=0.256 Sum_probs=134.5
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--CCEEee------------ccCcEEEEeeCCeEEEEEcccCcCCC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--NGRPVT------------IGHRFRPIHDFGYVALDIIDTIPEDS 120 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--~g~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~D~ 120 (808)
.|+.+ .+.+|++++|.|.+. +.|.+.|.||| ++..+. ...|+.+....+..+|.|.+++.+|+
T Consensus 6 ~~~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (213)
T 3mj8_L 6 QPPLV-SVALGQKATITCSGD--KLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDE 82 (213)
T ss_dssp CCSEE-EEETTSCEEEEEECS--STTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eCCcE-EEeCCCCEEEEEEcC--CCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhC
Confidence 34466 899999999999998 57888999999 222111 23577777777888999999999999
Q ss_pred eeEEEEEEecCc---ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 121 GTYTCRAVNLVG---FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 121 G~Y~C~a~n~~g---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|.|+|.|.|..| .....+.|.|...+ ..+|.+...+....+.+
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~~~~~~~~~~~ 128 (213)
T 3mj8_L 83 ADYYCQSWDGTNSAWVFGSGTKVTVLGQP----------------------------------NAAPSVTLFPPSSEELK 128 (213)
T ss_dssp EEEEEEEEETTTTEEEEBCCEEEEEECSC----------------------------------CBCCEEEEECCCHHHHT
T ss_pred EEEEEEeccCCcceeEEcCceEEEEeCCC----------------------------------CCCCeEEccCCCccccc
Confidence 999999999887 34555677775321 35788888877777779
Q ss_pred CCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce--EEEecCc---eEEEEEccCCCCCcEEEEEEEEeCceeEEEEE
Q psy2145 198 GQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF--TETNNFG---FVALDIMQCLPEDSGVYTCRAVNALGQAVTSG 271 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~--~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 271 (808)
|+.++|.|.+.+...+++.|.|+|||..+..+... ....++. ...|.|.++..+|+|.|+|.|.|..+....++
T Consensus 129 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 129 TNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 99999999996322333599999999998653111 0111111 12599999999999999999999987666554
No 176
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.86 E-value=2.4e-21 Score=183.80 Aligned_cols=164 Identities=18% Similarity=0.297 Sum_probs=124.2
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCC-CcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-TLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
+|.+...+... .+.+|+.+.|.|.+ .+.| .+.+.|+|+|..+..... .|.|.+++.+|+|.|+|.|
T Consensus 4 ~p~i~~~p~~~-~v~~G~~v~l~C~~--~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~ 70 (170)
T 3ry4_A 4 KAVLKLEPPWI-NVLQEDSVTLTCQG--ARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQT 70 (170)
T ss_dssp BCEEEEESCCS-EEETTCEEEEEEES--CCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEE
T ss_pred CCEEEeCCCCe-EEECCCcEEEEEEe--cCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEE
Confidence 35555555544 58899999999998 6776 678999999999976532 3667789999999999999
Q ss_pred EeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEe
Q psy2145 582 TNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVV 661 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~ 661 (808)
.|..++. .+.|.|... |.+... . ...+.+|+.+.|.|.+.
T Consensus 71 ~~~~~s~--~~~l~v~~~------------------------------------~~~~~~-~-~~~~~~g~~~~l~C~~~ 110 (170)
T 3ry4_A 71 GQTSLSD--PVHLTVLFE------------------------------------WLVLQT-P-HLEFQEGETIMLRCHSW 110 (170)
T ss_dssp TTSBCCC--CEEEEEECC------------------------------------SEEEEC-S-CSEECTTCCEEEEEEEG
T ss_pred eCCCceE--eEEEEEECC------------------------------------ceEecC-C-CceeecCCeEEEEEECC
Confidence 9865543 466666653 222221 1 24578899999999984
Q ss_pred eCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc-eEEEEEEEE
Q psy2145 662 PVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE-AVSSTSLKV 728 (808)
Q Consensus 662 ~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~-~~~s~~l~V 728 (808)
.|.|.+.|.|+|||..+... .....|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 111 -~~~p~~~~~W~~~g~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 111 -KDKPLVKVTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp -GGCCEEEEEEEETTEEEEEE--------SSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -CCCCCceEEEEECCeEcccc--------CCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 46678999999999987532 12237999999999999999999999997 444566665
No 177
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.86 E-value=3.9e-21 Score=187.09 Aligned_cols=174 Identities=10% Similarity=0.068 Sum_probs=128.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.. .+.+|++|+|.|.+ .+ +.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 3p2t_A 3 LPKPTLWAEPGS-VISWGNSVTIWCQG--TL-EAREYRLDKEESPAPWDRQN-PLEPKNKARFSIPSMTEDYAGRYRCYY 77 (196)
T ss_dssp BCCCEEEEESCS-EEETTCCEEEEEEC--CT-TCCEEEEEETTSCSCSEEEC-CCSSSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEccCCC-cCCCCCcEEEEeeC--CC-CCCEEEEEECCCCCcccccc-cccCCceEEEEeccCCcccCceEEEEE
Confidence 347888888877 88999999999998 45 67899999999887542211 111123448999999999999999999
Q ss_pred EeCcee--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 261 VNALGQ--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 261 ~n~~g~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
.|..|. .+..+.|.|.... .+|.+...+. ..+.+|+.++|.|.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~----------------------------------~~p~~~~~~~-~~v~~G~~v~L~C~ 122 (196)
T 3p2t_A 78 RSPVGWSQPSDPLELVMTGAY----------------------------------SKPTLSALPS-PLVTSGKSVTLLCQ 122 (196)
T ss_dssp EETTEEBCCCCCEEEEEECSS----------------------------------CCCEEEEESC-SEECTTCCEEEEEE
T ss_pred eCCCcccCCCccEEEEecCCC----------------------------------CCCEEEeCCc-ceecCCCeEEEEEe
Confidence 999883 3445677775421 2455554443 36789999999999
Q ss_pred EeecCCCccEEEEEECCEeccCCCcEEE-EeeCcEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQASNRVST-MHDFGYVALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~~~~~~-~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
+ .+ +.+.+.|+|+|..+........ ........|.|.++..+|+|.|+|.|.|..+
T Consensus 123 ~--~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 123 S--RS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp E--EE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred c--CC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 8 45 4568999999987765432211 1122334799999999999999999999887
No 178
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.86 E-value=8.1e-21 Score=181.08 Aligned_cols=167 Identities=20% Similarity=0.264 Sum_probs=128.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeE-EEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMK-VEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~-v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+....+.+|++++|.|.+ .+.|.+. +.|+|+|..+.... + +|.|.+++.+|+|.|+|.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~--~~~p~~~~~~W~~~~~~~~~~~--------~--~L~i~~~~~~d~G~Y~C~ 72 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQG--AYSPEDNSTQWFHNESLISSQA--------S--SYFIDAATVNDSGEYRCQ 72 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEEC--CCBTTBCCCEEEETTEEEESSC--------S--EEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeC--CCCCCCcceEEEECCEEccCCc--------e--EEEEeCCCcccCEEEEEE
Confidence 457889999988899999999999999 4666555 89999999886421 2 799999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 260 AVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
+.|..+ +..+.|.|.. ++.+... ....+.+|+.+.|.|.+
T Consensus 73 ~~n~~~--s~~~~l~V~~-------------------------------------~~~~~~~-~~~~~~~g~~~~l~C~~ 112 (175)
T 1fnl_A 73 TNLSTL--SDPVQLEVHI-------------------------------------GWLLLQA-PRWVFKEEDPIHLRCHS 112 (175)
T ss_dssp CSSSCC--CCCEEEEEEC-------------------------------------SSEEEEC-SCSEEETTCCEEEEEEE
T ss_pred eeCCcc--cccEEEEEeC-------------------------------------CCceeeC-CCceecCCCCEEEEEEc
Confidence 998554 4456677753 2222222 33567899999999998
Q ss_pred eecCCCc-cEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE-EEEEEEEEe
Q psy2145 340 IPVGDSK-LKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV-TSSTLFVES 409 (808)
Q Consensus 340 ~~~g~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~-~~~~l~V~~ 409 (808)
.+.+. +.+.|+|+|..+... ... ..|.|.++..+|+|.|+|.|.|..|... ..+.|.|.+
T Consensus 113 --~~~~~~~~~~W~k~g~~~~~~------~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 174 (175)
T 1fnl_A 113 --WKNTALHKVTYLQNGKDRKYF------HHN--SDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQ 174 (175)
T ss_dssp --CTTCCCEEEEEEETTEEEEEE------EEC--CCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred --CCCCCceEEEEEECCeEccCC------CCC--CEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeC
Confidence 56554 599999999987421 122 2699999999999999999999776543 347777764
No 179
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.86 E-value=3.5e-21 Score=185.98 Aligned_cols=180 Identities=13% Similarity=0.155 Sum_probs=127.9
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|...+.. .+.+|++|+|.|.+ .+ +.+.+.|+|+|..+...... .........|.|.+++.+|+|.|+|.|
T Consensus 3 ~~P~i~~~p~~--~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 76 (188)
T 1oll_A 3 PKPFIWAEPHF--MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIY 76 (188)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeecCC--cCCCCCCEEEEEec--CC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEe
Confidence 36777766554 58999999999997 44 45789999999876421000 001123347999999999999999999
Q ss_pred EeCCeeE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 582 TNALGEA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 582 ~N~~G~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|..|.. +..+.|.|.... .+|.+.... + ..+.+|+.++|.|.
T Consensus 77 ~~~~~~~~~s~~~~l~V~~~~---------------------------------~~p~i~~~p-~-~~v~~G~~v~L~C~ 121 (188)
T 1oll_A 77 RVGELWSEPSNLLDLVVTEMY---------------------------------DTPTLSVHP-G-PEVISGEKVTFYCR 121 (188)
T ss_dssp EETTEECCCCCCEEEEEESCS---------------------------------CCCEEEEES-C-SEEETTCEEEEEEE
T ss_pred cCCCCCCCCCCceEEEecccC---------------------------------CCCeEEECC-C-CccccCCEEEEEEE
Confidence 9987643 344666665321 246665443 2 45889999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCc---ceEEEEEEEEE
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAG---EAVSSTSLKVK 729 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G---~~~~s~~l~V~ 729 (808)
+ .+ +.+.|.|+|||..+.. ..........|.|.++..+|+|.|+|.|.|... ..+..+.|.|.
T Consensus 122 ~--~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 122 L--DT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp C--SS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred c--CC-CCCEEEEEECCccccc----cccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 8 44 4579999999987654 112234456899999999999999999999752 23345667665
No 180
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=4.9e-21 Score=186.34 Aligned_cols=175 Identities=9% Similarity=0.021 Sum_probs=118.3
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.. .+.+|++|+|.|.+ .+.|. .+.|+|+|..+....+. .........|.|.+++.+|+|.|+|.|
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~--~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a 77 (196)
T 2d3v_A 3 LSKATLWAEPGS-VISRGNSVTIRCQG--TLEAQ-EYRLVKEGSPEPWDTQN-PLEPKNKARFSIPSMTEHHAGRYRCYY 77 (196)
T ss_dssp CCBCEEEEESCS-EEETTCCEEEEEEC--CTTCC-EEEEEETTCSSCSEEEC-CCSSTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCC-cccCCCeEEEEEeC--CCCCc-EEEEEECCCCCCccccc-ccCCccccEEEeccCChhHCeEEEEEE
Confidence 357888888874 78899999999998 45555 99999999887542211 011233458999999999999999999
Q ss_pred EeCceeEE--EEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 261 VNALGQAV--TSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 261 ~n~~g~~~--~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
.|..|... ..+.|.|.... .+|.+...+ ...+.+|+.++|.|.
T Consensus 78 ~n~~g~~~~s~~~~l~V~~~~----------------------------------~~p~i~~~~-~~~v~~G~~v~L~C~ 122 (196)
T 2d3v_A 78 YSPAGWSEPSDPLELVVTGFY----------------------------------NKPTLSALP-SPVVTSGENVTLQCG 122 (196)
T ss_dssp EETTEECBCCCCEEEEEECSS----------------------------------CCCEEEC------------CEEEEE
T ss_pred eCCCCcCCcCccEEEEecCCC----------------------------------CCCeEEccC-CccccCCCcEEEEEE
Confidence 99887543 45677776421 245554443 356889999999999
Q ss_pred EeecCCCccEEEEEECCEeccCCCcE-EEEee-CcEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQASNRV-STMHD-FGYVALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~~~~-~~~~~-~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
+ .+.| +.+.|+|+|..+...... ..... .....|.|.++..+|+|.|+|.|.|..+.
T Consensus 123 ~--~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 123 S--RLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp E--SSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTEE
T ss_pred c--CCCC-CEEEEEccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCCC
Confidence 8 7888 899999999887532211 11111 22358999999999999999999998653
No 181
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.85 E-value=7.9e-21 Score=187.61 Aligned_cols=174 Identities=21% Similarity=0.332 Sum_probs=127.6
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|+++.|.|.+ .+.|.+.|.|+|++ ..+ ....++.....++...|.|.+++.+|+|.|+|.
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 89 (213)
T 3d9a_L 12 SVTPGNSVSLSCRA--SQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQ 89 (213)
T ss_dssp EECTTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEeCCCcEEEEEEC--CCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEe
Confidence 58999999999999 78988999999853 221 123577777777778999999999999999999
Q ss_pred EEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 581 ATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 581 a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
|.|..|.... .+.|.|.... .+|.+...... ..+.+|+.+.|.|.
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~---------------------------------~~p~v~~~~~~-~~~~~g~~~~l~C~ 135 (213)
T 3d9a_L 90 QSNSWPYTFGGGTKLEIKRAD---------------------------------AAPTVSIFPPS-SEQLTSGGASVVCF 135 (213)
T ss_dssp ECSSSSCEECCCEEEEECCCC---------------------------------BCCEEEEECCC-HHHHHTTEEEEEEE
T ss_pred eecCCcceeCCCEEEEEecCC---------------------------------CCceeEeECCC-hhhcCCCcEEEEEE
Confidence 9999875433 3466665321 13666554433 23457999999999
Q ss_pred EeeCC-CCCe-EEEEEECCEEccCCCcEE--EEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 660 VVPVG-DPTM-RFEWFVNGVELKMGSRFH--VQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 660 v~~~g-~P~p-~i~W~~~g~~l~~~~~~~--~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
+ .| .|.+ .|.|+|||.++..+.... ... .++ .+.|.|.++..+|+|.|+|.|.|..........+
T Consensus 136 ~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~i 209 (213)
T 3d9a_L 136 L--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSF 209 (213)
T ss_dssp E--EEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSCEEEEE
T ss_pred E--eeecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCceEEEe
Confidence 9 55 6665 999999999987651111 100 111 3489999999999999999999998775444333
No 182
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.85 E-value=3.8e-22 Score=192.22 Aligned_cols=162 Identities=14% Similarity=0.262 Sum_probs=112.7
Q ss_pred ccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECC-CCCCCCEEEEEEEEeCCeeEEEEEEE
Q psy2145 516 VEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSH-VRAEDEGIYICKATNALGEAVTTASM 594 (808)
Q Consensus 516 v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~a~N~~G~~~~s~~l 594 (808)
..+|+.+.|.|.+ .+ |. .|+|+|||..|..+. ++ +|.|.+ ++.+|+|.|+|.|.|..|.....+.+
T Consensus 11 ~~~G~~v~L~C~~--~~-~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~ 77 (186)
T 1jbj_A 11 SISGTSVELTCPL--DS-DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKA 77 (186)
T ss_dssp EEETTEEEEECSS--CC-CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEECC
T ss_pred EeCCcEEEEEEeC--CC-CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEEE
Confidence 4679999999998 55 43 399999999997642 12 699999 99999999999999999986666655
Q ss_pred EEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEe------ecCCCccccCCceEEEEEEEeeCCCCCe
Q psy2145 595 KIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQ------LLTGTSEIMEGQSAHYDCRVVPVGDPTM 668 (808)
Q Consensus 595 ~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~------~~~~~~~v~~G~~v~l~C~v~~~g~P~p 668 (808)
.|........... .+..+ ....+|.+.. .+.....+.+|+++.|.|.+ |.|
T Consensus 78 ~v~~~~~~~~~~~------~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~-----p~p 134 (186)
T 1jbj_A 78 RVGSADDAKKDAA------KKDDA------------KKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL-----TDK 134 (186)
T ss_dssp CCCSCCCCCCCCC------CCCCC------------SCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-----SCS
T ss_pred EEecccccccccc------ccccc------------ccCCccccccccccccccccceecCCCCeEEEEeeC-----CCC
Confidence 5543221100000 00000 0000010000 00001235699999999965 789
Q ss_pred EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcce
Q psy2145 669 RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEA 720 (808)
Q Consensus 669 ~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 720 (808)
.|.|+|||..|..... ....|.|.++..+|+|.|+|.|.|..|+.
T Consensus 135 ~i~W~k~g~~i~~~~~-------~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 135 TIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp CEEEEETTEECCCSSC-------CSSCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred eEEEEECCEECcccCC-------CcceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 9999999999975432 23379999999999999999999999987
No 183
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.85 E-value=3.6e-21 Score=187.62 Aligned_cols=184 Identities=13% Similarity=0.104 Sum_probs=126.2
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce-EEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF-TETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~-~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+.. .+.+|++|+|.|.+ .+.|. .+.|+|+|..+....+. ......+ .|.|.+++.+|+|.|+|.
T Consensus 3 ~~~P~i~~~p~~-~v~~G~~v~L~C~~--~~~~~-~~~W~k~g~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~ 76 (198)
T 1ugn_A 3 LPKPTLWAEPGS-VITQGSPVTLRCQG--GQETQ-EYRLYREKKTAPWITRIPQELVKKG--QFPIPSITWEHTGRYRCY 76 (198)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEEC--CTTCC-CEEEEESSSCCHHHHTSCHHHHTTT--EEEESSCCGGGCEEEEEE
T ss_pred CCCCeEeccCCC-cccCCCcEEEEEEe--cCCCc-EEEEEECCccccccccccccCCccc--EEEECCCCHHHCeEEEEE
Confidence 357888888864 78999999999998 45555 69999999887421111 0011122 799999999999999999
Q ss_pred EEeCc-e--eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEE
Q psy2145 260 AVNAL-G--QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFE 336 (808)
Q Consensus 260 a~n~~-g--~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~ 336 (808)
|.|.. | ..+..+.|.|...+ .+|.+...+ ...+.+|+.++|.
T Consensus 77 a~n~~~g~~~~s~~~~l~V~~~~----------------------------------~~p~i~~~~-~~~v~~G~~v~L~ 121 (198)
T 1ugn_A 77 YGSDTAGRSESSDPLELVVTGAY----------------------------------IKPTLSAQP-SPVVNSGGNVTLQ 121 (198)
T ss_dssp EEETTTEECCCCCCEEEEEECSS----------------------------------CCCEEEEES-CSEEETTCCEEEE
T ss_pred EECCCCCcccCCccEEEEEcccc----------------------------------cCCccccCC-ccccCCCCcEEEE
Confidence 99987 6 33456778776421 234444332 3578899999999
Q ss_pred EEEeecCCCccEEEEEECCEeccCCCcE-EEEe-eCcEEEEEEccCCCCCCeEEEEEEEcCCcce-----EEEEEEEEE
Q psy2145 337 ARLIPVGDSKLKVTWLRNGVPIQASNRV-STMH-DFGYVALNFKYTYPEDSGTYTCRAVNELGEA-----VTSSTLFVE 408 (808)
Q Consensus 337 C~~~~~g~p~~~v~W~~~g~~l~~~~~~-~~~~-~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~-----~~~~~l~V~ 408 (808)
|.+ .+. .+.+.|+|+|..+...... .... .+....|.|.++..+|+|.|+|.|.|..+.. +..+.|.|.
T Consensus 122 C~~--~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 122 CDS--QVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEC--SSC-CSEEEEEEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred Eec--CCC-CcEEEEEECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 998 666 7899999999887543221 1111 2234589999999999999999999987632 223556554
No 184
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.85 E-value=4.8e-21 Score=194.28 Aligned_cols=183 Identities=17% Similarity=0.263 Sum_probs=128.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEee-CCCCCceEEEEeCCEEee------------------------------ccCcEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEP-VTDSNLKVEWFKNGRPVT------------------------------IGHRFRP 101 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~-~~~p~~~v~W~~~g~~l~------------------------------~~~r~~~ 101 (808)
...+..+ .+.+|++++|.|.+.+ .+.|.+.|.|+|++..+. ...|+.+
T Consensus 6 ~~~~~~v-~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 6 RTTHTEV-EVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp ECSCSEE-EECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred EcCCCce-EEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 3344466 8999999999999984 126778999999875421 1223332
Q ss_pred EeeCCeEEEEEcccCcCCCeeEEEEEEecCcce-----EEEEEEEEecCCCccccccccccceeeeeecccccccccccc
Q psy2145 102 IHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFA-----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYI 176 (808)
Q Consensus 102 ~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (808)
.. .+..+|.|.+++.+|+|.|+|.|.|..+.. ...+.|.|...+
T Consensus 85 ~~-~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------------------------------ 133 (250)
T 2fbo_J 85 AN-LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT------------------------------ 133 (250)
T ss_dssp SC-TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS------------------------------
T ss_pred cc-CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC------------------------------
Confidence 22 133479999999999999999999977643 457777775421
Q ss_pred ccccCCCCeEEe-ecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceE----------------------
Q psy2145 177 EETTTQAPIFTT-SLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFT---------------------- 233 (808)
Q Consensus 177 ~~~~~~~P~~~~-~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~---------------------- 233 (808)
.+|.+.. .+..+.+.+|++++|.|.+ .+.|.+.|.|+|++..+.......
T Consensus 134 -----~~~~~~~~~~~~~~v~~g~~v~L~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (250)
T 2fbo_J 134 -----PSNNVHVSTAEVVQVDEGNDITMTCPC--TDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGR 206 (250)
T ss_dssp -----CCSCCEECCCSEEECCTTCCEEECCCE--ESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTS
T ss_pred -----CCCeEEEecCceEEecCCCcEEEEEEe--cCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecc
Confidence 1333333 3446778899999999999 577888999999998886532110
Q ss_pred EEecCceEEEEEccCCCCCcEEEEEEEEe---CceeEEEEEEEEE
Q psy2145 234 ETNNFGFVALDIMQCLPEDSGVYTCRAVN---ALGQAVTSGNLLV 275 (808)
Q Consensus 234 ~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---~~g~~~~~~~l~V 275 (808)
.... +..+|.|.+++.+|+|.|+|.|.| ..|....++.|.|
T Consensus 207 ~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 207 ASFS-GARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp EEEE-TTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred cccC-CccEEEEecCCcccCEEEEEEecCCccccCccceeEEEeC
Confidence 0000 112899999999999999999999 4455555555543
No 185
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=4.7e-21 Score=182.91 Aligned_cols=167 Identities=19% Similarity=0.213 Sum_probs=124.4
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCC-ceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSN-LKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~-~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
+.+...|..+ .+.+|++++|.|.+.+ .|. ..+.|||+|..+..+ ..+|.|.+++.+|+|.|+|.+.
T Consensus 5 P~i~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~ 71 (176)
T 1f2q_A 5 PKVSLNPPWN-RIFKGENVTLTCNGNN--FFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQ 71 (176)
T ss_dssp CCCEEESSCS-EEETTCCEEEECCTTC--C----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECT
T ss_pred CEEEcCCCCc-ceecCCcEEEEEeCCC--CCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcC
Confidence 3344567776 8999999999999984 454 469999999987642 2279999999999999999998
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..+. ..+.|.|.. ++.+. .+....+.+|+.++|.|.+.
T Consensus 72 ~~~~s--~~~~l~V~~--------------------------------------~~~~~-~~~~~~~~~g~~~~l~C~~~ 110 (176)
T 1f2q_A 72 QVNES--EPVYLEVFS--------------------------------------DWLLL-QASAEVVMEGQPLFLRCHGW 110 (176)
T ss_dssp TSSCC--CCEEEEEEC--------------------------------------SSEEE-EESCSEEETTSCEEEEEEEG
T ss_pred Ccccc--ccEEEEEeC--------------------------------------cceee-cCCcceeeCCCCEEEEEEec
Confidence 86554 345565541 22222 33345688999999999994
Q ss_pred ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCcee-EEEEEEEEEeeCC
Q psy2145 209 PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQ-AVTSGNLLVHSKK 279 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~ 279 (808)
.+.|.+.+.|+|+|..+..... + ..|.|.++..+|+|.|+|.|.|..|. .+..+.|.|..+|
T Consensus 111 -~~~p~~~~~W~~~g~~~~~~~~------~--~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p 173 (176)
T 1f2q_A 111 -RNWDVYKVIYYKDGEALKYWYE------N--HNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAP 173 (176)
T ss_dssp -GGCCEEEEEEEETTEECCSCCC------S--SEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSC
T ss_pred -CCCCceEEEEEECCEEEeeecC------C--CeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCC
Confidence 2567789999999998853221 1 27999999999999999999996554 4456888887644
No 186
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.85 E-value=2.6e-21 Score=184.36 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=119.6
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee----------ccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEec
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT----------IGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNL 130 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~----------~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 130 (808)
.+.+|++++|.|...+...|.+.|.|+|++..|. .+.|+.+..+ + +|.|.+++.+|+|.|+|.|.|.
T Consensus 7 ~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~-g--sL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 7 WGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN-G--DLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT-S--CEEESSCCGGGCEEEEEEEEET
T ss_pred EEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC-C--cEEEcccccccCEEEEEEEEeC
Confidence 6789999999995432235677999999997663 3456666433 3 4999999999999999999999
Q ss_pred Ccce--EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 131 VGFA--EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 131 ~g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
.|.. ...+.|.|... ...|.+.. .+..++|.|.+
T Consensus 84 ~g~~~~~~~~~l~V~~~-----------------------------------~~~p~i~~--------~~~~v~L~C~~- 119 (176)
T 1hng_A 84 NGTRILNKALDLRILEM-----------------------------------VSKPMIYW--------ECSNATLTCEV- 119 (176)
T ss_dssp TCCEEEEEEEEEEEECC-----------------------------------CCCCEEEE--------ETTTTEEEEEC-
T ss_pred CCCEEEEEEEEEEEeCC-----------------------------------CCCCEEEe--------cCCcEEEEEEe-
Confidence 9986 55667777532 12344432 24569999999
Q ss_pred ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 209 PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
.+.|.+.|.|+|||.++..+.+ +.|.++..+|+|.|+|.|.|..|...+.+.|.|
T Consensus 120 -~g~p~p~i~W~~~g~~l~~~~~-----------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 120 -LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp -SSCSSCEEEEEETTEEEEEESS-----------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred -cCCCCcEEEEEECCEECCCCCc-----------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 6888899999999999875543 334477799999999999999999888877654
No 187
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.85 E-value=1.3e-20 Score=186.11 Aligned_cols=167 Identities=16% Similarity=0.279 Sum_probs=126.8
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCC
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHV 569 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v 569 (808)
|.+..++..+ .+.+|+++.|.|.+ .+.|.+.|.|+|++ ..+ ....++.....++..+|.|.++
T Consensus 2 ~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 78 (213)
T 3nl4_L 2 VVMTQTPASV-SEPVGGTVTIKCQA--SQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDL 78 (213)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSC
T ss_pred ccEEeCCCeE-EEcCCCCEEEEEEe--cCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCC
Confidence 3445544444 68999999999999 78899999999942 211 1146777777777889999999
Q ss_pred CCCCCEEEEEEEEeCCe---eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 570 RAEDEGIYICKATNALG---EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G---~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+.+|+|.|+|.|.|..| .......|.|...+ .+|.+...... .
T Consensus 79 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~p~v~~~~~~-~ 124 (213)
T 3nl4_L 79 ECADAATYYCQSTYENPTYVSFGGGTEVGVKGDP---------------------------------VAPTVLIFPPS-A 124 (213)
T ss_dssp CGGGCEEEEEEECCSSTTTCEECCCEEEEEECCC---------------------------------BCCEEEEECCC-H
T ss_pred ChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCC---------------------------------cCCeEEEeCCc-h
Confidence 99999999999999877 34444566665421 24666554433 3
Q ss_pred cccCCceEEEEEEEeeCC-CCCeEEEEEECCEEccCCC------------cEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 647 EIMEGQSAHYDCRVVPVG-DPTMRFEWFVNGVELKMGS------------RFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g-~P~p~i~W~~~g~~l~~~~------------~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.+.+|+.++|.|.+ .| .|.|.|.|+|||..+..+. .+.+ .+.|.|..+..+|+|.|+|.|
T Consensus 125 ~~~~g~~v~l~C~~--~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~Y~C~a 197 (213)
T 3nl4_L 125 DLVATGTVTIVCVA--NKYFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNL-----SSTLTLTSTEYNSHKEYTCKV 197 (213)
T ss_dssp HHHTTSEEEEEEEE--EEEBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEE-----EEEEEEEHHHHHTCCEEEEEE
T ss_pred hhccCCcEeEEEEE--ecccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEE-----EEEEEecHHHcCCCCeEEEEE
Confidence 56789999999999 56 8999999999999987432 2222 247999999999999999999
Q ss_pred E
Q psy2145 714 I 714 (808)
Q Consensus 714 ~ 714 (808)
.
T Consensus 198 ~ 198 (213)
T 3nl4_L 198 T 198 (213)
T ss_dssp E
T ss_pred E
Confidence 9
No 188
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.85 E-value=3.4e-21 Score=190.51 Aligned_cols=175 Identities=14% Similarity=0.186 Sum_probs=124.4
Q ss_pred cccCCCceEEEEEEeeCCCCCc---EEEEEECCEecCCCC------------------CeEEEe---eCcEEEEEECCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL---KVEWFRNEKPLEDSS------------------RITTKH---DFGYVAMDLSHVR 570 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~---~v~W~k~g~~l~~~~------------------~~~~~~---~~~~~~L~I~~v~ 570 (808)
++.+|+++.|.|.+ .+.|.+ .|+|+|++..+.... ++.... ..+..+|.|.+++
T Consensus 10 tv~~G~~v~L~C~v--~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~ 87 (218)
T 4frw_A 10 TVVLGQDAKLPCFY--RGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV 87 (218)
T ss_dssp EEETTSCEEECCEE--CCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCC
T ss_pred EEEcCCCEEEEEEE--EcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeecc
Confidence 68899999999999 677765 489999886554211 111111 1123469999999
Q ss_pred CCCCEEEEEEEEeCCeeEEEE-EEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 571 AEDEGIYICKATNALGEAVTT-ASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G~~~~s-~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
.+|+|.|.|.+.|..+..... ..+.+... |...........+.
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~ 131 (218)
T 4frw_A 88 QADEGEYECRVSTFPAGSFQARLRLRVLVP------------------------------------PLPSLNPGPALEEG 131 (218)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEEBC------------------------------------CCCEEEECSCEETT
T ss_pred HHHCCceeEEEEeccCceeeeEEEEEEeee------------------------------------ccceeeeeeeeeee
Confidence 999999999999876654444 33333322 11112222234678
Q ss_pred CCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-eCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2145 650 EGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQH-DFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKV 728 (808)
Q Consensus 650 ~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V 728 (808)
+|+.+.|.|.+ .|.|+|.|.|+++|..+..+..+.... ....+.|.|.++..+|+|.|+|.|+|.+|..+..++|.|
T Consensus 132 ~~~~~~~~c~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 132 QGLTLAASCTA--EGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp CCSEEEEEEEE--EEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred eccccceeeec--cCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 89999999999 799999999999998876544332210 011357999999999999999999999998887777665
Q ss_pred E
Q psy2145 729 K 729 (808)
Q Consensus 729 ~ 729 (808)
.
T Consensus 210 ~ 210 (218)
T 4frw_A 210 H 210 (218)
T ss_dssp C
T ss_pred E
Confidence 4
No 189
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.85 E-value=1.2e-20 Score=187.60 Aligned_cols=179 Identities=17% Similarity=0.244 Sum_probs=127.9
Q ss_pred cccCCCceEEEEEEeeCCCCC-----cEEEEEECCEec---------CC------CCCeEEEee---CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPT-----LKVEWFRNEKPL---------ED------SSRITTKHD---FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~-----~~v~W~k~g~~l---------~~------~~~~~~~~~---~~~~~L~I~~v~~ 571 (808)
.+.+|+.+.|.|.+ .+.|. +.|.|+|++..+ .. ..+..+..+ .+..+|.|.+++.
T Consensus 12 ~~~~G~~v~L~C~~--~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~ 89 (222)
T 3sbw_C 12 VVEYGSNMTIECKF--PVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKL 89 (222)
T ss_dssp EEETTSCEEEEEEC--CCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCG
T ss_pred EEEcCCcEEEEeEe--cCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCccc
Confidence 57899999999998 66663 489999975322 11 134443322 2456899999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.| .|.....+.|.|...+. .|..... ..+.+|
T Consensus 90 ~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~---------------------------------~~~~~~~----~~~~~g 131 (222)
T 3sbw_C 90 QDAGVYRCMISY-GGADYKRITVKVNAPYN---------------------------------KINQRIL----VVDPVT 131 (222)
T ss_dssp GGCEEEEEEEES-SSEEEEEEEEEEEBCCC---------------------------------CCEEEEE----EEETTT
T ss_pred ccCeEEEEEEEe-CCCceeEEEEEEECCCC---------------------------------CCCceee----eeecCC
Confidence 999999999999 67777888888885432 1222211 146789
Q ss_pred ceEEEEEEEeeCCCCCeEEEEEEC-CEEccCCCcEEE--EEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2145 652 QSAHYDCRVVPVGDPTMRFEWFVN-GVELKMGSRFHV--QHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKV 728 (808)
Q Consensus 652 ~~v~l~C~v~~~g~P~p~i~W~~~-g~~l~~~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V 728 (808)
+.+.|.|.+ .|.|.|.|.|+++ |..+....+... ..++....+.+..+..+|+|.|+|.|.|.+|....++.|.|
T Consensus 132 ~~v~L~C~~--~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v 209 (222)
T 3sbw_C 132 SEHELTCQA--EGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVI 209 (222)
T ss_dssp TEEEEEEEE--EEBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred CcEEEEEEe--cCCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEe
Confidence 999999999 7899999999999 777665433322 22233344444456679999999999999999999999999
Q ss_pred EeCCCcc
Q psy2145 729 KSKSDIV 735 (808)
Q Consensus 729 ~~~p~~~ 735 (808)
..+|...
T Consensus 210 ~~~p~~~ 216 (222)
T 3sbw_C 210 PELPLAH 216 (222)
T ss_dssp CCC----
T ss_pred cCCcccC
Confidence 8776543
No 190
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.85 E-value=5.1e-21 Score=184.11 Aligned_cols=156 Identities=14% Similarity=0.132 Sum_probs=116.9
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecC
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLV 131 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 131 (808)
+...|. . .+.+|++++|.|.+. + +.+.+.|+|+|... ..+. ..|.|.+++.+|+|.|+|.|.|..
T Consensus 11 i~~~p~-~-~v~~G~~v~L~C~~~--~-~~~~~~W~k~g~~~--------~~~~--~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 11 LQALPS-S-LVPLEKPVTLRCQGP--P-GVDLYRLEKLSSSR--------YQDQ--AVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp EEEESC-S-EEETTCCEEEEEECS--T-TCSEEEEEETTTCC--------EESS--SEEEESSCCGGGCEEEEEEEEETT
T ss_pred EEeCCC-c-cccCCCcEEEEEeCC--C-CCCEEEEEECCccc--------cCcc--cEEEECcCChhhCceEEEEEEcCC
Confidence 334444 4 789999999999987 3 66799999998751 1122 279999999999999999999987
Q ss_pred cce--EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEee
Q psy2145 132 GFA--EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIP 209 (808)
Q Consensus 132 g~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~ 209 (808)
|.. +..+.|.|... ..+|.+...+ +..+.+|++++|.|.+
T Consensus 76 g~~~~s~~~~l~V~~~-----------------------------------~~~p~i~~~p-~~~v~~G~~v~l~C~~-- 117 (184)
T 2gi7_A 76 LWSLPSDQLELVATGV-----------------------------------FAKPSLSAQP-GPAVSSGGDVTLQCQT-- 117 (184)
T ss_dssp EEBCCCCCEEEEEESS-----------------------------------SCCCEEEEEC-CCSSCCTTCEEEEEEC--
T ss_pred CccCCCCCEEEEecCc-----------------------------------CCCCEEEeCC-CceecCCCcEEEEEEc--
Confidence 632 34466666421 2357777666 5678899999999997
Q ss_pred cCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 210 VSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 210 ~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
.+. .+.+.|+|+|..+........ ....|.|.+++.+|+|.|+|.|.|..+
T Consensus 118 ~~~-~~~~~w~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 118 RYG-FDQFALYKEGDPAPYKNPERW----YRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp SSC-CCEEEEEECCCCTTSCCCCEE----EEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CCC-CcEEEEEECCCcCcceecCCC----ceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 344 469999999998865332211 122689999999999999999999754
No 191
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.85 E-value=6.6e-21 Score=183.40 Aligned_cols=159 Identities=17% Similarity=0.221 Sum_probs=123.7
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec--------------cCcEEEEe---eCCeEEEEEcccCcCCCeeE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI--------------GHRFRPIH---DFGYVALDIIDTIPEDSGTY 123 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~--------------~~r~~~~~---~~~~~~L~I~~~~~~D~G~Y 123 (808)
.+.+|++++|.|.+. +.|.+.+.|+|++..+.. ..|+.... ..+..+|.|.+++.+|+|.|
T Consensus 6 ~~~~G~~v~L~C~~~--~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 6 LGKKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEETTSCEEECCBCS--SSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred EEeCCCCEEEEEEEc--CCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 788999999999998 578889999999863221 23444332 33455799999999999999
Q ss_pred EEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEE
Q psy2145 124 TCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHF 203 (808)
Q Consensus 124 ~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L 203 (808)
+|.+.|..| .+.|.|.. + ..+....+.+|++++|
T Consensus 84 ~C~~~~~~~----~~~l~V~~-----------------------------------------~-~~~~~~~v~~g~~~~l 117 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFG-----------------------------------------L-TANSDTHLLQGQSLTL 117 (184)
T ss_dssp EEEETTEEE----EEEEEEEE-----------------------------------------E-EESSCSEEETTCCEEE
T ss_pred EEEEEcCCC----cEEEEEEE-----------------------------------------e-cCCCCceeecCCCEEE
Confidence 999987644 45565541 1 1233456789999999
Q ss_pred EEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEeeCC
Q psy2145 204 ECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHSKK 279 (808)
Q Consensus 204 ~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 279 (808)
.|.+ .+.|.+.+.|+++|..+.. ..+ .|.|.++..+|+|.|+|.|.|..|....++.|.|...|
T Consensus 118 ~C~~--~~~p~~~v~W~~~~~~~~~--------~~~--~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 118 TLES--PPGSSPSVQCRSPRGKNIQ--------GGK--TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp EEEC--CTTCCCEEEEECTTSCEEE--------ESS--EEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred EEEc--CCCCCCEEEEEeCCCcccc--------Cce--EEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEEecC
Confidence 9999 5779999999998765521 112 79999999999999999999999999999999998643
No 192
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.84 E-value=1.5e-20 Score=186.27 Aligned_cols=173 Identities=19% Similarity=0.359 Sum_probs=122.7
Q ss_pred cccCCCceEEEEEEeeCCC-CCcEEEEEECC--Ee-------------c-C--CCCCeEEEeeCcEEEEEECCCCCCCCE
Q psy2145 515 AVEEGKNAHFSCRLIPVGD-PTLKVEWFRNE--KP-------------L-E--DSSRITTKHDFGYVAMDLSHVRAEDEG 575 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~-P~~~v~W~k~g--~~-------------l-~--~~~~~~~~~~~~~~~L~I~~v~~~D~G 575 (808)
.+.+|+++.|.|.+ .+. |.+.|.|+|.. .. . . ...|+.+....+..+|.|.+++.+|+|
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (218)
T 3s96_B 11 SFSLGASAKLTCTL--NSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEA 88 (218)
T ss_dssp EEETTSCEEEEEEE--CGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EECCCCcEEEEEEC--CCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCE
Confidence 68999999999999 777 89999999931 10 0 0 124677666677788999999999999
Q ss_pred EEEEEEEeCCe-----eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 576 IYICKATNALG-----EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 576 ~Y~C~a~N~~G-----~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
.|.|.|.|..| .....+.|.|...+. .+|.+...... ..+..
T Consensus 89 ~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~~~~~~~~-~~~~~ 135 (218)
T 3s96_B 89 IYICGVGDTIKEQFVYVFGGGTKVTVLGQPK--------------------------------STPTLTVFPPS-SEELK 135 (218)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCC--------------------------------BCCEEEEECCC-HHHHH
T ss_pred EEEEEEecCCCCceeEEEcCcEEEEEecCCC--------------------------------CCceEEeeCCC-ccccc
Confidence 99999999876 333346777764321 23666554433 34567
Q ss_pred CceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcE--EEEEeCCE---EEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 651 GQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRF--HVQHDFGY---VTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 651 G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~--~~~~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
|+.++|.|.+ .| .|.+ .|.|+|||.+|..+... ....++.+ +.|.|.....+|+|.|+|.|.|..|....+
T Consensus 136 ~~~v~L~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 136 ENKATLVCLI--SNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp TTEEEEEEEE--EEEBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEE--CcccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 8999999999 56 5777 99999999999763221 11112222 348888888889999999999999877655
Q ss_pred E
Q psy2145 724 T 724 (808)
Q Consensus 724 ~ 724 (808)
+
T Consensus 214 ~ 214 (218)
T 3s96_B 214 L 214 (218)
T ss_dssp E
T ss_pred c
Confidence 4
No 193
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.84 E-value=4.8e-20 Score=187.43 Aligned_cols=184 Identities=18% Similarity=0.260 Sum_probs=134.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee-----------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT-----------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+.+.+.+.|.|||+ +..+. ...|+.+..+ .+..+|.
T Consensus 4 l~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (256)
T 1nqb_A 4 LQQSGAE-LVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQ 82 (256)
T ss_dssp EEECCCE-EECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EECCCCe-eecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEE
Confidence 4567777 89999999999999842113679999994 32221 1357777654 4667999
Q ss_pred EcccCcCCCeeEEEEEEecCcc-----eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGF-----AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~-----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
|.+++.+|+|.|+|.|.|..|. ....+.|.|. .+|.+
T Consensus 83 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~--------------------------------------~~~~v 124 (256)
T 1nqb_A 83 LSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVS--------------------------------------SDIEL 124 (256)
T ss_dssp ECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEEC--------------------------------------CCCCE
T ss_pred ECcCChhhCEEEEEEEeeccCccceeEEcCceeeeec--------------------------------------ccccE
Confidence 9999999999999999998663 1123455553 34566
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCe-----EEEEee--CCEEcc------------CCCceEEEecCceEEEEEcc
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTM-----KVEWFH--NNVPIK------------SGSRFTETNNFGFVALDIMQ 247 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-----~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~ 247 (808)
...+..+.+.+|++++|.|.+ .+.|.+ .|.|+| +|..+. ...++.........+|.|.+
T Consensus 125 ~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 202 (256)
T 1nqb_A 125 TQTPLSLPVSLGDQASISCRS--SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 202 (256)
T ss_dssp EEECSEEEECTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EecCcEEEEecCCcEEEEeEe--cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECC
Confidence 677778889999999999999 466654 999999 665441 13466655555666899999
Q ss_pred CCCCCcEEEEEEEEeCceeE-EEEEEEEEee
Q psy2145 248 CLPEDSGVYTCRAVNALGQA-VTSGNLLVHS 277 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~ 277 (808)
++.+|+|.|+|.|.|..+.. ...+.|.|..
T Consensus 203 v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 203 VEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 99999999999999854322 2245677764
No 194
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=8.4e-21 Score=193.36 Aligned_cols=192 Identities=20% Similarity=0.283 Sum_probs=131.7
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEecC----------------CCCCeEEEee--CcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPLE----------------DSSRITTKHD--FGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~~~ 572 (808)
.+.+|++|+|.|.+ .|.| .+.|.|+|+ |..+. ...|+.+..+ .+..+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~--~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (257)
T 1f3r_B 11 LVRPSETLSLTCTV--SGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTD 88 (257)
T ss_dssp EECTTSEEEEEEEE--ESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTT
T ss_pred cccCCceEEEEEEE--ecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCcc
Confidence 58999999999999 6764 788999986 32111 1357776654 45678999999999
Q ss_pred CCEEEEEEEEeCCe-------eE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecC
Q psy2145 573 DEGIYICKATNALG-------EA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLT 643 (808)
Q Consensus 573 D~G~Y~C~a~N~~G-------~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~ 643 (808)
|+|.|+|.|.|..| .. ...+.|.|...+... + ....+ ....+|.+...+
T Consensus 89 DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~-----~------------~~~~~----~~~~~~~~~~~p- 146 (257)
T 1f3r_B 89 DTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGS-----G------------GGGSG----GGGSDIKLTQSP- 146 (257)
T ss_dssp CCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSS-----C------------CSSSC----CCCCEECSCEET-
T ss_pred cCEEEEEEEcccccCccccccccccCCceEEEEEeCCccc-----c------------ccccC----CCccceEEEccC-
Confidence 99999999999865 11 123567776532100 0 00000 000012222222
Q ss_pred CCccccCCceEEEEEEEeeCCCCCeEEEEEE--CCEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCcEEE
Q psy2145 644 GTSEIMEGQSAHYDCRVVPVGDPTMRFEWFV--NGVELK------------MGSRFHVQHDFGYVTLDITKCVPADSGVY 709 (808)
Q Consensus 644 ~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 709 (808)
....+.+|++++|.|.+ .|.|.+.|.||| +|..+. ...++.+..++...+|.|.++..+|+|.|
T Consensus 147 ~~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 224 (257)
T 1f3r_B 147 SLLSASVGDRVTLSCKG--SQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATY 224 (257)
T ss_dssp SEECCCTTCCEEEEEEC--SSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEE
T ss_pred CEEEEcCCCCEEEEEEE--CCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEE
Confidence 23468899999999999 799989999999 676441 14678777667778999999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEEeCC
Q psy2145 710 MCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 710 ~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
+|.|.|....-...+.|.|+..+
T Consensus 225 ~C~a~n~~~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 225 FCYQYNNGYTFGAGTKLELKAAE 247 (257)
T ss_dssp EEEEESSSEEECCCCEECCSSSC
T ss_pred EEEEeCCCCeECCCEEEEEeCCC
Confidence 99999986222234567776544
No 195
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.84 E-value=1e-20 Score=186.96 Aligned_cols=180 Identities=11% Similarity=0.060 Sum_probs=127.0
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeE--EEEEcccCcCCCeeEEEEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYV--ALDIIDTIPEDSGTYTCRA 127 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~--~L~I~~~~~~D~G~Y~C~a 127 (808)
+.+...|. . .+.+|++|+|.|.+.+ +.+.|.|+|+|..+....+.. ....... +|.|.+++.+|+|.|+|.|
T Consensus 10 P~i~~~p~-~-~v~~G~~vtL~C~~~~---~~~~~~W~k~g~~~~~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 10 PFISAKSS-P-VIPLDGSVKIQCQAIR---EAYLTQLMIIKNSTYREIGRR-LKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp CCEEESSC-S-EEETTCCEEEEECCCT---TCSEEEEEEEETTEEEECSEE-CC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CEEEecCC-C-ccCCCCCEEEEEEcCC---CCCEEEEEECCCccccccccc-CCCCcceeeEEEEcccccccCEEEEEEE
Confidence 33444555 4 7899999999999873 567999999998775433211 1112223 7999999999999999999
Q ss_pred EecCcceE--EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEE
Q psy2145 128 VNLVGFAE--VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFEC 205 (808)
Q Consensus 128 ~n~~g~~~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C 205 (808)
.|..|... ..+.|.|... ..+|.|...+ +..+.+|++|+|.|
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~-----------------------------------~~~P~i~~~p-~~~v~~G~~v~L~C 127 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGL-----------------------------------YGKPFLSADR-GLVLMPGENISLTC 127 (218)
T ss_dssp EETTTEEEECCCEEEEEECS-----------------------------------SCCCEEEESS-CSEECTTCCCEEEE
T ss_pred EcCCCceeecCCEEEEEcCc-----------------------------------ccCCEEEeCC-CCccCCCCCEEEEE
Confidence 99876433 3355666421 2356666555 55789999999999
Q ss_pred EEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCce-----eEEEEEEEEEee
Q psy2145 206 RLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALG-----QAVTSGNLLVHS 277 (808)
Q Consensus 206 ~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g-----~~~~~~~l~V~~ 277 (808)
.+ .+.|.+.+.|+|+|..+... .. .......|.|.+++.+|+|.|+|.|.|..+ ..+..+.|.|..
T Consensus 128 ~~--~~~~~~~~~W~k~g~~~~~~--~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 128 SS--AHIPFDRFSLAKEGELSLPQ--HQ--SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp EC--SSSCCSEEEEEETTCSSCCS--EE--ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred eC--CCCCCCEEEEEECCCccccc--cc--CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 76 46677899999999887642 11 112233899999999999999999998532 233457777765
No 196
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.84 E-value=3.3e-20 Score=182.69 Aligned_cols=171 Identities=18% Similarity=0.314 Sum_probs=124.6
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|++++|.|.+ .+.|.+.|.|+|+ |..+ ....++.....++...|.|.+++.+|+|.|+|.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (210)
T 1lk3_L 11 TVSPGEKLTISCKA--SESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQ 88 (210)
T ss_dssp EECTTSCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEcCCCCEEEEeeC--CCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEE
Confidence 68999999999999 7888889999984 3322 123577777667777999999999999999999
Q ss_pred EEeCCeeEEE-EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 581 ATNALGEAVT-TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 581 a~N~~G~~~~-s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
|.|..|.... ...|.|.... .+|.+...... ..+.+|+.++|.|.
T Consensus 89 ~~~~~~~~~~~~~~l~V~~~~---------------------------------~~P~v~~~~~~-~~~~~g~~v~l~C~ 134 (210)
T 1lk3_L 89 QSWNGPLTFGAGTKLELKRAD---------------------------------AAPTVSIFPPS-TEQLATGGASVVCL 134 (210)
T ss_dssp ECSSSSCEECCCEEEEECCCC---------------------------------BCCEEEEECCC-HHHHTTTEEEEEEE
T ss_pred EEcCCCceeCCCEEEEEcCCC---------------------------------cCCeEEEECCc-hhhccCCcEEEEEE
Confidence 9998775432 2456665321 13666554443 23458999999999
Q ss_pred EeeCC-CCCe-EEEEEECCEEccCCCcE--EEEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 660 VVPVG-DPTM-RFEWFVNGVELKMGSRF--HVQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 660 v~~~g-~P~p-~i~W~~~g~~l~~~~~~--~~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
+ .| .|.+ .|.|+|||+.+..+... .... .++ .+.|.|.++..+|+|.|+|.|.|.......+
T Consensus 135 ~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~ 205 (210)
T 1lk3_L 135 M--NNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSSSPVV 205 (210)
T ss_dssp E--EEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSSCEE
T ss_pred E--EeEeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCCCeee
Confidence 9 55 4554 99999999998765111 1111 111 2489999999999999999999998754433
No 197
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.84 E-value=7.8e-21 Score=187.64 Aligned_cols=177 Identities=17% Similarity=0.236 Sum_probs=129.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EEe----------e--ccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RPV----------T--IGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~l----------~--~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
...|..+ .+.+|++++|.|.+. +.|.+.|.|||++ ..+ . ...|+....+++..+|.|.+++.+
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3d9a_L 5 TQSPATL-SVTPGNSVSLSCRAS--QSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (213)
T ss_dssp EEECSEE-EECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeCCccE-EEeCCCcEEEEEECC--CCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChh
Confidence 3447777 899999999999998 4677789999843 221 1 125787777778889999999999
Q ss_pred CCeeEEEEEEecCcceEE-EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 119 DSGTYTCRAVNLVGFAEV-QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|+|.|+|.|.|..+.... .+.|.|... ..+|.+...+....+.+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~v~~~~~~~~~~~ 126 (213)
T 3d9a_L 82 DFGMYFCQQSNSWPYTFGGGTKLEIKRA-----------------------------------DAAPTVSIFPPSSEQLT 126 (213)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECCC-----------------------------------CBCCEEEEECCCHHHHH
T ss_pred hCEEEEEeeecCCcceeCCCEEEEEecC-----------------------------------CCCceeEeECCChhhcC
Confidence 999999999998775432 346666421 34677777655555558
Q ss_pred CCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceE--EE-ecCc----eEEEEEccCCCCCcEEEEEEEEeCceeEE
Q psy2145 198 GQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFT--ET-NNFG----FVALDIMQCLPEDSGVYTCRAVNALGQAV 268 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~--~~-~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 268 (808)
|+.++|.|.+.+ ..|.+ .|.|+|||..+..+.... .. ..++ ..+|.|.++..+|+|.|+|.|.|......
T Consensus 127 g~~~~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 127 SGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp TTEEEEEEEEEE-EBSSCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred CCcEEEEEEEee-ecCCceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 999999999953 24554 899999999987651111 11 1122 23899999999999999999999766543
No 198
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.84 E-value=4.2e-20 Score=184.23 Aligned_cols=180 Identities=17% Similarity=0.219 Sum_probs=122.2
Q ss_pred ecCceeecCCCeEEEEEEEeecCCC-CeEEEEeeCCEE-----------ccC------CCceEEEe---cCceEEEEEcc
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFHNNVP-----------IKS------GSRFTETN---NFGFVALDIMQ 247 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~~g~~-----------l~~------~~~~~~~~---~~~~~~L~I~~ 247 (808)
+..++.+.+|++|+|.|.+.+...+ ...|.|+|++.. +.. ..+..... ..+..+|.|.+
T Consensus 10 P~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 89 (226)
T 4f80_A 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHN 89 (226)
T ss_dssp CSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESS
T ss_pred CCCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEee
Confidence 3456889999999999999532222 347999987632 111 11222222 23567899999
Q ss_pred CCCCCcEEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEe
Q psy2145 248 CLPEDSGVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHV 327 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 327 (808)
++.+|+|.|+|.|.|..|.....+.+.+.. .+........+
T Consensus 90 v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~---------------------------------------~~~~~~~~~~~ 130 (226)
T 4f80_A 90 VTASDSGKYLCYFQDGDFYEKALVELKVAA---------------------------------------LGSDLHVDVKG 130 (226)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEB---------------------------------------CCCCCEEEEEE
T ss_pred CchHHCeeEEEEEECCCcEEEEEEEEeecc---------------------------------------ceecccceeee
Confidence 999999999999999988877665555432 11222234567
Q ss_pred ecCCeEEEEEEEeecC-CCccEEEEEECC-EeccCCCcEEEEee-CcEEEEEEccCCCCCCeEEEEEEEcCCcceEEEEE
Q psy2145 328 AENQAAHFEARLIPVG-DSKLKVTWLRNG-VPIQASNRVSTMHD-FGYVALNFKYTYPEDSGTYTCRAVNELGEAVTSST 404 (808)
Q Consensus 328 ~~G~~~~l~C~~~~~g-~p~~~v~W~~~g-~~l~~~~~~~~~~~-~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 404 (808)
.+|+.+.|.|.+ .| .|.+.|+|++++ ..+........... +.+..+.+..+..+|+|.|+|.|.|..|..+.++.
T Consensus 131 ~~g~~v~l~c~~--~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~ 208 (226)
T 4f80_A 131 YKDGGIHLECRS--TGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTAS 208 (226)
T ss_dssp EETTEEEEEEEE--EEEBSCCEEEEECTTSCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTEEEEEE
T ss_pred ccCCceeeEEEe--ccCCCCCEEEEEECCceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEE
Confidence 889999999998 45 699999999965 44443332222222 33445566678899999999999999999999988
Q ss_pred EEEEe
Q psy2145 405 LFVES 409 (808)
Q Consensus 405 l~V~~ 409 (808)
|.|.+
T Consensus 209 v~v~e 213 (226)
T 4f80_A 209 ISIAD 213 (226)
T ss_dssp ECCCT
T ss_pred EEECC
Confidence 88864
No 199
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.84 E-value=1.5e-20 Score=185.26 Aligned_cols=179 Identities=17% Similarity=0.248 Sum_probs=133.2
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee------------ccCcEEEEeeCCeEEEEEcccCcCC
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT------------IGHRFRPIHDFGYVALDIIDTIPED 119 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~D 119 (808)
..|..+ .+.+|++++|.|.+. |.+.|.|||+ |..+. ...|+......+..+|.|.+++.+|
T Consensus 5 ~~~~~~-~v~~G~~v~L~C~~~----~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 79 (211)
T 3tv3_L 5 TQPPSA-SGSPGQSITISCTGT----SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDD 79 (211)
T ss_dssp BCCSEE-EECTTCEEEEEEECC----CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGG
T ss_pred EeCceE-EEcCCCCEEEEEEEC----CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhH
Confidence 344466 899999999999986 6779999993 32221 3357777777788899999999999
Q ss_pred CeeEEEEEEecCc--ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 120 SGTYTCRAVNLVG--FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 120 ~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
+|.|+|.|.|..| .....+.|.|.... ..+|.+...+....+.+
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~v~~~~~~~~~~~ 125 (211)
T 3tv3_L 80 EAVYYCGSLVGNWDVIFGGGTKLTVLGQP----------------------------------KAAPSVTLFPPSSEELQ 125 (211)
T ss_dssp CEEEEEEEEETTTEEEECCCEEEEECCSC----------------------------------CBCCEEEEECCCHHHHH
T ss_pred CEEEEEEEecCCCceeECCCceEEEeCCC----------------------------------CcCCeeEecCCchhhhc
Confidence 9999999999877 34455667775211 35788888777666668
Q ss_pred CCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce--EEEecCce----EEEEEccCCCCCcEEEEEEEEeCceeEEEEE
Q psy2145 198 GQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF--TETNNFGF----VALDIMQCLPEDSGVYTCRAVNALGQAVTSG 271 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~--~~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 271 (808)
|+.++|.|.+.+...|.+.+.|+|||.++..+... .....++. ..|.|.++..+|+|.|+|.|.|..+....++
T Consensus 126 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 126 ANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp TTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 99999999996433356899999999998653111 01111221 3699999999999999999999887665544
No 200
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.84 E-value=1.2e-20 Score=185.84 Aligned_cols=173 Identities=16% Similarity=0.258 Sum_probs=127.2
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEe------------eccCcEEEEeeCCeEEEEEcccCcCCC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPV------------TIGHRFRPIHDFGYVALDIIDTIPEDS 120 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l------------~~~~r~~~~~~~~~~~L~I~~~~~~D~ 120 (808)
.|..+ .+.+|++++|.|.+. +.|.+.|.|||+ |..+ ....|+.+..+++..+|.|.+++.+|+
T Consensus 6 qp~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 82 (210)
T 1lk3_L 6 QPPAL-TVSPGEKLTISCKAS--ESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDT 82 (210)
T ss_dssp CCSEE-EECTTSCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CCCcE-EEcCCCCEEEEeeCC--CccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHC
Confidence 37777 899999999999998 466778999994 3222 113577777777788999999999999
Q ss_pred eeEEEEEEecCcceEE-EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCC
Q psy2145 121 GTYTCRAVNLVGFAEV-QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQ 199 (808)
Q Consensus 121 G~Y~C~a~n~~g~~~~-~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~ 199 (808)
|.|+|.|.|..+.... .+.|.|... ..+|.+...+....+.+|+
T Consensus 83 G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~P~v~~~~~~~~~~~g~ 127 (210)
T 1lk3_L 83 AIYFCQQSWNGPLTFGAGTKLELKRA-----------------------------------DAAPTVSIFPPSTEQLATG 127 (210)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCC-----------------------------------CBCCEEEEECCCHHHHTTT
T ss_pred eEEEEEEEcCCCceeCCCEEEEEcCC-----------------------------------CcCCeEEEECCchhhccCC
Confidence 9999999998764332 346666421 2467777766555556899
Q ss_pred eEEEEEEEeecCCCC-eEEEEeeCCEEccCC-Cc-eEE-EecCce----EEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 200 RAHFECRLIPVSDNT-MKVEWFHNNVPIKSG-SR-FTE-TNNFGF----VALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 200 ~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~-~~-~~~-~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
.++|.|.+.+ ..|. ..|.|+|||..+..+ .. ... ...++. .+|.|.++..+|+|.|+|.|.|....
T Consensus 128 ~v~l~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (210)
T 1lk3_L 128 GASVVCLMNN-FYPRDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTSS 201 (210)
T ss_dssp EEEEEEEEEE-EBSSCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCS
T ss_pred cEEEEEEEEe-EeCCceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCCC
Confidence 9999999963 2344 489999999998765 11 111 112222 37999999999999999999997654
No 201
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=1.5e-20 Score=191.56 Aligned_cols=199 Identities=19% Similarity=0.244 Sum_probs=135.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CE---Eee-------------ccCcEEEEee--CCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GR---PVT-------------IGHRFRPIHD--FGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~---~l~-------------~~~r~~~~~~--~~~~~L~I 112 (808)
+..|..+ .+.+|++|+|.|.+.+.+.+.+.|.|||+ |. .+. ...|+.+..+ .+.++|.|
T Consensus 4 ~~~p~~~-~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (257)
T 1f3r_B 4 LLESGPG-LVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKM 82 (257)
T ss_dssp EEEECCS-EECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEE
T ss_pred EECCCCc-cccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEE
Confidence 4556677 89999999999999852223679999995 22 111 1457777664 56779999
Q ss_pred cccCcCCCeeEEEEEEecCc-------ce--EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCC
Q psy2145 113 IDTIPEDSGTYTCRAVNLVG-------FA--EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQA 183 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g-------~~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (808)
.+++.+|+|.|+|.|.|..| .. ...+.|.|...+..... .. + .....+
T Consensus 83 ~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~--------------------~~--~-~~~~~~ 139 (257)
T 1f3r_B 83 NSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGG--------------------GG--S-GGGGSD 139 (257)
T ss_dssp ESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCC--------------------SS--S-CCCCCE
T ss_pred CCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccc--------------------cc--c-CCCccc
Confidence 99999999999999999854 11 13356777543210000 00 0 000123
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEee--CCEEcc------------CCCceEEEecCceEEEEEccCC
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH--NNVPIK------------SGSRFTETNNFGFVALDIMQCL 249 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~~~ 249 (808)
+.+...+..+.+.+|++++|.|.+ .+.|.+.+.|+| +|..+. ...++......+..+|.|.+++
T Consensus 140 ~~~~~~p~~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 217 (257)
T 1f3r_B 140 IKLTQSPSLLSASVGDRVTLSCKG--SQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQ 217 (257)
T ss_dssp ECSCEETSEECCCTTCCEEEEEEC--SSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCC
T ss_pred eEEEccCCEEEEcCCCCEEEEEEE--CCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCC
Confidence 445556677889999999999999 577778999999 665431 1345665545556689999999
Q ss_pred CCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 250 PEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 250 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
.+|+|.|+|.|.|........+.|.|..
T Consensus 218 ~~D~G~Y~C~a~n~~~~~g~gt~l~V~~ 245 (257)
T 1f3r_B 218 PEDVATYFCYQYNNGYTFGAGTKLELKA 245 (257)
T ss_dssp GGGCSEEEEEEESSSEEECCCCEECCSS
T ss_pred hhhCEEEEEEEeCCCCeECCCEEEEEeC
Confidence 9999999999999652222345666654
No 202
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=7.4e-20 Score=185.23 Aligned_cols=196 Identities=16% Similarity=0.256 Sum_probs=135.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCC--EEe-----------------eccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNG--RPV-----------------TIGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g--~~l-----------------~~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++++|.|.+.+ .| .+.|.|||++ ..+ ....|+.+..+ .+..+
T Consensus 6 v~~p~~~-~v~~G~~v~L~C~~~g--~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 82 (247)
T 2ghw_B 6 LVQSGGG-VVQPGKSLRLSCAASG--FAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLY 82 (247)
T ss_dssp EEEECCE-EECTTCCEEEEEEEES--SCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEE
T ss_pred EEecCCE-EEecCCcEEEEEEecc--ccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEE
Confidence 4456666 8999999999999984 44 6789999942 211 12357777664 45678
Q ss_pred EEEcccCcCCCeeEEEEEEecCcc--eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGF--AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
|.|.+++.+|+|.|+|.|.|..+. ....+.|.|...+...... . ......+|.+.
T Consensus 83 L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~--------------------~---~~~~~~~~~~~ 139 (247)
T 2ghw_B 83 LQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGG--------------------G---SGGGGSETTLT 139 (247)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC-----------------------------------CCCCEE
T ss_pred EEECcCCHHHCEEEEEeeeccCCccccCCceEEEEeccccccccc--------------------c---cCCCCcceEEE
Confidence 999999999999999999997322 2233567665321100000 0 00012456677
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEee--CCEEcc------------CCCceEEEecCceEEEEEccCCCCCc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH--NNVPIK------------SGSRFTETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~~~~~D~ 253 (808)
..+..+.+.+|++++|.|.+ .+.|.+.|.|+| +|..+. ...++.........+|.|.+++.+|+
T Consensus 140 ~~~~~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 217 (247)
T 2ghw_B 140 QSPATLSLSPGERATLSCRA--SQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDF 217 (247)
T ss_dssp EECSEEEECTTSCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGC
T ss_pred ccCCEEEecCCCcEEEEEEe--CCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHC
Confidence 77888889999999999999 577778999999 665441 23566665555667899999999999
Q ss_pred EEEEEEEEeCceeEE-EEEEEEEe
Q psy2145 254 GVYTCRAVNALGQAV-TSGNLLVH 276 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~-~~~~l~V~ 276 (808)
|.|+|.|.|..+... ..+.|.|.
T Consensus 218 G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 218 AVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEEEEEECSSSSCEECCCEEEEEC
T ss_pred EEEEEEEccCCCceEcCCEEEEEC
Confidence 999999998644332 34567775
No 203
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.84 E-value=2e-20 Score=184.43 Aligned_cols=172 Identities=15% Similarity=0.233 Sum_probs=127.2
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEecC------------CCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPLE------------DSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|++++|.|.+ . |.+.+.|+|+ |..+. ...++......+..+|.|.+++.+|+|.|+|.
T Consensus 11 ~v~~G~~v~L~C~~--~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 11 SGSPGQSITISCTG--T--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EECTTCEEEEEEEC--C--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred EEcCCCCEEEEEEE--C--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 68899999999998 4 8899999994 33221 34577776677778999999999999999999
Q ss_pred EEeCCe--eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 581 ATNALG--EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 581 a~N~~G--~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.|..| .....+.|.|...+. .+|.+...... ..+.+|+.++|.|
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~v~~~~~~-~~~~~g~~v~l~C 133 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQPK--------------------------------AAPSVTLFPPS-SEELQANKATLVC 133 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSCC--------------------------------BCCEEEEECCC-HHHHHTTCEEEEE
T ss_pred EecCCCceeECCCceEEEeCCCC--------------------------------cCCeeEecCCc-hhhhcCCCeEEEE
Confidence 999988 344456677763211 24666665543 3445899999999
Q ss_pred EEeeCCC--CCeEEEEEECCEEccCCCcEE--EEEeCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 659 RVVPVGD--PTMRFEWFVNGVELKMGSRFH--VQHDFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 659 ~v~~~g~--P~p~i~W~~~g~~l~~~~~~~--~~~~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
.+ .|. |.+.|.|+|||.+|..+.... ....++ .+.|.|..+..+|+|.|+|.|.|..|....++.
T Consensus 134 ~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~~ 206 (211)
T 3tv3_L 134 LI--SDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 206 (211)
T ss_dssp EE--EEEBSSCCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEEC
T ss_pred Ee--eeecCCCeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeecc
Confidence 99 564 468999999999986521110 011111 247999999999999999999999987766653
No 204
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.84 E-value=5.6e-20 Score=179.44 Aligned_cols=181 Identities=12% Similarity=0.142 Sum_probs=128.5
Q ss_pred EEeecCcee-ecCCCeEEEEEEEeecCCCCeEEEEeeCC-EEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 186 FTTSLKNCE-IKEGQRAHFECRLIPVSDNTMKVEWFHNN-VPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 186 ~~~~~~~~~-v~~G~~v~L~C~~~~~~~p~~~v~W~~~g-~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
+.+.|.+.. +.+|++++|.|.+ .|.|.+.|.|+++. .++. .+. ...+....|.|.+++.+|+|.|+|.|.|.
T Consensus 3 v~i~p~~~~~~~~G~~v~L~C~~--~g~P~p~i~W~~~~~~~~~--~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 76 (202)
T 1vca_A 3 IETTPESRYLAQIGDSVSLTCST--TGCESPFFSWRTQIDSPLN--GKV--TNEGTTSTLTMNPVSFGNEHSYLCTATCE 76 (202)
T ss_dssp EEEESSSEEEEETTSCEEEEEEE--ESCSSCEEEEEETTCCCCS--SEE--EEETTEEEEEESSCCGGGCSEEEEEEEET
T ss_pred EEECCCCcEEEcCCCcEEEEEee--cCCCCCeEEEECCCCCCcc--ceE--EEcCCccEEEECcCCHHHCEEEEEEEEEC
Confidence 445555544 4599999999999 57888999999843 2221 111 22233447999999999999999999999
Q ss_pred ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC
Q psy2145 264 LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG 343 (808)
Q Consensus 264 ~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g 343 (808)
.|.....+.|.|..+|. .+.+. +. ..+.+|+.++|.|.+ .|
T Consensus 77 ~~~~~~~~~l~V~~~p~----------------------------------~~~~~--~~-~~~~~G~~~~L~C~~--~~ 117 (202)
T 1vca_A 77 SRKLEKGIQVEIYSFPK----------------------------------DPEIH--LS-GPLEAGKPITVKCSV--AD 117 (202)
T ss_dssp TEEEEEEEEEEEEBCCS----------------------------------CCEEE--ES-SCEETTSCEEEEEEE--EE
T ss_pred CceEeeEEEEEEEeCCC----------------------------------CCEeC--Cc-eEEcCCCCEEEEEEE--CC
Confidence 99888888999876431 12222 12 567899999999998 44
Q ss_pred -CCc--cEEEEEECCEeccCCCcEEEE----eeCcEEEEEEccCCCCCCeEEEEEEEcCCcc-------eEEEEEEEEEe
Q psy2145 344 -DSK--LKVTWLRNGVPIQASNRVSTM----HDFGYVALNFKYTYPEDSGTYTCRAVNELGE-------AVTSSTLFVES 409 (808)
Q Consensus 344 -~p~--~~v~W~~~g~~l~~~~~~~~~----~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~-------~~~~~~l~V~~ 409 (808)
.|. +.|+|+|+|.+|......... .......|.|..+..+|.|.|+|.|.|..|. ...+..|.|.+
T Consensus 118 ~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y 197 (202)
T 1vca_A 118 VYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYI 197 (202)
T ss_dssp EBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEEC
T ss_pred cCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEec
Confidence 343 589999999987542100000 0112346788888888999999999998876 34568888887
Q ss_pred cc
Q psy2145 410 KA 411 (808)
Q Consensus 410 ~~ 411 (808)
+|
T Consensus 198 ~P 199 (202)
T 1vca_A 198 SP 199 (202)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 205
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.84 E-value=3.3e-21 Score=189.58 Aligned_cols=180 Identities=20% Similarity=0.283 Sum_probs=134.2
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEc------------cCCCceEEEecCceEEEEEccCC
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPI------------KSGSRFTETNNFGFVALDIMQCL 249 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l------------~~~~~~~~~~~~~~~~L~I~~~~ 249 (808)
.++.|...+..+.+.+|+++.|.|.+ .+.|.+.+.|+|++..+ ....++.... .+|.|.+++
T Consensus 3 ~~~~i~~~~~~~~v~~G~~v~L~C~~--~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~~~ 76 (209)
T 1nbq_A 3 GSVTVHSSEPEVRIPENNPVKLSCAY--SGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLP----TGITFKSVT 76 (209)
T ss_dssp CCCEEECSCSBCCEETTCCCEEECEE--ESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEET----TEEECSCCC
T ss_pred ceEEEEcCCCceEEEcCCCEEEEEEE--eCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeec----cEEEEeeCC
Confidence 35677778888999999999999999 47789999999987652 1233444433 289999999
Q ss_pred CCCcEEEEEEEEeCce--eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEe
Q psy2145 250 PEDSGVYTCRAVNALG--QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHV 327 (808)
Q Consensus 250 ~~D~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v 327 (808)
.+|+|.|+|.|.|..| .....+.|.|..+ |.+........+
T Consensus 77 ~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~-------------------------------------p~~~~~~~~~~~ 119 (209)
T 1nbq_A 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVLVP-------------------------------------PSKPTVNIPSSA 119 (209)
T ss_dssp TTSCSEEEEEEEETTSSCEECCEEECCEEBC-------------------------------------CCCCCCCCBSEE
T ss_pred HHHCcEEEEEEecCCCCccceEEEEEEEecC-------------------------------------CcCCCcccccce
Confidence 9999999999999865 3444566666543 333333334568
Q ss_pred ecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcE-------EEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceE
Q psy2145 328 AENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRV-------STMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAV 400 (808)
Q Consensus 328 ~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~-------~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~ 400 (808)
.+|+.+.|.|.+. .+.|.+.+.|+++|..+....+. .........+|.|.++..+|+|.|+|.|.|..|...
T Consensus 120 ~~g~~~~l~C~~~-~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 198 (209)
T 1nbq_A 120 TIGNRAVLTCSEQ-DGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPM 198 (209)
T ss_dssp ETTSCEEECCCCC-SCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCE
T ss_pred ecCCEEEEEEeCC-CCCCCceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCccc
Confidence 8999999999852 68899999999999988765321 001111223799999999999999999999999985
Q ss_pred EEEEE
Q psy2145 401 TSSTL 405 (808)
Q Consensus 401 ~~~~l 405 (808)
.+..+
T Consensus 199 ~s~~v 203 (209)
T 1nbq_A 199 TSNAV 203 (209)
T ss_dssp ECCCB
T ss_pred ccccE
Confidence 54333
No 206
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=4e-20 Score=178.49 Aligned_cols=168 Identities=12% Similarity=0.091 Sum_probs=123.1
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAV 261 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 261 (808)
.+|.|...+.. .+.+|++|+|.|.+ .+ +...+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 77 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYR 77 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEec--CC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEec
Confidence 47888888877 78999999999998 33 45789999999887521100 0011233489999999999999999999
Q ss_pred eCceeE--EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEE
Q psy2145 262 NALGQA--VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 262 n~~g~~--~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~ 339 (808)
|..|.. +..+.|.|... ..+|.+...+ ...+.+|+.++|.|.+
T Consensus 78 ~~~~~~~~s~~~~l~V~~~----------------------------------~~~p~i~~~p-~~~v~~G~~v~L~C~~ 122 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVTEM----------------------------------YDTPTLSVHP-GPEVISGEKVTFYCRL 122 (188)
T ss_dssp ETTEECCCCCCEEEEEESC----------------------------------SCCCEEEEES-CSEEETTCEEEEEEEC
T ss_pred CCCCCCCCCCceEEEeccc----------------------------------CCCCeEEECC-CCccccCCEEEEEEEc
Confidence 976643 34567777531 1245555444 4568899999999997
Q ss_pred eecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 340 IPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 340 ~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
.+ +.+.+.|+|+|..+... .........|.|.++..+|+|.|+|.|.|..
T Consensus 123 --~~-~~~~~~w~k~g~~~~~~----~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 123 --DT-ATSMFLLLKEGRSSHVQ----RGYGKVQAEFPLGPVTTAHRGTYRCFGSYNN 172 (188)
T ss_dssp --SS-SCSEEEEEEESSSCEEE----EEECSSEEEEEEEECCGGGCEEEEEECEEET
T ss_pred --CC-CCCEEEEEECCcccccc----ccCCCceeEEEECCCCcCCCcEEEEEEEcCC
Confidence 44 45799999999776531 1122334589999999999999999999864
No 207
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.84 E-value=3.5e-20 Score=175.68 Aligned_cols=162 Identities=19% Similarity=0.248 Sum_probs=122.1
Q ss_pred eeecCCCCccccCCCCcEEEEEEEeeCCCC-CceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEe
Q psy2145 51 YTVTKPKSIENLRERGHAHFECKLEPVTDS-NLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVN 129 (808)
Q Consensus 51 ~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p-~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 129 (808)
.+...|..+ .+.+|+.++|.|.+.+ .| .+.+.|+|+|..+..+.+ .|.|.+++.+|+|.|+|.|.|
T Consensus 6 ~i~~~p~~~-~v~~G~~v~l~C~~~~--~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~ 72 (170)
T 3ry4_A 6 VLKLEPPWI-NVLQEDSVTLTCQGAR--SPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ 72 (170)
T ss_dssp EEEEESCCS-EEETTCEEEEEEESCC--CSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETT
T ss_pred EEEeCCCCe-EEECCCcEEEEEEecC--CCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeC
Confidence 344556666 7899999999999985 44 679999999999875422 367789999999999999987
Q ss_pred cCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEee
Q psy2145 130 LVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIP 209 (808)
Q Consensus 130 ~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~ 209 (808)
..+. ..+.|.|.. +|.+. .+....+.+|+.+.|.|.+.
T Consensus 73 ~~~s--~~~~l~v~~--------------------------------------~~~~~-~~~~~~~~~g~~~~l~C~~~- 110 (170)
T 3ry4_A 73 TSLS--DPVHLTVLF--------------------------------------EWLVL-QTPHLEFQEGETIMLRCHSW- 110 (170)
T ss_dssp SBCC--CCEEEEEEC--------------------------------------CSEEE-ECSCSEECTTCCEEEEEEEG-
T ss_pred CCce--EeEEEEEEC--------------------------------------CceEe-cCCCceeecCCeEEEEEECC-
Confidence 5443 345666642 22222 33355688999999999994
Q ss_pred cCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCcee-EEEEEEEEE
Q psy2145 210 VSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQ-AVTSGNLLV 275 (808)
Q Consensus 210 ~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V 275 (808)
.+.|.+.+.|+|+|..+.... ..+ .|.|.++..+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 111 ~~~p~~~~~W~~~g~~~~~~~------~~~--~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V 169 (170)
T 3ry4_A 111 KDKPLVKVTFFQNGKSQKFSH------LDP--TFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITV 169 (170)
T ss_dssp GGCCEEEEEEEETTEEEEEES------SCC--EEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCCCCceEEEEECCeEccccC------CCC--eEEEEeccccCCEEEEEEEEeCcCccccccEEEEE
Confidence 256679999999999875321 112 7999999999999999999999986 344566665
No 208
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.84 E-value=1.2e-20 Score=188.70 Aligned_cols=174 Identities=21% Similarity=0.361 Sum_probs=129.2
Q ss_pred cccCCCceEEEEEEeeCCCCC-cEEEEEECCEecC---------C----CCCeE----------EEeeCcEEEEEECCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPT-LKVEWFRNEKPLE---------D----SSRIT----------TKHDFGYVAMDLSHVR 570 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~-~~v~W~k~g~~l~---------~----~~~~~----------~~~~~~~~~L~I~~v~ 570 (808)
.+.+|+.+.|.|.+ .+.|. +.|.|+|++.... . ..++. +..+ + .|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~--~L~i~~v~ 85 (231)
T 2pet_A 11 EVMRGKSVILDCTP--TGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-G--RLVLAEAQ 85 (231)
T ss_dssp EEETTCCEEECCCC--BSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-C--CEEESSCC
T ss_pred EEEcCCCEEEeccc--CCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-c--eEEEcccC
Confidence 58899999999998 78885 8999998765422 0 11111 2221 2 49999999
Q ss_pred CCCCEEEEEEEEeCC-eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 571 AEDEGIYICKATNAL-GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~-G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
.+|+|.|+|.|.|.. |.....+.|.|...|. .|.+..... ...+.
T Consensus 86 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~---------------------------------~~~~~~~~~-~~~~~ 131 (231)
T 2pet_A 86 VGDERDYVCVVRAGAAGTAEATARLNVFAKPE---------------------------------ATEVSPNKG-TLSVM 131 (231)
T ss_dssp GGGCEEEEEEEECGGGCEEEEEEEEEEEBCCC---------------------------------CCEEEECCS-SCCTT
T ss_pred cccCceEEEEEEecCCCceEEEEEEEEEecCC---------------------------------CcEEecCCc-ceeec
Confidence 999999999999997 8888889999987643 244444332 34577
Q ss_pred CCceE-EEEEEEeeCCCCCeEEEEEECCEEccCCC----cEEEEEe-----CC----EEEEEEccCCCCCcEEEEEEEEe
Q psy2145 650 EGQSA-HYDCRVVPVGDPTMRFEWFVNGVELKMGS----RFHVQHD-----FG----YVTLDITKCVPADSGVYMCKAIN 715 (808)
Q Consensus 650 ~G~~v-~l~C~v~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~-----~~----~~~L~I~~v~~~D~G~Y~C~A~N 715 (808)
+|+.+ .|.|.+. .|.|.|.|.|+|||.++.... ++.+... .+ .+.|.|.....+|+|.|+|.|.|
T Consensus 132 ~g~~~~~l~C~~~-~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n 210 (231)
T 2pet_A 132 EDSAQEIATCNSR-NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHY 210 (231)
T ss_dssp CCSEEEEEEEEEE-EEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEE
T ss_pred CCCceEEEEEEeE-CcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEc
Confidence 89988 9999984 589999999999999998765 5555432 11 25788886666679999999999
Q ss_pred -----CCcc-eEEEEEEEE
Q psy2145 716 -----RAGE-AVSSTSLKV 728 (808)
Q Consensus 716 -----~~G~-~~~s~~l~V 728 (808)
..|. .+.++.|.|
T Consensus 211 ~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 211 SLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp ECGGGCEEEEECCCEECCC
T ss_pred CCcccccccccccceEEEE
Confidence 5666 555666655
No 209
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.84 E-value=5.2e-18 Score=199.87 Aligned_cols=253 Identities=15% Similarity=0.196 Sum_probs=165.2
Q ss_pred CCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcC-CCeeEEEEEEecCcceEEEEEEE
Q psy2145 63 RERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPE-DSGTYTCRAVNLVGFAEVQATLQ 141 (808)
Q Consensus 63 ~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n~~g~~~~~~~l~ 141 (808)
..++.+.|.|.+. |.|.+.+.|.|+|..+..-.+ ..|.|..+... .++.|+|.+.|..|..... .+.
T Consensus 89 ~~~g~l~v~c~~~--g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~ 156 (731)
T 2v5y_A 89 SPPGLLNVYVKVN--NGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVK 156 (731)
T ss_dssp SCSEEEEEEEEET--TCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBE
T ss_pred CCcceEEEEEecC--CCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEE
Confidence 4567999999998 678899999999987642211 14566655233 3478888877777754321 111
Q ss_pred EecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEE-Ee
Q psy2145 142 CRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVE-WF 220 (808)
Q Consensus 142 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~-W~ 220 (808)
+... ....+|.|. .+.++.+.+|++++|.|.+ .+.|.+.+. |+
T Consensus 157 ~~~~---------------------------------~~~~~p~~~-~~~~~~v~~G~~v~l~C~~--~g~P~p~i~~W~ 200 (731)
T 2v5y_A 157 VLGH---------------------------------PCTRTPHFL-RIQNVEVNAGQFATFQCSA--IGRTVAGDRLWL 200 (731)
T ss_dssp EESS---------------------------------CCSSSCEEC-CCCCEEEETTSCEEEEEEE--ESCCCTTCEEEE
T ss_pred eeec---------------------------------ccccccccc-cccceEEeCCCcEEEEEEe--CCCCCCceeEEE
Confidence 2110 114578887 5678999999999999999 588888887 88
Q ss_pred --eCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCcee-EEEEEEEEEeeCCcccccccccchhhhhhhh
Q psy2145 221 --HNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQ-AVTSGNLLVHSKKSIQTETQHGESLSRLQQL 297 (808)
Q Consensus 221 --~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~ 297 (808)
+||..+.......+.......+|.|.++..+|.|.|+|.|.|..|. .+..+.|.|..+|
T Consensus 201 ~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P------------------ 262 (731)
T 2v5y_A 201 QGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPP------------------ 262 (731)
T ss_dssp EESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCC------------------
T ss_pred ecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCC------------------
Confidence 7888775433222222222358999999999999999999999998 6677888887643
Q ss_pred hccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEee-cCC-Cc--cEEEEEECCEeccCCCcEEEEeeCcEE
Q psy2145 298 EQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIP-VGD-SK--LKVTWLRNGVPIQASNRVSTMHDFGYV 373 (808)
Q Consensus 298 e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~-~g~-p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~ 373 (808)
....++.... .....+.|.|.... .|. +. ..|.|...+.. ...+ ......
T Consensus 263 -------------------~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~-----~~~~-~~~~~~ 316 (731)
T 2v5y_A 263 -------------------VPIAPPQLAS-VGATYLWIQLNANSINGDGPIVAREVEYCTASGS-----WNDR-QPVDST 316 (731)
T ss_dssp -------------------CBSSCCEEEE-ECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS-----CEEE-EECCSS
T ss_pred -------------------CCCCCcceec-cCCceEEEEeCCcccCCCCccEEEEEEEEECCCC-----ceEE-eccCcc
Confidence 2222222222 24567888886411 121 21 36777664321 1111 111123
Q ss_pred EEEEccCCCCCCeEEEEEEE--cCCcceEEEEEEEE
Q psy2145 374 ALNFKYTYPEDSGTYTCRAV--NELGEAVTSSTLFV 407 (808)
Q Consensus 374 ~L~I~~v~~~d~G~Y~C~a~--n~~g~~~~~~~l~V 407 (808)
.+.|.++.+.+...|+|.|. |..|....+..+.+
T Consensus 317 ~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~ 352 (731)
T 2v5y_A 317 SYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRT 352 (731)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEE
T ss_pred eEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEe
Confidence 78999999999999999999 99987654433333
No 210
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.83 E-value=4.7e-21 Score=190.55 Aligned_cols=183 Identities=19% Similarity=0.279 Sum_probs=127.0
Q ss_pred cccCCCceEEEEEEeeCCCCC-----cEEEEEECCEec-------------CCCCCeEEEee---CcEEEEEECCCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPT-----LKVEWFRNEKPL-------------EDSSRITTKHD---FGYVAMDLSHVRAED 573 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~-----~~v~W~k~g~~l-------------~~~~~~~~~~~---~~~~~L~I~~v~~~D 573 (808)
.+.+|+++.|.|.+ .+.|. +.|.|+|++... ....++.+..+ .+..+|.|.+++.+|
T Consensus 6 ~~~~G~~v~L~C~~--~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 6 VALVDTDATLRCSF--SPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCTTSCEEECCBC--CCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred EEECCCCeEEEEEe--cCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 57899999999998 66654 789999987443 11233333221 123479999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
+|.|+|.+.|. +..+..+.|.|...+ .+|.+.... ...+.+|+.
T Consensus 84 ~G~Y~C~~~~~-~~~~~~~~l~V~~~~---------------------------------~~p~i~~~~--~~~v~~G~~ 127 (222)
T 4i0k_A 84 EGSYTCFVSIQ-DFDSAAVSLQVAAPY---------------------------------SKPSMTLEP--NKDLRPGNM 127 (222)
T ss_dssp CSCEEEEEEEC-CCCCCCCCCCCCBCC---------------------------------CCCEEECCC-------CCSE
T ss_pred CEEEEEEEEeC-CCceEEEEEEEEcCC---------------------------------CCCcEEeCC--CceecCCce
Confidence 99999999986 444444455544321 135544332 235788999
Q ss_pred EEEEEEEeeCCCCCeEEEEEE-CCEEccCCCcEEEEE--eCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEe
Q psy2145 654 AHYDCRVVPVGDPTMRFEWFV-NGVELKMGSRFHVQH--DFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 654 v~l~C~v~~~g~P~p~i~W~~-~g~~l~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~ 730 (808)
+.|.|.+. .|.|.|.|.|++ +|..+.......... ++.+..|.|.++..+|+|.|+|.|.|..|....++.|.|.+
T Consensus 128 ~~l~C~~~-~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 128 VTITCSSY-QGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp EEEEEEEE-EEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred EEEEEecc-cccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 99999985 589999999999 677665433333322 23356789999999999999999999999999999999998
Q ss_pred CCCccc
Q psy2145 731 KSDIVS 736 (808)
Q Consensus 731 ~p~~~~ 736 (808)
+|..+.
T Consensus 207 ~p~~~~ 212 (222)
T 4i0k_A 207 QPLTFP 212 (222)
T ss_dssp ------
T ss_pred CccccC
Confidence 886544
No 211
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.83 E-value=4.2e-20 Score=183.10 Aligned_cols=177 Identities=20% Similarity=0.319 Sum_probs=125.7
Q ss_pred CCCccccCCCCcEEEEEEEeeCCC-CCceEEEEeCC---EE------------ee---ccCcEEEEeeCCeEEEEEcccC
Q psy2145 56 PKSIENLRERGHAHFECKLEPVTD-SNLKVEWFKNG---RP------------VT---IGHRFRPIHDFGYVALDIIDTI 116 (808)
Q Consensus 56 p~~~~~v~~G~~v~l~C~~~~~~~-p~~~v~W~~~g---~~------------l~---~~~r~~~~~~~~~~~L~I~~~~ 116 (808)
|..+ .+.+|++++|.|.+.+ . |.+.|.|||.. .. .. ...|+.+....+..+|.|.+++
T Consensus 7 ~p~~-~v~~G~~v~L~C~~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (218)
T 3s96_B 7 SSSA-SFSLGASAKLTCTLNS--QHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQ 83 (218)
T ss_dssp CSEE-EEETTSCEEEEEEECG--GGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCC
T ss_pred CCcE-EECCCCcEEEEEECCC--CCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCC
Confidence 3366 8999999999999995 5 78899999921 11 11 1147777667778899999999
Q ss_pred cCCCeeEEEEEEecCc-----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecC
Q psy2145 117 PEDSGTYTCRAVNLVG-----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLK 191 (808)
Q Consensus 117 ~~D~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~ 191 (808)
.+|+|.|+|.|.|..| .....+.|.|...+ ..+|.+...+.
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~~~~~~~ 129 (218)
T 3s96_B 84 PEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP----------------------------------KSTPTLTVFPP 129 (218)
T ss_dssp GGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC----------------------------------CBCCEEEEECC
T ss_pred cccCEEEEEEEecCCCCceeEEEcCcEEEEEecCC----------------------------------CCCceEEeeCC
Confidence 9999999999999876 22334567775321 35777877666
Q ss_pred ceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceE--EEecCce---EEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 192 NCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFT--ETNNFGF---VALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 192 ~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~--~~~~~~~---~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
...+..|+.++|.|.+.+ ..|.+ .|.|+|||.++..+.... ...++.+ ..|.|.....+|+|.|+|.|.|..+
T Consensus 130 ~~~~~~~~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 130 SSEELKENKATLVCLISN-FSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp CHHHHHTTEEEEEEEEEE-EBSSCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred CcccccCCcEEEEEEECc-ccCCCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 666677899999999963 24555 999999999987532111 1112111 2488888888999999999999987
Q ss_pred eEEEE
Q psy2145 266 QAVTS 270 (808)
Q Consensus 266 ~~~~~ 270 (808)
....+
T Consensus 209 ~~~~~ 213 (218)
T 3s96_B 209 TVEKS 213 (218)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 65544
No 212
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.83 E-value=3.6e-20 Score=182.89 Aligned_cols=170 Identities=15% Similarity=0.209 Sum_probs=128.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eeec---------cCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVTI---------GHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~~---------~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
...|..+ .+.+|++++|.|.+. +.|.+.|.|||++ . .+.. ..|+.+...++..+|.|.+++.+
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 5 TQTPASV-SEPVGGTVTIKCQAS--QSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp EEECSEE-EEETTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred EeCCCeE-EEcCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 3446667 899999999999998 4678899999942 1 1211 46888777778889999999999
Q ss_pred CCeeEEEEEEecCcc---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceee
Q psy2145 119 DSGTYTCRAVNLVGF---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEI 195 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v 195 (808)
|+|.|+|.|.|..+. ....+.|.|... ..+|.+...+....+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~v~~~~~~~~~ 126 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGD-----------------------------------PVAPTVLIFPPSADL 126 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECC-----------------------------------CBCCEEEEECCCHHH
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCC-----------------------------------CcCCeEEEeCCchhh
Confidence 999999999997763 344456666431 457778777766677
Q ss_pred cCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEE---EecCce----EEEEEccCCCCCcEEEEEEEE
Q psy2145 196 KEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTE---TNNFGF----VALDIMQCLPEDSGVYTCRAV 261 (808)
Q Consensus 196 ~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~---~~~~~~----~~L~I~~~~~~D~G~Y~C~a~ 261 (808)
.+|+.++|.|.+.+ +.|.+.|.|+|+|..+..+..... ...++. .+|.|.++..+|+|.|+|.|.
T Consensus 127 ~~g~~v~l~C~~~g-~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 127 VATGTVTIVCVANK-YFPDVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp HTTSEEEEEEEEEE-EBSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ccCCcEeEEEEEec-ccCCcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 78999999999953 378899999999999865320110 011111 369999999999999999998
No 213
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.83 E-value=6.6e-20 Score=180.82 Aligned_cols=176 Identities=15% Similarity=0.212 Sum_probs=127.9
Q ss_pred CCCccccCCCCcEEEEEEEeeCCCC---CceEEEEeC--CEEe------------eccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 56 PKSIENLRERGHAHFECKLEPVTDS---NLKVEWFKN--GRPV------------TIGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 56 p~~~~~v~~G~~v~l~C~~~~~~~p---~~~v~W~~~--g~~l------------~~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
|..+ .+.+|++++|.|.+.+ .| .+.|.|||+ |..+ ....|+....+.+..+|.|.+++.+
T Consensus 7 p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 83 (212)
T 1q0x_L 7 ESAL-TTSPGETVTLTCRSST--GAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTE 83 (212)
T ss_dssp CSEE-EECTTCCEEEEEEESS--SCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeE-eecCCCCEEEEEEecc--cccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCcc
Confidence 7777 8999999999999984 44 478999995 3332 1245777766777789999999999
Q ss_pred CCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 119 DSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|+|.|+|.|.|..+.. .....|.|.... ..+|.+...+....+.+
T Consensus 84 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~v~~~~~~~~~~~ 129 (212)
T 1q0x_L 84 DEAIYFCALWSNNKLVFGGGTKLTVLGQP----------------------------------KSSPTVTLFPPSSEELS 129 (212)
T ss_dssp GCEEEEEEEECSSCEEECCCEEEEECCSC----------------------------------CBCCEEEEECCCHHHHT
T ss_pred CCEEEEEEEecCchhhcCCCeEEEEecCC----------------------------------CCCCeeEEeCCCHHHcc
Confidence 9999999999976532 223455553211 24788877666555668
Q ss_pred CCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCce--EEEecCc----eEEEEEccCCCCCcEEEEEEEEeCceeEEE
Q psy2145 198 GQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRF--TETNNFG----FVALDIMQCLPEDSGVYTCRAVNALGQAVT 269 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 269 (808)
|+.++|.|.+.+ ..|. ..|.|+|||..+..+... .....++ ...|.|..+..+|+|.|+|.|.|.......
T Consensus 130 g~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 207 (212)
T 1q0x_L 130 TAKATLVCTITD-FYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNK 207 (212)
T ss_dssp TTEEEEEEEEEE-EBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CCcEEEEEEEEE-EeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceee
Confidence 999999999964 2343 499999999998765221 1112222 236899999999999999999998665433
No 214
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.83 E-value=8.9e-20 Score=187.84 Aligned_cols=201 Identities=19% Similarity=0.266 Sum_probs=134.1
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCE-----ec---------CCCCCeEEEeeCcEEEEEECC
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEK-----PL---------EDSSRITTKHDFGYVAMDLSH 568 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~-----~l---------~~~~~~~~~~~~~~~~L~I~~ 568 (808)
.+.|...+.++ .+.+|++|+|.|.+ .+.|.+.|.|+|++. .+ ....|+.+...++..+|.|.+
T Consensus 12 ~~~v~~~p~~~-~v~~G~~v~L~C~~--~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 88 (276)
T 3auv_A 12 DIQMTQSPSSL-SASVGDRVTITCRA--SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISS 88 (276)
T ss_dssp CCCEEEECSEE-ECCTTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred ceeEEeCCCeE-EEcCCCCEEEEeEc--CCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEcc
Confidence 34556555555 68999999999999 788999999998642 11 124577777677777999999
Q ss_pred CCCCCCEEEEEEEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC-eEEeecCCCc
Q psy2145 569 VRAEDEGIYICKATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP-IFTQLLTGTS 646 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P-~~~~~~~~~~ 646 (808)
++.+|+|.|.|.|.|..+. ....+.|.|...+...... .....+| .+...+ ...
T Consensus 89 v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~-----------------------~~~~~~p~~~~~~p-~~~ 144 (276)
T 3auv_A 89 LQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEG-----------------------RSGGGGSEVQLVES-GGG 144 (276)
T ss_dssp CCGGGCEEEEEEECSSSSCCCCCCEEEEC----------------------------------------CCEEEEE-CCE
T ss_pred CChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccc-----------------------cccccCcceEEECC-Cce
Confidence 9999999999999998654 2233566666543200000 0000112 223332 346
Q ss_pred cccCCceEEEEEEEeeCCCC--CeEEEEEECC--EEc-----------------cCCCcEEEEEe--CCEEEEEEccCCC
Q psy2145 647 EIMEGQSAHYDCRVVPVGDP--TMRFEWFVNG--VEL-----------------KMGSRFHVQHD--FGYVTLDITKCVP 703 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P--~p~i~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~I~~v~~ 703 (808)
.+.+|++++|.|.+ .|.| .+.|.|||++ ..+ ....|+.+..+ .+..+|.|.++..
T Consensus 145 ~v~~G~~v~L~C~~--~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 222 (276)
T 3auv_A 145 LVQPGGSLRLSCAA--SGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRA 222 (276)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EecCCCeEEEEEEe--cCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCCh
Confidence 78999999999999 6776 5899999963 221 12467877765 4567899999999
Q ss_pred CCcEEEEEEEEeCC---cce--EEEEEEEEEeCC
Q psy2145 704 ADSGVYMCKAINRA---GEA--VSSTSLKVKSKS 732 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~---G~~--~~s~~l~V~~~p 732 (808)
+|+|.|+|.|.|.. +.. ...+.|.|...+
T Consensus 223 ~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~~ 256 (276)
T 3auv_A 223 EDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSAS 256 (276)
T ss_dssp GGCEEEEEEEECSSTTCSCCCBCCCEEEEEC---
T ss_pred hHCEEEEEEEEcCcCCcCceEECCCEEEEEcccc
Confidence 99999999999983 221 123677776543
No 215
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.83 E-value=3.3e-20 Score=183.43 Aligned_cols=185 Identities=11% Similarity=0.091 Sum_probs=129.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCC-ceEEEEeCCEEeecc------------------CcEEEEe---eCCeEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSN-LKVEWFKNGRPVTIG------------------HRFRPIH---DFGYVAL 110 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~-~~v~W~~~g~~l~~~------------------~r~~~~~---~~~~~~L 110 (808)
+..|..+ .|.+|++++|.|.+.+.+.+. +.|.|+|++..+... .|+.... ..+..+|
T Consensus 3 l~~p~~v-tv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL 81 (218)
T 4frw_A 3 LETSDVV-TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSV 81 (218)
T ss_dssp EECCSEE-EEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCE
T ss_pred EeCCCeE-EEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEE
Confidence 3467777 899999999999998522221 358999987544321 1222111 1234579
Q ss_pred EEcccCcCCCeeEEEEEEecCcceEEEE-EEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 111 DIIDTIPEDSGTYTCRAVNLVGFAEVQA-TLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 111 ~I~~~~~~D~G~Y~C~a~n~~g~~~~~~-~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
.|.+++.+|+|.|.|.+.+..+...... .+.+. ..++.+...
T Consensus 82 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~ 124 (218)
T 4frw_A 82 LLRNAVQADEGEYECRVSTFPAGSFQARLRLRVL-------------------------------------VPPLPSLNP 124 (218)
T ss_dssp EESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-------------------------------------BCCCCEEEE
T ss_pred EEeeccHHHCCceeEEEEeccCceeeeEEEEEEe-------------------------------------eeccceeee
Confidence 9999999999999999998766544333 33332 223334445
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecC-ceEEEEEccCCCCCcEEEEEEEEeCceeEE
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNF-GFVALDIMQCLPEDSGVYTCRAVNALGQAV 268 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 268 (808)
.....+.+|+.+.|.|.+ .+.|.+.|+|+++|..+.....+...... ....|.|.++..+|+|.|+|+|+|..|...
T Consensus 125 ~~~~~~~~~~~~~~~c~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~ 202 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTA--EGSPAPSVTWDTEVKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQD 202 (218)
T ss_dssp CSCEETTCCSEEEEEEEE--EEBSCCEEEEEESSCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSSC
T ss_pred eeeeeeeeccccceeeec--cCCcCceEEEEECCcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeE
Confidence 566778899999999999 57888999999999887654333221111 133799999999999999999999999877
Q ss_pred EEEEEEEee
Q psy2145 269 TSGNLLVHS 277 (808)
Q Consensus 269 ~~~~l~V~~ 277 (808)
..+.|.|..
T Consensus 203 ~~~t~~v~V 211 (218)
T 4frw_A 203 QRITHILHV 211 (218)
T ss_dssp EEEEEECCE
T ss_pred EEEEEEEEE
Confidence 776666643
No 216
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.83 E-value=8.9e-20 Score=178.17 Aligned_cols=171 Identities=11% Similarity=0.110 Sum_probs=120.2
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeE-EEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRIT-TKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.|...+. ..+.+|++|+|.|.+ . .|.+.+.|+|+|..+....... .........|.|.+++.+|+|.|+|.
T Consensus 7 ~~P~i~~~p~--~~v~~G~~v~L~C~~--~-~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 7 RKPSLLAHPG--PLVKSEETVILQCWS--D-VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp CCCEEEEESC--SEEETTCCEEEEEEE--S-SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEEEcC--CccCCCCcEEEEEec--c-CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEe
Confidence 4677766554 258899999999998 4 4778999999998664321110 01111234799999999999999999
Q ss_pred EEeCCe-----eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEE
Q psy2145 581 ATNALG-----EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAH 655 (808)
Q Consensus 581 a~N~~G-----~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~ 655 (808)
|.|..+ ..+..+.|.|.... .+|.+..... ..+.+|+.++
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~~~~---------------------------------~~p~i~~~p~--~~v~~G~~v~ 126 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVIIGLY---------------------------------EKPSLSAQPG--PTVLAGENVT 126 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEECSS---------------------------------CCCEEEEESC--SEECTTCEEE
T ss_pred EecCCCCccccCCCCCEEEEeeccC---------------------------------CCCceecCCC--CccCCCCeEE
Confidence 987532 23445677776421 2466665543 3688999999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeC-CEEEEEEccCCCCCcEEEEEEEEeCC
Q psy2145 656 YDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF-GYVTLDITKCVPADSGVYMCKAINRA 717 (808)
Q Consensus 656 l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y~C~A~N~~ 717 (808)
|.|.+ .+ |.+.|.|+|||..+...........+ ....|.|.++. |+|.|+|.|.|..
T Consensus 127 L~C~~--~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 127 LSCSS--RS-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEE--SS-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred EEEeC--CC-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 99998 55 56899999999877643222221111 14589999998 9999999999874
No 217
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.83 E-value=1.2e-19 Score=184.50 Aligned_cols=176 Identities=23% Similarity=0.369 Sum_probs=129.2
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEec-----------------CCCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPL-----------------EDSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l-----------------~~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|+ +..+ ....|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (256)
T 1nqb_A 11 LVKPGASVKLSCKA--SGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTS 88 (256)
T ss_dssp EECTTCCEEEEEEE--CSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred eecCCCcEEEEEEe--ccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCCh
Confidence 58899999999999 6775 678999994 3221 01357776654 4567899999999
Q ss_pred CCCEEEEEEEEeCCee-----EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 572 EDEGIYICKATNALGE-----AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~-----~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+|+|.|.|.|.|..|. ....+.|.|... |.+...+. ..
T Consensus 89 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~------------------------------------~~v~~~p~-~~ 131 (256)
T 1nqb_A 89 EDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSD------------------------------------IELTQTPL-SL 131 (256)
T ss_dssp GGCEEEEEEECCTTSSSSCSEECCCEEEEECCC------------------------------------CCEEEECS-EE
T ss_pred hhCEEEEEEEeeccCccceeEEcCceeeeeccc------------------------------------ccEEecCc-EE
Confidence 9999999999998763 122355666532 33333322 24
Q ss_pred cccCCceEEEEEEEeeCCCCCe-----EEEEEE--CCEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCcE
Q psy2145 647 EIMEGQSAHYDCRVVPVGDPTM-----RFEWFV--NGVELK------------MGSRFHVQHDFGYVTLDITKCVPADSG 707 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P~p-----~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G 707 (808)
.+.+|++++|.|.+ .|.|.+ .|.||| +|..+. ...++.+..+....+|.|.++..+|+|
T Consensus 132 ~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG 209 (256)
T 1nqb_A 132 PVSLGDQASISCRS--SQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLG 209 (256)
T ss_dssp EECTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EEecCCcEEEEeEe--cCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCE
Confidence 68899999999999 788875 999999 676542 146787777777889999999999999
Q ss_pred EEEEEEEeCCcceE-EEEEEEEEeC
Q psy2145 708 VYMCKAINRAGEAV-SSTSLKVKSK 731 (808)
Q Consensus 708 ~Y~C~A~N~~G~~~-~s~~l~V~~~ 731 (808)
.|+|.|.|..+... ..+.|.|..+
T Consensus 210 ~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 210 VYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp EEEEEECSSSSCEECCCEEEEECC-
T ss_pred EEEEEEccCCceEECCCEEEEEECC
Confidence 99999999654322 2356777644
No 218
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.83 E-value=7.9e-20 Score=180.23 Aligned_cols=173 Identities=16% Similarity=0.273 Sum_probs=124.5
Q ss_pred cccCCCceEEEEEEeeCCCC---CcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP---TLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P---~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 577 (808)
.+.+|+.++|.|.+ .+.| .+.|.|+|++ ..+ ....++.....++...|.|.+++.+|+|.|
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (212)
T 1q0x_L 11 TTSPGETVTLTCRS--STGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIY 88 (212)
T ss_dssp EECTTCCEEEEEEE--SSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred eecCCCCEEEEEEe--cccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEE
Confidence 58899999999999 7777 4789999963 222 124577776667778999999999999999
Q ss_pred EEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEE
Q psy2145 578 ICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHY 656 (808)
Q Consensus 578 ~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l 656 (808)
.|.|.|..|... ....|.|...+. .+|.+...... ..+.+|+.++|
T Consensus 89 ~C~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~v~~~~~~-~~~~~g~~v~L 135 (212)
T 1q0x_L 89 FCALWSNNKLVFGGGTKLTVLGQPK--------------------------------SSPTVTLFPPS-SEELSTAKATL 135 (212)
T ss_dssp EEEEECSSCEEECCCEEEEECCSCC--------------------------------BCCEEEEECCC-HHHHTTTEEEE
T ss_pred EEEEecCchhhcCCCeEEEEecCCC--------------------------------CCCeeEEeCCC-HHHccCCcEEE
Confidence 999999876432 234555543211 24666654443 23557999999
Q ss_pred EEEEeeCCC-CCe-EEEEEECCEEccCCCcEE-EEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 657 DCRVVPVGD-PTM-RFEWFVNGVELKMGSRFH-VQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 657 ~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~-~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
.|.+ .|. |.+ .|.|+|||+.+..+.... ... .++ .+.|.|..+..+|+|.|+|.|.|..+....++
T Consensus 136 ~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~v 209 (212)
T 1q0x_L 136 VCTI--TDFYPGVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSSNKTL 209 (212)
T ss_dssp EEEE--EEEBSSCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEEEEEE
T ss_pred EEEE--EEEeCCCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcceeeee
Confidence 9999 564 443 999999999987652211 111 111 24799999999999999999999987655444
No 219
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.83 E-value=3e-20 Score=177.19 Aligned_cols=157 Identities=15% Similarity=0.299 Sum_probs=118.6
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEE--CCEec----------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFR--NEKPL----------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKAT 582 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k--~g~~l----------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 582 (808)
...+|++|+|.|...+.+.|.+.|.|+| ++..| ..+.|+.+..+ | +|.|.+++.+|+|.|+|.|.
T Consensus 10 ~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n-g--sL~I~~v~~~DsG~Y~c~~~ 86 (182)
T 1hnf_A 10 WGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN-G--TLKIKHLKTDDQDIYKVSIY 86 (182)
T ss_dssp EEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT-S--CEEECSCCGGGCEEEEEEEE
T ss_pred EEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC-C--CEEECCCChhhCEEEEEEEE
Confidence 5788999999995432346678999999 98877 34567766643 4 79999999999999999999
Q ss_pred eCCeeEEE--EEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEE
Q psy2145 583 NALGEAVT--TASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRV 660 (808)
Q Consensus 583 N~~G~~~~--s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v 660 (808)
|..|.... .+.|.|.... .+|.+... +..+.|.|.+
T Consensus 87 n~~g~~~~~~~~~L~V~~~~---------------------------------~~P~i~~~---------~~~v~L~C~~ 124 (182)
T 1hnf_A 87 DTKGKNVLEKIFDLKIQERV---------------------------------SKPKISWT---------CINTTLTCEV 124 (182)
T ss_dssp ETTSCEEEEEEEEEEEECCC---------------------------------CCCEEEEE---------TTTTEEEEEC
T ss_pred eCCCceeEEEEEEEEEcCcC---------------------------------CCCEEEEc---------cCcEEEEeEc
Confidence 99887654 4566665421 23655432 3369999999
Q ss_pred eeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 661 VPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 661 ~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
.|.|.|.|.|++||..| .+ ... .|.+.. ..+|+|.|+|.|.|.+|..+++..+.+.
T Consensus 125 --~~~p~~~~~W~~~g~~l-~~-------~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~c~ 180 (182)
T 1hnf_A 125 --MNGTDPELNLYQDGKHL-KL-------SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVSCP 180 (182)
T ss_dssp --SSCSSCEEEEEESSCEE-EE-------ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEEEC
T ss_pred --cCCCCCEEEEEECCEEC-CC-------CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEcceecCC
Confidence 79999999999999988 21 122 233332 4789999999999999999998887553
No 220
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.83 E-value=3e-20 Score=181.57 Aligned_cols=172 Identities=17% Similarity=0.228 Sum_probs=121.8
Q ss_pred cccCCCceEEEEEEeeC--CCCCcEEEEEECCEecCC------------CCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPV--GDPTLKVEWFRNEKPLED------------SSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~--g~P~~~v~W~k~g~~l~~------------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|+++.|.|.+.+. +.|.+.+.|+|++..+.. ..|..+.. .+..+|.|.+++.+|+|.|+|.
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~-~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDI-TNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEES-TTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEcc-CCCcEEEEecccchhCeEEEEE
Confidence 57899999999998311 246789999999987621 12333321 2233799999999999999999
Q ss_pred EEeCCeeE-----EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEE
Q psy2145 581 ATNALGEA-----VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAH 655 (808)
Q Consensus 581 a~N~~G~~-----~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~ 655 (808)
|.|..|.. ...+.|.|...+ .+|.+.... ...|+.++
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~---------------------------------~~p~~~~~~-----~~~g~~~~ 125 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADF---------------------------------PTPSISDFE-----IPTSNIRR 125 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCC---------------------------------CCCEEEEEE-----CSSTTEEE
T ss_pred EEcCCCCccccccccEEEEEEcCCC---------------------------------CCCceEecc-----CCCCCeEE
Confidence 99987654 345666665432 124444321 24599999
Q ss_pred EEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-eCC-EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 656 YDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQH-DFG-YVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 656 l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~-~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
|.|.+. .|.|.|.|.|+|||..|.......... +++ +....+..+..+|+|.|+|.|.|..|..+..+.+
T Consensus 126 l~C~~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~~ 197 (201)
T 1dr9_A 126 IICSTS-GGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNW 197 (201)
T ss_dssp EEEEEE-EESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEEE
T ss_pred EEEecC-CccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEec
Confidence 999983 399999999999999988653322222 223 3333456667799999999999999998877665
No 221
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.83 E-value=3.5e-20 Score=187.37 Aligned_cols=216 Identities=11% Similarity=0.070 Sum_probs=121.5
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEE-EeeCCeEEEEEcccCcCCCeeEEEEEEecCc
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRP-IHDFGYVALDIIDTIPEDSGTYTCRAVNLVG 132 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~-~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 132 (808)
..|. . .+.+|++|+|.|.+.+ +.+.|.|||+|..+........ ........|.|.+++.+|+|.|+|.+.|..+
T Consensus 12 ~~P~-~-~V~~G~~VtL~C~~~~---~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 86 (257)
T 1b6u_A 12 AHPG-P-LVKSEETVILQCWSDV---RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHS 86 (257)
T ss_dssp CBSC-S-EEESSCCEEEEEEESS---CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSSC
T ss_pred EcCC-C-EecCCCCEEEEEecCC---CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccCC
Confidence 3444 4 7899999999999973 4568999999976542211100 0112345899999999999999999986432
Q ss_pred -----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 133 -----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 133 -----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
..+..+.|.|... ..+|.+...+. ..+.+|++|+|.|.+
T Consensus 87 ~~~~s~~S~~~~L~V~~~-----------------------------------~~~P~l~~~p~-~~V~~G~~vtL~C~~ 130 (257)
T 1b6u_A 87 PYQLSAPSDPLDIVITGL-----------------------------------YEKPSLSAQPG-PTVLAGESVTLSCSS 130 (257)
T ss_dssp TTSCCCCCCCEEEEEECS-----------------------------------SCCCEEECSSC-TTCBTTCEEEEEEEC
T ss_pred CccccccCCCEEEecccC-----------------------------------CCCcceEccCC-CccCCCCEEEEEEeC
Confidence 2244566777532 24567766664 468899999999998
Q ss_pred eecCCCCeEEEEeeCCEEccCCCceEEEec-CceEEEEEccCCCCCcEEEEEEEEeCce-----eEEEEEEEEEeeCCcc
Q psy2145 208 IPVSDNTMKVEWFHNNVPIKSGSRFTETNN-FGFVALDIMQCLPEDSGVYTCRAVNALG-----QAVTSGNLLVHSKKSI 281 (808)
Q Consensus 208 ~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~I~~~~~~D~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~i 281 (808)
.+. .+.+.|+|||..+........... .....|.|.+++ |+|.|+|.|.|..+ ..+..+.|.|...|
T Consensus 131 --~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p-- 203 (257)
T 1b6u_A 131 --RSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNP-- 203 (257)
T ss_dssp --SSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC--
T ss_pred --CCC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccC--
Confidence 344 468999999987754332211111 123489999998 99999999997532 22334667666533
Q ss_pred cccccccchhhhhhhhhccccccccccccccCCCCeeccCC-CceEeecCCeEEEEEEEeecCCCccEEEEEECC
Q psy2145 282 QTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM-RDIHVAENQAAHFEARLIPVGDSKLKVTWLRNG 355 (808)
Q Consensus 282 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~-~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g 355 (808)
.+..+. .......|..+.|.|.+ |.+.+.|.|...+
T Consensus 204 -----------------------------------~~~~p~~~~~~~~~g~~~~l~~~~---~~~~~~~~~~~~~ 240 (257)
T 1b6u_A 204 -----------------------------------SNSWPSPTEPSSETGNPRHLHAAA---EQKLISEEDLNLD 240 (257)
T ss_dssp ---------------------------------------------------------------------------
T ss_pred -----------------------------------CCCCCCCcccCccCCCeEEEEEEE---cchHHHHHHhhhh
Confidence 222111 12234569999999986 8888899997744
No 222
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.83 E-value=5.1e-20 Score=182.64 Aligned_cols=184 Identities=14% Similarity=0.168 Sum_probs=125.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee-----------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT-----------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~-----------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++++|.|.+.+.+.+.+.|.|||+ |..+. ...|+.+..+ .+..+|.
T Consensus 4 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (219)
T 1c1e_H 4 LVQSGPE-LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQ 82 (219)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEE
T ss_pred EeCCCCe-EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEE
Confidence 4557777 89999999999999852223679999996 43321 1357776654 3567999
Q ss_pred EcccCcCCCeeEEEEEEecCcce----EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFA----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
|.+++.+|+|.|+|.|.|..+.. ...+.|.|.... ..+|.+.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~ 128 (219)
T 1c1e_H 83 INNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK----------------------------------TTPPSVY 128 (219)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC----------------------------------CBCCEEE
T ss_pred ECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCC----------------------------------CCCCeEE
Confidence 99999999999999999976421 234566665321 2456666
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
..+....+.+|+.++|.|.+.+ ..|.+ .|.|+|+|..+...........+. ...|.|... ..|.|.|+|.|.|.
T Consensus 129 ~~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~-~~d~g~Y~C~a~n~ 206 (219)
T 1c1e_H 129 PLAPGSAAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSS-PRPSETVTCNVAHP 206 (219)
T ss_dssp EECCCSSSCCSSEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEESS-STTTSCCEEEEEEG
T ss_pred EecCccccccCCeEEEEEEccc-ccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEecc-cCCCCEEEEEEEeC
Confidence 5554556779999999999952 27777 999999998753111001111111 126888544 44669999999998
Q ss_pred ceeEEEEEEE
Q psy2145 264 LGQAVTSGNL 273 (808)
Q Consensus 264 ~g~~~~~~~l 273 (808)
.|.......|
T Consensus 207 ~~~~~~~~~i 216 (219)
T 1c1e_H 207 ASSTKVDKKI 216 (219)
T ss_dssp GGTEEEEEEC
T ss_pred CCCccEEEec
Confidence 8876554444
No 223
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.83 E-value=1.3e-19 Score=175.61 Aligned_cols=157 Identities=18% Similarity=0.267 Sum_probs=114.2
Q ss_pred cccCCCceEEEEEEeeCC-CCCcEEEEEECCEecC---CC---------------CCeEEEeeCcEEEEEECCCCCCCCE
Q psy2145 515 AVEEGKNAHFSCRLIPVG-DPTLKVEWFRNEKPLE---DS---------------SRITTKHDFGYVAMDLSHVRAEDEG 575 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g-~P~~~v~W~k~g~~l~---~~---------------~~~~~~~~~~~~~L~I~~v~~~D~G 575 (808)
.+.+|++|+|.|.+ .+ .+.+.|.|+|+|..+. .+ .|+.+. .+ .+|.|.+++.+|+|
T Consensus 9 ~~~~G~~v~L~C~~--~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-~~--~sL~I~~v~~~D~G 83 (193)
T 2if7_A 9 NGILGESVTLPLEF--PAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT-QS--YSLQLSNLKMEDTG 83 (193)
T ss_dssp EEETTSCEEECCCC--CCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC-TT--CCEEECSCCGGGCE
T ss_pred EEEecCeEEEeccC--CCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC-CC--eEEEECCCCcccCc
Confidence 57899999999998 44 5567999999987542 10 233333 12 37999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCc-eE
Q psy2145 576 IYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQ-SA 654 (808)
Q Consensus 576 ~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~-~v 654 (808)
.|+|.|.|..|.....+.|.|...+. +|.+.... ..+..|. .+
T Consensus 84 ~Y~C~~~~~~~~~~~~~~L~V~~~~~---------------------------------~p~i~~~~---~~~~~g~~~v 127 (193)
T 2if7_A 84 SYRAQISTKTSAKLSSYTLRILRQLR---------------------------------NIQVTNHS---QLFQNMTCEL 127 (193)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCE---------------------------------EEEEEECC---C---CSSEEE
T ss_pred eEEEEEEecCCCeEEEEEEEEEccCC---------------------------------CCeEecCc---eeecCCCceE
Confidence 99999999999877788888875422 13333322 1234465 89
Q ss_pred EEEEEEeeCC-CCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCC-CcEEEEEEEEeCCcceEEEEE
Q psy2145 655 HYDCRVVPVG-DPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPA-DSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 655 ~l~C~v~~~g-~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~-D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
+|.|.+ .| .|.|.|.|+++|..+..+. .|.|.....+ |+|.|+|.|.|.+|..+..+.
T Consensus 128 ~L~C~~--~g~~p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~~~ 187 (193)
T 2if7_A 128 HLTCSV--EDADDNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFSVS 187 (193)
T ss_dssp EEEEEE--ESCCTTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEEEE
T ss_pred EEEEEE--ecCCCceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCccccccc
Confidence 999999 57 5689999999999875432 3566544444 899999999999999865543
No 224
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.82 E-value=1.1e-19 Score=180.56 Aligned_cols=181 Identities=15% Similarity=0.193 Sum_probs=126.5
Q ss_pred CCCccccCCCCcEEEEEEEeeCCCC---CceEEEEeCCEEeec---------------cCcEEEEee---CCeEEEEEcc
Q psy2145 56 PKSIENLRERGHAHFECKLEPVTDS---NLKVEWFKNGRPVTI---------------GHRFRPIHD---FGYVALDIID 114 (808)
Q Consensus 56 p~~~~~v~~G~~v~l~C~~~~~~~p---~~~v~W~~~g~~l~~---------------~~r~~~~~~---~~~~~L~I~~ 114 (808)
+..+ .+.+|++++|.|.+.+.+.+ .+.|.|+|++..+.. ..|..+..+ .+..+|.|.+
T Consensus 8 ~~~v-~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~ 86 (222)
T 3sbw_C 8 KDLY-VVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITD 86 (222)
T ss_dssp CSEE-EEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESS
T ss_pred CccE-EEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcC
Confidence 4444 88999999999998732111 458999998744421 134444322 2567899999
Q ss_pred cCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCcee
Q psy2145 115 TIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCE 194 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 194 (808)
++.+|+|.|+|.|.| .|.....+.|.|...+. .|.+.. ...
T Consensus 87 v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~-----------------------------------~~~~~~---~~~ 127 (222)
T 3sbw_C 87 VKLQDAGVYRCMISY-GGADYKRITVKVNAPYN-----------------------------------KINQRI---LVV 127 (222)
T ss_dssp CCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCC-----------------------------------CCEEEE---EEE
T ss_pred cccccCeEEEEEEEe-CCCceeEEEEEEECCCC-----------------------------------CCCcee---eee
Confidence 999999999999999 67777778888864321 121111 125
Q ss_pred ecCCCeEEEEEEEeecCCCCeEEEEeeC-CEEccCCCceEEEe--cCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEE
Q psy2145 195 IKEGQRAHFECRLIPVSDNTMKVEWFHN-NVPIKSGSRFTETN--NFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSG 271 (808)
Q Consensus 195 v~~G~~v~L~C~~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~ 271 (808)
+.+|+.++|.|.+. +.|.+.|.|+++ |..+.......... ++....+.+..+..+|.|.|+|.|.|..|....++
T Consensus 128 ~~~g~~v~L~C~~~--g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~ 205 (222)
T 3sbw_C 128 DPVTSEHELTCQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTA 205 (222)
T ss_dssp ETTTTEEEEEEEEE--EBSCCEEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEE
T ss_pred ecCCCcEEEEEEec--CCCCCeEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCccceeeEE
Confidence 67899999999994 688899999998 66665433322211 12222233345567999999999999999999999
Q ss_pred EEEEeeC
Q psy2145 272 NLLVHSK 278 (808)
Q Consensus 272 ~l~V~~~ 278 (808)
.|.|...
T Consensus 206 ~l~v~~~ 212 (222)
T 3sbw_C 206 ELVIPEL 212 (222)
T ss_dssp EEECCCC
T ss_pred EEEecCC
Confidence 9988653
No 225
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.82 E-value=4.1e-20 Score=184.90 Aligned_cols=181 Identities=16% Similarity=0.239 Sum_probs=132.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC-CceEEEEeCCEE-----ee----c----cCcEE----------EEeeCCeE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS-NLKVEWFKNGRP-----VT----I----GHRFR----------PIHDFGYV 108 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p-~~~v~W~~~g~~-----l~----~----~~r~~----------~~~~~~~~ 108 (808)
+..|..+ .+.+|+++.|.|.+.+ .| .+.|.|+|++.. +. . ..|+. +..+ +
T Consensus 4 v~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~-- 77 (231)
T 2pet_A 4 LSVPPLV-EVMRGKSVILDCTPTG--THDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-G-- 77 (231)
T ss_dssp CCCCSEE-EEETTCCEEECCCCBS--CCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-C--
T ss_pred ccCCCcE-EEEcCCCEEEecccCC--CCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-c--
Confidence 4567777 8999999999999984 56 489999985533 21 1 12222 2222 2
Q ss_pred EEEEcccCcCCCeeEEEEEEecC-cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 109 ALDIIDTIPEDSGTYTCRAVNLV-GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 109 ~L~I~~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
.|.|.+++.+|+|.|+|.|.|.. |.....+.|.|... ...|.+.
T Consensus 78 ~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------p~~~~~~ 122 (231)
T 2pet_A 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK-----------------------------------PEATEVS 122 (231)
T ss_dssp CEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC-----------------------------------CCCCEEE
T ss_pred eEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEec-----------------------------------CCCcEEe
Confidence 39999999999999999999987 77788888888643 2346777
Q ss_pred eecCceeecCCCeE-EEEEEEeecCCCCeEEEEeeCCEEccCCC----ceEEEe-----cCc----eEEEEEccCCCCCc
Q psy2145 188 TSLKNCEIKEGQRA-HFECRLIPVSDNTMKVEWFHNNVPIKSGS----RFTETN-----NFG----FVALDIMQCLPEDS 253 (808)
Q Consensus 188 ~~~~~~~v~~G~~v-~L~C~~~~~~~p~~~v~W~~~g~~l~~~~----~~~~~~-----~~~----~~~L~I~~~~~~D~ 253 (808)
..+....+.+|+.+ .|.|.+. .+.|.+.|.|+|+|.++.... ++.+.. ..+ ...|.|.....+|.
T Consensus 123 ~~~~~~~~~~g~~~~~l~C~~~-~~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~ 201 (231)
T 2pet_A 123 PNKGTLSVMEDSAQEIATCNSR-NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRD 201 (231)
T ss_dssp ECCSSCCTTCCSEEEEEEEEEE-EEBSCCEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGG
T ss_pred cCCcceeecCCCceEEEEEEeE-CcccCCEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCC
Confidence 77777888899998 9999984 367888999999999997665 444332 111 13588876666679
Q ss_pred EEEEEEEEe-----Ccee-EEEEEEEEE
Q psy2145 254 GVYTCRAVN-----ALGQ-AVTSGNLLV 275 (808)
Q Consensus 254 G~Y~C~a~n-----~~g~-~~~~~~l~V 275 (808)
|.|+|.|.| ..|. .+..+.|.|
T Consensus 202 g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 202 ASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred ceEEEEEEcCCcccccccccccceEEEE
Confidence 999999999 4555 445555554
No 226
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.82 E-value=1.6e-19 Score=183.36 Aligned_cols=201 Identities=14% Similarity=0.185 Sum_probs=137.5
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--CCEEee-----------------ccCcEEEEee--CCeEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--NGRPVT-----------------IGHRFRPIHD--FGYVAL 110 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--~g~~l~-----------------~~~r~~~~~~--~~~~~L 110 (808)
++..|..+ .+.+|++|+|.|.+.+...+.+.|.||| .+..+. ...|+.+..+ .+.++|
T Consensus 4 ~~~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 82 (253)
T 3uzq_A 4 LLEQSGAE-LVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYL 82 (253)
T ss_dssp CEEECCCE-EECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred eEecCCCe-eecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEE
Confidence 35567777 8999999999999985323467999999 222111 1357776654 346789
Q ss_pred EEcccCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 111 DIIDTIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 111 ~I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
.|.+++.+|+|.|+|.|.|..+.. ...+.|.|.......... .......+|.+...
T Consensus 83 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~-----------------------~~~~~~~~~~v~~~ 139 (253)
T 3uzq_A 83 HLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGG-----------------------GSGGGGSELVMTQT 139 (253)
T ss_dssp EECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC--------------------------------CCEEEE
T ss_pred EeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCcccccc-----------------------ccCCCcccceEECc
Confidence 999999999999999999865544 245667775321100000 00011346778888
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCe----EEEEeeC--CEEcc------------CCCceEEEecCceEEEEEccCCCC
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTM----KVEWFHN--NVPIK------------SGSRFTETNNFGFVALDIMQCLPE 251 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~----~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~~~~~ 251 (808)
+....+.+|++|+|.|.+ .+.+.+ .+.|||+ |..+. ...++......+..+|.|.+++.+
T Consensus 140 p~~~~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 217 (253)
T 3uzq_A 140 PASLAVSLGQRATISCRA--SENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEAD 217 (253)
T ss_dssp CSEEEECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CCeEEEeCCCCEEEEEEe--cCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHH
Confidence 888999999999999999 566665 8999994 32221 124566555566678999999999
Q ss_pred CcEEEEEEEEeCceeEEE-EEEEEEeeC
Q psy2145 252 DSGVYTCRAVNALGQAVT-SGNLLVHSK 278 (808)
Q Consensus 252 D~G~Y~C~a~n~~g~~~~-~~~l~V~~~ 278 (808)
|+|.|+|.|.|..+.... -+.|.|...
T Consensus 218 DsG~Y~C~~~n~~~~~fg~gt~l~v~~~ 245 (253)
T 3uzq_A 218 DVATYFCQRSNEVPWTFGGGTKLEIKRP 245 (253)
T ss_dssp GCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred HCEEEEEEEccCCCcEECCCEEEEEcCC
Confidence 999999999996543332 356777653
No 227
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.82 E-value=2.3e-19 Score=182.58 Aligned_cols=201 Identities=16% Similarity=0.246 Sum_probs=137.3
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee--------------ccCcEEEEee--CCe
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT--------------IGHRFRPIHD--FGY 107 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~--------------~~~r~~~~~~--~~~ 107 (808)
.+.+...|..+ .+.+|++|+|.|.+.+...+.+.+.|||.. .. +. ...|+.+..+ .+.
T Consensus 6 ~~~~~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 6 HQVQLVQSGAE-VKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp -CCEEEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred ceEEEEecCCc-eecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 34556667777 899999999999998522367799999832 11 11 1247777644 456
Q ss_pred EEEEEcccCcCCCeeEEEEEEec------------CcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccc
Q psy2145 108 VALDIIDTIPEDSGTYTCRAVNL------------VGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEY 175 (808)
Q Consensus 108 ~~L~I~~~~~~D~G~Y~C~a~n~------------~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (808)
++|.|.+++.+|+|.|.|.|.|. .+.....+.|.|..........
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~----------------------- 141 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGG----------------------- 141 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC-----------------------------
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCccccccc-----------------------
Confidence 78999999999999999999986 2333445667775432110000
Q ss_pred cccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeC--CEEcc------------CCCceEEEecCce
Q psy2145 176 IEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHN--NVPIK------------SGSRFTETNNFGF 240 (808)
Q Consensus 176 ~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~--g~~l~------------~~~~~~~~~~~~~ 240 (808)
.......+|.+...+....+.+|++|+|.|.+ .+.+. +.+.|||. +..+. ...++....+...
T Consensus 142 ~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 219 (256)
T 3juy_B 142 GSGGGGSEIVLTQAPGTLSLSPGERATFSCRS--SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTD 219 (256)
T ss_dssp ----CCCCCCEEEECSEEEECTTSCEEEEEEE--SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE
T ss_pred ccCCCcceeEEEecCCeEEEeCCCCEEEEEEE--CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCE
Confidence 00000236778888889999999999999999 45665 89999982 33221 2356666666667
Q ss_pred EEEEEccCCCCCcEEEEEEEEeCceeEE-EEEEEEE
Q psy2145 241 VALDIMQCLPEDSGVYTCRAVNALGQAV-TSGNLLV 275 (808)
Q Consensus 241 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V 275 (808)
.+|.|.+++.+|+|.|+|.|.|..+... ..+.|.|
T Consensus 220 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~g~gt~l~V 255 (256)
T 3juy_B 220 FTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLER 255 (256)
T ss_dssp EEEEESSCCGGGCSEEEEEECCSSCCEECCCEEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEeeCCCceEcCCEEEEE
Confidence 7899999999999999999998544322 2345554
No 228
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.82 E-value=2.6e-19 Score=174.89 Aligned_cols=167 Identities=10% Similarity=0.049 Sum_probs=117.5
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEE-EeeCCeEEEEEcccCcCCCeeEEEEEEec
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRP-IHDFGYVALDIIDTIPEDSGTYTCRAVNL 130 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~-~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 130 (808)
+...|. . .+.+|++++|.|.+. .+.+.|.|||+|..+....+... ........|.|.+++.+|+|.|+|.|.|.
T Consensus 11 i~~~p~-~-~v~~G~~v~L~C~~~---~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~ 85 (201)
T 1nkr_A 11 LLAHPG-P-LVKSEETVILQCWSD---VMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVT 85 (201)
T ss_dssp EEEESC-S-EEETTCCEEEEEEES---SCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBT
T ss_pred EEEEcC-C-ccCCCCcEEEEEecc---CCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecC
Confidence 334454 4 789999999999997 36679999999987653222111 11123357999999999999999999875
Q ss_pred Cc-----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEE
Q psy2145 131 VG-----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFEC 205 (808)
Q Consensus 131 ~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C 205 (808)
.. ..+..+.|.|... ..+|.+...+. ..+.+|++++|.|
T Consensus 86 ~~~~~~~~~s~~~~l~V~~~-----------------------------------~~~p~i~~~p~-~~v~~G~~v~L~C 129 (201)
T 1nkr_A 86 HSPYQVSAPSDPLDIVIIGL-----------------------------------YEKPSLSAQPG-PTVLAGENVTLSC 129 (201)
T ss_dssp TBTTCCCCCCCCEEEEEECS-----------------------------------SCCCEEEEESC-SEECTTCEEEEEE
T ss_pred CCCccccCCCCCEEEEeecc-----------------------------------CCCCceecCCC-CccCCCCeEEEEE
Confidence 31 2234566766532 24677777665 4789999999999
Q ss_pred EEeecCCCCeEEEEeeCCEEccCCCceEEEecC-ceEEEEEccCCCCCcEEEEEEEEeCc
Q psy2145 206 RLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNF-GFVALDIMQCLPEDSGVYTCRAVNAL 264 (808)
Q Consensus 206 ~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~-~~~~L~I~~~~~~D~G~Y~C~a~n~~ 264 (808)
.+. + +.+.+.|+|+|..+...........+ ....|.|.+++ |+|.|+|.|.+..
T Consensus 130 ~~~--~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 130 SSR--S-SYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EES--S-CCSEEEEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETT
T ss_pred eCC--C-CCceEEEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCC
Confidence 983 3 56789999999877543222221111 13479999998 9999999999753
No 229
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.82 E-value=2.4e-19 Score=176.90 Aligned_cols=178 Identities=21% Similarity=0.294 Sum_probs=125.8
Q ss_pred eeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--Ee------------cCCCCCeEEEeeCcEEEEEECCCC
Q psy2145 505 VFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KP------------LEDSSRITTKHDFGYVAMDLSHVR 570 (808)
Q Consensus 505 ~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~------------l~~~~~~~~~~~~~~~~L~I~~v~ 570 (808)
.+...+..+ .+.+|+.+.|.|.+ .+.|.+.|.|+|.+ .. .....++......+..+|.|.+++
T Consensus 3 ~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 79 (213)
T 3r06_A 3 QMTQSPSSL-PASLGDRVTINCQA--SQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLE 79 (213)
T ss_dssp CEEEECSEE-EECTTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eeEeCCCEE-EecCCCcEEEEEEe--CCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCC
Confidence 444444444 68899999999999 78899999999832 11 112457777767777899999999
Q ss_pred CCCCEEEEEEEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 571 AEDEGIYICKATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
.+|+|.|+|.|.|..|. ......|.|... ..+|.+...... ..+.
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~---------------------------------~~~p~v~~~~~~-~~~~ 125 (213)
T 3r06_A 80 SEDIGSYYCQQYYNYPWTFGPGTKLEIKRA---------------------------------DAKPTVSIFPPS-SEQL 125 (213)
T ss_dssp GGGCSEEEEEECSSSSCEECCCEEEEECCC---------------------------------CBCCEEEEECCC-HHHH
T ss_pred cccCEEEEEecccCCceEEcCCceEEEecc---------------------------------CCCceeeeeCCC-ceec
Confidence 99999999999998653 223355666321 124666655443 3456
Q ss_pred CCceEEEEEEEeeCCCC--CeEEEEEECCEEccCCC--cEEEEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcce
Q psy2145 650 EGQSAHYDCRVVPVGDP--TMRFEWFVNGVELKMGS--RFHVQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGEA 720 (808)
Q Consensus 650 ~G~~v~l~C~v~~~g~P--~p~i~W~~~g~~l~~~~--~~~~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 720 (808)
+|+.++|.|.+ .|.| .+.|.|+|||..+..+. ...... ..+ .+.|.|.....+|+|.|+|.|+|.....
T Consensus 126 ~~~~v~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~~ 203 (213)
T 3r06_A 126 GTGSATLVCFV--NNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTSTA 203 (213)
T ss_dssp TTTEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSS
T ss_pred CCCCcEEEEEE--eeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccCc
Confidence 78899999999 5544 45999999999987541 111111 111 2468888888899999999999997544
Q ss_pred E
Q psy2145 721 V 721 (808)
Q Consensus 721 ~ 721 (808)
.
T Consensus 204 ~ 204 (213)
T 3r06_A 204 A 204 (213)
T ss_dssp C
T ss_pred c
Confidence 3
No 230
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=1.9e-19 Score=181.26 Aligned_cols=175 Identities=20% Similarity=0.302 Sum_probs=126.4
Q ss_pred eeecCCCcccccCCCceEEEEEEeeCCCC----CcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEEC
Q psy2145 506 FTKPLQNIDAVEEGKNAHFSCRLIPVGDP----TLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLS 567 (808)
Q Consensus 506 f~~~~~~~~~v~~G~~v~l~C~v~~~g~P----~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~ 567 (808)
+...+.++ .+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+ ....|+.+...++..+|.|.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (240)
T 1moe_A 4 LTQSPASL-AVSLGQRATMSCRA--GESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIID 80 (240)
T ss_dssp EEEECSEE-EECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred eEeeCCeE-EecCCCCEEEEEeC--CCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEc
Confidence 33344444 68999999999999 7888 7889999962 211 12457777777777899999
Q ss_pred CCCCCCCEEEEEEEEeCCee-EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 568 HVRAEDEGIYICKATNALGE-AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 568 ~v~~~D~G~Y~C~a~N~~G~-~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+++.+|+|.|+|.|.|..+. ....+.|.|...+... .++.+...+ ...
T Consensus 81 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~------------------------------~~~~~~~~~-~~~ 129 (240)
T 1moe_A 81 PVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGG------------------------------GGEVQLQQS-GAE 129 (240)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCC------------------------------CCCCEEEEC-CCE
T ss_pred CCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCC------------------------------CceEEEeCC-Cce
Confidence 99999999999999998664 3344667776532100 012233332 335
Q ss_pred cccCCceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc-----------------CCCcEEEEEe--CCEEEEEEccCCC
Q psy2145 647 EIMEGQSAHYDCRVVPVGDP--TMRFEWFVN--GVELK-----------------MGSRFHVQHD--FGYVTLDITKCVP 703 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 703 (808)
.+.+|++++|.|.+ .|.| .+.|.|+|+ |..+. ...++.+..+ ....+|.|.++..
T Consensus 130 ~v~~G~~v~L~C~~--~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 207 (240)
T 1moe_A 130 LVEPGASVKLSCTA--SGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTS 207 (240)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEeCCCcEEEEEEE--cCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCH
Confidence 68899999999999 6877 469999996 33221 2357777655 4567999999999
Q ss_pred CCcEEEEEEEEeC
Q psy2145 704 ADSGVYMCKAINR 716 (808)
Q Consensus 704 ~D~G~Y~C~A~N~ 716 (808)
+|+|.|+|.|.+.
T Consensus 208 ~D~G~Y~C~a~~~ 220 (240)
T 1moe_A 208 EDTAVYYCAPFGY 220 (240)
T ss_dssp GGCEEEEEEECST
T ss_pred HHCEEEEEEEEec
Confidence 9999999999953
No 231
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.82 E-value=2.3e-19 Score=173.76 Aligned_cols=162 Identities=16% Similarity=0.174 Sum_probs=116.2
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee---cc---------------CcEEEEeeCCeEEEEEcccC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT---IG---------------HRFRPIHDFGYVALDIIDTI 116 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~---~~---------------~r~~~~~~~~~~~L~I~~~~ 116 (808)
.|..+ .+.+|++|+|.|.+.+ +.+.+.|.|+|+|..|. .+ .|+.+. ...+|.|.+++
T Consensus 4 ~p~~v-~~~~G~~v~L~C~~~~-~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~ 78 (193)
T 2if7_A 4 TPLMV-NGILGESVTLPLEFPA-GEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLK 78 (193)
T ss_dssp CCEEE-EEETTSCEEECCCCCC-CSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCC
T ss_pred CCeEE-EEEecCeEEEeccCCC-cccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCC
Confidence 45666 8899999999999974 24556999999987653 11 244433 23479999999
Q ss_pred cCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeec
Q psy2145 117 PEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIK 196 (808)
Q Consensus 117 ~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~ 196 (808)
.+|+|.|+|.|.|..|.....+.|.|.... ..|.+.... ..+.
T Consensus 79 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~-----------------------------------~~p~i~~~~--~~~~ 121 (193)
T 2if7_A 79 MEDTGSYRAQISTKTSAKLSSYTLRILRQL-----------------------------------RNIQVTNHS--QLFQ 121 (193)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEECCC-----------------------------------EEEEEEECC--C---
T ss_pred cccCceEEEEEEecCCCeEEEEEEEEEccC-----------------------------------CCCeEecCc--eeec
Confidence 999999999999998877777888886421 124444333 2234
Q ss_pred CCC-eEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCC-CCcEEEEEEEEeCceeEEEE
Q psy2145 197 EGQ-RAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLP-EDSGVYTCRAVNALGQAVTS 270 (808)
Q Consensus 197 ~G~-~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~-~D~G~Y~C~a~n~~g~~~~~ 270 (808)
.|. +++|.|.+.+ ..|.+.|.|+++|..+..+. .|.|..... +|+|.|+|.|.|..|..+..
T Consensus 122 ~g~~~v~L~C~~~g-~~p~p~i~W~~~g~~l~~~~-----------~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 122 NMTCELHLTCSVED-ADDNVSFRWEALGNTLSSQP-----------NLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp CSSEEEEEEEEEES-CCTTCEEEEEETTEEEESSS-----------EEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred CCCceEEEEEEEec-CCCceEEEEEeCCEEcCCCC-----------eEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 565 8999999952 35688999999998875432 455654444 48999999999999987543
No 232
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.82 E-value=3.2e-19 Score=179.24 Aligned_cols=184 Identities=18% Similarity=0.277 Sum_probs=130.9
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--E------------ecCCCCCeEEEeeCcEEEEEECCC
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--K------------PLEDSSRITTKHDFGYVAMDLSHV 569 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~------------~l~~~~~~~~~~~~~~~~L~I~~v 569 (808)
+.+...+..+ .+.+|+++.|.|.+ .+.|.+.+.|+|++ . ......++......+..+|.|.++
T Consensus 25 ~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 101 (237)
T 3sob_L 25 IQMTQSPSSL-SASVGDRVTITCRA--SQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSL 101 (237)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred ceEEeCCCeE-EEeCCCcEEEEEec--CCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCC
Confidence 4455544444 68999999999999 78889999999842 1 112246777777777789999999
Q ss_pred CCCCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccc
Q psy2145 570 RAEDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEI 648 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 648 (808)
+.+|+|.|+|.|.|..+.. .....|.|...+ .+|.+...... ..+
T Consensus 102 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~p~v~~~~~~-~~~ 147 (237)
T 3sob_L 102 QPEDFATYYCQQSYTTPPTFGQGTKVEIKRTV---------------------------------AAPSVFIFPPS-DEQ 147 (237)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEECCC---------------------------------BCCEEEEECCC-HHH
T ss_pred ChhhCeEEEEeeccCCceEEcCcEEEEEecCC---------------------------------CCCceEEeCCC-hhh
Confidence 9999999999999977632 233466665421 24666654443 345
Q ss_pred cCCceEEEEEEEeeCC-CC-CeEEEEEECCEEccCCC--cEEEEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 649 MEGQSAHYDCRVVPVG-DP-TMRFEWFVNGVELKMGS--RFHVQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 649 ~~G~~v~l~C~v~~~g-~P-~p~i~W~~~g~~l~~~~--~~~~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.+|+.++|.|.+ .| .| .+.|.|+|||..+..+. ...... .++ .+.|.|..+..+|+|.|+|.|+|....
T Consensus 148 ~~g~~v~l~C~~--~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 225 (237)
T 3sob_L 148 LKSGTASVVCLL--NNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLS 225 (237)
T ss_dssp HHHTEEEEEEEE--EEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCS
T ss_pred ccCCceEEEEEE--cccCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCC
Confidence 579999999999 45 45 68999999999987531 101000 111 347999999999999999999999876
Q ss_pred eEEEEEE
Q psy2145 720 AVSSTSL 726 (808)
Q Consensus 720 ~~~s~~l 726 (808)
...+..+
T Consensus 226 ~~~~~~~ 232 (237)
T 3sob_L 226 SPVTKSF 232 (237)
T ss_dssp SCEEEEE
T ss_pred Cceeeee
Confidence 5444433
No 233
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=4.8e-19 Score=182.93 Aligned_cols=198 Identities=16% Similarity=0.242 Sum_probs=135.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EEe---e--------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RPV---T--------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~l---~--------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+.+.|.|||++ ..+ . ...|+.+..+ .+..+|.
T Consensus 30 ~~~p~~~-~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 108 (282)
T 1qok_A 30 LQQSGAE-LVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQ 108 (282)
T ss_dssp EEECCCE-EEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEE
T ss_pred EECCCCE-EEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEE
Confidence 4567777 899999999999998421136789999953 211 1 1357776653 3567999
Q ss_pred EcccCcCCCeeEEEEEEecCcc---e--EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGF---A--EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~---~--~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
|.+++.+|+|.|.|.|.|..|. . ...+.|.|...+...... . . .....+|.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~--------------------~--~-~~~~~~~~~ 165 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGG--------------------G--S-GGGGSENVL 165 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC--------------------------------------CCCE
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCc--------------------c--C-CCCccceEE
Confidence 9999999999999999998761 1 133467776432100000 0 0 000235667
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCeEEEEee--CCEEcc------------CCCceEEEecCceEEEEEccCCCCC
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH--NNVPIK------------SGSRFTETNNFGFVALDIMQCLPED 252 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~~~~~D 252 (808)
...+..+.+.+|++|+|.|.+ .+.+ +.+.||| +|..+. ...++......+..+|.|.+++.+|
T Consensus 166 ~~~p~~~~v~~G~~v~L~C~~--~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 242 (282)
T 1qok_A 166 TQSPAIMSASPGEKVTITCSA--SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAED 242 (282)
T ss_dssp EEECSEEEECTTCCEEEEEEE--SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred ecCCCEEEEcCCCcEEEEEEe--cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhH
Confidence 777888889999999999999 5666 7999999 666542 1356665555566689999999999
Q ss_pred cEEEEEEEEeCceeE-EEEEEEEEee
Q psy2145 253 SGVYTCRAVNALGQA-VTSGNLLVHS 277 (808)
Q Consensus 253 ~G~Y~C~a~n~~g~~-~~~~~l~V~~ 277 (808)
+|.|+|.|.|..+.. ...+.|.|..
T Consensus 243 sG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 243 AATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEEeeCCCceEeCCEEEEEec
Confidence 999999999854322 2346777764
No 234
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.82 E-value=2.5e-19 Score=182.36 Aligned_cols=201 Identities=17% Similarity=0.220 Sum_probs=136.3
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEE---e--------------eccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRP---V--------------TIGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~---l--------------~~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+.+.|.|||. +.. + ....|+.+..+ .+.++|.
T Consensus 6 v~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 84 (256)
T 3umt_A 6 LQQSGLE-LVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLE 84 (256)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEE
T ss_pred EEccCce-EEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEE
Confidence 4455666 79999999999999842222679999983 221 1 02357776654 3567899
Q ss_pred EcccCcCCCeeEEEEEEec----CcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 112 IIDTIPEDSGTYTCRAVNL----VGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
|.+++.+|+|.|.|.|.|. .+.....+.|.|.....-... .........+|.+.
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~----------------------~~~~~~~~~~~~~~ 142 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGG----------------------GGSGGGGSTDIQLT 142 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC-------------------------------------CCCCEE
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccC----------------------cccCCCCccccEEE
Confidence 9999999999999999987 333344566777532100000 00000012367888
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEcc------------CCCceEEEecCceEEEEEccCCCCCc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPIK------------SGSRFTETNNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~~~~~D~ 253 (808)
..+..+.+.+|++|+|.|.+ .+.+.+.+.|||+ +..+. ...++.........+|.|.+++.+|+
T Consensus 143 ~~p~~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 220 (256)
T 3umt_A 143 QSPSSLSASLGERVSITCRA--SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDF 220 (256)
T ss_dssp EECSEEEECTTCCEEEEEEE--SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred cCCCeEEEECCCCEEEEEEE--ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHC
Confidence 88888999999999999999 5677779999994 32221 13566666666677899999999999
Q ss_pred EEEEEEEEeCceeEE-EEEEEEEeeC
Q psy2145 254 GVYTCRAVNALGQAV-TSGNLLVHSK 278 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~-~~~~l~V~~~ 278 (808)
|.|+|.|.|..+... .-+.|.|...
T Consensus 221 G~Y~C~~~~~~~~~fg~gt~L~V~~~ 246 (256)
T 3umt_A 221 VDYYCLQYASSPPTFGGGTKLEIKRA 246 (256)
T ss_dssp SEEEEEECSSSSCEECCCEEEEEC--
T ss_pred EEEEEEEeeCCCcEECCCEEEEEECC
Confidence 999999998654333 2467888753
No 235
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.82 E-value=7.5e-20 Score=181.44 Aligned_cols=175 Identities=15% Similarity=0.252 Sum_probs=121.0
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEecC-----------------CCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPLE-----------------DSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++++|.|.+ .+.| .+.|.|+|+ |..+. ...|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (219)
T 1c1e_H 11 LKKPGETVKISCKA--SGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKN 88 (219)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCG
T ss_pred EecCCCcEEEEEEE--eCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCc
Confidence 58899999999999 5655 788999997 43321 1356666543 3456899999999
Q ss_pred CCCEEEEEEEEeCCee----EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 572 EDEGIYICKATNALGE----AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~----~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
+|+|.|.|.|.|..|. ....+.|.|...+. .+|.+...... ..
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~i~~~~~~-~~ 135 (219)
T 1c1e_H 89 EDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKT--------------------------------TPPSVYPLAPG-SA 135 (219)
T ss_dssp GGCEEEEEEEEETTTTEEEEECCCEEEEECCCCC--------------------------------BCCEEEEECCC-SS
T ss_pred ccCEEEEEEEeccCcccceeecCceEEEEecCCC--------------------------------CCCeEEEecCc-cc
Confidence 9999999999998732 22345666654211 23555544332 35
Q ss_pred ccCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEEEeCC---EEEEEEccCCCCCcEEEEEEEEeCCcceEE
Q psy2145 648 IMEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHVQHDFG---YVTLDITKCVPADSGVYMCKAINRAGEAVS 722 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 722 (808)
+.+|+.++|.|.+ .| .|.| .|.|+|||..+.......+...+. .+.|.|. ....|.|.|+|.|.|..|....
T Consensus 136 ~~~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~-~~~~d~g~Y~C~a~n~~~~~~~ 212 (219)
T 1c1e_H 136 AQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVP-SSPRPSETVTCNVAHPASSTKV 212 (219)
T ss_dssp SCCSSEEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEE-SSSTTTSCCEEEEEEGGGTEEE
T ss_pred cccCCeEEEEEEc--ccccCCCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEe-cccCCCCEEEEEEEeCCCCccE
Confidence 7789999999999 67 8998 999999998753110000001111 2468884 4444679999999999998776
Q ss_pred EEEEE
Q psy2145 723 STSLK 727 (808)
Q Consensus 723 s~~l~ 727 (808)
...|.
T Consensus 213 ~~~i~ 217 (219)
T 1c1e_H 213 DKKIV 217 (219)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 66554
No 236
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.82 E-value=3.9e-19 Score=183.01 Aligned_cols=198 Identities=16% Similarity=0.232 Sum_probs=133.0
Q ss_pred eeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC-----EEee---------ccCcEEEEeeCCeEEEEEcccC
Q psy2145 51 YTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG-----RPVT---------IGHRFRPIHDFGYVALDIIDTI 116 (808)
Q Consensus 51 ~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g-----~~l~---------~~~r~~~~~~~~~~~L~I~~~~ 116 (808)
.+...|..+ .+.+|++|+|.|.+. +.|.+.|.|||++ ..+. ...|+.+..+++..+|.|.+++
T Consensus 14 ~v~~~p~~~-~v~~G~~v~L~C~~~--~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 14 QMTQSPSSL-SASVGDRVTITCRAS--QDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp CEEEECSEE-ECCTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEEeCCCeE-EEcCCCCEEEEeEcC--CCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 344567777 899999999999998 4677899999954 2222 1457887777778899999999
Q ss_pred cCCCeeEEEEEEecCcc-eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceee
Q psy2145 117 PEDSGTYTCRAVNLVGF-AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEI 195 (808)
Q Consensus 117 ~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v 195 (808)
.+|+|.|+|.|.|..+. ....+.|.|...+...... ......++.+...+....+
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~------------------------~~~~~~p~~~~~~p~~~~v 146 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEG------------------------RSGGGGSEVQLVESGGGLV 146 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------------------------------CCEEEEECCEEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccc------------------------cccccCcceEEECCCceEe
Confidence 99999999999987554 2233566665332100000 0000123344555678889
Q ss_pred cCCCeEEEEEEEeecCCC--CeEEEEeeCC--EEc-----------------cCCCceEEEec--CceEEEEEccCCCCC
Q psy2145 196 KEGQRAHFECRLIPVSDN--TMKVEWFHNN--VPI-----------------KSGSRFTETNN--FGFVALDIMQCLPED 252 (808)
Q Consensus 196 ~~G~~v~L~C~~~~~~~p--~~~v~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~I~~~~~~D 252 (808)
.+|++++|.|.+. +.+ .+.|.|||++ ..+ ....++.+..+ .+..+|.|.+++.+|
T Consensus 147 ~~G~~v~L~C~~~--g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 224 (276)
T 3auv_A 147 QPGGSLRLSCAAS--GFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAED 224 (276)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEec--CccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhH
Confidence 9999999999994 444 5899999963 221 11346655543 355689999999999
Q ss_pred cEEEEEEEEeCc---eeE--EEEEEEEEee
Q psy2145 253 SGVYTCRAVNAL---GQA--VTSGNLLVHS 277 (808)
Q Consensus 253 ~G~Y~C~a~n~~---g~~--~~~~~l~V~~ 277 (808)
+|.|+|.|.|.. +.. ...+.|.|..
T Consensus 225 sG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~ 254 (276)
T 3auv_A 225 TAVYYCARFVFFLPYAMDYWGQGTLVTVSS 254 (276)
T ss_dssp CEEEEEEEECSSTTCSCCCBCCCEEEEEC-
T ss_pred CEEEEEEEEcCcCCcCceEECCCEEEEEcc
Confidence 999999999973 221 1235777754
No 237
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.81 E-value=1e-19 Score=180.09 Aligned_cols=177 Identities=19% Similarity=0.202 Sum_probs=125.7
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCC-CCceEEEEeCC--EEee------------ccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTD-SNLKVEWFKNG--RPVT------------IGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~-p~~~v~W~~~g--~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
..|.++ .+.+|++++|.|.+.. +. +.+.|.|||++ ..+. ...|+....+.+..+|.|.+++.+
T Consensus 5 ~qp~~~-~v~~G~~v~L~C~v~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 82 (216)
T 2xzc_L 5 TQPPSV-SAAPGQKVTISCSGSS-SNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTG 82 (216)
T ss_dssp BCCSEE-EECTTCCEEEEEECCT-TTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ECCCcE-EecCCCeEEEEEEeec-CCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcc
Confidence 347777 8999999999999643 23 35799999943 2221 135777777777889999999999
Q ss_pred CCeeEEEEEEecCc--ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeec
Q psy2145 119 DSGTYTCRAVNLVG--FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIK 196 (808)
Q Consensus 119 D~G~Y~C~a~n~~g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~ 196 (808)
|+|.|+|.|.|..+ .....+.|.|... ..+|.+...+....+.
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~P~v~~~~~~~~~~ 127 (216)
T 2xzc_L 83 DEADYYCGTWDSSLNPVFGGGTKLEIKRT-----------------------------------VAAPSVFIFPPSDEQL 127 (216)
T ss_dssp GCEEEEEEEECTTSCEEEBCCEEEEECCC-----------------------------------CBCCEEEEECCCHHHH
T ss_pred cCEEEEEEEEeCCCcceECCCEEEEEcCC-----------------------------------CCCCceEEeCCChhhc
Confidence 99999999999876 1223345666321 3467777655444445
Q ss_pred CCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE--EE-ecCce----EEEEEccCCCCCcEEEEEEEEeCceeEE
Q psy2145 197 EGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT--ET-NNFGF----VALDIMQCLPEDSGVYTCRAVNALGQAV 268 (808)
Q Consensus 197 ~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~--~~-~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 268 (808)
+|+.++|.|.+.+ ..|. ..|.|+|||.++..+.... .. ..++. ..|.|..+..+|+|.|+|.|.|......
T Consensus 128 ~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 128 KSGTASVVCLLNN-FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp HTTEEEEEEEEEE-EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cCCcEEEEEEEEe-EcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 7999999999964 2455 4999999999987651111 11 12222 2799999999999999999999765433
No 238
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.81 E-value=6.6e-20 Score=181.26 Aligned_cols=188 Identities=19% Similarity=0.260 Sum_probs=141.1
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCC--CCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDS--SRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
.+|.|. .+.++ .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..|..+ .++.+....+...|.|.++..+|+|.|+|
T Consensus 18 ~~P~~~-~p~~~-~~~~G~~v~l~C~~--~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 93 (215)
T 3mtr_A 18 YAPKLQ-GPVAV-YTWEGNQVNITCEV--FAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNC 93 (215)
T ss_dssp EEEEEE-CCSEE-EECTTCCEEEEEEE--EEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEE
T ss_pred cCCccc-CCceE-EEECCCCEEEEEEE--eecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEE
Confidence 477885 34443 68999999999999 79999999999999999876 56777766667799999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 580 KATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|.|..|.....+.|.|...|. +|..... ...+..+.|.|.
T Consensus 94 ~a~n~~g~~~~~~~l~v~~~P~---------------------------------~p~~~~~------~~~~~~~~l~w~ 134 (215)
T 3mtr_A 94 TAVNRIGQESLEFILVQADTPS---------------------------------SPSIDQV------EPYSSTAQVQFD 134 (215)
T ss_dssp EEECSSCEEEEEEEEEECCCCC---------------------------------CCEEEEE------EEETTEEEEEEE
T ss_pred EEEECCCceEEEEEEEECCCCC---------------------------------CCcceEE------EEecceEEEEEe
Confidence 9999999999999998876543 2332221 124677899997
Q ss_pred Eee--CCCCCe--EEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 660 VVP--VGDPTM--RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 660 v~~--~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
... .|.|.+ .|.|+++|........+.+........|.|.++.+.|.|.|+|.|.|.+|....+..+.|..+|
T Consensus 135 ~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 135 EPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp CCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred cCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 311 244544 5889998864321111111110111379999999999999999999999999988888888765
No 239
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.81 E-value=1.4e-19 Score=178.56 Aligned_cols=176 Identities=16% Similarity=0.276 Sum_probs=128.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC---EE--ee---------ccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG---RP--VT---------IGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g---~~--l~---------~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
...|..+ .+.+|++++|.|.+.+ .|.+.|.|||.+ .+ +. ...|+......+..+|.|.+++.+
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 5 TQSPSSL-PASLGDRVTINCQASQ--DISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp EEECSEE-EECTTCCEEEEEEESS--CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeCCCEE-EecCCCcEEEEEEeCC--CcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 3446777 8999999999999994 578899999832 11 11 245787777778889999999999
Q ss_pred CCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 119 DSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|+|.|+|.|.|..+.. ...+.|.|... ..+|.+...+....+..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~v~~~~~~~~~~~ 126 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRA-----------------------------------DAKPTVSIFPPSSEQLG 126 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCC-----------------------------------CBCCEEEEECCCHHHHT
T ss_pred cCEEEEEecccCCceEEcCCceEEEecc-----------------------------------CCCceeeeeCCCceecC
Confidence 9999999999875432 33455666321 45788888777777778
Q ss_pred CCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC--ceEE-EecCc----eEEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 198 GQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS--RFTE-TNNFG----FVALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~--~~~~-~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
|+.++|.|.+.+...+.+.|.|+|||..+..+. .... ....| ...|.|.....+|+|.|+|.|.|....
T Consensus 127 ~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 127 TGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp TTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred CCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 999999999964332356999999999987542 1111 11122 135888888889999999999997543
No 240
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=2.8e-19 Score=180.10 Aligned_cols=173 Identities=18% Similarity=0.287 Sum_probs=127.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC----CceEEEEeC--CEE---ee---------ccCcEEEEeeCCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS----NLKVEWFKN--GRP---VT---------IGHRFRPIHDFGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p----~~~v~W~~~--g~~---l~---------~~~r~~~~~~~~~~~L~I~~ 114 (808)
...|..+ .+.+|++|+|.|.+.+ .| .+.|.|||+ |.. +. ...|+.+..+++.++|.|.+
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (240)
T 1moe_A 5 TQSPASL-AVSLGQRATMSCRAGE--SVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDP 81 (240)
T ss_dssp EEECSEE-EECTTSCEEEEEEESS--CCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EeeCCeE-EecCCCCEEEEEeCCC--ccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcC
Confidence 4456777 8999999999999984 55 789999995 221 11 13578877777788999999
Q ss_pred cCcCCCeeEEEEEEecCcc-eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCce
Q psy2145 115 TIPEDSGTYTCRAVNLVGF-AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNC 193 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~ 193 (808)
++.+|+|.|+|.|.|..+. ....+.|.|..... ...++.+...+...
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~--------------------------------~~~~~~~~~~~~~~ 129 (240)
T 1moe_A 82 VEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGS--------------------------------GGGGEVQLQQSGAE 129 (240)
T ss_dssp CCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSC--------------------------------CCCCCCEEEECCCE
T ss_pred CChhhCEEEEEEEccCCceeecCCEEEEEecCCC--------------------------------CCCceEEEeCCCce
Confidence 9999999999999998654 33456777754221 01234455667778
Q ss_pred eecCCCeEEEEEEEeecCCC--CeEEEEeeC--CEEcc-----------------CCCceEEEec--CceEEEEEccCCC
Q psy2145 194 EIKEGQRAHFECRLIPVSDN--TMKVEWFHN--NVPIK-----------------SGSRFTETNN--FGFVALDIMQCLP 250 (808)
Q Consensus 194 ~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~~~~ 250 (808)
.+.+|++++|.|.+. +.| .+.|.|+|+ |..+. ...++.+..+ .+..+|.|.+++.
T Consensus 130 ~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 207 (240)
T 1moe_A 130 LVEPGASVKLSCTAS--GFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTS 207 (240)
T ss_dssp EECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEeCCCcEEEEEEEc--CccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCH
Confidence 899999999999994 554 469999995 33221 1235555432 4556899999999
Q ss_pred CCcEEEEEEEEe
Q psy2145 251 EDSGVYTCRAVN 262 (808)
Q Consensus 251 ~D~G~Y~C~a~n 262 (808)
+|+|.|+|.|.+
T Consensus 208 ~D~G~Y~C~a~~ 219 (240)
T 1moe_A 208 EDTAVYYCAPFG 219 (240)
T ss_dssp GGCEEEEEEECS
T ss_pred HHCEEEEEEEEe
Confidence 999999999985
No 241
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.81 E-value=2.1e-20 Score=179.93 Aligned_cols=162 Identities=14% Similarity=0.229 Sum_probs=111.4
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcc-cCcCCCeeEEEEEEecCcceEEEEE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIID-TIPEDSGTYTCRAVNLVGFAEVQAT 139 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~-~~~~D~G~Y~C~a~n~~g~~~~~~~ 139 (808)
.+.+|++++|.|.+.+ +. .|.|+|||..|..+. ++ +|.|.+ ++.+|+|.|+|.|.|..|.......
T Consensus 10 v~~~G~~v~L~C~~~~---~~-~i~W~k~g~~l~~~~-------~~--~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 76 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS---DE-NLKWEKNGQELPQKH-------DK--HLVLQDFSEVEDSGYYVCYTPASNKNTYLYLK 76 (186)
T ss_dssp EEEETTEEEEECSSCC---CT-TCEEEETTEEECSCC-------CS--EEEEESCCTTTSCEEEEEECSSCCCCCCEEEC
T ss_pred EEeCCcEEEEEEeCCC---CC-ceEEEECCEECCCCC-------CC--EEEECCCCccccCEEEEEEEEeCCCcEEEEEE
Confidence 3468999999999973 33 499999999987641 11 699999 9999999999999999988666666
Q ss_pred EEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe----ecC---ceeecCCCeEEEEEEEeecCC
Q psy2145 140 LQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT----SLK---NCEIKEGQRAHFECRLIPVSD 212 (808)
Q Consensus 140 l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~----~~~---~~~v~~G~~v~L~C~~~~~~~ 212 (808)
+.|............ + .......+|.+.. ... ...+.+|+++.|.|.+
T Consensus 77 ~~v~~~~~~~~~~~~------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~----- 131 (186)
T 1jbj_A 77 ARVGSADDAKKDAAK------K--------------DDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL----- 131 (186)
T ss_dssp CCCCSCCCCCCCCCC------C--------------CCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS-----
T ss_pred EEEeccccccccccc------c--------------cccccCCccccccccccccccccceecCCCCeEEEEeeC-----
Confidence 655432211000000 0 0000001111110 000 1235599999999976
Q ss_pred CCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeE
Q psy2145 213 NTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQA 267 (808)
Q Consensus 213 p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 267 (808)
|.+.|.|+|||..+..... ..+ +|.|.++..+|+|.|+|.|.|..|..
T Consensus 132 p~p~i~W~k~g~~i~~~~~-----~~~--~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 132 TDKTIKWLKDGSIISPLNA-----TKN--TWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SCSCEEEEETTEECCCSSC-----CSS--CCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred CCCeEEEEECCEECcccCC-----Ccc--eEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 5679999999999875432 112 79999999999999999999998876
No 242
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.81 E-value=1.3e-20 Score=184.11 Aligned_cols=185 Identities=15% Similarity=0.233 Sum_probs=109.9
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTASM 594 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l 594 (808)
.+.+|++++|.|.+ |.+.|+|+|||..+... .... .+|.|.+++.+|+|.|+|.+.|.. +. .+.|
T Consensus 14 ~~~~G~~v~L~C~~-----p~~~i~W~k~g~~l~~~-----~~~~--~~L~i~~v~~~DsG~Y~C~~~~~~-s~--~~~v 78 (204)
T 1sy6_A 14 DYQEDGSVLLTCDA-----EAKNITWFKDGKMIGFL-----TEDK--KKWNLGSNAKDPRGMYQCKGSQNK-SK--PLQV 78 (204)
T ss_dssp CCCSSSEEEEEECS-----CSSEEEEEETTEEEEEE-----ESSC--CCEEEEEGGGCCEEEEEEESSSSC-CC--CEEE
T ss_pred eecCCCeEEEEEcC-----CCCEEEEEECCEECCCC-----CCCC--CeEEeCCCCcCCCEEEEEEecCCC-Ce--eEEE
Confidence 35789999999964 78899999999988532 0112 269999999999999999976542 22 2444
Q ss_pred EEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc-CCceEEEEEEEeeCCCCCeEEEEE
Q psy2145 595 KIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM-EGQSAHYDCRVVPVGDPTMRFEWF 673 (808)
Q Consensus 595 ~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~-~G~~v~l~C~v~~~g~P~p~i~W~ 673 (808)
.|........... ............. . .........|.+... +..+. +|++++|.|. |.|.|.|.|+
T Consensus 79 ~v~~~~~~~~~~~--~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~---p~~v~~~G~~v~L~C~----g~p~p~i~W~ 146 (204)
T 1sy6_A 79 YYRMGSADDAKKD--AAKKDDAKKDDAK--K-DGSDGNEEMGGITQT---PYKVSISGTTVILTCP----QYPGSEILWQ 146 (204)
T ss_dssp EEEC-----------------------------------------CC---CCEEEEETTEEEEECS----CCCSSCEEEE
T ss_pred EEEEecccccccc--ccccccccccccc--c-ccccccccccceecC---CceeeecCCcEEEEcC----CCCCCceEEE
Confidence 4431110000000 0000000000000 0 000000011222211 12344 8999999994 7899999999
Q ss_pred ECCEEccCCC-cEEEEEeCCEEEEEEccC-CCCCcEEEEEEEEeCCcce-EEEEEEEE
Q psy2145 674 VNGVELKMGS-RFHVQHDFGYVTLDITKC-VPADSGVYMCKAINRAGEA-VSSTSLKV 728 (808)
Q Consensus 674 ~~g~~l~~~~-~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~A~N~~G~~-~~s~~l~V 728 (808)
|||..+.... +..+....+ +|.|.++ ..+|+|.|+|.|.|..|.. +....|.|
T Consensus 147 k~~~~l~~~~~~~~~~~~~~--~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 147 HNDKNIGGDEDDKNIGSDED--HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp ETTEEESCCTTCTTEEEETT--EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred ECCEECCCccCCceEecCCC--EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 9999987542 222222344 8999999 9999999999999999973 45555554
No 243
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.81 E-value=8.8e-19 Score=177.26 Aligned_cols=194 Identities=15% Similarity=0.191 Sum_probs=133.7
Q ss_pred ecCceeecCCCeEEEEEEEeecCCC--CeEEEEeeCC--EEc-----------------cCCCceEEEec--CceEEEEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHNN--VPI-----------------KSGSRFTETNN--FGFVALDI 245 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~g--~~l-----------------~~~~~~~~~~~--~~~~~L~I 245 (808)
.+..+.+.+|++|+|.|.+. +.| .+.|.|+|++ ..+ ....++.+..+ .+..+|.|
T Consensus 8 ~p~~~~v~~G~~v~L~C~~~--g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 85 (247)
T 2ghw_B 8 QSGGGVVQPGKSLRLSCAAS--GFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQM 85 (247)
T ss_dssp EECCEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred ecCCEEEecCCcEEEEEEec--cccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEE
Confidence 34568899999999999994 555 6789999942 111 12346665543 45678999
Q ss_pred ccCCCCCcEEEEEEEEeCcee--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCC
Q psy2145 246 MQCLPEDSGVYTCRAVNALGQ--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMR 323 (808)
Q Consensus 246 ~~~~~~D~G~Y~C~a~n~~g~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~ 323 (808)
.+++.+|+|.|+|.|.|..+. ....+.|.|...+.... . . .......++.+...+.
T Consensus 86 ~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~--~--~------------------~~~~~~~~~~~~~~~~ 143 (247)
T 2ghw_B 86 NSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSG--G--G------------------GSGGGGSETTLTQSPA 143 (247)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC----------------------------------CCCCEEEECS
T ss_pred CcCCHHHCEEEEEeeeccCCccccCCceEEEEeccccccc--c--c------------------ccCCCCcceEEEccCC
Confidence 999999999999999997433 23345777764321000 0 0 0000112455666666
Q ss_pred ceEeecCCeEEEEEEEeecCCCccEEEEEE--CCEecc------------CCCcEEEEeeCcEEEEEEccCCCCCCeEEE
Q psy2145 324 DIHVAENQAAHFEARLIPVGDSKLKVTWLR--NGVPIQ------------ASNRVSTMHDFGYVALNFKYTYPEDSGTYT 389 (808)
Q Consensus 324 ~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~ 389 (808)
...+.+|+.++|.|.+ .+.|.+.|.|+| +|..+. ...++.+..++...+|.|.++..+|+|.|+
T Consensus 144 ~~~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 221 (247)
T 2ghw_B 144 TLSLSPGERATLSCRA--SQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYY 221 (247)
T ss_dssp EEEECTTSCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEE
T ss_pred EEEecCCCcEEEEEEe--CCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEE
Confidence 7788999999999999 788888999999 665431 235666655566678999999999999999
Q ss_pred EEEEcCCcceEE-EEEEEEE
Q psy2145 390 CRAVNELGEAVT-SSTLFVE 408 (808)
Q Consensus 390 C~a~n~~g~~~~-~~~l~V~ 408 (808)
|.|.|..+.... .+.|.|.
T Consensus 222 C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 222 CQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp EEECSSSSCEECCCEEEEEC
T ss_pred EEEccCCCceEcCCEEEEEC
Confidence 999986443332 3566665
No 244
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.81 E-value=2.8e-19 Score=179.87 Aligned_cols=180 Identities=19% Similarity=0.337 Sum_probs=121.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEe---------------eccCcEEEEe-eCCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPV---------------TIGHRFRPIH-DFGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l---------------~~~~r~~~~~-~~~~~~L~I~~ 114 (808)
...|..+ .+.+|++|+|.|. . +.|.+.|.|||+ +..+ ....|+.+.. +.+..+|.|.+
T Consensus 4 ~q~p~~~-~v~~G~~v~L~C~-~--~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 79 (238)
T 2p1y_A 4 TQSPRNK-VAVTGGKVTLSCN-Q--TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILEL 79 (238)
T ss_dssp EEECSEE-EEETTCCEEEEEE-E--CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESS
T ss_pred eECccce-EEeCCCEEEEEee-c--CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEec
Confidence 3456777 8999999999999 4 467889999995 2211 1134666654 33456899999
Q ss_pred cCcCCCeeEEEEEEecCcce-----EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 115 TIPEDSGTYTCRAVNLVGFA-----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
++.+|+|.|+|.|.|..|.. ...+.|.|........ +......+.+...
T Consensus 80 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~--------------------------p~~~~~~~~v~~~ 133 (238)
T 2p1y_A 80 ATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAK--------------------------KDAAKKDGQVRQS 133 (238)
T ss_dssp CCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHH--------------------------HHHHHHHTCCEEE
T ss_pred CCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCc--------------------------CCcccceeeEEcc
Confidence 99999999999999876531 1234566643211000 0000011256667
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EE---c---------cCCCceEEE--ecCceEEEEEccCCCCCc
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VP---I---------KSGSRFTET--NNFGFVALDIMQCLPEDS 253 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~---l---------~~~~~~~~~--~~~~~~~L~I~~~~~~D~ 253 (808)
+..+.+.+|++++|.|.+ .+.|.+.+.|+|++ .. + ....++... ...+..+|.|.+++.+|+
T Consensus 134 p~~~~v~~G~~v~L~C~~--~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~ 211 (238)
T 2p1y_A 134 PQSLTVWEGETAILNCSY--ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 211 (238)
T ss_dssp CSEEEEETTSCEEEEEEC--CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGC
T ss_pred CceEEEeCCCeEEEEEEE--ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHC
Confidence 778889999999999999 57788899999964 11 1 113455543 234456899999999999
Q ss_pred EEEEEEEEeCc
Q psy2145 254 GVYTCRAVNAL 264 (808)
Q Consensus 254 G~Y~C~a~n~~ 264 (808)
|.|+|.|.|..
T Consensus 212 G~Y~C~a~n~~ 222 (238)
T 2p1y_A 212 ATYFCAAIDTN 222 (238)
T ss_dssp EEEEEEEEETT
T ss_pred EEEEEEEeeCC
Confidence 99999999973
No 245
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=9.3e-20 Score=184.30 Aligned_cols=172 Identities=9% Similarity=0.057 Sum_probs=118.8
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceE-EEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFT-ETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~-~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+. ..+.+|++|+|.|.+ . .+.+.+.|||+|..+....... .........|.|.+++.+|+|.|+|.
T Consensus 5 ~~kP~i~~~P~-~~V~~G~~VtL~C~~--~-~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 5 HRKPSLLAHPG-PLVKSEETVILQCWS--D-VRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp CCCCEECCBSC-SEEESSCCEEEEEEE--S-SCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred CCCCEEEEcCC-CEecCCCCEEEEEec--C-CCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 45677877775 678899999999998 3 3467899999987653211000 00112334899999999999999999
Q ss_pred EEeCce-----eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEE
Q psy2145 260 AVNALG-----QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAH 334 (808)
Q Consensus 260 a~n~~g-----~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~ 334 (808)
+.|..+ ..+..+.|.|... ..+|.+...+. ..+.+|+.++
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~----------------------------------~~~P~l~~~p~-~~V~~G~~vt 125 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGL----------------------------------YEKPSLSAQPG-PTVLAGESVT 125 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECS----------------------------------SCCCEEECSSC-TTCBTTCEEE
T ss_pred EeccCCCccccccCCCEEEecccC----------------------------------CCCcceEccCC-CccCCCCEEE
Confidence 987432 2344567777642 12556554443 3578999999
Q ss_pred EEEEEeecCCCccEEEEEECCEeccCCCcEEEEee-CcEEEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 335 FEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHD-FGYVALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 335 l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
|.|.+ .+. .+.+.|+|+|..+....+...... .....|.|.++. |+|.|+|.|.|..
T Consensus 126 L~C~~--~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~ 183 (257)
T 1b6u_A 126 LSCSS--RSS-YDMYHLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRD 183 (257)
T ss_dssp EEEEC--SSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSS
T ss_pred EEEeC--CCC-CcEEEEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCC
Confidence 99997 554 478999999987754332111111 113479999998 9999999999763
No 246
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=2.6e-19 Score=179.59 Aligned_cols=183 Identities=13% Similarity=0.157 Sum_probs=130.1
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|...+.. .+.+|++|+|.|.+ .+ +...+.|+|+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 6 ~kP~i~~~P~~--~v~~G~~VtL~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 6 PKPFIWAEPHF--MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeeCCC--ccCCCCcEEEEEee--CC-CCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEE
Confidence 46777766655 58999999999997 43 45689999999876421000 001122347999999999999999999
Q ss_pred EeCCeeE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEE
Q psy2145 582 TNALGEA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCR 659 (808)
Q Consensus 582 ~N~~G~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~ 659 (808)
.|..|.. +..+.|.|... +.+|.+..... ..+.+|++++|.|.
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~---------------------------------~~~P~i~~~p~--~~v~~G~~vtL~C~ 124 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEM---------------------------------YDTPTLSVHPG--PEVISGEKVTFYCR 124 (242)
T ss_dssp EETTEECCCCCCEEEEEECC---------------------------------SCCCEEEEESC--SEEETTCEEEEEEE
T ss_pred ecCCccccCCcceEEEeecc---------------------------------cCCCceEccCC--CccCCCCcEEEEEe
Confidence 9976643 34466666542 12466664432 35889999999999
Q ss_pred EeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCC---cceEEEEEEEEEeCC
Q psy2145 660 VVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRA---GEAVSSTSLKVKSKS 732 (808)
Q Consensus 660 v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~---G~~~~s~~l~V~~~p 732 (808)
+ .+. .+.+.|+|||..+.. ..........|.|.+++.+|+|.|+|.|.|.. ...+..+.|.|.+.+
T Consensus 125 ~--~~~-~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 125 L--DTA-TSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp C--TTS-CSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred c--CCC-CCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 8 454 569999999987653 12223456789999999999999999999975 234556788888654
No 247
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.81 E-value=1.4e-18 Score=176.89 Aligned_cols=201 Identities=14% Similarity=0.213 Sum_probs=136.1
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Ee-------------eccCcEEEEee--CCeEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PV-------------TIGHRFRPIHD--FGYVA 109 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l-------------~~~~r~~~~~~--~~~~~ 109 (808)
...+..|..+ .+.+|++|+|.|.+.+...+.+.|.|||.. . .+ ....|+.+..+ .+.++
T Consensus 9 ~v~~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 87 (257)
T 3gkz_A 9 EVQLQESGPS-LVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVY 87 (257)
T ss_dssp CEEEEEECCS-EECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEE
T ss_pred cEEEECCCCe-EEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEE
Confidence 3445667777 799999999999999633457899999932 1 11 12357776654 45678
Q ss_pred EEEcccCcCCCeeEEEEEEecCc----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCe
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVG----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPI 185 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (808)
|.|.+++.+|+|.|+|.|.|..+ .....+.|.|......... .......+|.
T Consensus 88 L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~------------------------~~~~~~~~~~ 143 (257)
T 3gkz_A 88 LQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGG------------------------GSGGGGSQIV 143 (257)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------------------------------CTTCCCCCC
T ss_pred EEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhccc------------------------ccCCCccceE
Confidence 99999999999999999998622 1233456666532110000 0001134567
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeC--CEEcc------------CCCceEEEecCceEEEEEccCCC
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHN--NVPIK------------SGSRFTETNNFGFVALDIMQCLP 250 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~~~~ 250 (808)
+...+....+.+|++|+|.|.+ .+.+.+ .+.|+|+ +..+. ...++......+..+|.|.+++.
T Consensus 144 ~~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 221 (257)
T 3gkz_A 144 LTQSPAIMSASPGEKVTLTCSA--SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA 221 (257)
T ss_dssp EECSCSEEEECTTCCEEEEEEE--SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEcCCceEEEeCCCcEEEEEEE--ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh
Confidence 7777888899999999999999 466666 8999993 33221 12456555555667899999999
Q ss_pred CCcEEEEEEEEeCceeEEE-EEEEEEee
Q psy2145 251 EDSGVYTCRAVNALGQAVT-SGNLLVHS 277 (808)
Q Consensus 251 ~D~G~Y~C~a~n~~g~~~~-~~~l~V~~ 277 (808)
+|+|.|+|.|.|.....-. -..|.|..
T Consensus 222 ~D~G~Y~C~~~~~~~~~fg~gt~l~v~~ 249 (257)
T 3gkz_A 222 EDAASYFCHQWSSFPFTFGSGTKLEIKR 249 (257)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEEEe
Confidence 9999999999885433222 35677764
No 248
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.81 E-value=3.7e-19 Score=175.99 Aligned_cols=173 Identities=16% Similarity=0.219 Sum_probs=121.4
Q ss_pred cccCCCceEEEEEEeeCCCC-CcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP-TLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P-~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
.+.+|++++|.|.+. .+.+ .+.|.|+|++ ..+ ....++.....++..+|.|.+++.+|+|.|+|
T Consensus 11 ~v~~G~~v~L~C~v~-~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (216)
T 2xzc_L 11 SAAPGQKVTISCSGS-SSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC 89 (216)
T ss_dssp EECTTCCEEEEEECC-TTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCCeEEEEEEee-cCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEE
Confidence 688999999999952 3343 5789999953 222 11357777767777899999999999999999
Q ss_pred EEEeCCe--eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 580 KATNALG--EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 580 ~a~N~~G--~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
.|.|..| .......|.|...+ .+|.+...... ..+.+|+.++|.
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~P~v~~~~~~-~~~~~g~~v~L~ 135 (216)
T 2xzc_L 90 GTWDSSLNPVFGGGTKLEIKRTV---------------------------------AAPSVFIFPPS-DEQLKSGTASVV 135 (216)
T ss_dssp EEECTTSCEEEBCCEEEEECCCC---------------------------------BCCEEEEECCC-HHHHHTTEEEEE
T ss_pred EEEeCCCcceECCCEEEEEcCCC---------------------------------CCCceEEeCCC-hhhccCCcEEEE
Confidence 9999886 22223456664211 24666554333 233469999999
Q ss_pred EEEeeCC-CCCe-EEEEEECCEEccCCCcE--EEEE-eCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 658 CRVVPVG-DPTM-RFEWFVNGVELKMGSRF--HVQH-DFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 658 C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~--~~~~-~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
|.+ .| .|.+ .|.|+|||+.+..+... .... .++ .+.|.|..+..+|+|.|+|.|.|.........
T Consensus 136 C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~ 209 (216)
T 2xzc_L 136 CLL--NNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTK 209 (216)
T ss_dssp EEE--EEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCEEE
T ss_pred EEE--EeEcCCceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCceEE
Confidence 999 56 5654 99999999998765111 1111 111 24799999999999999999999986654333
No 249
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.81 E-value=1e-19 Score=185.76 Aligned_cols=170 Identities=14% Similarity=0.157 Sum_probs=53.8
Q ss_pred cccCCCceEEEEEEeeCCCCCc--EEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCee-----
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL--KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGE----- 587 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~--~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~----- 587 (808)
.+.+|+.++|+|.+. .+.|.. .|+|||+++.|..... .......+|.+.....+|.+.|+|+|.|..+.
T Consensus 97 ~~~~G~~~~LtC~v~-g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l 172 (291)
T 1mq8_A 97 WQPVGKNLTLRCQVE-GGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLEL 172 (291)
T ss_dssp BCCSSCCCEEEEEEC-CCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCE
T ss_pred cccCCCCEEEEEEec-CccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEecCCccCCcc
Confidence 378899999999994 445543 6999999988753221 01123346888888788888999999997652
Q ss_pred ---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCC
Q psy2145 588 ---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVG 664 (808)
Q Consensus 588 ---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g 664 (808)
.+....|.|...|.. .|.+. .+..+.+|+.++|.|.+ .|
T Consensus 173 ~~~~s~~~~L~V~~~P~~--------------------------------~~~~~----~p~~l~eG~~v~l~C~~--~g 214 (291)
T 1mq8_A 173 FENTSAPYQLQTFVLPAT--------------------------------PPQLV----SPRVLEVDTQGTVVCSL--DG 214 (291)
T ss_dssp EEECCCCEECBC--------------------------------------------------------------------
T ss_pred ccccccceEEEEEecCCC--------------------------------Cceec----CCcCccCCCeEEEEEEc--CC
Confidence 233345555543211 01111 12357899999999999 78
Q ss_pred CCCe---EEEEEECCEEccCCCcEEEEEeCCEEEEEEccC---CCCC--cEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 665 DPTM---RFEWFVNGVELKMGSRFHVQHDFGYVTLDITKC---VPAD--SGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 665 ~P~p---~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v---~~~D--~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
.|++ .|.|++||+.+.... ..+++ .+.+... ..+| .+.|+|.|.|.....++.-.|+|..-|
T Consensus 215 ~~P~~~~~v~w~~~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 215 LFPVSEAQVHLALGDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred CCCCcccEEEEEECCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCC
Confidence 7554 699999999987531 11222 2222222 3434 667778888866667777788887543
No 250
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.81 E-value=1.8e-20 Score=184.81 Aligned_cols=174 Identities=17% Similarity=0.193 Sum_probs=125.8
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee------------ccCcEEEEeeCCeEEEEEcccCcCCC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT------------IGHRFRPIHDFGYVALDIIDTIPEDS 120 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~D~ 120 (808)
.|..+ .+.+|++++|.|.+. +.|.+.|.|||+ |..+. ...|+.+..+.+..+|.|.+++.+|+
T Consensus 5 qp~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 81 (212)
T 1nfd_E 5 QPSSA-SVTVGETVKITCSGD--QLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDE 81 (212)
T ss_dssp CCSEE-EEETTSCCCEEEEET--TGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGC
T ss_pred CCCeE-EEeCCCcEEEEEecC--CCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccC
Confidence 37777 899999999999987 466678999984 33331 14678777777788999999999999
Q ss_pred eeEEEEEEecCcce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 121 GTYTCRAVNLVGFA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 121 G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|.|+|.|.|..+.. .....|.|.... ..+|.+...+....+.+
T Consensus 82 G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~----------------------------------~~~p~v~~~~~~~~~~~ 127 (212)
T 1nfd_E 82 AAYYCLSSYGDNNDLVFGSGTQLTVLRGP----------------------------------KSSPKVTVFPPSPEELR 127 (212)
T ss_dssp SEEEEEEEETTTTEEEECCCEEEEEECCC----------------------------------CBCCEEECCCCCHHHHH
T ss_pred EEEEEEEEcccCcccccCCceEEEEccCC----------------------------------CCCCEEEeeCCchHhcc
Confidence 99999999732211 223455554211 34677776665555678
Q ss_pred CCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE-E-EecCc---eEEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 198 GQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT-E-TNNFG---FVALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~-~-~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
|+.++|.|.+.+ ..|. +.|.|+|||.++..+.... . ...++ ...|.|.++..+|+|.|+|.|.|..+.
T Consensus 128 g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 128 TNKATLVCLVND-FYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp TTEECCCEEEEE-EBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CCceEEEEEEEe-eECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 999999999964 2244 7999999999987543211 0 11111 125999999999999999999997664
No 251
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.81 E-value=3.8e-19 Score=173.72 Aligned_cols=171 Identities=14% Similarity=0.155 Sum_probs=120.6
Q ss_pred ccCCCCcEEEEEEEeeC--CCCCceEEEEeCCEEeec------------cCcEEEEeeCCeEEEEEcccCcCCCeeEEEE
Q psy2145 61 NLRERGHAHFECKLEPV--TDSNLKVEWFKNGRPVTI------------GHRFRPIHDFGYVALDIIDTIPEDSGTYTCR 126 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~--~~p~~~v~W~~~g~~l~~------------~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 126 (808)
.+.+|++++|.|.+.+. +.|.+.+.|++++..+.. ..|..+. ..+..+|.|.+++.+|+|.|+|.
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEEEE
Confidence 68899999999999631 236679999999988731 2233331 22345899999999999999999
Q ss_pred EEecCcce-----EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeE
Q psy2145 127 AVNLVGFA-----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRA 201 (808)
Q Consensus 127 a~n~~g~~-----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v 201 (808)
|.|..|.. ...+.|.|... ...|.+.... ...|+.+
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~~~~~~----~~~g~~~ 124 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKAD-----------------------------------FPTPSISDFE----IPTSNIR 124 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECC-----------------------------------CCCCEEEEEE----CSSTTEE
T ss_pred EEcCCCCccccccccEEEEEEcCC-----------------------------------CCCCceEecc----CCCCCeE
Confidence 99987654 34566666532 1234443322 2459999
Q ss_pred EEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEe-cCceEE-EEEccCCCCCcEEEEEEEEeCceeEEEEEE
Q psy2145 202 HFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETN-NFGFVA-LDIMQCLPEDSGVYTCRAVNALGQAVTSGN 272 (808)
Q Consensus 202 ~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-~~~~~~-L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~ 272 (808)
+|.|.+. .+.|.+.|.|+|||..+.......... +++... ..+..+..+|.|.|+|.|.|..|..+....
T Consensus 125 ~l~C~~~-~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 125 RIICSTS-GGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp EEEEEEE-EESSCEEEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred EEEEecC-CccCCCEEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 9999994 278899999999999987553333232 324322 244566679999999999999988776544
No 252
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.81 E-value=4e-19 Score=180.16 Aligned_cols=187 Identities=17% Similarity=0.281 Sum_probs=124.6
Q ss_pred eeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCE--------------ecCCCCCeEEEeeCcEEEEEECCCCC
Q psy2145 506 FTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEK--------------PLEDSSRITTKHDFGYVAMDLSHVRA 571 (808)
Q Consensus 506 f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~--------------~l~~~~~~~~~~~~~~~~L~I~~v~~ 571 (808)
+...+..+ .+.+|++|+|.|.+ .+.|.+.+.|+|+.. ......++.....++.++|.|.+++.
T Consensus 7 v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 7 LIQSTSSL-SASLGDRVTISCRA--SQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp EECSCSEE-EECTTCCEEEEEEE--SSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEecCCEE-EeeCCCcEEEEEEe--cccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 34444443 58899999999999 889999999998531 11224677777777778999999999
Q ss_pred CCCEEEEEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 572 EDEGIYICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
+|+|.|.|.|.|..+... ....|.|...+...+... . ... .......|.+...+. ...+.+
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~--~-----------~~~----~~~~~~~~~~~~~~~-~~~v~~ 145 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGG--S-----------GGG----GSGGGGSEVQLQQSG-PELVKP 145 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC-----------------------------------------CEECC-CEEECT
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccc--c-----------ccc----cccCcccceEEecCC-ceEEcC
Confidence 999999999999866432 234566654321000000 0 000 000001122222322 356889
Q ss_pred CceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc-----------------CCCcEEEEEe--CCEEEEEEccCCCCCcE
Q psy2145 651 GQSAHYDCRVVPVGDP--TMRFEWFVN--GVELK-----------------MGSRFHVQHD--FGYVTLDITKCVPADSG 707 (808)
Q Consensus 651 G~~v~l~C~v~~~g~P--~p~i~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~~D~G 707 (808)
|++++|.|.+ .|.| .+.|.|||+ |..+. ...|+.+..+ ....+|.|.++..+|+|
T Consensus 146 G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 223 (250)
T 3esu_F 146 GASVKISCKD--SGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSA 223 (250)
T ss_dssp TCCEEEEEEC--CSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCE
T ss_pred CceEEEEEEe--cCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCE
Confidence 9999999999 6777 889999997 54331 1367777655 45678999999999999
Q ss_pred EEEEEEEe
Q psy2145 708 VYMCKAIN 715 (808)
Q Consensus 708 ~Y~C~A~N 715 (808)
.|+|.|.|
T Consensus 224 ~Y~C~~~~ 231 (250)
T 3esu_F 224 VYFCARSG 231 (250)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999998
No 253
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.81 E-value=8.9e-20 Score=187.08 Aligned_cols=185 Identities=17% Similarity=0.294 Sum_probs=125.6
Q ss_pred eeeecCCCcccccCCCceEEEEEEeeC---CCCCcEEEEEECCEecCCC------------------CCeEEEee--CcE
Q psy2145 505 VFTKPLQNIDAVEEGKNAHFSCRLIPV---GDPTLKVEWFRNEKPLEDS------------------SRITTKHD--FGY 561 (808)
Q Consensus 505 ~f~~~~~~~~~v~~G~~v~l~C~v~~~---g~P~~~v~W~k~g~~l~~~------------------~~~~~~~~--~~~ 561 (808)
.+..+...+ .+.+|+.+.|.|.+ . +.|.+.|.|+|++...... .++.+..+ .+.
T Consensus 7 ~v~~~~~~~-~v~~G~~v~L~C~~--~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 83 (268)
T 3mj6_A 7 GLTVSSPQL-RVHVGESVLMGCVV--QRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHND 83 (268)
T ss_dssp -----CCEE-EEETTCCEEECCBC--CCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTB
T ss_pred ccccCCCce-EEecCCcEEEEEEe--ecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCE
Confidence 344444444 68899999999998 5 7888999999976533221 33332211 122
Q ss_pred EEEEECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEee
Q psy2145 562 VAMDLSHVRAEDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQL 641 (808)
Q Consensus 562 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~ 641 (808)
.+|.|.+++.+|+|.|+|.|.|..+....+..+.+...+. .|.
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~---------------------------------~p~---- 126 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE---------------------------------EPR---- 126 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEECC---------------------------------CCS----
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEecc---------------------------------CCC----
Confidence 4799999999999999999999876654444444443221 122
Q ss_pred cCCCccccCCceEEEEEEEee-CCCCCeEEEEEEC-CEEccC-----------------C----CcEEEEE--eCCEEEE
Q psy2145 642 LTGTSEIMEGQSAHYDCRVVP-VGDPTMRFEWFVN-GVELKM-----------------G----SRFHVQH--DFGYVTL 696 (808)
Q Consensus 642 ~~~~~~v~~G~~v~l~C~v~~-~g~P~p~i~W~~~-g~~l~~-----------------~----~~~~~~~--~~~~~~L 696 (808)
...+.+|+.+.|.|.+.. .|.|.+.|.|+++ |..+.. + .++.+.. .....+|
T Consensus 127 ---~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 203 (268)
T 3mj6_A 127 ---DLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSI 203 (268)
T ss_dssp ---EEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCE
T ss_pred ---ccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEE
Confidence 245778999999999832 4779999999994 422111 1 1222111 1234589
Q ss_pred EEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 697 DITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 697 ~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
.|.++..+|+|.|+|.|.|..|....++.|.|...+
T Consensus 204 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 239 (268)
T 3mj6_A 204 KLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred EECcCChhhCeEEEEEEEcCCceEEEEEEEEEEcCC
Confidence 999999999999999999999999999999995443
No 254
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.81 E-value=1.1e-19 Score=186.54 Aligned_cols=181 Identities=14% Similarity=0.199 Sum_probs=124.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEee-CCCCCceEEEEeCCEEeec------------------cCcEEEEe--eCCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEP-VTDSNLKVEWFKNGRPVTI------------------GHRFRPIH--DFGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~-~~~p~~~v~W~~~g~~l~~------------------~~r~~~~~--~~~~~~L~ 111 (808)
...|..+ .+.+|++++|.|.+.. .+.+.+.|.|+|++..... ..|+.+.. ..+..+|.
T Consensus 9 ~~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 87 (268)
T 3mj6_A 9 TVSSPQL-RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLL 87 (268)
T ss_dssp ---CCEE-EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEE
T ss_pred ccCCCce-EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEE
Confidence 3455666 8999999999999872 1367789999996542211 13444321 12335799
Q ss_pred EcccCcCCCeeEEEEEEecCcceEEE--EEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFAEVQ--ATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~~~~--~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
|.+++.+|+|.|+|.|.|..+..... +.|.|.. ..
T Consensus 88 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-------------------------------------------~~ 124 (268)
T 3mj6_A 88 LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-------------------------------------------EE 124 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-------------------------------------------CC
T ss_pred ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-------------------------------------------cC
Confidence 99999999999999999976655444 4444431 02
Q ss_pred cCceeecCCCeEEEEEEEee-cCCCCeEEEEeeC-CEEccC-----------------CC----ceEEEe--cCceEEEE
Q psy2145 190 LKNCEIKEGQRAHFECRLIP-VSDNTMKVEWFHN-NVPIKS-----------------GS----RFTETN--NFGFVALD 244 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~-~~~p~~~v~W~~~-g~~l~~-----------------~~----~~~~~~--~~~~~~L~ 244 (808)
+....+.+|++++|.|.+.+ .+.|.+.|.|+++ +..+.. .. +..... ..+..+|.
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 204 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIK 204 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEE
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEE
Confidence 33567889999999999842 3668899999993 322111 01 111111 11233899
Q ss_pred EccCCCCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 245 IMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 245 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
|.+++.+|+|.|+|.|.|..|....++.|.|..
T Consensus 205 i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 205 LQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 999999999999999999999988899998854
No 255
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.81 E-value=4.3e-19 Score=180.25 Aligned_cols=199 Identities=19% Similarity=0.251 Sum_probs=133.5
Q ss_pred cCCCcccccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEec-----------------CCCCCeEEEee--CcEEEEE
Q psy2145 509 PLQNIDAVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPL-----------------EDSSRITTKHD--FGYVAMD 565 (808)
Q Consensus 509 ~~~~~~~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l-----------------~~~~~~~~~~~--~~~~~L~ 565 (808)
.+.++ .+.+|++|+|.|.+ .+.+ .+.|.|+|. +..+ ....++.+..+ .+.++|.
T Consensus 7 ~p~~~-~v~~G~~v~L~C~~--~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 7 QSGAE-LVKPGASVRLSCTA--SGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp ECCCE-EECTTCCEEEEEEE--CSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred cCCCe-eecCCCcEEEEEEe--eCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 33344 58899999999998 6644 778999982 2111 11356666654 3466899
Q ss_pred ECCCCCCCCEEEEEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC
Q psy2145 566 LSHVRAEDEGIYICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG 644 (808)
Q Consensus 566 I~~v~~~D~G~Y~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~ 644 (808)
|.+++.+|+|.|.|.|.|..+... ..+.|.|...+..... ........+|.+...+.
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~---------------------~~~~~~~~~~~v~~~p~- 141 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGG---------------------GGSGGGGSELVMTQTPA- 141 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC------------------------------CCEEEECS-
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccc---------------------cccCCCcccceEECcCC-
Confidence 999999999999999999766542 4466666642110000 00000112345554433
Q ss_pred CccccCCceEEEEEEEeeCCCCCe----EEEEEEC--CEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCc
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGDPTM----RFEWFVN--GVELK------------MGSRFHVQHDFGYVTLDITKCVPADS 706 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~P~p----~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~ 706 (808)
...+.+|++++|.|.+ .|.|.+ .|.|||+ |..+. ...|+.+...+...+|+|.++..+|+
T Consensus 142 ~~~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 219 (253)
T 3uzq_A 142 SLAVSLGQRATISCRA--SENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDV 219 (253)
T ss_dssp EEEECTTSCEEEEEEE--SSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEeCCCCEEEEEEe--cCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHC
Confidence 3568899999999999 788887 9999995 33221 23677777777788999999999999
Q ss_pred EEEEEEEEeCCcceEE-EEEEEEEeCCCc
Q psy2145 707 GVYMCKAINRAGEAVS-STSLKVKSKSDI 734 (808)
Q Consensus 707 G~Y~C~A~N~~G~~~~-s~~l~V~~~p~~ 734 (808)
|.|+|.|.|..+.... -+.|.|...+.+
T Consensus 220 G~Y~C~~~n~~~~~fg~gt~l~v~~~~~~ 248 (253)
T 3uzq_A 220 ATYFCQRSNEVPWTFGGGTKLEIKRPLEH 248 (253)
T ss_dssp EEEEEEECSSSSCCBCCCEEEEECCC---
T ss_pred EEEEEEEccCCCcEECCCEEEEEcCCCCC
Confidence 9999999997654433 456777766544
No 256
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=177.16 Aligned_cols=193 Identities=18% Similarity=0.211 Sum_probs=134.5
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEc-----------------cCCCceEEE--ecCc
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPI-----------------KSGSRFTET--NNFG 239 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l-----------------~~~~~~~~~--~~~~ 239 (808)
..+|.+...+..+.+.+|++|+|.|.+.+...+.+.+.|||. +..+ ....|+.+. ...+
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 457788888999999999999999999532246788999983 2111 012466665 3345
Q ss_pred eEEEEEccCCCCCcEEEEEEEEeC------------ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccc
Q psy2145 240 FVALDIMQCLPEDSGVYTCRAVNA------------LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSI 307 (808)
Q Consensus 240 ~~~L~I~~~~~~D~G~Y~C~a~n~------------~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~ 307 (808)
..+|.|.+++.+|+|.|.|.|.|. .+.....+.|.|...+......
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~---------------------- 141 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGG---------------------- 141 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------------------------
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCccccccc----------------------
Confidence 678999999999999999999986 3334445677776532100000
Q ss_pred cccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCc-cEEEEEEC--CEecc------------CCCcEEEEeeCcE
Q psy2145 308 IEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSK-LKVTWLRN--GVPIQ------------ASNRVSTMHDFGY 372 (808)
Q Consensus 308 ~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~-~~v~W~~~--g~~l~------------~~~~~~~~~~~~~ 372 (808)
.......+|.+...+....+.+|+.++|.|.+ .+.+. +.+.|+|. |..+. ...++.+..++..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 219 (256)
T 3juy_B 142 GSGGGGSEIVLTQAPGTLSLSPGERATFSCRS--SHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTD 219 (256)
T ss_dssp ----CCCCCCEEEECSEEEECTTSCEEEEEEE--SSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTE
T ss_pred ccCCCcceeEEEecCCeEEEeCCCCEEEEEEE--CCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCE
Confidence 00000114566667778889999999999999 66665 89999983 33222 2356776666777
Q ss_pred EEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 373 VALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 373 ~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
.+|.|.++..+|+|.|.|.|.|..+
T Consensus 220 ~~L~I~~v~~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 220 FTLTITRVEPEDFALYYCQVYGASS 244 (256)
T ss_dssp EEEEESSCCGGGCSEEEEEECCSSC
T ss_pred EEEEECCCCHhHCEEEEEEEeeCCC
Confidence 7899999999999999999998644
No 257
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.80 E-value=2.2e-19 Score=183.31 Aligned_cols=261 Identities=12% Similarity=0.120 Sum_probs=106.3
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCeEEEEee--CCEEc-cCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH--NNVPI-KSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~--~g~~l-~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
.+.|++..|.+|+++.|.|.+. ...+..+.|.- ....+ ..+. +...|.|.++..+ |.|+|++...
T Consensus 3 ~v~P~~~~V~~G~sv~l~Cs~~--c~~p~~~~~~t~l~~~~~~~~g~--------~~~~~~l~~v~~~--~~y~C~~~~~ 70 (291)
T 1mq8_A 3 SVSPSKVILPRGGSVLVTCSTS--CDQPKLLGIETPLPKKELLLPGN--------NRKVYELSNVQED--SQPMCYSNCP 70 (291)
T ss_dssp EEECSEEEECTTCEEEEEEEEC--CSSCSEEEEECSSCCCCCCCSCS--------SEEEEEEESCCSC--CCCEEEEECS
T ss_pred EEeCCccEEcCCCeEEEEEeCC--CCCCccceEEecCCCcccccCCC--------ceEEEEEEecccC--CeEEEEEEcC
Confidence 4466778899999999999993 33333488853 11122 1111 2225788888743 4699999754
Q ss_pred ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC
Q psy2145 264 LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG 343 (808)
Q Consensus 264 ~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g 343 (808)
.-.....+.|.|..+|. .+.+.. ....+.+|+.++|.|.+. .+
T Consensus 71 ~~~~~~~v~l~V~~~P~----------------------------------~v~I~~--~~~~~~~G~~~~LtC~v~-g~ 113 (291)
T 1mq8_A 71 DGQSTAKTFLTVYWTPE----------------------------------RVELAP--LPSWQPVGKNLTLRCQVE-GG 113 (291)
T ss_dssp SCEEEEECEEEECBCCS----------------------------------CCCBCC--CCSBCCSSCCCEEEEEEC-CC
T ss_pred CccEEEEEEEEEecCCC----------------------------------CCEEec--CCccccCCCCEEEEEEec-Cc
Confidence 33445566788765431 222221 223478899999999983 34
Q ss_pred CCcc--EEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcc--------eEEEEEEEEEecccc
Q psy2145 344 DSKL--KVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGE--------AVTSSTLFVESKASL 413 (808)
Q Consensus 344 ~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~--------~~~~~~l~V~~~~~~ 413 (808)
.|.. +|+|||+++.+.... ...+....+|.+.....+|.+.|+|+|.|..+. .+....|.|.+.|..
T Consensus 114 ~P~~~l~itW~kg~~~l~~~~---~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~ 190 (291)
T 1mq8_A 114 APRANLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPAT 190 (291)
T ss_dssp BSTTTEEEEEESSSSEEEEEE---CCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC------
T ss_pred cCCCCcEEEEEECCEEeeccc---CCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCC
Confidence 5553 699999998875422 111223346777777777778999999997663 122245555543211
Q ss_pred cccccchHHHhhhhccccccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCC
Q psy2145 414 QLDTQNEAALQKIQNLEDTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRP 493 (808)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (808)
.
T Consensus 191 ~------------------------------------------------------------------------------- 191 (291)
T 1mq8_A 191 P------------------------------------------------------------------------------- 191 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CcCCCCccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCc---EEEEEECCEecCCCCCeEEEeeCcEEEEEECCC-
Q psy2145 494 EVDDNATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTL---KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHV- 569 (808)
Q Consensus 494 ~~~~~~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~---~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v- 569 (808)
|.+..+ ..+.+|+.++|+|.+ .|.|++ .|+|+++|+.+.... ..+++ .+.+...
T Consensus 192 ----------~~~~~p----~~l~eG~~v~l~C~~--~g~~P~~~~~v~w~~~g~~l~~~~----~~~g~--~~~~~~~~ 249 (291)
T 1mq8_A 192 ----------PQLVSP----RVLEVDTQGTVVCSL--DGLFPVSEAQVHLALGDQRLNPTV----TYGND--SFSAKASV 249 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------ceecCC----cCccCCCeEEEEEEc--CCCCCCcccEEEEEECCEecCcee----eecCC--eEEEEEec
Confidence 111111 036789999999999 776554 599999999987532 11222 2333322
Q ss_pred --CC--CCCEEEEEEEEeCCeeEEEEEEEEEEecc
Q psy2145 570 --RA--EDEGIYICKATNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 570 --~~--~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~ 600 (808)
.+ ++++.|+|.|.|......+..+|.|...|
T Consensus 250 ~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 250 SVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP 284 (291)
T ss_dssp -----------------------------------
T ss_pred ceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEcCC
Confidence 34 34778889999876667778888887643
No 258
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.80 E-value=2.3e-19 Score=177.10 Aligned_cols=169 Identities=20% Similarity=0.341 Sum_probs=117.3
Q ss_pred cccCCCceEEEEEEeeC-----CCCCcEEEEEECCEe------c-----------CCCCCeEEEee--CcEEEEEECCCC
Q psy2145 515 AVEEGKNAHFSCRLIPV-----GDPTLKVEWFRNEKP------L-----------EDSSRITTKHD--FGYVAMDLSHVR 570 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~-----g~P~~~v~W~k~g~~------l-----------~~~~~~~~~~~--~~~~~L~I~~v~ 570 (808)
.+.+|+.|.|.|.+... +.+.+.+.|+|++.. + ....|+.+..+ .+.++|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 11 TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 68899999999998411 126788999998752 1 11245555432 234579999999
Q ss_pred CCCCEEEEEEEEeCCeeEE----EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 571 AEDEGIYICKATNALGEAV----TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G~~~----~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
.+|+|.|.|.+.|..+... ..+.|.|...+. +|.+... .
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~---------------------------------~p~i~~~----~ 133 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIE---------------------------------KPDIHFL----E 133 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCC---------------------------------CCEEC------C
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecCCC---------------------------------CCceecC----c
Confidence 9999999999999874332 356777765321 2444321 2
Q ss_pred cccCCceEEEEEEEeeCC----CCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcce--
Q psy2145 647 EIMEGQSAHYDCRVVPVG----DPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEA-- 720 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g----~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~-- 720 (808)
.+.+|+.++|.|.+ .| .|.|.|.|+++|..+... +. ...+.|.|..+..+|+|.|+|.|.|..|..
T Consensus 134 ~~~~G~~v~L~C~~--~~~~~~~p~p~v~W~~~~~~~~~~-~~-----~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~ 205 (214)
T 2zg1_A 134 PLESGRPTRLSCSL--PGSCEAGPPLTFSWTGNALSPLDP-ET-----TRSSELTLTPRPEDHGTNLTCQMKRQGAQVTT 205 (214)
T ss_dssp CCCTTCCEEEEEEC--TTCCSCSSCCEEEEESSTTSSSCS-SC-----CCSSEEEECCCTTCCSCEEEEEEECC----CC
T ss_pred cccCCCeEEEEEEe--ccCCCCCCCceEEEeCCCCccCCC-Cc-----eeEEEEEEecccHHcCcEEEEEEEeCCCCcce
Confidence 36789999999998 56 489999999999765422 21 233489999999999999999999987654
Q ss_pred EEEEEEEE
Q psy2145 721 VSSTSLKV 728 (808)
Q Consensus 721 ~~s~~l~V 728 (808)
+.++.|.|
T Consensus 206 ~~~v~l~V 213 (214)
T 2zg1_A 206 ERTVQLNV 213 (214)
T ss_dssp EEEEECCC
T ss_pred EEEEEEEe
Confidence 44444443
No 259
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.80 E-value=2.9e-19 Score=170.32 Aligned_cols=161 Identities=9% Similarity=0.139 Sum_probs=119.4
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--CCEEe----------eccCcEEEEeeCCeEEEEEcccCcCCCee
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--NGRPV----------TIGHRFRPIHDFGYVALDIIDTIPEDSGT 122 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--~g~~l----------~~~~r~~~~~~~~~~~L~I~~~~~~D~G~ 122 (808)
.+..+ .+.+|++|+|.|...+.+.+.+.|.|+| ++..| ..+.|+.+..++ +|.|.+++.+|+|.
T Consensus 5 ~~~~v-~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ng---sL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 5 NALET-WGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDI 80 (182)
T ss_dssp CCEEE-EEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTS---CEEECSCCGGGCEE
T ss_pred cccEE-EEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCC---CEEECCCChhhCEE
Confidence 34445 7889999999995432235677999999 99887 346677766443 69999999999999
Q ss_pred EEEEEEecCcceEE--EEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCe
Q psy2145 123 YTCRAVNLVGFAEV--QATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQR 200 (808)
Q Consensus 123 Y~C~a~n~~g~~~~--~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~ 200 (808)
|+|.|.|..|.... .+.|.|... ..+|.+... +..
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~-----------------------------------~~~P~i~~~--------~~~ 117 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQER-----------------------------------VSKPKISWT--------CIN 117 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECC-----------------------------------CCCCEEEEE--------TTT
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCc-----------------------------------CCCCEEEEc--------cCc
Confidence 99999999887643 456666532 234555442 336
Q ss_pred EEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 201 AHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 201 v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
++|.|.+ .+.|.+.|.|++||..+ .+ ... .|.+.. ..+|+|.|+|.|.|..|...+...+.+
T Consensus 118 v~L~C~~--~~~p~~~~~W~~~g~~l-~~-------~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~c 179 (182)
T 1hnf_A 118 TTLTCEV--MNGTDPELNLYQDGKHL-KL-------SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVSC 179 (182)
T ss_dssp TEEEEEC--SSCSSCEEEEEESSCEE-EE-------ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEEEeEc--cCCCCCEEEEEECCEEC-CC-------CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEcceecC
Confidence 8999999 57778999999999988 21 111 233333 478999999999999999888877754
No 260
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.80 E-value=7.2e-20 Score=181.96 Aligned_cols=183 Identities=18% Similarity=0.314 Sum_probs=125.9
Q ss_pred CccccCCCCcEEEEEEEeeCCC---CCceEEEEeCCEEe-------------eccCcEEEEee---CCeEEEEEcccCcC
Q psy2145 58 SIENLRERGHAHFECKLEPVTD---SNLKVEWFKNGRPV-------------TIGHRFRPIHD---FGYVALDIIDTIPE 118 (808)
Q Consensus 58 ~~~~v~~G~~v~l~C~~~~~~~---p~~~v~W~~~g~~l-------------~~~~r~~~~~~---~~~~~L~I~~~~~~ 118 (808)
.+ .+.+|++++|.|.+.+.+. ..+.|.|+|++... ....|+.+..+ .+..+|.|.+++.+
T Consensus 4 ~v-~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 4 PV-VALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CC-CCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CE-EEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 44 7899999999999984211 23789999987432 11234443321 13457999999999
Q ss_pred CCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCC
Q psy2145 119 DSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEG 198 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G 198 (808)
|+|.|+|.+.|. +.....+.|.|... ..+|.+...+ ...+.+|
T Consensus 83 D~G~Y~C~~~~~-~~~~~~~~l~V~~~-----------------------------------~~~p~i~~~~-~~~v~~G 125 (222)
T 4i0k_A 83 DEGSYTCFVSIQ-DFDSAAVSLQVAAP-----------------------------------YSKPSMTLEP-NKDLRPG 125 (222)
T ss_dssp GCSCEEEEEEEC-CCCCCCCCCCCCBC-----------------------------------CCCCEEECCC------CC
T ss_pred cCEEEEEEEEeC-CCceEEEEEEEEcC-----------------------------------CCCCcEEeCC-CceecCC
Confidence 999999999985 33444444444321 2345665544 3467889
Q ss_pred CeEEEEEEEeecCCCCeEEEEee-CCEEccCCCceEEE--ecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 199 QRAHFECRLIPVSDNTMKVEWFH-NNVPIKSGSRFTET--NNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 199 ~~v~L~C~~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~--~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
+.++|.|.+. .+.|.+.+.|++ ++..+......... .++.+..|.|.++..+|.|.|+|.|.|..|....++.|.|
T Consensus 126 ~~~~l~C~~~-~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V 204 (222)
T 4i0k_A 126 NMVTITCSSY-QGYPEAEVFWKDGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTI 204 (222)
T ss_dssp SEEEEEEEEE-EEBSCCEEEEECTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEEC
T ss_pred ceEEEEEecc-cccCCCeEEEEcCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEE
Confidence 9999999995 377889999999 56666543332222 2233446899999999999999999999999999999999
Q ss_pred eeCC
Q psy2145 276 HSKK 279 (808)
Q Consensus 276 ~~~~ 279 (808)
..+|
T Consensus 205 ~~~p 208 (222)
T 4i0k_A 205 TGQP 208 (222)
T ss_dssp CC--
T ss_pred eCCc
Confidence 7654
No 261
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.80 E-value=1.9e-19 Score=177.17 Aligned_cols=180 Identities=11% Similarity=0.122 Sum_probs=124.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEee----------------ccCcEEEEee--CCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPVT----------------IGHRFRPIHD--FGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l~----------------~~~r~~~~~~--~~~~~L~I 112 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||+ |..+. ...|+.+..+ .+.++|.|
T Consensus 4 v~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 82 (210)
T 3d9a_H 4 LQESGPS-LVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDL 82 (210)
T ss_dssp EEEESCS-EECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred EecCCCE-EecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEE
Confidence 3457777 89999999999999852113479999985 32211 2457777654 35679999
Q ss_pred cccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCc
Q psy2145 113 IDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKN 192 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 192 (808)
.+++.+|+|.|+|.|.|.. .....+.|.|.... ..+|.+...+..
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~----------------------------------~~~P~v~~~~~~ 127 (210)
T 3d9a_H 83 NSVTTEDTATYYCANWDGD-YWGQGTLVTVSAAK----------------------------------TTPPSVYPLAPG 127 (210)
T ss_dssp CSCCGGGCEEEEEEETTSS-CBCCCEEEEECCCC----------------------------------CBCCEEEEECCT
T ss_pred CCCCcccCEEEEEEEecCc-ccccceEEEeccCC----------------------------------CCCCEEEEecCC
Confidence 9999999999999998853 22233566664211 346666655545
Q ss_pred eeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeCceeEE
Q psy2145 193 CEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNALGQAV 268 (808)
Q Consensus 193 ~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 268 (808)
..+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+...........+. ...|.|.++..+| |.|+|.|.|..|...
T Consensus 128 ~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 205 (210)
T 3d9a_H 128 SAAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTK 205 (210)
T ss_dssp TSCCCSSEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEE
T ss_pred cccccCCcEEEEEEEee-EecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcc
Confidence 56789999999999953 33766 999999998653111111111111 2369999998877 999999999988765
Q ss_pred EE
Q psy2145 269 TS 270 (808)
Q Consensus 269 ~~ 270 (808)
..
T Consensus 206 ~~ 207 (210)
T 3d9a_H 206 VD 207 (210)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 262
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.80 E-value=3.2e-19 Score=177.27 Aligned_cols=184 Identities=11% Similarity=0.131 Sum_probs=127.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee----------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT----------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~----------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.+.|||++ .. +. ...|+.+..+ .+..+
T Consensus 4 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 82 (222)
T 1q9r_B 4 LVESGGG-LVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILY 82 (222)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEE
T ss_pred EecCCce-eEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEE
Confidence 3456667 899999999999998421126789999842 21 10 1357777654 35679
Q ss_pred EEEcccCcCCCeeEEEEEEecCc-----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVG-----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP 184 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g-----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (808)
|.|.+++.+|+|.|.|.+.|..| .....+.|.|.... ..+|
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P 128 (222)
T 1q9r_B 83 LQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK----------------------------------TTPP 128 (222)
T ss_dssp EEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC----------------------------------CBCC
T ss_pred EEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC----------------------------------CCCC
Confidence 99999999999999999998754 22234567665311 3456
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEE
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a 260 (808)
.+...+....+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+..........++. ...|.|.++..+| |.|+|.|
T Consensus 129 ~i~~~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a 206 (222)
T 1q9r_B 129 SVYPLAPGSAAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNV 206 (222)
T ss_dssp EEEEECCCSCCCCSSEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEE
T ss_pred eEEEccccccccCCCcEEEEEEEcc-EECCCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEE
Confidence 6665554445678999999999953 24776 999999998764321111111211 1268999999999 9999999
Q ss_pred EeCceeEEEEEEE
Q psy2145 261 VNALGQAVTSGNL 273 (808)
Q Consensus 261 ~n~~g~~~~~~~l 273 (808)
.|..|.......|
T Consensus 207 ~n~~~~~~~~~~i 219 (222)
T 1q9r_B 207 AHPASSTKVDKKI 219 (222)
T ss_dssp EEGGGTEEEEEEC
T ss_pred EccCCCCcEEEec
Confidence 9998876555444
No 263
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.80 E-value=7.3e-19 Score=178.22 Aligned_cols=187 Identities=16% Similarity=0.201 Sum_probs=124.2
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC-----EEee---------ccCcEEEEeeCCeEEEEEcccCc
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG-----RPVT---------IGHRFRPIHDFGYVALDIIDTIP 117 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g-----~~l~---------~~~r~~~~~~~~~~~L~I~~~~~ 117 (808)
+...|..+ .+.+|++|+|.|.+. +.|.+.+.|||++ ..+. ...|+......+.++|.|.+++.
T Consensus 7 v~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 7 LIQSTSSL-SASLGDRVTISCRAS--QDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp EECSCSEE-EECTTCCEEEEEEES--SCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEecCCEE-EeeCCCcEEEEEEec--ccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 34456677 899999999999998 4677799999943 1111 24577777777788999999999
Q ss_pred CCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeec
Q psy2145 118 EDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIK 196 (808)
Q Consensus 118 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~ 196 (808)
+|+|.|.|.|.|..+.. .....|.|...+....... ..........++.+...+....+.
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~v~ 144 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGG-------------------SGGGGSGGGGSEVQLQQSGPELVK 144 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC-------------------------------------------CEECCCEEEC
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccc-------------------cccccccCcccceEEecCCceEEc
Confidence 99999999999876543 2334566653210000000 000000001234455566678899
Q ss_pred CCCeEEEEEEEeecCCC--CeEEEEeeC--CEEcc-----------------CCCceEEEec--CceEEEEEccCCCCCc
Q psy2145 197 EGQRAHFECRLIPVSDN--TMKVEWFHN--NVPIK-----------------SGSRFTETNN--FGFVALDIMQCLPEDS 253 (808)
Q Consensus 197 ~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~l~-----------------~~~~~~~~~~--~~~~~L~I~~~~~~D~ 253 (808)
+|++++|.|.+. +.+ .+.+.|||+ |..+. ...++.+..+ .+..+|.|.+++.+|+
T Consensus 145 ~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~Ds 222 (250)
T 3esu_F 145 PGASVKISCKDS--GYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDS 222 (250)
T ss_dssp TTCCEEEEEECC--STTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred CCceEEEEEEec--CCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccC
Confidence 999999999994 545 789999997 44331 1245555432 4556899999999999
Q ss_pred EEEEEEEEe
Q psy2145 254 GVYTCRAVN 262 (808)
Q Consensus 254 G~Y~C~a~n 262 (808)
|.|+|.|.|
T Consensus 223 G~Y~C~~~~ 231 (250)
T 3esu_F 223 AVYFCARSG 231 (250)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 999999997
No 264
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.80 E-value=6.5e-19 Score=179.29 Aligned_cols=194 Identities=17% Similarity=0.278 Sum_probs=131.4
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEe---c--------------CCCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKP---L--------------EDSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~---l--------------~~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|. +.. + ....|+.+..+ .+..+|.|.+++.
T Consensus 13 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 90 (256)
T 3umt_A 13 LVKPGASVKISCKT--SGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTS 90 (256)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEE--ecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCc
Confidence 48899999999999 5655 688999973 211 1 11356666643 3466899999999
Q ss_pred CCCEEEEEEEEeC----CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 572 EDEGIYICKATNA----LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 572 ~D~G~Y~C~a~N~----~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
+|+|.|.|.|.|. .+.....+.|.|...+.-. ...... .....+|.+...+. ...
T Consensus 91 ~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~----~~~~~~----------------~~~~~~~~~~~~p~-~~~ 149 (256)
T 3umt_A 91 EDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGS----GGGGSG----------------GGGSTDIQLTQSPS-SLS 149 (256)
T ss_dssp GGCEEEEEEECCSTTCCSCEECCCEEEEECC-----------------------------------CCCCEEEECS-EEE
T ss_pred ccCEEEEEEEccCCCccccEECCCEEEEEcCCCccc----cCcccC----------------CCCccccEEEcCCC-eEE
Confidence 9999999999998 4444445677776421100 000000 00001345555443 356
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEEC--CEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVN--GVELK------------MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
+.+|++++|.|.+ .|.|.+.|.|||+ |..+. ...|+.+...+...+|+|.++..+|+|.|+|.|
T Consensus 150 v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 227 (256)
T 3umt_A 150 ASLGERVSITCRA--SQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQ 227 (256)
T ss_dssp ECTTCCEEEEEEE--SSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEE
T ss_pred EECCCCEEEEEEE--ecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEE
Confidence 8899999999999 7899899999994 32221 246788877788889999999999999999999
Q ss_pred EeCCcceEE-EEEEEEEeCCC
Q psy2145 714 INRAGEAVS-STSLKVKSKSD 733 (808)
Q Consensus 714 ~N~~G~~~~-s~~l~V~~~p~ 733 (808)
.|..+.... .+.|.|..++.
T Consensus 228 ~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 228 YASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp CSSSSCEECCCEEEEEC----
T ss_pred eeCCCcEECCCEEEEEECCCc
Confidence 997654433 46788876643
No 265
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.80 E-value=2e-19 Score=180.66 Aligned_cols=178 Identities=19% Similarity=0.238 Sum_probs=130.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---e---------eccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---V---------TIGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l---------~~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
...|..+ .+.+|++++|.|.+.+ .|.+.|.|||++ .. + ..+.|+......+..+|.|.+++.+
T Consensus 28 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 28 TQSPSSL-SASVGDRVTITCRASQ--DVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPE 104 (237)
T ss_dssp EEECSEE-EEETTCCEEEEEEESS--CCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeCCCeE-EEeCCCcEEEEEecCC--CCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChh
Confidence 3446667 8999999999999984 578899999932 11 1 1246787777778889999999999
Q ss_pred CCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 119 DSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|+|.|+|.|.|..+.. ...+.|.|... ..+|.+...+....+.+
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~v~~~~~~~~~~~ 149 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKRT-----------------------------------VAAPSVFIFPPSDEQLK 149 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEECC-----------------------------------CBCCEEEEECCCHHHHH
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEecC-----------------------------------CCCCceEEeCCChhhcc
Confidence 9999999998876532 23345666431 45788877776666667
Q ss_pred CCeEEEEEEEeecCCC-CeEEEEeeCCEEccCCC--ceE-EEecCc----eEEEEEccCCCCCcEEEEEEEEeCceeEEE
Q psy2145 198 GQRAHFECRLIPVSDN-TMKVEWFHNNVPIKSGS--RFT-ETNNFG----FVALDIMQCLPEDSGVYTCRAVNALGQAVT 269 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p-~~~v~W~~~g~~l~~~~--~~~-~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 269 (808)
|+.++|.|.+.+ ..| .+.|.|+|||..+..+. ... ....++ ...|.|..+..+|+|.|+|+|.|.......
T Consensus 150 g~~v~l~C~~~~-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~ 228 (237)
T 3sob_L 150 SGTASVVCLLNN-FYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPV 228 (237)
T ss_dssp HTEEEEEEEEEE-EBSSCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSCE
T ss_pred CCceEEEEEEcc-cCCCceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCce
Confidence 999999999964 245 68999999999987532 111 111122 236889999999999999999997654433
No 266
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.80 E-value=6.1e-19 Score=174.30 Aligned_cols=186 Identities=12% Similarity=0.172 Sum_probs=122.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Ee-------------eccCcEEEEeeCCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PV-------------TIGHRFRPIHDFGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l-------------~~~~r~~~~~~~~~~~L~I~~ 114 (808)
+..|..+ .+.+|++|+|.|.+.+...+.+.+.|||.. . .+ ....|+.+..+.+.++|.|.+
T Consensus 3 l~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (215)
T 3nl4_H 3 VEESGGR-LVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITS 81 (215)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESS
T ss_pred eEcCCCE-EEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECC
Confidence 4567777 899999999999998533456789999832 1 11 124677777777888999999
Q ss_pred cCcCCCeeEEEEEEecCcc----eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec
Q psy2145 115 TIPEDSGTYTCRAVNLVGF----AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL 190 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 190 (808)
++.+|+|.|.|.+.|..+. ....+.|.|.... ..+|.+...+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~~~~ 127 (215)
T 3nl4_H 82 PTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ----------------------------------PKAPSVFPLA 127 (215)
T ss_dssp CCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSC----------------------------------CBCCEEEEEC
T ss_pred CCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCC----------------------------------cCCCEEEEec
Confidence 9999999999999987553 2333456664211 3467676555
Q ss_pred CceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEE-EEccCCCCCcEEEEEEEEeCceeEEE
Q psy2145 191 KNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVAL-DIMQCLPEDSGVYTCRAVNALGQAVT 269 (808)
Q Consensus 191 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L-~I~~~~~~D~G~Y~C~a~n~~g~~~~ 269 (808)
....+.+|+.++|.|.+.+...+...+.|+++|..+...........++..++ ....+...| |.|+|.|.|..|....
T Consensus 128 ~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~ 206 (215)
T 3nl4_H 128 PCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKV 206 (215)
T ss_dssp CCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEE
T ss_pred CCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcce
Confidence 55567789999999999643333567889999986543221112222332222 224566778 9999999999887666
Q ss_pred EEEEE
Q psy2145 270 SGNLL 274 (808)
Q Consensus 270 ~~~l~ 274 (808)
...|.
T Consensus 207 ~~~l~ 211 (215)
T 3nl4_H 207 DKTVA 211 (215)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 55543
No 267
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.80 E-value=7.4e-19 Score=181.53 Aligned_cols=189 Identities=20% Similarity=0.299 Sum_probs=129.8
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC-----------------CCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE-----------------DSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+. ...|+.+..+ .+..+|.|.+++.
T Consensus 37 ~v~~G~~v~L~C~~--~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 114 (282)
T 1qok_A 37 LVRSGTSVKLSCTA--SGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTS 114 (282)
T ss_dssp EEETTCCEEEEEEE--ESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEeCCCeEEEEEec--cCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCCh
Confidence 68899999999998 5665 6889999964 2110 1356766653 3457899999999
Q ss_pred CCCEEEEEEEEeCCe---eE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 572 EDEGIYICKATNALG---EA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G---~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+|+|.|.|.|.|..| .. ...+.|.|...+...- ..+ ......+|.+...+. ..
T Consensus 115 ~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~--~~~-------------------~~~~~~~~~~~~~p~-~~ 172 (282)
T 1qok_A 115 EDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSG--GGG-------------------SGGGGSENVLTQSPA-IM 172 (282)
T ss_dssp GGCEEEEEEEECSSSSCCCEEECCCEEEEEEC------------------------------------CCCEEEECS-EE
T ss_pred hhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccC--Ccc-------------------CCCCccceEEecCCC-EE
Confidence 999999999999976 11 1235677765431000 000 000001234444332 35
Q ss_pred cccCCceEEEEEEEeeCCCCCeEEEEEE--CCEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 647 EIMEGQSAHYDCRVVPVGDPTMRFEWFV--NGVELK------------MGSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+.+|++++|.|.+ .|.| +.|.||| +|..+. ...+|.+..+....+|+|.++..+|+|.|+|.
T Consensus 173 ~v~~G~~v~L~C~~--~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 249 (282)
T 1qok_A 173 SASPGEKVTITCSA--SSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQ 249 (282)
T ss_dssp EECTTCCEEEEEEE--SSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred EEcCCCcEEEEEEe--cCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEE
Confidence 68899999999999 7888 8999999 676542 24688877677788999999999999999999
Q ss_pred EEeCCcce-EEEEEEEEEe
Q psy2145 713 AINRAGEA-VSSTSLKVKS 730 (808)
Q Consensus 713 A~N~~G~~-~~s~~l~V~~ 730 (808)
|.|..+.. ...+.|.|.+
T Consensus 250 a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 250 QRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp ECSSSSCEECCCEEEEEC-
T ss_pred EeeCCCceEeCCEEEEEec
Confidence 99864432 2345677753
No 268
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.80 E-value=2e-19 Score=184.70 Aligned_cols=171 Identities=16% Similarity=0.271 Sum_probs=114.5
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEec------------CCC---C-CeEEEe-eCcEEEEEECCCCCCCCE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPL------------EDS---S-RITTKH-DFGYVAMDLSHVRAEDEG 575 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l------------~~~---~-~~~~~~-~~~~~~L~I~~v~~~D~G 575 (808)
.+.+|++|+|.|.+ .+ +.+.|.|+|. |..+ ... . |+.+.. ..+.++|.|.+++.+|+|
T Consensus 38 ~v~~G~~v~L~C~~--~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G 114 (270)
T 3qib_D 38 VKGQGQKAKMRCIP--EK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSA 114 (270)
T ss_dssp EEETTSCEEEEEEC--CT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCE
T ss_pred EEcCCCCEEEEEEe--cC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCe
Confidence 57899999999987 44 7789999982 2111 000 0 444443 234568999999999999
Q ss_pred EEEEEEEeCC----eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 576 IYICKATNAL----GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 576 ~Y~C~a~N~~----G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
.|.|.+.|.. +.......|.|..... ...+|.+.........+.+|
T Consensus 115 ~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P~v~~~~~~~~~~~~g 164 (270)
T 3qib_D 115 LYLCASSLNWSQDTQYFGPGTRLLVLEDLK------------------------------NVFPPEVAVFEPSEAEISHT 164 (270)
T ss_dssp EEEEEEESCTTCCCCEECCCEEEEEESCST------------------------------TCBCCEEEEEECCHHHHHHH
T ss_pred EEEEEEecCCCccceEECCcEEEEEccccc------------------------------cccCCceEEECCCccccccC
Confidence 9999999742 2233335666664211 11246555444444456779
Q ss_pred ceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEE-------E-EeCC---EEEEEEccCCCCC-cEEEEEEEEeCC
Q psy2145 652 QSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHV-------Q-HDFG---YVTLDITKCVPAD-SGVYMCKAINRA 717 (808)
Q Consensus 652 ~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~-------~-~~~~---~~~L~I~~v~~~D-~G~Y~C~A~N~~ 717 (808)
+.++|.|.+ .| .|.+ .|.|+|||.+|..+.+... . .++. .+.|.|.....+| .|.|+|.|.|..
T Consensus 165 ~~v~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~ 242 (270)
T 3qib_D 165 QKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 242 (270)
T ss_dssp SEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECC
T ss_pred CceEEEEEe--cceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecC
Confidence 999999999 56 6766 8999999999975322110 0 0111 1468888887777 999999999986
Q ss_pred cce
Q psy2145 718 GEA 720 (808)
Q Consensus 718 G~~ 720 (808)
...
T Consensus 243 l~~ 245 (270)
T 3qib_D 243 LSE 245 (270)
T ss_dssp BCT
T ss_pred CCC
Confidence 543
No 269
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=2.1e-20 Score=184.46 Aligned_cols=170 Identities=16% Similarity=0.241 Sum_probs=121.8
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEecC------------CCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPLE------------DSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+.+|+.++|.|.+ .+.|.+.|.|+|+ |..+. ...++.+....+...|.|.+++.+|+|.|+|.
T Consensus 10 ~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 87 (212)
T 1nfd_E 10 SVTVGETVKITCSG--DQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCL 87 (212)
T ss_dssp EEETTSCCCEEEEE--TTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEE
T ss_pred EEeCCCcEEEEEec--CCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEE
Confidence 68899999999998 7888888999985 33321 14677777677777999999999999999999
Q ss_pred EEeC-CeeE--EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 581 ATNA-LGEA--VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 581 a~N~-~G~~--~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
|.|. .+.. .....|.|...+. .+|.+...... ..+.+|+.++|.
T Consensus 88 ~~n~~~~~~~~~~~~~l~V~~~~~--------------------------------~~p~v~~~~~~-~~~~~g~~v~L~ 134 (212)
T 1nfd_E 88 SSYGDNNDLVFGSGTQLTVLRGPK--------------------------------SSPKVTVFPPS-PEELRTNKATLV 134 (212)
T ss_dssp EEETTTTEEEECCCEEEEEECCCC--------------------------------BCCEEECCCCC-HHHHHTTEECCC
T ss_pred EEcccCcccccCCceEEEEccCCC--------------------------------CCCEEEeeCCc-hHhccCCceEEE
Confidence 9973 2221 2234566643221 23555443322 345689999999
Q ss_pred EEEeeCCC-CC-eEEEEEECCEEccCCCcEE-EEE-eCC---EEEEEEccCCCCCcEEEEEEEEeCCcceE
Q psy2145 658 CRVVPVGD-PT-MRFEWFVNGVELKMGSRFH-VQH-DFG---YVTLDITKCVPADSGVYMCKAINRAGEAV 721 (808)
Q Consensus 658 C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~-~~~-~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~ 721 (808)
|.+ .|. |. +.|.|+|||.++..+.... ... .++ .+.|.|.++..+|+|.|+|.|.|..+...
T Consensus 135 C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 203 (212)
T 1nfd_E 135 CLV--NDFYPGSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGETVE 203 (212)
T ss_dssp EEE--EEEBSSCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTTTCC
T ss_pred EEE--EeeECCccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCceEE
Confidence 999 565 55 8999999999987553211 000 011 24699999999999999999999988643
No 270
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.80 E-value=7.5e-19 Score=177.07 Aligned_cols=186 Identities=19% Similarity=0.288 Sum_probs=125.8
Q ss_pred eeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCC
Q psy2145 506 FTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRA 571 (808)
Q Consensus 506 f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~ 571 (808)
+...+.++ .+.+|++|+|.|.+ .+.|.+.|.|+|++ ..+ ....|+.+...++..+|.|.+++.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (242)
T 2znx_A 4 LTQSPATL-SVTPGNSVSLSCRA--SQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (242)
T ss_dssp EEEECSEE-EECTTCCEEEEEEE--SSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EEEcCCeE-EEcCCCcEEEEEEe--CCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCCh
Confidence 33444443 58899999999999 78889999999953 211 124577776666777999999999
Q ss_pred CCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 572 EDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
+|+|.|.|.|.|..+.. ...+.|.|...+....... -...+|.+...... ..+.+
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~-~~v~~ 136 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGS-----------------------GGGGSDIQLQESGP-SLVKP 136 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC--------------------------------------CCEEEEECC-SEECT
T ss_pred HHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccc-----------------------cccccceeeecCCc-ceecC
Confidence 99999999999986532 2335677765432100000 00011223333332 45899
Q ss_pred CceEEEEEEEeeCCCC--CeEEEEEEC--CEEcc----------------CCCcEEEEEe--CCEEEEEEccCCCCCcEE
Q psy2145 651 GQSAHYDCRVVPVGDP--TMRFEWFVN--GVELK----------------MGSRFHVQHD--FGYVTLDITKCVPADSGV 708 (808)
Q Consensus 651 G~~v~l~C~v~~~g~P--~p~i~W~~~--g~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~~~D~G~ 708 (808)
|++++|.|.+ .|.| .+.|.|||+ |..+. ...|+.+..+ ....+|.|.++..+|+|.
T Consensus 137 G~~v~L~C~~--~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 214 (242)
T 2znx_A 137 SQTLSLTCSV--TGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTAT 214 (242)
T ss_dssp TSCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCeEEEEEEE--EccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEE
Confidence 9999999999 6776 589999994 33221 2467777654 356799999999999999
Q ss_pred EEEEEEeC--Ccce
Q psy2145 709 YMCKAINR--AGEA 720 (808)
Q Consensus 709 Y~C~A~N~--~G~~ 720 (808)
|+|.|.|. +|..
T Consensus 215 Y~C~a~~~~~fG~g 228 (242)
T 2znx_A 215 YYCANXDGDYXGQG 228 (242)
T ss_dssp EEEEETTSSCBCCC
T ss_pred EEEeccCCcccCCC
Confidence 99999994 4544
No 271
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.80 E-value=8.7e-20 Score=183.01 Aligned_cols=178 Identities=17% Similarity=0.199 Sum_probs=123.8
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCc-eEEEEeCC--EEe---e---------ccCcEEEEeeCCeEEEEEcccCcCC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNL-KVEWFKNG--RPV---T---------IGHRFRPIHDFGYVALDIIDTIPED 119 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~-~v~W~~~g--~~l---~---------~~~r~~~~~~~~~~~L~I~~~~~~D 119 (808)
.|..+ .+.+|++++|.|.+.+. .+.+ .|.|||++ ..+ . ...|+....+.+..+|.|.+++.+|
T Consensus 25 ~p~~~-~v~~G~~v~L~C~~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 102 (234)
T 2j6e_L 25 QPPSA-SGTPGQRVTISCSGSSS-NIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSED 102 (234)
T ss_dssp CCSCC-CBCTTCEEEEEEECCTT-TTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTT
T ss_pred CCCcE-EeeCCCcEEEEEEecCC-CCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHH
Confidence 37777 89999999999999842 2333 79999963 222 1 1357777666777899999999999
Q ss_pred CeeEEEEEEecCcc---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeec
Q psy2145 120 SGTYTCRAVNLVGF---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIK 196 (808)
Q Consensus 120 ~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~ 196 (808)
+|.|+|.|.|..+. ....+.|.|... ...+|.+...+....+.
T Consensus 103 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~----------------------------------~~~~p~v~~~~~~~~~~ 148 (234)
T 2j6e_L 103 EADYYCATWDDSLSAVIFGGGTKLTVLGQ----------------------------------PKAAPSVTLFPPSSEEL 148 (234)
T ss_dssp CSEEEEEEEETTTTEEEECCCBCCCBCCC----------------------------------CCCCCCCCEECCCHHHH
T ss_pred CEEEEEEEEcCCcceeEecCCEEEEEecC----------------------------------CCCCCcccccCCChhHh
Confidence 99999999998772 112233433211 02466666555444455
Q ss_pred CCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE--EEecCc----eEEEEEccCCCCCcEEEEEEEEeCceeEEE
Q psy2145 197 EGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT--ETNNFG----FVALDIMQCLPEDSGVYTCRAVNALGQAVT 269 (808)
Q Consensus 197 ~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~--~~~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~ 269 (808)
+|+.++|.|.+.+ ..|. +.|.|+|||..+..+.... ....++ ...|.|.++..+|+|.|+|.|.|..+....
T Consensus 149 ~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~ 227 (234)
T 2j6e_L 149 QANKATLVCLISD-FFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEK 227 (234)
T ss_dssp TTSCCCEEECCCB-CSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCE
T ss_pred cCCceEEEEEEEE-EcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEE
Confidence 7999999999953 2343 5999999999986542110 011111 247999999999999999999998776443
No 272
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.80 E-value=2.3e-19 Score=154.48 Aligned_cols=96 Identities=29% Similarity=0.518 Sum_probs=88.1
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.+|.|...+.+ ..+.+|+.+.|.|.+ .|+|.|.|.|+|||+.|..+.++.+..+++.++|.|.++..+|+|.|+|.|
T Consensus 12 ~pP~f~~~p~~-~~v~~G~~~~l~C~~--~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 88 (107)
T 3knb_B 12 SPPCFLRFPRP-VRVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCCc-EEEeCCCcEEEEEEE--EEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEE
Confidence 35888887764 689999999999999 799999999999999999999999999999999999999999999999999
Q ss_pred EeCCcceEEEEEEEEEeCC
Q psy2145 714 INRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~~p 732 (808)
+|.+|.+++++.|.|..+|
T Consensus 89 ~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 89 RNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp EETTEEEEEEEEEEEEC--
T ss_pred EECCCEEEEEEEEEEEcCC
Confidence 9999999999999999875
No 273
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.80 E-value=7.7e-19 Score=178.27 Aligned_cols=179 Identities=21% Similarity=0.316 Sum_probs=126.4
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCC-----CcEEEEEECC--Eec------------CCCCCeEEEeeCcEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-----TLKVEWFRNE--KPL------------EDSSRITTKHDFGYVA 563 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-----~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~ 563 (808)
.+.+...+..+ .+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+ ....|+.....++..+
T Consensus 34 ~~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 110 (252)
T 3bkj_L 34 DVLMTQTPLSL-PVNLGEQASISCRS--SQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFT 110 (252)
T ss_dssp CCCEEEECSEE-EECTTSCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEE
T ss_pred ccEEEeCCceE-EEeCCCcEEEEEEc--CCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEE
Confidence 34455545554 68999999999999 7887 6899999964 111 1135777776777789
Q ss_pred EEECCCCCCCCEEEEEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec
Q psy2145 564 MDLSHVRAEDEGIYICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL 642 (808)
Q Consensus 564 L~I~~v~~~D~G~Y~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~ 642 (808)
|.|.+++.+|+|.|.|.|.|..+... ....|.|.... .+|.+....
T Consensus 111 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~P~v~~~~ 157 (252)
T 3bkj_L 111 LRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRAD---------------------------------AAPTVSIFP 157 (252)
T ss_dssp EEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCC---------------------------------BCCEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCC---------------------------------cCcEEEEeC
Confidence 99999999999999999999866322 22456664311 136665543
Q ss_pred CCCccccCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEE--EE-EeCC----EEEEEEccCCCCCcEEEEEEE
Q psy2145 643 TGTSEIMEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFH--VQ-HDFG----YVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 643 ~~~~~v~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~--~~-~~~~----~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.. ..+.+|+.++|.|.+ .| .|.+ .|.|+|||+.+..+.... .. ..++ .+.|.|..+..+|+|.|+|.|
T Consensus 158 ~~-~~~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a 234 (252)
T 3bkj_L 158 PS-SEQLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEA 234 (252)
T ss_dssp CC-HHHHHHTEEEEEEEE--EEEBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEE
T ss_pred CC-hhhcCCCcEEEEEEE--eeEeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEE
Confidence 33 234579999999999 56 4554 899999999887541110 10 0111 247999999999999999999
Q ss_pred EeCCcce
Q psy2145 714 INRAGEA 720 (808)
Q Consensus 714 ~N~~G~~ 720 (808)
.|.....
T Consensus 235 ~n~~~~~ 241 (252)
T 3bkj_L 235 THKTSTS 241 (252)
T ss_dssp ECTTCSS
T ss_pred EeCCCCC
Confidence 9987664
No 274
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.80 E-value=1.1e-18 Score=177.42 Aligned_cols=202 Identities=15% Similarity=0.178 Sum_probs=131.2
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Ee----------eccCcEEEE--eeCCeEEEEEcc
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PV----------TIGHRFRPI--HDFGYVALDIID 114 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l----------~~~~r~~~~--~~~~~~~L~I~~ 114 (808)
+...|..+ .+.+|++|+|.|.+.+ .|.+.|.|||.. . .+ ....|+.+. ...+..+|.|.+
T Consensus 6 v~q~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 6 VTQPDARV-TVSEGASLQLRCKYSY--SATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp EECSCSEE-EEETTSCEEECCEEEC--SSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred EEecCceE-EecCCCeEEEEEEeCC--CCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 34556677 8999999999999984 688899999832 1 11 124466653 335667899999
Q ss_pred cCcCCCeeEEEEEEecCcce----EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec
Q psy2145 115 TIPEDSGTYTCRAVNLVGFA----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL 190 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 190 (808)
++.+|+|.|+|.|.|..+.. ...+.|.|.......... . ...........+|.+...+
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~-----------------~-~~~~~~~~~~~~~~v~~~p 144 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGG-----------------G-SGGGGSGGGGSEAAVTQSP 144 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------------------------CCEEESC
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCC-----------------C-cCcccCCCCcCccEEEecC
Confidence 99999999999999876522 224567665310000000 0 0000000113577888888
Q ss_pred CceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EEc---c------------CCCceEEEe-cCceEEEEEccCCCCC
Q psy2145 191 KNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VPI---K------------SGSRFTETN-NFGFVALDIMQCLPED 252 (808)
Q Consensus 191 ~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~l---~------------~~~~~~~~~-~~~~~~L~I~~~~~~D 252 (808)
....+.+|++|+|.|.+. +. .+.+.|||++ ..+ . ...++.... .....+|.|.+++.+|
T Consensus 145 ~~~~v~~G~~v~L~C~~~--~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 221 (256)
T 3tf7_C 145 RNKVTVTGENVTLSCRQT--NS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQ 221 (256)
T ss_dssp SEEEEETTCCEEECEEEC--SC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGG
T ss_pred CEEEEeCCCcEEEEEEcC--CC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHH
Confidence 888899999999999994 44 6689999832 111 0 123333332 2344589999999999
Q ss_pred cEEEEEEEEeCceeEEE--EEEEEEee
Q psy2145 253 SGVYTCRAVNALGQAVT--SGNLLVHS 277 (808)
Q Consensus 253 ~G~Y~C~a~n~~g~~~~--~~~l~V~~ 277 (808)
+|.|+|.|.|..|.... -..|.|..
T Consensus 222 sG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 222 TSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp CEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CEEEEEEecCCCCccEECCCeEEEEEc
Confidence 99999999998775432 35677764
No 275
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.80 E-value=2e-19 Score=178.68 Aligned_cols=174 Identities=16% Similarity=0.194 Sum_probs=117.3
Q ss_pred cccCCCceEEEEEEeeCCCCCc---EEEEEECCEecCC----------------CCCeEEE-------eeCcEEEEEECC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL---KVEWFRNEKPLED----------------SSRITTK-------HDFGYVAMDLSH 568 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~---~v~W~k~g~~l~~----------------~~~~~~~-------~~~~~~~L~I~~ 568 (808)
.+..|++|+|.|.+ .+.|.+ .|+|+|++..+.. ..+.... ...+..+|.|.+
T Consensus 12 ~~~~G~~v~L~C~~--~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 89 (225)
T 4fmk_A 12 RGRLGGTVELPCHL--LPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRG 89 (225)
T ss_dssp EEETTSCEEECCEE--CSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECS
T ss_pred EEecCCCEEEEEEE--ECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEcc
Confidence 47789999999999 676665 4899998754310 1111111 112234799999
Q ss_pred CCCCCCEEEEEEEEeCCeeEEEEE-EEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 569 VRAEDEGIYICKATNALGEAVTTA-SMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~~s~-~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
++.+|+|.|+|.|.|..|...... .+.+... |.+..... ...
T Consensus 90 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~-~~~ 132 (225)
T 4fmk_A 90 LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQ------------------------------------PENHAEAQ-EVT 132 (225)
T ss_dssp CCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC------------------------------------CEEEEEEC-CBC
T ss_pred CCHHHCcceEEEEEeCCCcceeeeeeeeeecC------------------------------------Cceeeccc-cee
Confidence 999999999999999877655543 3334332 32222222 234
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCC---EEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFG---YVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
...++.+.+.|.+. .+.|++.+.|+++|..+..........++. .+.|.|.++..+|+|.|+|.|+|.+|....++
T Consensus 133 ~~~~~~~~~~c~~~-~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~ 211 (225)
T 4fmk_A 133 IGPQSVAVARCVST-GGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILL 211 (225)
T ss_dssp CSSSCEEEEEEEEE-EEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEE
T ss_pred ecceeeeeeeeeec-CCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEE
Confidence 56677787777764 688999999999987654332222211221 24799999999999999999999999876555
Q ss_pred EEEE
Q psy2145 725 SLKV 728 (808)
Q Consensus 725 ~l~V 728 (808)
.+++
T Consensus 212 ~v~l 215 (225)
T 4fmk_A 212 PVTL 215 (225)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5443
No 276
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.79 E-value=1.4e-18 Score=175.75 Aligned_cols=181 Identities=18% Similarity=0.245 Sum_probs=122.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC-----CceEEEEeC--CEE---ee---------ccCcEEEEeeCCeEEEEEc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS-----NLKVEWFKN--GRP---VT---------IGHRFRPIHDFGYVALDII 113 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p-----~~~v~W~~~--g~~---l~---------~~~r~~~~~~~~~~~L~I~ 113 (808)
...|..+ .+.+|++++|.|.+.+ .| .+.|.|||+ |.. +. ...|+.+..+.+..+|.|.
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 81 (247)
T 1svz_A 5 TQTPLYL-PVSLGDQASISCRSSQ--TIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 81 (247)
T ss_dssp EEECSEE-EECTTCCEEEEEEESS--CCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred EecCCeE-EecCCCCEEEEEeCCC--cccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEEC
Confidence 4457777 8999999999999984 55 689999994 221 11 1467877767777899999
Q ss_pred ccCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCc
Q psy2145 114 DTIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKN 192 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 192 (808)
+++.+|+|.|+|.|.|..+.. ...+.|.|...+..... ......++.+...+..
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~ 136 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGG-------------------------GSGGGGSEVQLQQSGP 136 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC----------------------------------------CCEEEECCC
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCcccccc-------------------------ccccccCceEEeCCCc
Confidence 999999999999999875532 23456776532110000 0000113333444445
Q ss_pred eeecCCCeEEEEEEEeecCC--CCeEEEEeeCC--EEcc-----------------CCCceEEEe--cCceEEEEEccCC
Q psy2145 193 CEIKEGQRAHFECRLIPVSD--NTMKVEWFHNN--VPIK-----------------SGSRFTETN--NFGFVALDIMQCL 249 (808)
Q Consensus 193 ~~v~~G~~v~L~C~~~~~~~--p~~~v~W~~~g--~~l~-----------------~~~~~~~~~--~~~~~~L~I~~~~ 249 (808)
..+.+|++|+|.|.+. +. +.+.+.|||++ ..+. ...++.... ..+..+|.|.+++
T Consensus 137 ~~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 214 (247)
T 1svz_A 137 ELKKPGETVKISCKAT--NYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLK 214 (247)
T ss_dssp EEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCC
T ss_pred eeecCCCcEEEEEEEc--CcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCC
Confidence 5699999999999995 44 35789999953 2110 134555543 3455689999999
Q ss_pred CCCcEEEEEEEEeC
Q psy2145 250 PEDSGVYTCRAVNA 263 (808)
Q Consensus 250 ~~D~G~Y~C~a~n~ 263 (808)
.+|+|.|.|.|.|.
T Consensus 215 ~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 215 NEDTATYFCVRDRH 228 (247)
T ss_dssp GGGCEEEEEEEEEG
T ss_pred hhHCEEEEEEEecc
Confidence 99999999999985
No 277
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.79 E-value=4.1e-19 Score=176.53 Aligned_cols=174 Identities=18% Similarity=0.274 Sum_probs=123.6
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC-------------------CCCCeEEEee--CcEEEEEECCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE-------------------DSSRITTKHD--FGYVAMDLSHV 569 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~-------------------~~~~~~~~~~--~~~~~L~I~~v 569 (808)
.+.+|++++|.|.+ .+.| .+.|.|+|++ ..+. ...|+.+..+ .+..+|.|.++
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (222)
T 1q9r_B 11 LVQSGGSLRLSCAT--SGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTL 88 (222)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred eEcCCCEEEEEEEe--cCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcC
Confidence 58899999999999 5655 6789999853 2110 1356776654 34678999999
Q ss_pred CCCCCEEEEEEEEeCCe-----eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC
Q psy2145 570 RAEDEGIYICKATNALG-----EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG 644 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G-----~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~ 644 (808)
+.+|+|.|.|.|.|..| .....+.|.|...+. .+|.+......
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~i~~~~~~ 136 (222)
T 1q9r_B 89 RAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKT--------------------------------TPPSVYPLAPG 136 (222)
T ss_dssp CGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCC--------------------------------BCCEEEEECCC
T ss_pred CcccCeEEEEEEeccCCcccceEeCCceEEEeccCCC--------------------------------CCCeEEEcccc
Confidence 99999999999999765 222335666654211 23655544332
Q ss_pred CccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEEEEEeCC----EEEEEEccCCCCCcEEEEEEEEeCCc
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFHVQHDFG----YVTLDITKCVPADSGVYMCKAINRAG 718 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G 718 (808)
..+.+|+.++|.|.+ .|. |.| .|.|++||..+... .+......+ .+.|.|..+..+| |.|+|.|.|.+|
T Consensus 137 -~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~ 211 (222)
T 1q9r_B 137 -SAAQTNSMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 211 (222)
T ss_dssp -SCCCCSSEEEEEEEE--EEEBSSCCEEEEGGGTBCTTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred -ccccCCCcEEEEEEE--ccEECCCCEEEEecCCeEcceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCC
Confidence 246789999999999 574 888 99999999876432 111111222 2469999999999 999999999999
Q ss_pred ceEEEEEEE
Q psy2145 719 EAVSSTSLK 727 (808)
Q Consensus 719 ~~~~s~~l~ 727 (808)
.......|.
T Consensus 212 ~~~~~~~i~ 220 (222)
T 1q9r_B 212 STKVDKKIV 220 (222)
T ss_dssp TEEEEEECC
T ss_pred CCcEEEecc
Confidence 877666554
No 278
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.79 E-value=7.5e-19 Score=173.45 Aligned_cols=179 Identities=19% Similarity=0.259 Sum_probs=122.2
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeC-----CCCCceEEEEeCCEE------ee-----------ccCcEEEEee--CCe
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPV-----TDSNLKVEWFKNGRP------VT-----------IGHRFRPIHD--FGY 107 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~-----~~p~~~v~W~~~g~~------l~-----------~~~r~~~~~~--~~~ 107 (808)
.+..|..+ .+.+|++|+|.|.+... +.+.+.+.|||++.. +. ...|+.+..+ .+.
T Consensus 3 ~~~~p~~v-~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 81 (214)
T 2zg1_A 3 ELQVQKSV-TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKN 81 (214)
T ss_dssp EEECCSEE-EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTB
T ss_pred eeeCCcEE-EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCe
Confidence 35567777 89999999999999841 125789999998752 11 1246665443 245
Q ss_pred EEEEEcccCcCCCeeEEEEEEecCcceE----EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCC
Q psy2145 108 VALDIIDTIPEDSGTYTCRAVNLVGFAE----VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQA 183 (808)
Q Consensus 108 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~----~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (808)
.+|.|.+++.+|+|.|+|.+.+..+... ..+.|.|... ..+
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~ 126 (214)
T 2zg1_A 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL-----------------------------------IEK 126 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC-----------------------------------CCC
T ss_pred EEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecC-----------------------------------CCC
Confidence 5899999999999999999998753222 3566777532 224
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeec--CCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEE
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPV--SDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAV 261 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~--~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 261 (808)
|.+.... .+.+|+.++|.|.+.+. +.|.+.+.|++++..+.... . . ....|.|..+..+|+|.|+|.|.
T Consensus 127 p~i~~~~---~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~~~~~-~---~--~~~~L~i~~~~~~~~g~Y~C~a~ 197 (214)
T 2zg1_A 127 PDIHFLE---PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPE-T---T--RSSELTLTPRPEDHGTNLTCQMK 197 (214)
T ss_dssp CEEC--C---CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSSSCSS-C---C--CSSEEEECCCTTCCSCEEEEEEE
T ss_pred CceecCc---cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCccCCCC-c---e--eEEEEEEecccHHcCcEEEEEEE
Confidence 5554322 26799999999998421 24889999999987653221 1 1 12279999999999999999999
Q ss_pred eCceeEEEEEEEEE
Q psy2145 262 NALGQAVTSGNLLV 275 (808)
Q Consensus 262 n~~g~~~~~~~l~V 275 (808)
|..+....+..+.+
T Consensus 198 n~~~~~~~~~~v~l 211 (214)
T 2zg1_A 198 RQGAQVTTERTVQL 211 (214)
T ss_dssp CC----CCEEEEEC
T ss_pred eCCCCcceEEEEEE
Confidence 97665444444443
No 279
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.79 E-value=1.7e-18 Score=174.55 Aligned_cols=182 Identities=16% Similarity=0.228 Sum_probs=123.2
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee---------ccCcEEEEeeCCeEEEEEcccCc
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT---------IGHRFRPIHDFGYVALDIIDTIP 117 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~---------~~~r~~~~~~~~~~~L~I~~~~~ 117 (808)
+...|..+ .+.+|++|+|.|.+. +.|.+.|.|||++ . .+. ...|+.+..+.+..+|.|.+++.
T Consensus 4 v~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (242)
T 2znx_A 4 LTQSPATL-SVTPGNSVSLSCRAS--QSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVET 80 (242)
T ss_dssp EEEECSEE-EECTTCCEEEEEEES--SCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EEEcCCeE-EEcCCCcEEEEEEeC--CCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCCh
Confidence 34557777 899999999999998 4677899999943 1 121 14577776667778999999999
Q ss_pred CCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeec
Q psy2145 118 EDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIK 196 (808)
Q Consensus 118 ~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~ 196 (808)
+|+|.|.|.|.|..+.. ...+.|.|...+..... .. ....++.+...+....+.
T Consensus 81 ~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~------------------------~~-~~~~~~~~~~~~~~~~v~ 135 (242)
T 2znx_A 81 EDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGG------------------------GS-GGGGSDIQLQESGPSLVK 135 (242)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC----------------------------------------CCEEEEECCSEEC
T ss_pred HHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcc------------------------cc-cccccceeeecCCcceec
Confidence 99999999999875432 23456666533210000 00 001123334444456699
Q ss_pred CCCeEEEEEEEeecCCC--CeEEEEeeC--CEEcc----------------CCCceEEEe--cCceEEEEEccCCCCCcE
Q psy2145 197 EGQRAHFECRLIPVSDN--TMKVEWFHN--NVPIK----------------SGSRFTETN--NFGFVALDIMQCLPEDSG 254 (808)
Q Consensus 197 ~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~l~----------------~~~~~~~~~--~~~~~~L~I~~~~~~D~G 254 (808)
+|++|+|.|.+. +.+ .+.+.|+|+ |..+. ...++.+.. .....+|.|.+++.+|+|
T Consensus 136 ~G~~v~L~C~~~--g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 213 (242)
T 2znx_A 136 PSQTLSLTCSVT--GDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTA 213 (242)
T ss_dssp TTSCEEEEEEEE--SSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred CCCeEEEEEEEE--ccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCE
Confidence 999999999994 444 578999994 33221 134555543 234568999999999999
Q ss_pred EEEEEEEeC
Q psy2145 255 VYTCRAVNA 263 (808)
Q Consensus 255 ~Y~C~a~n~ 263 (808)
.|+|.|.|.
T Consensus 214 ~Y~C~a~~~ 222 (242)
T 2znx_A 214 TYYCANXDG 222 (242)
T ss_dssp EEEEEETTS
T ss_pred EEEEeccCC
Confidence 999999883
No 280
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.79 E-value=1.3e-18 Score=176.02 Aligned_cols=172 Identities=17% Similarity=0.268 Sum_probs=114.0
Q ss_pred cccCCCceEEEEEEeeCCCCCcE-----EEEEECCEecCCC--------C-------CeEEE---eeCcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLK-----VEWFRNEKPLEDS--------S-------RITTK---HDFGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~-----v~W~k~g~~l~~~--------~-------~~~~~---~~~~~~~L~I~~v~~ 571 (808)
.+.+|+++.|.|.+ .|.|.+. |.|+|++...... . +..+. ...+..+|.|.+++.
T Consensus 14 ~v~~G~~v~L~C~~--~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 91 (248)
T 3pv7_A 14 ITPLNDNVTIFCNI--FYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQL 91 (248)
T ss_dssp EEETTSCEEECCEE--EESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCG
T ss_pred EEeCCCCEEEeeEE--ecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCH
Confidence 58899999999999 6777665 9999974332110 0 00000 011233599999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|.....+.|.|... |.+..... ..+..|
T Consensus 92 ~D~G~Y~C~~~~~~~~~~~~~~L~V~~~------------------------------------P~v~~~~~--~~~~~~ 133 (248)
T 3pv7_A 92 EEAGEYRCEVVVTPLKAQGTVQLEVVAS------------------------------------PASRLLLD--QVGMKE 133 (248)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEBC------------------------------------CEEEEECC--------
T ss_pred HHCeEEEEEEEeCCccceeEEEEEEecC------------------------------------CceEEecC--CccccC
Confidence 9999999999999999888899999864 33333322 235568
Q ss_pred ceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCc-------EEEEEe-CC----EEEEEEccCCCCCcEEEEEEEEeCC
Q psy2145 652 QSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSR-------FHVQHD-FG----YVTLDITKCVPADSGVYMCKAINRA 717 (808)
Q Consensus 652 ~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~-------~~~~~~-~~----~~~L~I~~v~~~D~G~Y~C~A~N~~ 717 (808)
+.+.|.|.+ .| .|.| .|.|++||..|..+.. ...... .+ .+.|.|.....+|.|.|+|.|.|..
T Consensus 134 ~~~~L~C~~--~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~ 211 (248)
T 3pv7_A 134 NEDKYMCES--SGFYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHAS 211 (248)
T ss_dssp --CEEEEEE--EEEBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTT
T ss_pred CCcEEEEEE--ccEECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCC
Confidence 888999999 57 8988 9999999975542210 011111 11 2579999999999999999999999
Q ss_pred cc--eEEEEEEEE
Q psy2145 718 GE--AVSSTSLKV 728 (808)
Q Consensus 718 G~--~~~s~~l~V 728 (808)
|. .+.++.|.|
T Consensus 212 ~~~~~~~~v~l~V 224 (248)
T 3pv7_A 212 LHTPLRSNFTLTA 224 (248)
T ss_dssp CSSCEEEEECC--
T ss_pred CCCCcEEEEEEEE
Confidence 97 555666777
No 281
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.79 E-value=1.6e-18 Score=176.34 Aligned_cols=190 Identities=17% Similarity=0.252 Sum_probs=123.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee---------ccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT---------IGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~---------~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
+..|..+ .+.+|++|+|.|.+.+...|.+.+.|||++ .. +. ...|+....+.+.++|.|.+++.+
T Consensus 6 v~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (256)
T 3ux9_B 6 LTQPPSV-SGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSE 84 (256)
T ss_dssp CBCCSEE-EECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred EecCCcE-EEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChh
Confidence 4456666 899999999999998522277899999942 21 11 235788777777889999999999
Q ss_pred CCeeEEEEEEecCcce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceee
Q psy2145 119 DSGTYTCRAVNLVGFA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEI 195 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v 195 (808)
|+|.|+|.|.|..+.. ...+.|.|...+........ +. + ........++.+. .+....+
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~------~~-------~----~~~~~~~~~~~~~-~~~~~~v 146 (256)
T 3ux9_B 85 DEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYN------VY-------Y----TKLSSSGSEVQLV-ESGGGLV 146 (256)
T ss_dssp GCEEEEEEEEETTTTEEEECCCEEEEEC---------------------------------------CCEEE-EECCEEE
T ss_pred hCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccce------eE-------E----eecCCCccceeEE-cCCCeEE
Confidence 9999999999865432 23456777543211000000 00 0 0000001122333 3445669
Q ss_pred cCCCeEEEEEEEeecCCC--CeEEEEeeC--CEEc------c-----------CCCceEEEec--CceEEEEEccCCCCC
Q psy2145 196 KEGQRAHFECRLIPVSDN--TMKVEWFHN--NVPI------K-----------SGSRFTETNN--FGFVALDIMQCLPED 252 (808)
Q Consensus 196 ~~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~l------~-----------~~~~~~~~~~--~~~~~L~I~~~~~~D 252 (808)
.+|++++|.|.+. +.+ .+.+.|||+ +..+ . ...++.+..+ .+..+|.|.+++.+|
T Consensus 147 ~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 224 (256)
T 3ux9_B 147 QPGGSLRLSCAAS--GFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 224 (256)
T ss_dssp CTTCCEEEEEEEE--SSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred cCCCeEEEEEEEe--CCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhh
Confidence 9999999999994 444 789999996 3322 1 1235555543 446689999999999
Q ss_pred cEEEEEEEEeC
Q psy2145 253 SGVYTCRAVNA 263 (808)
Q Consensus 253 ~G~Y~C~a~n~ 263 (808)
+|.|+|.|.|.
T Consensus 225 sG~Y~C~~~~~ 235 (256)
T 3ux9_B 225 TAVYYCARYID 235 (256)
T ss_dssp CEEEEEEEEET
T ss_pred CEEEEEEEEcC
Confidence 99999999985
No 282
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.79 E-value=1.4e-19 Score=171.24 Aligned_cols=152 Identities=15% Similarity=0.220 Sum_probs=113.6
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC------------CCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED------------SSRITTKHDFGYVAMDLSHVRAEDEGIYICKAT 582 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~------------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 582 (808)
.+.+|++|+|.|.+ .+ |.+.|.|+|++..+.. ..|+.+....+ +|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~~G~~VtL~c~~--~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~--sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 6 YGVVYGNVTFHVPS--NV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG--SLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEETTCCEEECCCC--SS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTC--CEEECSCCGGGCEEEEEECT
T ss_pred EEEcCCCEEEcCCC--CC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCC--eEEECCCChhhCceEEEEEe
Confidence 57899999999987 44 8899999999875421 12333322233 79999999999999999999
Q ss_pred eCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEee
Q psy2145 583 NALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVP 662 (808)
Q Consensus 583 N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~ 662 (808)
|..| ...+.|.|...+. +|.+...... ..|.|.+
T Consensus 81 n~~~--~~~~~L~V~~~~~---------------------------------~p~i~~~~~~---------~~L~C~~-- 114 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEMVS---------------------------------KPMIYWECSN---------ATLTCEV-- 114 (171)
T ss_dssp TCCS--CEEEEEEEECCCC---------------------------------CCEEEEETTT---------TEEEEEC--
T ss_pred CCCC--cEEEEEEEECcCC---------------------------------CCEEEEecCC---------cEEEEEe--
Confidence 9888 5667888875422 3555433211 2799999
Q ss_pred CCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEE
Q psy2145 663 VGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKV 728 (808)
Q Consensus 663 ~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V 728 (808)
.|.|.|.|.|++||..|....+. .|.+. ...|+|.|+|.|.|.+|..+.++.|.+
T Consensus 115 ~~~p~p~i~W~~~~~~l~~~~~~---------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~c 169 (171)
T 1ccz_A 115 LEGTDVELKLYQGKEHLRSLRQK---------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVNC 169 (171)
T ss_dssp SSCSSCEEEEEETTEEEEEESSS---------EEEEE--CSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred CCCCCcEEEEEECCEECcCCcce---------EEEEe--ccCCCceEEEEEEcccCcccceeEEeC
Confidence 78899999999999998744332 23333 368999999999999999888877643
No 283
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.79 E-value=2e-18 Score=175.74 Aligned_cols=182 Identities=15% Similarity=0.260 Sum_probs=121.4
Q ss_pred cccCCCceEEEEEEeeCCC--CCcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGD--PTLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~--P~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
.+.+|++|+|.|.+ .+. |.+.+.|+|++ ..+ ....++.....++..+|.|.+++.+|+|.|.
T Consensus 13 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 90 (256)
T 3ux9_B 13 SGAPGQRVTISCSG--SSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYY 90 (256)
T ss_dssp EECTTCCEEEEEEC--CTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEE
T ss_pred EEcCCCcEEEEEec--CCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEE
Confidence 58899999999998 565 78899999842 211 1235777777777789999999999999999
Q ss_pred EEEEeCCee---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEE
Q psy2145 579 CKATNALGE---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAH 655 (808)
Q Consensus 579 C~a~N~~G~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~ 655 (808)
|.|.|..|. ....+.|.|...+...... ..+... ........+.+.... ...+.+|++++
T Consensus 91 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~------~~~~~~---------~~~~~~~~~~~~~~~--~~~v~~G~~v~ 153 (256)
T 3ux9_B 91 CQVRDNNENEWVFGGGTKLTVLGSGGSTITS------YNVYYT---------KLSSSGSEVQLVESG--GGLVQPGGSLR 153 (256)
T ss_dssp EEEEETTTTEEEECCCEEEEEC-------------------------------------CCEEEEEC--CEEECTTCCEE
T ss_pred EEEEECCCCceEECCCEEEEEECCCCCcCcc------ceeEEe---------ecCCCccceeEEcCC--CeEEcCCCeEE
Confidence 999997652 2234667776543210000 000000 000000112333332 24588999999
Q ss_pred EEEEEeeCCCC--CeEEEEEEC--CEEc------c-----------CCCcEEEEEe--CCEEEEEEccCCCCCcEEEEEE
Q psy2145 656 YDCRVVPVGDP--TMRFEWFVN--GVEL------K-----------MGSRFHVQHD--FGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 656 l~C~v~~~g~P--~p~i~W~~~--g~~l------~-----------~~~~~~~~~~--~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
|.|.+ .|.| .+.|.|||+ |..+ . ...|+.+..+ ....+|+|.++..+|+|.|+|.
T Consensus 154 L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 231 (256)
T 3ux9_B 154 LSCAA--SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCA 231 (256)
T ss_dssp EEEEE--ESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEE
T ss_pred EEEEE--eCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEE
Confidence 99999 6766 789999996 4322 1 1247877765 4577899999999999999999
Q ss_pred EEeCC
Q psy2145 713 AINRA 717 (808)
Q Consensus 713 A~N~~ 717 (808)
|.|..
T Consensus 232 ~~~~~ 236 (256)
T 3ux9_B 232 RYIDF 236 (256)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99974
No 284
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.79 E-value=9.5e-19 Score=176.89 Aligned_cols=173 Identities=18% Similarity=0.301 Sum_probs=122.4
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEE----------------CCEecCCC---CCeEEEe-eCcEEEEEECCCCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFR----------------NEKPLEDS---SRITTKH-DFGYVAMDLSHVRAEDE 574 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k----------------~g~~l~~~---~~~~~~~-~~~~~~L~I~~v~~~D~ 574 (808)
.+.+|+.|.|.|.+ .+.|.+.|.|+| ++..+... .|+.+.. ..+.++|.|.+++.+|+
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 89 (246)
T 4dzb_B 12 ISKSGTSVKIECRS--LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 89 (246)
T ss_dssp EEETTSCEEEEEEE--SSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEeEe--cCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHC
Confidence 58899999999999 788999999999 44433332 4666554 34567899999999999
Q ss_pred EEEEEEEEeCCe----eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 575 GIYICKATNALG----EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 575 G~Y~C~a~N~~G----~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
|.|.|.|.|..+ .......|.|..... ...+|.+.........+.+
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P~i~~~~~~~~~~~~ 139 (246)
T 4dzb_B 90 SFYICSARTSGDFGEQFFGPGTRLTVLEDLK------------------------------NVFPPEVAVFEPSEAEISH 139 (246)
T ss_dssp EEEEEEECCSSGGGCCEECCCEEEEEESCGG------------------------------GCBCCEEEEECCCHHHHHH
T ss_pred EEEEEEEecCCCCcceEEcCCEEEEEecCCC------------------------------cccCCceEeecCCchhccC
Confidence 999999998754 222345666664211 0124655544444445778
Q ss_pred CceEEEEEEEeeCCCCCe--EEEEEECCEEccCCCcEEEEE--------eCCE---EEEEEccCCCCC-cEEEEEEEEeC
Q psy2145 651 GQSAHYDCRVVPVGDPTM--RFEWFVNGVELKMGSRFHVQH--------DFGY---VTLDITKCVPAD-SGVYMCKAINR 716 (808)
Q Consensus 651 G~~v~l~C~v~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~--------~~~~---~~L~I~~v~~~D-~G~Y~C~A~N~ 716 (808)
|+.++|.|.+ .|.|++ .|.|+|||..|..+.+..... ++.+ +.|.|.....+| .|.|+|.|.|.
T Consensus 140 g~~v~L~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~ 217 (246)
T 4dzb_B 140 TQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 217 (246)
T ss_dssp HSEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred CCcEEEEEEE--ccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEec
Confidence 9999999999 575543 999999999987542221100 1111 358999888888 99999999998
Q ss_pred CcceE
Q psy2145 717 AGEAV 721 (808)
Q Consensus 717 ~G~~~ 721 (808)
.....
T Consensus 218 ~~~~~ 222 (246)
T 4dzb_B 218 GLSEN 222 (246)
T ss_dssp CBCTT
T ss_pred CCCCc
Confidence 76544
No 285
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.9e-18 Score=173.31 Aligned_cols=184 Identities=12% Similarity=0.081 Sum_probs=130.1
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.. .+.+|++|+|.|.+ .+ +...+.|||+|..+...... .........|.|.+++.+|+|.|+|.+
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~--~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQG--NY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEEC--CT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEee--CC-CCcEEEEEECCCcccccccc-ccCCcceeEEEecCCCcccCeEEEEEE
Confidence 457889888877 88999999999998 33 45789999999876421000 001123347999999999999999999
Q ss_pred EeCceeE--EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEE
Q psy2145 261 VNALGQA--VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEAR 338 (808)
Q Consensus 261 ~n~~g~~--~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~ 338 (808)
.|..+.. +..+.|.|... ..+|.+...+ ...+.+|+.++|.|.
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~----------------------------------~~~P~i~~~p-~~~v~~G~~vtL~C~ 124 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEM----------------------------------YDTPTLSVHP-GPEVISGEKVTFYCR 124 (242)
T ss_dssp EETTEECCCCCCEEEEEECC----------------------------------SCCCEEEEES-CSEEETTCEEEEEEE
T ss_pred ecCCccccCCcceEEEeecc----------------------------------cCCCceEccC-CCccCCCCcEEEEEe
Confidence 9875533 34567777541 1245555443 346889999999999
Q ss_pred EeecCCCccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCC--c-ceEEEEEEEEEecc
Q psy2145 339 LIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNEL--G-EAVTSSTLFVESKA 411 (808)
Q Consensus 339 ~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~--g-~~~~~~~l~V~~~~ 411 (808)
+ .+ +.+.+.|+|+|..+.. ..........|.|.++..+|+|.|+|.|.|.. . ..+..+.|.|.+.+
T Consensus 125 ~--~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 125 L--DT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp C--TT-SCSEEEEEECSSSCEE----EEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred c--CC-CCCEEEEEECCCccCc----cccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 7 44 3569999999976653 11122344589999999999999999999864 1 22334778887643
No 286
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.79 E-value=7.5e-18 Score=171.52 Aligned_cols=204 Identities=14% Similarity=0.139 Sum_probs=136.1
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--E---Ec-------------cCCCceEEEec--CceE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--V---PI-------------KSGSRFTETNN--FGFV 241 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~---~l-------------~~~~~~~~~~~--~~~~ 241 (808)
.++..+..+..+.+.+|++|+|.|.+.+...+.+.+.|||.. . .+ ....++.+..+ .+..
T Consensus 7 ~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 86 (257)
T 3gkz_A 7 DKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQV 86 (257)
T ss_dssp --CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEE
T ss_pred CccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceE
Confidence 345555667788899999999999996433467899999932 1 11 11245555532 3566
Q ss_pred EEEEccCCCCCcEEEEEEEEeC----ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCe
Q psy2145 242 ALDIMQCLPEDSGVYTCRAVNA----LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPV 317 (808)
Q Consensus 242 ~L~I~~~~~~D~G~Y~C~a~n~----~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~ 317 (808)
+|.|.+++.+|+|.|+|.|.|. .+.....+.|.|...+.... ........++.
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~-----------------------~~~~~~~~~~~ 143 (257)
T 3gkz_A 87 YLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGG-----------------------GGSGGGGSQIV 143 (257)
T ss_dssp EEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--------------------------------CTTCCCCCC
T ss_pred EEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcc-----------------------cccCCCccceE
Confidence 8999999999999999999996 22233456777764310000 00000112456
Q ss_pred eccCCCceEeecCCeEEEEEEEeecCCCcc-EEEEEEC--CEecc------------CCCcEEEEeeCcEEEEEEccCCC
Q psy2145 318 FTQPMRDIHVAENQAAHFEARLIPVGDSKL-KVTWLRN--GVPIQ------------ASNRVSTMHDFGYVALNFKYTYP 382 (808)
Q Consensus 318 ~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~-~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~ 382 (808)
+...+....+.+|+.++|.|.+ .+.+.+ .+.|+|+ |..+. ...++.....+...+|.|.++..
T Consensus 144 ~~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 221 (257)
T 3gkz_A 144 LTQSPAIMSASPGEKVTLTCSA--SSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEA 221 (257)
T ss_dssp EECSCSEEEECTTCCEEEEEEE--SSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEcCCceEEEeCCCcEEEEEEE--ccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCCh
Confidence 6667777889999999999999 677776 9999993 33221 12566666666777899999999
Q ss_pred CCCeEEEEEEEcCCcceEEE-EEEEEEec
Q psy2145 383 EDSGTYTCRAVNELGEAVTS-STLFVESK 410 (808)
Q Consensus 383 ~d~G~Y~C~a~n~~g~~~~~-~~l~V~~~ 410 (808)
+|+|.|.|.|.|.....-.. +.|.|...
T Consensus 222 ~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~ 250 (257)
T 3gkz_A 222 EDAASYFCHQWSSFPFTFGSGTKLEIKRA 250 (257)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEECCC
T ss_pred HHCEEEEEEEccCCceEEcCCEEEEEEeC
Confidence 99999999998854332222 56666654
No 287
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.79 E-value=3.8e-19 Score=180.51 Aligned_cols=175 Identities=19% Similarity=0.264 Sum_probs=125.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC-----CceEEEEeCC--EE---ee---------ccCcEEEEeeCCeEEEEEc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS-----NLKVEWFKNG--RP---VT---------IGHRFRPIHDFGYVALDII 113 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p-----~~~v~W~~~g--~~---l~---------~~~r~~~~~~~~~~~L~I~ 113 (808)
...|..+ .+.+|++|+|.|.+.+ .| .+.|.|||++ .. +. ...|+.+..+++..+|.|.
T Consensus 38 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 114 (252)
T 3bkj_L 38 TQTPLSL-PVNLGEQASISCRSSQ--SIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRIS 114 (252)
T ss_dssp EEECSEE-EECTTSCEEEEEEESS--CCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred EeCCceE-EEeCCCcEEEEEEcCC--CccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEEC
Confidence 3446777 8999999999999984 45 5899999954 11 11 1357777777778899999
Q ss_pred ccCcCCCeeEEEEEEecCcceE-EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCc
Q psy2145 114 DTIPEDSGTYTCRAVNLVGFAE-VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKN 192 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ 192 (808)
+++.+|+|.|+|.|.|..+... ....|.|... ..+|.+...+..
T Consensus 115 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~P~v~~~~~~ 159 (252)
T 3bkj_L 115 RVEAEDLGVYYCFQASLVPLTFGAGTKLELKRA-----------------------------------DAAPTVSIFPPS 159 (252)
T ss_dssp SCCGGGCEEEEEEECSBSSCEECCCEEEEECCC-----------------------------------CBCCEEEEECCC
T ss_pred CCCcccCEEEEEEEEcCCccEECCCEEEEEeCC-----------------------------------CcCcEEEEeCCC
Confidence 9999999999999998765322 2345666421 246777766555
Q ss_pred eeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE--E-EecCce----EEEEEccCCCCCcEEEEEEEEeCc
Q psy2145 193 CEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT--E-TNNFGF----VALDIMQCLPEDSGVYTCRAVNAL 264 (808)
Q Consensus 193 ~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~--~-~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~ 264 (808)
..+.+|+.++|.|.+.+ ..|. ..|.|+|||..+..+.... . ...++. ..|.|.++..+|+|.|+|.|.|..
T Consensus 160 ~~~~~g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~ 238 (252)
T 3bkj_L 160 SEQLTSGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKT 238 (252)
T ss_dssp HHHHHHTEEEEEEEEEE-EBSSCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTT
T ss_pred hhhcCCCcEEEEEEEee-EeCCCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCC
Confidence 45558999999999964 2344 4899999999886541111 1 112222 359999999999999999999975
Q ss_pred ee
Q psy2145 265 GQ 266 (808)
Q Consensus 265 g~ 266 (808)
..
T Consensus 239 ~~ 240 (252)
T 3bkj_L 239 ST 240 (252)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 288
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.79 E-value=4.1e-19 Score=176.45 Aligned_cols=183 Identities=16% Similarity=0.165 Sum_probs=124.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCC-ceEEEEeCCEEeec----------------cCcEEEE-------eeCCeE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSN-LKVEWFKNGRPVTI----------------GHRFRPI-------HDFGYV 108 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~-~~v~W~~~g~~l~~----------------~~r~~~~-------~~~~~~ 108 (808)
+..|+++ .+..|++|+|.|.+.+...+. ..|.|+|++..+.. ..+.... ...+..
T Consensus 5 V~vp~~V-~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (225)
T 4fmk_A 5 VRVLPEV-RGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDA 83 (225)
T ss_dssp EECCSEE-EEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBC
T ss_pred EEeCCEE-EEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcE
Confidence 3456677 889999999999998522222 25899997754321 1122211 122345
Q ss_pred EEEEcccCcCCCeeEEEEEEecCcceEEEE-EEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 109 ALDIIDTIPEDSGTYTCRAVNLVGFAEVQA-TLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 109 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~-~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
+|.|.+++.+|+|.|+|.|.|..|...... .+.+ ..+|.+.
T Consensus 84 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~ 125 (225)
T 4fmk_A 84 TLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRV--------------------------------------IAQPENH 125 (225)
T ss_dssp CEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEE--------------------------------------EBCCEEE
T ss_pred EEEEccCCHHHCcceEEEEEeCCCcceeeeeeeee--------------------------------------ecCCcee
Confidence 799999999999999999999877554433 3333 2345555
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeCc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNAL 264 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~ 264 (808)
..+.......++.+.+.|.+. .+.|++.+.|++++..+..........++. ...|.|.++..+|+|.|+|+|.|..
T Consensus 126 ~~~~~~~~~~~~~~~~~c~~~-~~~P~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~ 204 (225)
T 4fmk_A 126 AEAQEVTIGPQSVAVARCVST-GGRPPARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHES 204 (225)
T ss_dssp EEECCBCCSSSCEEEEEEEEE-EEBSCCEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTT
T ss_pred ecccceeecceeeeeeeeeec-CCCCCCEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCC
Confidence 556666677888888888875 478889999999887654433222222222 1369999999999999999999988
Q ss_pred eeEEEEEEEEE
Q psy2145 265 GQAVTSGNLLV 275 (808)
Q Consensus 265 g~~~~~~~l~V 275 (808)
|....++.++|
T Consensus 205 ~~~~~~~~v~l 215 (225)
T 4fmk_A 205 FEEPILLPVTL 215 (225)
T ss_dssp CSSCEEEEEEC
T ss_pred CCeEEEEEEEE
Confidence 87655444443
No 289
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.79 E-value=1.5e-18 Score=175.59 Aligned_cols=181 Identities=19% Similarity=0.277 Sum_probs=122.3
Q ss_pred eecCCCcccccCCCceEEEEEEeeCCCC-----CcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEEC
Q psy2145 507 TKPLQNIDAVEEGKNAHFSCRLIPVGDP-----TLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLS 567 (808)
Q Consensus 507 ~~~~~~~~~v~~G~~v~l~C~v~~~g~P-----~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~ 567 (808)
...+.++ .+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+ ....|+.+...++..+|.|.
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 81 (247)
T 1svz_A 5 TQTPLYL-PVSLGDQASISCRS--SQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKIS 81 (247)
T ss_dssp EEECSEE-EECTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEES
T ss_pred EecCCeE-EecCCCCEEEEEeC--CCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEEC
Confidence 3334443 68899999999999 7887 6899999842 211 01457777766777799999
Q ss_pred CCCCCCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 568 HVRAEDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 568 ~v~~~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+++.+|+|.|.|.|.|..+.. ...+.|.|...+..... +. ....+|.+...... .
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~---~~--------------------~~~~~~~~~~~~~~-~ 137 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGG---GS--------------------GGGGSEVQLQQSGP-E 137 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC--------------------------------------CCEEEECCC-E
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEECCcccccc---cc--------------------ccccCceEEeCCCc-e
Confidence 999999999999999986542 22356777653210000 00 00001222222222 3
Q ss_pred cccCCceEEEEEEEeeCCCC--CeEEEEEECC--EEc------c-----------CCCcEEEEEe--CCEEEEEEccCCC
Q psy2145 647 EIMEGQSAHYDCRVVPVGDP--TMRFEWFVNG--VEL------K-----------MGSRFHVQHD--FGYVTLDITKCVP 703 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P--~p~i~W~~~g--~~l------~-----------~~~~~~~~~~--~~~~~L~I~~v~~ 703 (808)
.+.+|++++|.|.+ .|.| .+.|.|||++ ..+ . ...|+.+..+ .+..+|.|.++..
T Consensus 138 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 215 (247)
T 1svz_A 138 LKKPGETVKISCKA--TNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN 215 (247)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG
T ss_pred eecCCCcEEEEEEE--cCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh
Confidence 58899999999999 6764 6799999963 211 0 1457777653 4567999999999
Q ss_pred CCcEEEEEEEEeC
Q psy2145 704 ADSGVYMCKAINR 716 (808)
Q Consensus 704 ~D~G~Y~C~A~N~ 716 (808)
+|+|.|+|.|.|.
T Consensus 216 ~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 216 EDTATYFCVRDRH 228 (247)
T ss_dssp GGCEEEEEEEEEG
T ss_pred hHCEEEEEEEecc
Confidence 9999999999996
No 290
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.79 E-value=1.8e-18 Score=173.81 Aligned_cols=181 Identities=16% Similarity=0.242 Sum_probs=122.4
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEc---------------cCCCceEEEe-cCceEEEEEcc
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPI---------------KSGSRFTETN-NFGFVALDIMQ 247 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l---------------~~~~~~~~~~-~~~~~~L~I~~ 247 (808)
|...+..+.+.+|++|+|.|.. +.|.+.|.|+|+ |..+ ....++.+.. ..+..+|.|.+
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~~---~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 79 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCNQ---TNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILEL 79 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEEE---CSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESS
T ss_pred ceECccceEEeCCCEEEEEeec---CCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEec
Confidence 5566778899999999999994 677889999995 2111 1134555543 23445899999
Q ss_pred CCCCCcEEEEEEEEeCceeE-----EEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCC
Q psy2145 248 CLPEDSGVYTCRAVNALGQA-----VTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM 322 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~g~~-----~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~ 322 (808)
++.+|+|.|+|.|.|..|.. ...+.|.|...+.... + ......+.+...+
T Consensus 80 v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~---------------------p----~~~~~~~~v~~~p 134 (238)
T 2p1y_A 80 ATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAK---------------------K----DAAKKDGQVRQSP 134 (238)
T ss_dssp CCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHH---------------------H----HHHHHHTCCEEEC
T ss_pred CCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCc---------------------C----CcccceeeEEccC
Confidence 99999999999999976531 1235677654220000 0 0000012455556
Q ss_pred CceEeecCCeEEEEEEEeecCCCccEEEEEECC--Ee---c---------cCCCcEEEEe--eCcEEEEEEccCCCCCCe
Q psy2145 323 RDIHVAENQAAHFEARLIPVGDSKLKVTWLRNG--VP---I---------QASNRVSTMH--DFGYVALNFKYTYPEDSG 386 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g--~~---l---------~~~~~~~~~~--~~~~~~L~I~~v~~~d~G 386 (808)
....+.+|+.++|.|.+ .+.|.+.+.|+|++ .. + ....++.+.. ..+..+|.|.++..+|+|
T Consensus 135 ~~~~v~~G~~v~L~C~~--~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G 212 (238)
T 2p1y_A 135 QSLTVWEGETAILNCSY--ENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSA 212 (238)
T ss_dssp SEEEEETTSCEEEEEEC--CCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCE
T ss_pred ceEEEeCCCeEEEEEEE--ecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCE
Confidence 67788999999999998 78888999999964 11 1 1234555542 334568999999999999
Q ss_pred EEEEEEEcCC
Q psy2145 387 TYTCRAVNEL 396 (808)
Q Consensus 387 ~Y~C~a~n~~ 396 (808)
.|+|.|.|..
T Consensus 213 ~Y~C~a~n~~ 222 (238)
T 2p1y_A 213 TYFCAAIDTN 222 (238)
T ss_dssp EEEEEEEETT
T ss_pred EEEEEEeeCC
Confidence 9999999974
No 291
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.79 E-value=2.1e-18 Score=171.00 Aligned_cols=178 Identities=12% Similarity=0.158 Sum_probs=124.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee--------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT--------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~--------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+.....+.|.|||.. . .+. ...|+.+..+ .+.++|.
T Consensus 4 ~~q~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 82 (220)
T 2fbj_H 4 LLESGGG-LVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQ 82 (220)
T ss_dssp EEEECCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEE
T ss_pred EecCCCe-EecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEE
Confidence 3456666 899999999999998421125789999842 2 121 1357777654 4667999
Q ss_pred EcccCcCCCeeEEEEEEecCcc---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGF---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
|.+++.+|+|.|.|.+.|..+. ....+.|.|.... ..+|.+..
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~v~~ 128 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES----------------------------------ARNPTIYP 128 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC----------------------------------CBCCEEEE
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCCC----------------------------------CCCCEEEE
Confidence 9999999999999999987542 1233567665321 24667766
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCC--eEEEEeeCCEEccC-CCceEEEecCce----EEEEEccCCCCCcEEEEEEEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNT--MKVEWFHNNVPIKS-GSRFTETNNFGF----VALDIMQCLPEDSGVYTCRAV 261 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~~~g~~l~~-~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~ 261 (808)
.+ ...+.+|+.++|.|.+.+ ..|. +.|.|+++|..+.. ...... ..++. ..|.|.....+|.|.|+|.|.
T Consensus 129 ~~-~~~~~~g~~v~L~C~~~g-~~P~~~~~v~W~~~~~~~~~~~~~~~~-~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~ 205 (220)
T 2fbj_H 129 LT-LPPALSSDPVIIGCLIHD-YFPSGTMNVTWGKSGKDITTVNFPPAL-ASGGRYTMSNQLTLPAVECPEGESVKCSVQ 205 (220)
T ss_dssp EC-CCSSSCCSSEEEEEEEEE-EBSCCCEEEEESCCCSSCEEEECCCEE-CSSSCEEEEEEEEECGGGSCTTCEEEEEEE
T ss_pred ee-cccccCCCcEEEEEEEEe-EECCCcEEEEEecCCEecceEecCceE-CCCCCEEEEEEEEECHHHcCCCCeEEEEEE
Confidence 55 455789999999999963 3355 89999999987621 011111 12222 258999999999999999999
Q ss_pred eCceeEE
Q psy2145 262 NALGQAV 268 (808)
Q Consensus 262 n~~g~~~ 268 (808)
|..|...
T Consensus 206 n~~~~~~ 212 (220)
T 2fbj_H 206 HDSNPVQ 212 (220)
T ss_dssp ETTSCCE
T ss_pred cCCCceE
Confidence 9887654
No 292
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.79 E-value=1.9e-19 Score=175.97 Aligned_cols=189 Identities=14% Similarity=0.180 Sum_probs=108.4
Q ss_pred CccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEE
Q psy2145 58 SIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQ 137 (808)
Q Consensus 58 ~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~ 137 (808)
++..+.+|++++|.|.+ |.+.|.|||+|..|..+ .....+|.|.+++.+|+|.|+|.+.+. +. ..
T Consensus 11 ~~~~~~~G~~v~L~C~~-----p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~-~s--~~ 75 (204)
T 1sy6_A 11 KVYDYQEDGSVLLTCDA-----EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQN-KS--KP 75 (204)
T ss_dssp EECCCCSSSEEEEEECS-----CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSS-CC--CC
T ss_pred eEEeecCCCeEEEEEcC-----CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCC-CC--ee
Confidence 33345789999999997 45799999999988643 112236999999999999999997543 22 22
Q ss_pred EEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEE
Q psy2145 138 ATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKV 217 (808)
Q Consensus 138 ~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v 217 (808)
+.|.|.......... ..........++.... .......+|.+...+. ....+|++++|.|. +.|.+.|
T Consensus 76 ~~v~v~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~p~-~v~~~G~~v~L~C~----g~p~p~i 143 (204)
T 1sy6_A 76 LQVYYRMGSADDAKK--DAAKKDDAKKDDAKKD-----GSDGNEEMGGITQTPY-KVSISGTTVILTCP----QYPGSEI 143 (204)
T ss_dssp EEEEEEC-------------------------------------------CCCC-EEEEETTEEEEECS----CCCSSCE
T ss_pred EEEEEEEeccccccc--cccccccccccccccc-----cccccccccceecCCc-eeeecCCcEEEEcC----CCCCCce
Confidence 444443100000000 0000000000000000 0000011222322222 22238999999997 4677789
Q ss_pred EEeeCCEEccCCC-ceEEEecCceEEEEEccC-CCCCcEEEEEEEEeCceeE-EEEEEEEE
Q psy2145 218 EWFHNNVPIKSGS-RFTETNNFGFVALDIMQC-LPEDSGVYTCRAVNALGQA-VTSGNLLV 275 (808)
Q Consensus 218 ~W~~~g~~l~~~~-~~~~~~~~~~~~L~I~~~-~~~D~G~Y~C~a~n~~g~~-~~~~~l~V 275 (808)
.|+|||..+.... ...+....+ +|.|.++ +.+|+|.|+|.|.|..|.. +....|.|
T Consensus 144 ~W~k~~~~l~~~~~~~~~~~~~~--~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l~~ 202 (204)
T 1sy6_A 144 LWQHNDKNIGGDEDDKNIGSDED--HLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRA 202 (204)
T ss_dssp EEEETTEEESCCTTCTTEEEETT--EEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEEEE
T ss_pred EEEECCEECCCccCCceEecCCC--EEEEeeCCccccCEEEEEEeccCCCCceeEEEEEEE
Confidence 9999999986532 111221233 8999999 9999999999999999963 33444443
No 293
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=2e-19 Score=180.40 Aligned_cols=173 Identities=16% Similarity=0.236 Sum_probs=120.1
Q ss_pred cccCCCceEEEEEEeeCCCC-Cc-EEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP-TL-KVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P-~~-~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
.+.+|++++|.|.+ .+.+ .+ .|.|+|++ ..+ ....++......+..+|.|.+++.+|+|.|+
T Consensus 30 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 107 (234)
T 2j6e_L 30 SGTPGQRVTISCSG--SSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYY 107 (234)
T ss_dssp CBCTTCEEEEEEEC--CTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEE
T ss_pred EeeCCCcEEEEEEe--cCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEE
Confidence 68999999999998 5644 34 69999963 222 1135777666667779999999999999999
Q ss_pred EEEEeCCee---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEE
Q psy2145 579 CKATNALGE---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAH 655 (808)
Q Consensus 579 C~a~N~~G~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~ 655 (808)
|.|.|..|. ....+.|.|...+ ..+|.+...... ..+.+|+.++
T Consensus 108 C~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------~~~p~v~~~~~~-~~~~~g~~v~ 154 (234)
T 2j6e_L 108 CATWDDSLSAVIFGGGTKLTVLGQP--------------------------------KAAPSVTLFPPS-SEELQANKAT 154 (234)
T ss_dssp EEEEETTTTEEEECCCBCCCBCCCC--------------------------------CCCCCCCEECCC-HHHHTTSCCC
T ss_pred EEEEcCCcceeEecCCEEEEEecCC--------------------------------CCCCcccccCCC-hhHhcCCceE
Confidence 999999873 1122334442211 023554443332 2344689999
Q ss_pred EEEEEeeCCC-CC-eEEEEEECCEEccCCCcEE-EE--EeC---CEEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 656 YDCRVVPVGD-PT-MRFEWFVNGVELKMGSRFH-VQ--HDF---GYVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 656 l~C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~-~~--~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
|.|.+ .|. |. +.|.|+|||+.+..+.... .. .++ ..+.|.|.++..+|+|.|+|.|.|..+....++
T Consensus 155 L~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 229 (234)
T 2j6e_L 155 LVCLI--SDFFPGAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 229 (234)
T ss_dssp EEECC--CBCSSCCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCCCEEE
T ss_pred EEEEE--EEEcCCceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCceEEec
Confidence 99999 665 44 4999999999987542110 00 111 235799999999999999999999988765554
No 294
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.78 E-value=7.2e-18 Score=167.50 Aligned_cols=183 Identities=14% Similarity=0.139 Sum_probs=123.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee--------------ccCcEEEEeeC--CeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT--------------IGHRFRPIHDF--GYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~--------------~~~r~~~~~~~--~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+.....+.|.|||++ . .+. ...|+.+..+. +.++|.
T Consensus 4 v~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (223)
T 1dee_B 4 LVESGGG-VVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQ 82 (223)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEE
T ss_pred EEcCCCE-EEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEE
Confidence 3456677 899999999999998421124789999843 2 121 13577776543 567999
Q ss_pred EcccCcCCCeeEEEEEEecCc---c---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCe
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG---F---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPI 185 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g---~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (808)
|.+++.+|+|.|.|.+.+..| . ....+.|.|.... ..+|.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~ 128 (223)
T 1dee_B 83 MNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS----------------------------------ASAPT 128 (223)
T ss_dssp ECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC----------------------------------CBCCE
T ss_pred ECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCC----------------------------------CCCCE
Confidence 999999999999999998653 1 1123467665311 23565
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEee-CCEEccCCCceE-EEecCc---eEEEEEccCCC--CCcEEEE
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFH-NNVPIKSGSRFT-ETNNFG---FVALDIMQCLP--EDSGVYT 257 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~-~g~~l~~~~~~~-~~~~~~---~~~L~I~~~~~--~D~G~Y~ 257 (808)
+........+.+|+.++|.|.+.+ ..|.+ .|.|++ ||..+.....+. ...++. ...|.|..... +|.|.|+
T Consensus 129 i~~~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~ 207 (223)
T 1dee_B 129 LFPLVSCENSNPSSTVAVGCLAQD-FLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVV 207 (223)
T ss_dssp EEEEECTTCCCSSSEEEEEEEEEE-EBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEE
T ss_pred EEEecCCcccCCCCcEEEEEEEEE-EeCCCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEE
Confidence 554333334679999999999963 33655 999999 998875410000 001111 12588888776 8899999
Q ss_pred EEEEeCceeEEEEE
Q psy2145 258 CRAVNALGQAVTSG 271 (808)
Q Consensus 258 C~a~n~~g~~~~~~ 271 (808)
|.|.|..|......
T Consensus 208 C~v~n~~~~~~~~~ 221 (223)
T 1dee_B 208 CKVQHPNGNKEKDV 221 (223)
T ss_dssp EEEECTTCCEEEEE
T ss_pred EEEEeCCCCCcccc
Confidence 99999888765543
No 295
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.78 E-value=2.8e-18 Score=175.22 Aligned_cols=190 Identities=15% Similarity=0.241 Sum_probs=125.2
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCC------CcEEEEEEC--CEecC------------CCCCeEEEeeCcEEE
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP------TLKVEWFRN--EKPLE------------DSSRITTKHDFGYVA 563 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P------~~~v~W~k~--g~~l~------------~~~~~~~~~~~~~~~ 563 (808)
+.+...+..+ .+.+|++|+|.|.+ .+.| .+.|.|+|+ |..+. ...|+.+....+..+
T Consensus 6 ~~v~q~p~~v-~v~~G~~v~L~C~~--~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (264)
T 2gjj_A 6 IVLTQTPSSL-PVSVGEKVTMTCKS--SQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFT 82 (264)
T ss_dssp CCEEEECSEE-EEETTCCEEEEEEE--SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEecCCeE-EecCCCcEEEEeEc--CCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEE
Confidence 4455555554 68999999999999 7777 678999985 33221 246777766666779
Q ss_pred EEECCCCCCCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec
Q psy2145 564 MDLSHVRAEDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL 642 (808)
Q Consensus 564 L~I~~v~~~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~ 642 (808)
|.|.+++.+|+|.|.|.|.|..+.. ...+.|.|...+...+ +. ..+.. .....+|.+....
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~----~~------------~~~~~--~~~~~~~~~~~~~ 144 (264)
T 2gjj_A 83 LTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSG----GG------------GSGGG--GSGGGGSEVQLQQ 144 (264)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------------------------CCEEEE
T ss_pred EEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccc----cc------------ccccc--ccccccCcEEEeC
Confidence 9999999999999999999986532 2335777775431000 00 00000 0000012222111
Q ss_pred CCCccccCCceEEEEEEEeeCCCCC--eEEEEEEC--CEE---cc--------------CCCcEEEEEe--CCEEEEEEc
Q psy2145 643 TGTSEIMEGQSAHYDCRVVPVGDPT--MRFEWFVN--GVE---LK--------------MGSRFHVQHD--FGYVTLDIT 699 (808)
Q Consensus 643 ~~~~~v~~G~~v~l~C~v~~~g~P~--p~i~W~~~--g~~---l~--------------~~~~~~~~~~--~~~~~L~I~ 699 (808)
.....+.+|++++|.|.+ .|.|. +.|.|||+ |.. |. ...|+.+..+ ....+|.|.
T Consensus 145 ~~~~~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 222 (264)
T 2gjj_A 145 SGPEVVKTGASVKISCKA--SGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLN 222 (264)
T ss_dssp CCCEEECTTCCEEEEEEE--ESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred CCCEEEcCCCcEEEEEEE--eCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEEC
Confidence 122468899999999999 67764 89999996 322 21 1356666543 356799999
Q ss_pred cCCCCCcEEEEEEEEeC
Q psy2145 700 KCVPADSGVYMCKAINR 716 (808)
Q Consensus 700 ~v~~~D~G~Y~C~A~N~ 716 (808)
++..+|+|.|.|.|.|.
T Consensus 223 ~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 223 SLTSEDSADYYCVRSGN 239 (264)
T ss_dssp SCCGGGCEEEEEEEECS
T ss_pred cCCcccCEEEEEEEecC
Confidence 99999999999999996
No 296
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.78 E-value=1.9e-19 Score=178.80 Aligned_cols=181 Identities=15% Similarity=0.209 Sum_probs=126.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCc----eEEEEeCCEEee-------------ccCcEEEEe-----eCCeEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNL----KVEWFKNGRPVT-------------IGHRFRPIH-----DFGYVAL 110 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~----~v~W~~~g~~l~-------------~~~r~~~~~-----~~~~~~L 110 (808)
+..|..+ .+.+|++++|.|.+.+ +.+.+ .|.|+|++.... ...|+.+.. ..+..+|
T Consensus 3 v~~p~~v-~~~~G~~v~L~C~~~~-~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL 80 (221)
T 3eow_R 3 VQAPTQV-PGFLGDSVTLPCYLQV-PNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASL 80 (221)
T ss_dssp CCCCCCC-CCCCSSCCEEECCCCC-CSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEE
T ss_pred EeCCCcE-EEEeCCCEEEEeeecc-CCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceE
Confidence 3456777 8999999999999964 23333 599999864221 145666554 2245689
Q ss_pred EEcccCcCCCeeEEEEEEecC-cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 111 DIIDTIPEDSGTYTCRAVNLV-GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 111 ~I~~~~~~D~G~Y~C~a~n~~-g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
.|.+++.+|+|.|+|.+.|.. |.....+.|.|. .+|.+...
T Consensus 81 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~--------------------------------------~~P~~~~~ 122 (221)
T 3eow_R 81 RMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVL--------------------------------------AKPQNTAE 122 (221)
T ss_dssp ECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCC--------------------------------------CCCEEEEE
T ss_pred EEccCChHHCeEEEEEEEeCCCCceEEEEEEEEE--------------------------------------ECCCceee
Confidence 999999999999999999976 666666677663 35666554
Q ss_pred cCceeecCCCeE-EEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecC---ceEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 190 LKNCEIKEGQRA-HFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNF---GFVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 190 ~~~~~v~~G~~v-~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
+.... .+|+.+ .|.|.+. .+.|.+.|+|++++.............++ ....|.|.++..+|.|.|+|.|.|..+
T Consensus 123 ~~~~~-~~g~~~~~l~C~~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~ 200 (221)
T 3eow_R 123 VQKVQ-LTGEPVPMARCVST-GGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESF 200 (221)
T ss_dssp EECCC-CCSSSCCEEEEEEE-SCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCS
T ss_pred cCCcc-cCCceEEEEEEECC-CccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCC
Confidence 44333 688898 5999985 38888999999975543322111111111 124799999999999999999999887
Q ss_pred eEEEEEEEEE
Q psy2145 266 QAVTSGNLLV 275 (808)
Q Consensus 266 ~~~~~~~l~V 275 (808)
.......|.+
T Consensus 201 ~~~~~~~v~~ 210 (221)
T 3eow_R 201 EKPQLLTVSL 210 (221)
T ss_dssp SSCEEEEECC
T ss_pred CCCeEEEEEE
Confidence 6555544443
No 297
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.78 E-value=5.2e-19 Score=174.04 Aligned_cols=171 Identities=18% Similarity=0.249 Sum_probs=118.7
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEEC--CEecC----------------CCCCeEEEee--CcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRN--EKPLE----------------DSSRITTKHD--FGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~--g~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~~~ 572 (808)
.+.+|++++|.|.+ .+.| .+.|.|+|+ |..+. ...|+.+..+ .+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 88 (210)
T 3d9a_H 11 LVKPSQTLSLTCSV--TGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 88 (210)
T ss_dssp EECTTSCEEEEEEE--ESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEE--ecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCcc
Confidence 58899999999999 5655 488999985 32211 2357776653 34568999999999
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCc
Q psy2145 573 DEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQ 652 (808)
Q Consensus 573 D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~ 652 (808)
|+|.|.|.|.|.. .......|.|...+. .+|.+...... ..+.+|+
T Consensus 89 D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~--------------------------------~~P~v~~~~~~-~~~~~g~ 134 (210)
T 3d9a_H 89 DTATYYCANWDGD-YWGQGTLVTVSAAKT--------------------------------TPPSVYPLAPG-SAAQTNS 134 (210)
T ss_dssp GCEEEEEEETTSS-CBCCCEEEEECCCCC--------------------------------BCCEEEEECCT-TSCCCSS
T ss_pred cCEEEEEEEecCc-ccccceEEEeccCCC--------------------------------CCCEEEEecCC-cccccCC
Confidence 9999999999964 112234566653211 23655544332 3578899
Q ss_pred eEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEEEEEeC---CEEEEEEccCCCCCcEEEEEEEEeCCcceEEEE
Q psy2145 653 SAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFHVQHDF---GYVTLDITKCVPADSGVYMCKAINRAGEAVSST 724 (808)
Q Consensus 653 ~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~ 724 (808)
.++|.|.+ .|. |.| .|.|+++|..+.......+..++ ..+.|.|..+..+| |.|+|.|.|.+|......
T Consensus 135 ~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~ 208 (210)
T 3d9a_H 135 MVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDK 208 (210)
T ss_dssp EEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cEEEEEEE--eeEecCCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCccccc
Confidence 99999999 576 888 99999999865311111111111 13469999998877 999999999999876543
No 298
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.78 E-value=2.3e-18 Score=171.55 Aligned_cols=185 Identities=11% Similarity=0.117 Sum_probs=122.3
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCC--EE---e---e-----------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNG--RP---V---T-----------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g--~~---l---~-----------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++|+|.|.+.+ .+ .+.|.|||++ .. + . ...|+.+..+ .+..+
T Consensus 4 l~qp~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (227)
T 1mju_H 4 LQQPGAE-LVKPGASVKLSCKASG--YTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAY 80 (227)
T ss_dssp EECCSEE-EECTTCCEEEEEEEES--SCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEE
T ss_pred EcCCCCe-EEcCCCCEEEEEEecC--CccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEE
Confidence 4567777 8999999999999984 44 6789999953 22 1 1 1357777654 46779
Q ss_pred EEEcccCcCCCeeEEEEEEecCcc-eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGF-AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
|.|.+++.+|+|.|.|.+.|..+. ....+.|.|.... ..+|.+..
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~v~~ 126 (227)
T 1mju_H 81 MQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK----------------------------------TTAPSVYP 126 (227)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSC----------------------------------CBCCEEEE
T ss_pred EEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCC----------------------------------CCCCEEEE
Confidence 999999999999999999986321 1123467665311 23555554
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccC--CCceEEEecC---ceEEEEEccCCCCCcEEEEEEEEe
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKS--GSRFTETNNF---GFVALDIMQCLPEDSGVYTCRAVN 262 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~--~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n 262 (808)
......+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+.. ..... ..+ ....|.|.++..+| |.|+|.|.|
T Consensus 127 ~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n 202 (227)
T 1mju_H 127 LAPVCGDTSGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAH 202 (227)
T ss_dssp ECCCC------CEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEE
T ss_pred ecCCccccCCCcEEEEEEeec-EeCCCeEEEEecCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEE
Confidence 433345678999999999953 23655 9999999987531 11111 111 12369999998888 999999999
Q ss_pred CceeEEEEEEEEEeeC
Q psy2145 263 ALGQAVTSGNLLVHSK 278 (808)
Q Consensus 263 ~~g~~~~~~~l~V~~~ 278 (808)
..+.......+.+..+
T Consensus 203 ~~~~~~~~~~~~~~~~ 218 (227)
T 1mju_H 203 PASSTKVDKKIEPRGP 218 (227)
T ss_dssp GGGTEEEEEECCCCCC
T ss_pred CCCCcceEEEeCCCCC
Confidence 7776665566655443
No 299
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.78 E-value=1.4e-19 Score=179.71 Aligned_cols=175 Identities=17% Similarity=0.217 Sum_probs=123.0
Q ss_pred cccCCCceEEEEEEeeCCCCCc----EEEEEECCEecCC-------------CCCeEEEe-----eCcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL----KVEWFRNEKPLED-------------SSRITTKH-----DFGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~----~v~W~k~g~~l~~-------------~~~~~~~~-----~~~~~~L~I~~v~~~ 572 (808)
.+.+|+++.|.|.+. .+.+.+ .|.|+|++..... ..|+.+.. ..+..+|.|.+++.+
T Consensus 10 ~~~~G~~v~L~C~~~-~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~ 88 (221)
T 3eow_R 10 PGFLGDSVTLPCYLQ-VPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVE 88 (221)
T ss_dssp CCCCSSCCEEECCCC-CCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCC
T ss_pred EEEeCCCEEEEeeec-cCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChH
Confidence 578999999999983 224433 4999999753211 34555543 223448999999999
Q ss_pred CCEEEEEEEEeCC-eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 573 DEGIYICKATNAL-GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 573 D~G~Y~C~a~N~~-G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
|+|.|+|.+.|.. |.....+.|.|... |.+....... ..+|
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~L~V~~~------------------------------------P~~~~~~~~~--~~~g 130 (221)
T 3eow_R 89 DEGSYTCLFVTFPQGSRSVDIWLRVLAK------------------------------------PQNTAEVQKV--QLTG 130 (221)
T ss_dssp CCSCBEEEEEESSSCSCEEECCCCCCCC------------------------------------CEEEEEEECC--CCCS
T ss_pred HCeEEEEEEEeCCCCceEEEEEEEEEEC------------------------------------CCceeecCCc--ccCC
Confidence 9999999999976 77777777777653 4444333222 2678
Q ss_pred ceE-EEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeC---CEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 652 QSA-HYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF---GYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 652 ~~v-~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
+.+ .|.|.+. .|.|.|.|.|++++.............++ ..+.|.|..+..+|+|.|+|.|.|..+....+..|.
T Consensus 131 ~~~~~l~C~~~-~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 131 EPVPMARCVST-GGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp SSCCEEEEEEE-SCSSCCCEEEECSSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred ceEEEEEEECC-CccCCCeeEEEeCCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 888 4999983 49999999999985543322111111111 245899999999999999999999999876666555
Q ss_pred EE
Q psy2145 728 VK 729 (808)
Q Consensus 728 V~ 729 (808)
+.
T Consensus 210 ~~ 211 (221)
T 3eow_R 210 LT 211 (221)
T ss_dssp CC
T ss_pred EE
Confidence 43
No 300
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.77 E-value=3.7e-18 Score=169.32 Aligned_cols=180 Identities=17% Similarity=0.213 Sum_probs=123.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee----------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT----------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~----------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||++ .. +. ...|+.+..+ .+.++
T Consensus 4 v~~p~~~-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~ 82 (220)
T 1pz5_B 4 VEESGGG-LVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVY 82 (220)
T ss_dssp EEEECCE-EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred EeccCCE-EEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEE
Confidence 3457777 899999999999998421126799999953 21 21 0357776654 35679
Q ss_pred EEEcccCcCCCeeEEEEEEecCcce-E--EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGFA-E--VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~~-~--~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
|.|.+++.+|+|.|+|.+.|..+.. . ..+.|.|.... ..+|.+
T Consensus 83 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i 128 (220)
T 1pz5_B 83 LQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT----------------------------------TTAPSV 128 (220)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC----------------------------------CBCCEE
T ss_pred EEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC----------------------------------CCCCeE
Confidence 9999999999999999999875432 1 34566665311 346666
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEcc--CCCceEEEecC---ceEEEEEccCCCCCcEEEEEEE
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIK--SGSRFTETNNF---GFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~--~~~~~~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
...+....+.+|+.++|.|.+.+ ..|.+ .|.|++++..+. ...... ..+ ....|.|.++..+| |.|+|.|
T Consensus 129 ~~~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~--~~~~~~~~s~L~i~~~~~~~-g~Y~C~a 204 (220)
T 1pz5_B 129 YPLVPGCSDTSGSSVTLGCLVKG-YFPEPVTVKWNYGALSSGVRTVSSVL--QSGFYSLSSLVTVPSSTWPS-QTVICNV 204 (220)
T ss_dssp EEECCCSCCSCSSSEEEEEEEEE-EBSSCCEEEEGGGTCCTTEEECCCEE--ETTEEEEEEEEEECGGGTTT-SCCEEEE
T ss_pred EEcccccccCCCCcEEEEEEEEE-EeCCCeEEEEecCCcccceEEcCCcc--cCCeEEEEEEEEEcchhcCC-ceEEEEE
Confidence 65554555788999999999953 33777 999999887421 011010 111 12368999998866 9999999
Q ss_pred EeCceeEEEEE
Q psy2145 261 VNALGQAVTSG 271 (808)
Q Consensus 261 ~n~~g~~~~~~ 271 (808)
.|..|....++
T Consensus 205 ~n~~~~~~~~~ 215 (220)
T 1pz5_B 205 AHPASKVDLIK 215 (220)
T ss_dssp EEGGGTEEEEE
T ss_pred EECCccEeeee
Confidence 99998655543
No 301
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.77 E-value=1e-18 Score=166.78 Aligned_cols=153 Identities=17% Similarity=0.277 Sum_probs=111.4
Q ss_pred cccCCCceEEEEEEeeCC-CCCcEEEEEEC-CEecC------------CC--CCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVG-DPTLKVEWFRN-EKPLE------------DS--SRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g-~P~~~v~W~k~-g~~l~------------~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
.+.+|++|+|.|.+ .+ .+.+.|.|+|+ +..+. .. .|+.+.... .+|.|.+++.+|+|.|+
T Consensus 10 ~v~~G~~vtL~c~~--~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~--~sL~I~~v~~~D~G~Y~ 85 (180)
T 2dru_A 10 NAITGSNVTLTILK--HPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTN--GALRIYNVSKEDRGDYY 85 (180)
T ss_dssp EEETTSCEEECCCS--SCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTT--CCEEECSCCGGGCEEEE
T ss_pred EEEeCCCEEEeCCC--CCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCC--ccEEEcCCCHHHCeEEE
Confidence 58899999999987 33 34689999994 32221 11 455552222 37999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDC 658 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C 658 (808)
|.+.+.. .....+.|.|...+ .+|.+.. .++.++|.|
T Consensus 86 C~v~~~~-~~~~~~~L~V~~~~---------------------------------~~P~i~~---------~~~~v~L~C 122 (180)
T 2dru_A 86 MRMLHET-EDQWKITMEVYEMV---------------------------------SKPMIYW---------ECSNATLTC 122 (180)
T ss_dssp EEEESSS-EEEEEEEEEEECCC---------------------------------CCCEEEE---------EGGGTEEEE
T ss_pred EEEEcCC-eEEEEEEEEEECCC---------------------------------CCCEEEe---------cCCCEEEEE
Confidence 9998876 66677888887532 1355442 345699999
Q ss_pred EEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEE
Q psy2145 659 RVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLK 727 (808)
Q Consensus 659 ~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~ 727 (808)
.+. .| |.|.|.|++||..|.. ..+ .+|.+.. .+|+|.|+|.|.|.+|..+++..+.
T Consensus 123 ~~~-~g-p~p~i~W~~~~~~l~~-------~~~--~~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i~ 178 (180)
T 2dru_A 123 EVL-EG-TDVELKLYQGKEHLRS-------LRQ--KTMSYQW--TNLRAPFKCKAVNRVSQESEMEVVN 178 (180)
T ss_dssp ECS-SC-TTCEEEEEETTEEEEE-------ESS--SEEEEEC--SCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EeC-CC-CCCEEEEEECCeECcC-------CCC--CEEEEEE--hhcCccEEEEEecCcCccccceeEe
Confidence 983 34 9999999999998861 112 2556633 7899999999999999988776653
No 302
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.77 E-value=6e-18 Score=175.43 Aligned_cols=199 Identities=14% Similarity=0.220 Sum_probs=130.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCC--EE---ee--------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNG--RP---VT--------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g--~~---l~--------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++++|.|.+.+ .+ .+.+.|||++ .. |. ...|+.+..+ .+..+
T Consensus 26 v~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 102 (291)
T 2gki_A 26 LQQSGPE-LVKPGASVKMSCKASG--YTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAY 102 (291)
T ss_dssp EEECCCE-EECTTCCEEEEEEEES--SCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEE
T ss_pred EEcCCcE-EecCCCCEEEEEeccC--CcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEE
Confidence 3456677 8999999999999984 44 5789999952 21 11 1256665543 35679
Q ss_pred EEEcccCcCCCeeEEEEEEecC-cce----EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLV-GFA----EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP 184 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~-g~~----~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (808)
|.|.+++.+|+|.|.|.+.|.. |.. ...+.|.|.......... ..+ .....++
T Consensus 103 L~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~---------------------~~~-~~~~~~~ 160 (291)
T 2gki_A 103 MELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGG---------------------GGS-GGGGSDL 160 (291)
T ss_dssp EEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC--------------------------------------CC
T ss_pred EEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCcccccc---------------------ccC-CCCCccc
Confidence 9999999999999999999874 211 123466665310000000 000 0001245
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCCCe------EEEEeeC--CEEc---c---------CCCceEEEecCceEEEE
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDNTM------KVEWFHN--NVPI---K---------SGSRFTETNNFGFVALD 244 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~------~v~W~~~--g~~l---~---------~~~~~~~~~~~~~~~L~ 244 (808)
.+...+..+.+.+|++++|.|.+ .+.+.+ .+.|||+ |..+ . ...++.........+|.
T Consensus 161 ~v~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~ 238 (291)
T 2gki_A 161 VMSQSPSSLAVSAGEKVTMSCKS--SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLT 238 (291)
T ss_dssp CEECSCSEEEEETTSCEEEEEEE--SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEE
T ss_pred eEEcCCCEEEEcCCCcEEEEEEc--CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEE
Confidence 56666777889999999999999 466654 8999995 3321 1 13466655555566899
Q ss_pred EccCCCCCcEEEEEEEEeCceeEEE-EEEEEEeeC
Q psy2145 245 IMQCLPEDSGVYTCRAVNALGQAVT-SGNLLVHSK 278 (808)
Q Consensus 245 I~~~~~~D~G~Y~C~a~n~~g~~~~-~~~l~V~~~ 278 (808)
|.+++.+|+|.|+|.|.|.....-. -..|.|+..
T Consensus 239 I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~ 273 (291)
T 2gki_A 239 ISSVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHH 273 (291)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred ECCCCHHHCEEEEEEEccCCceEEcCCEEEEEEee
Confidence 9999999999999999996443322 346666653
No 303
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.77 E-value=1.4e-18 Score=175.62 Aligned_cols=179 Identities=17% Similarity=0.244 Sum_probs=124.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe----------------CCEEeecc---CcEEEEe-eCCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK----------------NGRPVTIG---HRFRPIH-DFGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~----------------~g~~l~~~---~r~~~~~-~~~~~~L~I 112 (808)
...|..+ .+.+|++++|.|.+.+ .+.+.|.||| ++..+..+ .|+.+.. ..+.++|.|
T Consensus 5 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I 81 (246)
T 4dzb_B 5 SQHPSWV-ISKSGTSVKIECRSLD--FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTV 81 (246)
T ss_dssp EEECSEE-EEETTSCEEEEEEESS--SCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEE
T ss_pred EECCcEE-EEeCCCcEEEEeEecC--CCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEE
Confidence 3446666 8999999999999984 6888999999 44333332 5777654 356779999
Q ss_pred cccCcCCCeeEEEEEEecCc----ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE-
Q psy2145 113 IDTIPEDSGTYTCRAVNLVG----FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT- 187 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~- 187 (808)
.+++.+|+|.|+|.|.|..+ .....+.|.|..... ...+|.+.
T Consensus 82 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~P~i~~ 129 (246)
T 4dzb_B 82 TSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLK--------------------------------NVFPPEVAV 129 (246)
T ss_dssp CSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGG--------------------------------GCBCCEEEE
T ss_pred CCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCC--------------------------------cccCCceEe
Confidence 99999999999999987643 122345666653110 12355554
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEe-------cCce----EEEEEccCCCCC-cEE
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETN-------NFGF----VALDIMQCLPED-SGV 255 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-------~~~~----~~L~I~~~~~~D-~G~ 255 (808)
..+....+.+|+.++|.|.+.+...+...|.|+|||..|..+....... .++. ..|.|.....+| .|.
T Consensus 130 ~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~ 209 (246)
T 4dzb_B 130 FEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNH 209 (246)
T ss_dssp ECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCE
T ss_pred ecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCe
Confidence 3455566778999999999964222234999999999987543221100 1232 248899888888 999
Q ss_pred EEEEEEeCcee
Q psy2145 256 YTCRAVNALGQ 266 (808)
Q Consensus 256 Y~C~a~n~~g~ 266 (808)
|+|+|.|....
T Consensus 210 YtC~v~~~~~~ 220 (246)
T 4dzb_B 210 FRCQVQFYGLS 220 (246)
T ss_dssp EEEEEEECCBC
T ss_pred EEEEEEecCCC
Confidence 99999996543
No 304
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.77 E-value=7.5e-18 Score=166.96 Aligned_cols=169 Identities=15% Similarity=0.271 Sum_probs=118.9
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--Ee---c--------------CCCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KP---L--------------EDSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~---l--------------~~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|||.. .. + ....|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 88 (220)
T 2fbj_H 11 LVQPGGSLKLSCAA--SGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRS 88 (220)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCG
T ss_pred EecCCCcEEEEEEe--cCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCCh
Confidence 68899999999999 5655 6789999852 21 1 01357777654 4567899999999
Q ss_pred CCCEEEEEEEEeCCee---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccc
Q psy2145 572 EDEGIYICKATNALGE---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEI 648 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 648 (808)
+|+|.|.|.+.|..+. ....+.|.|...+. .+|.+.... ...+
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~v~~~~--~~~~ 134 (220)
T 2fbj_H 89 EDTALYYCARLHYYGYNAYWGQGTLVTVSAESA--------------------------------RNPTIYPLT--LPPA 134 (220)
T ss_dssp GGCEEEEEEEEETTTEEEEECCCEEEEECSSCC--------------------------------BCCEEEEEC--CCSS
T ss_pred hhCEEEEEEEeccccccceecCCEEEEecCCCC--------------------------------CCCEEEEee--cccc
Confidence 9999999999998653 12235666664211 236555433 2357
Q ss_pred cCCceEEEEEEEeeCCC-CC--eEEEEEECCEEccC-CCcEEEEEeCC---EEEEEEccCCCCCcEEEEEEEEeCCcceE
Q psy2145 649 MEGQSAHYDCRVVPVGD-PT--MRFEWFVNGVELKM-GSRFHVQHDFG---YVTLDITKCVPADSGVYMCKAINRAGEAV 721 (808)
Q Consensus 649 ~~G~~v~l~C~v~~~g~-P~--p~i~W~~~g~~l~~-~~~~~~~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~ 721 (808)
.+|+.++|.|.+ .|. |. +.|.|++||..+.. ........++. .+.|.|.....+|+|.|+|.|.|..|...
T Consensus 135 ~~g~~v~L~C~~--~g~~P~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 135 LSSDPVIIGCLI--HDYFPSGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp SCCSSEEEEEEE--EEEBSCCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred cCCCcEEEEEEE--EeEECCCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 889999999999 465 76 89999999987621 00101111111 13699999999999999999999999765
No 305
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.77 E-value=2.5e-18 Score=171.17 Aligned_cols=176 Identities=13% Similarity=0.158 Sum_probs=120.1
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCC--EEee-----------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNG--RPVT-----------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g--~~l~-----------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++|+|.|.+.+ .+ .+.|.|||++ ..+. ...|+.+..+ .+..+
T Consensus 4 l~qp~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (225)
T 1op3_H 4 LVESGGG-LVKAGGSLILSCGVSN--FRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVY 80 (225)
T ss_dssp EEEECCE-EEETTCCEEEEEEEES--SCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEE
T ss_pred EEcCCCe-EecCCCCEEEEEEecC--cccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEE
Confidence 4456677 8999999999999984 44 6789999842 2111 1357777655 45679
Q ss_pred EEEcccCcCCCeeEEEEEEecCc-----c---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccC
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVG-----F---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTT 181 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g-----~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (808)
|.|.+++.+|+|.|.|.+.|..| . ....+.|.|.... .
T Consensus 81 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~ 126 (225)
T 1op3_H 81 LQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS----------------------------------T 126 (225)
T ss_dssp EEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS----------------------------------C
T ss_pred EEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCC----------------------------------C
Confidence 99999999999999999999765 2 1134577775321 2
Q ss_pred CCCeEEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc----eEEEEEccCCCCCcEEE
Q psy2145 182 QAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG----FVALDIMQCLPEDSGVY 256 (808)
Q Consensus 182 ~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~I~~~~~~D~G~Y 256 (808)
.+|.+........+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+...........++ ...|.|.++..+| |.|
T Consensus 127 ~~P~v~~~~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y 204 (225)
T 1op3_H 127 KGPSVFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 204 (225)
T ss_dssp BCCEEEEECCCTTCCCCCEEEEEEEEEE-EBSSCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCC
T ss_pred cCCeEEEecccccccCCCcEEEEEEEEe-EECCCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcE
Confidence 3455544332224678999999999963 33655 999999997642110000111222 1258999998889 999
Q ss_pred EEEEEeCceeE
Q psy2145 257 TCRAVNALGQA 267 (808)
Q Consensus 257 ~C~a~n~~g~~ 267 (808)
+|.|.|..+..
T Consensus 205 ~C~a~n~~~~~ 215 (225)
T 1op3_H 205 ICNVNHKPSNT 215 (225)
T ss_dssp CEEEEEGGGTE
T ss_pred EEEEEcCCCCc
Confidence 99999976543
No 306
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.77 E-value=1.2e-17 Score=169.69 Aligned_cols=205 Identities=15% Similarity=0.155 Sum_probs=131.8
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EE---c----------cCCCceEEE--ecCceEEEEEc
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VP---I----------KSGSRFTET--NNFGFVALDIM 246 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~---l----------~~~~~~~~~--~~~~~~~L~I~ 246 (808)
..+...+..+.+.+|++|+|.|.+ .+.|.+.+.|||.. .. + ....++... ...+..+|.|.
T Consensus 4 ~~v~q~p~~~~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~ 81 (256)
T 3tf7_C 4 QSVTQPDARVTVSEGASLQLRCKY--SYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKA 81 (256)
T ss_dssp CEEECSCSEEEEETTSCEEECCEE--ECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEES
T ss_pred cEEEecCceEEecCCCeEEEEEEe--CCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEEC
Confidence 456667778899999999999999 46688999999832 11 1 113345542 34456789999
Q ss_pred cCCCCCcEEEEEEEEeCcee----EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCC
Q psy2145 247 QCLPEDSGVYTCRAVNALGQ----AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPM 322 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~ 322 (808)
+++.+|+|.|+|.|.|..+. ....+.|.|.......... .+ ..........+|.+...+
T Consensus 82 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~---~~--------------~~~~~~~~~~~~~v~~~p 144 (256)
T 3tf7_C 82 SVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGG---GS--------------GGGGSGGGGSEAAVTQSP 144 (256)
T ss_dssp SCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC--------------------------------------CCEEESC
T ss_pred CCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCC---Cc--------------CcccCCCCcCccEEEecC
Confidence 99999999999999997542 2234567776410000000 00 000000012356677777
Q ss_pred CceEeecCCeEEEEEEEeecCCCccEEEEEECC--Ee---cc------------CCCcEEEEe-eCcEEEEEEccCCCCC
Q psy2145 323 RDIHVAENQAAHFEARLIPVGDSKLKVTWLRNG--VP---IQ------------ASNRVSTMH-DFGYVALNFKYTYPED 384 (808)
Q Consensus 323 ~~~~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g--~~---l~------------~~~~~~~~~-~~~~~~L~I~~v~~~d 384 (808)
....+.+|+.++|.|.+ .+. .+.+.|+|.+ .. +. ...++.... .....+|.|.++..+|
T Consensus 145 ~~~~v~~G~~v~L~C~~--~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 221 (256)
T 3tf7_C 145 RNKVTVTGENVTLSCRQ--TNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQ 221 (256)
T ss_dssp SEEEEETTCCEEECEEE--CSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGG
T ss_pred CEEEEeCCCcEEEEEEc--CCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHH
Confidence 77888899999999998 555 6799999832 11 10 122333322 2234579999999999
Q ss_pred CeEEEEEEEcCCcceEE--EEEEEEEec
Q psy2145 385 SGTYTCRAVNELGEAVT--SSTLFVESK 410 (808)
Q Consensus 385 ~G~Y~C~a~n~~g~~~~--~~~l~V~~~ 410 (808)
+|.|+|.|.|..|...- -+.|.|...
T Consensus 222 sG~Y~C~a~n~~g~~~fG~gt~l~v~~~ 249 (256)
T 3tf7_C 222 TSLYFCASSDAPGQLYFGEGSKLTVLEL 249 (256)
T ss_dssp CEEEEEEEEEETTEEEECCCEEEEEECG
T ss_pred CEEEEEEecCCCCccEECCCeEEEEEcc
Confidence 99999999998775532 266777643
No 307
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.77 E-value=2.7e-18 Score=176.24 Aligned_cols=204 Identities=14% Similarity=0.159 Sum_probs=119.0
Q ss_pred cccccccceeeeccCCCchhhhhhhccCCccceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--CCEE---e
Q psy2145 19 SKKETSYHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--NGRP---V 93 (808)
Q Consensus 19 ~~~ed~g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--~g~~---l 93 (808)
.+..|.+.|.|.+.+..+...... ...+...|..+ .+.+|++++|.|.+. .+.+.|.||| .|.. +
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~------~~~v~~~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~k~~~~~~~~~~ 72 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGG------GMKVIQTPRYL-VKGQGQKAKMRCIPE---KGHPVVFWYQQNKNNEFKFL 72 (270)
T ss_dssp -------------------------------CCCEEECSEE-EEETTSCEEEEEECC---TTCCEEEEEEECTTCCEEEE
T ss_pred chhhhHHHHHHHHhccCCcccccc------ceeEEeCCCeE-EEcCCCCEEEEEEec---CCCceEEEEEECCCCCcEEE
Confidence 467899999999988755433221 12334556667 899999999999986 3667999998 2211 1
Q ss_pred ---------ecc---C-cEEEEe-eCCeEEEEEcccCcCCCeeEEEEEEecCc----ceEEEEEEEEecCCCcccccccc
Q psy2145 94 ---------TIG---H-RFRPIH-DFGYVALDIIDTIPEDSGTYTCRAVNLVG----FAEVQATLQCRGSAGILTSTQNE 155 (808)
Q Consensus 94 ---------~~~---~-r~~~~~-~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g----~~~~~~~l~V~~~~~~~~~~~~~ 155 (808)
..+ . |+.+.. ..+..+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.....
T Consensus 73 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~-------- 144 (270)
T 3qib_D 73 INFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLK-------- 144 (270)
T ss_dssp EEEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCST--------
T ss_pred EEECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccc--------
Confidence 111 1 666553 34567999999999999999999996422 222345666653211
Q ss_pred ccceeeeeeccccccccccccccccCCCCeEEe-ecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceE
Q psy2145 156 TGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT-SLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFT 233 (808)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~ 233 (808)
...+|.+.. .+....+.+|+.++|.|.+.+ ..|.+ .|.|+|||.++..+....
T Consensus 145 ------------------------~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~ 199 (270)
T 3qib_D 145 ------------------------NVFPPEVAVFEPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVCTD 199 (270)
T ss_dssp ------------------------TCBCCEEEEEECCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEEC
T ss_pred ------------------------cccCCceEEECCCccccccCCceEEEEEecc-eeCCCeEEEEEECCEECCCCcccc
Confidence 123565443 445556677999999999963 24544 899999999987543211
Q ss_pred E-------EecCce----EEEEEccCCCCC-cEEEEEEEEeCce
Q psy2145 234 E-------TNNFGF----VALDIMQCLPED-SGVYTCRAVNALG 265 (808)
Q Consensus 234 ~-------~~~~~~----~~L~I~~~~~~D-~G~Y~C~a~n~~g 265 (808)
. ...++. ..|.|.....+| .|.|+|+|.|...
T Consensus 200 ~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 200 PQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp SSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred cccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 0 001221 257888887788 9999999998644
No 308
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.77 E-value=3.7e-18 Score=167.42 Aligned_cols=179 Identities=17% Similarity=0.204 Sum_probs=117.5
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCC-CC-CceEEEEeCCEEeeccCc-EEEEeeC----CeEEEEEcccCcCCCeeEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVT-DS-NLKVEWFKNGRPVTIGHR-FRPIHDF----GYVALDIIDTIPEDSGTYT 124 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~-~p-~~~v~W~~~g~~l~~~~r-~~~~~~~----~~~~L~I~~~~~~D~G~Y~ 124 (808)
++..|.....+.+|++++|.|.+.+.. .| .+.|.|||++..+..... +.....+ ...+|.|.+++.+|+|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 345555441389999999999999632 13 459999999987753210 0000111 1247999999999999999
Q ss_pred EEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEE
Q psy2145 125 CRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFE 204 (808)
Q Consensus 125 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~ 204 (808)
|.|.|..+.......+.+.. ....+|.+...+......+|+.++|.
T Consensus 85 C~a~~~~~~~~~~~~v~~~~----------------------------------~~~~~P~v~~~~~~~~~~~g~~~~L~ 130 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTK----------------------------------GRPKAPQVYTLPPPKEQMAKDKVSLT 130 (207)
T ss_dssp EEEECTTCSSCEEEEECCCC----------------------------------CCCBCCEEEEECCCTGGGSSSEEEEE
T ss_pred EEEEccCCCCceEEEeccCC----------------------------------CCCcCCeEEEeCCCHHHhcCCceEEE
Confidence 99999887543323332100 11457777766655444579999999
Q ss_pred EEEeecCCCC-eEEEEeeCCEEccCCCceE-EEecCce----EEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 205 CRLIPVSDNT-MKVEWFHNNVPIKSGSRFT-ETNNFGF----VALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 205 C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~-~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
|.+.+ ..|. +.|.|+|||.++....... ....+|. ..|.|.....+|.|.|+|.|.|...
T Consensus 131 C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 131 CMITD-FFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEEE-EBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEEee-EECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 99964 2444 5999999999885432111 1123332 2366776667789999999999653
No 309
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.76 E-value=2.7e-18 Score=171.01 Aligned_cols=180 Identities=16% Similarity=0.226 Sum_probs=120.9
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC-----------------CCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE-----------------DSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|||++ ..+. ...|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (227)
T 1mju_H 11 LVKPGASVKLSCKA--SGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTS 88 (227)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEe--cCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCc
Confidence 58899999999999 6666 6889999863 2210 1357776654 3567899999999
Q ss_pred CCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 572 EDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
+|+|.|.|.+.|..+.. ...+.|.|...+. .+|.+...... ..+.+
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~v~~~~~~-~~~~~ 135 (227)
T 1mju_H 89 DDSAVYYCANKLGWFPYWGQGTLVTVSAAKT--------------------------------TAPSVYPLAPV-CGDTS 135 (227)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEECSSCC--------------------------------BCCEEEEECCC-C----
T ss_pred ccCEEEEEEECCCCceEEcCcEEEEEcCCCC--------------------------------CCCEEEEecCC-ccccC
Confidence 99999999999974321 1234666654210 13544433222 24678
Q ss_pred CceEEEEEEEeeCCC-CCe-EEEEEECCEEccC--CCcEEEEEeC---CEEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 651 GQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKM--GSRFHVQHDF---GYVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 651 G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~--~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
|+.++|.|.+ .|. |.+ .|.|++||..+.. ..... ..+ ..+.|.|..+..+| |.|+|.|.|..+.....
T Consensus 136 g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~~~~~~~~~~--~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 210 (227)
T 1mju_H 136 GSSVTLGCLV--KGYFPEPVTLTWNSGSLSSGVHTFPAVL--QSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 210 (227)
T ss_dssp --CEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEE--ETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred CCcEEEEEEe--ecEeCCCeEEEEecCCCcCCcEECCcee--cCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceE
Confidence 9999999999 564 776 9999999987531 11111 111 13479999999888 99999999999888888
Q ss_pred EEEEEEeCCCc
Q psy2145 724 TSLKVKSKSDI 734 (808)
Q Consensus 724 ~~l~V~~~p~~ 734 (808)
..+.+.++|.-
T Consensus 211 ~~~~~~~~p~~ 221 (227)
T 1mju_H 211 KKIEPRGPTIK 221 (227)
T ss_dssp EECCCCCC---
T ss_pred EEeCCCCCCCC
Confidence 88887777643
No 310
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.76 E-value=4.6e-18 Score=168.62 Aligned_cols=169 Identities=21% Similarity=0.381 Sum_probs=120.4
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--Ee---c---C-------------CCCCeEEEee--CcEEEEEECCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KP---L---E-------------DSSRITTKHD--FGYVAMDLSHV 569 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~---l---~-------------~~~~~~~~~~--~~~~~L~I~~v 569 (808)
.+.+|++++|.|.+ .+.| .+.|.|+|++ .. + . ...|+.+..+ .+.++|.|.++
T Consensus 11 ~~~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 88 (220)
T 1pz5_B 11 LVQPGGSMKLSCVA--SGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNL 88 (220)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred EEcCCCeEEEEEEE--cCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccC
Confidence 58899999999999 5665 7889999853 21 1 0 0357776653 35668999999
Q ss_pred CCCCCEEEEEEEEeCCeeE-E--EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 570 RAEDEGIYICKATNALGEA-V--TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G~~-~--~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
+.+|+|.|.|.+.|..|.. . ..+.|.|...+ ..+|.+...... .
T Consensus 89 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------~~~P~i~~~~~~-~ 135 (220)
T 1pz5_B 89 RAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT--------------------------------TTAPSVYPLVPG-C 135 (220)
T ss_dssp CGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC--------------------------------CBCCEEEEECCC-S
T ss_pred CHHHCEEEEEEEecCCcccceECCCEEEEEccCC--------------------------------CCCCeEEEcccc-c
Confidence 9999999999999986432 1 33566665321 123655544332 3
Q ss_pred cccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEcc---C-----CCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 647 EIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELK---M-----GSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINR 716 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~---~-----~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~ 716 (808)
.+.+|+.++|.|.+ .|. |.| .|.|+++|..+. . ...|.+ .+.|.|..+..+| |.|+|.|.|.
T Consensus 136 ~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~~-g~Y~C~a~n~ 207 (220)
T 1pz5_B 136 SDTSGSSVTLGCLV--KGYFPEPVTVKWNYGALSSGVRTVSSVLQSGFYSL-----SSLVTVPSSTWPS-QTVICNVAHP 207 (220)
T ss_dssp CCSCSSSEEEEEEE--EEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEE-----EEEEEECGGGTTT-SCCEEEEEEG
T ss_pred ccCCCCcEEEEEEE--EEEeCCCeEEEEecCCcccceEEcCCcccCCeEEE-----EEEEEEcchhcCC-ceEEEEEEEC
Confidence 46789999999999 576 888 999999987411 0 122222 3479999988866 9999999999
Q ss_pred CcceEEEEEE
Q psy2145 717 AGEAVSSTSL 726 (808)
Q Consensus 717 ~G~~~~s~~l 726 (808)
.|....++.+
T Consensus 208 ~~~~~~~~~~ 217 (220)
T 1pz5_B 208 ASKVDLIKEI 217 (220)
T ss_dssp GGTEEEEEEC
T ss_pred CccEeeeecC
Confidence 9987666543
No 311
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.76 E-value=2e-17 Score=164.23 Aligned_cols=168 Identities=17% Similarity=0.331 Sum_probs=119.2
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--Ee---c--------------CCCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KP---L--------------EDSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~---l--------------~~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.+ .+.|.|||.+ .. + ....|+.+..+ .+.++|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (223)
T 1dee_B 11 VVQPGKSLRLSCAA--SGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRA 88 (223)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCG
T ss_pred EEcCCCcEEEEEEe--cCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCH
Confidence 68999999999999 5655 4789999853 21 1 01357776654 2467899999999
Q ss_pred CCCEEEEEEEEeCCe----e--EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCC
Q psy2145 572 EDEGIYICKATNALG----E--AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGT 645 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G----~--~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~ 645 (808)
+|+|.|.|.+.|..| . ....+.|.|...+. .+|.+......
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~i~~~~~~- 135 (223)
T 1dee_B 89 EDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSA--------------------------------SAPTLFPLVSC- 135 (223)
T ss_dssp GGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCC--------------------------------BCCEEEEEECT-
T ss_pred HHCEEEEEEEeccccCcccceeecCcEEEEEccCCC--------------------------------CCCEEEEecCC-
Confidence 999999999999753 1 11234666653111 23555433222
Q ss_pred ccccCCceEEEEEEEeeCCC-CCe-EEEEEE-CCEEccC---------CCcEEEEEeCCEEEEEEccCCC--CCcEEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVGD-PTM-RFEWFV-NGVELKM---------GSRFHVQHDFGYVTLDITKCVP--ADSGVYMC 711 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~-~g~~l~~---------~~~~~~~~~~~~~~L~I~~v~~--~D~G~Y~C 711 (808)
..+.+|+.++|.|.+ .|. |.| .|.|++ ||..|.. +..|.+ .+.|.|..... +|.|.|+|
T Consensus 136 ~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~~~d~g~y~C 208 (223)
T 1dee_B 136 ENSNPSSTVAVGCLA--QDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAA-----TSQVLLPSKDVAQGTNEHVVC 208 (223)
T ss_dssp TCCCSSSEEEEEEEE--EEEBSSCCEEEEEETTSCBCSCEEECCCEEETTEEEE-----EEEEEEECTTTTSTTCCEEEE
T ss_pred cccCCCCcEEEEEEE--EEEeCCCeEEEeEccCCCccceeEECCccccCCeEEE-----EEEEEEcHHHhccCCCCEEEE
Confidence 246789999999999 565 777 999999 9998854 112221 24688988776 88999999
Q ss_pred EEEeCCcceEEEE
Q psy2145 712 KAINRAGEAVSST 724 (808)
Q Consensus 712 ~A~N~~G~~~~s~ 724 (808)
.|.|..|......
T Consensus 209 ~v~n~~~~~~~~~ 221 (223)
T 1dee_B 209 KVQHPNGNKEKDV 221 (223)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEEeCCCCCcccc
Confidence 9999999876654
No 312
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.76 E-value=9.5e-18 Score=171.22 Aligned_cols=188 Identities=16% Similarity=0.214 Sum_probs=122.5
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCC------CceEEEEeC--CEE---ee---------ccCcEEEEeeCCeEEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDS------NLKVEWFKN--GRP---VT---------IGHRFRPIHDFGYVALD 111 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p------~~~v~W~~~--g~~---l~---------~~~r~~~~~~~~~~~L~ 111 (808)
+...|..+ .+.+|++|+|.|.+.+ .| .+.|.|||+ |.. |. ...|+.+..+.+..+|.
T Consensus 8 v~q~p~~v-~v~~G~~v~L~C~~~~--~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 8 LTQTPSSL-PVSVGEKVTMTCKSSQ--TLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp EEEECSEE-EEETTCCEEEEEEESS--CCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred eEecCCeE-EecCCCcEEEEeEcCC--cccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 34557777 8999999999999984 45 678999994 322 21 14678777667778999
Q ss_pred EcccCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL 190 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~ 190 (808)
|.+++.+|+|.|.|.|.|..+.. ...+.|.|...+..-. .. ..+. ..... ..++.....+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~--------------~~---~~~~-~~~~~-~~~~~~~~~~ 145 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSG--------------GG---GSGG-GGSGG-GGSEVQLQQS 145 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC--------------------------------------CCEEEEC
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccc--------------cc---cccc-ccccc-ccCcEEEeCC
Confidence 99999999999999999875432 2345677764321000 00 0000 00000 0122222333
Q ss_pred CceeecCCCeEEEEEEEeecCCC--CeEEEEeeCC--EE---cc----C----------CCceEEEe--cCceEEEEEcc
Q psy2145 191 KNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHNN--VP---IK----S----------GSRFTETN--NFGFVALDIMQ 247 (808)
Q Consensus 191 ~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~g--~~---l~----~----------~~~~~~~~--~~~~~~L~I~~ 247 (808)
....+.+|++|+|.|.+. +.+ .+.|.|||++ .. +. . ..++.+.. ..+..+|.|.+
T Consensus 146 ~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 223 (264)
T 2gjj_A 146 GPEVVKTGASVKISCKAS--GYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNS 223 (264)
T ss_dssp CCEEECTTCCEEEEEEEE--SSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCEEEcCCCcEEEEEEEe--CCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECc
Confidence 445789999999999994 554 3799999963 21 11 0 23444432 33566899999
Q ss_pred CCCCCcEEEEEEEEeC
Q psy2145 248 CLPEDSGVYTCRAVNA 263 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~ 263 (808)
++.+|+|.|.|.|.|.
T Consensus 224 v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 224 LTSEDSADYYCVRSGN 239 (264)
T ss_dssp CCGGGCEEEEEEEECS
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999995
No 313
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.76 E-value=6.1e-18 Score=168.67 Aligned_cols=180 Identities=14% Similarity=0.188 Sum_probs=120.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCC----ceEEEEeC--CEE---ee-------------ccCcEEEEee--CCeE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSN----LKVEWFKN--GRP---VT-------------IGHRFRPIHD--FGYV 108 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~----~~v~W~~~--g~~---l~-------------~~~r~~~~~~--~~~~ 108 (808)
+..|..+ .+.+|++|+|.|.+.+ .|. +.|.|||+ |.. |. ...|+.+..+ .+..
T Consensus 4 v~qp~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 80 (228)
T 3bae_H 4 LKESGPG-LLKPSQTLSLTCSFSG--FSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMV 80 (228)
T ss_dssp EEEECCS-EECTTCCEEEEEEEES--SCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEE
T ss_pred EeCCCce-eecCCCeEEEEEEEeC--cccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeE
Confidence 3446777 8999999999999984 453 78999984 322 11 1357777654 3567
Q ss_pred EEEEcccCcCCCeeEEEEEEecCc------c---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccc
Q psy2145 109 ALDIIDTIPEDSGTYTCRAVNLVG------F---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEET 179 (808)
Q Consensus 109 ~L~I~~~~~~D~G~Y~C~a~n~~g------~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (808)
+|.|.+++.+|+|.|.|.+.|..| . ....+.|.|....
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~--------------------------------- 127 (228)
T 3bae_H 81 FMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK--------------------------------- 127 (228)
T ss_dssp EEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC---------------------------------
T ss_pred EEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC---------------------------------
Confidence 999999999999999999998764 1 1123567665311
Q ss_pred cCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEE
Q psy2145 180 TTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGV 255 (808)
Q Consensus 180 ~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~ 255 (808)
..+|.+...+....+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+...........+. ...|.|.++..+| |.
T Consensus 128 -~~~P~i~~~~~~~~~~~g~~~~l~C~~~g-~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~ 204 (228)
T 3bae_H 128 -TTAPSVYPLAPVCGDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ES 204 (228)
T ss_dssp -CBCCEEEEECC-----CCSEEEEEEEEEE-EBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SC
T ss_pred -CCCCEEEEecccccccCCCCEEEEEEEcc-EeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-Cc
Confidence 24566655443445678999999999953 33665 999999987642111111111111 2358999988866 99
Q ss_pred EEEEEEeCceeEEEEE
Q psy2145 256 YTCRAVNALGQAVTSG 271 (808)
Q Consensus 256 Y~C~a~n~~g~~~~~~ 271 (808)
|+|.|.|..|......
T Consensus 205 YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 205 ITCNVAHPASSTKVDK 220 (228)
T ss_dssp CEEEEEEGGGTEEEEE
T ss_pred EEEEEEECCCCCCEEE
Confidence 9999999888655443
No 314
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.76 E-value=1.8e-16 Score=152.27 Aligned_cols=239 Identities=15% Similarity=0.223 Sum_probs=164.0
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCC---CceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecC
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDS---NLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLV 131 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p---~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~ 131 (808)
.|... .+..|+.++|+|.+.+ +.| ...++|+|||.++.... ..|.|..+...|+|.|+|.+.+..
T Consensus 8 ~P~~~-~i~~GdsVTLTatVaG-GkP~pspyTYqWyKDG~~IsGaT----------~tLti~s~t~sdSG~YqCvVTDa~ 75 (304)
T 3shs_A 8 QSNKR-CFLAGDGFTLTATVAG-DEPLPSNLTYTWTKDDQPHENNT----------ATLTVADATSENAGSYKVTVQDTD 75 (304)
T ss_dssp EESCS-SBCTTCCEEEEEEEEE-SSSCCCCEEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCc-cccCCCCEEEEEEecC-CCCCCCCceEEEEECCccccCCc----------ceEEeeeccccCCeEEEEEEEECC
Confidence 35555 7899999999999987 677 66899999998865321 169999999999999999999998
Q ss_pred cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE-EeecCceeecCCCeEEEEEEE--e
Q psy2145 132 GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF-TTSLKNCEIKEGQRAHFECRL--I 208 (808)
Q Consensus 132 g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~-~~~~~~~~v~~G~~v~L~C~~--~ 208 (808)
|....+..+.|.... .+.+ ...|.+..+..|..+.|.+.+ .
T Consensus 76 Gcs~tSs~VtVT~~a------------------------------------~l~i~it~P~s~~vssg~sVtL~aTVt~S 119 (304)
T 3shs_A 76 TMTSVESEVFLMEEA------------------------------------ELIVNITEPQHFYVSSQTDVELHATVKFS 119 (304)
T ss_dssp TCCEEECCCEEECBC------------------------------------CEEEEESSCSEEEECSSCCEEEEEEEEET
T ss_pred CCeeeeeeEEEeccC------------------------------------ceeEEecCCCceeccCCCeEEEEEEEecc
Confidence 887766666665321 1122 223455666778899999988 4
Q ss_pred ecCCC-----CeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEE--EEEEEEeeCCcc
Q psy2145 209 PVSDN-----TMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVT--SGNLLVHSKKSI 281 (808)
Q Consensus 209 ~~~~p-----~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~--~~~l~V~~~~~i 281 (808)
+ |.| ..+++|+|||..|.... .|.+......++|.|+|++.|..+.... ++.+.|-.
T Consensus 120 G-GtppA~~~~yTYQWyKngt~IsgAq-----------~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~~~---- 183 (304)
T 3shs_A 120 G-GKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT---- 183 (304)
T ss_dssp T-SCCSSTTCCCEEEEEETTEEEESSS-----------EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEECE----
T ss_pred C-CCCcccCCCceeEEeeCCeEccCcc-----------ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEEEc----
Confidence 2 344 57999999999886433 5778888899999999999998774333 34444322
Q ss_pred cccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEee------cCCCc--cEEEEEE
Q psy2145 282 QTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIP------VGDSK--LKVTWLR 353 (808)
Q Consensus 282 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~------~g~p~--~~v~W~~ 353 (808)
.++-........+..|+.+.|.-.+.. .|.|. .++.||.
T Consensus 184 ---------------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (304)
T 3shs_A 184 ---------------------------------MNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYL 230 (304)
T ss_dssp ---------------------------------EEEEECCCSEEEEETTSCEEECCEEEEECCSCCTTCCEEEEEEEEEE
T ss_pred ---------------------------------cccchhheEeehhhcCcEEEEEEEEeeccccCCCCCCceEEEEEEEE
Confidence 111111223456777888887665521 24454 4577886
Q ss_pred --CCEecc----C-----CCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEE
Q psy2145 354 --NGVPIQ----A-----SNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAV 393 (808)
Q Consensus 354 --~g~~l~----~-----~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~ 393 (808)
.|+.-+ . -..+.+..++ .|.-.....+|...|.|.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 3shs_A 231 QREGQLSPTLIGSEVGEALEGFSITPDG---HLFKESATYDDTAKFWCVAK 278 (304)
T ss_dssp ECTTCCSCEEEESSSEECGGGEEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred eecCccCchhhhhhhhhhhccceeCCCc---ceeecccccccchheeeHHH
Confidence 333211 0 1345555554 37777888899999999985
No 315
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.76 E-value=1.5e-16 Score=187.48 Aligned_cols=352 Identities=14% Similarity=0.147 Sum_probs=215.7
Q ss_pred cCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCC-CcEEEEEEEEeCceeEEEEEEEE
Q psy2145 196 KEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPE-DSGVYTCRAVNALGQAVTSGNLL 274 (808)
Q Consensus 196 ~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~-D~G~Y~C~a~n~~g~~~~~~~l~ 274 (808)
..+..+.|.|.+ .|.|.+.+.|.|+|..+..-.+ ..|.|..+... ..+.|.|.+.|..|..... .+.
T Consensus 89 ~~~g~l~v~c~~--~g~P~p~i~W~k~g~~~~~~~~---------~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~-~v~ 156 (731)
T 2v5y_A 89 SPPGLLNVYVKV--NNGPLGNPIWNISGDPTRTWNR---------AELAISTFWPNFYQVIFEVITSGHQGYLAID-EVK 156 (731)
T ss_dssp SCSEEEEEEEEE--TTCCCCSEEEEECCCCCSSCEE---------EEEEECCCTTSCEEEEEEEEECSSCCEEEEC-CBE
T ss_pred CCcceEEEEEec--CCCCccceeEEEeCCcCCceeE---------EEEEEeecCCCceEEEEEEEecCCceEEEEe-eEE
Confidence 445689999999 7899999999999987643211 14666655333 3589999988888865532 222
Q ss_pred EeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCCccEEE-EE-
Q psy2145 275 VHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDSKLKVT-WL- 352 (808)
Q Consensus 275 V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p~~~v~-W~- 352 (808)
+... ....+|.|. .+.+..+.+|+.+.|.|.+ .|.|.+.+. |+
T Consensus 157 ~~~~--------------------------------~~~~~p~~~-~~~~~~v~~G~~v~l~C~~--~g~P~p~i~~W~~ 201 (731)
T 2v5y_A 157 VLGH--------------------------------PCTRTPHFL-RIQNVEVNAGQFATFQCSA--IGRTVAGDRLWLQ 201 (731)
T ss_dssp EESS--------------------------------CCSSSCEEC-CCCCEEEETTSCEEEEEEE--ESCCCTTCEEEEE
T ss_pred eeec--------------------------------ccccccccc-cccceEEeCCCcEEEEEEe--CCCCCCceeEEEe
Confidence 2211 123477777 4557889999999999999 799999988 88
Q ss_pred -ECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcc-eEEEEEEEEEecccccccccchHHHhhhhccc
Q psy2145 353 -RNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGE-AVTSSTLFVESKASLQLDTQNEAALQKIQNLE 430 (808)
Q Consensus 353 -~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~-~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~ 430 (808)
+||..+.......+.......+|.|.++...|+|.|+|.|.|..|. ....+.|.|..+|..+
T Consensus 202 ~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~---------------- 265 (731)
T 2v5y_A 202 GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPI---------------- 265 (731)
T ss_dssp ESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBS----------------
T ss_pred cCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCC----------------
Confidence 7888775433222222223458999999999999999999999998 5556888887654322
Q ss_pred cccccccccceeeeeccCCeeEEecCCCceeecCCceeEecccCCchhhhhcccccCCCCCCCCcCCCCccCCCeeeecC
Q psy2145 431 DTSRFKRKEEEEVEVTQQPSFTVQLNGPTELVEGEGTIITDTQHPKGLEKIRKLEDTEPHKRPEVDDNATKQRPVFTKPL 510 (808)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~f~~~~ 510 (808)
.+ |...
T Consensus 266 ----------------~~-------------------------------------------------------p~~~--- 271 (731)
T 2v5y_A 266 ----------------AP-------------------------------------------------------PQLA--- 271 (731)
T ss_dssp ----------------SC-------------------------------------------------------CEEE---
T ss_pred ----------------CC-------------------------------------------------------ccee---
Confidence 01 1111
Q ss_pred CCcccccCCCceEEEEEEee-CC-CCCc--EEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEE--eC
Q psy2145 511 QNIDAVEEGKNAHFSCRLIP-VG-DPTL--KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKAT--NA 584 (808)
Q Consensus 511 ~~~~~v~~G~~v~l~C~v~~-~g-~P~~--~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~--N~ 584 (808)
......+.|.|...+ .| .|.. .|.|.+.+.. ..... ......+.|.++...+.+.|+|.|. |.
T Consensus 272 -----~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~~~-----~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~ 340 (731)
T 2v5y_A 272 -----SVGATYLWIQLNANSINGDGPIVAREVEYCTASGS-----WNDRQ-PVDSTSYKIGHLDPDTEYEISVLLTRPGE 340 (731)
T ss_dssp -----EECSSCEEEECCCSSBSSCSCCCEEEEEEEESSSS-----CEEEE-ECCSSEEEECSCCTTCEEEEEEEEECSST
T ss_pred -----ccCCceEEEEeCCcccCCCCccEEEEEEEEECCCC-----ceEEe-ccCcceEEEeCCCCCCEEEEEEEEEecCC
Confidence 112346777775410 11 1111 4667654321 11111 1112379999999999999999999 99
Q ss_pred CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCC
Q psy2145 585 LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVG 664 (808)
Q Consensus 585 ~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g 664 (808)
.|....+..+.+...... ...+|..... .......+.|.+.. .+
T Consensus 341 ~G~s~~S~~~~~~t~~~~-----------------------------p~~~P~~~~~-----~~~~~~sv~l~W~~--p~ 384 (731)
T 2v5y_A 341 GGTGSPGPALRTRTKCAD-----------------------------PMRGPRKLEV-----VEVKSRQITIRWEP--FG 384 (731)
T ss_dssp TCSCCBCCCEEEECCCCC-----------------------------CSCCCEEEEE-----EEECSSCEEEEEEC--CC
T ss_pred CccccCCCcEEeeecCCC-----------------------------CCCCCceeEE-----EeccCCeEEEEEEC--CC
Confidence 997765544444432110 0012332211 11224456676654 11
Q ss_pred C-----C--CeEEEEEECCEEccCCCcE---EEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEEeCCCc
Q psy2145 665 D-----P--TMRFEWFVNGVELKMGSRF---HVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 665 ~-----P--~p~i~W~~~g~~l~~~~~~---~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
. + ...|.|...+.... ... .+........+.|.++.+.....|++.|.|..|... +..+.+......
T Consensus 385 ~~~~~~~~~~y~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~ 461 (731)
T 2v5y_A 385 YNVTRCHSYNLTVHYCYQVGGQE--QVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDL 461 (731)
T ss_dssp HHHHCSSSCEEEEEEEEESSSSE--EEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCC
T ss_pred cccccceeeeEEEEEEEccCCCC--ccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCC
Confidence 1 1 23455554321000 000 001112234789999999999999999999999864 666777655443
No 316
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.76 E-value=1.8e-17 Score=169.68 Aligned_cols=178 Identities=19% Similarity=0.283 Sum_probs=120.8
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCC-----CceEEEEeCC--E---Eee---------ccCcEEEEeeCCeEEEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDS-----NLKVEWFKNG--R---PVT---------IGHRFRPIHDFGYVALDI 112 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p-----~~~v~W~~~g--~---~l~---------~~~r~~~~~~~~~~~L~I 112 (808)
+...|..+ .+.+|++++|.|.+.+ .+ .+.|.|||++ . .+. ...|+.+..+.+..+|.|
T Consensus 18 v~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 18 MTQTPLSL-PVSLGDQASISCRSSQ--SLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp EEEECSEE-CCCTTCCEEEEEEESS--CCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred EEeeCCeE-EecCCCCEEEEeEecC--CcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 34457777 8999999999999984 44 5789999842 2 121 246787776777789999
Q ss_pred cccCcCCCeeEEEEEEecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC-------
Q psy2145 113 IDTIPEDSGTYTCRAVNLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP------- 184 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P------- 184 (808)
.+++.+|+|.|.|.+.|..+.. ...+.|.|....... ....+|
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~-----------------------------~p~~pp~~~~~~~ 145 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDA-----------------------------KKDAAKKDDAKKD 145 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC--------------------------------------------------
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCC-----------------------------Ccccccccccccc
Confidence 9999999999999999875432 233456665321100 000111
Q ss_pred -------eEEeecCceeecCCCeEEEEEEEeecCCC--CeEEEEeeC--CEEc-------------------cCCCceEE
Q psy2145 185 -------IFTTSLKNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHN--NVPI-------------------KSGSRFTE 234 (808)
Q Consensus 185 -------~~~~~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~l-------------------~~~~~~~~ 234 (808)
.+...+....+.+|++++|.|.+. +.+ .+.+.|||+ |..+ ....++.+
T Consensus 146 ~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~ 223 (268)
T 1x9q_A 146 DAKKDGGVKLDETGGGLVQPGGAMKLSCVTS--GFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTI 223 (268)
T ss_dssp ---CGGGCEEEEECCEEECTTCCEEEEEEEE--SSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEE
T ss_pred ccccccceEEECCCceEecCCCcEEEEEEec--CccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEE
Confidence 234455677899999999999994 444 478999985 3221 12345555
Q ss_pred Eec--CceEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 235 TNN--FGFVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 235 ~~~--~~~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
..+ .+..+|.|.+++.+|+|.|+|.|.|.
T Consensus 224 ~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 224 SRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 432 23568999999999999999999984
No 317
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.76 E-value=5.2e-18 Score=168.78 Aligned_cols=166 Identities=17% Similarity=0.314 Sum_probs=118.0
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--Eec-----------------CCCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPL-----------------EDSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l-----------------~~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+ ....|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (225)
T 1op3_H 11 LVKAGGSLILSCGV--SNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRV 88 (225)
T ss_dssp EEETTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCG
T ss_pred EecCCCCEEEEEEe--cCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 58899999999999 6666 6889999853 211 11357776654 3567899999999
Q ss_pred CCCEEEEEEEEeCCe-----e---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecC
Q psy2145 572 EDEGIYICKATNALG-----E---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLT 643 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G-----~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~ 643 (808)
+|+|.|.|.+.|..| . ....+.|.|...+. .+|.+.....
T Consensus 89 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~v~~~~~ 136 (225)
T 1op3_H 89 EDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAST--------------------------------KGPSVFPLAP 136 (225)
T ss_dssp GGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSC--------------------------------BCCEEEEECC
T ss_pred hhCEEEEEEEecCCCccccccceeecCCEEEecccCCC--------------------------------cCCeEEEecc
Confidence 999999999999865 2 11235777765211 1355443322
Q ss_pred CCccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccC---------CCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 644 GTSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKM---------GSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 644 ~~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
. ..+.+|+.++|.|.+ .|. |.| .|.|++||..+.. ++.|.+ .+.|.|..+..+| |.|+|.
T Consensus 137 ~-~~~~~g~~v~L~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-g~Y~C~ 207 (225)
T 1op3_H 137 S-SKSTSGGTAALGCLV--KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICN 207 (225)
T ss_dssp C-TTCCCCCEEEEEEEE--EEEBSSCCEEECCTTSCCTTCEECCCEECTTSCEEE-----EEEEEEEGGGTTC-CCCCEE
T ss_pred c-ccccCCCcEEEEEEE--EeEECCCeEEEEecCCCcCCeEecCceeCCCCCEEE-----EEEEEEechhcCC-CcEEEE
Confidence 2 246789999999999 565 776 9999999976421 112221 2469999998889 999999
Q ss_pred EEeCCcceEEE
Q psy2145 713 AINRAGEAVSS 723 (808)
Q Consensus 713 A~N~~G~~~~s 723 (808)
|.|..+.....
T Consensus 208 a~n~~~~~~~~ 218 (225)
T 1op3_H 208 VNHKPSNTKVD 218 (225)
T ss_dssp EEEGGGTEEEE
T ss_pred EEcCCCCccEE
Confidence 99988765433
No 318
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.76 E-value=1.8e-17 Score=164.45 Aligned_cols=176 Identities=14% Similarity=0.159 Sum_probs=120.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEE---e---e-------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRP---V---T-------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~---l---~-------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++|+|.|.+.+...+.+.+.|||. +.. + . ...|+.+..+ .+.++
T Consensus 4 ~~~p~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 82 (221)
T 3m8o_H 4 LVESGGG-LVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAF 82 (221)
T ss_dssp EEEESCE-EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEE
T ss_pred EEccCCE-EEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEE
Confidence 4456667 89999999999999852234679999983 211 1 0 1257777654 46778
Q ss_pred EEEcccCcCCCeeEEEEEEecC--cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLV--GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~--g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
|.|.+++.+|+|.|.|.+.+.. ......+.|.|.... ..+|.+.
T Consensus 83 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~p~v~ 128 (221)
T 3m8o_H 83 LQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS----------------------------------PTSPKVF 128 (221)
T ss_dssp EEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC----------------------------------CBCCEEE
T ss_pred EEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCC----------------------------------CCCCeEE
Confidence 9999999999999999999863 223344566664211 3456665
Q ss_pred -eecCceeecCCCeEEEEEEEeecCCCC--eEEEEeeCCEEccCCCceEEE-ecCce----EEEEEccCCCCCcEEEEEE
Q psy2145 188 -TSLKNCEIKEGQRAHFECRLIPVSDNT--MKVEWFHNNVPIKSGSRFTET-NNFGF----VALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 188 -~~~~~~~v~~G~~v~L~C~~~~~~~p~--~~v~W~~~g~~l~~~~~~~~~-~~~~~----~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+... .+|+.++|.|.+.+ ..|. +.+.|+++|..+......... ..++. ..|.|..+..+|.|.|+|.
T Consensus 129 ~~~~~~~--~~g~~v~L~C~~~~-~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~ 205 (221)
T 3m8o_H 129 PLSLCST--QPDGNVVIACLVQG-FFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCH 205 (221)
T ss_dssp EEECCSC--CCTTEEEEEEEEEE-EBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEE
T ss_pred EecCccc--ccCCCEEEEEEEEe-eECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEE
Confidence 333333 78999999999964 2554 699999999877321111111 11111 2599999999999999999
Q ss_pred EEeCcee
Q psy2145 260 AVNALGQ 266 (808)
Q Consensus 260 a~n~~g~ 266 (808)
|.|..+.
T Consensus 206 v~~~~~~ 212 (221)
T 3m8o_H 206 VKHYTNP 212 (221)
T ss_dssp EEETTSC
T ss_pred EEECCCC
Confidence 9997654
No 319
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.76 E-value=1.1e-17 Score=171.50 Aligned_cols=190 Identities=18% Similarity=0.336 Sum_probs=123.2
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCC-----CcEEEEEECC--EecC------------CCCCeEEEeeCcEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP-----TLKVEWFRNE--KPLE------------DSSRITTKHDFGYVA 563 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P-----~~~v~W~k~g--~~l~------------~~~~~~~~~~~~~~~ 563 (808)
.+.+...+..+ .+.+|++|+|.|.+ .+.| .+.|.|+|++ ..+. ...|+.+...++..+
T Consensus 15 ~~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~ 91 (268)
T 1x9q_A 15 DVVMTQTPLSL-PVSLGDQASISCRS--SQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFT 91 (268)
T ss_dssp CCCEEEECSEE-CCCTTCCEEEEEEE--SSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEE
T ss_pred cceEEeeCCeE-EecCCCCEEEEeEe--cCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEE
Confidence 45555555555 68999999999999 6776 5889999853 2111 246777766667779
Q ss_pred EEECCCCCCCCEEEEEEEEeCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC-----e
Q psy2145 564 MDLSHVRAEDEGIYICKATNALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP-----I 637 (808)
Q Consensus 564 L~I~~v~~~D~G~Y~C~a~N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P-----~ 637 (808)
|.|.+++.+|+|.|.|.|.|..+.. .....|.|...+... .+..|. ........| .
T Consensus 92 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~-~p~~pp-----------------~~~~~~~~~~~~~~v 153 (268)
T 1x9q_A 92 LKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDA-KKDAAK-----------------KDDAKKDDAKKDGGV 153 (268)
T ss_dssp EEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------------------------CGGGC
T ss_pred EEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCC-Cccccc-----------------cccccccccccccce
Confidence 9999999999999999999986532 223566666532100 000000 000000001 1
Q ss_pred EEeecCCCccccCCceEEEEEEEeeCCCCC--eEEEEEEC--CEEc-------------------cCCCcEEEEEeC--C
Q psy2145 638 FTQLLTGTSEIMEGQSAHYDCRVVPVGDPT--MRFEWFVN--GVEL-------------------KMGSRFHVQHDF--G 692 (808)
Q Consensus 638 ~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~--p~i~W~~~--g~~l-------------------~~~~~~~~~~~~--~ 692 (808)
+...+ ....+.+|++++|.|.+ .|.|. +.|.|||+ |..+ ....|+.+..+. .
T Consensus 154 ~~~~~-~~~~v~~G~~v~L~C~~--~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 230 (268)
T 1x9q_A 154 KLDET-GGGLVQPGGAMKLSCVT--SGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKS 230 (268)
T ss_dssp EEEEE-CCEEECTTCCEEEEEEE--ESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGT
T ss_pred EEECC-CceEecCCCcEEEEEEe--cCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCC
Confidence 22222 23578999999999999 67663 89999985 3322 124677776543 4
Q ss_pred EEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 693 YVTLDITKCVPADSGVYMCKAINR 716 (808)
Q Consensus 693 ~~~L~I~~v~~~D~G~Y~C~A~N~ 716 (808)
..+|.|.++..+|+|.|+|.|.|.
T Consensus 231 ~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 231 SVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEEEECCCCHHHCEEEEEEEccC
Confidence 678999999999999999999985
No 320
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.76 E-value=2.2e-18 Score=162.96 Aligned_cols=151 Identities=15% Similarity=0.185 Sum_probs=111.2
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeec------------cCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTI------------GHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~------------~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
.+.+|++|+|.|.+. .|.+.|.|+|++..|.. ..|+.+. ....+|.|.+++.+|+|.|+|.|.
T Consensus 6 ~~~~G~~VtL~c~~~---~~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 6 YGVVYGNVTFHVPSN---VPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD--TVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEETTCCEEECCCCS---SCCSCEEEEETTEEEEEEETTEEEECGGGTTSEEEC--TTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEcCCCEEEcCCCC---CCcceEEEEeCCcEEEEEcCCCcccccccCCcEEEe--CCCCeEEECCCChhhCceEEEEEe
Confidence 678999999999984 37889999999876542 1233332 223379999999999999999999
Q ss_pred ecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEe
Q psy2145 129 NLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLI 208 (808)
Q Consensus 129 n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~ 208 (808)
|..| ...+.|.|... ...|.+...... ..|.|.+
T Consensus 81 n~~~--~~~~~L~V~~~-----------------------------------~~~p~i~~~~~~--------~~L~C~~- 114 (171)
T 1ccz_A 81 NITD--TMKFFLYVLEM-----------------------------------VSKPMIYWECSN--------ATLTCEV- 114 (171)
T ss_dssp TCCS--CEEEEEEEECC-----------------------------------CCCCEEEEETTT--------TEEEEEC-
T ss_pred CCCC--cEEEEEEEECc-----------------------------------CCCCEEEEecCC--------cEEEEEe-
Confidence 8877 66777877643 223555443321 2799999
Q ss_pred ecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEE
Q psy2145 209 PVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLL 274 (808)
Q Consensus 209 ~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~ 274 (808)
.+.|.+.|.|+++|..+....+. .|.+. ...|+|.|+|.|.|..|...+++.|.
T Consensus 115 -~~~p~p~i~W~~~~~~l~~~~~~---------~l~~~--~~~~~g~Y~C~a~N~~~~~~~~~~l~ 168 (171)
T 1ccz_A 115 -LEGTDVELKLYQGKEHLRSLRQK---------TMSYQ--WTNLRAPFKCKAVNRVSQESEMEVVN 168 (171)
T ss_dssp -SSCSSCEEEEEETTEEEEEESSS---------EEEEE--CSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred -CCCCCcEEEEEECCEECcCCcce---------EEEEe--ccCCCceEEEEEEcccCcccceeEEe
Confidence 57788999999999988643322 34443 37889999999999999887776554
No 321
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.76 E-value=2.9e-18 Score=173.54 Aligned_cols=181 Identities=15% Similarity=0.154 Sum_probs=116.3
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCc-----eEEEEeCCEEee--------ccCcEEEE----------eeCCeE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNL-----KVEWFKNGRPVT--------IGHRFRPI----------HDFGYV 108 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~-----~v~W~~~g~~l~--------~~~r~~~~----------~~~~~~ 108 (808)
.+..|..+ .+.+|++++|.|.+.+ .|.+ .|.|+|++.... .+.+.... ...+..
T Consensus 6 ~v~~p~~~-~v~~G~~v~L~C~~~g--~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (248)
T 3pv7_A 6 EMMAGGTQ-ITPLNDNVTIFCNIFY--SQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDA 82 (248)
T ss_dssp ECSTTSEE-EEETTSCEEECCEEEE--SSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBC
T ss_pred EEeCCCCe-EEeCCCCEEEeeEEec--CCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcE
Confidence 34556666 8899999999999984 4444 499999642211 01111110 012344
Q ss_pred EEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 109 ALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 109 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
+|.|.+++.+|+|.|+|.+.|..+.....+.|.|.. +|.+..
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~--------------------------------------~P~v~~ 124 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA--------------------------------------SPASRL 124 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB--------------------------------------CCEEEE
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEec--------------------------------------CCceEE
Confidence 699999999999999999999888878888888853 555555
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCc--------eEEEecCc----eEEEEEccCCCCCcEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSR--------FTETNNFG----FVALDIMQCLPEDSGV 255 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~--------~~~~~~~~----~~~L~I~~~~~~D~G~ 255 (808)
.+. ..+..|+.++|.|.+.+ ..|.+ .|.|+++|..+..+.. .......+ ...|.|.....+|.|.
T Consensus 125 ~~~-~~~~~~~~~~L~C~~~g-~~P~pi~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ 202 (248)
T 3pv7_A 125 LLD-QVGMKENEDKYMCESSG-FYPEAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTV 202 (248)
T ss_dssp ECC---------CEEEEEEEE-EBSSCCEEEEEEECSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCE
T ss_pred ecC-CccccCCCcEEEEEEcc-EECCCeEEEEEECCccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCE
Confidence 554 33456888899999953 36777 9999999975542210 01111122 1368899999999999
Q ss_pred EEEEEEeCcee--EEEEEEEEE
Q psy2145 256 YTCRAVNALGQ--AVTSGNLLV 275 (808)
Q Consensus 256 Y~C~a~n~~g~--~~~~~~l~V 275 (808)
|+|.|.|..+. ...++.|.|
T Consensus 203 YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 203 YQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EEEEEECTTCSSCEEEEECC--
T ss_pred EEEEEECCCCCCCcEEEEEEEE
Confidence 99999998886 444555665
No 322
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.75 E-value=2.4e-17 Score=164.73 Aligned_cols=188 Identities=13% Similarity=0.100 Sum_probs=121.1
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee-------------ccCcEEEEee--CCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT-------------IGHRFRPIHD--FGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~-------------~~~r~~~~~~--~~~~~L~I 112 (808)
+..|..+ .+.+|++++|.|.+.+.....+.+.|||.. . .+. ...|+.+..+ .+.++|.|
T Consensus 4 l~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (232)
T 1dn0_B 4 LQQWGAG-LLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKL 82 (232)
T ss_dssp EEEECCC-EECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCE-EEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEE
Confidence 4456777 899999999999998521235789999842 2 121 1357777654 45779999
Q ss_pred cccCcCCCeeEEEEEEecC--cc----eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 113 IDTIPEDSGTYTCRAVNLV--GF----AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~--g~----~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
.+++.+|+|.|.|.+.+.. +. ....+.|.|.... ..+|.+
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~v 128 (232)
T 1dn0_B 83 SSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS----------------------------------ASAPTL 128 (232)
T ss_dssp CSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC----------------------------------CBCCEE
T ss_pred CCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCC----------------------------------CCCCce
Confidence 9999999999999998421 11 1234567775311 235555
Q ss_pred EeecCceeecCC-CeEEEEEEEeecCCCCe-EEEEee-CCEEccCCCce-EEEecCc---eEEEEEccCCC--CCcEEEE
Q psy2145 187 TTSLKNCEIKEG-QRAHFECRLIPVSDNTM-KVEWFH-NNVPIKSGSRF-TETNNFG---FVALDIMQCLP--EDSGVYT 257 (808)
Q Consensus 187 ~~~~~~~~v~~G-~~v~L~C~~~~~~~p~~-~v~W~~-~g~~l~~~~~~-~~~~~~~---~~~L~I~~~~~--~D~G~Y~ 257 (808)
........+.+| +.++|.|.+.+ ..|.+ .|.|++ ||..+.....+ .....+. ...|.|..... +|.|.|+
T Consensus 129 ~~~~p~~~~~~g~~~v~L~C~~~g-~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~yt 207 (232)
T 1dn0_B 129 FPLVSCENSPSDTSSVAVGCLAQD-FLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVV 207 (232)
T ss_dssp EEEECC------CCSEEEEEEEEE-EBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEE
T ss_pred EEeccccccCCCCCcEEEEEEEEE-EeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEE
Confidence 543222335578 99999999963 34665 999999 99887541000 0011111 13689998887 8999999
Q ss_pred EEEEeCceeEEEEEEEEEe
Q psy2145 258 CRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 258 C~a~n~~g~~~~~~~l~V~ 276 (808)
|.|.|..|.......+.|.
T Consensus 208 C~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 208 CKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp EEEECTTCCEEEEEECCC-
T ss_pred EEEEeCCCCcceeEecCCC
Confidence 9999998877666655543
No 323
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.75 E-value=4.1e-19 Score=177.96 Aligned_cols=178 Identities=19% Similarity=0.296 Sum_probs=102.1
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec------------CCCCCeEEEeeCcEEEEEECC
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL------------EDSSRITTKHDFGYVAMDLSH 568 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l------------~~~~~~~~~~~~~~~~L~I~~ 568 (808)
.+.+..++..+ .+.+|++++|.|.+ .+.|.+.|.|+|++ ..+ ....++.....++..+|.|.+
T Consensus 23 ~~~v~~~p~~~-~v~~G~~v~L~C~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 99 (233)
T 3bqu_C 23 ETTVTQSPASL-SMSIGEKVTIRCIT--STDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIEN 99 (233)
T ss_dssp CCCEEEECSBC--------CCEEEEE--EEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC---
T ss_pred ceeEEEcCCeE-EEecCCCEEEEEec--CCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECC
Confidence 34455545554 68999999999999 67777889999853 221 112344444444556899999
Q ss_pred CCCCCCEEEEEEEEeCCeeEE-EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 569 VRAEDEGIYICKATNALGEAV-TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~~G~~~-~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
++.+|+|.|.|.|.|..+... ....|.|...+ .+|.+...... ..
T Consensus 100 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~---------------------------------~~p~v~~~~~~-~~ 145 (233)
T 3bqu_C 100 MLSEDVADYYCLQSDNLPYTFGGGTNLEIKRAD---------------------------------AAPTVSIFPPS-SE 145 (233)
T ss_dssp --CCCCSEEEEEECSSSSCCBCCCCBC---CCC---------------------------------BCCEEEEECCC-HH
T ss_pred CCHHHCEEEEEEEecCCceeecCCEEEEEeCCC---------------------------------CCCEEEEeCCC-HH
Confidence 999999999999999866322 12344444311 13666554433 23
Q ss_pred ccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEE--EEE--eC---CEEEEEEccCCCCCcEEEEEEEEeCCc
Q psy2145 648 IMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFH--VQH--DF---GYVTLDITKCVPADSGVYMCKAINRAG 718 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~--~~~--~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G 718 (808)
+.+|+.++|.|.+ .|. |.+ .|.|+|||+.+..+.... ... ++ ..+.|.|..+..+|+|.|+|.|.|...
T Consensus 146 ~~~g~~v~L~C~~--~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 146 QLTSGGASVVCFL--NNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp HHHTTEEEEEEEE--EEEBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred hhcCCceEEEEEE--ccccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 4579999999999 564 443 899999999886541111 111 11 124799999999999999999999865
Q ss_pred c
Q psy2145 719 E 719 (808)
Q Consensus 719 ~ 719 (808)
.
T Consensus 224 ~ 224 (233)
T 3bqu_C 224 T 224 (233)
T ss_dssp -
T ss_pred C
Confidence 4
No 324
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.75 E-value=1.6e-18 Score=169.95 Aligned_cols=179 Identities=15% Similarity=0.242 Sum_probs=115.7
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCC----CcEEEEEECCEecCCCCC-eEEEeeCc----EEEEEECCCCCCCC
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDP----TLKVEWFRNEKPLEDSSR-ITTKHDFG----YVAMDLSHVRAEDE 574 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P----~~~v~W~k~g~~l~~~~~-~~~~~~~~----~~~L~I~~v~~~D~ 574 (808)
.+|+.++.....+.+|+++.|.|.+ .|.| .+.|.|+|++..+..... +.....++ ...|.|.+++.+|+
T Consensus 3 ~v~~~~P~~~~~v~~G~~v~L~C~~--~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~ 80 (207)
T 2vol_A 3 SVFIFPPKPKDVLTITLTPKVTCVV--VDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNG 80 (207)
T ss_dssp EEEEECCCHHHHHSTTSCCEEEEEE--EEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTT
T ss_pred cEEEeCcChhhhhccCCceEEEEEE--eCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCC
Confidence 4455555543237899999999999 4553 358999999987653210 00001111 23799999999999
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceE
Q psy2145 575 GIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSA 654 (808)
Q Consensus 575 G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 654 (808)
|.|+|.|.|..|.......+.+.. ....+|.+....... ...+|+.+
T Consensus 81 G~Y~C~a~~~~~~~~~~~~v~~~~--------------------------------~~~~~P~v~~~~~~~-~~~~g~~~ 127 (207)
T 2vol_A 81 KEFKCRVNSAAFPAPIEKTISKTK--------------------------------GRPKAPQVYTLPPPK-EQMAKDKV 127 (207)
T ss_dssp CCEEEEEECTTCSSCEEEEECCCC--------------------------------CCCBCCEEEEECCCT-GGGSSSEE
T ss_pred CEEEEEEEccCCCCceEEEeccCC--------------------------------CCCcCCeEEEeCCCH-HHhcCCce
Confidence 999999999988642222222100 011246665544432 23469999
Q ss_pred EEEEEEeeCC-CCC-eEEEEEECCEEccCCCcE--EEEEeCCE---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 655 HYDCRVVPVG-DPT-MRFEWFVNGVELKMGSRF--HVQHDFGY---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 655 ~l~C~v~~~g-~P~-p~i~W~~~g~~l~~~~~~--~~~~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+|.|.+ .| .|. +.|.|+|||.++...... ....++.+ +.|.|.....+|.|.|+|.|.|....
T Consensus 128 ~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l~ 197 (207)
T 2vol_A 128 SLTCMI--TDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLH 197 (207)
T ss_dssp EEEEEE--EEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTSG
T ss_pred EEEEEE--eeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCCC
Confidence 999999 56 455 499999999988643221 11112222 34677766667899999999999653
No 325
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.75 E-value=3.9e-18 Score=146.77 Aligned_cols=97 Identities=27% Similarity=0.483 Sum_probs=89.8
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
...||.|+..+.++ .+.+|+.+.|.|.+ .|.|.|.|+|+|||+.|..+.++.+..+++..+|.|.+++.+|+|.|+|
T Consensus 10 ~~~pP~f~~~p~~~-~v~~G~~~~l~C~~--~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (107)
T 3knb_B 10 QGSPPCFLRFPRPV-RVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCEEEeCCCcE-EEeCCCcEEEEEEE--EEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEE
Confidence 34589999999887 68999999999999 7999999999999999999999998888888899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEec
Q psy2145 580 KATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~ 599 (808)
.|.|..|..++++.|.|..+
T Consensus 87 ~a~N~~G~~~~~~~l~V~~p 106 (107)
T 3knb_B 87 RARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC-
T ss_pred EEEECCCEEEEEEEEEEEcC
Confidence 99999999999999999864
No 326
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.75 E-value=2.3e-19 Score=179.84 Aligned_cols=174 Identities=17% Similarity=0.257 Sum_probs=102.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EEe---e---------ccCcEEEEeeCCeEEEEEcccCcC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RPV---T---------IGHRFRPIHDFGYVALDIIDTIPE 118 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~l---~---------~~~r~~~~~~~~~~~L~I~~~~~~ 118 (808)
...|..+ .+.+|++++|.|.+.+ .|.+.|.|||++ ..+ . ...|+....+++..+|.|.+++.+
T Consensus 27 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 27 TQSPASL-SMSIGEKVTIRCITST--DIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp EEECSBC--------CCEEEEEEE--EESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred EEcCCeE-EEecCCCEEEEEecCC--cCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 3447777 8999999999999985 456689999853 211 1 134555544556668999999999
Q ss_pred CCeeEEEEEEecCcceE-EEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecC
Q psy2145 119 DSGTYTCRAVNLVGFAE-VQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKE 197 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~~-~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~ 197 (808)
|+|.|+|.|.|..+... ....|.|... ..+|.+...+....+.+
T Consensus 104 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~-----------------------------------~~~p~v~~~~~~~~~~~ 148 (233)
T 3bqu_C 104 DVADYYCLQSDNLPYTFGGGTNLEIKRA-----------------------------------DAAPTVSIFPPSSEQLT 148 (233)
T ss_dssp CCSEEEEEECSSSSCCBCCCCBC---CC-----------------------------------CBCCEEEEECCCHHHHH
T ss_pred HCEEEEEEEecCCceeecCCEEEEEeCC-----------------------------------CCCCEEEEeCCCHHhhc
Confidence 99999999998765321 1234444321 24677777655545558
Q ss_pred CCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE--EE-ecCc----eEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 198 GQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT--ET-NNFG----FVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 198 G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~--~~-~~~~----~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
|++++|.|.+.+ ..|. ..|.|+|||..+..+.... .. ..++ ...|.|..+..+|+|.|+|.|.|...
T Consensus 149 g~~v~L~C~~~g-~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 149 SGGASVVCFLNN-FYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp TTEEEEEEEEEE-EBSSCEEEEEEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CCceEEEEEEcc-ccCCceEEEEEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 999999999964 2344 4899999999886551111 11 1112 23689999999999999999999643
No 327
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.75 E-value=1.2e-16 Score=153.69 Aligned_cols=163 Identities=17% Similarity=0.242 Sum_probs=117.3
Q ss_pred cccCCCceEEEEEEeeCCCCCc--EEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCCeeEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTL--KVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNALGEAVTTA 592 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~--~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s~ 592 (808)
.+..|+++.|+|.+ +.|.| .|+|++.+..+ .+... +.+...|.|.+++.+|+|.|.|.|.|..|....++
T Consensus 18 ~v~~G~sv~L~C~a---~~p~P~~~i~W~~~~~~l---~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~ 89 (210)
T 1gsm_A 18 AVALGASRQLTCRL---ACADRGASVQWRGLDTSL---GAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTV 89 (210)
T ss_dssp EEETTCCEEEEEEE---CCSSTTCEEEEESSTTTT---CCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCEEEEEEC---CCCCCCcceEEeeccccc---CcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEE
Confidence 68999999999987 66666 99999976555 23322 24455899999999999999999999999988899
Q ss_pred EEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEEEEEeeCCC-C----C
Q psy2145 593 SMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGD-P----T 667 (808)
Q Consensus 593 ~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P----~ 667 (808)
.|.|...| .+..... ..+.+|+.+ |.|.+ .|. | .
T Consensus 90 ~ltV~~~P------------------------------------~~~~i~~--~~~~~g~~~-l~C~a--~g~~P~~~~~ 128 (210)
T 1gsm_A 90 QLLVYAFP------------------------------------NQLTVSP--AALVPGDPE-VACTA--HKVTPVDPNA 128 (210)
T ss_dssp EEEEEBCC------------------------------------SEEEEES--SSBCTTCCE-EEEEE--EEEBCCCTTT
T ss_pred EEEEEecC------------------------------------CCcEEcc--ceEEeCCce-EEEEe--CCCCCCCCCC
Confidence 99998753 3333222 256778888 99999 554 6 4
Q ss_pred eEEEEEECCEEccCCCcEE--EEE--------eCC----EEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 668 MRFEWFVNGVELKMGSRFH--VQH--------DFG----YVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 668 p~i~W~~~g~~l~~~~~~~--~~~--------~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
+.|.|||||++|....... +.. ... .++|.+.....+|.+.|+|.|.|.+-....+-..
T Consensus 129 lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L~~~~~~~~~ 201 (210)
T 1gsm_A 129 LSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHRQ 201 (210)
T ss_dssp EEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEETTEEEEEEE
T ss_pred cEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeCCCCcccccc
Confidence 6999999999996432111 100 111 2345555666677789999999997555444333
No 328
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.75 E-value=7.5e-18 Score=173.62 Aligned_cols=195 Identities=16% Similarity=0.180 Sum_probs=128.4
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee--------------ccCcEEEEe--eCCeEEEEEc
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT--------------IGHRFRPIH--DFGYVALDII 113 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~--------------~~~r~~~~~--~~~~~~L~I~ 113 (808)
.|..+ .+.+|++|+|.|.+.+...+.+.+.|||.. .. +. ...|+.+.. ..+.++|.|.
T Consensus 6 qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (280)
T 3fku_X 6 QSGAE-VKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLR 84 (280)
T ss_dssp CCCCC-EECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEEC
T ss_pred cCCCE-EECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEEC
Confidence 37777 899999999999998532366799999832 11 10 124777663 3456799999
Q ss_pred ccCcCCCeeEEEEEEec---------CcceEEEEEEEEec-CCCccccccccccceeeeeeccccccccccccccccCCC
Q psy2145 114 DTIPEDSGTYTCRAVNL---------VGFAEVQATLQCRG-SAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQA 183 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~---------~g~~~~~~~l~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (808)
+++.+|+|.|.|.+.|. .......+.|.|.. ...... ........+
T Consensus 85 ~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~------------------------~~~~~~~~~ 140 (280)
T 3fku_X 85 SLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGG------------------------GGSGGGGIQ 140 (280)
T ss_dssp SCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------------------------------CC
T ss_pred CCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCC------------------------CCCCceEee
Confidence 99999999999999986 11122345566643 100000 000001234
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecC-CC-CeEEEEeeC--CEEcc------------CCCceEEEecCceEEEEEcc
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVS-DN-TMKVEWFHN--NVPIK------------SGSRFTETNNFGFVALDIMQ 247 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~-~p-~~~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~ 247 (808)
|.+...+. ..+.+|++|+|.|.+. + .+ .+.+.|||. +..+. ...++....+....+|.|.+
T Consensus 141 ~~v~~~p~-~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 217 (280)
T 3fku_X 141 PGLTQPPS-VSKGLRQTATLTCTGN--SNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITG 217 (280)
T ss_dssp CSBBCCSE-EEECTTCCEEEEEECC--CCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECS
T ss_pred eEEEeCCc-EEEecCCCEEEEEEec--CCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECC
Confidence 55555555 8899999999999994 4 33 478999982 33221 13566666666677899999
Q ss_pred CCCCCcEEEEEEEEeCce--e-EEEEEEEEEee
Q psy2145 248 CLPEDSGVYTCRAVNALG--Q-AVTSGNLLVHS 277 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~g--~-~~~~~~l~V~~ 277 (808)
++.+|+|.|.|.+.|..+ . ....+.|.|..
T Consensus 218 v~~~DsG~Y~C~~~~~~~~~~~~g~~t~l~V~~ 250 (280)
T 3fku_X 218 LQPEDEADYYCSTWDSSLSAVVFGGGTKLTVLG 250 (280)
T ss_dssp CCGGGCSEEEEEEEETTTTEEEEBCCCEEEEC-
T ss_pred CCHHHCEEEEEEEecCCCCceEECCCEEEEECC
Confidence 999999999999999762 1 22335677754
No 329
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.75 E-value=4e-18 Score=144.82 Aligned_cols=93 Identities=25% Similarity=0.441 Sum_probs=82.5
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC--cEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS--RFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||++|..+. ++.+..+++.++|.|.++..+|+|.|+|.
T Consensus 5 PP~i~~~p~-~~~v~~G~~~~l~C~~--~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 5 PPKIEALPS-DISIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEECCCCS-EEEEETTSEEEEEEEE--EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCC-cEEEeCCCeEEEEEEE--EEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 466665544 3678999999999999 799999999999999997654 68888888889999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEe
Q psy2145 713 AINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~ 730 (808)
|+|.+|.++.++.|.|+.
T Consensus 82 a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCEEEEEEEEEEEE
Confidence 999999999999999974
No 330
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.75 E-value=6e-18 Score=161.43 Aligned_cols=156 Identities=16% Similarity=0.258 Sum_probs=111.6
Q ss_pred CCccccCCCCcEEEEEEEeeCCCCCceEEEEeC-CEEee------------cc--CcEEEEeeCCeEEEEEcccCcCCCe
Q psy2145 57 KSIENLRERGHAHFECKLEPVTDSNLKVEWFKN-GRPVT------------IG--HRFRPIHDFGYVALDIIDTIPEDSG 121 (808)
Q Consensus 57 ~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~-g~~l~------------~~--~r~~~~~~~~~~~L~I~~~~~~D~G 121 (808)
..+ .+.+|++|+|.|.+.. ..+.+.|.|+|+ +..|. .. .|+.+ +.+..+|.|.+++.+|+|
T Consensus 7 ~~v-~v~~G~~vtL~c~~~~-~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G 82 (180)
T 2dru_A 7 PNV-NAITGSNVTLTILKHP-LASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRG 82 (180)
T ss_dssp CEE-EEETTSCEEECCCSSC-CCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCE
T ss_pred ceE-EEEeCCCEEEeCCCCC-CCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCe
Confidence 344 7899999999999853 345789999994 43332 11 35554 223347999999999999
Q ss_pred eEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeE
Q psy2145 122 TYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRA 201 (808)
Q Consensus 122 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v 201 (808)
.|+|.+.+.. .....+.|.|... ...|.+.. .++.+
T Consensus 83 ~Y~C~v~~~~-~~~~~~~L~V~~~-----------------------------------~~~P~i~~--------~~~~v 118 (180)
T 2dru_A 83 DYYMRMLHET-EDQWKITMEVYEM-----------------------------------VSKPMIYW--------ECSNA 118 (180)
T ss_dssp EEEEEEESSS-EEEEEEEEEEECC-----------------------------------CCCCEEEE--------EGGGT
T ss_pred EEEEEEEcCC-eEEEEEEEEEECC-----------------------------------CCCCEEEe--------cCCCE
Confidence 9999998765 5566777877642 22344433 34569
Q ss_pred EEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEE
Q psy2145 202 HFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNL 273 (808)
Q Consensus 202 ~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 273 (808)
+|.|.+. ..|.+.|.|+++|..+.. ..+. +|.+.. .+|+|.|+|.|.|..|...+...+
T Consensus 119 ~L~C~~~--~gp~p~i~W~~~~~~l~~-------~~~~--~l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~i 177 (180)
T 2dru_A 119 TLTCEVL--EGTDVELKLYQGKEHLRS-------LRQK--TMSYQW--TNLRAPFKCKAVNRVSQESEMEVV 177 (180)
T ss_dssp EEEEECS--SCTTCEEEEEETTEEEEE-------ESSS--EEEEEC--SCCSSCEEEEEEETTEEEEEEECC
T ss_pred EEEEEeC--CCCCCEEEEEECCeECcC-------CCCC--EEEEEE--hhcCccEEEEEecCcCccccceeE
Confidence 9999983 338899999999998861 1112 566633 789999999999999987766544
No 331
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.75 E-value=1.4e-17 Score=168.86 Aligned_cols=187 Identities=12% Similarity=0.130 Sum_probs=123.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC-----EEe--------------eccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG-----RPV--------------TIGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g-----~~l--------------~~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+...+.|||.. ..+ ....|+.+..+ .+.++|.
T Consensus 4 v~~p~~v-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (253)
T 3liz_H 4 LVESGGG-LVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQ 82 (253)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEE
T ss_pred EEcCCCE-EECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEE
Confidence 4456677 899999999999998522346789999832 111 01257776654 3677899
Q ss_pred EcccCcCCCeeEEEEEEecC----cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE
Q psy2145 112 IIDTIPEDSGTYTCRAVNLV----GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT 187 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~----g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~ 187 (808)
|.+++.+|+|.|.|.+.|.. +.....+.|.|.... ..+|.+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~P~i~ 128 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK----------------------------------TTPPSVY 128 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC----------------------------------CBCCEEE
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC----------------------------------CCCCeEE
Confidence 99999999999999998752 222334566664211 3467776
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
.......+.+|+.++|.|.+.+ ..|.+ .+.|+++|..+...........+. ...|.|.....+| |.|+|.|.|.
T Consensus 129 ~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~ 206 (253)
T 3liz_H 129 PLAPGSAAQTNSMVTLGCLVKG-YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHP 206 (253)
T ss_dssp EECC------CCEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEG
T ss_pred EecCCcccCCCCcEEEEEEEee-EeCCCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEEC
Confidence 5555556778999999999964 25655 899999987432110000111111 1369999999999 9999999998
Q ss_pred ceeEEEEEEEEEe
Q psy2145 264 LGQAVTSGNLLVH 276 (808)
Q Consensus 264 ~g~~~~~~~l~V~ 276 (808)
.+.......|.+.
T Consensus 207 ~~~~~~~~~~~~~ 219 (253)
T 3liz_H 207 ASSTKVDKKIVPR 219 (253)
T ss_dssp GGTEEEEEECCCC
T ss_pred CCCcceEEEecCc
Confidence 8877666666543
No 332
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.74 E-value=3.1e-18 Score=169.45 Aligned_cols=180 Identities=16% Similarity=0.205 Sum_probs=115.2
Q ss_pred CCeeeecCCCccc-ccCCCceEEEEEEeeCCC---C-CcEEEEEECCEecCCCCCeEE-EeeC----cEEEEEECCCCCC
Q psy2145 503 RPVFTKPLQNIDA-VEEGKNAHFSCRLIPVGD---P-TLKVEWFRNEKPLEDSSRITT-KHDF----GYVAMDLSHVRAE 572 (808)
Q Consensus 503 ~P~f~~~~~~~~~-v~~G~~v~l~C~v~~~g~---P-~~~v~W~k~g~~l~~~~~~~~-~~~~----~~~~L~I~~v~~~ 572 (808)
+|.+....+.... +.+|+.++|.|.+ .|. | .+.|+|+|+|..+........ ...+ ....|.|.+++.+
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~--~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~ 86 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVV--VDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWM 86 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEE--EEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHH
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEE--cCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcC
Confidence 4555444444323 7899999999999 454 4 489999999988754321110 1111 1237999999999
Q ss_pred CCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCc
Q psy2145 573 DEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQ 652 (808)
Q Consensus 573 D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~ 652 (808)
|+|.|+|.|.|..+.......+... . ....+|.+........ ..+|+
T Consensus 87 D~g~Y~C~~~~~~~~~~~~~~v~~~--~------------------------------~~~~~P~v~~~~~~~~-~~~g~ 133 (218)
T 2rgs_A 87 SGKEFKCKVNNKDLPSPIERTISKI--K------------------------------GLVRAPQVYILPPPAE-QLSRK 133 (218)
T ss_dssp TTCCEEEEEEETTCSSCEEEEECCC--C------------------------------CCCBCCEEEEECCCGG-GTTSS
T ss_pred CCCeEEEEEECCcCCCcceEEEeec--C------------------------------CCCCCCEEEEECCChH-HhcCC
Confidence 9999999999997754222222110 0 0112466655444322 34699
Q ss_pred eEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEE-EeCC-E---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 653 SAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHVQ-HDFG-Y---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 653 ~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~-~~~~-~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
.++|.|.+ .| .|.+ .|.|+|||..+......... ..++ + +.|.|.....+|.|.|+|.|.|....
T Consensus 134 ~~~L~C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 134 DVSLTCLV--VGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEEEEEE--EEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTSG
T ss_pred ceEEEEEE--EeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCC
Confidence 99999999 67 6765 99999999988543221111 1122 2 24566655556799999999998754
No 333
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=164.88 Aligned_cols=185 Identities=15% Similarity=0.205 Sum_probs=134.8
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeecc--CcEEEEeeCCeEEEEEcccCcCCCeeEEEEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIG--HRFRPIHDFGYVALDIIDTIPEDSGTYTCRA 127 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~--~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 127 (808)
++.+..|.++ .+.+|+.++|.|.+. +.|.+.|.|+|+|..|..+ .++.+..+....+|.|.++..+|+|.|+|.|
T Consensus 19 ~P~~~~p~~~-~~~~G~~v~l~C~~~--g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 95 (215)
T 3mtr_A 19 APKLQGPVAV-YTWEGNQVNITCEVF--AYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTA 95 (215)
T ss_dssp EEEEECCSEE-EECTTCCEEEEEEEE--EESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEE
T ss_pred CCcccCCceE-EEECCCCEEEEEEEe--ecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEE
Confidence 3444677777 899999999999999 4788899999999999876 5777777777789999999999999999999
Q ss_pred EecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEE
Q psy2145 128 VNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRL 207 (808)
Q Consensus 128 ~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~ 207 (808)
.|..|.....+.|.|...+ .+|..... ...+..+.|.|..
T Consensus 96 ~n~~g~~~~~~~l~v~~~P-----------------------------------~~p~~~~~-----~~~~~~~~l~w~~ 135 (215)
T 3mtr_A 96 VNRIGQESLEFILVQADTP-----------------------------------SSPSIDQV-----EPYSSTAQVQFDE 135 (215)
T ss_dssp ECSSCEEEEEEEEEECCCC-----------------------------------CCCEEEEE-----EEETTEEEEEEEC
T ss_pred EECCCceEEEEEEEECCCC-----------------------------------CCCcceEE-----EEecceEEEEEec
Confidence 9999999888888886432 23322211 2346778999974
Q ss_pred ee--cCCCCe--EEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEEee
Q psy2145 208 IP--VSDNTM--KVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 208 ~~--~~~p~~--~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 277 (808)
.. .+.|.. .+.|++++........+.........+|.|.++.+.|.|.|+|.|.|..|....+..+.|..
T Consensus 136 p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T 209 (215)
T 3mtr_A 136 PEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKT 209 (215)
T ss_dssp CSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEEC
T ss_pred CCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEe
Confidence 21 122332 58898877542211111111111112799999999999999999999999877776666654
No 334
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.74 E-value=4.5e-16 Score=149.63 Aligned_cols=167 Identities=11% Similarity=0.247 Sum_probs=121.6
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCC---CeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDN---TMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p---~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
+.+...|....+..|+.++|+|.+.+ +.| +..++|+|||.++..... .|.|..+...|+|.|+|++
T Consensus 3 ~tVs~~P~~~~i~~GdsVTLTatVaG-GkP~pspyTYqWyKDG~~IsGaT~----------tLti~s~t~sdSG~YqCvV 71 (304)
T 3shs_A 3 FTVSIQSNKRCFLAGDGFTLTATVAG-DEPLPSNLTYTWTKDDQPHENNTA----------TLTVADATSENAGSYKVTV 71 (304)
T ss_dssp EEEEEEESCSSBCTTCCEEEEEEEEE-SSSCCCCEEEEEEETTEECSCCSS----------EEEESSCCGGGCEEEEEEE
T ss_pred cEEEeCCCCccccCCCCEEEEEEecC-CCCCCCCceEEEEECCccccCCcc----------eEEeeeccccCCeEEEEEE
Confidence 34566777888999999999999974 767 679999999998765322 7889999999999999999
Q ss_pred EeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee-ccCCCceEeecCCeEEEEEEE
Q psy2145 261 VNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF-TQPMRDIHVAENQAAHFEARL 339 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~-~~~~~~~~v~~G~~~~l~C~~ 339 (808)
.|..|....+..+.|..... +.+ ...+....+..|..+.|.+.+
T Consensus 72 TDa~Gcs~tSs~VtVT~~a~-----------------------------------l~i~it~P~s~~vssg~sVtL~aTV 116 (304)
T 3shs_A 72 QDTDTMTSVESEVFLMEEAE-----------------------------------LIVNITEPQHFYVSSQTDVELHATV 116 (304)
T ss_dssp EETTTCCEEECCCEEECBCC-----------------------------------EEEEESSCSEEEECSSCCEEEEEEE
T ss_pred EECCCCeeeeeeEEEeccCc-----------------------------------eeEEecCCCceeccCCCeEEEEEEE
Confidence 99888666555555554221 111 122334445667889999887
Q ss_pred ee-cCCC-----ccEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcceEEE--EEEEE
Q psy2145 340 IP-VGDS-----KLKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGEAVTS--STLFV 407 (808)
Q Consensus 340 ~~-~g~p-----~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~--~~l~V 407 (808)
.. .|.| .++++|++||..+.... .|.+......++|.|+|++.|..+.-..+ +.|.+
T Consensus 117 t~SGGtppA~~~~yTYQWyKngt~IsgAq-----------~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~ 181 (304)
T 3shs_A 117 KFSGGKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQEFTADKNGVYTVKVWGESEDSAASASTKIML 181 (304)
T ss_dssp EETTSCCSSTTCCCEEEEEETTEEEESSS-----------EEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEE
T ss_pred eccCCCCcccCCCceeEEeeCCeEccCcc-----------ccceeeEEecCCeEEEEEEEcCCCCcccccceEEEE
Confidence 22 3444 57999999998775332 47778888899999999999998744333 44444
No 335
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.74 E-value=2.5e-17 Score=166.34 Aligned_cols=180 Identities=17% Similarity=0.264 Sum_probs=122.4
Q ss_pred eeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEE--------------CCEecCCC----CCeEEEee-CcEEEEE
Q psy2145 505 VFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFR--------------NEKPLEDS----SRITTKHD-FGYVAMD 565 (808)
Q Consensus 505 ~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k--------------~g~~l~~~----~~~~~~~~-~~~~~L~ 565 (808)
.++.++..+ .+.+|++|+|.| . .+.|.+.|.|+| ++..+... .|+.+..+ .+.++|.
T Consensus 4 ~v~~~p~~v-~v~~G~~v~L~C-~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~ 79 (245)
T 4ei6_B 4 KVLQIPSHQ-IIDMGQMVTLNC-D--PVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLK 79 (245)
T ss_dssp CCEEECSEE-EEETTCCEEEEE-E--CCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEE
T ss_pred ceEeCCceE-EecCCCCEEEEE-E--cCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEE
Confidence 344444444 688999999999 5 688999999998 33322221 67766653 4466899
Q ss_pred ECCCCCCCCEEEEEEEEeC----CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEee
Q psy2145 566 LSHVRAEDEGIYICKATNA----LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQL 641 (808)
Q Consensus 566 I~~v~~~D~G~Y~C~a~N~----~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~ 641 (808)
|.+++.+|+|.|.|.|.+. .+.......|.|..... ...+|.+...
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~p~~~~~ 129 (245)
T 4ei6_B 80 IQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK------------------------------NVFPPEVAVF 129 (245)
T ss_dssp ECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGG------------------------------GCBCCEEEEE
T ss_pred ECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccC------------------------------CCCCceEEEe
Confidence 9999999999999999963 23333445677764211 0123655544
Q ss_pred cCCCccccCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEEE--------eCC---EEEEEEccCCCCC-cE
Q psy2145 642 LTGTSEIMEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHVQH--------DFG---YVTLDITKCVPAD-SG 707 (808)
Q Consensus 642 ~~~~~~v~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~~--------~~~---~~~L~I~~v~~~D-~G 707 (808)
......+.+|+.++|.|.+ .| .|.+ .|.|++||..|..+.+..... ++. .+.|.|.....+| .|
T Consensus 130 ~~~~~~~~~g~~v~l~C~~--~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g 207 (245)
T 4ei6_B 130 EPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRN 207 (245)
T ss_dssp CCCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTC
T ss_pred CCCcccccCCCceEEEEEE--eeEeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCC
Confidence 4443457789999999999 56 4544 899999999987543221100 111 1358899888888 99
Q ss_pred EEEEEEEeCCcce
Q psy2145 708 VYMCKAINRAGEA 720 (808)
Q Consensus 708 ~Y~C~A~N~~G~~ 720 (808)
.|+|.|.|.....
T Consensus 208 ~ytC~v~~~~l~~ 220 (245)
T 4ei6_B 208 HFRCQVQFYGLSE 220 (245)
T ss_dssp EEEEEEEECCBCT
T ss_pred eEEEEEEECCCCC
Confidence 9999999986543
No 336
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.74 E-value=3.4e-17 Score=165.34 Aligned_cols=173 Identities=17% Similarity=0.287 Sum_probs=118.9
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEe--------------cCCCCCeEEEe-eCcEEEEEECCCCCCCCEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKP--------------LEDSSRITTKH-DFGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~--------------l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y 577 (808)
.+.+|+.|+|.|.+ .+.|.+.|.|+|. +.. .....|+.+.. ..+.++|.|.+++.+|+|.|
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (245)
T 3nfj_J 12 VQPVGSPLSLECTV--EGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFY 89 (245)
T ss_dssp EEETTCCEEEEEEE--ESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EecCCCCEEEEEEe--cCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEE
Confidence 58899999999999 6889999999992 211 11124555554 34667899999999999999
Q ss_pred EEEEEeCCe------eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 578 ICKATNALG------EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 578 ~C~a~N~~G------~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
.|.|.|..| .......|.|..... ...+|.+.........+.+|
T Consensus 90 ~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P~v~~~~~~~~~~~~g 139 (245)
T 3nfj_J 90 LCAWSVSVGAGVPTIYFGEGSWLTVVEDLN------------------------------KVFPPEVAVFEPSEAEISHT 139 (245)
T ss_dssp EEEEECCTTTSSCCCEECCCEEEEEESCGG------------------------------GCBCCEEEEEECCHHHHHHH
T ss_pred EEEEeeccCCCceeEEECCCeEEEEEcccC------------------------------CCCCCceEeecCCcccccCC
Confidence 999999332 222335666664211 11246665544444456779
Q ss_pred ceEEEEEEEeeCC-CCC-eEEEEEECCEEccCCCcEEEE--------EeCC---EEEEEEccCCCCC-cEEEEEEEEeCC
Q psy2145 652 QSAHYDCRVVPVG-DPT-MRFEWFVNGVELKMGSRFHVQ--------HDFG---YVTLDITKCVPAD-SGVYMCKAINRA 717 (808)
Q Consensus 652 ~~v~l~C~v~~~g-~P~-p~i~W~~~g~~l~~~~~~~~~--------~~~~---~~~L~I~~v~~~D-~G~Y~C~A~N~~ 717 (808)
+.++|.|.+ .| .|+ +.|.|++||..|..+...... .++. .+.|.|.....+| .|.|+|.|.|..
T Consensus 140 ~~~~l~C~~--~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~ 217 (245)
T 3nfj_J 140 QKATLVCLA--TGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (245)
T ss_dssp SEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred CceEEEEEE--ccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECC
Confidence 999999999 56 344 489999999998753221100 1111 1478888888888 679999999987
Q ss_pred cceE
Q psy2145 718 GEAV 721 (808)
Q Consensus 718 G~~~ 721 (808)
+...
T Consensus 218 ~~~~ 221 (245)
T 3nfj_J 218 LSEN 221 (245)
T ss_dssp BCSS
T ss_pred CCCc
Confidence 6543
No 337
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.74 E-value=2.3e-17 Score=166.04 Aligned_cols=177 Identities=17% Similarity=0.270 Sum_probs=120.7
Q ss_pred eecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEE--------------CCEecC---CCCCeEEEee-CcEEEEEECC
Q psy2145 507 TKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFR--------------NEKPLE---DSSRITTKHD-FGYVAMDLSH 568 (808)
Q Consensus 507 ~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k--------------~g~~l~---~~~~~~~~~~-~~~~~L~I~~ 568 (808)
..++..+ .+.+|+.|.|.|.+ .+ |.+.|.|+| ++.... ...|+.+..+ .+.++|.|.+
T Consensus 6 ~~~p~~v-~v~~G~~v~L~C~~--~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 6 VQSPRHI-IKEKGGRSVLTCIP--IS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp EEECSEE-EEETTCCEEEEEEC--CT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred ccCccee-eecCCCcEEEEEEe--CC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 3333333 58899999999998 44 788999998 222111 1256666543 3466899999
Q ss_pred CCCCCCEEEEEEEEeC---CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCC
Q psy2145 569 VRAEDEGIYICKATNA---LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGT 645 (808)
Q Consensus 569 v~~~D~G~Y~C~a~N~---~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~ 645 (808)
++.+|+|.|.|.|.+. .+.......|.|..... ...+|.+.......
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~p~~~~~~~~~ 131 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLR------------------------------NVTPPKVSLFEPSK 131 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGG------------------------------GCBCCEEEEECCCH
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEecccc------------------------------CCCCCeeEEeCCch
Confidence 9999999999999843 22233335666664211 01246655544444
Q ss_pred ccccCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEE---EEEeCCE----EEEEEccCCCCC-cEEEEEEEEe
Q psy2145 646 SEIMEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFH---VQHDFGY----VTLDITKCVPAD-SGVYMCKAIN 715 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~---~~~~~~~----~~L~I~~v~~~D-~G~Y~C~A~N 715 (808)
..+.+|+.++|.|.+ .| .|.+ .|.|+|||++|..+.+.. ....++. +.|.|..+..+| .|.|+|.|.|
T Consensus 132 ~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~ 209 (240)
T 3q5y_A 132 AEIANKQKATLVCLA--RGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQF 209 (240)
T ss_dssp HHHHHHSEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEE
T ss_pred hhcccCCceEEEEEE--eeEECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEc
Confidence 457789999999999 56 6655 899999999997643321 2223333 349999999888 7799999999
Q ss_pred CCcc
Q psy2145 716 RAGE 719 (808)
Q Consensus 716 ~~G~ 719 (808)
....
T Consensus 210 ~~~~ 213 (240)
T 3q5y_A 210 HGLS 213 (240)
T ss_dssp CCBC
T ss_pred CCCC
Confidence 8654
No 338
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.74 E-value=4e-18 Score=168.62 Aligned_cols=177 Identities=15% Similarity=0.168 Sum_probs=115.4
Q ss_pred cCCCCccc-cCCCCcEEEEEEEeeCC--CCCceEEEEeCCEEeeccCcEEE-EeeC----CeEEEEEcccCcCCCeeEEE
Q psy2145 54 TKPKSIEN-LRERGHAHFECKLEPVT--DSNLKVEWFKNGRPVTIGHRFRP-IHDF----GYVALDIIDTIPEDSGTYTC 125 (808)
Q Consensus 54 ~~p~~~~~-v~~G~~v~l~C~~~~~~--~p~~~v~W~~~g~~l~~~~r~~~-~~~~----~~~~L~I~~~~~~D~G~Y~C 125 (808)
..|.+... +.+|++++|.|.+.+.. .+.+.|.|||+|..+........ ...+ ...+|.|.+++.+|+|.|+|
T Consensus 14 ~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C 93 (218)
T 2rgs_A 14 IFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKC 93 (218)
T ss_dssp EECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEE
T ss_pred EECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEE
Confidence 34555523 89999999999999632 23479999999988764321111 1111 22479999999999999999
Q ss_pred EEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEE
Q psy2145 126 RAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFEC 205 (808)
Q Consensus 126 ~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C 205 (808)
.|.|..+.......+... .....+|.+...+......+|+.++|.|
T Consensus 94 ~~~~~~~~~~~~~~v~~~----------------------------------~~~~~~P~v~~~~~~~~~~~g~~~~L~C 139 (218)
T 2rgs_A 94 KVNNKDLPSPIERTISKI----------------------------------KGLVRAPQVYILPPPAEQLSRKDVSLTC 139 (218)
T ss_dssp EEEETTCSSCEEEEECCC----------------------------------CCCCBCCEEEEECCCGGGTTSSEEEEEE
T ss_pred EEECCcCCCcceEEEeec----------------------------------CCCCCCCEEEEECCChHHhcCCceEEEE
Confidence 999987654222222110 0114577776665554444699999999
Q ss_pred EEeecCCCCe-EEEEeeCCEEccCCCceEE-EecCceE----EEEEccCCCCCcEEEEEEEEeCce
Q psy2145 206 RLIPVSDNTM-KVEWFHNNVPIKSGSRFTE-TNNFGFV----ALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 206 ~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~-~~~~~~~----~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
.+.+ ..|.+ .|.|+|||..+........ ...+|.+ .|.|.....+|.|.|+|.|.|...
T Consensus 140 ~~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 140 LVVG-FNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp EEEE-EBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred EEEe-eeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 9953 25554 9999999998854221111 1223321 355665555679999999999654
No 339
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.74 E-value=2e-17 Score=163.21 Aligned_cols=180 Identities=13% Similarity=0.186 Sum_probs=118.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEe---e-------------ccCcEEEEee--CCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPV---T-------------IGHRFRPIHD--FGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l---~-------------~~~r~~~~~~--~~~~~L~I 112 (808)
+..|..+ .+.+|++++|.|.+.+...+.+.|.|||+ |..+ . ...|+.+..+ .+.++|.|
T Consensus 4 v~qp~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 82 (215)
T 1c5d_H 4 LLESGPG-LVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKM 82 (215)
T ss_dssp EEEECCC-EECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEE
T ss_pred EEcCCCe-eecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEE
Confidence 3457777 89999999999999852223578999985 2221 1 1357776654 35679999
Q ss_pred cccCcCCCeeEEEEEEecCcc---eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 113 IDTIPEDSGTYTCRAVNLVGF---AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g~---~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
.+++.+|+|.|.|.+.|..+. ....+.|.|.... ..+|.+...
T Consensus 83 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~i~~~ 128 (215)
T 1c5d_H 83 NSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ----------------------------------TTAPSVYPL 128 (215)
T ss_dssp SSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSC----------------------------------CBCCCEEEE
T ss_pred CCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCC----------------------------------CCCCeEEec
Confidence 999999999999999986422 2234577775311 235655554
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCceEEE--EEccCCCCCcEEEEEEEEeCcee
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFGFVAL--DIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~~~L--~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
+....+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+........... +..++ .+.....+| |.|+|.|.|..|.
T Consensus 129 ~~~~~~~~g~~v~L~C~~~g-~~P~p~~v~W~~~g~~~~~~~~~~~~~~-g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~ 205 (215)
T 1c5d_H 129 APGCGDTTSSTVTLGCLVKG-YFPEPVTVTWNSGALSSDVHTFPAVLQS-GLYTLTSSVTSSTWPS-QTVTCNVAHPASS 205 (215)
T ss_dssp CCCSSCCCCSSEEEEEEEEE-EBSSCCEEEEGGGTTCCSCCBCCCEEET-TEEEEEEEEEESSTTT-SCCEEEEEEGGGT
T ss_pred cCChhhccCCcEEEEEEEee-eEcCCcEEEEccCCccCceEecCcccCC-CCEEEEEEEecccCCC-CeEEEEEEeCCCC
Confidence 43444678999999999963 33666 9999999876532111111122 33222 123444456 9999999998876
Q ss_pred EEEE
Q psy2145 267 AVTS 270 (808)
Q Consensus 267 ~~~~ 270 (808)
....
T Consensus 206 ~~~~ 209 (215)
T 1c5d_H 206 TKVD 209 (215)
T ss_dssp EEEE
T ss_pred ccEE
Confidence 5543
No 340
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=171.96 Aligned_cols=190 Identities=21% Similarity=0.282 Sum_probs=123.5
Q ss_pred cccCCCceEEEEEEeeCCC--CCcEEEEEECC--EecC-----------------CCCCeEEEe--eCcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGD--PTLKVEWFRNE--KPLE-----------------DSSRITTKH--DFGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~--P~~~v~W~k~g--~~l~-----------------~~~~~~~~~--~~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+. +.+.+.|+|.. ..+. ...|+.+.. ..+.++|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (280)
T 3fku_X 11 VKKPGSSVKVSCTS--SEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRS 88 (280)
T ss_dssp EECTTCCEEEEEEE--CCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCS
T ss_pred EECCCCcEEEEEEe--eccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 68899999999999 454 66889999732 1110 124666663 34567899999999
Q ss_pred CCCEEEEEEEEeC---------CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec
Q psy2145 572 EDEGIYICKATNA---------LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL 642 (808)
Q Consensus 572 ~D~G~Y~C~a~N~---------~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~ 642 (808)
+|+|.|.|.+.|. .+.......|.|...+....... ......+|.+.+.+
T Consensus 89 ~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~---------------------~~~~~~~~~v~~~p 147 (280)
T 3fku_X 89 EDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGG---------------------SGGGGIQPGLTQPP 147 (280)
T ss_dssp TTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC-----------------------------------CCCSBBCCS
T ss_pred hhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCC---------------------CCceEeeeEEEeCC
Confidence 9999999999997 12222345566654110000000 00000123333322
Q ss_pred CCCccccCCceEEEEEEEeeCC-CC-CeEEEEEE--CCEEcc------------CCCcEEEEEeCCEEEEEEccCCCCCc
Q psy2145 643 TGTSEIMEGQSAHYDCRVVPVG-DP-TMRFEWFV--NGVELK------------MGSRFHVQHDFGYVTLDITKCVPADS 706 (808)
Q Consensus 643 ~~~~~v~~G~~v~l~C~v~~~g-~P-~p~i~W~~--~g~~l~------------~~~~~~~~~~~~~~~L~I~~v~~~D~ 706 (808)
. ..+.+|++|+|.|.+ .+ .+ .+.+.||| .|..+. ...||.+..++...+|+|.+++.+|+
T Consensus 148 ~--~~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 223 (280)
T 3fku_X 148 S--VSKGLRQTATLTCTG--NSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDE 223 (280)
T ss_dssp E--EEECTTCCEEEEEEC--CCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred c--EEEecCCCEEEEEEe--cCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 2 468899999999999 56 44 48999998 333222 24678888788888999999999999
Q ss_pred EEEEEEEEeCCcc---eEEEEEEEEEeC
Q psy2145 707 GVYMCKAINRAGE---AVSSTSLKVKSK 731 (808)
Q Consensus 707 G~Y~C~A~N~~G~---~~~s~~l~V~~~ 731 (808)
|.|.|.|.|..+. ....+.|.|...
T Consensus 224 G~Y~C~~~~~~~~~~~~g~~t~l~V~~~ 251 (280)
T 3fku_X 224 ADYYCSTWDSSLSAVVFGGGTKLTVLGQ 251 (280)
T ss_dssp SEEEEEEEETTTTEEEEBCCCEEEEC--
T ss_pred EEEEEEEecCCCCceEECCCEEEEECCC
Confidence 9999999998732 222356777544
No 341
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.73 E-value=1.1e-17 Score=166.82 Aligned_cols=174 Identities=18% Similarity=0.280 Sum_probs=117.0
Q ss_pred cccCCCceEEEEEEeeCCCCC----cEEEEEEC--CEecC----------------CCCCeEEEee--CcEEEEEECCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPT----LKVEWFRN--EKPLE----------------DSSRITTKHD--FGYVAMDLSHVR 570 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~----~~v~W~k~--g~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~ 570 (808)
.+.+|++|+|.|.+ .+.|. +.|.|+|+ |..+. ...|+.+..+ .+..+|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 88 (228)
T 3bae_H 11 LLKPSQTLSLTCSF--SGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVD 88 (228)
T ss_dssp EECTTCCEEEEEEE--ESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCC
T ss_pred eecCCCeEEEEEEE--eCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCC
Confidence 68899999999999 67775 88999985 32211 1246666543 245789999999
Q ss_pred CCCCEEEEEEEEeCCe------e---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEee
Q psy2145 571 AEDEGIYICKATNALG------E---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQL 641 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G------~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~ 641 (808)
.+|+|.|.|.+.|..| . ....+.|.|...+. .+|.+...
T Consensus 89 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~i~~~ 136 (228)
T 3bae_H 89 TADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKT--------------------------------TAPSVYPL 136 (228)
T ss_dssp GGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCC--------------------------------BCCEEEEE
T ss_pred cccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCC--------------------------------CCCEEEEe
Confidence 9999999999999765 2 11235666653110 13555443
Q ss_pred cCCCccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEEEEEeC---CEEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 642 LTGTSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFHVQHDF---GYVTLDITKCVPADSGVYMCKAINR 716 (808)
Q Consensus 642 ~~~~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~ 716 (808)
.+. ..+.+|+.++|.|.+ .|. |.| .|.|+++|..+.......+...+ ..+.|.|..+..+| |.|+|.|.|.
T Consensus 137 ~~~-~~~~~g~~~~l~C~~--~g~~P~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~ 212 (228)
T 3bae_H 137 APV-CGDTTGSSVTLGCLV--KGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHP 212 (228)
T ss_dssp CC------CCSEEEEEEEE--EEEBSSCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEG
T ss_pred ccc-ccccCCCCEEEEEEE--ccEeCCCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEEC
Confidence 322 246789999999999 565 877 99999999764211111111111 13469999988866 9999999999
Q ss_pred CcceEEEEEE
Q psy2145 717 AGEAVSSTSL 726 (808)
Q Consensus 717 ~G~~~~s~~l 726 (808)
.|.......+
T Consensus 213 ~~~~~~~~~~ 222 (228)
T 3bae_H 213 ASSTKVDKKI 222 (228)
T ss_dssp GGTEEEEEEC
T ss_pred CCCCCEEEEc
Confidence 9987655543
No 342
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.73 E-value=5.2e-17 Score=161.10 Aligned_cols=164 Identities=16% Similarity=0.299 Sum_probs=116.5
Q ss_pred cccCCCceEEEEEEeeCCC--CCcEEEEEECC--Eec-------------------CCCCCeEEEee--CcEEEEEECCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGD--PTLKVEWFRNE--KPL-------------------EDSSRITTKHD--FGYVAMDLSHV 569 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~--P~~~v~W~k~g--~~l-------------------~~~~~~~~~~~--~~~~~L~I~~v 569 (808)
.+.+|++|+|.|.+ .+. +.+.|.|||.. ..+ ....|+.+..+ .+.++|.|.++
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (221)
T 3m8o_H 11 LVQPGGSLKLSCAA--SGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSL 88 (221)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSC
T ss_pred EEcCCCCEEEEEEc--ccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCC
Confidence 58899999999999 453 36789999732 111 01256766644 45678999999
Q ss_pred CCCCCEEEEEEEEeCC--eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 570 RAEDEGIYICKATNAL--GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~--G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
+.+|+|.|.|.+.|.. ........|.|...+. .+|.+....... .
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~p~v~~~~~~~-~ 135 (221)
T 3m8o_H 89 KSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASP--------------------------------TSPKVFPLSLCS-T 135 (221)
T ss_dssp CGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCC--------------------------------BCCEEEEEECCS-C
T ss_pred CHHHCEEEEEEEECCChhheECCCEEEEEecCCC--------------------------------CCCeEEEecCcc-c
Confidence 9999999999999874 2222334566653211 236555333322 2
Q ss_pred ccCCceEEEEEEEeeCC-CCC--eEEEEEECCEEcc----------CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 648 IMEGQSAHYDCRVVPVG-DPT--MRFEWFVNGVELK----------MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g-~P~--p~i~W~~~g~~l~----------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
.+|+.++|.|.+ .| .|. +.|.|++||..+. .+.+|.+. +.|.|..+..+|+|.|+|.|.
T Consensus 136 -~~g~~v~L~C~~--~~~~P~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~-----s~L~i~~~~~~d~g~ytC~v~ 207 (221)
T 3m8o_H 136 -QPDGNVVIACLV--QGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTS-----SQLTLPATQCLAGKSVTCHVK 207 (221)
T ss_dssp -CCTTEEEEEEEE--EEEBSSCSEEEEESCCSTTCEEEECCCEECSSSSCEEEE-----EEEEEEGGGSCTTCEEEEEEE
T ss_pred -ccCCCEEEEEEE--EeeECCCCEEEEEEECCEECceEEcCceeeCCCCcEEEE-----EEEEECHHHcCCCCeEEEEEE
Confidence 789999999999 56 776 5999999998772 33444433 369999999999999999999
Q ss_pred eCCcceE
Q psy2145 715 NRAGEAV 721 (808)
Q Consensus 715 N~~G~~~ 721 (808)
|..|...
T Consensus 208 ~~~~~~~ 214 (221)
T 3m8o_H 208 HYTNPSQ 214 (221)
T ss_dssp ETTSCCE
T ss_pred ECCCCce
Confidence 9987643
No 343
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.73 E-value=5.5e-17 Score=162.09 Aligned_cols=178 Identities=19% Similarity=0.294 Sum_probs=116.6
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC----------------CCCCeEEEee--CcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE----------------DSSRITTKHD--FGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~~~ 572 (808)
.+.+|++|+|.|.+ .+.+ .+.+.|||.. ..+. ...|+.+..+ .+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (232)
T 1dn0_B 11 LLKPSETLSLTCAV--YGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAA 88 (232)
T ss_dssp EECTTSCEEEEEEE--ESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEE--ccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCcc
Confidence 58899999999999 5554 6789999842 2110 1357776653 35678999999999
Q ss_pred CCEEEEEEEEe--CCee----EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCc
Q psy2145 573 DEGIYICKATN--ALGE----AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTS 646 (808)
Q Consensus 573 D~G~Y~C~a~N--~~G~----~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~ 646 (808)
|+|.|.|.+.+ ..|. ....+.|.|...+. .+|.+...... .
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~v~~~~p~-~ 135 (232)
T 1dn0_B 89 DTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSA--------------------------------SAPTLFPLVSC-E 135 (232)
T ss_dssp GCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCC--------------------------------BCCEEEEEECC--
T ss_pred cCEEEEEEEecCCcCCchhhhcccceEEEEccCCC--------------------------------CCCceEEeccc-c
Confidence 99999999984 2121 11235677764211 13554432222 2
Q ss_pred cccCC-ceEEEEEEEeeCCC-CCe-EEEEEE-CCEEccCCCcEEEEEeCC----EEEEEEccCCC--CCcEEEEEEEEeC
Q psy2145 647 EIMEG-QSAHYDCRVVPVGD-PTM-RFEWFV-NGVELKMGSRFHVQHDFG----YVTLDITKCVP--ADSGVYMCKAINR 716 (808)
Q Consensus 647 ~v~~G-~~v~l~C~v~~~g~-P~p-~i~W~~-~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~--~D~G~Y~C~A~N~ 716 (808)
.+.+| +.++|.|.+ .|. |.| .|.|++ ||..|.....+....+++ .+.|.|..... +|.|.|+|.|.|.
T Consensus 136 ~~~~g~~~v~L~C~~--~g~~P~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~ 213 (232)
T 1dn0_B 136 NSPSDTSSVAVGCLA--QDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHP 213 (232)
T ss_dssp -----CCSEEEEEEE--EEEBSSCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECT
T ss_pred ccCCCCCcEEEEEEE--EEEeCCCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeC
Confidence 35578 999999999 464 876 999999 999875400000000112 24789998887 8999999999999
Q ss_pred CcceEEEEEEEEE
Q psy2145 717 AGEAVSSTSLKVK 729 (808)
Q Consensus 717 ~G~~~~s~~l~V~ 729 (808)
.|.......|.|.
T Consensus 214 ~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 214 NGNKEKNVPLPVI 226 (232)
T ss_dssp TCCEEEEEECCC-
T ss_pred CCCcceeEecCCC
Confidence 9988777776654
No 344
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.73 E-value=9.4e-17 Score=166.42 Aligned_cols=198 Identities=14% Similarity=0.176 Sum_probs=128.8
Q ss_pred eecCceeecCCCeEEEEEEEeecCCC--CeEEEEeeCC--EEcc-----------------CCCceEEEe--cCceEEEE
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHNN--VPIK-----------------SGSRFTETN--NFGFVALD 244 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~g--~~l~-----------------~~~~~~~~~--~~~~~~L~ 244 (808)
..+..+.+.+|++|+|.|.+. +.+ .+.+.|||++ ..+. ...|+.+.. ..+..+|.
T Consensus 27 ~~p~~~~v~~G~~v~L~C~~~--~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 104 (291)
T 2gki_A 27 QQSGPELVKPGASVKMSCKAS--GYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYME 104 (291)
T ss_dssp EECCCEEECTTCCEEEEEEEE--SSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEE
T ss_pred EcCCcEEecCCCCEEEEEecc--CCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEE
Confidence 355678899999999999984 554 5789999952 2110 123454433 23466899
Q ss_pred EccCCCCCcEEEEEEEEeCc-e--e--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeec
Q psy2145 245 IMQCLPEDSGVYTCRAVNAL-G--Q--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFT 319 (808)
Q Consensus 245 I~~~~~~D~G~Y~C~a~n~~-g--~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~ 319 (808)
|.+++.+|+|.|.|.+.|.. | . ....+.|.|......... ... . .....++.+.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~---~~~-----------------~-~~~~~~~~v~ 163 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSG---GGG-----------------S-GGGGSDLVMS 163 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC-------------------------------------CCCEE
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccc---ccc-----------------C-CCCCccceEE
Confidence 99999999999999999974 2 1 112356777541000000 000 0 0001234555
Q ss_pred cCCCceEeecCCeEEEEEEEeecCCCcc------EEEEEEC--CEecc------------CCCcEEEEeeCcEEEEEEcc
Q psy2145 320 QPMRDIHVAENQAAHFEARLIPVGDSKL------KVTWLRN--GVPIQ------------ASNRVSTMHDFGYVALNFKY 379 (808)
Q Consensus 320 ~~~~~~~v~~G~~~~l~C~~~~~g~p~~------~v~W~~~--g~~l~------------~~~~~~~~~~~~~~~L~I~~ 379 (808)
..+....+.+|+.++|.|.+ .+.+.+ .+.|+|+ |..+. ...++....++...+|.|.+
T Consensus 164 ~~p~~~~v~~G~~v~L~C~~--~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 241 (291)
T 2gki_A 164 QSPSSLAVSAGEKVTMSCKS--SQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISS 241 (291)
T ss_dssp CSCSEEEEETTSCEEEEEEE--SSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred cCCCEEEEcCCCcEEEEEEc--CCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECC
Confidence 56667789999999999998 677765 8999996 32111 13566665566667899999
Q ss_pred CCCCCCeEEEEEEEcCCcceEE-EEEEEEEec
Q psy2145 380 TYPEDSGTYTCRAVNELGEAVT-SSTLFVESK 410 (808)
Q Consensus 380 v~~~d~G~Y~C~a~n~~g~~~~-~~~l~V~~~ 410 (808)
+..+|+|.|+|.|.|.....-. -..|.|...
T Consensus 242 v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~ 273 (291)
T 2gki_A 242 VQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHH 273 (291)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred CCHHHCEEEEEEEccCCceEEcCCEEEEEEee
Confidence 9999999999999985432222 255666654
No 345
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.73 E-value=1.9e-17 Score=169.62 Aligned_cols=175 Identities=17% Similarity=0.279 Sum_probs=120.7
Q ss_pred CeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEE--CCEec------------CCC----CCeEEEee-CcEEEE
Q psy2145 504 PVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFR--NEKPL------------EDS----SRITTKHD-FGYVAM 564 (808)
Q Consensus 504 P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k--~g~~l------------~~~----~~~~~~~~-~~~~~L 564 (808)
+.+..++..+ .+.+|++|+|.|.+ . .+.+.|.|+| .+..+ ... .|+.+..+ .+.++|
T Consensus 27 ~~v~~~p~~v-~v~~G~~v~L~C~~--~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL 102 (268)
T 3pl6_D 27 AGVSQTPSNK-VTEKGKYVELRCDP--I-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTL 102 (268)
T ss_dssp SSCBCCCSEE-EEETTCCEEEEEBC--B-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEE
T ss_pred ceeEeCCCEE-EecCCCCEEEEEEe--C-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEE
Confidence 3444444444 68899999999997 3 6788999999 22211 111 56666542 345689
Q ss_pred EECCCCCCCCEEEEEEEEeC--CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeec
Q psy2145 565 DLSHVRAEDEGIYICKATNA--LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLL 642 (808)
Q Consensus 565 ~I~~v~~~D~G~Y~C~a~N~--~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~ 642 (808)
.|.+++.+|+|.|.|.+.|. .+.......|.|...... ..+|.+....
T Consensus 103 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~------------------------------~~~P~v~~~~ 152 (268)
T 3pl6_D 103 KIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKN------------------------------VFPPEVAVFE 152 (268)
T ss_dssp EECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGG------------------------------CBCCEEEEEC
T ss_pred EECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCccc------------------------------ccCCceEEeC
Confidence 99999999999999999984 334444456777642111 1246555444
Q ss_pred CCCccccCCceEEEEEEEeeCCCCC-e-EEEEEECCEEccCCC----------------cEEEEEeCCEEEEEEccCCCC
Q psy2145 643 TGTSEIMEGQSAHYDCRVVPVGDPT-M-RFEWFVNGVELKMGS----------------RFHVQHDFGYVTLDITKCVPA 704 (808)
Q Consensus 643 ~~~~~v~~G~~v~l~C~v~~~g~P~-p-~i~W~~~g~~l~~~~----------------~~~~~~~~~~~~L~I~~v~~~ 704 (808)
.....+.+|+.++|.|.+ .|.|+ + .|.|+|||+++..+. .|.+ .+.|.|.....+
T Consensus 153 ~~~~~~~~g~~v~L~C~~--~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~s~l~i~~~~~~ 225 (268)
T 3pl6_D 153 PSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSL-----SSRLRVSATFWQ 225 (268)
T ss_dssp CCHHHHHHHSEEEEEEEE--EEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEE-----EEEEEEEHHHHS
T ss_pred CCcccccCCCceEEEEEE--CcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEE-----EEEEEEcHHHhc
Confidence 444457789999999999 56444 3 999999999986532 2222 136788888777
Q ss_pred C-cEEEEEEEEeCCcc
Q psy2145 705 D-SGVYMCKAINRAGE 719 (808)
Q Consensus 705 D-~G~Y~C~A~N~~G~ 719 (808)
| +|.|+|.|.|....
T Consensus 226 d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 226 NPRNHFRCQVQFYGLS 241 (268)
T ss_dssp CTTCEEEEEEEECCBC
T ss_pred cCCCEEEEEEEcCCCC
Confidence 7 99999999998654
No 346
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.73 E-value=1.9e-17 Score=167.11 Aligned_cols=179 Identities=17% Similarity=0.247 Sum_probs=121.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEEe--------------eccCcEEEEe-eCCeEEEEEccc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRPV--------------TIGHRFRPIH-DFGYVALDIIDT 115 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~l--------------~~~~r~~~~~-~~~~~~L~I~~~ 115 (808)
...|..+ .+.+|++|+|.|.+. +.|.+.|.|||. +..+ ....|+.+.. ..+.++|.|.++
T Consensus 5 ~~~p~~v-~v~~G~~v~L~C~~~--~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v 81 (245)
T 3nfj_J 5 HQWPATL-VQPVGSPLSLECTVE--GTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKL 81 (245)
T ss_dssp EEECSEE-EEETTCCEEEEEEEE--SCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSC
T ss_pred eCCCceE-EecCCCCEEEEEEec--CCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCC
Confidence 3446666 899999999999998 468889999992 2111 1124666654 356779999999
Q ss_pred CcCCCeeEEEEEEecCc------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe-
Q psy2145 116 IPEDSGTYTCRAVNLVG------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT- 188 (808)
Q Consensus 116 ~~~D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~- 188 (808)
+.+|+|.|+|.+.|..| .....+.|.|..... ...+|.+..
T Consensus 82 ~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~P~v~~~ 129 (245)
T 3nfj_J 82 LLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN--------------------------------KVFPPEVAVF 129 (245)
T ss_dssp CGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGG--------------------------------GCBCCEEEEE
T ss_pred ChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccC--------------------------------CCCCCceEee
Confidence 99999999999998332 222345666653110 133565554
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEe-------cCce----EEEEEccCCCCC-cEEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETN-------NFGF----VALDIMQCLPED-SGVY 256 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~-------~~~~----~~L~I~~~~~~D-~G~Y 256 (808)
.+....+.+|+.++|.|.+.+...+...+.|++||..+..+....... .++. ..|.|.....+| .|.|
T Consensus 130 ~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~Y 209 (245)
T 3nfj_J 130 EPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 209 (245)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEE
T ss_pred cCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeE
Confidence 444455667999999999964223345899999999987543221100 1222 368888888888 6799
Q ss_pred EEEEEeCcee
Q psy2145 257 TCRAVNALGQ 266 (808)
Q Consensus 257 ~C~a~n~~g~ 266 (808)
+|.|.|....
T Consensus 210 tC~v~~~~~~ 219 (245)
T 3nfj_J 210 RCQVQFYGLS 219 (245)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEECCCC
Confidence 9999986543
No 347
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.73 E-value=2.2e-17 Score=166.72 Aligned_cols=176 Identities=18% Similarity=0.234 Sum_probs=121.0
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--------------CCEEeecc----CcEEEEee-CCeEEEEEc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--------------NGRPVTIG----HRFRPIHD-FGYVALDII 113 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--------------~g~~l~~~----~r~~~~~~-~~~~~L~I~ 113 (808)
...|..+ .+.+|++++|.| .. +.+.+.|.||| ++..+..+ .|+.+..+ .+.++|.|.
T Consensus 6 ~~~p~~v-~v~~G~~v~L~C-~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~ 81 (245)
T 4ei6_B 6 LQIPSHQ-IIDMGQMVTLNC-DP--VSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQ 81 (245)
T ss_dssp EEECSEE-EEETTCCEEEEE-EC--CTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEEC
T ss_pred EeCCceE-EecCCCCEEEEE-Ec--CCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEEC
Confidence 4456667 899999999999 43 56788999999 33333222 67776653 456799999
Q ss_pred ccCcCCCeeEEEEEEecC----cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEE-e
Q psy2145 114 DTIPEDSGTYTCRAVNLV----GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFT-T 188 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~~----g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~-~ 188 (808)
+++.+|+|.|+|.+.+.. +.....+.|.|..... ...+|.+. .
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~p~~~~~ 129 (245)
T 4ei6_B 82 PTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK--------------------------------NVFPPEVAVF 129 (245)
T ss_dssp SCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGG--------------------------------GCBCCEEEEE
T ss_pred CCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccC--------------------------------CCCCceEEEe
Confidence 999999999999999532 2233445666653110 02455554 3
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEe-------cCce----EEEEEccCCCCC-cEE
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETN-------NFGF----VALDIMQCLPED-SGV 255 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~-------~~~~----~~L~I~~~~~~D-~G~ 255 (808)
.+....+.+|+.++|.|.+.+ ..|. ..|.|++||..+..+.+..... .++. ..|.|.....+| .|.
T Consensus 130 ~~~~~~~~~g~~v~l~C~~~g-~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ 208 (245)
T 4ei6_B 130 EPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNH 208 (245)
T ss_dssp CCCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCE
T ss_pred CCCcccccCCCceEEEEEEee-EeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCe
Confidence 445556778999999999964 2343 4899999999987643221110 1222 248888888888 999
Q ss_pred EEEEEEeCce
Q psy2145 256 YTCRAVNALG 265 (808)
Q Consensus 256 Y~C~a~n~~g 265 (808)
|+|.|.|...
T Consensus 209 ytC~v~~~~l 218 (245)
T 4ei6_B 209 FRCQVQFYGL 218 (245)
T ss_dssp EEEEEEECCB
T ss_pred EEEEEEECCC
Confidence 9999998543
No 348
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.72 E-value=3.1e-17 Score=161.92 Aligned_cols=185 Identities=16% Similarity=0.129 Sum_probs=116.1
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EE---c-------------cCCCceEEEecCceEEEEEccCC
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VP---I-------------KSGSRFTETNNFGFVALDIMQCL 249 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~---l-------------~~~~~~~~~~~~~~~~L~I~~~~ 249 (808)
..+..+.+.+|++|+|.|.+.+...+.+.+.|||.. .. + ....|+.+....+.++|.|.+++
T Consensus 4 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (215)
T 3nl4_H 4 EESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPT 83 (215)
T ss_dssp EEECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCC
T ss_pred EcCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCC
Confidence 355678899999999999995433456889999832 11 1 12356666666677889999999
Q ss_pred CCCcEEEEEEEEeCcee----EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCce
Q psy2145 250 PEDSGVYTCRAVNALGQ----AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDI 325 (808)
Q Consensus 250 ~~D~G~Y~C~a~n~~g~----~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~ 325 (808)
.+|+|.|.|.+.|..+. ....+.|.|... ...+|.+.......
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~---------------------------------~~~~P~i~~~~~~~ 130 (215)
T 3nl4_H 84 TEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSG---------------------------------QPKAPSVFPLAPCC 130 (215)
T ss_dssp GGGCEEEEEEEECSSSSCEEEECCCEEEEECSS---------------------------------CCBCCEEEEECCCT
T ss_pred cccCEEEEEEEecCCCccceEEcCCEEEEEeCC---------------------------------CcCCCEEEEecCCc
Confidence 99999999999987542 233456777531 11245554323333
Q ss_pred EeecCCeEEEEEEEeecCCCccEEEEEECCEeccCCCcEEEEeeCc-EEEEEEccCCCCCCeEEEEEEEcCCcceEEEEE
Q psy2145 326 HVAENQAAHFEARLIPVGDSKLKVTWLRNGVPIQASNRVSTMHDFG-YVALNFKYTYPEDSGTYTCRAVNELGEAVTSST 404 (808)
Q Consensus 326 ~v~~G~~~~l~C~~~~~g~p~~~v~W~~~g~~l~~~~~~~~~~~~~-~~~L~I~~v~~~d~G~Y~C~a~n~~g~~~~~~~ 404 (808)
.+.+|+.++|.|.+.....+...+.|+++|..+...........++ +.......+...| |.|+|.|.|..|.......
T Consensus 131 ~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~ 209 (215)
T 3nl4_H 131 GDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKT 209 (215)
T ss_dssp TCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEE
T ss_pred cccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEe
Confidence 4567999999999942112346788999997553221111122223 2221224566677 9999999999887766555
Q ss_pred EE
Q psy2145 405 LF 406 (808)
Q Consensus 405 l~ 406 (808)
|.
T Consensus 210 l~ 211 (215)
T 3nl4_H 210 VA 211 (215)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 349
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.72 E-value=6.4e-17 Score=164.36 Aligned_cols=175 Identities=15% Similarity=0.192 Sum_probs=118.3
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeC--CEEee-----------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKN--GRPVT-----------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~--g~~l~-----------------~~~r~~~~~~--~~~~~ 109 (808)
+..|..+ .+.+|++|+|.|.+.+ .+ .+.|.|||+ |..+. ...|+.+..+ .+..+
T Consensus 10 ~~~p~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 86 (261)
T 2xqy_G 10 LQQPGAE-LVKPGASVKMSCKASG--YSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVY 86 (261)
T ss_dssp EECCSEE-EECTTCCEEEEEEEES--SCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEE
T ss_pred EECCCCE-EEcCCCCEEEEEEeCC--cccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEE
Confidence 4557777 8999999999999984 34 578999986 32211 1357777654 36679
Q ss_pred EEEcccCcCCCeeEEEEEEecCcce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGFA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
|.|.+++.+|+|.|.|.+.|..+.. ...+.|.|.... ..+|.+
T Consensus 87 L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~----------------------------------~~~P~v 132 (261)
T 2xqy_G 87 IQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK----------------------------------TTAPSV 132 (261)
T ss_dssp EEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC----------------------------------CBCCEE
T ss_pred EEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCC----------------------------------CCCCeE
Confidence 9999999999999999999864311 123567665311 235655
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCc---eEEEEEccCCCCCcEEEEEEEEe
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFG---FVALDIMQCLPEDSGVYTCRAVN 262 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n 262 (808)
........+.+|+.++|.|.+.+ ..|.+ .|.|++++..+...........+. ...|.|..+..+| |.|+|.|.|
T Consensus 133 ~~~~p~~~v~~g~~v~L~C~~~g-~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n 210 (261)
T 2xqy_G 133 YPLAPVCGDTTGSSVTLGCLVKG-YFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAH 210 (261)
T ss_dssp EEECCCCC--CCSEEEEEEEEEE-EBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEE
T ss_pred EEeCCCccccCCCcEEEEEEEEe-EeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEE
Confidence 54433334678999999999953 23554 999999998753211001111111 2369999998888 999999999
Q ss_pred Ccee
Q psy2145 263 ALGQ 266 (808)
Q Consensus 263 ~~g~ 266 (808)
....
T Consensus 211 ~~~~ 214 (261)
T 2xqy_G 211 PASS 214 (261)
T ss_dssp GGGT
T ss_pred CCCC
Confidence 6554
No 350
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.72 E-value=4.1e-17 Score=164.12 Aligned_cols=176 Identities=15% Similarity=0.171 Sum_probs=120.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--------------CCEEeec---cCcEEEEee-CCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--------------NGRPVTI---GHRFRPIHD-FGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--------------~g~~l~~---~~r~~~~~~-~~~~~L~I~~ 114 (808)
...|..+ .+.+|++|+|.|.+. .+.+.|.||| ++..... ..|+.+..+ .+.++|.|.+
T Consensus 6 ~~~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 81 (240)
T 3q5y_A 6 VQSPRHI-IKEKGGRSVLTCIPI---SGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSA 81 (240)
T ss_dssp EEECSEE-EEETTCCEEEEEECC---TTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECS
T ss_pred ccCccee-eecCCCcEEEEEEeC---CCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECc
Confidence 3456666 899999999999986 3677999999 2222221 257776553 4567999999
Q ss_pred cCcCCCeeEEEEEEec---CcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe-ec
Q psy2145 115 TIPEDSGTYTCRAVNL---VGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT-SL 190 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~---~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~ 190 (808)
++.+|+|.|+|.+.+. .......+.|.|..... ...+|.+.. .+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~p~~~~~~~ 129 (240)
T 3q5y_A 82 LELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLR--------------------------------NVTPPKVSLFEP 129 (240)
T ss_dssp CCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGG--------------------------------GCBCCEEEEECC
T ss_pred CChhHCEEEEEEEccCCCcceEEcCCEEEEEecccc--------------------------------CCCCCeeEEeCC
Confidence 9999999999999832 12223345666653110 134565554 44
Q ss_pred CceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceE---EEecCceE----EEEEccCCCCC-cEEEEEEEE
Q psy2145 191 KNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFT---ETNNFGFV----ALDIMQCLPED-SGVYTCRAV 261 (808)
Q Consensus 191 ~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~---~~~~~~~~----~L~I~~~~~~D-~G~Y~C~a~ 261 (808)
....+.+|+.++|.|.+.+ ..|.+ .+.|+|||.++..+.+.. ....++.+ .|.|.....+| .|.|+|.|.
T Consensus 130 ~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~ 208 (240)
T 3q5y_A 130 SKAEIANKQKATLVCLARG-FFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQ 208 (240)
T ss_dssp CHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEE
T ss_pred chhhcccCCceEEEEEEee-EECCCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEE
Confidence 5556778999999999964 24544 899999999987543221 12223332 48999998888 779999999
Q ss_pred eCce
Q psy2145 262 NALG 265 (808)
Q Consensus 262 n~~g 265 (808)
|...
T Consensus 209 ~~~~ 212 (240)
T 3q5y_A 209 FHGL 212 (240)
T ss_dssp ECCB
T ss_pred cCCC
Confidence 8644
No 351
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.72 E-value=1.1e-16 Score=164.93 Aligned_cols=184 Identities=17% Similarity=0.321 Sum_probs=124.8
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec--------------C---CCCCeEEEee-CcEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL--------------E---DSSRITTKHD-FGYV 562 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l--------------~---~~~~~~~~~~-~~~~ 562 (808)
.+.+...+..+ .+.+|++|+|.|.+ .+.|.+.|.|+|++ ..+ . ...|+.+..+ .+..
T Consensus 24 ~~~v~~~p~~v-~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 100 (279)
T 2wbj_D 24 GAVVSQHPSWV-ISKSGTSVKIECRS--LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLS 100 (279)
T ss_dssp CCCEEEECSEE-EEETTSCEEEEEEE--SSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEE
T ss_pred cceEEeCCCeE-EecCCCeEEEEEEe--CCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEE
Confidence 34555555554 68999999999999 78899999999864 111 0 1356766643 4567
Q ss_pred EEEECCCCCCCCEEEEEEEEeCCe------eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCC
Q psy2145 563 AMDLSHVRAEDEGIYICKATNALG------EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKP 636 (808)
Q Consensus 563 ~L~I~~v~~~D~G~Y~C~a~N~~G------~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P 636 (808)
+|.|.+++.+|+|.|.|.|.|..| .....+.|.|..... ...+|
T Consensus 101 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P 150 (279)
T 2wbj_D 101 TLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK------------------------------NVFPP 150 (279)
T ss_dssp EEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG------------------------------GCBCC
T ss_pred EEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC------------------------------CCCCC
Confidence 899999999999999999999432 112235677764211 01246
Q ss_pred eEEeecCCCccccCCceEEEEEEEeeCCC-CC-eEEEEEECCEEccCCCcEE---EE-----EeCC---EEEEEEccCCC
Q psy2145 637 IFTQLLTGTSEIMEGQSAHYDCRVVPVGD-PT-MRFEWFVNGVELKMGSRFH---VQ-----HDFG---YVTLDITKCVP 703 (808)
Q Consensus 637 ~~~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~---~~-----~~~~---~~~L~I~~v~~ 703 (808)
.+.........+.+|+.++|.|.+ .|. |. +.|.|+|||++|..+.... .. .++. .+.|.|.....
T Consensus 151 ~v~~~~~~~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~ 228 (279)
T 2wbj_D 151 EVAVFEPSEAEISHTQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFW 228 (279)
T ss_dssp EEEEEECCHHHHHHHSCCEEEEEE--EEEBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTT
T ss_pred EEEEECCCcccccCCCceEEEEEE--eeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHh
Confidence 665443333456689999999999 565 54 7999999999987542211 00 1111 23588888777
Q ss_pred CC-cEEEEEEEEeCCcceE
Q psy2145 704 AD-SGVYMCKAINRAGEAV 721 (808)
Q Consensus 704 ~D-~G~Y~C~A~N~~G~~~ 721 (808)
.| .|.|+|.|.|......
T Consensus 229 ~d~~~~YtC~v~n~~~~~~ 247 (279)
T 2wbj_D 229 QNPRNHFRCQVQFYGLSEN 247 (279)
T ss_dssp TCTTCEEEEEEEECCBCTT
T ss_pred ccCCCEEEEEEEeCCCCCC
Confidence 64 7889999999876543
No 352
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.72 E-value=1.7e-17 Score=167.93 Aligned_cols=177 Identities=13% Similarity=0.189 Sum_probs=105.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCC--EE---ee--------------ccCcEEEEee--CCeEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNG--RP---VT--------------IGHRFRPIHD--FGYVA 109 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g--~~---l~--------------~~~r~~~~~~--~~~~~ 109 (808)
+.+|..+ .+.+|++|+|.|.+.+ .+ .+.+.|||.. .. |. ...|+.+..+ .+.++
T Consensus 4 l~qp~~~-~v~~G~~v~L~C~~~~--~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 80 (257)
T 3bn9_D 4 LVQSGGG-LVKPGGSLRLSCAASG--FTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLY 80 (257)
T ss_dssp EEEECCE-EECTTCEEEEEEEEES--SCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEE
T ss_pred EEccCCE-EEcCCCcEEEEEEecc--ccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEE
Confidence 4456677 8999999999999984 33 5789999843 21 10 1357777665 46679
Q ss_pred EEEcccCcCCCeeEEEEEEecCcc-------------eEEEEEEEEecCCCccccccccccceeeeeecccccccccccc
Q psy2145 110 LDIIDTIPEDSGTYTCRAVNLVGF-------------AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYI 176 (808)
Q Consensus 110 L~I~~~~~~D~G~Y~C~a~n~~g~-------------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (808)
|.|.+++.+|+|.|.|.+.|..|. ....+.|.|....
T Consensus 81 L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~------------------------------ 130 (257)
T 3bn9_D 81 LQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS------------------------------ 130 (257)
T ss_dssp EEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC------------------------------
T ss_pred EEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC------------------------------
Confidence 999999999999999999987651 1123467775311
Q ss_pred ccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEecCce----EEEEEccCCCC
Q psy2145 177 EETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETNNFGF----VALDIMQCLPE 251 (808)
Q Consensus 177 ~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~~~~~----~~L~I~~~~~~ 251 (808)
..+|.+........+.+|+.++|.|.+.+ ..|.+ .|.|+++|..+...........+|. ..|.|.++..+
T Consensus 131 ----~~~P~v~~~~p~~~~~~g~~v~L~C~~~g-~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~ 205 (257)
T 3bn9_D 131 ----TKGPSVFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLG 205 (257)
T ss_dssp ----CBCCEECCCCC-----------CCCEEEE-EBSSCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC-----
T ss_pred ----CcCCcEEEecCcccccCCCcEEEEEEEee-EECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccC
Confidence 23555544333334678999999999963 33655 9999999987432110011122221 35888888877
Q ss_pred CcEEEEEEEEeCceeEE
Q psy2145 252 DSGVYTCRAVNALGQAV 268 (808)
Q Consensus 252 D~G~Y~C~a~n~~g~~~ 268 (808)
| |.|+|.|.|......
T Consensus 206 ~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 206 T-QTYICNVNHKPSNTK 221 (257)
T ss_dssp ---CEEEEEEEGGGTEE
T ss_pred C-CeEEEEEEecCCCcC
Confidence 8 999999999654433
No 353
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.72 E-value=4.4e-17 Score=166.94 Aligned_cols=178 Identities=16% Similarity=0.223 Sum_probs=120.0
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe--CCEE------------eecc----CcEEEEee-CCeEEEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK--NGRP------------VTIG----HRFRPIHD-FGYVALDI 112 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~--~g~~------------l~~~----~r~~~~~~-~~~~~L~I 112 (808)
+...|..+ .+.+|++++|.|.+. .+.+.|.||| .+.. ...+ .|+.+..+ .+..+|.|
T Consensus 29 v~~~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I 104 (268)
T 3pl6_D 29 VSQTPSNK-VTEKGKYVELRCDPI---SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKI 104 (268)
T ss_dssp CBCCCSEE-EEETTCCEEEEEBCB---TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEE
T ss_pred eEeCCCEE-EecCCCCEEEEEEeC---CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEE
Confidence 34456666 899999999999986 4677999999 2221 1111 67776653 45679999
Q ss_pred cccCcCCCeeEEEEEEec--CcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe-e
Q psy2145 113 IDTIPEDSGTYTCRAVNL--VGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT-S 189 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~--~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~ 189 (808)
.+++.+|+|.|+|.+.|. .+.......|.|..... ...+|.+.. .
T Consensus 105 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~P~v~~~~ 152 (268)
T 3pl6_D 105 QRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLK--------------------------------NVFPPEVAVFE 152 (268)
T ss_dssp CSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGG--------------------------------GCBCCEEEEEC
T ss_pred CCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcc--------------------------------cccCCceEEeC
Confidence 999999999999999974 23333445676653211 123565544 4
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEE-------EecCce----EEEEEccCCCCC-cEEEE
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTE-------TNNFGF----VALDIMQCLPED-SGVYT 257 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~-------~~~~~~----~~L~I~~~~~~D-~G~Y~ 257 (808)
+....+.+|+.++|.|.+.+...++..|.|+|||..+..+.+... ...++. ..|.|.....+| .|.|+
T Consensus 153 ~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~Yt 232 (268)
T 3pl6_D 153 PSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFR 232 (268)
T ss_dssp CCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEE
T ss_pred CCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEE
Confidence 555667789999999999642222339999999999865422110 001121 257888887777 99999
Q ss_pred EEEEeCce
Q psy2145 258 CRAVNALG 265 (808)
Q Consensus 258 C~a~n~~g 265 (808)
|.|.|...
T Consensus 233 C~v~~~~l 240 (268)
T 3pl6_D 233 CQVQFYGL 240 (268)
T ss_dssp EEEEECCB
T ss_pred EEEEcCCC
Confidence 99998643
No 354
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=168.07 Aligned_cols=185 Identities=17% Similarity=0.209 Sum_probs=112.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CE---Eeec-c-------------CcEEEE--eeCCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GR---PVTI-G-------------HRFRPI--HDFGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~---~l~~-~-------------~r~~~~--~~~~~~~L~ 111 (808)
...|.++ .+.+|++|+|.|.+. +.+.+.+.|||. +. .+.. . .|+... ...+.++|.
T Consensus 6 ~~~p~~~-~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 6 EGRTKSV-IRQTGSSAEITCDLA--EGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp -----CE-EEETTCCEEEECCC-------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred ccCCcee-EecCCCcEEEEEEEc--cCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 3456677 899999999999998 466789999992 21 1111 0 022221 123445799
Q ss_pred EcccCcCCCeeEEEEEEecCc---ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG---FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g---~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
|.+++.+|+|.|.|.+.|..+ .....+.|.|........... ........+|.+..
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~---------------------~~~~~~~~~~~v~~ 141 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAK---------------------KDAAKKDGAQKVTQ 141 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC---------------------------------------CEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccc---------------------cccccccCCeeeEE
Confidence 999999999999999998766 233446677764321000000 00000022577788
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--EEcc------------CCCceEEEe--cCceEEEEEccCCCCC
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--VPIK------------SGSRFTETN--NFGFVALDIMQCLPED 252 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~~l~------------~~~~~~~~~--~~~~~~L~I~~~~~~D 252 (808)
.+..+.+.+|++|+|.|.+.+ ..+.+.+.|||++ ..+. ...++.+.. .....+|.|.+++.+|
T Consensus 142 ~p~~~~v~~G~~v~L~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 220 (259)
T 3omz_A 142 AQSSVSMPVRKAVTLNCLYET-SWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLED 220 (259)
T ss_dssp CCCCEEEETTCCEEECCEEEC-CCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGG
T ss_pred eCCEEEEcCCCCEEEEEECCC-ccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhH
Confidence 888899999999999998842 3478899999943 1110 123444442 2234579999999999
Q ss_pred cEEEEEEEEe
Q psy2145 253 SGVYTCRAVN 262 (808)
Q Consensus 253 ~G~Y~C~a~n 262 (808)
+|.|.|.|.+
T Consensus 221 sG~Y~C~~~~ 230 (259)
T 3omz_A 221 SAKYFCALGE 230 (259)
T ss_dssp CSEEEEEEES
T ss_pred CEEEEEEEeC
Confidence 9999999985
No 355
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.71 E-value=3.9e-17 Score=166.35 Aligned_cols=189 Identities=17% Similarity=0.180 Sum_probs=112.3
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEEc---cC-C-------------CceEE--EecCceE
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVPI---KS-G-------------SRFTE--TNNFGFV 241 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~l---~~-~-------------~~~~~--~~~~~~~ 241 (808)
+|.+...+..+.+.+|++|+|.|.+ .+.+.+.+.|||. +... .. . .++.. ....+..
T Consensus 2 s~~v~~~p~~~~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 79 (259)
T 3omz_A 2 SSNLEGRTKSVIRQTGSSAEITCDL--AEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNL 79 (259)
T ss_dssp ---------CEEEETTCCEEEECCC-------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCC
T ss_pred ccccccCCceeEecCCCcEEEEEEE--ccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeE
Confidence 4566777888999999999999999 5677889999992 2111 00 0 01111 1122344
Q ss_pred EEEEccCCCCCcEEEEEEEEeCce---eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCee
Q psy2145 242 ALDIMQCLPEDSGVYTCRAVNALG---QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVF 318 (808)
Q Consensus 242 ~L~I~~~~~~D~G~Y~C~a~n~~g---~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~ 318 (808)
+|.|.+++.+|+|.|.|.+.|..+ .....+.|.|........... ........+|.+
T Consensus 80 ~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~--------------------~~~~~~~~~~~v 139 (259)
T 3omz_A 80 RMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAK--------------------KDAAKKDGAQKV 139 (259)
T ss_dssp EEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC--------------------------------------CEE
T ss_pred EEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccc--------------------cccccccCCeee
Confidence 799999999999999999999766 333456777765320000000 000000124567
Q ss_pred ccCCCceEeecCCeEEEEEEEeecC-CCccEEEEEECC--Eecc------------CCCcEEEEe--eCcEEEEEEccCC
Q psy2145 319 TQPMRDIHVAENQAAHFEARLIPVG-DSKLKVTWLRNG--VPIQ------------ASNRVSTMH--DFGYVALNFKYTY 381 (808)
Q Consensus 319 ~~~~~~~~v~~G~~~~l~C~~~~~g-~p~~~v~W~~~g--~~l~------------~~~~~~~~~--~~~~~~L~I~~v~ 381 (808)
...+....+.+|+.++|.|.+ .+ .+.+.+.|+|++ ..+. ...++.+.. ......|.|.++.
T Consensus 140 ~~~p~~~~v~~G~~v~L~C~~--~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 217 (259)
T 3omz_A 140 TQAQSSVSMPVRKAVTLNCLY--ETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQ 217 (259)
T ss_dssp ECCCCCEEEETTCCEEECCEE--ECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCC
T ss_pred EEeCCEEEEcCCCCEEEEEEC--CCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCC
Confidence 777778889999999999987 45 478999999943 1110 123444432 2234469999999
Q ss_pred CCCCeEEEEEEEcC
Q psy2145 382 PEDSGTYTCRAVNE 395 (808)
Q Consensus 382 ~~d~G~Y~C~a~n~ 395 (808)
.+|+|.|.|.+.+.
T Consensus 218 ~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 218 LEDSAKYFCALGES 231 (259)
T ss_dssp GGGCSEEEEEEESC
T ss_pred hhHCEEEEEEEeCc
Confidence 99999999999853
No 356
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.71 E-value=6.2e-17 Score=162.95 Aligned_cols=179 Identities=15% Similarity=0.183 Sum_probs=117.6
Q ss_pred cccCCCceEEEEEEeeCCC--CCcEEEEEECC--EecC-----------------CCCCeEEEeeC--cEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGD--PTLKVEWFRNE--KPLE-----------------DSSRITTKHDF--GYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~--P~~~v~W~k~g--~~l~-----------------~~~~~~~~~~~--~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+. +.+.|.|+|.. ..+. ...|+.+..+. +.++|.|.+++.
T Consensus 12 ~~~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 89 (242)
T 1hxm_B 12 TKTLSKTARLECVV--SGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEK 89 (242)
T ss_dssp EEETTCCEEEEEEE--ESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCG
T ss_pred EecCCCcEEEEEEe--CCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCc
Confidence 68899999999999 453 67889999842 2110 24577666543 467899999999
Q ss_pred CCCEEEEEEEEeCCe-----e--EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC
Q psy2145 572 EDEGIYICKATNALG-----E--AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG 644 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G-----~--~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~ 644 (808)
+|+|.|.|.+.|..+ . ......|.|...+... ..+|........
T Consensus 90 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~-----------------------------~~~p~~~v~~p~ 140 (242)
T 1hxm_B 90 QDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDA-----------------------------DVSPKPTIFLPS 140 (242)
T ss_dssp GGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCS-----------------------------CCSCBCCCCCCC
T ss_pred ccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCC-----------------------------CcCCCceEECCC
Confidence 999999999998631 1 1123567776532100 001111111122
Q ss_pred CccccCCceEEEEEEEeeCCC-CC-eEEEEEECCE-EccCCCcE-EEEEeCC---EEEEEEccCCCCCcEEEEEEEEeCC
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGD-PT-MRFEWFVNGV-ELKMGSRF-HVQHDFG---YVTLDITKCVPADSGVYMCKAINRA 717 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~-P~-p~i~W~~~g~-~l~~~~~~-~~~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~ 717 (808)
...+.+|+.++|.|.+ .|. |. +.|.|++||. .+..+..- ....++. .+.|.|..+.. | |.|+|.|.|..
T Consensus 141 ~~~~~~g~~v~L~C~~--~g~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~ 216 (242)
T 1hxm_B 141 IAETKLQKAGTYLCLL--EKFFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHEN 216 (242)
T ss_dssp GGGGGSSSCEEEEEEE--EEESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETT
T ss_pred hhhcccCCCceEEEEE--eeEECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCC
Confidence 2456789999999999 565 64 8999999997 56432100 0111111 24799988775 5 99999999999
Q ss_pred cceEEEEEEEE
Q psy2145 718 GEAVSSTSLKV 728 (808)
Q Consensus 718 G~~~~s~~l~V 728 (808)
|....+..|.+
T Consensus 217 ~~~~~~~~~~~ 227 (242)
T 1hxm_B 217 NKNGVDQEIIF 227 (242)
T ss_dssp SGGGSCEEEEE
T ss_pred CCCCceeEeec
Confidence 98766666655
No 357
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.71 E-value=4.9e-17 Score=138.05 Aligned_cols=95 Identities=21% Similarity=0.442 Sum_probs=85.4
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCC--CCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDS--SRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~--~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
..||.|...+.++ .+.+|+.+.|.|.+ .|.|.|.|+|+|||+.|... .++.+...++..+|.|.+++.+|+|.|+
T Consensus 3 ~~PP~i~~~p~~~-~v~~G~~~~l~C~~--~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 79 (100)
T 3knb_A 3 GIPPKIEALPSDI-SIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYT 79 (100)
T ss_dssp CEEEEECCCCSEE-EEETTSEEEEEEEE--EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEeCCCcE-EEeCCCeEEEEEEE--EEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEE
Confidence 3578998888876 68999999999999 79999999999999999765 3678888888889999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEe
Q psy2145 579 CKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~ 598 (808)
|.|.|..|..++++.|.|+.
T Consensus 80 C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 80 LSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCEEEEEEEEEEEE
Confidence 99999999999999999874
No 358
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.71 E-value=3.1e-17 Score=163.73 Aligned_cols=178 Identities=13% Similarity=0.147 Sum_probs=117.6
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCC--ceEEEEeCCEEe-eccCcEEEEeeCC----eEEEEEcccCcCCCeeEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSN--LKVEWFKNGRPV-TIGHRFRPIHDFG----YVALDIIDTIPEDSGTYT 124 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~--~~v~W~~~g~~l-~~~~r~~~~~~~~----~~~L~I~~~~~~D~G~Y~ 124 (808)
++..|..+ .+.+|+.++|.|.+.+. .|. ..|.|+++|..+ ............+ ..+|.|.++..+|+|.|+
T Consensus 16 ~~~~p~~~-~v~~G~~v~L~C~~~g~-~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~ 93 (231)
T 2w59_A 16 YAIPPSPG-ELYISLDAKLRCLVVNL-PSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFT 93 (231)
T ss_dssp EEECCCHH-HHHTSCCCEEEEEEEEE-SCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChh-hcccCCceEEEEEEeCc-cCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEE
Confidence 34567776 78899999999999862 453 499999999887 3322222111222 247999999999999999
Q ss_pred EEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEE
Q psy2145 125 CRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFE 204 (808)
Q Consensus 125 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~ 204 (808)
|.|.|..+... +.+.|.... ....+|.+...+.......|..++|.
T Consensus 94 C~~~~~~~~~~--~~~~v~~~~--------------------------------~~~~~P~v~v~~~~~~~~~~~~~~L~ 139 (231)
T 2w59_A 94 CTVQHEELPLP--LSKSVYRNT--------------------------------GPTTPPLIYPFAPHPEELSLSRVTLS 139 (231)
T ss_dssp EEEECTTCSSC--EEEEECCCC--------------------------------SCCBCCEEEEECCCGGGGGSSEEEEE
T ss_pred EEEEcCCCCCc--eEEEEecCC--------------------------------CCCcCCEEEEeCCCHHHhccCceEEE
Confidence 99999876533 334342110 01246666544332222345679999
Q ss_pred EEEeecCCCCeEEEEeeCCEEccCCCce----EEE--------ec-Cce---EEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 205 CRLIPVSDNTMKVEWFHNNVPIKSGSRF----TET--------NN-FGF---VALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 205 C~~~~~~~p~~~v~W~~~g~~l~~~~~~----~~~--------~~-~~~---~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
|.+.+...+.+.|.|+|||..+..+... ... .+ +.+ ..|.|.....+|.|.|+|+|.|...
T Consensus 140 C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 140 CLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp EEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 9996422235899999999998655311 111 22 221 3588888888899999999999654
No 359
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.70 E-value=1e-15 Score=147.26 Aligned_cols=164 Identities=12% Similarity=0.155 Sum_probs=112.7
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcc
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGF 133 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 133 (808)
..|...+.|.+|++++|.|.+ +.+.|.+.|+|++.+..+ .+.. .+.+...|.|.+++.+|+|.|.|.|.|..|.
T Consensus 11 ~pp~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~~~--~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 84 (210)
T 1gsm_A 11 EPPEPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GAVQ--SDTGRSVLTVRNASLSAAGTRVCVGSCGGRT 84 (210)
T ss_dssp ESCCSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CCEE--EESSEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred eCCCCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---CcEE--ecCCccEEEECccCcccCceEEEEEEeCCCc
Confidence 344441388999999999999 433343399999966444 2222 2355568999999999999999999999888
Q ss_pred eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCC
Q psy2145 134 AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDN 213 (808)
Q Consensus 134 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p 213 (808)
....+.|+|+..+. .+.+.+. .+.+|+.+ |.|.+.+ ..|
T Consensus 85 ~~~~~~ltV~~~P~-------------------------------------~~~i~~~--~~~~g~~~-l~C~a~g-~~P 123 (210)
T 1gsm_A 85 FQHTVQLLVYAFPN-------------------------------------QLTVSPA--ALVPGDPE-VACTAHK-VTP 123 (210)
T ss_dssp EEEEEEEEEEBCCS-------------------------------------EEEEESS--SBCTTCCE-EEEEEEE-EBC
T ss_pred eEEEEEEEEEecCC-------------------------------------CcEEccc--eEEeCCce-EEEEeCC-CCC
Confidence 88889999974321 1222332 56788888 9999964 235
Q ss_pred ----CeEEEEeeCCEEccCCCceE--EE--------ecCce----EEEEEccCCCCCcEEEEEEEEeCc
Q psy2145 214 ----TMKVEWFHNNVPIKSGSRFT--ET--------NNFGF----VALDIMQCLPEDSGVYTCRAVNAL 264 (808)
Q Consensus 214 ----~~~v~W~~~g~~l~~~~~~~--~~--------~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~ 264 (808)
.++|.|||||.+|....... .. ..... .+|.+.....+|.+.|+|+|.+..
T Consensus 124 ~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L 192 (210)
T 1gsm_A 124 VDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRL 192 (210)
T ss_dssp CCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEE
T ss_pred CCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeC
Confidence 46999999999996442111 10 01111 235555666666689999999854
No 360
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.70 E-value=2.3e-17 Score=164.66 Aligned_cols=179 Identities=15% Similarity=0.215 Sum_probs=117.4
Q ss_pred CCee-eecCCCcccccCCCceEEEEEEeeCC-CCC--cEEEEEECCEec-CCCCCeEEEeeCc----EEEEEECCCCCCC
Q psy2145 503 RPVF-TKPLQNIDAVEEGKNAHFSCRLIPVG-DPT--LKVEWFRNEKPL-EDSSRITTKHDFG----YVAMDLSHVRAED 573 (808)
Q Consensus 503 ~P~f-~~~~~~~~~v~~G~~v~l~C~v~~~g-~P~--~~v~W~k~g~~l-~~~~~~~~~~~~~----~~~L~I~~v~~~D 573 (808)
+|.+ +.++... .+.+|+.++|.|.+ .| .|. ..|+|+++|+.+ ...........++ ...|.|.++..+|
T Consensus 12 ~P~v~~~~p~~~-~v~~G~~v~L~C~~--~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D 88 (231)
T 2w59_A 12 PIQLYAIPPSPG-ELYISLDAKLRCLV--VNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLS 88 (231)
T ss_dssp CCEEEEECCCHH-HHHTSCCCEEEEEE--EEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHT
T ss_pred CCEEEEeCcChh-hcccCCceEEEEEE--eCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccC
Confidence 4443 4444443 57899999999999 56 463 499999999887 4332222121222 2369999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
+|.|+|.|.|..+.... .+.|..... ...+|.+.........+ .|..
T Consensus 89 ~g~Y~C~~~~~~~~~~~--~~~v~~~~~------------------------------~~~~P~v~v~~~~~~~~-~~~~ 135 (231)
T 2w59_A 89 GERFTCTVQHEELPLPL--SKSVYRNTG------------------------------PTTPPLIYPFAPHPEEL-SLSR 135 (231)
T ss_dssp TCCEEEEEECTTCSSCE--EEEECCCCS------------------------------CCBCCEEEEECCCGGGG-GSSE
T ss_pred CCEEEEEEEcCCCCCce--EEEEecCCC------------------------------CCcCCEEEEeCCCHHHh-ccCc
Confidence 99999999998875333 333322100 01235544433322233 3567
Q ss_pred EEEEEEEeeCCC-C-CeEEEEEECCEEccCCCcEE----EE--------Ee-CCE---EEEEEccCCCCCcEEEEEEEEe
Q psy2145 654 AHYDCRVVPVGD-P-TMRFEWFVNGVELKMGSRFH----VQ--------HD-FGY---VTLDITKCVPADSGVYMCKAIN 715 (808)
Q Consensus 654 v~l~C~v~~~g~-P-~p~i~W~~~g~~l~~~~~~~----~~--------~~-~~~---~~L~I~~v~~~D~G~Y~C~A~N 715 (808)
++|.|.+ .|. | .+.|.|+|||+.|..+.... .. .+ +.+ +.|.|.....+|.|.|+|.|.|
T Consensus 136 ~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n 213 (231)
T 2w59_A 136 VTLSCLV--RGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVH 213 (231)
T ss_dssp EEEEEEE--EEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEEC
T ss_pred eEEEEEE--EeccCCCcEEEEEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEc
Confidence 9999999 564 4 47999999999997654211 11 22 222 5688888888889999999999
Q ss_pred CCcc
Q psy2145 716 RAGE 719 (808)
Q Consensus 716 ~~G~ 719 (808)
....
T Consensus 214 ~~l~ 217 (231)
T 2w59_A 214 EALP 217 (231)
T ss_dssp TTST
T ss_pred CCCC
Confidence 9765
No 361
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=1.5e-16 Score=160.12 Aligned_cols=188 Identities=16% Similarity=0.125 Sum_probs=122.5
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee--------------ccCcEEEEeeC--CeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT--------------IGHRFRPIHDF--GYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~--------------~~~r~~~~~~~--~~~~L~ 111 (808)
...|..+ .+.+|++++|.|.+.+...+.+.|.|||+. . .+. ...|+.+..+. +..+|.
T Consensus 5 ~q~p~~v-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 5 EQPQISS-TKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp ECCCSEE-EEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred CcCCceE-EecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4456677 899999999999998522266799999842 2 121 24677776544 577999
Q ss_pred EcccCcCCCeeEEEEEEecCc-c------eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG-F------AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP 184 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g-~------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (808)
|.+++.+|+|.|.|.+.+..+ . ....+.|.|...+.. ...+|
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~-------------------------------~~~~p 132 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLD-------------------------------ADVSP 132 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCC-------------------------------SCCSC
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccC-------------------------------CCcCC
Confidence 999999999999999998631 1 112456777542110 00122
Q ss_pred eEEe-ecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCE-EccCCCce-EEEecCc---eEEEEEccCCCCCcEEEE
Q psy2145 185 IFTT-SLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNV-PIKSGSRF-TETNNFG---FVALDIMQCLPEDSGVYT 257 (808)
Q Consensus 185 ~~~~-~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~-~l~~~~~~-~~~~~~~---~~~L~I~~~~~~D~G~Y~ 257 (808)
...+ .+....+.+|+.++|.|.+.+ ..|. +.|.|+++|. .+...... ....++. ...|.|..+.. | |.|+
T Consensus 133 ~~~v~~p~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~ 209 (242)
T 1hxm_B 133 KPTIFLPSIAETKLQKAGTYLCLLEK-FFPDVIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHR 209 (242)
T ss_dssp BCCCCCCCGGGGGSSSCEEEEEEEEE-ESSCCEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEE
T ss_pred CceEECCChhhcccCCCceEEEEEee-EECCCeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEE
Confidence 2211 233445678999999999963 3353 8999999987 56432100 0111221 13688888765 5 9999
Q ss_pred EEEEeCceeEEEEEEEEE
Q psy2145 258 CRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 258 C~a~n~~g~~~~~~~l~V 275 (808)
|.|.|..+.......+.+
T Consensus 210 C~v~n~~~~~~~~~~~~~ 227 (242)
T 1hxm_B 210 CIVRHENNKNGVDQEIIF 227 (242)
T ss_dssp EEEEETTSGGGSCEEEEE
T ss_pred EEEEeCCCCCCceeEeec
Confidence 999998887655555554
No 362
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.70 E-value=2e-16 Score=158.80 Aligned_cols=187 Identities=12% Similarity=0.171 Sum_probs=122.9
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeC--C---EEe---e----------------ccCcEEEEee--
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKN--G---RPV---T----------------IGHRFRPIHD-- 104 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~--g---~~l---~----------------~~~r~~~~~~-- 104 (808)
+..|..+ .+.+|++|+|.|.+.+...+ ...+.|||. + ..+ . ...|+.+..+
T Consensus 4 l~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~ 82 (239)
T 3tv3_H 4 LQESGPT-LVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTP 82 (239)
T ss_dssp EEEESCS-EECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGG
T ss_pred EecCCCE-EEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECC
Confidence 4456677 89999999999999852222 558999983 2 111 1 1257766554
Q ss_pred CCeEEEEEcccCcCCCeeEEEEEEecCc-------------ceEEEEEEEEecCCCccccccccccceeeeeeccccccc
Q psy2145 105 FGYVALDIIDTIPEDSGTYTCRAVNLVG-------------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQ 171 (808)
Q Consensus 105 ~~~~~L~I~~~~~~D~G~Y~C~a~n~~g-------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (808)
.+.++|.|.+++.+|+|.|.|.+.+..+ .......|.|...
T Consensus 83 ~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~-------------------------- 136 (239)
T 3tv3_H 83 KNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSA-------------------------- 136 (239)
T ss_dssp GTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCC--------------------------
T ss_pred CCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccC--------------------------
Confidence 4667899999999999999999987532 0112234555321
Q ss_pred cccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCce----EEEEEcc
Q psy2145 172 RGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGF----VALDIMQ 247 (808)
Q Consensus 172 ~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~----~~L~I~~ 247 (808)
...+|.+...+....+..|+.++|.|.+.+...+...+.|+++|..+...........++. ..|.|..
T Consensus 137 --------~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~ 208 (239)
T 3tv3_H 137 --------STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS 208 (239)
T ss_dssp --------CCBCCEEEEECCCCCC--TTEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEG
T ss_pred --------CCcCCEEEEECCChhhccCCcEEEEEEEeeEeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEch
Confidence 1346777755555566789999999999642222456999999875422111111121221 2688999
Q ss_pred CCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 248 CLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 248 ~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
...+| |.|+|.|.|..+.......|.+
T Consensus 209 ~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 209 SSLGT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp GGTTT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred hhcCC-CEEEEEEEECCCCceEEEEecc
Confidence 98899 9999999998776666655544
No 363
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=136.92 Aligned_cols=96 Identities=31% Similarity=0.518 Sum_probs=87.4
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+..+++..+|.|.++..+|+|.|+|.|
T Consensus 7 ~~P~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 83 (103)
T 3qp3_A 7 HAPRITLRMR-SHRVPCGQNTRFILNV--QSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVC 83 (103)
T ss_dssp EEEEEEECCC-CEEEETTCCEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCEEEeCCc-ceEEeCCCeEEEEEEE--EecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEE
Confidence 4578877765 4678999999999999 799999999999999999999999998888899999999999999999999
Q ss_pred EeCCcceEEEEEEEEEeCC
Q psy2145 714 INRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~~p 732 (808)
.|.+|..+.++.|.|.+.+
T Consensus 84 ~N~~G~~~~~~~l~V~~~~ 102 (103)
T 3qp3_A 84 TNYKGEASDYATLDVTGGD 102 (103)
T ss_dssp EETTEEEEEEEEEEEECC-
T ss_pred EeCCCcEEEEEEEEEECCC
Confidence 9999999999999998763
No 364
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.69 E-value=2.8e-16 Score=157.01 Aligned_cols=187 Identities=13% Similarity=0.198 Sum_probs=118.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeC--CCCCceEEEEeCC-----EEe-----ec-----------cCcEEEEee--CCe
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPV--TDSNLKVEWFKNG-----RPV-----TI-----------GHRFRPIHD--FGY 107 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~--~~p~~~v~W~~~g-----~~l-----~~-----------~~r~~~~~~--~~~ 107 (808)
+..|..+ .+.+|++|+|.|.+.+. +.+...|.|||.. ..+ .. ..|+.+..+ .+.
T Consensus 4 v~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 82 (232)
T 3qhz_H 4 LRESGPA-LVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQ 82 (232)
T ss_dssp EEEECCS-EECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTE
T ss_pred EEcCCCE-EECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCE
Confidence 4456666 89999999999999742 1233455999832 111 01 147776654 367
Q ss_pred EEEEEcccCcCCCeeEEEEEEecCc--------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccc
Q psy2145 108 VALDIIDTIPEDSGTYTCRAVNLVG--------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEET 179 (808)
Q Consensus 108 ~~L~I~~~~~~D~G~Y~C~a~n~~g--------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (808)
++|.|.+++.+|+|.|.|.+.+..+ .......|.|...
T Consensus 83 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~---------------------------------- 128 (232)
T 3qhz_H 83 VVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSA---------------------------------- 128 (232)
T ss_dssp EEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSS----------------------------------
T ss_pred EEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecC----------------------------------
Confidence 8999999999999999999987631 1223345666421
Q ss_pred cCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCce----EEEEEccCCCCCcEE
Q psy2145 180 TTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGF----VALDIMQCLPEDSGV 255 (808)
Q Consensus 180 ~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~ 255 (808)
...+|.+........+..|+.++|.|.+.+...+...+.|+++|..+...........++. ..|.|......| |.
T Consensus 129 ~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ 207 (232)
T 3qhz_H 129 STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QT 207 (232)
T ss_dssp CCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CC
T ss_pred CCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CE
Confidence 1346777655445566789999999999643323567899999875421111111111221 368899998889 99
Q ss_pred EEEEEEeCceeEEEEEEEEE
Q psy2145 256 YTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 256 Y~C~a~n~~g~~~~~~~l~V 275 (808)
|+|.|.|..+.......|.+
T Consensus 208 ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 208 YICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp CEEEEEEGGGTEEEEEECCC
T ss_pred EEEEEEeCCCCccEEEEeCC
Confidence 99999998877666666554
No 365
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.69 E-value=2.1e-16 Score=160.58 Aligned_cols=172 Identities=17% Similarity=0.261 Sum_probs=116.0
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC-----------------CCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE-----------------DSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|+. ..+. ...|+.+..+ .+..+|.|.+++.
T Consensus 17 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 94 (261)
T 2xqy_G 17 LVKPGASVKMSCKA--SGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTS 94 (261)
T ss_dssp EECTTCCEEEEEEE--ESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCCEEEEEEe--CCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCc
Confidence 58899999999999 5666 6789999863 2211 1357766654 3567899999999
Q ss_pred CCCEEEEEEEEeCCeeE---EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccc
Q psy2145 572 EDEGIYICKATNALGEA---VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEI 648 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~---~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v 648 (808)
+|+|.|.|.+.|..+.. ...+.|.|...+. .+|.+...... ..+
T Consensus 95 ~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~v~~~~p~-~~v 141 (261)
T 2xqy_G 95 EDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKT--------------------------------TAPSVYPLAPV-CGD 141 (261)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCC--------------------------------BCCEEEEECCC-CC-
T ss_pred ccCeEEEEEEecCCCcceEECCCEEEEEccCCC--------------------------------CCCeEEEeCCC-ccc
Confidence 99999999999975311 1234666654211 23554433322 246
Q ss_pred cCCceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEEEeC---CEEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 649 MEGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHVQHDF---GYVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 649 ~~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~~~~---~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
.+|+.++|.|.+ .| .|.+ .|.|++||..+.......+...+ ..+.|.|..+..+| |.|+|.|.|........
T Consensus 142 ~~g~~v~L~C~~--~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~~~ 218 (261)
T 2xqy_G 142 TTGSSVTLGCLV--KGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVD 218 (261)
T ss_dssp -CCSEEEEEEEE--EEEBSSCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEE--EeEeCCCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCccEE
Confidence 789999999999 56 4776 99999999875321000011111 13579999988888 99999999987765443
Q ss_pred E
Q psy2145 724 T 724 (808)
Q Consensus 724 ~ 724 (808)
.
T Consensus 219 ~ 219 (261)
T 2xqy_G 219 K 219 (261)
T ss_dssp E
T ss_pred E
Confidence 3
No 366
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.69 E-value=9.8e-17 Score=158.28 Aligned_cols=173 Identities=21% Similarity=0.332 Sum_probs=113.6
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC----------------CCCCeEEEee--CcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE----------------DSSRITTKHD--FGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~----------------~~~~~~~~~~--~~~~~L~I~~v~~~ 572 (808)
.+.+|++|+|.|.+ .+.| .+.|.|+|+. ..+. ...|+.+..+ .+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (215)
T 1c5d_H 11 LVQPSQTLSLTCTV--SGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTE 88 (215)
T ss_dssp EECTTCCEEEEEEE--CSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGG
T ss_pred eecCCCcEEEEEEE--CCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCcc
Confidence 58899999999999 5654 5789999862 2210 1246666543 34678999999999
Q ss_pred CCEEEEEEEEeCCee---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 573 DEGIYICKATNALGE---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 573 D~G~Y~C~a~N~~G~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
|+|.|.|.+.|..|. ....+.|.|...+. .+|.+...... ..+.
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~--------------------------------~~P~i~~~~~~-~~~~ 135 (215)
T 1c5d_H 89 DTAIYFCTREDGWNYFDYWGPGTMVTVSSAQT--------------------------------TAPSVYPLAPG-CGDT 135 (215)
T ss_dssp GCEEEEEEECCSSSCSCCBCCCEEEEECSSCC--------------------------------BCCCEEEECCC-SSCC
T ss_pred cCEEEEEEEecCCcccceEcCCEEEEecCCCC--------------------------------CCCeEEeccCC-hhhc
Confidence 999999999997532 12235677763211 13555443322 2467
Q ss_pred CCceEEEEEEEeeCCC-CCe-EEEEEECCEEccCCCcEEEEEeCCEEEE--EEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 650 EGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKMGSRFHVQHDFGYVTL--DITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 650 ~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~~~~~~~~~~~~~~~L--~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
+|+.++|.|.+ .|. |.| .|.|+++|..+......... +++...+ .+.....+| |.|+|.|.|..|.......
T Consensus 136 ~g~~v~L~C~~--~g~~P~p~~v~W~~~g~~~~~~~~~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~~~ 211 (215)
T 1c5d_H 136 TSSTVTLGCLV--KGYFPEPVTVTWNSGALSSDVHTFPAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVDKK 211 (215)
T ss_dssp CCSSEEEEEEE--EEEBSSCCEEEEGGGTTCCSCCBCCCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cCCcEEEEEEE--eeeEcCCcEEEEccCCccCceEecCccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEEEe
Confidence 89999999999 565 887 99999999765321111111 2232221 122444356 9999999999998765544
Q ss_pred E
Q psy2145 726 L 726 (808)
Q Consensus 726 l 726 (808)
+
T Consensus 212 ~ 212 (215)
T 1c5d_H 212 L 212 (215)
T ss_dssp C
T ss_pred c
Confidence 3
No 367
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.69 E-value=2.9e-16 Score=161.70 Aligned_cols=179 Identities=17% Similarity=0.240 Sum_probs=122.4
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee--------------ccCcEEEEee-CCeEEEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT--------------IGHRFRPIHD-FGYVALD 111 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~--------------~~~r~~~~~~-~~~~~L~ 111 (808)
+...|..+ .+.+|++++|.|.+. +.+.+.|.|||++ .. +. ...|+.+..+ .+..+|.
T Consensus 27 v~~~p~~v-~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 27 VSQHPSWV-ISKSGTSVKIECRSL--DFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp EEEECSEE-EEETTSCEEEEEEES--SSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred EEeCCCeE-EecCCCeEEEEEEeC--CCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 34456677 899999999999997 4678899999953 11 10 1357776653 5677999
Q ss_pred EcccCcCCCeeEEEEEEecCc------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCe
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPI 185 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 185 (808)
|.+++.+|+|.|+|.|.|..+ .....+.|.|..... ...+|.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~P~ 151 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK--------------------------------NVFPPE 151 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG--------------------------------GCBCCE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC--------------------------------CCCCCE
Confidence 999999999999999999432 112235666653210 124676
Q ss_pred EEee-cCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE---E----EecCce----EEEEEccCCCCC
Q psy2145 186 FTTS-LKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT---E----TNNFGF----VALDIMQCLPED 252 (808)
Q Consensus 186 ~~~~-~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~---~----~~~~~~----~~L~I~~~~~~D 252 (808)
+... +....+.+|+.++|.|.+.+ ..|. +.|.|+|||.++..+.... . ...++. ..|.|.....+|
T Consensus 152 v~~~~~~~~~~~~g~~v~L~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d 230 (279)
T 2wbj_D 152 VAVFEPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQN 230 (279)
T ss_dssp EEEEECCHHHHHHHSCCEEEEEEEE-EBSSCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTC
T ss_pred EEEECCCcccccCCCceEEEEEEee-EcCCCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhcc
Confidence 6554 44455678999999999953 2343 7999999999986543211 0 012222 248888887765
Q ss_pred -cEEEEEEEEeCcee
Q psy2145 253 -SGVYTCRAVNALGQ 266 (808)
Q Consensus 253 -~G~Y~C~a~n~~g~ 266 (808)
.|.|+|+|.|....
T Consensus 231 ~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 231 PRNHFRCQVQFYGLS 245 (279)
T ss_dssp TTCEEEEEEEECCBC
T ss_pred CCCEEEEEEEeCCCC
Confidence 77899999996543
No 368
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.69 E-value=2.2e-16 Score=159.97 Aligned_cols=174 Identities=16% Similarity=0.268 Sum_probs=119.5
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--E---ec--------------CCCCCeEEEee--CcEEEEEECCCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--K---PL--------------EDSSRITTKHD--FGYVAMDLSHVRAED 573 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~---~l--------------~~~~~~~~~~~--~~~~~L~I~~v~~~D 573 (808)
.+.+|++|+|.|.+.+...+...+.|||.. . .+ ....|+.+..+ .+.++|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (253)
T 3liz_H 11 LVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSED 90 (253)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGG
T ss_pred EECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhh
Confidence 588999999999994212346779999842 1 11 11256666644 356789999999999
Q ss_pred CEEEEEEEEeC----CeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcccc
Q psy2145 574 EGIYICKATNA----LGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIM 649 (808)
Q Consensus 574 ~G~Y~C~a~N~----~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~ 649 (808)
+|.|.|.+.|. .+.......|.|..... .+|.+...... ..+.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~i~~~~~~-~~~~ 137 (253)
T 3liz_H 91 TAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKT--------------------------------TPPSVYPLAPG-SAAQ 137 (253)
T ss_dssp CEEEEEEECCBTTTBCCEECCCEEEEECSSCC--------------------------------BCCEEEEECC------
T ss_pred CEEEEEEEecCCcceeeEECCCEEEEEeccCC--------------------------------CCCeEEEecCC-cccC
Confidence 99999999986 23333335666652111 23555533332 3466
Q ss_pred CCceEEEEEEEeeCC-CCCe-EEEEEECCEEcc--------CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 650 EGQSAHYDCRVVPVG-DPTM-RFEWFVNGVELK--------MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 650 ~G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~--------~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+|+.++|.|.+ .| .|.+ .|.|++||..+. .++.|.+. +.|.|..+..+| |.|+|.|.|..|.
T Consensus 138 ~g~~v~L~C~~--~g~~P~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~-----s~L~i~~~~~~d-g~ytC~v~~~~~~ 209 (253)
T 3liz_H 138 TNSMVTLGCLV--KGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLS-----SSVTVPSSTWPS-ETVTCNVAHPASS 209 (253)
T ss_dssp -CCEEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEEETTEEEEE-----EEEEEETTSTTT-SCCEEEEEEGGGT
T ss_pred CCCcEEEEEEE--eeEeCCCeEEEEEeCCeecceEeCCccccCCeEEEE-----EEEEEcHHHCCC-ceEEEEEEECCCC
Confidence 79999999999 56 6766 999999997431 11233322 479999999999 9999999999999
Q ss_pred eEEEEEEEEE
Q psy2145 720 AVSSTSLKVK 729 (808)
Q Consensus 720 ~~~s~~l~V~ 729 (808)
......|.+.
T Consensus 210 ~~~~~~~~~~ 219 (253)
T 3liz_H 210 TKVDKKIVPR 219 (253)
T ss_dssp EEEEEECCCC
T ss_pred cceEEEecCc
Confidence 8888888766
No 369
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.68 E-value=4.5e-16 Score=156.20 Aligned_cols=169 Identities=17% Similarity=0.298 Sum_probs=113.5
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--Eec---------------CCCCCeEEEee-CcEEEEEECCCCCCCCEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPL---------------EDSSRITTKHD-FGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l---------------~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~ 576 (808)
.+.+|++|+|.|.+ . .+.+.|.|+|++ ..+ ....|+.+..+ .+..+|.|.+++.+|+|.
T Consensus 10 ~v~~G~~v~L~C~~--~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 86 (238)
T 1bec_A 10 VAVTGGKVTLSCQQ--T-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSV 86 (238)
T ss_dssp EEETTCCEEEEEEE--S-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEE
T ss_pred EEeCCCcEEEEEEe--C-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEE
Confidence 58899999999998 3 467899999863 111 11356665542 456789999999999999
Q ss_pred EEEEEEeCCe---e--EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 577 YICKATNALG---E--AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 577 Y~C~a~N~~G---~--~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
|.|.+.|..+ . ......|.|..... ...+|.+.........+.+|
T Consensus 87 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P~v~~~~~~~~~~~~g 136 (238)
T 1bec_A 87 YFCASGGGRGSYAEQFFGPGTRLTVLEDLR------------------------------QVTPPKVSLFEPSKAEIANK 136 (238)
T ss_dssp EEEEEESCTTCGGGCEECCCEEEEEESCGG------------------------------GCBCCEEEEECCCSTTCSSS
T ss_pred EEEEEecCCCCccccccCCCEEEEEeccCC------------------------------CCCCCceEEECCChHHcccC
Confidence 9999999742 1 11234577764211 01246665544444457789
Q ss_pred ceEEEEEEEeeCCC-CC-eEEEEEECCEEccCCCcEE---EEEeCCE----EEEEEccCCCCC-cEEEEEEEEeCCc
Q psy2145 652 QSAHYDCRVVPVGD-PT-MRFEWFVNGVELKMGSRFH---VQHDFGY----VTLDITKCVPAD-SGVYMCKAINRAG 718 (808)
Q Consensus 652 ~~v~l~C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~---~~~~~~~----~~L~I~~v~~~D-~G~Y~C~A~N~~G 718 (808)
+.++|.|.+ .|. |. +.|.|+|||..+..+.+.. +...++. +.|.|......| .|.|+|.|.|...
T Consensus 137 ~~~~L~C~~--~g~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 137 QKATLVCLA--RGFFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp CSCSEEEEE--EEEBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred CceEEEEEE--eeEeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 999999999 564 65 4999999999987654321 2233332 235555444444 6789999999843
No 370
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.68 E-value=1.5e-16 Score=156.02 Aligned_cols=176 Identities=15% Similarity=0.205 Sum_probs=107.7
Q ss_pred CCCCccc-cCCCCcEEEEEEEeeCCC--CCceEEEEeCCEEeeccCc-EEEEeeCCe----EEEEEcccCcCCCeeEEEE
Q psy2145 55 KPKSIEN-LRERGHAHFECKLEPVTD--SNLKVEWFKNGRPVTIGHR-FRPIHDFGY----VALDIIDTIPEDSGTYTCR 126 (808)
Q Consensus 55 ~p~~~~~-v~~G~~v~l~C~~~~~~~--p~~~v~W~~~g~~l~~~~r-~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~ 126 (808)
.|.+... +.+|++++|.|.+.+... |.+.|.|||+|.++..+.. ......++. ..|.|.....+|+|.|+|.
T Consensus 7 ~pps~~~~~~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~ 86 (207)
T 1l6x_A 7 FPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCK 86 (207)
T ss_dssp ECCCHHHHHCTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred eCcChHHheecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEE
Confidence 3444413 389999999999996321 3469999999988764321 111122222 1344445555569999999
Q ss_pred EEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEE
Q psy2145 127 AVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECR 206 (808)
Q Consensus 127 a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~ 206 (808)
|.|..+.......+.+.. ....+|.+...+.......|..++|.|.
T Consensus 87 a~n~~~~~~~~~~v~~~~----------------------------------~~~~~P~v~~~~~~~~~~~~~~~~L~C~ 132 (207)
T 1l6x_A 87 VSNKALPAPIEKTISKAK----------------------------------GQPREPQVYTLPPSRDELTKNQVSLTCL 132 (207)
T ss_dssp EECTTSSSCEEEEECCCC----------------------------------SCCBCCEEEEECCCGGGGGSSEEEEEEE
T ss_pred EEcCcCCcceEEEeccCC----------------------------------CCCcCCEEEEECCChHHhcCCcEEEEEE
Confidence 999877653333332100 1145677665554433335667999999
Q ss_pred EeecCCCC-eEEEEeeCCEEccCCCceE-EEecCce----EEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 207 LIPVSDNT-MKVEWFHNNVPIKSGSRFT-ETNNFGF----VALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 207 ~~~~~~p~-~~v~W~~~g~~l~~~~~~~-~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
+.+ ..|. +.|.|+|||.++....... ....+|. ..|.|.....+|.|.|+|.|.|...
T Consensus 133 ~~g-~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 133 VKG-FYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEE-EBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EeC-eECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 964 2343 5999999999886422111 1122332 1355666656789999999999643
No 371
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.68 E-value=2.2e-16 Score=157.60 Aligned_cols=202 Identities=13% Similarity=0.144 Sum_probs=114.1
Q ss_pred cceeeeccCCCchhhhhhhccCCccceeecCCCCccc-cCCCCcEEEEEEEeeCC-CC-CceEEEEeCCEEeeccCcEE-
Q psy2145 25 YHWQNVPVPEWSKEQENAKKKKNFIYYTVTKPKSIEN-LRERGHAHFECKLEPVT-DS-NLKVEWFKNGRPVTIGHRFR- 100 (808)
Q Consensus 25 g~y~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-v~~G~~v~l~C~~~~~~-~p-~~~v~W~~~g~~l~~~~r~~- 100 (808)
|.|.|...+.... -.. ......+..++..|... . +..|+.++|.|.+.++. .| ...|.|+|||..+.......
T Consensus 1 ~~~~~~~~~~~~~-c~~-~~~~~~P~v~i~~ps~~-~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~ 77 (240)
T 4acp_A 1 GTKSCDKTHTCPP-CPA-PELLGGPSVFLFPPKPK-DTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR 77 (240)
T ss_dssp ------------------------CEEEEECCCHH-HHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCC
T ss_pred CceeeeeeecCCC-CCc-cccCCCCEEEEECcChH-HhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccc
Confidence 7888888776543 111 10111234455666665 5 77899999999999742 14 45899999999985432111
Q ss_pred -EEeeCC---eEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeecccccccccccc
Q psy2145 101 -PIHDFG---YVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYI 176 (808)
Q Consensus 101 -~~~~~~---~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (808)
...++. ...|.|.....+|.|.|+|+|.|..+.......+....
T Consensus 78 ~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~-------------------------------- 125 (240)
T 4acp_A 78 EEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK-------------------------------- 125 (240)
T ss_dssp EEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC--------------------------------
T ss_pred eECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC--------------------------------
Confidence 111221 13689988888899999999999876433332322100
Q ss_pred ccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCc--eEEEecCce---EEEEEccCCC
Q psy2145 177 EETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSR--FTETNNFGF---VALDIMQCLP 250 (808)
Q Consensus 177 ~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~--~~~~~~~~~---~~L~I~~~~~ 250 (808)
....+|.+.+.+......+|+.++|.|.+.+. .|. ..|.|+|||..+..... .....++.+ ..|.|.....
T Consensus 126 --~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf-~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~ 202 (240)
T 4acp_A 126 --GQPREPQVYTLPPSRDELTKNQVSLTCLVKGF-YPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRW 202 (240)
T ss_dssp --SCCBCCEEEEECCCGGGGGSSEEEEEEEEEEE-BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHH
T ss_pred --CCCCCCEEEEECCChHHhcCCceEEEEEEeEE-eCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHh
Confidence 11457777776665544469999999999642 444 58999999998753211 111222222 2466666666
Q ss_pred CCcEEEEEEEEeCc
Q psy2145 251 EDSGVYTCRAVNAL 264 (808)
Q Consensus 251 ~D~G~Y~C~a~n~~ 264 (808)
.|.|.|+|+|.|..
T Consensus 203 ~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 203 QQGNVFSCSVMHEA 216 (240)
T ss_dssp HTTCCEEEEEECTT
T ss_pred CCCCEEEEEEEECC
Confidence 78999999999854
No 372
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.67 E-value=6.6e-17 Score=158.48 Aligned_cols=177 Identities=18% Similarity=0.264 Sum_probs=106.2
Q ss_pred eeeecCCCccc-ccCCCceEEEEEEeeCCCC----CcEEEEEECCEecCCCCC-eEEEeeCcE----EEEEECCCCCCCC
Q psy2145 505 VFTKPLQNIDA-VEEGKNAHFSCRLIPVGDP----TLKVEWFRNEKPLEDSSR-ITTKHDFGY----VAMDLSHVRAEDE 574 (808)
Q Consensus 505 ~f~~~~~~~~~-v~~G~~v~l~C~v~~~g~P----~~~v~W~k~g~~l~~~~~-~~~~~~~~~----~~L~I~~v~~~D~ 574 (808)
+++.++... . +.+|+.+.|.|.+ .|.| .+.|+|+|+|.++..... ......++. ..|.|.....+|+
T Consensus 4 v~~~pps~~-~~~~~G~~v~L~C~~--~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~ 80 (207)
T 1l6x_A 4 VFLFPPKPK-DTLMISRTPEVTCVV--VDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 80 (207)
T ss_dssp EEEECCCHH-HHHCTTSCCEEEEEE--EEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTT
T ss_pred EEEeCcChH-HheecCCceEEEEEE--ecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCC
Confidence 444444332 3 3799999999999 4554 459999999988764311 111122232 1244444444459
Q ss_pred EEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceE
Q psy2145 575 GIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSA 654 (808)
Q Consensus 575 G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v 654 (808)
|.|+|.|.|..|....+..+.+.. ....+|.+.........+ +|..+
T Consensus 81 g~Y~C~a~n~~~~~~~~~~v~~~~--------------------------------~~~~~P~v~~~~~~~~~~-~~~~~ 127 (207)
T 1l6x_A 81 KEYKCKVSNKALPAPIEKTISKAK--------------------------------GQPREPQVYTLPPSRDEL-TKNQV 127 (207)
T ss_dssp CCEEEEEECTTSSSCEEEEECCCC--------------------------------SCCBCCEEEEECCCGGGG-GSSEE
T ss_pred ceEEEEEEcCcCCcceEEEeccCC--------------------------------CCCcCCEEEEECCChHHh-cCCcE
Confidence 999999999988653333332100 011246555444332233 46669
Q ss_pred EEEEEEeeCC-CCC-eEEEEEECCEEccCCCcEEE--EEeCCE---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 655 HYDCRVVPVG-DPT-MRFEWFVNGVELKMGSRFHV--QHDFGY---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 655 ~l~C~v~~~g-~P~-p~i~W~~~g~~l~~~~~~~~--~~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+|.|.+ .| .|. +.|.|+|||.++........ ..++.+ +.|.|.....+|.|.|+|.|.|....
T Consensus 128 ~L~C~~--~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l~ 197 (207)
T 1l6x_A 128 SLTCLV--KGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALH 197 (207)
T ss_dssp EEEEEE--EEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEEEEE--eCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCcC
Confidence 999999 57 454 49999999998864322111 112222 24556655556899999999998653
No 373
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=3e-16 Score=137.34 Aligned_cols=100 Identities=18% Similarity=0.265 Sum_probs=88.9
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+....+..+|.|.++..+|+|.|+|.|
T Consensus 6 ~pp~i~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPE-DQKVRAGESVELFGKV--TGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCC-SEEEETTCCEEEEEEE--ESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCC-CeEEeCCCeEEEEEEE--EcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 3577766544 4679999999999999 799999999999999999888999988777889999999999999999999
Q ss_pred EeCCcceEEEEEEEEEeCCCccc
Q psy2145 714 INRAGEAVSSTSLKVKSKSDIVS 736 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~~p~~~~ 736 (808)
.|..|..+.++.|.|..+|..+.
T Consensus 83 ~N~~g~~~~~~~l~V~~~p~~P~ 105 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVVDKPDPPA 105 (114)
T ss_dssp ECSSCEEECCEEEEEECSCSCCC
T ss_pred EECCCcEEEEEEEEEECCCCCCC
Confidence 99999999999999998876543
No 374
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.67 E-value=1.3e-16 Score=161.30 Aligned_cols=167 Identities=19% Similarity=0.333 Sum_probs=101.3
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--EecC-----------------CCCCeEEEee--CcEEEEEECCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KPLE-----------------DSSRITTKHD--FGYVAMDLSHVRA 571 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~l~-----------------~~~~~~~~~~--~~~~~L~I~~v~~ 571 (808)
.+.+|++|+|.|.+ .+.| .+.+.|||.. ..+. ...|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 88 (257)
T 3bn9_D 11 LVKPGGSLRLSCAA--SGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRA 88 (257)
T ss_dssp EECTTCEEEEEEEE--ESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCG
T ss_pred EEcCCCcEEEEEEe--ccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCCh
Confidence 58899999999999 5665 6789999853 2110 1357776654 4567899999999
Q ss_pred CCCEEEEEEEEeCCe----------e---EEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeE
Q psy2145 572 EDEGIYICKATNALG----------E---AVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIF 638 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G----------~---~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~ 638 (808)
+|+|.|.|.+.|..| . ......|.|...+. .+|.+
T Consensus 89 ~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~--------------------------------~~P~v 136 (257)
T 3bn9_D 89 EDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAST--------------------------------KGPSV 136 (257)
T ss_dssp GGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCC--------------------------------BCCEE
T ss_pred hhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCC--------------------------------cCCcE
Confidence 999999999999865 1 11234666654211 12443
Q ss_pred EeecCCCccccCCceEEEEEEEeeCCC-CCe-EEEEEECCEEccC---------CCcEEEEEeCCEEEEEEccCCCCCcE
Q psy2145 639 TQLLTGTSEIMEGQSAHYDCRVVPVGD-PTM-RFEWFVNGVELKM---------GSRFHVQHDFGYVTLDITKCVPADSG 707 (808)
Q Consensus 639 ~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~p-~i~W~~~g~~l~~---------~~~~~~~~~~~~~~L~I~~v~~~D~G 707 (808)
....+. ..+.+|+.++|.|.+ .|. |.| .|.|++||..+.. ++.|.+ .+.|.|..+..+| |
T Consensus 137 ~~~~p~-~~~~~g~~v~L~C~~--~g~~P~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~-----~s~L~I~~~~~~~-g 207 (257)
T 3bn9_D 137 FPLAPS-SKSTSGGTAALGCLV--KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-Q 207 (257)
T ss_dssp CCCCC------------CCCEE--EEEBSSCCEEEETTTTCCSSCEECCCEECTTSCEEE-----EEECCCC--------
T ss_pred EEecCc-ccccCCCcEEEEEEE--eeEECCCcEEEEeeCCCcCCcEecCCeEcCCCCEEE-----EEEEEEcccccCC-C
Confidence 322211 235689999999999 564 877 9999999986431 112222 2468898888778 9
Q ss_pred EEEEEEEeCCcceEEEE
Q psy2145 708 VYMCKAINRAGEAVSST 724 (808)
Q Consensus 708 ~Y~C~A~N~~G~~~~s~ 724 (808)
.|+|.|.|..+......
T Consensus 208 ~YtC~v~n~~~~~~~~~ 224 (257)
T 3bn9_D 208 TYICNVNHKPSNTKVDK 224 (257)
T ss_dssp CEEEEEEEGGGTEEEEE
T ss_pred eEEEEEEecCCCcCEEE
Confidence 99999999876544333
No 375
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.67 E-value=6.3e-17 Score=162.06 Aligned_cols=180 Identities=17% Similarity=0.256 Sum_probs=113.3
Q ss_pred CCCeeeecCCCccc-ccCCCceEEEEEEeeCCC---CCc-EEEEEECCEecCCCCC-eEEEeeC----cEEEEEECCCCC
Q psy2145 502 QRPVFTKPLQNIDA-VEEGKNAHFSCRLIPVGD---PTL-KVEWFRNEKPLEDSSR-ITTKHDF----GYVAMDLSHVRA 571 (808)
Q Consensus 502 ~~P~f~~~~~~~~~-v~~G~~v~l~C~v~~~g~---P~~-~v~W~k~g~~l~~~~~-~~~~~~~----~~~~L~I~~v~~ 571 (808)
.|.+|+.++... . +.+|+.++|.|.+ .|. |.+ .|+|+|++..+..... ......+ +...|.|.++..
T Consensus 15 ~P~v~~~pp~~~-~~v~~G~~v~L~C~~--~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~ 91 (239)
T 1i1c_A 15 VSSVFIFPPKTK-DVLGGGLTPKVTCVV--VDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDW 91 (239)
T ss_dssp --CEEEECCCHH-HHTTSSSCCEEEEEE--EEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHH
T ss_pred CCEEEEECCChH-HhcccCCcEEEEEEE--ecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHc
Confidence 344555544432 4 7899999999999 454 765 8999999876643210 0001111 224799999999
Q ss_pred CCCEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCC
Q psy2145 572 EDEGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEG 651 (808)
Q Consensus 572 ~D~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G 651 (808)
+|+|.|+|.|.|..|.......+.. .. ....+|.+....... ....|
T Consensus 92 ~D~g~Y~C~~~~~~~~~~~~~~v~~--~~------------------------------~~~~~P~v~v~~~~~-~~~~g 138 (239)
T 1i1c_A 92 LNGKTFKCKVNSGAFPAPIEKSISK--PE------------------------------GTPRGPQVYTMAPPK-EEMTQ 138 (239)
T ss_dssp HTTCCEEEEEECSSSSSCEEEEECC--CS------------------------------SCCBCCEEEEECCCG-GGGGS
T ss_pred cCCCeEEEEEecccCCCCcEEEEec--CC------------------------------CCCcCCEEEEECCCh-HHhcC
Confidence 9999999999999886432222211 00 011346665544432 23458
Q ss_pred ceEEEEEEEeeCC-CCC-eEEEEEECCEEccCCCcEE--EEEeCCE---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 652 QSAHYDCRVVPVG-DPT-MRFEWFVNGVELKMGSRFH--VQHDFGY---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 652 ~~v~l~C~v~~~g-~P~-p~i~W~~~g~~l~~~~~~~--~~~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
+.++|.|.+ .| .|. +.|.|+|||+.+....... ...++.+ +.|.|.....+|.|.|+|.|.|....
T Consensus 139 ~~~~L~C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 139 SQVSITCMV--KGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp SEEEEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTSG
T ss_pred CcEEEEEEE--eeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCCC
Confidence 899999999 56 454 5899999999986432211 1122222 23555554445799999999999754
No 376
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.67 E-value=8e-16 Score=155.01 Aligned_cols=186 Identities=13% Similarity=0.140 Sum_probs=120.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CE---Eee--------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GR---PVT--------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~---~l~--------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+...+.|||. +. .+. ...|+.+..+ .+.++|.
T Consensus 3 l~~~~~v-~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 81 (248)
T 3u2s_H 3 LVESGGG-VVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQ 81 (248)
T ss_dssp EEEECCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred eecCCCE-EEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEE
Confidence 4556777 89999999999999842234568999983 21 110 1257776554 4677899
Q ss_pred EcccCcCCCeeEEEEEEecCc----------------------ceEEEEEEEEecCCCccccccccccceeeeeeccccc
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG----------------------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSK 169 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g----------------------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (808)
|.+++.+|+|.|.|.+.+..+ .....+.|.|...
T Consensus 82 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~------------------------ 137 (248)
T 3u2s_H 82 MNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSA------------------------ 137 (248)
T ss_dssp ECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSC------------------------
T ss_pred ECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEccc------------------------
Confidence 999999999999999987421 1112345555421
Q ss_pred cccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEeeCCEEccCCCceEEEecCc----eEEEE
Q psy2145 170 YQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFHNNVPIKSGSRFTETNNFG----FVALD 244 (808)
Q Consensus 170 ~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~~~~~~~~----~~~L~ 244 (808)
...+|.+...+....+..|+.++|.|.+.+. .| .+.+.|+++|..+...........++ ...|.
T Consensus 138 ----------~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~-~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~ 206 (248)
T 3u2s_H 138 ----------STKGPSVFPLAPSSKSTSGGTAALGCLVKDY-FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVT 206 (248)
T ss_dssp ----------CCBCCEEEEECCC------CEEEEEEEEEEE-BSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEE
T ss_pred ----------CCCCCEEEEeCCCccccCCCcEEEEEEEeeE-ECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEE
Confidence 1346777655555556679999999999753 34 67899999987542111101111122 12688
Q ss_pred EccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 245 IMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 245 I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
|......| |.|+|.|.|..+.......|.+
T Consensus 207 i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~ 236 (248)
T 3u2s_H 207 VPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 236 (248)
T ss_dssp EEGGGBTT-BCCEEEEEEGGGTEEEEEECCC
T ss_pred EChhhcCC-CeEEEEEEECCCCcceEEEEcc
Confidence 88888888 9999999998776665555544
No 377
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.66 E-value=5.3e-16 Score=131.88 Aligned_cols=95 Identities=34% Similarity=0.486 Sum_probs=83.4
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEE-EeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQ-HDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+. ..++..+|.|.++..+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~-~~v~~G~~v~l~C~~--~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 4 EAPKIFERIQS-QTVGQGSDAHFRVRV--VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCceEecCcc-eEEcCCCcEEEEEEE--EEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence 35777776554 678999999999999 69999999999999999988777654 357788999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeC
Q psy2145 713 AINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~ 731 (808)
|.|.+|....++.|.|.++
T Consensus 81 a~N~~g~~~~~~~l~V~~~ 99 (99)
T 1g1c_A 81 AINIAGETSSHAFLLVQAK 99 (99)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEECCCcEEEEEEEEEecC
Confidence 9999999999999999864
No 378
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.66 E-value=1.9e-16 Score=158.48 Aligned_cols=176 Identities=14% Similarity=0.184 Sum_probs=114.3
Q ss_pred CCCCccc-cCCCCcEEEEEEEeeCC-CCCc-eEEEEeCCEEeeccCcE-EEEeeC----CeEEEEEcccCcCCCeeEEEE
Q psy2145 55 KPKSIEN-LRERGHAHFECKLEPVT-DSNL-KVEWFKNGRPVTIGHRF-RPIHDF----GYVALDIIDTIPEDSGTYTCR 126 (808)
Q Consensus 55 ~p~~~~~-v~~G~~v~l~C~~~~~~-~p~~-~v~W~~~g~~l~~~~r~-~~~~~~----~~~~L~I~~~~~~D~G~Y~C~ 126 (808)
.|..... +.+|++++|.|.+.+.. .|.+ .|.|||++..+...... .....+ +..+|.|.+++.+|+|.|+|.
T Consensus 21 ~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~ 100 (239)
T 1i1c_A 21 FPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCK 100 (239)
T ss_dssp ECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEE
T ss_pred ECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEE
Confidence 3555524 88999999999998632 1554 89999998776532110 001111 234799999999999999999
Q ss_pred EEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEE
Q psy2145 127 AVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECR 206 (808)
Q Consensus 127 a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~ 206 (808)
|.|..+.......+... . ....+|.+...+.......|+.++|.|.
T Consensus 101 ~~~~~~~~~~~~~v~~~--~--------------------------------~~~~~P~v~v~~~~~~~~~g~~~~L~C~ 146 (239)
T 1i1c_A 101 VNSGAFPAPIEKSISKP--E--------------------------------GTPRGPQVYTMAPPKEEMTQSQVSITCM 146 (239)
T ss_dssp EECSSSSSCEEEEECCC--S--------------------------------SCCBCCEEEEECCCGGGGGSSEEEEEEE
T ss_pred EecccCCCCcEEEEecC--C--------------------------------CCCcCCEEEEECCChHHhcCCcEEEEEE
Confidence 99988764332222110 0 1145777776665544456899999999
Q ss_pred EeecCCCC-eEEEEeeCCEEccCCCceE-EEecCceE----EEEEccCCCCCcEEEEEEEEeCce
Q psy2145 207 LIPVSDNT-MKVEWFHNNVPIKSGSRFT-ETNNFGFV----ALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 207 ~~~~~~p~-~~v~W~~~g~~l~~~~~~~-~~~~~~~~----~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
+.+. .|. ..|.|+|||..+....... ....+|.. .|.|.....+|.|.|+|.|.|...
T Consensus 147 ~~g~-~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 147 VKGF-YPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EEEE-BSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred Eeee-ECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 9642 443 6899999999985432111 11233322 355555555679999999999653
No 379
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.66 E-value=1.5e-15 Score=152.27 Aligned_cols=175 Identities=13% Similarity=0.207 Sum_probs=116.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--EE---ee------------ccCcEEEEee-CCeEEEEEcc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--RP---VT------------IGHRFRPIHD-FGYVALDIID 114 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~~---l~------------~~~r~~~~~~-~~~~~L~I~~ 114 (808)
+..|..+ .+.+|++|+|.|.+. .+.+.|.|||++ .. +. ...|+.+..+ .+..+|.|.+
T Consensus 3 ~q~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~ 78 (238)
T 1bec_A 3 TQSPRNK-VAVTGGKVTLSCQQT---NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILEL 78 (238)
T ss_dssp EEECSEE-EEETTCCEEEEEEES---SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESS
T ss_pred ccCCCee-EEeCCCcEEEEEEeC---CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEec
Confidence 3456677 899999999999985 356799999953 11 11 1356666543 4667999999
Q ss_pred cCcCCCeeEEEEEEecCc---c--eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 115 TIPEDSGTYTCRAVNLVG---F--AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 115 ~~~~D~G~Y~C~a~n~~g---~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
++.+|+|.|.|.+.|..+ . ....+.|.|..... ...+|.+...
T Consensus 79 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~~~P~v~~~ 126 (238)
T 1bec_A 79 ATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR--------------------------------QVTPPKVSLF 126 (238)
T ss_dssp CCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGG--------------------------------GCBCCEEEEE
T ss_pred CCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCC--------------------------------CCCCCceEEE
Confidence 999999999999998642 1 12234577753210 0246666553
Q ss_pred -cCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE---EEecCceE----EEEEccCCCCC-cEEEEEE
Q psy2145 190 -LKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT---ETNNFGFV----ALDIMQCLPED-SGVYTCR 259 (808)
Q Consensus 190 -~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~---~~~~~~~~----~L~I~~~~~~D-~G~Y~C~ 259 (808)
+....+.+|+.++|.|.+.+ ..|. +.|.|+|||..+..+.... ....++.+ .|.|......| .|.|+|.
T Consensus 127 ~~~~~~~~~g~~~~L~C~~~g-~~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~ 205 (238)
T 1bec_A 127 EPSKAEIANKQKATLVCLARG-FFPDHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQ 205 (238)
T ss_dssp CCCSTTCSSSCSCSEEEEEEE-EBSCCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEE
T ss_pred CCChHHcccCCceEEEEEEee-EeCCCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEE
Confidence 44556778999999999953 2354 5999999999987653221 21223322 34555544444 6799999
Q ss_pred EEeCc
Q psy2145 260 AVNAL 264 (808)
Q Consensus 260 a~n~~ 264 (808)
|.|..
T Consensus 206 v~~~~ 210 (238)
T 1bec_A 206 VQFHG 210 (238)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 99963
No 380
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=6.4e-16 Score=136.12 Aligned_cols=99 Identities=20% Similarity=0.212 Sum_probs=85.8
Q ss_pred ccCCCeEEee--cCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEE
Q psy2145 632 QYEKPIFTQL--LTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVY 709 (808)
Q Consensus 632 ~~~~P~~~~~--~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 709 (808)
...+|.|... ......+.+|+.+.|.|.+ .|.|.|.|.|+|||..+. +.++.+....+..+|.|.++..+|+|.|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~--~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPF--QGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEE--EEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEE--ccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEE
Confidence 3456777543 3445678999999999999 799999999999999997 5677787777888999999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEEeCCC
Q psy2145 710 MCKAINRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 710 ~C~A~N~~G~~~~s~~l~V~~~p~ 733 (808)
+|.|.|..|..+.++.|.|..+|+
T Consensus 95 ~C~a~N~~G~~~~~~~l~V~~~P~ 118 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRVVEKAG 118 (118)
T ss_dssp EEEEECSSCEECCEEEEEEECCCC
T ss_pred EEEEEeCCCeEEEEEEEEEEcCCC
Confidence 999999999999999999998873
No 381
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.65 E-value=3.5e-15 Score=148.80 Aligned_cols=185 Identities=14% Similarity=0.210 Sum_probs=124.2
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CE---Eee--------------ccCcEEEEeeC--CeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GR---PVT--------------IGHRFRPIHDF--GYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~---~l~--------------~~~r~~~~~~~--~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+...+.|||. +. .+. ...|+.+..+. +.++|.
T Consensus 4 v~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (230)
T 3n9g_H 4 LVQSGAE-VRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYME 82 (230)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EEecCCE-EEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEE
Confidence 4456666 89999999999999742234568999983 11 110 12577766553 567899
Q ss_pred EcccCcCCCeeEEEEEEecCc-----ce---EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCC
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG-----FA---EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQA 183 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g-----~~---~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (808)
|.+++.+|+|.|.|.+.+..+ .. ...+.|.|.... ..+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~----------------------------------~~~ 128 (230)
T 3n9g_H 83 LSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS----------------------------------TKG 128 (230)
T ss_dssp ECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC----------------------------------CBC
T ss_pred ECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC----------------------------------CCC
Confidence 999999999999999987531 11 123456664211 346
Q ss_pred CeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEeeCCEEccCCCce--EEEecCc----eEEEEEccCCCCCcEEE
Q psy2145 184 PIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFHNNVPIKSGSRF--TETNNFG----FVALDIMQCLPEDSGVY 256 (808)
Q Consensus 184 P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~I~~~~~~D~G~Y 256 (808)
|.+........+.+|+.++|.|.+.+. .| .+.+.| +|..+..+... .....++ ...|.|.....+| |.|
T Consensus 129 P~v~~~~~~~~~~~g~~v~L~C~~~~~-~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y 204 (230)
T 3n9g_H 129 PSVFPLAPSSKSTSGGTAALGCLVKDY-FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 204 (230)
T ss_dssp CEEEEECCCCCCCTTCEEEEEEEEEEE-BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCC
T ss_pred CEEEecCCCccccCCCCEEEEEEEEeE-ECCCEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeE
Confidence 666655555556799999999999643 34 578999 66555321110 0111222 1368999999999 999
Q ss_pred EEEEEeCceeEEEEEEEEEe
Q psy2145 257 TCRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 257 ~C~a~n~~g~~~~~~~l~V~ 276 (808)
+|.|.|..+.......|.|.
T Consensus 205 tC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 205 ICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp EEEEEEGGGTEEEEEECCCC
T ss_pred EEEEEECCCCcceEEEccCC
Confidence 99999988776666666654
No 382
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.65 E-value=2.4e-16 Score=180.82 Aligned_cols=164 Identities=22% Similarity=0.347 Sum_probs=119.4
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC------------CCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED------------SSRITTKHDFGYVAMDLSHVRAEDEGIYICKAT 582 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~------------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 582 (808)
.+.+|++++|.|.+. .+.|.+.|+|+|++..+.. ..+..+..+ + +|.|.+++.+|+|.|+|.|.
T Consensus 377 ~~~~G~~v~L~C~~~-~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~--~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 377 TARIGEPLVLKCKGA-PKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPN-G--SLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEETTSCEEECCTTC-CSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTT-S--CEEESSCCGGGCEEEEEEEE
T ss_pred ceecCCcEEEeeeec-CCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCC-c--eEEEeccccccCeEEEEEEE
Confidence 578999999999863 4788999999998763311 224443332 2 69999999999999999999
Q ss_pred eCCeeE-EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce-EEEEEEE
Q psy2145 583 NALGEA-VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS-AHYDCRV 660 (808)
Q Consensus 583 N~~G~~-~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~-v~l~C~v 660 (808)
|..|.. ...+.|.|...+. +|.+.... ..+.+|+. +.|.|.+
T Consensus 453 n~~~~~~~~~~~l~V~~~~~---------------------------------~p~i~~~~---~~~~~~~~~~~l~C~~ 496 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIPG---------------------------------KPEIVDSA---SELTAGVPNKVGTCVS 496 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCCC---------------------------------CCEEESCC---SEECTTSCEEEEEEEE
T ss_pred cCCCceeEEEEEEEEEcCCC---------------------------------CCEEEcCC---cccccCCceeEEEEEC
Confidence 999987 7778898876443 24333221 22445554 5679999
Q ss_pred eeCC-CCCeEEEEEECCEEccCC-CcEEEEE------eCC----EEEEEEccCCC-CCcEEEEEEEEeCCcce
Q psy2145 661 VPVG-DPTMRFEWFVNGVELKMG-SRFHVQH------DFG----YVTLDITKCVP-ADSGVYMCKAINRAGEA 720 (808)
Q Consensus 661 ~~~g-~P~p~i~W~~~g~~l~~~-~~~~~~~------~~~----~~~L~I~~v~~-~D~G~Y~C~A~N~~G~~ 720 (808)
.| .|.|.|+|++||++|... .++.+.. +.| .++|.|..+.. ++.|.|+|.|+|.++..
T Consensus 497 --~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~~ 567 (581)
T 3o3u_N 497 --EGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPRH 567 (581)
T ss_dssp --EEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCSS
T ss_pred --CCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCCC
Confidence 56 699999999999999753 3333321 112 35799999984 55889999999997543
No 383
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.65 E-value=8.5e-16 Score=128.23 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=77.9
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.+ ..+.+|+.++|.|.+ .+ |.+.|.|||||++|..+.++.+..+++.++|.|.++..+|+|.|+|.|.
T Consensus 5 ~~~~~~~~~~-~~v~~G~~v~l~C~v--~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~ 80 (93)
T 1waa_A 5 LIEVEKPLYG-VEVFVGETAHFEIEL--SE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAA 80 (93)
T ss_dssp CCCEEECCCC-EEEETTSCEEEEEEE--SS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEET
T ss_pred CcEeeccCcc-eEEeCCCCEEEEEEE--CC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEEC
Confidence 4778777765 689999999999999 55 4588999999999999999999999888999999999999999999998
Q ss_pred eCCcceEEEEEEEEEe
Q psy2145 715 NRAGEAVSSTSLKVKS 730 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~ 730 (808)
|. ..++.|.|..
T Consensus 81 n~----~~sa~L~V~~ 92 (93)
T 1waa_A 81 NT----KSAANLKVKE 92 (93)
T ss_dssp TE----EEEEEEEEEC
T ss_pred CC----cEEEEEEEEc
Confidence 85 5788898875
No 384
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.65 E-value=4.6e-16 Score=157.74 Aligned_cols=168 Identities=17% Similarity=0.270 Sum_probs=113.1
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEEC--CEec------CC---------CC-CeEEEeeCcEEEEEECCCCCCCCEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRN--EKPL------ED---------SS-RITTKHDFGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~--g~~l------~~---------~~-~~~~~~~~~~~~L~I~~v~~~D~G~ 576 (808)
.+.+|++|+|.|.+ .+.+.+.|.|||. +..+ .. .. |+.+..+.... |.|.+++.+|+|.
T Consensus 12 ~v~~G~~v~L~C~~--~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~ 88 (253)
T 3to4_D 12 LVPRGQAVNLRCIL--KNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRT 88 (253)
T ss_dssp EEESSCCEEEEEEC--SCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEE
T ss_pred EEeCCCcEEEEEEe--CCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeE
Confidence 58899999999998 7888899999982 1110 00 11 44444433322 9999999999999
Q ss_pred EEEEEEeCCe------eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccC
Q psy2145 577 YICKATNALG------EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIME 650 (808)
Q Consensus 577 Y~C~a~N~~G------~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~ 650 (808)
|.|.+.+..+ .......|.|..... ...+|.+.........+.+
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~------------------------------~~~~P~v~~~~~~~~~~~~ 138 (253)
T 3to4_D 89 LYCTSSADHWTNTGQLYFGEGSKLTVLEDLK------------------------------NVFPPEVAVFEPSEAEISH 138 (253)
T ss_dssp EEEEEECSCCSTTCCEEECCCEEEEEESCST------------------------------TCBCCEEEEEECCHHHHHH
T ss_pred EEEEEecCCCCcccceEECCCEEEEEecCCC------------------------------CCCCCeEEEeCCChhhccc
Confidence 9999997654 122224666654211 1124666554444445667
Q ss_pred CceEEEEEEEeeCC-CCCe-EEEEEECCEEccCCCcEEEE--------EeCCE---EEEEEccCCCCC-cEEEEEEEEeC
Q psy2145 651 GQSAHYDCRVVPVG-DPTM-RFEWFVNGVELKMGSRFHVQ--------HDFGY---VTLDITKCVPAD-SGVYMCKAINR 716 (808)
Q Consensus 651 G~~v~l~C~v~~~g-~P~p-~i~W~~~g~~l~~~~~~~~~--------~~~~~---~~L~I~~v~~~D-~G~Y~C~A~N~ 716 (808)
|+.++|.|.+ .| .|.+ .|.|+|||.+|..+...... .++.+ +.|.|.....+| .|.|+|.|.|.
T Consensus 139 g~~~~L~C~~--~g~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~ 216 (253)
T 3to4_D 139 TQKATLVCLA--TGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFY 216 (253)
T ss_dssp HSEEEEEEEE--EEEBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEEC
T ss_pred CCceEEEEEE--ceEECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeC
Confidence 8999999999 56 6766 99999999998653221100 11212 478888887777 77999999998
Q ss_pred C
Q psy2145 717 A 717 (808)
Q Consensus 717 ~ 717 (808)
.
T Consensus 217 ~ 217 (253)
T 3to4_D 217 G 217 (253)
T ss_dssp C
T ss_pred C
Confidence 4
No 385
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.64 E-value=2.3e-16 Score=157.46 Aligned_cols=180 Identities=14% Similarity=0.238 Sum_probs=109.3
Q ss_pred CCCeEEeecCcee-ecCCCeEEEEEEEeecC-CC-CeEEEEeeCCEEccCCCceE--EEecCc---eEEEEEccCCCCCc
Q psy2145 182 QAPIFTTSLKNCE-IKEGQRAHFECRLIPVS-DN-TMKVEWFHNNVPIKSGSRFT--ETNNFG---FVALDIMQCLPEDS 253 (808)
Q Consensus 182 ~~P~~~~~~~~~~-v~~G~~v~L~C~~~~~~-~p-~~~v~W~~~g~~l~~~~~~~--~~~~~~---~~~L~I~~~~~~D~ 253 (808)
.|+.++..+.... +..|+.++|.|.+.+.. .| .+.|.|+|||.++....... ...++. ...|.|.....+|.
T Consensus 22 ~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~ 101 (240)
T 4acp_A 22 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG 101 (240)
T ss_dssp -CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHT
T ss_pred CCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCC
Confidence 3555566666666 67899999999996322 13 56899999999985432111 111111 13688888888889
Q ss_pred EEEEEEEEeCceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeE
Q psy2145 254 GVYTCRAVNALGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAA 333 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~ 333 (808)
|.|+|+|.|..+.......+.+.. ....+|.+...+......+|+.+
T Consensus 102 ~~YtC~v~h~~~~~~~~~~i~~~~---------------------------------~~~~~P~V~v~~~~~~~~~g~~~ 148 (240)
T 4acp_A 102 KEYKCKVSNKALPAPIEKTISKAK---------------------------------GQPREPQVYTLPPSRDELTKNQV 148 (240)
T ss_dssp CCEEEEEECC----CEEEEECCCC---------------------------------SCCBCCEEEEECCCGGGGGSSEE
T ss_pred CEEEEEEEcCCCCccccccccccC---------------------------------CCCCCCEEEEECCChHHhcCCce
Confidence 999999999776433222222100 01235555443333333359999
Q ss_pred EEEEEEeecC-CCc-cEEEEEECCEeccCCCcE--EEEeeCcE---EEEEEccCCCCCCeEEEEEEEcCC
Q psy2145 334 HFEARLIPVG-DSK-LKVTWLRNGVPIQASNRV--STMHDFGY---VALNFKYTYPEDSGTYTCRAVNEL 396 (808)
Q Consensus 334 ~l~C~~~~~g-~p~-~~v~W~~~g~~l~~~~~~--~~~~~~~~---~~L~I~~v~~~d~G~Y~C~a~n~~ 396 (808)
.|.|.+ .| +|. ..|.|++||.++...... ....++.+ +.|.|......|.|.|+|.|.|..
T Consensus 149 ~L~C~~--~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 149 SLTCLV--KGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEEEE--EEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTT
T ss_pred EEEEEE--eEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECC
Confidence 999999 45 555 589999999987532111 11122222 356666655568999999999975
No 386
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=129.60 Aligned_cols=93 Identities=28% Similarity=0.527 Sum_probs=85.0
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+..+++.++|.|.++..+|+|.|+|.|.
T Consensus 6 ~P~i~~~~~~-~~v~~G~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 6 KPVIVTGLQD-TTVSSDSVAKFAVKA--TGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEECCCC-EEEESSSCEEEEEEE--EEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCcc-EEEeCCCcEEEEEEE--EecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 4777766543 678999999999999 7999999999999999999999999988888999999999999999999999
Q ss_pred eCCcceEEEEEEEEEe
Q psy2145 715 NRAGEAVSSTSLKVKS 730 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~ 730 (808)
|..|..+.++.|.|++
T Consensus 83 n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 83 NSAGSVSSSCKLTIKA 98 (99)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred eCCCcEeEEEEEEEEe
Confidence 9999999999999974
No 387
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.64 E-value=3e-16 Score=159.14 Aligned_cols=173 Identities=12% Similarity=0.153 Sum_probs=115.7
Q ss_pred cCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CEE---eec------------cC-cEEEEeeCCeEEEEEccc
Q psy2145 54 TKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GRP---VTI------------GH-RFRPIHDFGYVALDIIDT 115 (808)
Q Consensus 54 ~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~~---l~~------------~~-r~~~~~~~~~~~L~I~~~ 115 (808)
..|..+ .+.+|++++|.|.+. +.+.+.+.|||. +.. +.. .. |+.+..+.... |.|.++
T Consensus 6 q~p~~v-~v~~G~~v~L~C~~~--~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v 81 (253)
T 3to4_D 6 QNPRWR-LVPRGQAVNLRCILK--NSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVA 81 (253)
T ss_dssp EECSEE-EEESSCCEEEEEECS--CTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEE
T ss_pred eCCCeE-EEeCCCcEEEEEEeC--CCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccC
Confidence 346666 899999999999987 467789999982 211 110 11 66665554443 999999
Q ss_pred CcCCCeeEEEEEEecCc------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee
Q psy2145 116 IPEDSGTYTCRAVNLVG------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS 189 (808)
Q Consensus 116 ~~~D~G~Y~C~a~n~~g------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 189 (808)
+.+|+|.|+|.+.+..+ .....+.|.|..... ...+|.+...
T Consensus 82 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~--------------------------------~~~~P~v~~~ 129 (253)
T 3to4_D 82 NMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLK--------------------------------NVFPPEVAVF 129 (253)
T ss_dssp SCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCST--------------------------------TCBCCEEEEE
T ss_pred ChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCC--------------------------------CCCCCeEEEe
Confidence 99999999999987643 112234666653210 1346666544
Q ss_pred -cCceeecCCCeEEEEEEEeecCCCCe-EEEEeeCCEEccCCCceEEEe-------cCce----EEEEEccCCCCC-cEE
Q psy2145 190 -LKNCEIKEGQRAHFECRLIPVSDNTM-KVEWFHNNVPIKSGSRFTETN-------NFGF----VALDIMQCLPED-SGV 255 (808)
Q Consensus 190 -~~~~~v~~G~~v~L~C~~~~~~~p~~-~v~W~~~g~~l~~~~~~~~~~-------~~~~----~~L~I~~~~~~D-~G~ 255 (808)
+....+.+|+.++|.|.+.+ ..|.+ .|.|+|||.++..+....... .++. ..|.|.....+| .|.
T Consensus 130 ~~~~~~~~~g~~~~L~C~~~g-~~P~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ 208 (253)
T 3to4_D 130 EPSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNH 208 (253)
T ss_dssp ECCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCE
T ss_pred CCChhhcccCCceEEEEEEce-EECCcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCE
Confidence 34445567899999999964 24554 899999999986543211100 2222 368888887777 779
Q ss_pred EEEEEEeC
Q psy2145 256 YTCRAVNA 263 (808)
Q Consensus 256 Y~C~a~n~ 263 (808)
|+|.|.|.
T Consensus 209 ytC~v~h~ 216 (253)
T 3to4_D 209 FRCQVQFY 216 (253)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEeC
Confidence 99999985
No 388
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.64 E-value=9e-16 Score=132.58 Aligned_cols=95 Identities=29% Similarity=0.529 Sum_probs=85.4
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+..+++.++|.|.++..+|+|.|+|.|.
T Consensus 13 ~P~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 13 PPCFLRFPR-PVRVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEECCC-CEEEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeeEcCCc-cEEEeCCCeEEEEEEE--eecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 477766654 4678999999999999 7999999999999999999999999888888999999999999999999999
Q ss_pred eCCcceEEEEEEEEEeCC
Q psy2145 715 NRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p 732 (808)
|..|..+.++.|.|..+|
T Consensus 90 n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTEEEEEEEEEEEEC--
T ss_pred cCCCcEEEEEEEEEEcCC
Confidence 999999999999998765
No 389
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.64 E-value=3.7e-16 Score=132.59 Aligned_cols=92 Identities=17% Similarity=0.250 Sum_probs=81.7
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.+ ..+.+|+.+.|.|.+ .|.|.|.|||||..|..+.++.+..++..++|.|.++..+|+|.|+|.|.
T Consensus 7 p~~~~~~~~~-~~v~~G~~v~l~C~v----~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (100)
T 2yuz_A 7 GLKILTPLTD-QTVNLGKEICLKCEI----SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPD 81 (100)
T ss_dssp CCCCSBCCCC-EEEETTSCCCEEEEC----SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEES
T ss_pred CCEEeccCCc-eEEcCCCCEEEEEEe----CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEc
Confidence 3566666554 679999999999986 68899999999999999999999998888999999999999999999999
Q ss_pred eCCcceEEEEEEEEEeCCC
Q psy2145 715 NRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~ 733 (808)
|. ..+.++.|.|..+|.
T Consensus 82 N~--~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 82 AY--NVTLPAKVHVISGPS 98 (100)
T ss_dssp SS--CCCEEEEEEEECCSC
T ss_pred CC--CeeEEEEEEEeCCCC
Confidence 98 677899999998864
No 390
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.63 E-value=6e-16 Score=156.73 Aligned_cols=177 Identities=13% Similarity=0.198 Sum_probs=118.5
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee------------ccCcEEEEee-CCeEEEEEc
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT------------IGHRFRPIHD-FGYVALDII 113 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~------------~~~r~~~~~~-~~~~~L~I~ 113 (808)
+...|..+ .+.+|++++|.|.+. .+.+.+.|||+. . .+. ...|+.+..+ .+..+|.|.
T Consensus 6 v~q~p~~v-~v~~G~~v~L~C~~~---~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~ 81 (252)
T 1oga_E 6 ITQSPKYL-FRKEGQNVTLSCEQN---LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVT 81 (252)
T ss_dssp EECSCSEE-EEETTCCEEECCEEC---SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEEC
T ss_pred ceEcCCeE-EEcCCCcEEEEEEeC---CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEEC
Confidence 34556777 899999999999985 346799999842 1 111 1356666542 345689999
Q ss_pred ccCcCCCeeEEEEEEecC---cceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEee-
Q psy2145 114 DTIPEDSGTYTCRAVNLV---GFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTS- 189 (808)
Q Consensus 114 ~~~~~D~G~Y~C~a~n~~---g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~- 189 (808)
+++.+|+|.|.|.+.|.. ......+.|.|.... ....+|.+...
T Consensus 82 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------~~~~~P~v~~~~ 129 (252)
T 1oga_E 82 SAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDL--------------------------------KNVFPPEVAVFE 129 (252)
T ss_dssp SCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCG--------------------------------GGCBCCEEEEEC
T ss_pred cCChhhCEEEEEEEecCCccceeECCCEEEEEeccc--------------------------------CCCCCCeEEEEC
Confidence 999999999999999852 111223456665310 01346777654
Q ss_pred cCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceE---E----EecCce----EEEEEccCCCC-CcEEE
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFT---E----TNNFGF----VALDIMQCLPE-DSGVY 256 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~---~----~~~~~~----~~L~I~~~~~~-D~G~Y 256 (808)
+....+.+|+.++|.|.+.+ ..|. +.|.|+|||..+..+.... . ...++. ..|.|...... |.|.|
T Consensus 130 ~~~~~~~~g~~~~L~C~~~g-~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~y 208 (252)
T 1oga_E 130 PSEAEISHTQKATLVCLATG-FYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHF 208 (252)
T ss_dssp CCHHHHHHHSEEEEEEEEEE-EBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEE
T ss_pred CChhhhccCCceEEEEEEee-EcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEE
Confidence 44455678999999999953 2354 6999999999986543211 0 012232 24788776654 67899
Q ss_pred EEEEEeCce
Q psy2145 257 TCRAVNALG 265 (808)
Q Consensus 257 ~C~a~n~~g 265 (808)
+|.|.|...
T Consensus 209 tC~v~~~~l 217 (252)
T 1oga_E 209 RCQVQFYGL 217 (252)
T ss_dssp EEEEEECCB
T ss_pred EEEEEcCCC
Confidence 999999654
No 391
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.63 E-value=1.8e-15 Score=153.13 Aligned_cols=171 Identities=15% Similarity=0.276 Sum_probs=113.4
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--Ee---c------------CCCCCeEEEee-CcEEEEEECCCCCCCCEE
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KP---L------------EDSSRITTKHD-FGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~---l------------~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~ 576 (808)
.+.+|++++|.|.+ . .+.+.+.|+|+. .. + ....|+.+..+ .+...|.|.+++.+|+|.
T Consensus 14 ~v~~G~~v~L~C~~--~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~ 90 (252)
T 1oga_E 14 FRKEGQNVTLSCEQ--N-LNHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAF 90 (252)
T ss_dssp EEETTCCEEECCEE--C-SCCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEE
T ss_pred EEcCCCcEEEEEEe--C-CCCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEE
Confidence 68999999999998 3 457899999853 11 1 01346655432 334579999999999999
Q ss_pred EEEEEEeCC---eeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 577 YICKATNAL---GEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 577 Y~C~a~N~~---G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
|.|.+.|.. ........|.|..... ...+|.+.........+.+|+.
T Consensus 91 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~------------------------------~~~~P~v~~~~~~~~~~~~g~~ 140 (252)
T 1oga_E 91 YLCASSSRSSYEQYFGPGTRLTVTEDLK------------------------------NVFPPEVAVFEPSEAEISHTQK 140 (252)
T ss_dssp EEEEEESSTTSCCEECCCEEEEEESCGG------------------------------GCBCCEEEEECCCHHHHHHHSE
T ss_pred EEEEEecCCccceeECCCEEEEEecccC------------------------------CCCCCeEEEECCChhhhccCCc
Confidence 999999962 1111224566654210 0124666554333345668999
Q ss_pred EEEEEEEeeCCC-CC-eEEEEEECCEEccCCCcEE---E-----EEeCC---EEEEEEccCCCC-CcEEEEEEEEeCCcc
Q psy2145 654 AHYDCRVVPVGD-PT-MRFEWFVNGVELKMGSRFH---V-----QHDFG---YVTLDITKCVPA-DSGVYMCKAINRAGE 719 (808)
Q Consensus 654 v~l~C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~~---~-----~~~~~---~~~L~I~~v~~~-D~G~Y~C~A~N~~G~ 719 (808)
++|.|.+ .|. |. +.|.|+|||..|..+.... . ..++. .+.|.|...... |.|.|+|.|.|..+.
T Consensus 141 ~~L~C~~--~g~~P~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 141 ATLVCLA--TGFYPDHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp EEEEEEE--EEEBSSCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred eEEEEEE--eeEcCCCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 9999999 564 65 5999999999887543211 0 01111 235888776654 678999999998764
Q ss_pred e
Q psy2145 720 A 720 (808)
Q Consensus 720 ~ 720 (808)
.
T Consensus 219 ~ 219 (252)
T 1oga_E 219 E 219 (252)
T ss_dssp T
T ss_pred C
Confidence 4
No 392
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.63 E-value=2.5e-15 Score=131.68 Aligned_cols=100 Identities=26% Similarity=0.454 Sum_probs=87.2
Q ss_pred ccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccC-CCcEEEEEeC-CEEEEEEccCCCCCcEEE
Q psy2145 632 QYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKM-GSRFHVQHDF-GYVTLDITKCVPADSGVY 709 (808)
Q Consensus 632 ~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y 709 (808)
...+|.|+..+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+.. ..++.+..++ +.++|.|.++..+|+|.|
T Consensus 12 ~~~~p~f~~~p~~-~~v~~G~~v~L~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 12 HKRAPMFIYKPQS-KKVLEGDSVKLECQI--SAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp CCBCCCBSSCCCC-EEEETTEEEEEEEEB--CCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEE
T ss_pred CCCCCeEEeCCCc-EEEeCCCcEEEEEEE--eccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 3456888877765 679999999999999 7999999999999999985 5778776654 566999999999999999
Q ss_pred EEEEEeCCcceEEEEEEEEEeCCCc
Q psy2145 710 MCKAINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 710 ~C~A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
+|.|.|..|..+.++.|.|..+|..
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCeEEEEEEEEEeCCCCC
Confidence 9999999999999999999988754
No 393
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.63 E-value=2.2e-15 Score=131.35 Aligned_cols=85 Identities=20% Similarity=0.171 Sum_probs=73.7
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeC-------CEEEEEEccCCCCCcEEEEEEEEeCCcce
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF-------GYVTLDITKCVPADSGVYMCKAINRAGEA 720 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~-------~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 720 (808)
...+..+.|.|.+ .|+|.|.|+|+|||++|..+.++.+.... ...+|.|.++...|+|.|+|+|+|.+|.+
T Consensus 12 ~~~~~~~~l~c~v--~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~ 89 (126)
T 1he7_A 12 AVEMHHWCIPFSV--DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 89 (126)
T ss_dssp CCCCCEEEEEEEE--CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEE
T ss_pred CccCccEEEEEEE--eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeE
Confidence 3467899999999 89999999999999999988876554321 24689999999999999999999999999
Q ss_pred EEEEEEEEEeCCCc
Q psy2145 721 VSSTSLKVKSKSDI 734 (808)
Q Consensus 721 ~~s~~l~V~~~p~~ 734 (808)
..++.|.|...|.-
T Consensus 90 ~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 90 SASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEECCCSCTTS
T ss_pred EEEEEEEEEcCCCC
Confidence 99999999887743
No 394
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.63 E-value=2.2e-15 Score=153.24 Aligned_cols=183 Identities=13% Similarity=0.195 Sum_probs=114.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC-----EEee-------------ccCcEEEEee--CCeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG-----RPVT-------------IGHRFRPIHD--FGYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g-----~~l~-------------~~~r~~~~~~--~~~~~L~I 112 (808)
+..|..+ .+.+|++|+|.|.+.+.......|.|||.. ..+. ...|+.+..+ .+.++|.|
T Consensus 4 v~~~~~v-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 82 (263)
T 3iu4_H 4 LKESGPG-LVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKM 82 (263)
T ss_dssp EEEECCS-EECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEE
T ss_pred EECCCCE-EEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEE
Confidence 3455666 899999999999997422235689999832 1120 1357776544 36678999
Q ss_pred cccCcCCCeeEEEEEEecCc--------ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCC
Q psy2145 113 IDTIPEDSGTYTCRAVNLVG--------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAP 184 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~~g--------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 184 (808)
.+++.+|+|.|.|.+.+..+ .....+.|.|.... ..+|
T Consensus 83 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~----------------------------------~~~P 128 (263)
T 3iu4_H 83 NSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS----------------------------------TKGP 128 (263)
T ss_dssp CSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC----------------------------------CBCC
T ss_pred CCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEeccc----------------------------------CCCC
Confidence 99999999999999987531 11122456664211 3466
Q ss_pred eEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEeeCCEEccCCCce--EEEecCce----EEEEEccCCCCCcEEEE
Q psy2145 185 IFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFHNNVPIKSGSRF--TETNNFGF----VALDIMQCLPEDSGVYT 257 (808)
Q Consensus 185 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~--~~~~~~~~----~~L~I~~~~~~D~G~Y~ 257 (808)
.+........+.+|+.++|.|.+.+. .| .+.|.| ++..+..+... .....++. ..|.|.....+| |.|+
T Consensus 129 ~v~~~~~~~~~~~g~~~~L~C~~~~~-~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~yt 204 (263)
T 3iu4_H 129 SVFPLAPSSKGSTSGTAALGCLVKDY-FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYI 204 (263)
T ss_dssp EEEEECCCCCC----EEEEEEEEEEE-BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCE
T ss_pred EEEEccCccccccCCcEEEEEEEEeE-eCCceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEE
Confidence 66644444456689999999999753 34 478999 55443221100 01112221 268898888888 9999
Q ss_pred EEEEeCceeEEEEEEEE
Q psy2145 258 CRAVNALGQAVTSGNLL 274 (808)
Q Consensus 258 C~a~n~~g~~~~~~~l~ 274 (808)
|.|.|..+.......+.
T Consensus 205 C~v~h~~~~~~~~~~~~ 221 (263)
T 3iu4_H 205 CNVNHKPSNTKVDKKVE 221 (263)
T ss_dssp EEEEEGGGTEEEEEECC
T ss_pred EEEEECCCCcceeEEEc
Confidence 99999877654444433
No 395
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.62 E-value=5.9e-15 Score=146.60 Aligned_cols=182 Identities=13% Similarity=0.162 Sum_probs=117.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee--------------ccCcEEEEeeC--CeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT--------------IGHRFRPIHDF--GYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~--------------~~~r~~~~~~~--~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+...+...+.|||.. . .+. ...|+.+..+. +.++|.
T Consensus 4 v~q~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 82 (226)
T 3mlr_H 4 LVESGGE-VKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQ 82 (226)
T ss_dssp EEECCCE-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEE
T ss_pred EEcCCCE-EEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEE
Confidence 3456666 899999999999997422345689999832 1 110 12577765443 667899
Q ss_pred EcccCcCCCeeEEEEEEecCcc---------eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCC
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVGF---------AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQ 182 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g~---------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (808)
|.+++.+|+|.|.|.+.+..+. ....+.|.|... ...
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~----------------------------------~~~ 128 (226)
T 3mlr_H 83 WTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSG----------------------------------TTK 128 (226)
T ss_dssp ESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCC----------------------------------CCB
T ss_pred ECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccC----------------------------------CCC
Confidence 9999999999999999874210 012234555421 134
Q ss_pred CCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce--EEEecCc----eEEEEEccCCCCCcEEE
Q psy2145 183 APIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF--TETNNFG----FVALDIMQCLPEDSGVY 256 (808)
Q Consensus 183 ~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~I~~~~~~D~G~Y 256 (808)
+|.+...+....+.+|+.++|.|.+.+...+.+.+.| ++..+..+... .....+| ...|.|.....+| |.|
T Consensus 129 ~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~y 205 (226)
T 3mlr_H 129 GPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTY 205 (226)
T ss_dssp CCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCC
T ss_pred CCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeE
Confidence 6767654445556789999999999753322678999 44433211100 0111122 1268999999999 999
Q ss_pred EEEEEeCceeEEEEEE
Q psy2145 257 TCRAVNALGQAVTSGN 272 (808)
Q Consensus 257 ~C~a~n~~g~~~~~~~ 272 (808)
+|.|.|..+.......
T Consensus 206 tC~v~h~~~~~~~~~~ 221 (226)
T 3mlr_H 206 ICNVNHKPSNTKVDKK 221 (226)
T ss_dssp EEEEEEGGGTEEEEEE
T ss_pred EEEEEECCCCcCeEEE
Confidence 9999998776554433
No 396
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.62 E-value=1.6e-15 Score=151.25 Aligned_cols=182 Identities=13% Similarity=0.092 Sum_probs=115.7
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee-------------ccCcEEEEeeC--CeEEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT-------------IGHRFRPIHDF--GYVALDI 112 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~-------------~~~r~~~~~~~--~~~~L~I 112 (808)
...|..+ .+.+|++++|.|.+.+...+...+.|||.. . .|. ...|+.+..+. +.++|.|
T Consensus 5 ~q~p~~v-~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 5 EQPEISI-SRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp ECSCSEE-EEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred cccCCEE-EEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 3456677 899999999999998421256789999842 1 111 23567766543 6679999
Q ss_pred cccCcCCCeeEEEEEEec--Cc--ceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 113 IDTIPEDSGTYTCRAVNL--VG--FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 113 ~~~~~~D~G~Y~C~a~n~--~g--~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
.+++.+|+|.|.|.+.+. .. .....+.|.|......+. ......|.+.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~---------------------------~~~~p~~~v~- 135 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLD---------------------------ADISPKPTIF- 135 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCC---------------------------SCCSCCCCEE-
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCc---------------------------ccCCCCceEE-
Confidence 999999999999999874 11 111235677752110000 0001122222
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCC-eEEEEee-CCEEccCCCceEEEecCce----EEEEEccCCCCCcEEEEEEEEe
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFH-NNVPIKSGSRFTETNNFGF----VALDIMQCLPEDSGVYTCRAVN 262 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~-~g~~l~~~~~~~~~~~~~~----~~L~I~~~~~~D~G~Y~C~a~n 262 (808)
.+....+.+|+.++|.|.+.+ ..|. +.|.|++ ||..+...........++. ..|.|..... | |.|+|.|.|
T Consensus 136 ~p~~~~v~~g~~~~L~C~~~g-~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~ 212 (230)
T 1ypz_F 136 LPSVAETNLHKTGTYLCLLEA-FFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKH 212 (230)
T ss_dssp CCCHHHHHHHSCEEEEEEEEE-ESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEEC
T ss_pred CCCchhhccCCcceEEEEEee-ecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEE
Confidence 244455678999999999963 3354 6999999 8887753221111122222 3689988876 5 999999999
Q ss_pred Ccee
Q psy2145 263 ALGQ 266 (808)
Q Consensus 263 ~~g~ 266 (808)
..+.
T Consensus 213 ~~~~ 216 (230)
T 1ypz_F 213 ENNK 216 (230)
T ss_dssp SSCT
T ss_pred CCCC
Confidence 7664
No 397
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.62 E-value=3.4e-15 Score=127.86 Aligned_cols=96 Identities=26% Similarity=0.462 Sum_probs=88.1
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+|.|..++.+. .+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+..+++..+|.|.++..+|+|.|+|.
T Consensus 6 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 6 DHAPRITLRMRSH-RVPCGQNTRFILNV--QSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp CEEEEEEECCCCE-EEETTCCEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCcce-EEeCCCeEEEEEEE--EecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEE
Confidence 4578999888776 68999999999999 79999999999999999998899888888888999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEec
Q psy2145 581 ATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~ 599 (808)
|.|..|..+.++.|.|...
T Consensus 83 a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 83 CTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEeCCCcEEEEEEEEEECC
Confidence 9999999999999999753
No 398
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=1.5e-15 Score=129.36 Aligned_cols=95 Identities=31% Similarity=0.483 Sum_probs=80.5
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE-EEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHV-QHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.+..+ ...++..+|.|.++..+|+|.|+|.|
T Consensus 5 ~P~~~~~p~-~~~~~~G~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 5 PPRFIQVPE-NMSIDEGRFCRMDFKV--SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp EEECCCCCC-CEEEETTCCEEEEEEC--EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEeCCC-CEEecCCCEEEEEEEE--EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 466655543 3678999999999999 6999999999999999988765433 34566789999999999999999999
Q ss_pred EeCCcceEEEEEEEEEeCC
Q psy2145 714 INRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~~p 732 (808)
.|..|..+.++.|.|..++
T Consensus 82 ~n~~g~~~~~~~l~V~~~e 100 (100)
T 2kdg_A 82 KNRAGEATFTVQLDVLAKE 100 (100)
T ss_dssp EETTEEEEEEEEEEEECCC
T ss_pred EcCCCeEEEEEEEEEEecC
Confidence 9999999999999998763
No 399
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.61 E-value=5.9e-15 Score=124.78 Aligned_cols=84 Identities=24% Similarity=0.442 Sum_probs=78.4
Q ss_pred CccccCCceEEEEEEEeeCCC-CCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGD-PTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~-P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
...+.+|+.+.|.|.+ .|. |.|.|.|+|+|..+..+.++.+...++.++|.|.++..+|+|.|+|.|.|.+|....+
T Consensus 10 ~~~v~~G~~v~l~C~~--~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 87 (97)
T 2bk8_A 10 HAVGEEGGHVKYVCKI--ENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSY 87 (97)
T ss_dssp CEEECTTCCEEEEEEE--ESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CEEEcCCCcEEEEEEE--eccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEE
Confidence 4678999999999999 786 9999999999999999999999888888999999999999999999999999999999
Q ss_pred EEEEEEe
Q psy2145 724 TSLKVKS 730 (808)
Q Consensus 724 ~~l~V~~ 730 (808)
+.|.|.+
T Consensus 88 ~~l~V~~ 94 (97)
T 2bk8_A 88 AELFVKG 94 (97)
T ss_dssp EEEEETT
T ss_pred EEEEEEe
Confidence 9999864
No 400
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.61 E-value=1.6e-15 Score=127.16 Aligned_cols=90 Identities=22% Similarity=0.265 Sum_probs=76.1
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECC--EEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNG--VELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g--~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|+| ..+.... .+....+..+|.|.++..+|+|.|+|.
T Consensus 2 ~P~i~~~~~-~~~v~~G~~~~l~C~~--~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASR-KIKIKAGFTHNLEVDF--IGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCC-EEEECTTBCCEEEEEE--ECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCC-ceEEeCCCEEEEEEEE--EEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEE
Confidence 466654443 4678999999999999 79999999999999 8886553 344556778999999999999999999
Q ss_pred EEeCCcceEEEEEEEEE
Q psy2145 713 AINRAGEAVSSTSLKVK 729 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~ 729 (808)
|.|..|.++.++.|.|+
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999999999874
No 401
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.61 E-value=2e-15 Score=128.30 Aligned_cols=93 Identities=29% Similarity=0.500 Sum_probs=80.4
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC-cEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS-RFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+. ++.+..+++.++|.|.++..+|+|.|+|.|
T Consensus 5 ~P~~~~~~~~-~~v~~G~~v~l~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (99)
T 1u2h_A 5 PPTFKVSLMD-QSVREGQDVIMSIRV--QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKA 81 (99)
T ss_dssp EEEEEECCCC-EEEETTCCEEEEEEE--EEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEcCCc-eEecCCCEEEEEEEE--EEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEE
Confidence 4667666543 578999999999999 799999999999999998754 455555667779999999999999999999
Q ss_pred EeCCcceEEEEEEEEEe
Q psy2145 714 INRAGEAVSSTSLKVKS 730 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~ 730 (808)
.|..|..+.++.|.|.+
T Consensus 82 ~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 82 VNEYGARQCEARLEVRG 98 (99)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EECCCceeEEEEEEEEC
Confidence 99999999999999975
No 402
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.61 E-value=8.5e-15 Score=148.59 Aligned_cols=185 Identities=15% Similarity=0.210 Sum_probs=118.6
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--C---EEee--------------ccCcEEEEee--CCeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--G---RPVT--------------IGHRFRPIHD--FGYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g---~~l~--------------~~~r~~~~~~--~~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+.......+.|||. + ..+. ...|+.+..+ .+.++|.
T Consensus 27 v~~~~~~-~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 105 (256)
T 3sob_H 27 LVESGGG-LVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQ 105 (256)
T ss_dssp EEEECCC-EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEE
T ss_pred EEecCcE-EEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEE
Confidence 3445566 79999999999999742234568999983 2 1110 1257776554 3667899
Q ss_pred EcccCcCCCeeEEEEEEecCc-----------ceEEEEEEEEecCCCccccccccccceeeeeecccccccccccccccc
Q psy2145 112 IIDTIPEDSGTYTCRAVNLVG-----------FAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETT 180 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~~g-----------~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (808)
|.+++.+|+|.|.|.+.+..| .....+.|.|....
T Consensus 106 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~---------------------------------- 151 (256)
T 3sob_H 106 MNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS---------------------------------- 151 (256)
T ss_dssp ECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC----------------------------------
T ss_pred ECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC----------------------------------
Confidence 999999999999999987431 11223456664311
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCC-CeEEEEeeCCEEccCCCce--EEEecCc----eEEEEEccCCCCCc
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDN-TMKVEWFHNNVPIKSGSRF--TETNNFG----FVALDIMQCLPEDS 253 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~--~~~~~~~----~~~L~I~~~~~~D~ 253 (808)
..+|.+........+.+|+.++|.|.+.+. .| ...+.| +|..+..+... .....++ ...|.|.....+|
T Consensus 152 ~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~-~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d- 227 (256)
T 3sob_H 152 TKGPSVFPLAPSSKSTSGGTAALGCLVKDY-FPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT- 227 (256)
T ss_dssp CBCCEEEEECCC-----TTEEEEEEEEEEE-BSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-
T ss_pred CCCCEEEEECCCcccccCCcEEEEEEEEEE-ECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-
Confidence 346666654445556789999999999642 34 568999 55544321100 0111122 1368899999999
Q ss_pred EEEEEEEEeCceeEEEEEEEEEe
Q psy2145 254 GVYTCRAVNALGQAVTSGNLLVH 276 (808)
Q Consensus 254 G~Y~C~a~n~~g~~~~~~~l~V~ 276 (808)
|.|+|.|.|..+.......|.+.
T Consensus 228 ~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 228 QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp CCCEEEEEEGGGTEEEEEECCCC
T ss_pred ceEEEEEEeCCCCcceEEEeccc
Confidence 99999999988766666665543
No 403
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.61 E-value=7.7e-16 Score=125.39 Aligned_cols=79 Identities=18% Similarity=0.320 Sum_probs=71.1
Q ss_pred ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
+.+.+|+.+.|.|.+ .| |.|.|.|||||++|..+.++.+..+++.++|.|.++..+|+|.|+|.|.| .+.++.
T Consensus 6 v~~~~G~~v~l~C~v--s~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~ 78 (84)
T 2lu7_A 6 VRSTPGGDLELVVHL--SG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFL 78 (84)
T ss_dssp EEECTTSCEEEECCC--SC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEE
T ss_pred EEEecCCCEEEEEEE--CC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEE
Confidence 568899999999998 56 88999999999999999999999999899999999999999999999744 577888
Q ss_pred EEEEeC
Q psy2145 726 LKVKSK 731 (808)
Q Consensus 726 l~V~~~ 731 (808)
|.|+.|
T Consensus 79 l~V~eP 84 (84)
T 2lu7_A 79 VSVEEP 84 (84)
T ss_dssp EEECCC
T ss_pred EEEECC
Confidence 988754
No 404
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.61 E-value=1.1e-15 Score=152.25 Aligned_cols=172 Identities=15% Similarity=0.261 Sum_probs=110.7
Q ss_pred cccCCCceEEEEEEeeCCC--CCcEEEEEECC--EecC----------------CCCCeEEEeeC--cEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGD--PTLKVEWFRNE--KPLE----------------DSSRITTKHDF--GYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~--P~~~v~W~k~g--~~l~----------------~~~~~~~~~~~--~~~~L~I~~v~~~ 572 (808)
.+.+|++|+|.|.+ .+. +.+.+.|||.. ..+. ...|+.+..+. +.++|.|.+++.+
T Consensus 12 ~~~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (230)
T 1ypz_F 12 SRPRDETAQISCKV--FIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEE 89 (230)
T ss_dssp EEETTSCEEEEEEE--CCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEe--eccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChh
Confidence 58899999999999 453 56789999842 2110 23456655432 5678999999999
Q ss_pred CCEEEEEEEEeC--Ce--eEEEEEEEEEEeccc-ccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCcc
Q psy2145 573 DEGIYICKATNA--LG--EAVTTASMKIKTKAG-LQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSE 647 (808)
Q Consensus 573 D~G~Y~C~a~N~--~G--~~~~s~~l~V~~~~~-i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 647 (808)
|+|.|.|.+.|. .. .......|.|..... +. . .....|.+.. +....
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~--~------------------------~~~p~~~v~~--p~~~~ 141 (230)
T 1ypz_F 90 DEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLD--A------------------------DISPKPTIFL--PSVAE 141 (230)
T ss_dssp GCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCC--S------------------------CCSCCCCEEC--CCHHH
T ss_pred hCEEEEEEEECCCCCcccccCCCEEEEEecccccCc--c------------------------cCCCCceEEC--CCchh
Confidence 999999999985 11 111224677763110 00 0 0001132222 22234
Q ss_pred ccCCceEEEEEEEeeCCC-CC-eEEEEEE-CCEEccCCCcEEEEEeCC----EEEEEEccCCCCCcEEEEEEEEeCCcce
Q psy2145 648 IMEGQSAHYDCRVVPVGD-PT-MRFEWFV-NGVELKMGSRFHVQHDFG----YVTLDITKCVPADSGVYMCKAINRAGEA 720 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~-P~-p~i~W~~-~g~~l~~~~~~~~~~~~~----~~~L~I~~v~~~D~G~Y~C~A~N~~G~~ 720 (808)
+.+|+.++|.|.+ .|. |. +.|.|++ ||+.|..+....+...++ .+.|.|..... | |.|+|.|.|..+..
T Consensus 142 v~~g~~~~L~C~~--~g~~P~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~~ 217 (230)
T 1ypz_F 142 TNLHKTGTYLCLL--EAFFPDVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNKG 217 (230)
T ss_dssp HHHHSCEEEEEEE--EEESSCCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCTT
T ss_pred hccCCcceEEEEE--eeecCCCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCCC
Confidence 6779999999999 454 75 6999999 998775432111112222 24789988775 5 99999999998754
No 405
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.61 E-value=8.2e-16 Score=127.40 Aligned_cols=75 Identities=15% Similarity=0.321 Sum_probs=67.3
Q ss_pred cccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 647 EIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 647 ~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
.+.+|+.+.|.|.+ .| |.|.|.|+|||++|..+.++.+..+++.++|.|.++..+|+|.|+|.|.|. +.++.|
T Consensus 17 ~~~~g~~v~l~C~v--~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~----~~~~~l 89 (91)
T 2lvc_A 17 HAITSECVMLACEV--DR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDE----CAYFTV 89 (91)
T ss_dssp ECCTTCCEEEEEEC--SC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSC----EEEEEE
T ss_pred EEECCCcEEEEEEE--CC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcce----EEEEEE
Confidence 46789999999998 45 889999999999999999999999999999999999999999999998665 667777
Q ss_pred EE
Q psy2145 727 KV 728 (808)
Q Consensus 727 ~V 728 (808)
+|
T Consensus 90 tV 91 (91)
T 2lvc_A 90 TI 91 (91)
T ss_dssp EC
T ss_pred EC
Confidence 65
No 406
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.61 E-value=5.6e-15 Score=129.13 Aligned_cols=97 Identities=15% Similarity=0.315 Sum_probs=88.1
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.||.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+..+.++.+....+...|.|.+++.+|+|.|+|.|
T Consensus 6 ~pp~i~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 6 SGPQIIQFPEDQ-KVRAGESVELFGKV--TGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCEESCCCCSE-EEETTCCEEEEEEE--ESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCEEEeCCCCe-EEeCCCeEEEEEEE--EcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 578898877776 68999999999999 799999999999999999888888887776779999999999999999999
Q ss_pred EeCCeeEEEEEEEEEEeccc
Q psy2145 582 TNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~~ 601 (808)
.|..|....++.|.|...|.
T Consensus 83 ~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp ECSSCEEECCEEEEEECSCS
T ss_pred EECCCcEEEEEEEEEECCCC
Confidence 99999999999999987654
No 407
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.60 E-value=7.1e-15 Score=146.79 Aligned_cols=172 Identities=16% Similarity=0.308 Sum_probs=112.8
Q ss_pred cccCCCceEEEEEEeeCCC----CCcEEEEEECC--E---ec-----C-----------CCCCeEEEee--CcEEEEEEC
Q psy2145 515 AVEEGKNAHFSCRLIPVGD----PTLKVEWFRNE--K---PL-----E-----------DSSRITTKHD--FGYVAMDLS 567 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~----P~~~v~W~k~g--~---~l-----~-----------~~~~~~~~~~--~~~~~L~I~ 567 (808)
.+.+|++|+|.|.+. +. +...|.|||.. . .+ . ...|+.+..+ .+.++|.|.
T Consensus 11 ~v~~G~~v~L~C~~~--~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 88 (232)
T 3qhz_H 11 LVKPTQTLTLTCSFS--GFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMT 88 (232)
T ss_dssp EECTTSCEEEEEEEE--SCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EECCCCcEEEEEEEe--CcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEEC
Confidence 588999999999984 32 33445999732 1 11 0 1246766654 366789999
Q ss_pred CCCCCCCEEEEEEEEeCCe--------eEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEE
Q psy2145 568 HVRAEDEGIYICKATNALG--------EAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFT 639 (808)
Q Consensus 568 ~v~~~D~G~Y~C~a~N~~G--------~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~ 639 (808)
+++.+|+|.|.|.+.|..| .......|.|...+ ..+|.+.
T Consensus 89 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--------------------------------~~~P~v~ 136 (232)
T 3qhz_H 89 NMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS--------------------------------TKGPSVF 136 (232)
T ss_dssp SCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC--------------------------------CBCCEEE
T ss_pred cCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC--------------------------------CCCCEEE
Confidence 9999999999999998631 12223455554211 1246555
Q ss_pred eecCCCccccCCceEEEEEEEeeCC-CC-CeEEEEEECCEEcc---------CCCcEEEEEeCCEEEEEEccCCCCCcEE
Q psy2145 640 QLLTGTSEIMEGQSAHYDCRVVPVG-DP-TMRFEWFVNGVELK---------MGSRFHVQHDFGYVTLDITKCVPADSGV 708 (808)
Q Consensus 640 ~~~~~~~~v~~G~~v~l~C~v~~~g-~P-~p~i~W~~~g~~l~---------~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 708 (808)
..... ..+..|+.++|.|.+ .| .| .+.|.|+++|..+. .+..|.+ .+.|.|......| |.
T Consensus 137 ~~~~~-~~~~~g~~v~L~C~~--~~~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-g~ 207 (232)
T 3qhz_H 137 PLAPS-SKSTSGGTAALGCLV--KDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QT 207 (232)
T ss_dssp EECC--------CEEEEEEEE--EEEBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGGGT-CC
T ss_pred Eeccc-ccccCCCcEEEEEEE--eeEeCCCeEEEEEECCEecceeeccceeCCCCCEEE-----EEEEEEchhhcCC-CE
Confidence 33332 346679999999999 45 34 45788999997432 1223322 2479999998889 99
Q ss_pred EEEEEEeCCcceEEEEEEEEE
Q psy2145 709 YMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 709 Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
|+|.|.|..|.......|.+.
T Consensus 208 ytC~v~~~~~~~~~~~~l~~~ 228 (232)
T 3qhz_H 208 YICNVNHKPSNTKVDKRVEPK 228 (232)
T ss_dssp CEEEEEEGGGTEEEEEECCCC
T ss_pred EEEEEEeCCCCccEEEEeCCC
Confidence 999999999988888777653
No 408
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.60 E-value=1e-14 Score=146.31 Aligned_cols=184 Identities=11% Similarity=0.090 Sum_probs=116.9
Q ss_pred ecCceeecCCCeEEEEEEEeecCCC--CeEEEEeeC--CEE---c---c----------------CCCceEEEec--Cce
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDN--TMKVEWFHN--NVP---I---K----------------SGSRFTETNN--FGF 240 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p--~~~v~W~~~--g~~---l---~----------------~~~~~~~~~~--~~~ 240 (808)
.+..+.+.+|++|+|.|.+.+...+ ...+.|||. +.. + . ...|+.+..+ .+.
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 85 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNL 85 (239)
T ss_dssp EESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTE
T ss_pred cCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCE
Confidence 4556789999999999999532222 568999983 211 1 1 1235554432 456
Q ss_pred EEEEEccCCCCCcEEEEEEEEeCce-----------e--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccc
Q psy2145 241 VALDIMQCLPEDSGVYTCRAVNALG-----------Q--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSI 307 (808)
Q Consensus 241 ~~L~I~~~~~~D~G~Y~C~a~n~~g-----------~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~ 307 (808)
++|.|.+++.+|+|.|.|.+.+..+ . ......|.|...
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~----------------------------- 136 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSA----------------------------- 136 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCC-----------------------------
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccC-----------------------------
Confidence 7899999999999999999987532 1 112345666421
Q ss_pred cccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCC-ccEEEEEECCEeccCCCcEEEEe-eCc---EEEEEEccCCC
Q psy2145 308 IEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDS-KLKVTWLRNGVPIQASNRVSTMH-DFG---YVALNFKYTYP 382 (808)
Q Consensus 308 ~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p-~~~v~W~~~g~~l~~~~~~~~~~-~~~---~~~L~I~~v~~ 382 (808)
...+|.+........+..|+.+.|.|.+.. ..| ...+.|+++|..+.......... ++. .+.|.|.....
T Consensus 137 ----~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~-~~p~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~ 211 (239)
T 3tv3_H 137 ----STKGPSVFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSL 211 (239)
T ss_dssp ----CCBCCEEEEECCCCCC--TTEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGT
T ss_pred ----CCcCCEEEEECCChhhccCCcEEEEEEEee-EeCCCeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhc
Confidence 123555553333444567999999999942 245 35699999987542111000111 111 13688999888
Q ss_pred CCCeEEEEEEEcCCcceEEEEEEEE
Q psy2145 383 EDSGTYTCRAVNELGEAVTSSTLFV 407 (808)
Q Consensus 383 ~d~G~Y~C~a~n~~g~~~~~~~l~V 407 (808)
.| |.|+|.|.|..+.......|.+
T Consensus 212 ~~-~~ytC~v~h~~~~~~~~~~l~~ 235 (239)
T 3tv3_H 212 GT-QTYICNVNHKPSNTKVDKRVEP 235 (239)
T ss_dssp TT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CC-CEEEEEEEECCCCceEEEEecc
Confidence 88 9999999999877766665554
No 409
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=1.3e-14 Score=141.87 Aligned_cols=169 Identities=17% Similarity=0.188 Sum_probs=111.4
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCC--E---Eee-------ccCcEEEEee---CCeEEEEEcccCc
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNG--R---PVT-------IGHRFRPIHD---FGYVALDIIDTIP 117 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g--~---~l~-------~~~r~~~~~~---~~~~~L~I~~~~~ 117 (808)
...|..+ .+.+|++++|.|.+.+ .+ ..+.|||.. . .|. ...|+.+..+ .+.++|.|.+++.
T Consensus 5 ~q~p~~v-~v~~G~~v~L~C~~~~--~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~ 80 (207)
T 1ypz_E 5 EQSPSAL-SLHEGTDSALRCNFTT--TM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQL 80 (207)
T ss_dssp EESCSEE-EEETTCCEEEEEEESS--CC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCG
T ss_pred EECCCeE-EEccCCcEEEEEEEeC--CC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCH
Confidence 3456677 8999999999999984 33 379999842 2 221 3568887765 6778999999999
Q ss_pred CCCeeEEEEEEecCc---------c--eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeE
Q psy2145 118 EDSGTYTCRAVNLVG---------F--AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIF 186 (808)
Q Consensus 118 ~D~G~Y~C~a~n~~g---------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 186 (808)
+|+|.|.|.+.+..+ . ....+.|.|..... ...+|.+
T Consensus 81 ~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~--------------------------------~~~~P~v 128 (207)
T 1ypz_E 81 EDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ--------------------------------PPAKPSV 128 (207)
T ss_dssp GGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC--------------------------------CCCCCEE
T ss_pred HHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCC--------------------------------CCCCCeE
Confidence 999999999998642 1 11335777753211 0224444
Q ss_pred EeecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 187 TTSLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 187 ~~~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
.... + .++|.|.+.+ ..|. +.|.|+++ ..+...........+|.+++. .....+|.|.|+|.|.|..+
T Consensus 129 ~~~~-------~-~~~l~C~~~g-~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 129 FIMK-------N-GTNVACLVKD-FYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp EEEE-------E-TTEEEEEEEE-ESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETTE
T ss_pred EEeC-------C-CCeEEEEEee-EeCCCeEEEEecC-CcccCCccceEEcCCCcEEEE-EeecccCCCcEEEEEEECCc
Confidence 3321 1 2699999964 3444 79999999 777544322222334544443 23334778999999999877
Q ss_pred eEE
Q psy2145 266 QAV 268 (808)
Q Consensus 266 ~~~ 268 (808)
...
T Consensus 198 ~~~ 200 (207)
T 1ypz_E 198 TVH 200 (207)
T ss_dssp EEE
T ss_pred cEe
Confidence 544
No 410
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.60 E-value=2.6e-16 Score=155.09 Aligned_cols=174 Identities=13% Similarity=0.137 Sum_probs=110.1
Q ss_pred eeecCCCcccccCCCceEEEEEEeeCCCCC---cEEEEEECCEecCCCCC-eEE-Eee---CcEEEEEECCCCCCCCEEE
Q psy2145 506 FTKPLQNIDAVEEGKNAHFSCRLIPVGDPT---LKVEWFRNEKPLEDSSR-ITT-KHD---FGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 506 f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~---~~v~W~k~g~~l~~~~~-~~~-~~~---~~~~~L~I~~v~~~D~G~Y 577 (808)
|+.++... .+.+|+.++|.|.+ .|.++ +.|.| ++..+..... ... ... .+...|.|.++..+|+|.|
T Consensus 7 ~~~~P~~~-~v~~G~~v~L~C~~--~g~~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y 81 (214)
T 1ow0_A 7 SLHRPALE-DLLLGSEANLTCTL--TGLRDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTF 81 (214)
T ss_dssp EEECCCHH-HHHHCSSCCCEEEE--TTCCSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEE
T ss_pred EEECcChH-HhccCCCcEEEEEE--eeeECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeE
Confidence 34434444 57899999999999 67654 68999 5544432100 000 000 0234799999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCceEEEE
Q psy2145 578 ICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQSAHYD 657 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~v~l~ 657 (808)
+|.|.|..+.......|.+.. ...+|.+.........+.+|+.++|.
T Consensus 82 ~C~~~~~~~~~~~~~~i~~~~---------------------------------~~~~P~v~~~~~~~~~~~~g~~~~L~ 128 (214)
T 1ow0_A 82 TCTAAYPESKTPLTATLSKSG---------------------------------NTFRPEVHLLPPPSEELALNELVTLT 128 (214)
T ss_dssp EEEECCSSCSSCEEEEEECCS---------------------------------SCCCCEEEEECCCTTTTTSSSEEEEE
T ss_pred EEEEecCCCCCceeEeeccCC---------------------------------CCCCCEEEecCCCHHHhccCCceEEE
Confidence 999999877543333332100 01246655444333457889999999
Q ss_pred EEEeeCCC-CC-eEEEEEECCEEccCCCcE----EEE---EeCCE---EEEEEccCCCCCcEEEEEEEEeCCcc
Q psy2145 658 CRVVPVGD-PT-MRFEWFVNGVELKMGSRF----HVQ---HDFGY---VTLDITKCVPADSGVYMCKAINRAGE 719 (808)
Q Consensus 658 C~v~~~g~-P~-p~i~W~~~g~~l~~~~~~----~~~---~~~~~---~~L~I~~v~~~D~G~Y~C~A~N~~G~ 719 (808)
|.+ .|. |. +.|.|+|||..|..+... ... .++.+ +.|.|.....+|.|.|+|.|.|..-.
T Consensus 129 C~~--~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l~ 200 (214)
T 1ow0_A 129 CLA--RGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALP 200 (214)
T ss_dssp EEE--EEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTCT
T ss_pred EEE--eeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCCC
Confidence 999 574 54 599999999998765211 122 22222 24455544445689999999998643
No 411
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.60 E-value=3.6e-15 Score=127.46 Aligned_cols=85 Identities=19% Similarity=0.201 Sum_probs=72.3
Q ss_pred ccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEE--EEeCC---EEEEEEccCCCCCcEEEEEEEEeCCcceEE
Q psy2145 648 IMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHV--QHDFG---YVTLDITKCVPADSGVYMCKAINRAGEAVS 722 (808)
Q Consensus 648 v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~--~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 722 (808)
...|..+.|.|.+ .|.|.|.|.|+|||+.|..+.++.+ ...+. ..+|.|.++..+|+|.|+|.|+|.+|.++.
T Consensus 13 ~~~~~~~~~~c~v--~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~ 90 (103)
T 1wwb_X 13 PTSDHHWCIPFTV--KGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEK 90 (103)
T ss_dssp CCCCCEEEEEEEE--ECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEE
T ss_pred ceECcEEEEEEEE--EEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeE
Confidence 3568899999999 7999999999999999998876433 22221 346999999999999999999999999999
Q ss_pred EEEEEEEeCCCc
Q psy2145 723 STSLKVKSKSDI 734 (808)
Q Consensus 723 s~~l~V~~~p~~ 734 (808)
++.|.|..+|.+
T Consensus 91 ~~~l~V~~~P~~ 102 (103)
T 1wwb_X 91 QISAHFMGWPGI 102 (103)
T ss_dssp EEEECCSCCCCC
T ss_pred EEEEEECCCCCC
Confidence 999999988753
No 412
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=2.5e-15 Score=130.50 Aligned_cols=97 Identities=28% Similarity=0.513 Sum_probs=84.0
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccC-CCcEEEEEe-CCEEEEEEccCCCCCcEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKM-GSRFHVQHD-FGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+.. ..++.+..+ .+..+|.|.++..+|+|.|+|.
T Consensus 8 ~P~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 8 APFFEMKLK-HYKIFEGMPVTFTCRV--AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CCCBSSCCC-CEEEETTCCEEEEEEB--CCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCEEEecCc-CeEEeCCCeEEEEEEE--EecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 466666554 3578999999999999 7999999999999999986 567777665 5667999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCCCc
Q psy2145 713 AINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
|.|.+|..+.++.|.|..+|..
T Consensus 85 a~N~~g~~~~~~~l~V~~~~~~ 106 (110)
T 2dm2_A 85 AANPQGRISCTGRLMVQAVNSG 106 (110)
T ss_dssp EECTTCCEEECCCEEEECCSCC
T ss_pred EEECCCeEEEEEEEEEECCCCC
Confidence 9999999999999999987654
No 413
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.59 E-value=2.9e-15 Score=171.73 Aligned_cols=164 Identities=16% Similarity=0.220 Sum_probs=117.1
Q ss_pred ccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEee------------ccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEE
Q psy2145 61 NLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVT------------IGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAV 128 (808)
Q Consensus 61 ~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~------------~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 128 (808)
.+.+|++++|.|.+.. +.|.+.|.|+|++..+. ...|+.+..++ +|.|.+++.+|+|.|+|.+.
T Consensus 377 ~~~~G~~v~L~C~~~~-~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~---~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 377 TARIGEPLVLKCKGAP-KKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNG---SLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEETTSCEEECCTTCC-SSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTS---CEEESSCCGGGCEEEEEEEE
T ss_pred ceecCCcEEEeeeecC-CCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCc---eEEEeccccccCeEEEEEEE
Confidence 7889999999999933 57888999999876321 13344443333 69999999999999999999
Q ss_pred ecCcce-EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCe-EEEEEE
Q psy2145 129 NLVGFA-EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQR-AHFECR 206 (808)
Q Consensus 129 n~~g~~-~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~-v~L~C~ 206 (808)
|..|.. ...+.|.|...+ ..|.+.... ..+.+|+. +.|.|.
T Consensus 453 n~~~~~~~~~~~l~V~~~~-----------------------------------~~p~i~~~~--~~~~~~~~~~~l~C~ 495 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIP-----------------------------------GKPEIVDSA--SELTAGVPNKVGTCV 495 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCC-----------------------------------CCCEEESCC--SEECTTSCEEEEEEE
T ss_pred cCCCceeEEEEEEEEEcCC-----------------------------------CCCEEEcCC--cccccCCceeEEEEE
Confidence 998887 777888886432 234443332 23555555 567999
Q ss_pred EeecCCCCeEEEEeeCCEEccCCC-ceEEE----e--cCc----eEEEEEccCCC-CCcEEEEEEEEeCcee
Q psy2145 207 LIPVSDNTMKVEWFHNNVPIKSGS-RFTET----N--NFG----FVALDIMQCLP-EDSGVYTCRAVNALGQ 266 (808)
Q Consensus 207 ~~~~~~p~~~v~W~~~g~~l~~~~-~~~~~----~--~~~----~~~L~I~~~~~-~D~G~Y~C~a~n~~g~ 266 (808)
+.+ +.|.+.|+|++||.+|.... ++.+. . +.| ..+|.|..++. ++.|.|+|+|+|..+.
T Consensus 496 ~~~-~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 496 SEG-SYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp EEE-EBSCCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCC-CCCCCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 952 36889999999999987533 22221 1 222 23699999984 4588999999998643
No 414
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.58 E-value=1.2e-14 Score=123.52 Aligned_cols=94 Identities=29% Similarity=0.479 Sum_probs=83.4
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEE-eeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTK-HDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|||..+..+.++... ..++..+|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 4 EAPKIFERIQSQ-TVGQGSDAHFRVRV--VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp EEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCceEecCcce-EEcCCCcEEEEEEE--EEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence 478898888776 68999999999999 79999999999999999887776554 356677899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEe
Q psy2145 581 ATNALGEAVTTASMKIKT 598 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~ 598 (808)
|.|..|....++.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 81 AINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCcEEEEEEEEEec
Confidence 999999999999999874
No 415
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.58 E-value=1.2e-14 Score=123.35 Aligned_cols=95 Identities=22% Similarity=0.500 Sum_probs=86.8
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..+.++.+..+++..+|.|.++..+|+|.|+|.
T Consensus 4 ~~~P~i~~~~~~~-~v~~G~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 4 SSKPVIVTGLQDT-TVSSDSVAKFAVKA--TGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp CEEEEEEECCCCE-EEESSSCEEEEEEE--EEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEecCccE-EEeCCCcEEEEEEE--EecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEE
Confidence 3578888888776 68999999999999 78999999999999999988999988888888999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEe
Q psy2145 581 ATNALGEAVTTASMKIKT 598 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~ 598 (808)
|.|..|....++.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 81 VKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEeCCCcEeEEEEEEEEe
Confidence 999999999999998864
No 416
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.58 E-value=1.2e-15 Score=131.32 Aligned_cols=94 Identities=21% Similarity=0.354 Sum_probs=85.1
Q ss_pred cCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 633 YEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 633 ~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
..+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++.+.......+|.|.++..+|+|.|+|.
T Consensus 12 ~~~~~i~~~p~~-~~v~~G~~v~L~C~~--~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 12 TLAARILTKPRS-MTVYEGESARFSCDT--DGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp SCCCEEEECCCC-EEESSSSCEECCEEE--ECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEEC
T ss_pred CCCCEEEECCCC-EEEeCCCcEEEEEEE--EEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEE
Confidence 356778777654 689999999999999 79999999999999999999999988877788999999999999999999
Q ss_pred EEeCCcceEEEEEEEEE
Q psy2145 713 AINRAGEAVSSTSLKVK 729 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~ 729 (808)
|.|..|..+.++.|.|+
T Consensus 89 a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCCEEEEEEEC
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999999999999885
No 417
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.58 E-value=1.2e-14 Score=121.21 Aligned_cols=90 Identities=20% Similarity=0.242 Sum_probs=79.3
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.++.+.+|++++|.|.+ .+ +.+.|.|+|||.+|..+.++.+..+++.++|.|.+++.+|+|.|+|.|
T Consensus 3 ~~~~~~~~~~~~~~v~~G~~v~l~C~v--~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 3 MALIEVEKPLYGVEVFVGETAHFEIEL--SE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCCEEECCCCEEEETTSCEEEEEEE--SS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEeeccCcceEEeCCCCEEEEEEE--CC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence 468999999999999999999999999 34 457899999999999888998888888889999999999999999999
Q ss_pred EeCceeEEEEEEEEEee
Q psy2145 261 VNALGQAVTSGNLLVHS 277 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~~ 277 (808)
.|. ..++.|.|..
T Consensus 80 ~n~----~~sa~L~V~~ 92 (93)
T 1waa_A 80 ANT----KSAANLKVKE 92 (93)
T ss_dssp TTE----EEEEEEEEEC
T ss_pred CCC----cEEEEEEEEc
Confidence 873 4678888863
No 418
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=4.4e-15 Score=125.92 Aligned_cols=92 Identities=18% Similarity=0.354 Sum_probs=82.8
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|..++.+. .+.+|+.+.|.|.+ .|.+.++|+|||..|..+.++.+..+++...|.|.++..+|+|.|+|.|
T Consensus 6 ~p~~~~~~~~~~-~v~~G~~v~l~C~v----~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 6 SGLKILTPLTDQ-TVNLGKEICLKCEI----SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp CCCCCSBCCCCE-EEETTSCCCEEEEC----SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCEEeccCCce-EEcCCCCEEEEEEe----CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence 478899999887 68999999999985 7888999999999999999999988888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEEecc
Q psy2145 582 TNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~ 600 (808)
.|. ..+.++.|.|..+|
T Consensus 81 ~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 81 DAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp SSS--CCCEEEEEEEECCS
T ss_pred cCC--CeeEEEEEEEeCCC
Confidence 998 56778899998754
No 419
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.58 E-value=1.3e-14 Score=146.14 Aligned_cols=186 Identities=10% Similarity=0.089 Sum_probs=116.0
Q ss_pred eecCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEE---c--------------cCCCceEEEec--CceEEEEEc
Q psy2145 188 TSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVP---I--------------KSGSRFTETNN--FGFVALDIM 246 (808)
Q Consensus 188 ~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~I~ 246 (808)
..+..+.+.+|++|+|.|.+.+...+...+.|||. +.. + ....|+....+ .+.++|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 35567889999999999999532234578999983 211 1 01245655432 456789999
Q ss_pred cCCCCCcEEEEEEEEeCc----------------------eeEEEEEEEEEeeCCcccccccccchhhhhhhhhcccccc
Q psy2145 247 QCLPEDSGVYTCRAVNAL----------------------GQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQR 304 (808)
Q Consensus 247 ~~~~~D~G~Y~C~a~n~~----------------------g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~ 304 (808)
+++.+|+|.|.|.+.+.. ......+.|.|...
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~-------------------------- 137 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSA-------------------------- 137 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSC--------------------------
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEccc--------------------------
Confidence 999999999999998742 11122356666521
Q ss_pred ccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecCCC-ccEEEEEECCEeccCCC-cEEEEeeCc---EEEEEEcc
Q psy2145 305 TSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVGDS-KLKVTWLRNGVPIQASN-RVSTMHDFG---YVALNFKY 379 (808)
Q Consensus 305 ~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g~p-~~~v~W~~~g~~l~~~~-~~~~~~~~~---~~~L~I~~ 379 (808)
...+|.+........+..|+.++|.|.+.. ..| .+.+.|+++|..+.... ......++. .+.|.|..
T Consensus 138 -------~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~-~~P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~ 209 (248)
T 3u2s_H 138 -------STKGPSVFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPS 209 (248)
T ss_dssp -------CCBCCEEEEECCC------CEEEEEEEEEE-EBSSCCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEG
T ss_pred -------CCCCCEEEEeCCCccccCCCcEEEEEEEee-EECCCeEEEEeECCccCceeecCceECCCCCEEEEEEEEECh
Confidence 113455543333334557999999999942 245 57899999986432110 000111111 23688888
Q ss_pred CCCCCCeEEEEEEEcCCcceEEEEEEEEE
Q psy2145 380 TYPEDSGTYTCRAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 380 v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 408 (808)
....| |.|+|.|.|..+.......|.+.
T Consensus 210 ~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 210 SSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp GGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred hhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 88888 99999999998877666555543
No 420
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=155.44 Aligned_cols=170 Identities=16% Similarity=0.235 Sum_probs=115.6
Q ss_pred cCCCCcEEEEEEEeeCC-CC-CceEEEEeCCEEeeccCcE--EEEeeC---CeEEEEEcccCcCCCeeEEEEEEecCcce
Q psy2145 62 LRERGHAHFECKLEPVT-DS-NLKVEWFKNGRPVTIGHRF--RPIHDF---GYVALDIIDTIPEDSGTYTCRAVNLVGFA 134 (808)
Q Consensus 62 v~~G~~v~l~C~~~~~~-~p-~~~v~W~~~g~~l~~~~r~--~~~~~~---~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~ 134 (808)
+.+|++++|.|.+.++. .| ...|.|||++..+...... ....++ ...+|.|.++..+|+|.|+|+|.|..+..
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 78999999999998631 13 3479999999766422110 011111 23479999999999999999999887644
Q ss_pred EEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCC
Q psy2145 135 EVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNT 214 (808)
Q Consensus 135 ~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~ 214 (808)
.....+.+.. ....+|.+.+.+......+|+.++|.|.+.+...+.
T Consensus 260 ~~~~~v~~~~----------------------------------~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~ 305 (376)
T 2aty_A 260 PIEKTISKTK----------------------------------GRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPED 305 (376)
T ss_pred ceEEEEcCCC----------------------------------CCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCC
Confidence 3333332210 115678888887776667799999999996433346
Q ss_pred eEEEEeeCCEEccCCCceE--EEecCce---EEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 215 MKVEWFHNNVPIKSGSRFT--ETNNFGF---VALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 215 ~~v~W~~~g~~l~~~~~~~--~~~~~~~---~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
+.|+|+|||.++....... ...++.+ ..|.|.....+|.|.|+|+|.|..-
T Consensus 306 i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 306 ITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred cEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 7999999999885432221 1222222 3577887777889999999998643
No 421
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.57 E-value=1.2e-14 Score=123.55 Aligned_cols=92 Identities=24% Similarity=0.463 Sum_probs=83.8
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.+...+.+|+.+.|.|.+ . .|.+.|.|||||..+..+.++.+..++....|.|.++..+|+|.|+|.|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~--~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVEL--A-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEE--S-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEe--c-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE-
Confidence 58888887765678999999999999 5 6999999999999999999999998888889999999999999999999
Q ss_pred eCCcceEEEEEEEEEeCCC
Q psy2145 715 NRAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~ 733 (808)
|....++.|.|..+|.
T Consensus 83 ---g~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 83 ---GDEKCSTELFVRSGPS 98 (100)
T ss_dssp ---TTEEEEEEEEECCSCC
T ss_pred ---CCceEEEEEEEecCCC
Confidence 8889999999998764
No 422
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.57 E-value=1.2e-14 Score=121.75 Aligned_cols=90 Identities=17% Similarity=0.321 Sum_probs=77.4
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECC--EecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
+|.|..++.+. .+.+|+.+.|.|.+ .|.|.|.|.|+|+| ..+.... ......+...|.|.++..+|+|.|+|.
T Consensus 2 ~P~i~~~~~~~-~v~~G~~~~l~C~~--~g~P~p~i~W~k~~~~~~~~~~~--~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 76 (93)
T 1wit_A 2 KPKILTASRKI-KIKAGFTHNLEVDF--IGAPDPTATWTVGDSGAALAPEL--LVDAKSSTTSIFFPSAKRADSGNYKLK 76 (93)
T ss_dssp CCEECCCCCEE-EECTTBCCEEEEEE--ECCSSCEEEEECSTTTCBCSTTS--EEEEETTEEEEECTTBCGGGCEEEEEE
T ss_pred CCeEEcCCCce-EEeCCCEEEEEEEE--EEcCCCEEEEEECCCCcccCCcE--EEEecCCEEEEEECCCChhcCEEEEEE
Confidence 68887777665 68999999999999 79999999999999 8886653 333445566899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKIK 597 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~ 597 (808)
|.|..|..+.++.|.|+
T Consensus 77 a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 77 VKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEcCCCeEEEEEEEEEC
Confidence 99999999999988874
No 423
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.57 E-value=1.3e-14 Score=134.46 Aligned_cols=99 Identities=32% Similarity=0.584 Sum_probs=85.3
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEe-CCEEEEEEccCCCCCcEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHD-FGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+|.|...+.. ..+.+|+.++|.|.+ .|.|.|.|.|+|||..+..+.++.+... .+..+|.|.++..+|+|.|+|.
T Consensus 40 ~~P~~~~~~~~-~~v~~G~~v~L~C~~--~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 116 (154)
T 1fhg_A 40 VKPYFTKTILD-MEVVEGSAARFDCKV--EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCK 116 (154)
T ss_dssp EEEEEEECCCC-EEEETTSCEEEEEEE--EEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEccCCc-EEEeCCCeEEEEEEE--EEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEEEEE
Confidence 45777776654 679999999999999 7999999999999999999888887654 4567999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCCCcc
Q psy2145 713 AINRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p~~~ 735 (808)
|.|.+|....++.|.|..+|.+.
T Consensus 117 a~N~~G~~~~~~~l~V~~~p~~~ 139 (154)
T 1fhg_A 117 AVNSLGEATCTAELLVETMGKEG 139 (154)
T ss_dssp EEETTEEEEEEEEEEEECC----
T ss_pred EEECCCeEEEEEEEEEeCcCcCC
Confidence 99999999999999999887654
No 424
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=1.1e-14 Score=125.63 Aligned_cols=97 Identities=27% Similarity=0.483 Sum_probs=87.6
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
...+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+..+.++.+..+++...|.|.+++.+|+|.|+|
T Consensus 10 ~~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 86 (107)
T 3irg_B 10 QGSPPCFLRFPRPV-RVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVC 86 (107)
T ss_dssp CCEEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCCeeEcCCccE-EEeCCCeEEEEEEE--eecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEE
Confidence 44588998888776 68999999999999 7899999999999999998888888888888899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEec
Q psy2145 580 KATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~ 599 (808)
.|.|..|....++.|.|..+
T Consensus 87 ~a~n~~g~~~~~~~l~V~~~ 106 (107)
T 3irg_B 87 RARNAAGEAYAAAAVTVLEP 106 (107)
T ss_dssp EEEETTEEEEEEEEEEEEC-
T ss_pred EEEcCCCcEEEEEEEEEEcC
Confidence 99999999999999999864
No 425
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.57 E-value=3.8e-14 Score=141.18 Aligned_cols=173 Identities=18% Similarity=0.327 Sum_probs=117.9
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--E---ec--------------CCCCCeEEEeeC--cEEEEEECCCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--K---PL--------------EDSSRITTKHDF--GYVAMDLSHVRAED 573 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~---~l--------------~~~~~~~~~~~~--~~~~L~I~~v~~~D 573 (808)
.+.+|++|+|.|.+.....+...+.|||.. . .+ ....|+.+..+. +.++|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (230)
T 3n9g_H 11 VRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSED 90 (230)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhh
Confidence 588999999999984212345679999732 1 11 012567665543 56789999999999
Q ss_pred CEEEEEEEEeCC-----eeE---EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCC
Q psy2145 574 EGIYICKATNAL-----GEA---VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGT 645 (808)
Q Consensus 574 ~G~Y~C~a~N~~-----G~~---~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~ 645 (808)
+|.|.|.+.+.. +.. .....|.|...+. .+|.+......
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~--------------------------------~~P~v~~~~~~- 137 (230)
T 3n9g_H 91 TAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAST--------------------------------KGPSVFPLAPS- 137 (230)
T ss_dssp CEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCC--------------------------------BCCEEEEECCC-
T ss_pred CEEEEEEEccCCCCcccccccccCCCEEEEEEecCC--------------------------------CCCEEEecCCC-
Confidence 999999999864 111 1224566643211 23555433332
Q ss_pred ccccCCceEEEEEEEeeCC-CC-CeEEEEEECCEEccC-----------CCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVG-DP-TMRFEWFVNGVELKM-----------GSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g-~P-~p~i~W~~~g~~l~~-----------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
..+.+|+.++|.|.+. | .| .+.|.| ||..+.. +..|.+ .+.|.|.....+| |.|+|.
T Consensus 138 ~~~~~g~~v~L~C~~~--~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~ 207 (230)
T 3n9g_H 138 SKSTSGGTAALGCLVK--DYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICN 207 (230)
T ss_dssp CCCCTTCEEEEEEEEE--EEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE-----EEEEEEESTTBTT-BCCEEE
T ss_pred ccccCCCCEEEEEEEE--eEECCCEEEEE--CCcccCCCeEeCCceECCCCCEEE-----EEEEEECHHHcCC-CeEEEE
Confidence 3467899999999994 4 45 568999 7766542 122222 2479999999999 999999
Q ss_pred EEeCCcceEEEEEEEEEe
Q psy2145 713 AINRAGEAVSSTSLKVKS 730 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~ 730 (808)
|.|..+.......|.|..
T Consensus 208 v~h~~~~~~~~~~~~v~~ 225 (230)
T 3n9g_H 208 VNHKPSNTKVDKRVEPKS 225 (230)
T ss_dssp EEEGGGTEEEEEECCCCT
T ss_pred EEECCCCcceEEEccCCC
Confidence 999999888887777653
No 426
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=4.4e-15 Score=133.61 Aligned_cols=84 Identities=23% Similarity=0.315 Sum_probs=75.4
Q ss_pred CCccccCCceEEEEEEEeeCCCCCeEEEEEECC----------------------------EEc-cCCCcEEEEEeCCEE
Q psy2145 644 GTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNG----------------------------VEL-KMGSRFHVQHDFGYV 694 (808)
Q Consensus 644 ~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g----------------------------~~l-~~~~~~~~~~~~~~~ 694 (808)
....+.+|+.++|.|.+ .|.|.|.|.|+|+| ..| ..+.++.+...+..+
T Consensus 26 ~~~~v~~G~~v~L~C~~--~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 26 DTIVVVAGNKLRLDVPI--SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CEEEESSSSCCCCEEEC--CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCEEEeCCCeEEEEEEE--EEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 34578999999999999 89999999999999 565 356788888888888
Q ss_pred EEEEccCCCCCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 695 TLDITKCVPADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 695 ~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
+|.|.++..+|+|.|+|.|.|.+|.++.++.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 99999999999999999999999999999999885
No 427
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.56 E-value=1.4e-14 Score=123.12 Aligned_cols=92 Identities=25% Similarity=0.442 Sum_probs=80.1
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEcc--CCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELK--MGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
|.|...+ ....+.+|+.+.|.|.+ .|.|.|.|.|+|+|..+. .+.++.+..+++..+|.|.++..+|+|.|+|.|
T Consensus 6 P~i~~~~-~~~~~~~G~~~~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 6 PKIEALP-SDISIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEECCCC-SEEEEETTSEEEEEEEE--EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CeeecCC-CcEEEcCCCcEEEEEEE--EEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEE
Confidence 5554443 33578899999999999 799999999999999997 456888888777889999999999999999999
Q ss_pred EeCCcceEEEEEEEEEe
Q psy2145 714 INRAGEAVSSTSLKVKS 730 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~~ 730 (808)
.|..|..+.++.|.|++
T Consensus 83 ~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 83 GNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEEe
Confidence 99999999999999874
No 428
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.55 E-value=3.2e-14 Score=152.89 Aligned_cols=179 Identities=13% Similarity=0.223 Sum_probs=115.7
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCC---CC-cEEEEEECCEecCCCCC-eEEEeeC----cEEEEEECCCCCCC
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD---PT-LKVEWFRNEKPLEDSSR-ITTKHDF----GYVAMDLSHVRAED 573 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~---P~-~~v~W~k~g~~l~~~~~-~~~~~~~----~~~~L~I~~v~~~D 573 (808)
+.+|+.++.....+.+|+.++|.|.+ .|. |. ..|+|+|++..+..... ......+ ....|.|.++..+|
T Consensus 167 p~v~~~~p~~~~~~~~g~~v~L~C~~--~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D 244 (376)
T 2aty_A 167 SSVFIFPPKPKDVLTITLTPKVTCVV--VDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLN 244 (376)
T ss_pred cEEEEeCcCHHHceeeCCeeEEEEEE--eccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccC
Confidence 33445555433237889999999999 566 32 46999999976542210 0000111 22369999999999
Q ss_pred CEEEEEEEEeCCeeEEEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCCCccccCCce
Q psy2145 574 EGIYICKATNALGEAVTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTGTSEIMEGQS 653 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~~~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~~~~v~~G~~ 653 (808)
+|.|+|.|.|..+.......+.+.. ....+|.+...... ....+|+.
T Consensus 245 ~g~Y~C~~~~~~~~~~~~~~v~~~~--------------------------------~~~~~P~v~v~~~~-~~~~~g~~ 291 (376)
T 2aty_A 245 GKEFKCRVNSAAFPAPIEKTISKTK--------------------------------GRPKAPQLYTIPPP-KEQMAKDK 291 (376)
T ss_pred CCEEEEEEecCCCCCceEEEEcCCC--------------------------------CCCcCCeEEeeCCC-HHHhcCCc
Confidence 9999999999877543333332210 01124665554443 34556999
Q ss_pred EEEEEEEeeCCC--CCeEEEEEECCEEccCCCcEEE--EEeCC---EEEEEEccCCCCCcEEEEEEEEeCCc
Q psy2145 654 AHYDCRVVPVGD--PTMRFEWFVNGVELKMGSRFHV--QHDFG---YVTLDITKCVPADSGVYMCKAINRAG 718 (808)
Q Consensus 654 v~l~C~v~~~g~--P~p~i~W~~~g~~l~~~~~~~~--~~~~~---~~~L~I~~v~~~D~G~Y~C~A~N~~G 718 (808)
++|.|.+ .|. |.+.|+|+|||+++........ ..++. .+.|.|.....+|.|.|+|.|.|..-
T Consensus 292 ~~L~C~~--~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 292 VSLTCMI--TDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred eEEEEEE--EEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 9999999 575 3579999999998854322221 22222 24677777777789999999999864
No 429
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=3.3e-14 Score=125.08 Aligned_cols=98 Identities=18% Similarity=0.284 Sum_probs=83.2
Q ss_pred ccCCCeeeec--CCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEE
Q psy2145 500 TKQRPVFTKP--LQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 500 ~~~~P~f~~~--~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 577 (808)
...+|.|..+ +.....+.+|+.+.|.|.+ .|.|.|.|.|+|+|..+. ..++.+....+...|.|.++..+|+|.|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~--~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 94 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPF--QGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEY 94 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEE--EEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEE--ccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEE
Confidence 3457888654 3334478999999999999 799999999999999997 5666676667777899999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEecc
Q psy2145 578 ICKATNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~ 600 (808)
+|.|.|..|..+.++.|.|...|
T Consensus 95 ~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 95 ELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEEeCCCeEEEEEEEEEEcCC
Confidence 99999999999999999998754
No 430
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=8.3e-15 Score=124.65 Aligned_cols=93 Identities=28% Similarity=0.459 Sum_probs=78.5
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccC-CCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKM-GSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+|.|...+.. ..+.+|+.+.|.|.+ .|.|.|.|.|+|||..+.. +.++.+.. ++ +|.|.++..+|+|.|+|.
T Consensus 7 ~~P~i~~~p~~-~~v~~G~~~~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~-~~--~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 7 GPPIILQGPAN-QTLAVDGTALLKCKA--TGDPLPVISWLKEGFTFPGRDPRATIQE-QG--TLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp SSCEEEECCCC-EEEESSSEEEECCEE--ECSSCCEEEEEESSSEESSSCSSCEECT-TC--CEEEESCCTTTCCEEEEE
T ss_pred CCCEEEeCcCC-EEEcCCCcEEEEEEE--EEcCCCEEEEEECCEECCCCCCCEEEcC-CC--EEEEccCCcccCEEEEEE
Confidence 35777766543 678999999999999 7999999999999999874 45555433 22 799999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCC
Q psy2145 713 AINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p 732 (808)
|.|..|..+.++.|.|..+|
T Consensus 81 a~n~~g~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTESG 100 (100)
T ss_dssp EECSSCCCBCCEEEEEESCC
T ss_pred EEcCCCCEEEEEEEEEecCC
Confidence 99999999999999998764
No 431
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=118.04 Aligned_cols=80 Identities=16% Similarity=0.234 Sum_probs=71.1
Q ss_pred CCCccccCCCCcEEEEEEEeeCCCCCceEEEEeCCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcceE
Q psy2145 56 PKSIENLRERGHAHFECKLEPVTDSNLKVEWFKNGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAE 135 (808)
Q Consensus 56 p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~ 135 (808)
+.++ .+.+|+++.|.|.+. + |.+.|.|||||.+|..+.++.+..+++..+|.|.+++.+|+|.|+|.| |...
T Consensus 3 lt~v-~~~~G~~v~l~C~vs--~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a----~n~~ 74 (84)
T 2lu7_A 3 MTRV-RSTPGGDLELVVHLS--G-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDA----PQDS 74 (84)
T ss_dssp CCCE-EECTTSCEEEECCCS--C-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEEC----TTTC
T ss_pred CeEE-EEecCCCEEEEEEEC--C-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEE----CCEE
Confidence 4566 899999999999986 3 777899999999999999999999988889999999999999999998 5567
Q ss_pred EEEEEEEe
Q psy2145 136 VQATLQCR 143 (808)
Q Consensus 136 ~~~~l~V~ 143 (808)
.++.|.|.
T Consensus 75 ~~a~l~V~ 82 (84)
T 2lu7_A 75 RIFLVSVE 82 (84)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEE
Confidence 78888885
No 432
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=3.3e-14 Score=121.82 Aligned_cols=93 Identities=19% Similarity=0.284 Sum_probs=79.9
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC----------cEEEEEeCCEEEEEEccCCCC
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS----------RFHVQHDFGYVTLDITKCVPA 704 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~----------~~~~~~~~~~~~L~I~~v~~~ 704 (808)
+|.|...+.+ ..+.+|+.+.|.|.+ .+ .|.+.|||||++|..+. ++.+..++..++|+|.++..+
T Consensus 8 ~~~~~~~l~d-~~v~eG~~a~f~C~v--s~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~ 82 (112)
T 2e6q_A 8 TARLVAGLED-VQVYDGEDAVFSLDL--ST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQ 82 (112)
T ss_dssp CCCEEECCCC-EEEETTCEEEEEEEE--SS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCST
T ss_pred CcEEecCCCC-eEEcCCCcEEEEEEE--CC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHH
Confidence 4778888776 689999999999999 56 77899999999999988 999988888999999999999
Q ss_pred CcEEEEEEEEeCCcceEEEEEEEEEeCCCcc
Q psy2145 705 DSGVYMCKAINRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 705 D~G~Y~C~A~N~~G~~~~s~~l~V~~~p~~~ 735 (808)
|+|.|+|..- +...+++.|.|..+|...
T Consensus 83 D~G~Y~~~~~---~~~~ssA~L~V~~~p~~~ 110 (112)
T 2e6q_A 83 DSGALVGFSC---PGVQDSAALTIQESSGPS 110 (112)
T ss_dssp TCSEEEEEEE---TTEEEEEEEEEECSSCSC
T ss_pred HCccEEEEEE---CCeeEEEEEEEeCCCccc
Confidence 9999977432 445779999999988643
No 433
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=2e-14 Score=122.96 Aligned_cols=88 Identities=26% Similarity=0.384 Sum_probs=77.0
Q ss_pred EEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC--cEEEEEeCCEEEEEEccCCCCCcEEEEEEEEe
Q psy2145 638 FTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS--RFHVQHDFGYVTLDITKCVPADSGVYMCKAIN 715 (808)
Q Consensus 638 ~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 715 (808)
|...+. ...+.+|+.++|.|.+ .| |.+.|.|+|||..|..+. +|.+..++...+|.|.++..+|+|.|+|.|.|
T Consensus 10 ~~~~~~-~~~v~~G~~v~l~C~~--~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 10 VTKQLE-DTTAYCGERVELECEV--SE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp CSBCCC-CEEEETTEEEEEEEEC--SS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred eeccCC-CEEEECCCCEEEEEEe--cC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 444444 3678899999999999 67 779999999999999888 77998888889999999999999999999988
Q ss_pred CCcceEEEEEEEEEeCCC
Q psy2145 716 RAGEAVSSTSLKVKSKSD 733 (808)
Q Consensus 716 ~~G~~~~s~~l~V~~~p~ 733 (808)
.+.++.|.|..+|.
T Consensus 86 ----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSG 99 (103)
T ss_dssp ----EEEEEEEEEECCCS
T ss_pred ----CcEEEEEEEeCCCC
Confidence 58889999998875
No 434
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.54 E-value=2e-15 Score=148.67 Aligned_cols=174 Identities=13% Similarity=0.104 Sum_probs=111.0
Q ss_pred eecCCCCccccCCCCcEEEEEEEeeCCCC--CceEEEEeCCEEeeccCcEE-E-EeeC---CeEEEEEcccCcCCCeeEE
Q psy2145 52 TVTKPKSIENLRERGHAHFECKLEPVTDS--NLKVEWFKNGRPVTIGHRFR-P-IHDF---GYVALDIIDTIPEDSGTYT 124 (808)
Q Consensus 52 ~~~~p~~~~~v~~G~~v~l~C~~~~~~~p--~~~v~W~~~g~~l~~~~r~~-~-~~~~---~~~~L~I~~~~~~D~G~Y~ 124 (808)
++..|..+ .+.+|++++|.|.+.+. .| .+.|.| ++..+....... . ..++ ...+|.|.++..+|+|.|+
T Consensus 7 ~~~~P~~~-~v~~G~~v~L~C~~~g~-~p~~~~~v~W--~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~ 82 (214)
T 1ow0_A 7 SLHRPALE-DLLLGSEANLTCTLTGL-RDASGVTFTW--TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFT 82 (214)
T ss_dssp EEECCCHH-HHHHCSSCCCEEEETTC-CSCCCCCCCB--SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEE
T ss_pred EEECcChH-HhccCCCcEEEEEEeee-ECCCCeEEEE--cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEE
Confidence 34557776 78999999999999852 33 268999 444433210000 0 0011 3357999999999999999
Q ss_pred EEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeec-CceeecCCCeEEE
Q psy2145 125 CRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSL-KNCEIKEGQRAHF 203 (808)
Q Consensus 125 C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~~v~~G~~v~L 203 (808)
|.|.|..+.......|.+. ....+|.+.+.+ ....+.+|+.++|
T Consensus 83 C~~~~~~~~~~~~~~i~~~-----------------------------------~~~~~P~v~~~~~~~~~~~~g~~~~L 127 (214)
T 1ow0_A 83 CTAAYPESKTPLTATLSKS-----------------------------------GNTFRPEVHLLPPPSEELALNELVTL 127 (214)
T ss_dssp EEECCSSCSSCEEEEEECC-----------------------------------SSCCCCEEEEECCCTTTTTSSSEEEE
T ss_pred EEEecCCCCCceeEeeccC-----------------------------------CCCCCCEEEecCCCHHHhccCCceEE
Confidence 9999987654333333210 014567765544 3345778999999
Q ss_pred EEEEeecCCC-CeEEEEeeCCEEccCCCceE---EEe---cCceE----EEEEccCCCCCcEEEEEEEEeCce
Q psy2145 204 ECRLIPVSDN-TMKVEWFHNNVPIKSGSRFT---ETN---NFGFV----ALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 204 ~C~~~~~~~p-~~~v~W~~~g~~l~~~~~~~---~~~---~~~~~----~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
.|.+.+ ..| .+.|.|+|||..+..+.... ... .+|.+ .|.|.....+|.|.|+|+|.|...
T Consensus 128 ~C~~~g-~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 128 TCLARG-FSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EEEEEE-ESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EEEEee-eECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 999964 234 46999999999986552111 222 33322 345554444568999999999643
No 435
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=5.5e-15 Score=128.28 Aligned_cols=99 Identities=30% Similarity=0.460 Sum_probs=85.0
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEE-eCCEEEEEEccCCCCCcEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQH-DFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+|.|...+. ...+.+|+.++|.|.+ .|.|.|.|.|+|||..+..+.++.+.. ..+..+|.|.++..+|+|.|+|.
T Consensus 8 ~~P~i~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 8 FRPHFLQAPG-DLTVQEGKLCRMDCKV--SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCCEEEECCC-EEEEESSSCBCCEEEE--ECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEE
T ss_pred CCCcEEeCCC-cEEEeCCCEEEEEEEE--EEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEE
Confidence 4688877654 4679999999999999 799999999999999998776655443 44567999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCCCcc
Q psy2145 713 AINRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p~~~ 735 (808)
|.|..|..+.++.|.|..+|..+
T Consensus 85 a~n~~g~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 85 ATNRAGQNSFSLELVVAAKESGP 107 (110)
T ss_dssp EECSSCEEEECCEEEEECCCCSS
T ss_pred EECCCCEEEEEEEEEEeCCCCCC
Confidence 99999999999999999887643
No 436
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.54 E-value=1.3e-14 Score=120.16 Aligned_cols=88 Identities=14% Similarity=0.278 Sum_probs=74.2
Q ss_pred CCCeeeecCCCcc-cccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNID-AVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~-~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.||.|+.|+.+.. .+.+|+.+.|.|.+ .+ |.+.|+|+|||++|..+.++.+..+++..+|.|.++..+|+|.|+|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v--~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~ 79 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEV--DR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCV 79 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEEC--SC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEE--CC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEE
Confidence 4677777777642 45689999999998 55 88899999999999999999999999988999999999999999999
Q ss_pred EEeCCeeEEEEEEEEE
Q psy2145 581 ATNALGEAVTTASMKI 596 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V 596 (808)
|.|. +++++|+|
T Consensus 80 a~n~----~~~~~ltV 91 (91)
T 2lvc_A 80 AGDE----CAYFTVTI 91 (91)
T ss_dssp CSSC----EEEEEEEC
T ss_pred Ecce----EEEEEEEC
Confidence 9775 55566654
No 437
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.54 E-value=5.6e-15 Score=127.76 Aligned_cols=95 Identities=22% Similarity=0.377 Sum_probs=70.4
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|+|..+..+.++.+.... .+|.|.++..+|+|.|+|.|.
T Consensus 10 ~P~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~G~Y~C~a~ 84 (108)
T 3kvq_A 10 APTITGNLE-NQTTSIGESIEVSCTA--SGNPPPQIMWFKDNETLVEDSGIVLKDGN--RNLTIRRVRKEDEGLYTCQAC 84 (108)
T ss_dssp -CCCBSCCC-CEEEETTCCEEEECBC--C----CCEEEEESSSBCCCBTTEEEETTT--TEEEECSCCGGGCEEEEEEEC
T ss_pred CCceecCCC-CeEEeCCCeEEEEEEC--cCcCCCeEEEEECCeEcccCCCeEEeCCC--cEEEEeecCcccCEEEEEEEE
Confidence 455655443 3578899999999999 79999999999999999887777664433 489999999999999999999
Q ss_pred eCCcceEEEEEEEEEeCCCc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~ 734 (808)
|..|....++.|.|.++|..
T Consensus 85 n~~g~~~~~~~l~V~~~~~~ 104 (108)
T 3kvq_A 85 SVLGCAKVEAFFIIEGAQEK 104 (108)
T ss_dssp ----CEEEEEEEEEEC----
T ss_pred eCCCceEEEEEEEEeCCCcc
Confidence 99999999999999988653
No 438
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.54 E-value=2.1e-14 Score=125.19 Aligned_cols=95 Identities=18% Similarity=0.339 Sum_probs=75.3
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCC---CCeEEEEEECCE-Ecc--CCCcEEEEEeC------CEEEEEEccCCC
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGD---PTMRFEWFVNGV-ELK--MGSRFHVQHDF------GYVTLDITKCVP 703 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~---P~p~i~W~~~g~-~l~--~~~~~~~~~~~------~~~~L~I~~v~~ 703 (808)
|.|+..+.+ ..+.+|+.++|.|.+ .|. |.|.|.|||++. ++. .+.++.+.... ...+|.|.++..
T Consensus 8 ~~F~~~P~~-v~V~eG~~v~L~C~v--~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 84 (126)
T 2dav_A 8 ILFIEKPQG-GTVKVGEDITFIAKV--KAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD 84 (126)
T ss_dssp CSCCSCCCC-CEEETTCCEEEEEEE--ECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCT
T ss_pred cEEEEcCCC-eEEeCCCCEEEEEEE--eccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCc
Confidence 556666644 679999999999999 454 899999999752 121 24566664321 247999999999
Q ss_pred CCcEEEEEEEEeCCcceEEEEEEEEEe-CCC
Q psy2145 704 ADSGVYMCKAINRAGEAVSSTSLKVKS-KSD 733 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~G~~~~s~~l~V~~-~p~ 733 (808)
.|+|.|+|+|+|..|..++++.|.|.. ++.
T Consensus 85 ~DaG~Y~Cevsn~~g~~~~~~~L~V~~~~~~ 115 (126)
T 2dav_A 85 NFAGNYRCEVTYKDKFDSCSFDLEVHESTGT 115 (126)
T ss_dssp TSCEEEEEEEECSSCEEEECCEEEEECCCCS
T ss_pred ccCEEEEEEEEeCCCcEEEEEEEEEEecCCC
Confidence 999999999999999999999999998 543
No 439
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.53 E-value=4.4e-14 Score=119.87 Aligned_cols=95 Identities=31% Similarity=0.558 Sum_probs=82.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC-ceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS-RFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~-~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..||.|...+.+..+.+|++++|.|.+ .+.|.+.|.|+|+|..+.... ++....+++..+|.|.+++.+|+|.|+|.
T Consensus 3 ~~~P~~~~~~~~~~v~~G~~v~l~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 3 KAPPTFKVSLMDQSVREGQDVIMSIRV--QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEE--EEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEcCCceEecCCCEEEEEEEE--EEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence 457899999999999999999999999 577888999999999987654 45555566777899999999999999999
Q ss_pred EEeCceeEEEEEEEEEee
Q psy2145 260 AVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~ 277 (808)
|.|..|....++.|.|..
T Consensus 81 a~N~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 81 AVNEYGARQCEARLEVRG 98 (99)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEECCCceeEEEEEEEEC
Confidence 999999999999998864
No 440
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.53 E-value=4.6e-14 Score=123.49 Aligned_cols=99 Identities=25% Similarity=0.444 Sum_probs=86.4
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC-CCCeEEEeeC-cEEEEEECCCCCCCCEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-SSRITTKHDF-GYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-~~~~~~~~~~-~~~~L~I~~v~~~D~G~Y 577 (808)
...+|.|+..+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+.. ..++.+..++ +.++|.|.+++.+|+|.|
T Consensus 12 ~~~~p~f~~~p~~~-~v~~G~~v~L~C~~--~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (116)
T 2kkq_A 12 HKRAPMFIYKPQSK-KVLEGDSVKLECQI--SAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWY 88 (116)
T ss_dssp CCBCCCBSSCCCCE-EEETTEEEEEEEEB--CCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEE
T ss_pred CCCCCeEEeCCCcE-EEeCCCcEEEEEEE--eccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEE
Confidence 34589999988887 69999999999999 8999999999999999875 4677666543 556899999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 578 ICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
+|.|.|..|....++.|.|...|.
T Consensus 89 ~C~a~N~~G~~~~~~~l~V~~~p~ 112 (116)
T 2kkq_A 89 TVSAVNEAGVTTCNTRLDVTARPN 112 (116)
T ss_dssp EEEEEETTEEEEEEEEEEEECCSC
T ss_pred EEEEEcCCCeEEEEEEEEEeCCCC
Confidence 999999999999999999987654
No 441
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=1.8e-14 Score=123.62 Aligned_cols=93 Identities=14% Similarity=0.200 Sum_probs=79.9
Q ss_pred CCeEEeecCCC--ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 635 KPIFTQLLTGT--SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 635 ~P~~~~~~~~~--~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
+|.+...+... ..+.+|+.++|.|.+ .|.|.+ |.|+|||+.+..+.++.+..++....|.|.++..+|+|.|+|.
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~--~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 83 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCEL--SRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECR 83 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEEC--SSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEe--cCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEE
Confidence 45555554443 468899999999999 799999 9999999999999999999888889999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCCCc
Q psy2145 713 AINRAGEAVSSTSLKVKSKSDI 734 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p~~ 734 (808)
|.|..| ++.|.|..+|..
T Consensus 84 a~n~~~----~~~l~V~~~P~p 101 (104)
T 2e6p_A 84 TEGVSA----FFGVTVQDPSGP 101 (104)
T ss_dssp CSSCCC----CEEEEEECCCCS
T ss_pred ECCceE----EEEEEEcCCCCC
Confidence 999854 778888887753
No 442
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.53 E-value=3.2e-14 Score=120.96 Aligned_cols=95 Identities=26% Similarity=0.489 Sum_probs=80.8
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCe-EEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRI-TTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
.+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+....+. ......+...|.|.+++.+|+|.|+|.
T Consensus 4 ~~P~~~~~p~~~-~~~~G~~~~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 4 GPPRFIQVPENM-SIDEGRFCRMDFKV--SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp EEEECCCCCCCE-EEETTCCEEEEEEC--EEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCeEEeCCCCE-EecCCCEEEEEEEE--EeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEE
Confidence 467887777665 68999999999999 78999999999999998876543 233445667899999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEec
Q psy2145 581 ATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~ 599 (808)
|.|..|..+.++.|.|..+
T Consensus 81 a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEcCCCeEEEEEEEEEEec
Confidence 9999999999999999764
No 443
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.53 E-value=2.1e-14 Score=125.19 Aligned_cols=91 Identities=27% Similarity=0.428 Sum_probs=80.3
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEe
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAIN 715 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 715 (808)
|.|...+.. ..+.+|+.+.|.|.+ .|. |.|.|||||..|..+.++.+..++..+.|.|.++..+|+|.|+|.|
T Consensus 20 p~~~~~~~~-~~v~~G~~v~l~C~~--~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 92 (113)
T 2edh_A 20 IKFTEGLRN-EEATEGATAVLRCEL--SKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC-- 92 (113)
T ss_dssp CCEEECCCC-CEECTTSCEEEEEEE--SSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE--
T ss_pred CcccccCCc-eEEeCCCeEEEEEEE--CCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe--
Confidence 567666554 679999999999999 665 6799999999999999999999988899999999999999999999
Q ss_pred CCcceEEEEEEEEEeCCCcc
Q psy2145 716 RAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 716 ~~G~~~~s~~l~V~~~p~~~ 735 (808)
|....++.|.|..+|..+
T Consensus 93 --~~~~~~~~l~V~~~p~~~ 110 (113)
T 2edh_A 93 --GKERTSAMLTVRAMPSGP 110 (113)
T ss_dssp --TTEEEEEEEEECCCCCSS
T ss_pred --CCCCEEEEEEEeCCCCCc
Confidence 888999999999887654
No 444
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.53 E-value=1e-13 Score=117.06 Aligned_cols=89 Identities=22% Similarity=0.457 Sum_probs=79.2
Q ss_pred eecCCCcccccCCCceEEEEEEeeCCC-CCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEEEeCC
Q psy2145 507 TKPLQNIDAVEEGKNAHFSCRLIPVGD-PTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKATNAL 585 (808)
Q Consensus 507 ~~~~~~~~~v~~G~~v~l~C~v~~~g~-P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~ 585 (808)
..++.+. .+.+|+.+.|.|.+ .|. |.+.|.|+|++..+..+.++.+...++...|.|.+++.+|+|.|+|.|.|..
T Consensus 5 ~~~~~~~-~v~~G~~v~l~C~~--~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (97)
T 2bk8_A 5 SGQIMHA-VGEEGGHVKYVCKI--ENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDY 81 (97)
T ss_dssp ECCCCCE-EECTTCCEEEEEEE--ESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred eccCcCE-EEcCCCcEEEEEEE--eccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCC
Confidence 3344444 68999999999999 686 9999999999999999889888778888899999999999999999999999
Q ss_pred eeEEEEEEEEEEe
Q psy2145 586 GEAVTTASMKIKT 598 (808)
Q Consensus 586 G~~~~s~~l~V~~ 598 (808)
|....++.|.|..
T Consensus 82 g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 82 GEDSSYAELFVKG 94 (97)
T ss_dssp CEEEEEEEEEETT
T ss_pred CeEeEEEEEEEEe
Confidence 9999999998864
No 445
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=9e-14 Score=135.79 Aligned_cols=169 Identities=18% Similarity=0.238 Sum_probs=106.6
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCC--E---Ec-------cCCCceEEEec---CceEEEEEccCCC
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNN--V---PI-------KSGSRFTETNN---FGFVALDIMQCLP 250 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g--~---~l-------~~~~~~~~~~~---~~~~~L~I~~~~~ 250 (808)
+...+..+.+.+|++|+|.|.+. +.+ ..+.|||.. . .+ ....|+....+ .+..+|.|.+++.
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~--~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~ 80 (207)
T 1ypz_E 4 VEQSPSALSLHEGTDSALRCNFT--TTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQL 80 (207)
T ss_dssp EEESCSEEEEETTCCEEEEEEES--SCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCG
T ss_pred cEECCCeEEEccCCcEEEEEEEe--CCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCH
Confidence 34456678899999999999994 333 479999842 2 11 12356666654 5677999999999
Q ss_pred CCcEEEEEEEEeCce---------e--EEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeec
Q psy2145 251 EDSGVYTCRAVNALG---------Q--AVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFT 319 (808)
Q Consensus 251 ~D~G~Y~C~a~n~~g---------~--~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~ 319 (808)
+|+|.|.|.+.+..+ . ....+.|.|..... ...+|.+.
T Consensus 81 ~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~-------------------------------~~~~P~v~ 129 (207)
T 1ypz_E 81 EDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ-------------------------------PPAKPSVF 129 (207)
T ss_dssp GGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC-------------------------------CCCCCEEE
T ss_pred HHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCC-------------------------------CCCCCeEE
Confidence 999999999998642 1 11235777764210 00123221
Q ss_pred cCCCceEeecCCeEEEEEEEeecCCCc-cEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCcc
Q psy2145 320 QPMRDIHVAENQAAHFEARLIPVGDSK-LKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELGE 398 (808)
Q Consensus 320 ~~~~~~~v~~G~~~~l~C~~~~~g~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g~ 398 (808)
+..+ .+.|.|.+. ...|. +.|+|+++ ..+...........++...+. .....+|.|.|+|.|.|..+.
T Consensus 130 -------~~~~-~~~l~C~~~-g~~P~~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 130 -------IMKN-GTNVACLVK-DFYPKEVTISLRSS-KKIVEFDPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp -------EEEE-TTEEEEEEE-EESSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETTEE
T ss_pred -------EeCC-CCeEEEEEe-eEeCCCeEEEEecC-CcccCCccceEEcCCCcEEEE-EeecccCCCcEEEEEEECCcc
Confidence 1122 279999983 23454 79999999 666544222222233433332 222336789999999998765
Q ss_pred e
Q psy2145 399 A 399 (808)
Q Consensus 399 ~ 399 (808)
.
T Consensus 199 ~ 199 (207)
T 1ypz_E 199 V 199 (207)
T ss_dssp E
T ss_pred E
Confidence 4
No 446
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.3e-14 Score=124.18 Aligned_cols=93 Identities=25% Similarity=0.365 Sum_probs=80.1
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCC-eEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPT-MRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~-p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
|.|...+. ...+.+|+.++|.|.+ .|.|. +.|.|||||.+|..+.++.+..++..++|.|.++..+|+|.|+|.|
T Consensus 9 ~~~~~~~~-~~~v~~G~~v~l~C~v--~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a- 84 (104)
T 2eny_A 9 VGITKRLK-TMEVLEGESCSFECVL--SHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV- 84 (104)
T ss_dssp CCCSBCCC-CEEEESSCCEEEEEEC--SSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE-
T ss_pred CEEEecCC-CcEEcCCCcEEEEEEE--cCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE-
Confidence 45555554 3679999999999999 78774 5899999999999999999999988999999999999999999997
Q ss_pred eCCcceEEEEEEEEEeCCCcc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~~ 735 (808)
|....++.|.|..+|...
T Consensus 85 ---~~~~~~a~L~V~~~p~~~ 102 (104)
T 2eny_A 85 ---RGLTSKASLIVRERSGPS 102 (104)
T ss_dssp ---TTEEEEECEEEECCCSSC
T ss_pred ---CCeeEEEEEEEeCCCcCC
Confidence 446789999999988643
No 447
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=122.69 Aligned_cols=90 Identities=30% Similarity=0.586 Sum_probs=77.1
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKA 713 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A 713 (808)
.+|.|...+. ...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+...... ...+..+|.|.++..+|+|.|+|.|
T Consensus 10 ~~P~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~C~a 83 (99)
T 2yr3_A 10 VAPSFSSVLK-DCAVIEGQDFVLQCSV--RGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYTCLA 83 (99)
T ss_dssp EEEEEEECCC-CEEECTTCCEEEECEE--EEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEEEEE
T ss_pred cCCceeecCC-CCEEeCCCeEEEEEEE--eeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEEEEE
Confidence 4577777654 4679999999999999 79999999999999998866542 2456679999999999999999999
Q ss_pred EeCCcceEEEEEEEEE
Q psy2145 714 INRAGEAVSSTSLKVK 729 (808)
Q Consensus 714 ~N~~G~~~~s~~l~V~ 729 (808)
.|..|..+.++.|.|+
T Consensus 84 ~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 84 ENALGQVSCSAWVTVH 99 (99)
T ss_dssp ECSSCEEEEECCEEEC
T ss_pred EECCCeEEEEEEEEEC
Confidence 9999999999988874
No 448
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.52 E-value=3.7e-14 Score=122.97 Aligned_cols=99 Identities=25% Similarity=0.504 Sum_probs=85.2
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC-CCCeEEEee-CcEEEEEECCCCCCCCEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-SSRITTKHD-FGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y 577 (808)
...+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+.. ..++.+... .+...|.|.+++.+|+|.|
T Consensus 5 ~~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 81 (110)
T 2dm2_A 5 SSGAPFFEMKLKHY-KIFEGMPVTFTCRV--AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNY 81 (110)
T ss_dssp CSCCCCBSSCCCCE-EEETTCCEEEEEEB--CCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCC
T ss_pred CCCCCEEEecCcCe-EEeCCCeEEEEEEE--EecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEE
Confidence 34588888888776 68999999999999 8999999999999999876 456666654 5666899999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEeccc
Q psy2145 578 ICKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
+|.|.|..|....++.|.|...+.
T Consensus 82 ~C~a~N~~g~~~~~~~l~V~~~~~ 105 (110)
T 2dm2_A 82 TIMAANPQGRISCTGRLMVQAVNS 105 (110)
T ss_dssp EEEEECTTCCEEECCCEEEECCSC
T ss_pred EEEEEECCCeEEEEEEEEEECCCC
Confidence 999999999999999999987543
No 449
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.52 E-value=1.8e-14 Score=121.19 Aligned_cols=86 Identities=22% Similarity=0.409 Sum_probs=73.6
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+. ...+.+|+.+.|.|.+ .|.| |.|.|+|||..+..+.++.+. ++ .|.|.++..+|+|.|+|.|.
T Consensus 9 pp~~~~~~~-~~~v~~G~~v~l~C~~--~g~p-p~i~W~k~g~~~~~~~~~~~~--~~--~L~i~~~~~~D~G~Y~C~a~ 80 (95)
T 2ckn_A 9 PWGVPVEVE-SLLVHPGDLLQLRCRL--RDDV-QSINWLRDGVQLVESNRTRIT--GE--EVEVRDSIPADSGLYACVTS 80 (95)
T ss_dssp SCCBTTBBC-CEEECTTSCEEEECCE--ESSC-CEEEEEBTTBCCCCCSSEEEC--SS--EEEESSCCGGGSEEEEEEEE
T ss_pred CCEEEcCcc-eEEEcCCCeEEEEEEC--CCCC-CceEEEECCEecCCCCCEEEe--CC--EEEECCCChHHCEEEEEEec
Confidence 355554433 3678999999999999 6888 899999999999988887764 22 89999999999999999999
Q ss_pred eCCcceEEEEEEEE
Q psy2145 715 NRAGEAVSSTSLKV 728 (808)
Q Consensus 715 N~~G~~~~s~~l~V 728 (808)
|..|..+.++.|.|
T Consensus 81 n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 81 SPSGSDTTYFSVNV 94 (95)
T ss_dssp ETTEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEE
Confidence 99999999999887
No 450
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.52 E-value=2.6e-14 Score=122.30 Aligned_cols=93 Identities=17% Similarity=0.304 Sum_probs=81.5
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.. ..+.+|+.+.|.|.+ .| |.+.|.|+|||..+..+.++.+..++..+.|.|.++..+|+|.|+|.|.
T Consensus 8 pp~~~~~~~~-~~v~~G~~v~l~C~~--~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (103)
T 2edf_A 8 PAAIIKPLED-QWVAPGEDVELRCEL--SR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVE 83 (103)
T ss_dssp CCCEEECCCC-EEECTTSCEEECCEE--SS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECS
T ss_pred CcEEEecCCc-cEEcCCCCEEEEEEE--eC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEc
Confidence 4666665554 679999999999999 66 8889999999999999999999988888999999999999999999999
Q ss_pred eCCcceEEEEEEEEEeCCCcc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~~ 735 (808)
| ...++.|.|..+|..+
T Consensus 84 n----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 84 A----SKSTASLHVEEKASGP 100 (103)
T ss_dssp S----CEEEEEEEECCCSSSS
T ss_pred c----CCcEEEEEEeCCCCCC
Confidence 9 4788999999887643
No 451
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.51 E-value=1.4e-13 Score=136.65 Aligned_cols=170 Identities=15% Similarity=0.265 Sum_probs=111.5
Q ss_pred cccCCCceEEEEEEeeCCCCCcEEEEEECC--Ee---c--------------CCCCCeEEEeeC--cEEEEEECCCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDPTLKVEWFRNE--KP---L--------------EDSSRITTKHDF--GYVAMDLSHVRAED 573 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g--~~---l--------------~~~~~~~~~~~~--~~~~L~I~~v~~~D 573 (808)
.+.+|++|+|.|.+.....+...+.|||.. .. + ....|+.+..+. +.++|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (226)
T 3mlr_H 11 VKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASD 90 (226)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGG
T ss_pred EEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCccc
Confidence 588999999999984212345679999832 11 1 012466665443 56789999999999
Q ss_pred CEEEEEEEEeCCee------EE---EEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC
Q psy2145 574 EGIYICKATNALGE------AV---TTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG 644 (808)
Q Consensus 574 ~G~Y~C~a~N~~G~------~~---~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~ 644 (808)
+|.|.|.+.+..+. .. ....|.|...+. .+|.+......
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~--------------------------------~~P~i~~~~~~ 138 (226)
T 3mlr_H 91 TGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTT--------------------------------KGPSVFPLAPS 138 (226)
T ss_dssp CEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCC--------------------------------BCCEEEEEEEE
T ss_pred CEEEEEeEccCCCcccccchhhhhCCccEEeeccCCC--------------------------------CCCcEEEecCc
Confidence 99999999875310 11 113455543211 23555432221
Q ss_pred CccccCCceEEEEEEEeeCCCC-CeEEEEEECCEEccC-----------CCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGDP-TMRFEWFVNGVELKM-----------GSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~P-~p~i~W~~~g~~l~~-----------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
..+.+|+.++|.|.+. ...| .+.|.| +|..+.. +..|.+ .+.|.|.....+| |.|+|.
T Consensus 139 -~~~~~g~~~~l~C~~~-~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~ 208 (226)
T 3mlr_H 139 -SKSTSGGTAALGCLVK-DYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICN 208 (226)
T ss_dssp -ECSTTSSEEEEEEEEE-EEBSSCCEEEE--GGGTCCTTEEECCCEECTTSCEEE-----EEEEEEEGGGTTT-CCCEEE
T ss_pred -ccccCCCCEEEEEEEE-EEECCCeEEEE--CCccccCCeEeCCcEECCCCCEEE-----EEEEEECHhHcCC-CeEEEE
Confidence 2456899999999994 2245 578999 6544322 223333 2479999999889 999999
Q ss_pred EEeCCcceEEEEEE
Q psy2145 713 AINRAGEAVSSTSL 726 (808)
Q Consensus 713 A~N~~G~~~~s~~l 726 (808)
|.|..+.......|
T Consensus 209 v~h~~~~~~~~~~~ 222 (226)
T 3mlr_H 209 VNHKPSNTKVDKKV 222 (226)
T ss_dssp EEEGGGTEEEEEEC
T ss_pred EEECCCCcCeEEEc
Confidence 99999887655554
No 452
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.51 E-value=7e-14 Score=118.83 Aligned_cols=94 Identities=21% Similarity=0.458 Sum_probs=82.1
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecC--CCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLE--DSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~--~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
.||.|...+... .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+. ...++.+....+..+|.|.++..+|+|.|+|
T Consensus 4 ~pP~i~~~~~~~-~~~~G~~~~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (100)
T 3irg_A 4 IPPKIEALPSDI-SIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp EEEEECCCCSEE-EEETTSEEEEEEEE--EEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCeeecCCCcE-EEcCCCcEEEEEEE--EEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEE
Confidence 367787776665 68999999999999 789999999999999987 3567888777777799999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEe
Q psy2145 580 KATNALGEAVTTASMKIKT 598 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~ 598 (808)
.|.|..|....++.|.|..
T Consensus 81 ~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 81 SLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEeCCCcEEEEEEEEEEe
Confidence 9999999999999998863
No 453
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=7.6e-15 Score=125.13 Aligned_cols=90 Identities=21% Similarity=0.320 Sum_probs=78.3
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCC----cEEEEEeCCEEEEEEccCCCCCcEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGS----RFHVQHDFGYVTLDITKCVPADSGVYM 710 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~----~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 710 (808)
+|.|...+.. ..+.+|+.++|.|.+ .|.| +.|.|||||..+..+. +|.+..+++...|.|.++..+|+|.|+
T Consensus 8 p~~~~~~~~~-~~v~~G~~v~l~C~~--~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 83 (101)
T 2edk_A 8 PVLIVTPLED-QQVFVGDRVEMAVEV--SEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQ 83 (101)
T ss_dssp CCCEEECCCC-EEEESSCCCBCCEEE--SCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEE
T ss_pred CCEEEecCCc-eEEcCCCCEEEEEEE--eCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEE
Confidence 4677766554 679999999999999 7888 9999999999998877 778888888889999999999999999
Q ss_pred EEEEeCCcceEEEEEEEEEeCC
Q psy2145 711 CKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 711 C~A~N~~G~~~~s~~l~V~~~p 732 (808)
|.|.| ...++.|.|..+|
T Consensus 84 C~a~n----~~~~~~l~V~~~P 101 (101)
T 2edk_A 84 VITNG----GQCEAELIVEEKQ 101 (101)
T ss_dssp EECSS----CEECCBEEEECCC
T ss_pred EEEcC----CcEEEEEEEeCCC
Confidence 99988 4677889998765
No 454
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=4.4e-14 Score=120.70 Aligned_cols=89 Identities=27% Similarity=0.463 Sum_probs=79.3
Q ss_pred CCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCC-CcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 634 EKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMG-SRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 634 ~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
.+|.|...+.....+.+|+.+.|.|.+ +.|.+.|.|+|||..|..+ .++.+..+++..+|.|.++..+|+|.|+|.
T Consensus 14 ~~p~f~~~~~~~~~v~~G~~v~L~C~~---~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 90 (104)
T 1pd6_A 14 KSTAFQKKLEPAYQVSKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 90 (104)
T ss_dssp TTSSCSEECCSEEEEETTSCEEEEEEC---SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEE
T ss_pred CCCEEEEcCCCcEEEecCCCEEEEEEE---cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEE
Confidence 468898888876789999999999998 6899999999999999988 899998888889999999999999999999
Q ss_pred EEeCCcceEEEEEEEEE
Q psy2145 713 AINRAGEAVSSTSLKVK 729 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~ 729 (808)
| |....++.|.|.
T Consensus 91 a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 91 V----GGEKCSTELFVK 103 (104)
T ss_dssp E----TTEEECCEEEEE
T ss_pred E----CCCcEEEEEEEe
Confidence 8 556777888886
No 455
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.50 E-value=1.1e-13 Score=140.48 Aligned_cols=171 Identities=16% Similarity=0.296 Sum_probs=111.2
Q ss_pred cccCCCceEEEEEEeeCCCC--CcEEEEEECC--Ee---c-------------CCCCCeEEEee--CcEEEEEECCCCCC
Q psy2145 515 AVEEGKNAHFSCRLIPVGDP--TLKVEWFRNE--KP---L-------------EDSSRITTKHD--FGYVAMDLSHVRAE 572 (808)
Q Consensus 515 ~v~~G~~v~l~C~v~~~g~P--~~~v~W~k~g--~~---l-------------~~~~~~~~~~~--~~~~~L~I~~v~~~ 572 (808)
.+.+|++|+|.|.+ .+.+ ...|.|||.. .. + ....|+.+..+ .+.++|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~--~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 88 (263)
T 3iu4_H 11 LVAPSQSLSITCTV--SGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTD 88 (263)
T ss_dssp EECTTSCEEEEEEE--ESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEe--ccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHH
Confidence 58899999999998 4433 5679999732 11 1 01356766543 35678999999999
Q ss_pred CCEEEEEEEEeCC-----eeE---EEEEEEEEEecccccccccCcccccccccccCCCCCCCCCCccccCCCeEEeecCC
Q psy2145 573 DEGIYICKATNAL-----GEA---VTTASMKIKTKAGLQLETQHPEGLKKIQELEQPASPMPQEPERQYEKPIFTQLLTG 644 (808)
Q Consensus 573 D~G~Y~C~a~N~~-----G~~---~~s~~l~V~~~~~i~~~~~~p~~~~~i~~l~~~~~~~~~~~~~~~~~P~~~~~~~~ 644 (808)
|+|.|.|.+.+.. +.. .....|.|...+. .+|.+......
T Consensus 89 DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~--------------------------------~~P~v~~~~~~ 136 (263)
T 3iu4_H 89 DTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAST--------------------------------KGPSVFPLAPS 136 (263)
T ss_dssp GCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCC--------------------------------BCCEEEEECCC
T ss_pred HCEEEEEEEEeCCCCccccccceeCCceEEEEecccC--------------------------------CCCEEEEccCc
Confidence 9999999999864 111 1123555543211 23555533322
Q ss_pred CccccCCceEEEEEEEeeCCCC-CeEEEEEECCEEccC-----------CCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGDP-TMRFEWFVNGVELKM-----------GSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~P-~p~i~W~~~g~~l~~-----------~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
..+.+|+.++|.|.+. ...| .+.|.| ||..+.. +..|.+ .+.|.|.....+| |.|+|.
T Consensus 137 -~~~~~g~~~~L~C~~~-~~~P~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~ 206 (263)
T 3iu4_H 137 -SKGSTSGTAALGCLVK-DYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICN 206 (263)
T ss_dssp -CCC----EEEEEEEEE-EEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEE-----EEEEEEETTHHHH-CCCEEE
T ss_pred -cccccCCcEEEEEEEE-eEeCCceEEEE--CCcccCCceeecCceECCCCCEEE-----EEEEEECHhHcCC-CEEEEE
Confidence 3466899999999994 2245 378999 6654432 122222 2479999988889 999999
Q ss_pred EEeCCcceEEEEEEEEE
Q psy2145 713 AINRAGEAVSSTSLKVK 729 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~ 729 (808)
|.|..+.......|.+.
T Consensus 207 v~h~~~~~~~~~~~~~~ 223 (263)
T 3iu4_H 207 VNHKPSNTKVDKKVEPA 223 (263)
T ss_dssp EEEGGGTEEEEEECCCC
T ss_pred EEECCCCcceeEEEcCC
Confidence 99999987777666654
No 456
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.50 E-value=7.9e-14 Score=120.34 Aligned_cols=91 Identities=23% Similarity=0.363 Sum_probs=72.3
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCC---eEEEEEECCEEcc---CCCcEEEEEe------CCEEEEEEccCCC
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPT---MRFEWFVNGVELK---MGSRFHVQHD------FGYVTLDITKCVP 703 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~---p~i~W~~~g~~l~---~~~~~~~~~~------~~~~~L~I~~v~~ 703 (808)
|.|...+.. ..+.+|++++|.|.+ .|.|. |.|.|||++.... .+.++.+... .+..+|.|.++..
T Consensus 5 p~f~~~p~~-~~v~~G~~v~L~C~~--~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 81 (108)
T 3cx2_A 5 GLFVMRPQD-GEVTVGGSITFSARV--AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQP 81 (108)
T ss_dssp CSCSBCCCC-EEEETTCCEEEEEEE--ECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCG
T ss_pred cEEEeCCCc-EEEeCCCCEEEEEEE--CCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCC
Confidence 666666543 678999999999999 79998 9999999883222 1345655321 1246899999999
Q ss_pred CCcEEEEEEEEeCCcceEEEEEEEEE
Q psy2145 704 ADSGVYMCKAINRAGEAVSSTSLKVK 729 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~G~~~~s~~l~V~ 729 (808)
+|+|.|+|.|.|.+|..++++.|.|.
T Consensus 82 ~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 82 AFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ccCEEEEEEEecCCCceEEEEEEEEe
Confidence 99999999999999999999999996
No 457
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=3.8e-14 Score=124.70 Aligned_cols=94 Identities=21% Similarity=0.292 Sum_probs=81.5
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccC-CCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKS-GSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+.++.+.+|++++|.|.+ .+.|.+.|.|+|+|..+.. ..++....++ +|.|.+++.+|+|.|+|.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~--~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~ 80 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVA--TGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCI 80 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBC--CCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEE--EecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEE
Confidence 568999999999999999999999999 6889999999999999864 4555554443 799999999999999999
Q ss_pred EEeCceeEEEEEEEEEeeCC
Q psy2145 260 AVNALGQAVTSGNLLVHSKK 279 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~~~ 279 (808)
|.|..|....++.|.|...+
T Consensus 81 a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 81 ASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp EECSSCEEEEECCEEEECCS
T ss_pred EEcCCCcEEEEEEEEEEeCC
Confidence 99999999888999997643
No 458
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.50 E-value=1.7e-13 Score=119.42 Aligned_cols=82 Identities=20% Similarity=0.232 Sum_probs=70.6
Q ss_pred cCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeC-------cEEEEEECCCCCCCCEEEEEEEEeCCeeEE
Q psy2145 517 EEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDF-------GYVAMDLSHVRAEDEGIYICKATNALGEAV 589 (808)
Q Consensus 517 ~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~-------~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~ 589 (808)
..+..+.|.|.+ .|.|.|+|+|+|||++|..+.++...... ...+|.|.++...|+|.|+|+|.|..|...
T Consensus 13 ~~~~~~~l~c~v--~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~ 90 (126)
T 1he7_A 13 VEMHHWCIPFSV--DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 90 (126)
T ss_dssp CCCCEEEEEEEE--CCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEE
T ss_pred ccCccEEEEEEE--eeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEE
Confidence 467889999999 89999999999999999988776544221 234799999999999999999999999999
Q ss_pred EEEEEEEEecc
Q psy2145 590 TTASMKIKTKA 600 (808)
Q Consensus 590 ~s~~l~V~~~~ 600 (808)
.++.|.|...|
T Consensus 91 ~t~~l~v~~~P 101 (126)
T 1he7_A 91 ASIMAAFMDNP 101 (126)
T ss_dssp EEEEECCCSCT
T ss_pred EEEEEEEEcCC
Confidence 99999888765
No 459
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.49 E-value=4.4e-14 Score=121.81 Aligned_cols=93 Identities=23% Similarity=0.331 Sum_probs=73.9
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCC---CCeEEEEEECCE-EccC--CCcEEEEEeC------CEEEEEEccCCC
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGD---PTMRFEWFVNGV-ELKM--GSRFHVQHDF------GYVTLDITKCVP 703 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~---P~p~i~W~~~g~-~l~~--~~~~~~~~~~------~~~~L~I~~v~~ 703 (808)
+.|+..+. ...+.+|+.++|.|.+ .|. |.|.|+|||++. .+.. +.++.+.... ...+|.|.++..
T Consensus 13 ~~f~~~P~-~v~V~eG~~v~L~C~v--~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 13 GVFLKKPD-SVSVETGKDAVVVAKV--NGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp SSCSBCCC-CCEEETTSCEECCEEE--ETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred ceEEECCC-CeEEeCCCCEEEEEEE--eccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 56666654 3679999999999999 564 899999999752 2222 3455554321 147999999999
Q ss_pred CCcEEEEEEEEeCCcceEEEEEEEEEeC
Q psy2145 704 ADSGVYMCKAINRAGEAVSSTSLKVKSK 731 (808)
Q Consensus 704 ~D~G~Y~C~A~N~~G~~~~s~~l~V~~~ 731 (808)
.|+|.|+|+|+|..|..++++.|.|+.+
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999999999999875
No 460
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.49 E-value=5.7e-13 Score=125.13 Aligned_cols=159 Identities=10% Similarity=0.112 Sum_probs=107.5
Q ss_pred CCCCccccCCCCcEEEEEEEeeCCCCCceEEEEe-CCEEeeccCcEEEEeeCCeEEEEEcccCcCCCeeEEEEEEecCcc
Q psy2145 55 KPKSIENLRERGHAHFECKLEPVTDSNLKVEWFK-NGRPVTIGHRFRPIHDFGYVALDIIDTIPEDSGTYTCRAVNLVGF 133 (808)
Q Consensus 55 ~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~-~g~~l~~~~r~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 133 (808)
.|+++ .|.+|+++.|.|.+.. ..|. .+.|.- .++.+.. ....+...|.|.+++. | |.|.|.+.+....
T Consensus 5 ~P~~~-~V~~G~Sv~l~Cs~~c-~~p~-~~~~~t~l~~~~~~------~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~ 73 (185)
T 1iam_A 5 SPSKV-ILPRGGSVLVTCSTSC-DQPK-LLGIETPLPKKELL------LPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQ 73 (185)
T ss_dssp ESSEE-EEETTEEEEEEEEECS-SSCS-EEEEECSSCEEEEC------SSSSSEEEEEEEEECS-C-BCCEEEEECSSCE
T ss_pred ECCCc-EEeCCCCEEEEEEccC-CCCc-cceEEeeCCCccEe------ccCCceeEEEEEecCc-C-CEEEEEEECCCCc
Confidence 45666 7999999999999974 3333 477753 1111110 1123445799999973 4 9999999765455
Q ss_pred eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCC
Q psy2145 134 AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDN 213 (808)
Q Consensus 134 ~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p 213 (808)
....+.|+|+. .|..+.+.+....+.+|+.++|.|.+.+ +.|
T Consensus 74 ~~~~~~l~V~~-------------------------------------~P~~v~i~~~~~~~~~G~~~tL~C~v~g-~~P 115 (185)
T 1iam_A 74 STAKTFLTVYW-------------------------------------TPERVELAPLPSWQPVGKQLTLRCQVEG-GAP 115 (185)
T ss_dssp EEEECEEEEEB-------------------------------------CCSEEEECCCCSEECTTSEEEEEEEEEC-CBC
T ss_pred eEEEEEEEEeC-------------------------------------CCCCCEEccCCccccCCCcEEEEEEcCC-ccC
Confidence 67778888863 3444555666666999999999999963 456
Q ss_pred C--eEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCce
Q psy2145 214 T--MKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALG 265 (808)
Q Consensus 214 ~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g 265 (808)
. +.|.|||+++.+.... ...+....+|.+.....+|...|+|+|.|..+
T Consensus 116 ~~~l~i~w~kg~~~l~~~~---~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 116 RAQLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp GGGEEEEEEETTEEEEEEE---CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred CCCcEEEEEeCCEEccccc---CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 5 4699999999986432 11223344677665555555599999998665
No 461
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.49 E-value=2.6e-13 Score=134.37 Aligned_cols=170 Identities=14% Similarity=0.167 Sum_probs=108.8
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--C---EEee---------ccCcEEEEee--CCeEEEEEcccC
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--G---RPVT---------IGHRFRPIHD--FGYVALDIIDTI 116 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g---~~l~---------~~~r~~~~~~--~~~~~L~I~~~~ 116 (808)
...|..+ .+.+|++++|.|.+.+.......+.|||. | ..|. ...|+.+..+ .+.++|.|.+++
T Consensus 5 ~q~p~~v-~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 5 VPEHQTV-PVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EESCSEE-EEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred EeCCCEE-EEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 3456677 89999999999999842212468999984 2 2221 1367877654 567899999999
Q ss_pred cCCCeeEEEEEEecCc------c--eEEEEEEEEecCCCccccccccccceeeeeeccccccccccccccccCCCCeEEe
Q psy2145 117 PEDSGTYTCRAVNLVG------F--AEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQRGEYIEETTTQAPIFTT 188 (808)
Q Consensus 117 ~~D~G~Y~C~a~n~~g------~--~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 188 (808)
.+|+|.|.|.+.+..+ . ....+.|.|..... ...+|.+..
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~--------------------------------~~~~P~v~~ 131 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQ--------------------------------PHTKPSVFV 131 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSC--------------------------------CCBCCEEEE
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCC--------------------------------CCcCCcEEE
Confidence 9999999999987631 1 11234666653210 023454443
Q ss_pred ecCceeecCCCeEEEEEEEeecCCCC-eEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeCcee
Q psy2145 189 SLKNCEIKEGQRAHFECRLIPVSDNT-MKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNALGQ 266 (808)
Q Consensus 189 ~~~~~~v~~G~~v~L~C~~~~~~~p~-~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~ 266 (808)
.. ..++|.|.+.+ ..|. +.|.|+++ ..+..+........+|.+++. .....+|.|.|+|.|.|..+.
T Consensus 132 ~~--------~~~~L~C~~~g-~~P~~i~v~W~~~-~~~~~~~~~~~~~~dg~y~~~-~~~~~~~~~~ytC~V~h~~~~ 199 (229)
T 1hxm_A 132 MK--------NGTNVACLVKE-FYPKDIRINLVSS-KKITEFDPAIVISPSGKYNAV-KLGKYEDSNSVTCSVQHDNKT 199 (229)
T ss_dssp EE--------ETTEEEEEEES-CBSSCCEEEEECS-SEEEECCCEEEECTTSSEEEE-EEEEETTTTTCEEEEEETTEE
T ss_pred cC--------CCCeEEEEEEE-EeCCCEEEEEecC-CEEecCccceEECCCCcEEEE-ECcccCCCCcEEEEEEeCCCC
Confidence 22 12489999963 3454 49999999 777644332222344544443 222347889999999997653
No 462
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.49 E-value=3.5e-14 Score=122.02 Aligned_cols=94 Identities=20% Similarity=0.303 Sum_probs=85.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..+|.|...+.++.+.+|+++.|.|.+ .+.|.+.|.|+|+|..+..+.++.+....+..+|.|.++..+|+|.|+|.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~--~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 89 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDT--DGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVV 89 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEE--ECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEE--EEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEE
Confidence 568999999999999999999999999 588889999999999998888888877666779999999999999999999
Q ss_pred EeCceeEEEEEEEEEe
Q psy2145 261 VNALGQAVTSGNLLVH 276 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V~ 276 (808)
.|..|....++.|.|.
T Consensus 90 ~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 90 ENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp BCSSCBCCEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEE
Confidence 9999998888888874
No 463
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.49 E-value=1.4e-13 Score=117.01 Aligned_cols=92 Identities=21% Similarity=0.421 Sum_probs=82.5
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
.+|.|..++.+...+.+|+++.|.|.+ . .|.+.|.|+|||..+..+.++.+..++....|.|.++..+|+|.|+|.|
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~--~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVEL--A-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEE--S-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEe--c-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 489999998885578899999999999 6 6999999999999999888999888888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEEecc
Q psy2145 582 TNALGEAVTTASMKIKTKA 600 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~~~~ 600 (808)
|....++.|.|..+|
T Consensus 83 ----g~~~~~~~l~V~~~P 97 (100)
T 2yuv_A 83 ----GDEKCSTELFVRSGP 97 (100)
T ss_dssp ----TTEEEEEEEEECCSC
T ss_pred ----CCceEEEEEEEecCC
Confidence 778888999998754
No 464
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.49 E-value=1.4e-13 Score=120.94 Aligned_cols=83 Identities=22% Similarity=0.197 Sum_probs=71.7
Q ss_pred CceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeC----CEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEEE
Q psy2145 651 GQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDF----GYVTLDITKCVPADSGVYMCKAINRAGEAVSSTSL 726 (808)
Q Consensus 651 G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~l 726 (808)
.....|.|.+ .|.|.|.|.|+|||..+..+.++.+.... ...+|.|.++..+|+|.|+|.|.|.+|.+..++.|
T Consensus 20 ~~~~~l~C~~--~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l 97 (118)
T 1wwc_A 20 RLEHCIEFVV--RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTING 97 (118)
T ss_dssp CCEEEEEEEE--ECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred ccceEEEEEe--eeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEEEEEEEECCCCeEeeEEEE
Confidence 3667899999 79999999999999999988877664422 35689999999999999999999999999999999
Q ss_pred EEEeCCCcc
Q psy2145 727 KVKSKSDIV 735 (808)
Q Consensus 727 ~V~~~p~~~ 735 (808)
.|..+|...
T Consensus 98 ~v~~~P~~v 106 (118)
T 1wwc_A 98 HFLKEPFPV 106 (118)
T ss_dssp CCSCCCCCS
T ss_pred EEccCCCch
Confidence 998887543
No 465
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=3.6e-14 Score=122.11 Aligned_cols=90 Identities=21% Similarity=0.316 Sum_probs=79.3
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.+ ..+.+|+.+.|.|.+ .|.|.+ |.|||||..+..+.++.+..++....|.|.++..+|+|.|+|.|.
T Consensus 8 ~p~~~~~~~~-~~v~~G~~v~l~C~~--~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 8 QLEVLQDIAD-LTVKAAEQAVFKCEV--SDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCEEECCCC-EEEESSCCEECCCEE--SCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCEEecCCCC-eEEeCCCeEEEEEEE--cCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEc
Confidence 4777776654 689999999999999 788888 999999999999999999988888999999999999999999999
Q ss_pred eCCcceEEEEEEEEEe
Q psy2145 715 NRAGEAVSSTSLKVKS 730 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~ 730 (808)
|. ..+.++.|.|..
T Consensus 84 n~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 84 GY--ALSLSAKLNFLE 97 (106)
T ss_dssp TS--CCCCCBCEEEEC
T ss_pred cC--CceEEEEEEEEE
Confidence 99 555677777763
No 466
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.49 E-value=3.5e-13 Score=136.60 Aligned_cols=182 Identities=12% Similarity=0.119 Sum_probs=113.7
Q ss_pred cCceeecCCCeEEEEEEEeecCCCCeEEEEeeC--CEE---c--------------cCCCceEEEec--CceEEEEEccC
Q psy2145 190 LKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHN--NVP---I--------------KSGSRFTETNN--FGFVALDIMQC 248 (808)
Q Consensus 190 ~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~--g~~---l--------------~~~~~~~~~~~--~~~~~L~I~~~ 248 (808)
+..+.+.+|++|+|.|.+.+.......+.|||. +.. + ....|+.+..+ .+.++|.|.++
T Consensus 30 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 109 (256)
T 3sob_H 30 SGGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSL 109 (256)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCC
Confidence 346779999999999999532233578999983 211 1 01245555432 35678999999
Q ss_pred CCCCcEEEEEEEEeCce-----------eEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCe
Q psy2145 249 LPEDSGVYTCRAVNALG-----------QAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPV 317 (808)
Q Consensus 249 ~~~D~G~Y~C~a~n~~g-----------~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~ 317 (808)
+.+|+|.|.|.+.+..| .....+.|.|... ...+|.
T Consensus 110 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~---------------------------------~~~~P~ 156 (256)
T 3sob_H 110 RAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSA---------------------------------STKGPS 156 (256)
T ss_dssp CGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSS---------------------------------CCBCCE
T ss_pred CcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecC---------------------------------CCCCCE
Confidence 99999999999987431 1222346666531 123455
Q ss_pred eccCCCceEeecCCeEEEEEEEeecCCC-ccEEEEEECCEeccCCCc---EEEEeeCc---EEEEEEccCCCCCCeEEEE
Q psy2145 318 FTQPMRDIHVAENQAAHFEARLIPVGDS-KLKVTWLRNGVPIQASNR---VSTMHDFG---YVALNFKYTYPEDSGTYTC 390 (808)
Q Consensus 318 ~~~~~~~~~v~~G~~~~l~C~~~~~g~p-~~~v~W~~~g~~l~~~~~---~~~~~~~~---~~~L~I~~v~~~d~G~Y~C 390 (808)
+........+.+|+.++|.|.+.. ..| .+.+.| +|..+..... .....++. .+.|.|.....+| |.|+|
T Consensus 157 i~~~~~~~~~~~g~~v~L~C~~~~-~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC 232 (256)
T 3sob_H 157 VFPLAPSSKSTSGGTAALGCLVKD-YFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYIC 232 (256)
T ss_dssp EEEECCC-----TTEEEEEEEEEE-EBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEE
T ss_pred EEEECCCcccccCCcEEEEEEEEE-EECCCeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEE
Confidence 543233334578999999999842 245 578999 6655432110 01111111 2368899999899 99999
Q ss_pred EEEcCCcceEEEEEEEEE
Q psy2145 391 RAVNELGEAVTSSTLFVE 408 (808)
Q Consensus 391 ~a~n~~g~~~~~~~l~V~ 408 (808)
.|.|..+.......|.+.
T Consensus 233 ~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 233 NVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp EEEEGGGTEEEEEECCCC
T ss_pred EEEeCCCCcceEEEeccc
Confidence 999998777666666554
No 467
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.49 E-value=1.8e-13 Score=126.69 Aligned_cols=101 Identities=34% Similarity=0.651 Sum_probs=87.2
Q ss_pred CccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEee-CcEEEEEECCCCCCCCEEE
Q psy2145 499 ATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHD-FGYVAMDLSHVRAEDEGIY 577 (808)
Q Consensus 499 ~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~-~~~~~L~I~~v~~~D~G~Y 577 (808)
.+..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+..+.++.+... .+...|.|.+++.+|+|.|
T Consensus 37 ~v~~~P~~~~~~~~~-~v~~G~~v~L~C~~--~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 113 (154)
T 1fhg_A 37 KPHVKPYFTKTILDM-EVVEGSAARFDCKV--EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKY 113 (154)
T ss_dssp CCCEEEEEEECCCCE-EEETTSCEEEEEEE--EEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEEE
T ss_pred cCCCCCeEEccCCcE-EEeCCCeEEEEEEE--EEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEEE
Confidence 345689999888876 68999999999999 7999999999999999998888877643 4556899999999999999
Q ss_pred EEEEEeCCeeEEEEEEEEEEecccc
Q psy2145 578 ICKATNALGEAVTTASMKIKTKAGL 602 (808)
Q Consensus 578 ~C~a~N~~G~~~~s~~l~V~~~~~i 602 (808)
+|.|.|..|....++.|.|...+.+
T Consensus 114 ~C~a~N~~G~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 114 TCKAVNSLGEATCTAELLVETMGKE 138 (154)
T ss_dssp EEEEEETTEEEEEEEEEEEECC---
T ss_pred EEEEEECCCeEEEEEEEEEeCcCcC
Confidence 9999999999999999999987654
No 468
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=1.3e-14 Score=123.38 Aligned_cols=82 Identities=24% Similarity=0.433 Sum_probs=68.6
Q ss_pred CccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEE-EEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEE
Q psy2145 645 TSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFH-VQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSS 723 (808)
Q Consensus 645 ~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s 723 (808)
...+.+|+.+.|.|.+ .|.|.|.|.|+|||..+..+.++. +....+..+|.|.++..+|+|.|+|.|.|..|....+
T Consensus 17 ~~~v~~G~~v~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~ 94 (100)
T 3caf_A 17 LHAVPAANTVKFRCPA--GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94 (100)
T ss_dssp EEEECTTCCEEEECCE--EEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred EEEecCCCEEEEEEEc--cccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEE
Confidence 3468899999999999 799999999999999998654421 1222233489999999999999999999999999999
Q ss_pred EEEEE
Q psy2145 724 TSLKV 728 (808)
Q Consensus 724 ~~l~V 728 (808)
+.|.|
T Consensus 95 ~~l~V 99 (100)
T 3caf_A 95 YHLDV 99 (100)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99887
No 469
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.49 E-value=1.8e-13 Score=139.61 Aligned_cols=185 Identities=14% Similarity=0.207 Sum_probs=116.0
Q ss_pred ecCCCCccccCCCCcEEEEEEEeeCCCCCceEEEEeC--CE---Eee--------------ccCcEEEEeeC--CeEEEE
Q psy2145 53 VTKPKSIENLRERGHAHFECKLEPVTDSNLKVEWFKN--GR---PVT--------------IGHRFRPIHDF--GYVALD 111 (808)
Q Consensus 53 ~~~p~~~~~v~~G~~v~l~C~~~~~~~p~~~v~W~~~--g~---~l~--------------~~~r~~~~~~~--~~~~L~ 111 (808)
+..|..+ .+.+|++|+|.|.+.+.......+.|||. +. .+. ...|+.+..+. +.++|.
T Consensus 27 v~q~~~~-~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 105 (267)
T 3u1s_H 27 LVQSGAE-VKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYME 105 (267)
T ss_dssp EEECCCE-EECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEE
T ss_pred EEeeCCE-EEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEE
Confidence 3445566 79999999999999742234568999983 21 110 12577765443 567899
Q ss_pred EcccCcCCCeeEEEEEEec------Cc------------c-------eEEEEEEEEecCCCccccccccccceeeeeecc
Q psy2145 112 IIDTIPEDSGTYTCRAVNL------VG------------F-------AEVQATLQCRGSAGILTSTQNETGLEQIQYLED 166 (808)
Q Consensus 112 I~~~~~~D~G~Y~C~a~n~------~g------------~-------~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~ 166 (808)
|.+++.+|+|.|.|.+.+. .+ . ....+.|.|...
T Consensus 106 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~--------------------- 164 (267)
T 3u1s_H 106 LRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSA--------------------- 164 (267)
T ss_dssp ECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCC---------------------
T ss_pred ECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCC---------------------
Confidence 9999999999999999631 01 0 011234444321
Q ss_pred ccccccccccccccCCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCce--EEEecCce----
Q psy2145 167 KSKYQRGEYIEETTTQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRF--TETNNFGF---- 240 (808)
Q Consensus 167 ~~~~~~~~~~~~~~~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~--~~~~~~~~---- 240 (808)
...+|.+........+.+|+.++|.|.+.+...+.+.+.| ||..+..+... .....++.
T Consensus 165 -------------~~~~P~v~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~ 229 (267)
T 3u1s_H 165 -------------STKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLS 229 (267)
T ss_dssp -------------CCBCCEEEEECCCGGGEETTEEEEEEEEEEEBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEE
T ss_pred -------------CCCCCEEEEecCCcccCCCCcEEEEEEEeEEECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEE
Confidence 1346666643434344689999999999642222678999 66555322110 01112221
Q ss_pred EEEEEccCCCCCcEEEEEEEEeCceeEEEEEEEEE
Q psy2145 241 VALDIMQCLPEDSGVYTCRAVNALGQAVTSGNLLV 275 (808)
Q Consensus 241 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 275 (808)
..|.|.....+| |.|+|.|.|..+.......+.+
T Consensus 230 s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~~ 263 (267)
T 3u1s_H 230 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEP 263 (267)
T ss_dssp EEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred EEEEECchhcCC-CEEEEEEEECCCCcceEEEccc
Confidence 258898888888 9999999998765555444443
No 470
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=9.1e-14 Score=122.23 Aligned_cols=95 Identities=23% Similarity=0.382 Sum_probs=81.6
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCC-CCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLED-SSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~-~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|||..+.. ..++....+ + +|.|.+++.+|+|.|+|
T Consensus 6 ~~pP~i~~~p~~~-~v~~G~~v~l~C~~--~g~p~p~i~W~k~g~~~~~~~~~~~~~~~-~--~L~i~~v~~~D~G~Y~C 79 (118)
T 2eo9_A 6 SGPPVIRQGPVNQ-TVAVDGTFVLSCVA--TGSPVPTILWRKDGVLVSTQDSRIKQLEN-G--VLQIRYAKLGDTGRYTC 79 (118)
T ss_dssp CCSCCCSBCCCCE-EEETTCEEEEECBC--CCSSCCEEEEEESSSBCCTTSTTEEEEET-T--EEEEESCCGGGCCCEEE
T ss_pred CCCCEEEcCCCCE-EEcCCCeEEEEEEE--EecCCCEEEEEECCEECcCCCCeEEEccC-C--EEEEccCCcCCCEEEEE
Confidence 4578888877776 68999999999999 8999999999999999875 456655443 4 79999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEeccc
Q psy2145 580 KATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
.|.|..|....++.|.|...+.
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~~~ 101 (118)
T 2eo9_A 80 IASTPSGEATWSAYIEVQEFGV 101 (118)
T ss_dssp EEECSSCEEEEECCEEEECCSC
T ss_pred EEEcCCCcEEEEEEEEEEeCCC
Confidence 9999999999999999987653
No 471
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=7.1e-14 Score=119.51 Aligned_cols=94 Identities=20% Similarity=0.314 Sum_probs=81.6
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCC-cEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT-LKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~-~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
..+|.|..++.+. .+.+|+.++|.|.+ .+.|. +.+.|+|||..|..+.++.+..++...+|.|.++..+|+|.|+|
T Consensus 6 ~~p~~~~~~~~~~-~v~~G~~v~l~C~v--~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (104)
T 2eny_A 6 SGHVGITKRLKTM-EVLEGESCSFECVL--SHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVF 82 (104)
T ss_dssp CCCCCCSBCCCCE-EEESSCCEEEEEEC--SSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEE
T ss_pred cCCCEEEecCCCc-EEcCCCcEEEEEEE--cCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEE
Confidence 4567888888887 68999999999999 67774 48999999999999899998888888899999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEeccc
Q psy2145 580 KATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
.|.| ...++.|.|..+|.
T Consensus 83 ~a~~----~~~~a~L~V~~~p~ 100 (104)
T 2eny_A 83 SVRG----LTSKASLIVRERSG 100 (104)
T ss_dssp EETT----EEEEECEEEECCCS
T ss_pred EECC----eeEEEEEEEeCCCc
Confidence 9854 56889999987653
No 472
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=7.4e-14 Score=121.80 Aligned_cols=95 Identities=16% Similarity=0.240 Sum_probs=75.6
Q ss_pred cceeecCCCCccccCCCCcEEEEEEEeeC-CCCCceEEEEeCCEE-ee--ccCcEEEEee--C----CeEEEEEcccCcC
Q psy2145 49 IYYTVTKPKSIENLRERGHAHFECKLEPV-TDSNLKVEWFKNGRP-VT--IGHRFRPIHD--F----GYVALDIIDTIPE 118 (808)
Q Consensus 49 ~~~~~~~p~~~~~v~~G~~v~l~C~~~~~-~~p~~~v~W~~~g~~-l~--~~~r~~~~~~--~----~~~~L~I~~~~~~ 118 (808)
.+.++..|.++ .+.+|++++|.|.+.+. +.|.+.|+|||++.. +. .+.++.+... . ..++|.|.+++.+
T Consensus 7 ~~~F~~~P~~v-~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 85 (126)
T 2dav_A 7 GILFIEKPQGG-TVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDN 85 (126)
T ss_dssp SCSCCSCCCCC-EEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTT
T ss_pred ccEEEEcCCCe-EEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcc
Confidence 35677889998 99999999999999842 238899999997521 11 2456655322 1 2468999999999
Q ss_pred CCeeEEEEEEecCcceEEEEEEEEec
Q psy2145 119 DSGTYTCRAVNLVGFAEVQATLQCRG 144 (808)
Q Consensus 119 D~G~Y~C~a~n~~g~~~~~~~l~V~~ 144 (808)
|+|.|+|.|.|..|..+.++.|+|..
T Consensus 86 DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 86 FAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp SCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999999999986
No 473
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=1.2e-13 Score=117.40 Aligned_cols=92 Identities=24% Similarity=0.382 Sum_probs=79.9
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccC-CCceEEEecCceEEEEEccCCCCCcEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKS-GSRFTETNNFGFVALDIMQCLPEDSGVYTCR 259 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~-~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 259 (808)
..+|.|...+....+.+|++++|.|.+ .+.|.+.+.|+|+|..+.. ..++....+ + +|.|.+++.+|+|.|+|.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~-~--~L~i~~v~~~d~G~Y~C~ 80 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKA--TGDPLPVISWLKEGFTFPGRDPRATIQEQ-G--TLQIKNLRISDTGTYTCV 80 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEE--ECSSCCEEEEEESSSEESSSCSSCEECTT-C--CEEEESCCTTTCCEEEEE
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEE--EEcCCCEEEEEECCEECCCCCCCEEEcCC-C--EEEEccCCcccCEEEEEE
Confidence 568999999999999999999999999 5889999999999999873 445544333 3 799999999999999999
Q ss_pred EEeCceeEEEEEEEEEee
Q psy2145 260 AVNALGQAVTSGNLLVHS 277 (808)
Q Consensus 260 a~n~~g~~~~~~~l~V~~ 277 (808)
|.|..|....++.|.|..
T Consensus 81 a~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 81 ATSSSGETSWSAVLDVTE 98 (100)
T ss_dssp EECSSCCCBCCEEEEEES
T ss_pred EEcCCCCEEEEEEEEEec
Confidence 999999998899999875
No 474
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.47 E-value=3.5e-13 Score=117.43 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=80.8
Q ss_pred CCeEEeecCCC--ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEE
Q psy2145 635 KPIFTQLLTGT--SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCK 712 (808)
Q Consensus 635 ~P~~~~~~~~~--~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 712 (808)
+|.+...+... ..+.+|+.+.|.|.+ +.|.+.|.|+|||+.+..+.++.+..++...+|.|.++..+|+|.|+|.
T Consensus 10 pp~~~~~p~~~~~~~~~~G~~v~L~C~~---~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (113)
T 2cpc_A 10 VSSWIVYPSGKVYVAAVRLERVVLTCEL---CRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCE 86 (113)
T ss_dssp CSCSEEESCSCEEEEEETTCCEEEEEEE---SCTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEE
T ss_pred CCcEEEccCCceeEEEEcCCeEEEEEEe---cCCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEE
Confidence 45555544332 357899999999999 3899999999999999999999998888788999999999999999999
Q ss_pred EEeCCcceEEEEEEEEEeCCCcccc
Q psy2145 713 AINRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 713 A~N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
|.| .+.++.|.|..+|.++..
T Consensus 87 a~n----~~~~~~l~V~~~p~~~~~ 107 (113)
T 2cpc_A 87 IDD----ESASFTVTVTEPPVRIIY 107 (113)
T ss_dssp SSS----CEEEEEEEEECCCCCCCC
T ss_pred Eec----CcEEEEEEEecCCchhcc
Confidence 999 577899999998866543
No 475
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.47 E-value=1.4e-13 Score=115.63 Aligned_cols=86 Identities=21% Similarity=0.389 Sum_probs=76.2
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEe
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAIN 715 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N 715 (808)
|.|...+. ...+.+|+.+.|.|.+ +.|.+.|.|||||..|..+.++.+..++...+|.|.++..+|+|.|+|.|
T Consensus 9 ~~~~~~~~-~~~v~~G~~v~l~C~~---~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a-- 82 (95)
T 2k1m_A 9 SAFSKKPR-SVEVAAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA-- 82 (95)
T ss_dssp CCCSBCCC-CEEEETTSCEEEEEEC---SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE--
T ss_pred CeeEeCCC-cEEEeCCCcEEEEEEe---CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE--
Confidence 55555544 3578999999999998 78999999999999999999999998888899999999999999999998
Q ss_pred CCcceEEEEEEEEE
Q psy2145 716 RAGEAVSSTSLKVK 729 (808)
Q Consensus 716 ~~G~~~~s~~l~V~ 729 (808)
|....++.|.|.
T Consensus 83 --g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 --GSSKVKFDLKVI 94 (95)
T ss_dssp --TTEEEEEEEEEE
T ss_pred --CCceEEEEEEEe
Confidence 778888999886
No 476
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=1.6e-13 Score=123.46 Aligned_cols=82 Identities=24% Similarity=0.413 Sum_probs=72.4
Q ss_pred ccccCCCceEEEEEEeeCCCCCcEEEEEECC----------------------------Eec-CCCCCeEEEeeCcEEEE
Q psy2145 514 DAVEEGKNAHFSCRLIPVGDPTLKVEWFRNE----------------------------KPL-EDSSRITTKHDFGYVAM 564 (808)
Q Consensus 514 ~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g----------------------------~~l-~~~~~~~~~~~~~~~~L 564 (808)
..+.+|+++.|.|.+ .|.|.|.|+|+|+| ..+ ....++.+...+....|
T Consensus 28 ~~v~~G~~v~L~C~~--~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~L 105 (139)
T 1gxe_A 28 IVVVAGNKLRLDVPI--SGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIF 105 (139)
T ss_dssp EEESSSSCCCCEEEC--CSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEEE
T ss_pred EEEeCCCeEEEEEEE--EEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEEE
Confidence 368999999999999 89999999999999 555 34567777777777789
Q ss_pred EECCCCCCCCEEEEEEEEeCCeeEEEEEEEEEE
Q psy2145 565 DLSHVRAEDEGIYICKATNALGEAVTTASMKIK 597 (808)
Q Consensus 565 ~I~~v~~~D~G~Y~C~a~N~~G~~~~s~~l~V~ 597 (808)
.|.++..+|+|.|+|.|.|..|....++.|.|.
T Consensus 106 ~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 106 TVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp ECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 999999999999999999999999999998885
No 477
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=117.41 Aligned_cols=93 Identities=27% Similarity=0.562 Sum_probs=79.2
Q ss_pred CccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 499 ATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 499 ~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
....+|.|...+.+. .+.+|+.+.|.|.+ .|.|.|.+.|+|+|..+...... ...+...|.|.++..+|+|.|+
T Consensus 7 ~~~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~---~~~~~~~L~i~~v~~~D~G~Y~ 80 (99)
T 2yr3_A 7 GMEVAPSFSSVLKDC-AVIEGQDFVLQCSV--RGTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPEDHGTYT 80 (99)
T ss_dssp CCCEEEEEEECCCCE-EECTTCCEEEECEE--EEESCCCCEEEESSSBCSSCCCE---EETTEEEEEECSCCTTCCBCEE
T ss_pred CcccCCceeecCCCC-EEeCCCeEEEEEEE--eeeCCCeEEEEECCEECcccceE---eeCCeEEEEECCCChhhCEEEE
Confidence 345688998888776 68999999999999 78999999999999998765542 2344568999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIK 597 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~ 597 (808)
|.|.|..|....++.|.|+
T Consensus 81 C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 81 CLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp EEEECSSCEEEEECCEEEC
T ss_pred EEEEECCCeEEEEEEEEEC
Confidence 9999999999988888773
No 478
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.46 E-value=8.3e-14 Score=120.31 Aligned_cols=96 Identities=30% Similarity=0.545 Sum_probs=72.7
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+....++......+ .|.|.+++.+|+|.|+|.
T Consensus 8 ~~~P~~~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~--~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 8 RVAPTITGNLENQ-TTSIGESIEVSCTA--SGNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp ---CCCBSCCCCE-EEETTCCEEEECBC--C----CCEEEEESSSBCCCBTTEEEETTTT--EEEECSCCGGGCEEEEEE
T ss_pred cCCCceecCCCCe-EEeCCCeEEEEEEC--cCcCCCeEEEEECCeEcccCCCeEEeCCCc--EEEEeecCcccCEEEEEE
Confidence 4578888877776 68999999999999 899999999999999998877776654444 799999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEeccc
Q psy2145 581 ATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~~~ 601 (808)
|.|..|....++.|.|...+.
T Consensus 83 a~n~~g~~~~~~~l~V~~~~~ 103 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEGAQE 103 (108)
T ss_dssp EC----CEEEEEEEEEEC---
T ss_pred EEeCCCceEEEEEEEEeCCCc
Confidence 999999999999999987643
No 479
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.45 E-value=2.1e-13 Score=116.54 Aligned_cols=92 Identities=17% Similarity=0.328 Sum_probs=78.4
Q ss_pred CCCe-eeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC--CeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 502 QRPV-FTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS--RITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 502 ~~P~-f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~--~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
++|. |...+.+. .+.+|+.+.|.|.+ .+ |.+.|.|+|||..+..+. ++.+..++....|.|.+++.+|+|.|+
T Consensus 5 ~~p~~~~~~~~~~-~v~~G~~v~l~C~~--~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 80 (103)
T 1x44_A 5 SSGIMVTKQLEDT-TAYCGERVELECEV--SE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYS 80 (103)
T ss_dssp CSSCCCSBCCCCE-EEETTEEEEEEEEC--SS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEE
T ss_pred CCCceeeccCCCE-EEECCCCEEEEEEe--cC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEE
Confidence 3454 77777776 68999999999998 66 779999999999998887 678888887789999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEeccc
Q psy2145 579 CKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
|.|.| ...++.|.|...|.
T Consensus 81 C~a~n----~~~~~~l~V~~~p~ 99 (103)
T 1x44_A 81 VMTTG----GQSSAKLSVDLKSG 99 (103)
T ss_dssp EEETT----EEEEEEEEEECCCS
T ss_pred EEECC----CcEEEEEEEeCCCC
Confidence 99988 57778888887543
No 480
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.45 E-value=2.5e-13 Score=114.08 Aligned_cols=88 Identities=22% Similarity=0.418 Sum_probs=77.1
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEE
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRA 260 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 260 (808)
..||.|...+....+.+|+++.|.|.+. +.| +.|.|+|+|..+..+.++.+.. + .|.|.+++.+|+|.|+|.|
T Consensus 7 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~--g~p-p~i~W~k~g~~~~~~~~~~~~~--~--~L~i~~~~~~D~G~Y~C~a 79 (95)
T 2ckn_A 7 AQPWGVPVEVESLLVHPGDLLQLRCRLR--DDV-QSINWLRDGVQLVESNRTRITG--E--EVEVRDSIPADSGLYACVT 79 (95)
T ss_dssp SCSCCBTTBBCCEEECTTSCEEEECCEE--SSC-CEEEEEBTTBCCCCCSSEEECS--S--EEEESSCCGGGSEEEEEEE
T ss_pred CCCCEEEcCcceEEEcCCCeEEEEEECC--CCC-CceEEEECCEecCCCCCEEEeC--C--EEEECCCChHHCEEEEEEe
Confidence 4678888889999999999999999994 666 6999999999998877776542 2 8999999999999999999
Q ss_pred EeCceeEEEEEEEEE
Q psy2145 261 VNALGQAVTSGNLLV 275 (808)
Q Consensus 261 ~n~~g~~~~~~~l~V 275 (808)
.|..|....++.|.|
T Consensus 80 ~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 80 SSPSGSDTTYFSVNV 94 (95)
T ss_dssp EETTEEEEEEEEEEE
T ss_pred ccCCCcEEEEEEEEE
Confidence 999999888888876
No 481
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.45 E-value=3.6e-13 Score=114.92 Aligned_cols=83 Identities=22% Similarity=0.270 Sum_probs=69.6
Q ss_pred cCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEE--eeC---cEEEEEECCCCCCCCEEEEEEEEeCCeeEEEE
Q psy2145 517 EEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTK--HDF---GYVAMDLSHVRAEDEGIYICKATNALGEAVTT 591 (808)
Q Consensus 517 ~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~--~~~---~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~s 591 (808)
..|+.+.|.|.+ .|.|.|.|+|+|||+.|..+.++... ..+ ...+|.|.++..+|+|.|+|.|.|..|..+.+
T Consensus 14 ~~~~~~~~~c~v--~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~ 91 (103)
T 1wwb_X 14 TSDHHWCIPFTV--KGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91 (103)
T ss_dssp CCCCEEEEEEEE--ECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEE
T ss_pred eECcEEEEEEEE--EEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEE
Confidence 468899999999 89999999999999999887664222 111 12359999999999999999999999999999
Q ss_pred EEEEEEeccc
Q psy2145 592 ASMKIKTKAG 601 (808)
Q Consensus 592 ~~l~V~~~~~ 601 (808)
+.|.|...|.
T Consensus 92 ~~l~V~~~P~ 101 (103)
T 1wwb_X 92 ISAHFMGWPG 101 (103)
T ss_dssp EEECCSCCCC
T ss_pred EEEEECCCCC
Confidence 9999987654
No 482
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.45 E-value=3.5e-14 Score=125.71 Aligned_cols=97 Identities=24% Similarity=0.370 Sum_probs=81.1
Q ss_pred ccCCCeEEeecCCCccccCCceEEEEEEEeeCCCCCeE-EEEEECCEEccC--CCcEEEE--EeCC--EEEEEEccCCCC
Q psy2145 632 QYEKPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMR-FEWFVNGVELKM--GSRFHVQ--HDFG--YVTLDITKCVPA 704 (808)
Q Consensus 632 ~~~~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~-i~W~~~g~~l~~--~~~~~~~--~~~~--~~~L~I~~v~~~ 704 (808)
...+|.|.. + ....+.+|+.+.|.|.+ .|.|.|. |.|+++|..|.. ..++.+. ...+ .++|.|.++..+
T Consensus 11 V~~~P~i~~-~-~~~~~~~G~~v~l~C~~--~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (122)
T 2cry_A 11 VNGPPIISS-T-QTQHALHGEKGQIKCFI--RSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 86 (122)
T ss_dssp CCSSCCEEE-E-CCCCCCTTSCCCCCEEE--CCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred EecCCCccC-C-CeEEEecCCCEEEEEEE--eecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence 335677776 3 44679999999999999 8999986 999999999986 4677763 2233 679999999999
Q ss_pred Cc-EEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 705 DS-GVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 705 D~-G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
|+ |.|+|.|.|.+|.+..++.|.|..++
T Consensus 87 D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 87 DFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp HHHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred hCCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 99 99999999999999999999997654
No 483
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=5.4e-14 Score=122.98 Aligned_cols=95 Identities=24% Similarity=0.419 Sum_probs=81.4
Q ss_pred CeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEE-EeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 636 PIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQ-HDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 636 P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+.|...+. ...+.+|+.++|.|.+ .|.|.|.|.|||||..|..+.++.+. .+++.++|.|.++..+|+|.|+|.
T Consensus 14 ~~~~~~~~-~~~v~~G~~v~l~C~~--~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-- 88 (115)
T 2cr6_A 14 VHIIEDLE-DVDVQEGSSATFRCRI--SPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE-- 88 (115)
T ss_dssp CEEEECCC-EEEEETTSCEECCCEE--ESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE--
T ss_pred CeEeccCc-cEEEeCCCcEEEEEEE--cCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE--
Confidence 35555554 4679999999999999 79999999999999999988888776 346677899999999999999999
Q ss_pred eCCcceEEEEEEEEEeCCCcccc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDIVSE 737 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~~~~ 737 (808)
+|....++.|.|..+|.++..
T Consensus 89 --~g~~~~~~~L~V~~~p~~~~~ 109 (115)
T 2cr6_A 89 --AGDQRASAALRVTEKPSVFSR 109 (115)
T ss_dssp --ETTEECCEEEEEECCSSCCSS
T ss_pred --ECCeeEEEEEEEECCCceecc
Confidence 688899999999999887544
No 484
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=4.1e-13 Score=114.99 Aligned_cols=92 Identities=18% Similarity=0.261 Sum_probs=78.7
Q ss_pred CCCCeEEeecCceeecCCCeEEEEEEEeecCCCCeEEEEeeCCEEccCCC----------ceEEEecCceEEEEEccCCC
Q psy2145 181 TQAPIFTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFHNNVPIKSGS----------RFTETNNFGFVALDIMQCLP 250 (808)
Q Consensus 181 ~~~P~~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~~g~~l~~~~----------~~~~~~~~~~~~L~I~~~~~ 250 (808)
..+|.|...+.+..+.+|++++|.|.+. + .+.+.|||||++|..+. ++.+..++..++|.|.+++.
T Consensus 6 ~p~~~~~~~l~d~~v~eG~~a~f~C~vs--~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~ 81 (112)
T 2e6q_A 6 SGTARLVAGLEDVQVYDGEDAVFSLDLS--T--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH 81 (112)
T ss_dssp CSCCCEEECCCCEEEETTCEEEEEEEES--S--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred cCCcEEecCCCCeEEcCCCcEEEEEEEC--C--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence 3468899999999999999999999993 4 66899999999999887 88888888888999999999
Q ss_pred CCcEEEEEEEEeCceeEEEEEEEEEeeCC
Q psy2145 251 EDSGVYTCRAVNALGQAVTSGNLLVHSKK 279 (808)
Q Consensus 251 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 279 (808)
+|+|.|+|...+ ...+++.|.|..+|
T Consensus 82 ~D~G~Y~~~~~~---~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 82 QDSGALVGFSCP---GVQDSAALTIQESS 107 (112)
T ss_dssp TTCSEEEEEEET---TEEEEEEEEEECSS
T ss_pred HHCccEEEEEEC---CeeEEEEEEEeCCC
Confidence 999999774433 45678999998754
No 485
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=2.3e-13 Score=116.37 Aligned_cols=93 Identities=22% Similarity=0.427 Sum_probs=81.7
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..||.|..++.+. .+.+|+.+.|.|.+ .+ |.+.|.|+|+|..+..+.++.+..++....|.|.+++.+|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~~-~v~~G~~v~l~C~~--~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (103)
T 2edf_A 6 SGPAAIIKPLEDQ-WVAPGEDVELRCEL--SR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCE 81 (103)
T ss_dssp CCCCCEEECCCCE-EECTTSCEEECCEE--SS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEE
T ss_pred CCCcEEEecCCcc-EEcCCCCEEEEEEE--eC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEE
Confidence 4578888888886 68999999999999 66 88899999999999988899888888888999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEeccc
Q psy2145 581 ATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~~~~ 601 (808)
|.| ...++.|.|...|.
T Consensus 82 a~n----~~~~~~l~V~~~p~ 98 (103)
T 2edf_A 82 VEA----SKSTASLHVEEKAS 98 (103)
T ss_dssp CSS----CEEEEEEEECCCSS
T ss_pred Ecc----CCcEEEEEEeCCCC
Confidence 999 36778888887553
No 486
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=8.5e-14 Score=120.71 Aligned_cols=98 Identities=28% Similarity=0.497 Sum_probs=84.2
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEE-eeCcEEEEEECCCCCCCCEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTK-HDFGYVAMDLSHVRAEDEGIYIC 579 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~-~~~~~~~L~I~~v~~~D~G~Y~C 579 (808)
..+|.|...+.+. .+.+|+.+.|.|.+ .|.|.+.|.|+|+|..+....+.... ...+..+|.|.+++.+|+|.|+|
T Consensus 7 ~~~P~i~~~~~~~-~v~~G~~v~l~C~~--~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm3_A 7 GFRPHFLQAPGDL-TVQEGKLCRMDCKV--SGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTC 83 (110)
T ss_dssp CCCCEEEECCCEE-EEESSSCBCCEEEE--ECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCE
T ss_pred CCCCcEEeCCCcE-EEeCCCEEEEEEEE--EEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEE
Confidence 4588999888776 68999999999999 79999999999999999876654433 34455689999999999999999
Q ss_pred EEEeCCeeEEEEEEEEEEeccc
Q psy2145 580 KATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 580 ~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
.|.|..|..+.++.|.|...+.
T Consensus 84 ~a~n~~g~~~~~~~l~V~~~p~ 105 (110)
T 2dm3_A 84 IATNRAGQNSFSLELVVAAKES 105 (110)
T ss_dssp EEECSSCEEEECCEEEEECCCC
T ss_pred EEECCCCEEEEEEEEEEeCCCC
Confidence 9999999999999999987653
No 487
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.44 E-value=2.8e-12 Score=120.40 Aligned_cols=161 Identities=12% Similarity=0.090 Sum_probs=106.3
Q ss_pred EEeecCceeecCCCeEEEEEEEeecCCCCeEEEEee--CCEEccCCCceEEEecCceEEEEEccCCCCCcEEEEEEEEeC
Q psy2145 186 FTTSLKNCEIKEGQRAHFECRLIPVSDNTMKVEWFH--NNVPIKSGSRFTETNNFGFVALDIMQCLPEDSGVYTCRAVNA 263 (808)
Q Consensus 186 ~~~~~~~~~v~~G~~v~L~C~~~~~~~p~~~v~W~~--~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~ 263 (808)
+.+.|++..|.+|+++.|.|.+. ...+..+.|.- ++..+. ....+...|.|.+++. | |.|.|.+.+.
T Consensus 2 v~v~P~~~~V~~G~Sv~l~Cs~~--c~~p~~~~~~t~l~~~~~~-------~~~~~~~~l~l~~vs~-~-g~y~C~~~c~ 70 (185)
T 1iam_A 2 TSVSPSKVILPRGGSVLVTCSTS--CDQPKLLGIETPLPKKELL-------LPGNNRKVYELSNVQE-D-SQPMCYSNCP 70 (185)
T ss_dssp EEEESSEEEEETTEEEEEEEEEC--SSSCSEEEEECSSCEEEEC-------SSSSSEEEEEEEEECS-C-BCCEEEEECS
T ss_pred eEEECCCcEEeCCCCEEEEEEcc--CCCCccceEEeeCCCccEe-------ccCCceeEEEEEecCc-C-CEEEEEEECC
Confidence 34566778899999999999993 33333467753 111110 1112334689999973 4 9999999776
Q ss_pred ceeEEEEEEEEEeeCCcccccccccchhhhhhhhhccccccccccccccCCCCeeccCCCceEeecCCeEEEEEEEeecC
Q psy2145 264 LGQAVTSGNLLVHSKKSIQTETQHGESLSRLQQLEQGRYQRTSIIEDTVSQAPVFTQPMRDIHVAENQAAHFEARLIPVG 343 (808)
Q Consensus 264 ~g~~~~~~~l~V~~~~~i~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~~~l~C~~~~~g 343 (808)
.......+.|+|..+| ......+....+.+|+.++|.|.+. .+
T Consensus 71 ~~~~~~~~~l~V~~~P------------------------------------~~v~i~~~~~~~~~G~~~tL~C~v~-g~ 113 (185)
T 1iam_A 71 DGQSTAKTFLTVYWTP------------------------------------ERVELAPLPSWQPVGKQLTLRCQVE-GG 113 (185)
T ss_dssp SCEEEEECEEEEEBCC------------------------------------SEEEECCCCSEECTTSEEEEEEEEE-CC
T ss_pred CCceEEEEEEEEeCCC------------------------------------CCCEEccCCccccCCCcEEEEEEcC-Cc
Confidence 4556677888887543 2222333344588999999999994 44
Q ss_pred CCc--cEEEEEECCEeccCCCcEEEEeeCcEEEEEEccCCCCCCeEEEEEEEcCCc
Q psy2145 344 DSK--LKVTWLRNGVPIQASNRVSTMHDFGYVALNFKYTYPEDSGTYTCRAVNELG 397 (808)
Q Consensus 344 ~p~--~~v~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~g 397 (808)
.|. +.|+|||+++.+.... ...+....+|.+.....+|.+.|+|+|.|..+
T Consensus 114 ~P~~~l~i~w~kg~~~l~~~~---~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 114 APRAQLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp BCGGGEEEEEEETTEEEEEEE---CCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred cCCCCcEEEEEeCCEEccccc---CCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 666 4699999999886421 11122334677776655556699999999876
No 488
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.44 E-value=1.8e-13 Score=116.99 Aligned_cols=93 Identities=25% Similarity=0.380 Sum_probs=81.5
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+. ...+.+|+.+.|.|.+ |.|.+.|.|+|||..|..+.++.+..+++.+.|.|.++..+|+|.|+|.
T Consensus 8 pp~~~~~~~-~~~v~~G~~v~l~C~~---~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2dku_A 8 ANCFTEELT-NLQVEEKGTAVFTCKT---EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD-- 81 (103)
T ss_dssp CCCCSSCCC-CEEEETTSEEEEEEEC---SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE--
T ss_pred CCEeEecCC-cEEEeCCCcEEEEEEe---CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE--
Confidence 356655554 3678999999999985 8899999999999999999999998888899999999999999999998
Q ss_pred eCCcceEEEEEEEEEeCCCcc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~~ 735 (808)
+|....++.|.|..+|..+
T Consensus 82 --~g~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 82 --IGQAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp --CSSCBCCEEEEEECSCCCC
T ss_pred --eCCceEEEEEEEeCccCCC
Confidence 8888999999999887543
No 489
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=6.9e-14 Score=119.09 Aligned_cols=91 Identities=21% Similarity=0.291 Sum_probs=78.5
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCC----CeEEEeeCcEEEEEECCCCCCCCEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSS----RITTKHDFGYVAMDLSHVRAEDEGI 576 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~----~~~~~~~~~~~~L~I~~v~~~D~G~ 576 (808)
..||.|..++.+. .+.+|+.+.|.|.+ .+.| +.+.|+|||..+..+. ++.+..+++...|.|.++..+|+|.
T Consensus 6 ~~p~~~~~~~~~~-~v~~G~~v~l~C~~--~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 81 (101)
T 2edk_A 6 SGPVLIVTPLEDQ-QVFVGDRVEMAVEV--SEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGR 81 (101)
T ss_dssp CCCCCEEECCCCE-EEESSCCCBCCEEE--SCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSB
T ss_pred cCCCEEEecCCce-EEcCCCCEEEEEEE--eCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEE
Confidence 4578898888886 78999999999999 7888 9999999999998776 6688888888899999999999999
Q ss_pred EEEEEEeCCeeEEEEEEEEEEec
Q psy2145 577 YICKATNALGEAVTTASMKIKTK 599 (808)
Q Consensus 577 Y~C~a~N~~G~~~~s~~l~V~~~ 599 (808)
|+|.|.| ...++.|.|..+
T Consensus 82 Y~C~a~n----~~~~~~l~V~~~ 100 (101)
T 2edk_A 82 YQVITNG----GQCEAELIVEEK 100 (101)
T ss_dssp EEEECSS----CEECCBEEEECC
T ss_pred EEEEEcC----CcEEEEEEEeCC
Confidence 9999988 345677888754
No 490
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.44 E-value=1.2e-13 Score=118.00 Aligned_cols=93 Identities=23% Similarity=0.424 Sum_probs=81.6
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEE
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAI 714 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~ 714 (808)
+|.|...+.. ..+.+|+++.|.|.+ .|.|.+ |.|+|||..+..+.++.+..++..++|.|.++..+|+|.|+|.
T Consensus 8 pp~~~~~~~~-~~v~~G~~v~l~C~~--~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~-- 81 (103)
T 2e7b_A 8 PVRFQEALKD-LEVLEGGAATLRCVL--SSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS-- 81 (103)
T ss_dssp CCCCTBCCCC-EEEESSSCEEEEEEC--SSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE--
T ss_pred CCEEEecCcc-EEEECCCcEEEEEEE--eCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE--
Confidence 4666555443 678999999999999 799999 9999999999989999999888889999999999999999998
Q ss_pred eCCcceEEEEEEEEEeCCCcc
Q psy2145 715 NRAGEAVSSTSLKVKSKSDIV 735 (808)
Q Consensus 715 N~~G~~~~s~~l~V~~~p~~~ 735 (808)
+|....++.|.|..+|..+
T Consensus 82 --~g~~~~~~~l~V~~~p~~~ 100 (103)
T 2e7b_A 82 --FGDQTTSATLTVTALPSGP 100 (103)
T ss_dssp --CSSCBCCBCEEEECCCCCS
T ss_pred --ECCcEEEEEEEEEeccccc
Confidence 7888889999999887543
No 491
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.44 E-value=3e-12 Score=134.07 Aligned_cols=175 Identities=15% Similarity=0.157 Sum_probs=112.7
Q ss_pred ceeecCCCCccccCCCCcEEEEEEEeeCC------------CCCceEEEEe--CCE--Ee-e--ccC----------cEE
Q psy2145 50 YYTVTKPKSIENLRERGHAHFECKLEPVT------------DSNLKVEWFK--NGR--PV-T--IGH----------RFR 100 (808)
Q Consensus 50 ~~~~~~p~~~~~v~~G~~v~l~C~~~~~~------------~p~~~v~W~~--~g~--~l-~--~~~----------r~~ 100 (808)
..++..+..+ .+.+|++++|.|...... .....|.||+ .|+ .+ . .+. +..
T Consensus 159 f~V~tq~~sv-~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~ 237 (401)
T 3f8u_B 159 LTVLTHTPAP-RVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVA 237 (401)
T ss_dssp EEEEESCSSC-EEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEE
T ss_pred EEEeCCCCcE-EEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEE
Confidence 4455667777 999999999999997421 0146799997 232 11 1 111 111
Q ss_pred EE---------eeCCeEEEEEcccCcCCCeeEEEEEEecCcceEEEEEEEEecCCCccccccccccceeeeeeccccccc
Q psy2145 101 PI---------HDFGYVALDIIDTIPEDSGTYTCRAVNLVGFAEVQATLQCRGSAGILTSTQNETGLEQIQYLEDKSKYQ 171 (808)
Q Consensus 101 ~~---------~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (808)
.. ...++.+|.|.+++.+|+|.|.|.+.+..+.....+.|.|.
T Consensus 238 f~~~~~~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~---------------------------- 289 (401)
T 3f8u_B 238 FAAWDDDEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVY---------------------------- 289 (401)
T ss_dssp EEEESCCCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEE----------------------------
T ss_pred EEeecccccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeec----------------------------
Confidence 11 12356799999999999999999999988877777777774
Q ss_pred cccccccccCCCCeEEeecCcee-ecCCC-eEEEEEEEeecCCCC--eEEEEe-eCC---EEccCCCc----eEEEecCc
Q psy2145 172 RGEYIEETTTQAPIFTTSLKNCE-IKEGQ-RAHFECRLIPVSDNT--MKVEWF-HNN---VPIKSGSR----FTETNNFG 239 (808)
Q Consensus 172 ~~~~~~~~~~~~P~~~~~~~~~~-v~~G~-~v~L~C~~~~~~~p~--~~v~W~-~~g---~~l~~~~~----~~~~~~~~ 239 (808)
.+|.+...+.... +..|+ .++|.|.+.+ ..|. +.|+|+ +|+ ..+..... ......+|
T Consensus 290 ----------~pP~V~v~p~~~~~~~~G~~~vtL~C~a~G-fyP~~~~~VtW~~rdg~~g~~~~~~~~~~~s~~~~~~DG 358 (401)
T 3f8u_B 290 ----------KPPKVSLMPATLARAAPGEAPPELLCLVSH-FYPSGGLEVEWELRGGPGGRSQKAEGQRWLSALRHHSDG 358 (401)
T ss_dssp ----------BCCEEEEESSSCCCCCTTCCCCCEEEEEEE-EBSSTTCEEEEEEESSSSCSCEECCSEEEECCCEECTTS
T ss_pred ----------cCCeEeeccCcceeecCCCccEEEEEEecC-CcCCCCcEEEEEecCCCCCceecccccccccccccCCCc
Confidence 3566766665544 46787 8999999964 3454 799995 875 22221110 01112223
Q ss_pred e----EEEEEccCCCCCc-EEEEEEEEeCc
Q psy2145 240 F----VALDIMQCLPEDS-GVYTCRAVNAL 264 (808)
Q Consensus 240 ~----~~L~I~~~~~~D~-G~Y~C~a~n~~ 264 (808)
. .+|.|...+.+|. +.|+|++.|..
T Consensus 359 TysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 359 SVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp CEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred eEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 2 2466655543344 59999999964
No 492
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.44 E-value=1.7e-12 Score=113.01 Aligned_cols=94 Identities=27% Similarity=0.477 Sum_probs=81.7
Q ss_pred CccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 499 ATKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 499 ~~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
+...||.|...+.+. .+.+|+++.|.|.+ .+. |.+.|+|||..|..+.++.+..+++...|.|.++..+|+|.|+
T Consensus 15 V~~~pp~~~~~~~~~-~v~~G~~v~l~C~~--~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
T 2edh_A 15 VRALPIKFTEGLRNE-EATEGATAVLRCEL--SKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYL 89 (113)
T ss_dssp CCCSCCCEEECCCCC-EECTTSCEEEEEEE--SSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEE
T ss_pred EEcCCCcccccCCce-EEeCCCeEEEEEEE--CCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEEE
Confidence 334567898888877 79999999999999 565 6799999999999889999988888889999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEEeccc
Q psy2145 579 CKATNALGEAVTTASMKIKTKAG 601 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~~~~~ 601 (808)
|.| |....++.|.|...|.
T Consensus 90 C~a----~~~~~~~~l~V~~~p~ 108 (113)
T 2edh_A 90 CMC----GKERTSAMLTVRAMPS 108 (113)
T ss_dssp EEE----TTEEEEEEEEECCCCC
T ss_pred EEe----CCCCEEEEEEEeCCCC
Confidence 999 7788889999987653
No 493
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=2.1e-13 Score=115.53 Aligned_cols=81 Identities=25% Similarity=0.469 Sum_probs=71.5
Q ss_pred ccccCCceEEEEEEEeeCCCCCeEEEEEECCEEccCCCcEEEEEeCCEEEEEEccCCCCCcEEEEEEEEeCCcceEEEEE
Q psy2145 646 SEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGVELKMGSRFHVQHDFGYVTLDITKCVPADSGVYMCKAINRAGEAVSSTS 725 (808)
Q Consensus 646 ~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~s~~ 725 (808)
..+.+|+.++|.|.+ .|.| |.|.|+|+|..+..+.++.+. + ..|.|.++..+|+|.|+|.|.|..|....++.
T Consensus 13 ~~v~~G~~v~L~C~~--~g~p-p~i~W~k~g~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 85 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRL--RDDV-QSINWLRDGVQLAESNRTRIT--G--EEVEVQDSVPADSGLYACVTSSPSGSDTTYFS 85 (99)
T ss_dssp CCBCTTSCEEEECCC--CSSC-CEEEEEESSSBCCCCSSEEEC--S--SEEEETTCCTTTCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCcEEEEEEe--cCCC-CeEEEEECCEECCCCCcEEEE--C--CEEEEccCCHHHCEEEEEEEEeCCceEEEEEE
Confidence 467899999999998 7887 799999999999888787765 2 38999999999999999999999999999999
Q ss_pred EEEEeCCC
Q psy2145 726 LKVKSKSD 733 (808)
Q Consensus 726 l~V~~~p~ 733 (808)
|.|...+.
T Consensus 86 l~V~~~~~ 93 (99)
T 2cr3_A 86 VNVSDALP 93 (99)
T ss_dssp ECBCSCCS
T ss_pred EEEecCCC
Confidence 99987654
No 494
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.43 E-value=2.3e-13 Score=117.05 Aligned_cols=92 Identities=21% Similarity=0.363 Sum_probs=80.9
Q ss_pred cCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEE
Q psy2145 501 KQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICK 580 (808)
Q Consensus 501 ~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 580 (808)
..+|.|..++.+. .+.+|+.+.|.|.+ .+.|.+ +.|+|||..+..+.++.+..++....|.|.++..+|+|.|+|.
T Consensus 6 ~~~p~~~~~~~~~-~v~~G~~v~l~C~~--~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 81 (106)
T 2dlt_A 6 SGQLEVLQDIADL-TVKAAEQAVFKCEV--SDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFV 81 (106)
T ss_dssp CCCCCEEECCCCE-EEESSCCEECCCEE--SCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEE
T ss_pred CCCCEEecCCCCe-EEeCCCeEEEEEEE--cCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEE
Confidence 4578999988887 68999999999999 788887 9999999999988899888888888999999999999999999
Q ss_pred EEeCCeeEEEEEEEEEEe
Q psy2145 581 ATNALGEAVTTASMKIKT 598 (808)
Q Consensus 581 a~N~~G~~~~s~~l~V~~ 598 (808)
|.|. ....++.|.|..
T Consensus 82 a~n~--~~~~~~~l~V~~ 97 (106)
T 2dlt_A 82 PDGY--ALSLSAKLNFLE 97 (106)
T ss_dssp EETS--CCCCCBCEEEEC
T ss_pred EccC--CceEEEEEEEEE
Confidence 9998 555667777764
No 495
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.43 E-value=6.7e-13 Score=111.44 Aligned_cols=88 Identities=20% Similarity=0.329 Sum_probs=77.5
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCCeEEEeeCcEEEEEECCCCCCCCEEEEEEE
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSRITTKHDFGYVAMDLSHVRAEDEGIYICKA 581 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 581 (808)
..|.|..++.+. .+.+|+.+.|.|.+ +.|.+.|.|+|||..+..+.++.+..++...+|.|.+++.+|+|.|+|.|
T Consensus 7 ~~~~~~~~~~~~-~v~~G~~v~l~C~~---~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 7 PVSAFSKKPRSV-EVAAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCCCSBCCCCE-EEETTSCEEEEEEC---SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CCCeeEeCCCcE-EEeCCCcEEEEEEe---CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 357788877776 68999999999987 68889999999999999888998888888889999999999999999999
Q ss_pred EeCCeeEEEEEEEEEE
Q psy2145 582 TNALGEAVTTASMKIK 597 (808)
Q Consensus 582 ~N~~G~~~~s~~l~V~ 597 (808)
|....++.|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 667777888875
No 496
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.42 E-value=2.5e-13 Score=115.35 Aligned_cols=91 Identities=22% Similarity=0.488 Sum_probs=74.1
Q ss_pred CCCeeeecCC---CcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCCCC---eEEEeeCcEEEEEECCCCCCCCE
Q psy2145 502 QRPVFTKPLQ---NIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDSSR---ITTKHDFGYVAMDLSHVRAEDEG 575 (808)
Q Consensus 502 ~~P~f~~~~~---~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~~~---~~~~~~~~~~~L~I~~v~~~D~G 575 (808)
.+|.|+.++. ....+.+|+.+.|.|.+ .|.|.+.+.|+|+|..+....+ +...... .+|.|.+++.+|+|
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~--~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~G 78 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPA--GGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQH--WSLIMESVVPSDKG 78 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCE--EEESCCEEEEEETTEECCGGGSTTCCEEEGGG--TEEEECSCCGGGCE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEc--cccCCCEEEEEECCEEcccccccccEEEecCe--EEEEEccCCcCCCE
Confidence 4677876542 33468899999999999 7899999999999999876543 3333332 37999999999999
Q ss_pred EEEEEEEeCCeeEEEEEEEEE
Q psy2145 576 IYICKATNALGEAVTTASMKI 596 (808)
Q Consensus 576 ~Y~C~a~N~~G~~~~s~~l~V 596 (808)
.|+|.|.|..|....++.|.|
T Consensus 79 ~Y~C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 79 NYTCVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEEEEETTEEEEEEEEEEE
T ss_pred EEEEEEEeCCCEEEEEEEEEE
Confidence 999999999999998888877
No 497
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.42 E-value=7.4e-13 Score=114.21 Aligned_cols=94 Identities=18% Similarity=0.295 Sum_probs=75.8
Q ss_pred CCeEEeecCCCccccCCceEEEEEEEeeCCCCCeEEEEEECCE-Ecc-------CCCcEEEEEe-CCEEEEEEccCCCCC
Q psy2145 635 KPIFTQLLTGTSEIMEGQSAHYDCRVVPVGDPTMRFEWFVNGV-ELK-------MGSRFHVQHD-FGYVTLDITKCVPAD 705 (808)
Q Consensus 635 ~P~~~~~~~~~~~v~~G~~v~l~C~v~~~g~P~p~i~W~~~g~-~l~-------~~~~~~~~~~-~~~~~L~I~~v~~~D 705 (808)
.|.|...+.+ ..+.+|++++|.|.+ .|.|.+.|.|++++. .+. .+.++.+... .+..+|.|.++..+|
T Consensus 6 ~p~~~~~~~~-~~v~~G~~v~L~C~~--~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 6 SQGQFPLTQN-VTVVEGGTAILTCRV--DQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp --CCCEECCC-EEEETTSCEEEEEEE--SSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred CCCccccCCe-eEEEeCCcEEEEeEE--cCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 4666666553 678999999999999 799999999999875 222 2347776543 347799999999999
Q ss_pred cEEEEEEEEeCCcceEEEEEEEEEeCC
Q psy2145 706 SGVYMCKAINRAGEAVSSTSLKVKSKS 732 (808)
Q Consensus 706 ~G~Y~C~A~N~~G~~~~s~~l~V~~~p 732 (808)
+|.|+|.|.| .|..+.++.|.|..+|
T Consensus 83 ~G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred CeEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 9999999999 9999999999998775
No 498
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.42 E-value=5.3e-13 Score=113.92 Aligned_cols=91 Identities=20% Similarity=0.353 Sum_probs=78.3
Q ss_pred ccCCCeeeecCCCcccccCCCceEEEEEEeeCCCCCcEEEEEECCEecCCC-CCeEEEeeCcEEEEEECCCCCCCCEEEE
Q psy2145 500 TKQRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPTLKVEWFRNEKPLEDS-SRITTKHDFGYVAMDLSHVRAEDEGIYI 578 (808)
Q Consensus 500 ~~~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~~~v~W~k~g~~l~~~-~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 578 (808)
...+|.|+.++.+...+.+|+.+.|.|.+ +.|.+.|.|+|||..|..+ .++.+..+++...|.|.++..+|+|.|+
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~---~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQ 88 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC---SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE---cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEE
Confidence 45688999999885579999999999997 5888999999999999887 7888887887889999999999999999
Q ss_pred EEEEeCCeeEEEEEEEEEE
Q psy2145 579 CKATNALGEAVTTASMKIK 597 (808)
Q Consensus 579 C~a~N~~G~~~~s~~l~V~ 597 (808)
|.|. ....++.|.|.
T Consensus 89 C~a~----~~~~~~~l~V~ 103 (104)
T 1pd6_A 89 CVVG----GEKCSTELFVK 103 (104)
T ss_dssp EEET----TEEECCEEEEE
T ss_pred EEEC----CCcEEEEEEEe
Confidence 9993 45566777775
No 499
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=4.7e-13 Score=115.32 Aligned_cols=94 Identities=20% Similarity=0.325 Sum_probs=74.9
Q ss_pred CCCeeeecCCCcccccCCCceEEEEEEeeCCC---CCcEEEEEECCE-ecCC--CCCeEEEee--C----cEEEEEECCC
Q psy2145 502 QRPVFTKPLQNIDAVEEGKNAHFSCRLIPVGD---PTLKVEWFRNEK-PLED--SSRITTKHD--F----GYVAMDLSHV 569 (808)
Q Consensus 502 ~~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~---P~~~v~W~k~g~-~l~~--~~~~~~~~~--~----~~~~L~I~~v 569 (808)
..+.|+..+.++ .+.+|+.++|.|.+ .|. |.|.|.|||++. .+.. +.++.+... . ...+|.|.++
T Consensus 11 ~~~~f~~~P~~v-~V~eG~~v~L~C~v--~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 87 (118)
T 2edn_A 11 PTGVFLKKPDSV-SVETGKDAVVVAKV--NGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKV 87 (118)
T ss_dssp CSSSCSBCCCCC-EEETTSCEECCEEE--ETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSC
T ss_pred CcceEEECCCCe-EEeCCCCEEEEEEE--eccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeC
Confidence 356788888776 69999999999999 554 799999999752 2222 345554322 1 2468999999
Q ss_pred CCCCCEEEEEEEEeCCeeEEEEEEEEEEe
Q psy2145 570 RAEDEGIYICKATNALGEAVTTASMKIKT 598 (808)
Q Consensus 570 ~~~D~G~Y~C~a~N~~G~~~~s~~l~V~~ 598 (808)
..+|+|.|+|+|+|..|..++++.|.|..
T Consensus 88 ~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 88 VLGDRGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CTTTCSCEEEEEECSSCEEEEEECCEEEC
T ss_pred ChhhCEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 99999999999999999999999999986
No 500
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.41 E-value=1e-12 Score=113.24 Aligned_cols=92 Identities=15% Similarity=0.249 Sum_probs=73.2
Q ss_pred CCeeeecCCCcccccCCCceEEEEEEeeCCCCC---cEEEEEECCEecC---CCCCeEEEee------CcEEEEEECCCC
Q psy2145 503 RPVFTKPLQNIDAVEEGKNAHFSCRLIPVGDPT---LKVEWFRNEKPLE---DSSRITTKHD------FGYVAMDLSHVR 570 (808)
Q Consensus 503 ~P~f~~~~~~~~~v~~G~~v~l~C~v~~~g~P~---~~v~W~k~g~~l~---~~~~~~~~~~------~~~~~L~I~~v~ 570 (808)
.|.|+..+.++ .+.+|++++|.|.+ .|.|. +.|.|+|++.... ...++.+... .+...|.|.+++
T Consensus 4 ~p~f~~~p~~~-~v~~G~~v~L~C~~--~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 80 (108)
T 3cx2_A 4 IGLFVMRPQDG-EVTVGGSITFSARV--AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQ 80 (108)
T ss_dssp CCSCSBCCCCE-EEETTCCEEEEEEE--ECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCC
T ss_pred ccEEEeCCCcE-EEeCCCCEEEEEEE--CCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCC
Confidence 57888877776 68999999999999 78988 9999999873221 1235544321 124589999999
Q ss_pred CCCCEEEEEEEEeCCeeEEEEEEEEEE
Q psy2145 571 AEDEGIYICKATNALGEAVTTASMKIK 597 (808)
Q Consensus 571 ~~D~G~Y~C~a~N~~G~~~~s~~l~V~ 597 (808)
.+|+|.|+|.|.|..|..++++.|.|.
T Consensus 81 ~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 81 PAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CccCEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999999999986
Done!