RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy2148
(1884 letters)
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL
structural protein; 3.30A {Oryctolagus cuniculus}
Length = 570
Score = 316 bits (811), Expect = 5e-94
Identities = 125/621 (20%), Positives = 207/621 (33%), Gaps = 108/621 (17%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ P ++I W+K L + F + +L IN + D YTCKA N +G
Sbjct: 28 KVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAV 87
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
S+ L I++R P F L DV
Sbjct: 88 ASSAVLVIKER---------------------------------KLPPSFARKLKDVHET 114
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
V F+CR+ S L+V W+ +G+ + ++
Sbjct: 115 LGFPVAFECRINGS-------------------EPLQVSWYKDGELLKDDANLQTSFIHN 155
Query: 182 FVVMDIAYVQSHDSGEYVC-----------QWFVNNKPLPAGAKFKTTHDFGYVALDIEL 230
+ I G+Y C + F +AL
Sbjct: 156 VATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESG 215
Query: 231 MLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNS 285
K V W +N+ + G +K T L ++ D+G YT A+N
Sbjct: 216 TFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNV 275
Query: 286 KGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFL 345
G + S L E P F + + + + E +E + G + V +
Sbjct: 276 AGKDSCSAQLGVQEP-------PRFIKKLEPSRIVKQDEHTRYECKI--GGSPEIKVLWY 326
Query: 346 YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSK 405
+ I+ S + R + VLE+ +ED+G YTC A N G A S +L+ V
Sbjct: 327 KDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLK-VK--- 382
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
+PP F +E G H EC L P +V W + + + + K++S+
Sbjct: 383 -EPPVFRKKPHPVE-TLKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKKYKIMSENF 438
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLD 515
+ I V S D GEY C+A N+ + PP + S ++
Sbjct: 439 LTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPP-------RFVKK-LS--DIS 488
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGS-RVKTVYDFGFISLDMDYVYARDS 574
+V + + + + WF + S + Y +L ++
Sbjct: 489 TVVGEEVQLQATI--EGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANA 546
Query: 575 GEYICRATNKWGTAMTKAKVI 595
G+Y C+ N+ GT A +
Sbjct: 547 GKYTCQIKNEAGTQECFATLS 567
Score = 314 bits (805), Expect = 3e-93
Identities = 117/603 (19%), Positives = 209/603 (34%), Gaps = 107/603 (17%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W+ + L + +K +L I D G YT KA NS G+ +S L
Sbjct: 35 IRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLV 94
Query: 297 CLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHR 356
+ P F+ + + + + G FE G + + V + +G+ ++
Sbjct: 95 ----IKERKLPPSFARKLKDVH-ETLGFPVAFECR--INGSEPLQVSWYKDGELLKDDAN 147
Query: 357 IRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIK 416
++T + L+IL T G Y C A+N G A S L + PP F
Sbjct: 148 LQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLT-L-SEHEVPPFFDLKPV 205
Query: 417 SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQS 476
S++ G+S F+C +T +K+ W + + I KM + + V
Sbjct: 206 SVDLAL-GESGTFKCHVTG--TAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTK 262
Query: 477 HDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
D+G+Y C A N + PP R + + V + ++C
Sbjct: 263 GDAGQYTCYASNVAGKDSCSAQLGVQEPP---------RFIKKLEPSRIVKQDEHTRYEC 313
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
++ P +++ W+ + S+ + + L+M + DSG+Y C A N G
Sbjct: 314 KIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAG 371
Query: 587 TAMTKAKVI-------------------------CKVL---TVIVEWFYNGKKLPHGHRY 618
+A + + C++ V W + ++L G +Y
Sbjct: 372 SASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKY 431
Query: 619 RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGME 678
+ + + + IL + G Y+C+A+N GSD S+ +
Sbjct: 432 KIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSIT-L---------------- 474
Query: 679 GGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPK 738
+ P F LS+I GE +A +
Sbjct: 475 -------------------------KAPPRFVKKLSDI-STVVGEEVQLQATIEG--AEP 506
Query: 739 LKVEWFWNGKPMKTGS-RFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASM 797
+ V WF + + S L+ S P + G+Y+C+ N+ G A++
Sbjct: 507 ISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATL 566
Query: 798 KVQ 800
V
Sbjct: 567 SVL 569
Score = 304 bits (781), Expect = 4e-90
Identities = 120/612 (19%), Positives = 207/612 (33%), Gaps = 106/612 (17%)
Query: 106 FDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
+ P FI L VE E + C+V+ G PE+++ W+
Sbjct: 3 MEPPYFIEPLEHVEAAIGEPITLQCKVD---------G----------TPEIRIAWYKEH 43
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH---DFG 222
+ KM + I V D GEY C N GA +
Sbjct: 44 TKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTC--KAENS---VGAVASSAVLVIKER 98
Query: 223 YVALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVA 264
+ LK + W+ + + L A +T+
Sbjct: 99 KLPPSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVAT 158
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I+ G Y A+N G+A++S L L + P F L+ + L+ GE
Sbjct: 159 LQILQTDQSHVGQYNCSASNPLGTASSSAKLT----LSEHEVPPFFDLKPVSVD-LALGE 213
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 384
F+ G + + + + + I + L +L D G YTC
Sbjct: 214 SGTFKC--HVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCY 271
Query: 385 ATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVE 444
A+N G+ S L V + PP+F ++ +K + +EC + PE+KV
Sbjct: 272 ASNVAGKDSCSAQLG-VQE----PPRFIKKLEPSRIVKQDEHTRYECKIGG--SPEIKVL 324
Query: 445 WFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN--------FIFIPPF 496
W+ + I ++ +M V+++ + DSG+Y C A N + +
Sbjct: 325 WYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEP 384
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P+F P ++ + VH +C + P ++ W + R +G + K +
Sbjct: 385 PVFR------KKPH--PVETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKKYKIM 434
Query: 557 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI-------------- 602
+ S+ + V + D GEY C+A+N G+ + K
Sbjct: 435 SENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEE 494
Query: 603 --------------VEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
V WF + ++ + I L N+G Y C+
Sbjct: 495 VQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIK 554
Query: 648 NKYGSDVTKASL 659
N+ G+ A+L
Sbjct: 555 NEAGTQECFATL 566
Score = 296 bits (760), Expect = 2e-87
Identities = 123/780 (15%), Positives = 225/780 (28%), Gaps = 257/780 (32%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+PP F ++ +E G+ +C + PE+++ W+ + KM
Sbjct: 4 EPPYFIEPLEHVE-AAIGEPITLQCKVDG--TPEIRIAWYKEHTKLRSAPAYKMQFKNNV 60
Query: 467 VVMDIAYVQSHDSGEYVCRAWN---------NFIFIPPFPIFIFHQIRLPSPSQDNLDVP 517
+ I V D GEY C+A N + F + ++
Sbjct: 61 ASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFAR------KLKDVHET 114
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY 577
V F+CR +++ W+ +G + ++T + +L + G+Y
Sbjct: 115 LGFPVAFECR--INGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQY 172
Query: 578 ICRATNKWGTAMTKAKVI----------------------------CKVL---TVIVEWF 606
C A+N GTA + AK+ C V + + W
Sbjct: 173 NCSASNPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWA 232
Query: 607 YNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 666
+ +++ G Y+ L +L + ++G Y C A+N G D A L
Sbjct: 233 KDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLG------ 286
Query: 667 LILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAH 726
+Q P F L +++ E+
Sbjct: 287 -----------------VQE-------------------PPRFIKKLEPSRIVKQDEHTR 310
Query: 727 FEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYN 786
+E ++ P++KV W+ + ++ S+FR
Sbjct: 311 YECKIGG--SPEIKVLWYKDETEIQESSKFR----------------------------- 339
Query: 787 DYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEA 846
M +++ E+ + ED G Y+C A+N
Sbjct: 340 ----------MSFVESVAVL----------------EMYNLSVEDSGDYTCEAHNAA--- 370
Query: 847 VTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHERE 906
G+ L
Sbjct: 371 -------------------------GSASSSTSL-------------------------- 379
Query: 907 DRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK 966
+++E P F P + + H EC P V W + + L +G + K
Sbjct: 380 -KVKE----PPVFRKKPHPVETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKKYK 432
Query: 967 TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFAN 1026
+++ + I +V D G Y CKA+N G T +T+K
Sbjct: 433 IMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK----------------- 475
Query: 1027 ATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTM 1086
PP F +L D + +V + + +
Sbjct: 476 -------------------------APPRFVKKLSD-ISTVVGEEVQLQATI--EGAEPI 507
Query: 1087 RIDWFFNGRPFATGS-RVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ WF + S + Y +L ++G+Y C+ N+ GT A +
Sbjct: 508 SVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLS 567
Score = 292 bits (750), Expect = 5e-86
Identities = 129/642 (20%), Positives = 211/642 (32%), Gaps = 162/642 (25%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFINISTAF 1317
EPP FI +E V EP+ + +V+ + R+ + + + A+
Sbjct: 4 EPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTK-----------LRSAPAY 52
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
+ F SL I+ V D GEY C+A N G + A +
Sbjct: 53 KMQ-------------FKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVL------ 93
Query: 1378 TIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQL 1437
I+ E+K PP F ++K
Sbjct: 94 VIK---------------------------------------ERKLPPSFARKLKDV-HE 113
Query: 1438 VEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGE 1497
FEC+ G ++V W+ +G+ L + + G+
Sbjct: 114 TLGFPVAFECR--INGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQ 171
Query: 1498 YLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDE 1557
Y C A+N G + A L L E E
Sbjct: 172 YNCSASNPLGTASSSAKLT------------------------------------LSEHE 195
Query: 1558 KPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
P P F +P + + GE F VTG ++ W + I K+T E T
Sbjct: 196 VP---PFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENT 252
Query: 1618 --------EMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPCR-AFEQDQARFE 1660
G+ V A+ PP F KK++P R + + R+E
Sbjct: 253 ATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYE 312
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+ G P + W++++ I S F++ + ++L M + +EDSG + A N G
Sbjct: 313 CKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGS 372
Query: 1721 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNG 1780
A S +L V+ PP F G + ++ T P V W K+
Sbjct: 373 ASSSTSLKVK----------EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDK 422
Query: 1781 KKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGK 1840
+++ +YK + E+ L ++ I+ D G Y+C A N+ G C + ++
Sbjct: 423 RELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK------- 475
Query: 1841 QAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
P + L D + G V L+ I G
Sbjct: 476 ------------APPRFVKKLSDISTVVGEEVQLQATIEGAE 505
Score = 290 bits (743), Expect = 5e-85
Identities = 108/619 (17%), Positives = 202/619 (32%), Gaps = 126/619 (20%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P F +H+ + GE + + G + + + + ++ + +
Sbjct: 6 PYFIEPLEHVE-AAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNVAS 62
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L I D G YTC+A N G S L + K + PP F +K + G
Sbjct: 63 LVINKVDHSDVGEYTCKAENSVGAVASSAVLV-I-KERKLPPSFARKLKDVH-ETLGFPV 119
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
FEC + L+V W+ +G+ + ++ + I G+Y C A
Sbjct: 120 AFECRING--SEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSAS 177
Query: 488 NNFIFI-PPFPIFIFHQIRLPS--PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 544
N + + P ++D+ F C + ++I W +
Sbjct: 178 NPLGTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVT--GTAPIKITWAKDN 235
Query: 545 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI--------- 595
R G K +L + V D+G+Y C A+N G A++
Sbjct: 236 REIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIK 295
Query: 596 -----------------CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCY 635
CK+ + V W+ + ++ ++R + +L++
Sbjct: 296 KLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLS 355
Query: 636 EENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRR 695
E+SG Y C A N GS + SLK V
Sbjct: 356 VEDSGDYTCEAHNAAGSASSSTSLK-V--------------------------------- 381
Query: 696 TETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR 755
++ PVF + + +G + H E P +V W + + +++G +
Sbjct: 382 --------KEPPVFRKKPHPV-ETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKK 430
Query: 756 FRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ----- 810
++ + + I V D G+Y C+A ND G S+ ++ + +
Sbjct: 431 YKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTV 490
Query: 811 ----------------------------LPKGMEVFISFHE------ISPVYPEDCGQYS 836
+ + ++IS+ E S P + G+Y+
Sbjct: 491 VGEEVQLQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYT 550
Query: 837 CRAYNDYGEAVTSASMKVQ 855
C+ N+ G A++ V
Sbjct: 551 CQIKNEAGTQECFATLSVL 569
Score = 267 bits (685), Expect = 2e-77
Identities = 111/593 (18%), Positives = 191/593 (32%), Gaps = 137/593 (23%)
Query: 1259 EIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFL 1318
+ + PP F +++ V PV FE R+ L+V +
Sbjct: 96 KERKLPPSFARKLKDVHETLGFPVAFECRING--SEPLQVS-----------------WY 136
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
L F +L I G+Y C A N G A + A ++
Sbjct: 137 KDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLT------ 190
Query: 1379 IQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV 1438
L E E PP F + + L
Sbjct: 191 -------------------------------------LSEHEV--PPFFDLKPVSV-DLA 210
Query: 1439 EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEY 1498
+S F+C + G +K+ W + + + + + V D+G+Y
Sbjct: 211 LGESGTFKCHVT--GTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQY 268
Query: 1499 LCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEK 1558
C A+N+ G D A L V+
Sbjct: 269 TCYASNVAGKDSCSAQLG-------------------------------------VQ--- 288
Query: 1559 PKEAPVFVSQPE-AQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
E P F+ + E ++ V++ E R+ ++ G P +V+W + I +++ E+
Sbjct: 289 --EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESV 346
Query: 1618 --------EMEHKGKIQ---ERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEV 1661
+E G ++ PPVF KK P + E
Sbjct: 347 AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLEC 406
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
E G P + W ++ + S ++I + + + + + V D G + A N G
Sbjct: 407 ELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSD 466
Query: 1722 KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGK 1781
C ++ ++ PP F+ +S VG+ + A I +P+ V W K+
Sbjct: 467 TCVGSITLKA----------PPRFVKKLSDISTVVGEEVQLQATIEGAEPISVAWFKDKG 516
Query: 1782 KIIPD-IRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+I+ + +N+ TL A ++G Y C N AG C A L V
Sbjct: 517 EIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLSVL 569
Score = 261 bits (669), Expect = 3e-75
Identities = 93/481 (19%), Positives = 167/481 (34%), Gaps = 91/481 (18%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+PP F+ ++ + + +C++ G P +++ W+ L + +
Sbjct: 4 EPPYFIEPLEHV-EAAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNV 60
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
++ V D GEY C+A N G + A+L +I E +LP
Sbjct: 61 ASLVINKVDHSDVGEYTCKAENSVGAVASSAVL-------VIKERKLP------------ 101
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
P F + + G P F R+ G +V W +G
Sbjct: 102 --------------------PSFARKLKDVHETLGFPVAFECRINGSEPLQVSWYKDGEL 141
Query: 1603 IVNEIVRKITATETT--------EMEHKG--------KIQERVVDAS---EKPAKPPVFT 1643
+ ++ + + + H G + A + PP F
Sbjct: 142 LKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLTLSEHEVPPFFD 201
Query: 1644 KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 1703
K + F+ G I W +++ I ++++ + L + +V
Sbjct: 202 LKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVT 261
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS-SAVINVGQLARF 1762
D+G + A N GK CSA L V+E PP F+ + S ++ + R+
Sbjct: 262 KGDAGQYTCYASNVAGKDSCSAQLGVQE----------PPRFIKKLEPSRIVKQDEHTRY 311
Query: 1763 DAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG 1822
+ KI + + V W K+ +I +++ +++ L + VEDSG Y C A N AG
Sbjct: 312 ECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAG 371
Query: 1823 EARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
A L V+ E P + +G+ V L+C + G P
Sbjct: 372 SASSSTSLKVK-------------------EPPVFRKKPHPVETLKGADVHLECELQGTP 412
Query: 1883 R 1883
Sbjct: 413 P 413
Score = 248 bits (636), Expect = 6e-71
Identities = 104/602 (17%), Positives = 199/602 (33%), Gaps = 151/602 (25%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+++ + C+++ P +RI W+ + K + SL ++ V
Sbjct: 14 HVEAAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHS 71
Query: 573 DSGEYICRATNKWGTAMTKAKVI----------------------------CKVL---TV 601
D GEY C+A N G + A ++ C++ +
Sbjct: 72 DVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVAFECRINGSEPL 131
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
V W+ +G+ L +T + L IL + + G Y C A+N G+ + A L
Sbjct: 132 QVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPLGTASSSAKLT- 190
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
+ E ++P P F + ++D L
Sbjct: 191 ------LSEHEVP--------------------------------PFFDLKPVSVD-LAL 211
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYS 781
GE+ F+ +T +K+ W + + ++ G ++ L + V D GQY+
Sbjct: 212 GESGTFKCHVT--GTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYT 269
Query: 782 CRAYNDYGEAVTSASMKVQGK----------------RSIILE----------------- 808
C A N G+ SA + VQ E
Sbjct: 270 CYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDE 329
Query: 809 SQLPKGMEVFISFHE------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL 862
+++ + + +SF E + + ED G Y+C A+N G A +S S+KV+
Sbjct: 330 TEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRK 389
Query: 863 ESQLPKGMEGTIDKIA-ELEGYGH-----EREDRTI---DKIAELE-GYGH-------ER 905
+ + ++G + EL+G ++ R + K + + +
Sbjct: 390 KPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDS 449
Query: 906 ED------RIEEDLGKA-----------PEFLTTPTDLTLAESTLAHFECRLTPTNDPSM 948
D + D+G P F+ +D++ + + +
Sbjct: 450 ADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATI--EGAEPI 507
Query: 949 TVEWFHNGKAL-SAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLT 1007
+V WF + + I L+ + ++G YTC+ N+ G L+
Sbjct: 508 SVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQECFATLS 567
Query: 1008 VK 1009
V
Sbjct: 568 VL 569
Score = 220 bits (563), Expect = 2e-61
Identities = 92/532 (17%), Positives = 174/532 (32%), Gaps = 129/532 (24%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+ P F PL +++ GE + ++ P++++ W+ +++ ++
Sbjct: 4 EPPYFIEPLEHVE-AAIGEPITLQCKVDG--TPEIRIAWYKEHTKLRSAPAYKMQFKNNV 60
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR------------------SII 806
L I+ V D G+Y+C+A N G +SA + ++ ++ +
Sbjct: 61 ASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLPPSFARKLKDVHETLGFPVA 120
Query: 807 LE-----------------SQLPKGMEVFISFHE------ISPVYPEDCGQYSCRAYNDY 843
E L + SF I GQY+C A N
Sbjct: 121 FECRINGSEPLQVSWYKDGELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCSASNPL 180
Query: 844 GEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE----GY----------GHERED 889
G A +SA + + P ++ + + + G E
Sbjct: 181 GTASSSAKLTLSEHEVPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRP 240
Query: 890 RTIDKIAELEGYGH------ERED------RIEEDLGKA-----------PEFLTTPTD- 925
K+ +E + D GK P F+
Sbjct: 241 GGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPS 300
Query: 926 LTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRD 985
+ + +EC++ P + V W+ + + S+ + +LE+ ++ + D
Sbjct: 301 RIVKQDEHTRYECKIGG--SPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVED 358
Query: 986 SGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELI 1045
SG YTC+A N G A++S L VK
Sbjct: 359 SGDYTCEAHNAAGSASSSTSLKVKE----------------------------------- 383
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
PPVF + ++ + VH +C + P ++ W + R +G + K
Sbjct: 384 -------PPVFRKKPH-PVETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKKYKI 433
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQ 1157
+ + S+ + V + D GEY C+A+N G+ + KA V +
Sbjct: 434 MSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLS 485
Score = 181 bits (460), Expect = 5e-48
Identities = 82/488 (16%), Positives = 148/488 (30%), Gaps = 128/488 (26%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
E PP F + SV + E F+ V +++ + P N +
Sbjct: 194 HEVPPFFDLKPVSVDLALGESGTFKCHVTG--TAPIKITWAKDNREIRPGGNYKMTLVEN 251
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
+L + V D G+Y C A N G+ A + +Q
Sbjct: 252 T-----------------ATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL------GVQ 288
Query: 1381 LQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM 1440
+PPRF+ +++ + +
Sbjct: 289 ------------------------------------------EPPRFIKKLEPSRIVKQD 306
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
+ T++EC++ G P +KV W+ + + ++F + + + EDSG+Y C
Sbjct: 307 EHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTC 364
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
A N G + LK V K
Sbjct: 365 EAHNAAGSASSSTSLK-------------------------------------V-----K 382
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT--- 1617
E PVF +P + +G + G P +V W + + + KI +
Sbjct: 383 EPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSI 442
Query: 1618 -----EMEHKG--------KIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFD 1664
+ G + S PP F KK+ ++ + + +
Sbjct: 443 HILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIE 502
Query: 1665 GDPLPTIKWFREDFPI-TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 1723
G ++ WF++ I S + I + L + ++G + +N G +C
Sbjct: 503 GAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAGTQEC 562
Query: 1724 SANLVVEE 1731
A L V E
Sbjct: 563 FATLSVLE 570
Score = 145 bits (367), Expect = 4e-36
Identities = 62/314 (19%), Positives = 106/314 (33%), Gaps = 79/314 (25%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P +K+ W+K+ + S+ R +F + L + +L +DS YTC+A N G A S+
Sbjct: 317 GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSS 376
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
+LK+++ PVF + VE +
Sbjct: 377 TSLKVKEP------------------------------------PVFRKKPHPVETLKGA 400
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
+VH +C ++ G P +V W + + + + K++S+
Sbjct: 401 DVHLECELQ---------G----------TPPFQVSWHKDKRELRSGKKYKIMSENFLTS 441
Query: 185 MDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH-------DFGYVALDIELMLKTLVP 237
+ I V S D GEY C +N G+ F DI ++ V
Sbjct: 442 IHILNVDSADIGEYQC--KASND---VGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQ 496
Query: 238 FT-----------EWFVNNKPL-PAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNS 285
WF + + ++ L A ++G YT + N
Sbjct: 497 LQATIEGAEPISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNE 556
Query: 286 KGSATTSGTLKCLE 299
G+ TL LE
Sbjct: 557 AGTQECFATLSVLE 570
Score = 119 bits (299), Expect = 2e-27
Identities = 30/202 (14%), Positives = 63/202 (31%), Gaps = 56/202 (27%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
E + P ++ W K+ L G + + + L ++ I ++ + D Y CKA+N +G
Sbjct: 406 CELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGS 465
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
++ ++ P F+ L+D+
Sbjct: 466 DTCVGSITLKAP------------------------------------PRFVKKLSDIST 489
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI-FHKNRVKMVSD 179
E V +E + V WF + I + + +
Sbjct: 490 VVGEEVQLQATIE-------------------GAEPISVAWFKDKGEIVRESDNIWISYS 530
Query: 180 FGFVVMDIAYVQSHDSGEYVCQ 201
+ + + ++G+Y CQ
Sbjct: 531 ENIATLQFSRAEPANAGKYTCQ 552
Score = 116 bits (291), Expect = 1e-26
Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL 1797
G + PP F+ + +G+ K+ T + + W K K+ YK ++N+
Sbjct: 1 GAMEPPYFIEPLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNV 60
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTV 1857
+L+I + D G Y C A N+ G A LV++ +K P P+
Sbjct: 61 ASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKERKLP----------------PSF 104
Query: 1858 AEPLKDQNVKEGSAVTLKCRITGKP 1882
A LKD + G V +CRI G
Sbjct: 105 ARKLKDVHETLGFPVAFECRINGSE 129
Score = 79.5 bits (196), Expect = 4e-15
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PP F L+ ++ + C+++ P +RI W+ + K +
Sbjct: 5 PPYFIEPLEH-VEAAIGEPITLQCKVD--GTPEIRIAWYKEHTKLRSAPAYKMQFKNNVA 61
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELE 1171
SL ++ V D GEY C+A N G + A + ++ E +LP S + KLK++
Sbjct: 62 SLVINKVDHSDVGEYTCKAENSVGAVASSAVL-------VIKERKLPPSFA-RKLKDVH 112
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal
eight IG domains...; immunoglobulin domain; HET: NAG NDG;
4.19A {Drosophila melanogaster}
Length = 816
Score = 291 bits (745), Expect = 6e-83
Identities = 130/959 (13%), Positives = 241/959 (25%), Gaps = 267/959 (27%)
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
+ + + L+ L+ A G T + ++
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQK----------------------- 37
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NG 1094
PVF + + +D + +C+ +P I W +G
Sbjct: 38 -----------------GPVFLKEPTNRIDFSNSTGAEIECKAS--GNPMPEIIWIRSDG 78
Query: 1095 RPFATGSRVKTVYDFG--FIS--LDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKH 1150
++ + G DY + Y C A N++G+ +++ +
Sbjct: 79 TAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVA 138
Query: 1151 DIVTESQLPDSMSAE---------KLKELEKNYTPEEIE---EDEIPEEPPRLNQSRYKK 1198
+ + ++ + ++E P +Y
Sbjct: 139 QYYEAD--VNKEHVIRGNSAVIKCLIPSFVADFVEV-VSWHTDEEENYFPGAEYDGKYLV 195
Query: 1199 QNQSAWYDSELSE------YQKERANESTELEKHDIVTESQLPDSMSAEKLKELEKNYTP 1252
+ E+ YQ + T +
Sbjct: 196 LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRL---------------------SATKG 234
Query: 1253 EEIEEDEIPEEPPRFIT--EIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPF 1310
+ + I P+ ++ + + T + + C A +P
Sbjct: 235 RLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALL--------------C---PAQGYPV 277
Query: 1311 INISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
I + + +L I ED G+Y+C N G +
Sbjct: 278 PVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETV 337
Query: 1371 ISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQ 1430
+ T+ P
Sbjct: 338 L------TVT------------------------------------------APLSAKID 349
Query: 1431 IKTQDQLVEMQST-KFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW 1489
Q V+ F CQ G+P V W +GK + H I
Sbjct: 350 P--PTQTVDFGRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSESVLRIES---------- 395
Query: 1490 VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHT 1549
V ED G Y C N E A LK
Sbjct: 396 VKKEDKGMYQCFVRNDRESAEASAELK--------------------------------- 422
Query: 1550 PEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVR 1609
+ PV + + ++ G G P P + W ++G I N
Sbjct: 423 ----LGGRFD--PPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRY 476
Query: 1610 KITATETTEMEHKG--KIQE-RVVDA-------------SEKPAK-----PPVFTKKIQP 1648
++ T + I D +E AK P + ++
Sbjct: 477 QVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIRQ-MEK 535
Query: 1649 CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSG 1708
+ G P+ +I W R++ + + ++ F +++I D
Sbjct: 536 KAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKV--FPNGTLIIENVERNSDQA 593
Query: 1709 VFAVIAENRGGK-AKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKI 1766
+ +A+N+ G A+ S + V V P + VGQ +
Sbjct: 594 TYTCVAKNQEGYSARGSLEVQVM----------VLPRIIPFAFEEGPAQVGQYLTLHCSV 643
Query: 1767 SAT-KPLDVYWLKNGKKIIPDIRYK-TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEA 1824
PL++ W +G+ I D+ + L I +G + C A N AG
Sbjct: 644 PGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQ 703
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ L V P D+ +GS ++C+ G P+
Sbjct: 704 QFTTPLNVY-------------------VPPRWILEPTDKAFAQGSDAKVECKADGFPK 743
Score = 288 bits (739), Expect = 3e-82
Identities = 141/882 (15%), Positives = 243/882 (27%), Gaps = 232/882 (26%)
Query: 4 RADPNLKIEWFK-NGVPLSLGSRIRSTFDFGLVTLSINSLRADD------SAIYTCKATN 56
+P +I W + +G + +R G L RA+D + +Y C A N
Sbjct: 64 SGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARN 121
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLN 116
G +S VR + + +N
Sbjct: 122 QFGSIISRDV-----------------------------HVRAVVA------QYYEADVN 146
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIF-----HK 171
+ C + V D V W + + + +
Sbjct: 147 KEHVIRGNSAVIKCLIPSF----------------VADFVEVVSWHTDEEENYFPGAEYD 190
Query: 172 NRVKMVSDFGFVVMDIAYVQSHDS-GEYVCQ----------------WFVNNKPLPAGAK 214
+ ++ G + I V D Y C+ V +P+ +
Sbjct: 191 GKYLVLPS-GELH--IREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSAVP 247
Query: 215 FKTTHDFGY---VALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYV--A 264
+ + + L P W+ + V
Sbjct: 248 KVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGT 307
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I A EDSG Y NS G + L + + + G
Sbjct: 308 LIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA-------PLSAKIDPPTQT-VDFGR 359
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 384
A F G+ TV ++ +GK I S VL I K ED G+Y C
Sbjct: 360 PAVFTCQYT--GNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCF 407
Query: 385 ATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVE 444
N AE S L+ + + PP + ++ G S +C +P ++
Sbjct: 408 VRNDRESAEASAELK-LG-GRFDPPVIRQAFQEET-MEPGPSVFLKCV--AGGNPTPEIS 462
Query: 445 WFHNGKPIFHKNRVKM-----VSDFGFVVMDIAYVQSHDSGEYVCRAWNNF--------- 490
W +GK I + +R ++ V+ ++I V ++D G Y C A +
Sbjct: 463 WELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKL 522
Query: 491 -IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT 549
++ P+ IR + + C + P I W + R
Sbjct: 523 NVYGLPY-------IRQME----KKAIVAGETLIVTCPV--AGYPIDSIVWERDNRALPI 569
Query: 550 GSRVKTVYDFGFISLDMDYVY-ARDSGEYICRATNKWG-TAMTKAKVICKVLTVI----- 602
+ K + G +L ++ V D Y C A N+ G +A +V VL I
Sbjct: 570 NRKQKVFPN-G--TLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAF 626
Query: 603 -------------------------VEWFYNGKKLPHGHRY-RTFHDFGIVILDILYCYE 636
++W +G+ + + +L I
Sbjct: 627 EEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEA 686
Query: 637 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRT 696
++G + C A N G L
Sbjct: 687 SHAGNFTCHARNLAGHQQFTTPL------------------------------------- 709
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF 756
P + + ++ +G +A E + PK +V W +
Sbjct: 710 -----NVYVPPRWILEPTDKA-FAQGSDAKVECKADG--FPKPQVTWKKAVGDTPGEYKD 761
Query: 757 RTFCDFGFV---ILEISPVYPEDCGQYSCRAYNDYGEAVTSA 795
D V L + + + G Y C A N G +++
Sbjct: 762 LKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAV 803
Score = 285 bits (730), Expect = 5e-81
Identities = 132/941 (14%), Positives = 230/941 (24%), Gaps = 265/941 (28%)
Query: 37 LSINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKE 96
+++ + R ++ A G
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANP----------------------------- 31
Query: 97 VRKDEPELVFDSPVFISHL-NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDP 155
P+ PVF+ N ++ + +C+ + P
Sbjct: 32 -----PDADQKGPVFLKEPTNRIDFSNSTGAEIECKASGN-------------------P 67
Query: 156 ELKVEWFH-NGKPIFHKNRVKMVSDFG----FVVMDIAYVQSHDSGEYVCQWFVNNKPLP 210
++ W +G + ++ +S G Y Q + Y C N+
Sbjct: 68 MPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC--LARNQ--- 122
Query: 211 AGA--------------KFKTTHDFGYVALDIELMLK--------TLVPFTEWFVNNKPL 248
G+ ++ + +V ++K V W + +
Sbjct: 123 FGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEEN 182
Query: 249 PA-----GAKFKTTHDFGYVALDIVGAYAEDS-GIYTVKATNSKGSATTSG---TLKCLE 299
K+ L I ED Y + + T +
Sbjct: 183 YFPGAEYDGKYLVLPS---GELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVIT 239
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT 359
+ + SL + S G + + +
Sbjct: 240 EPISSAVPKVVSLAKFDMKTYSGSSTMALLC--PAQGYPVPVFRWYKFIEGTTRKQAVVL 297
Query: 360 VHAFGMV--VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKS 417
V L I +ED+G Y C N G + L V P +
Sbjct: 298 NDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLT-VT----APLSAKIDPPT 352
Query: 418 LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSH 477
+ G A F C T +P V W +GK I H V+ I V+
Sbjct: 353 QT-VDFGRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSES----------VLRIESVKKE 399
Query: 478 DSGEYVCRAWN-----------NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
D G Y C N P+ + + V C
Sbjct: 400 DKGMYQCFVRNDRESAEASAELKLGGRFDPPVIR--------QAFQEETMEPGPSVFLKC 451
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVK-----TVYDFGFISLDMDYVYARDSGEYICRA 581
+PT I W +G+ A R + TV L++ V+A D G Y C A
Sbjct: 452 V--AGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIA 509
Query: 582 TNKWGTAMTKAKVICKVLTVI---------------------------VEWFYNGKKLPH 614
+K G A AK+ L I + W + + LP
Sbjct: 510 KSKVGVAEHSAKLNVYGLPYIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPI 569
Query: 615 GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLP 674
+ + F + ++I ++ + Y C A N+ G
Sbjct: 570 NRKQKVFPNGTLIIENV--ERNSDQATYTCVAKNQEGYSARG------------------ 609
Query: 675 EGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPT 734
+ +++ P + G+ +
Sbjct: 610 -----------------------SLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGG 646
Query: 735 DDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV-ILEISPVYPEDCGQYSCRAYNDYGEAVT 793
D P L ++W +G+ + T +L I V G ++C A N G
Sbjct: 647 DLP-LNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQF 705
Query: 794 SASMKVQGKRSIILESQLPKGMEVF----ISFH--------------------------- 822
+ + V ILE P
Sbjct: 706 TTPLNVYVPPRWILE---PTDKAFAQGSDAKVECKADGFPKPQVTWKKAVGDTPGEYKDL 762
Query: 823 -------------EISPVYPEDCGQYSCRAYNDYGEAVTSA 850
+ + + G Y C A N G +++
Sbjct: 763 KKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAV 803
Score = 284 bits (728), Expect = 9e-81
Identities = 139/880 (15%), Positives = 246/880 (27%), Gaps = 209/880 (23%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
+++ + ++ A + GS T + ++ P+F + + + S
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQK-----GPVFLKEPTNRIDFSNST 55
Query: 325 IAHFEASLIPVGDQTMTVE-FLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDT----- 378
A E G+ + +G + +R + + G L + ED
Sbjct: 56 GAEIECKAS--GNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVH 111
Query: 379 -GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTP-V 436
VY C A N++G IS + V + + + + G+SA +C + V
Sbjct: 112 AQVYACLARNQFGSI-ISRD---VHVRAVVAQYYEADVNKEH-VIRGNSAVIKCLIPSFV 166
Query: 437 NDPELKVEWFHNGKPIF-----HKNRVKMVSDFGFVVMDIAYVQSHDS-GEYVCRAWNNF 490
D V W + + + + + ++ G + I V D Y CR +
Sbjct: 167 ADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS-GELH--IREVGPEDGYKSYQCRTKHRL 223
Query: 491 -----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRID 539
+ PI + D + + C + P
Sbjct: 224 TGETRLSATKGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQ--GYPVPVFR 281
Query: 540 WFFNGRPFATGSRVKTVYDFGFI--SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI-- 595
W+ V + +L + DSG+Y+C N G + +
Sbjct: 282 WYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVT 341
Query: 596 -----------------------CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVIL 629
C+ V W +GK + H +L
Sbjct: 342 APLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----------VL 391
Query: 630 DILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLED 689
I +E+ G+Y+C N S A LK L +
Sbjct: 392 RIESVKKEDKGMYQCFVRNDRESAEASAELK--------LGGRFD--------------- 428
Query: 690 AAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKP 749
PV + G + + +P ++ W +GK
Sbjct: 429 ----------------PPVIRQAFQEE-TMEPGPSVFLKCV--AGGNPTPEISWELDGKK 469
Query: 750 MKTGSRFR-----TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK-- 802
+ R++ T L I+ V+ D G Y C A + G A SA + V G
Sbjct: 470 IANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPY 529
Query: 803 ------------RSIILE-----------------SQLPKGMEVFISFH---EISPVY-P 829
++I+ LP + + + I V
Sbjct: 530 IRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERN 589
Query: 830 EDCGQYSCRAYNDYGEAVT-SASMKVQGKRSII----LESQLPKGMEGTID--------- 875
D Y+C A N G + S ++V II E G T+
Sbjct: 590 SDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLP 649
Query: 876 -KI------AELEGYGHEREDRTIDKIAELEGYGHEREDR------IEEDLGKA------ 916
I + R + + L E G
Sbjct: 650 LNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPL 709
Query: 917 -----PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF 971
P ++ PTD A+ + A EC+ P V W + +D
Sbjct: 710 NVYVPPRWILEPTDKAFAQGSDAKVECKA--DGFPKPQVTWKKAVGDTPGEYKDLKKSDN 767
Query: 972 GFV---ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
V L ++++ + G Y C+A N G ++ +
Sbjct: 768 IRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMIS 807
Score = 283 bits (726), Expect = 2e-80
Identities = 135/919 (14%), Positives = 237/919 (25%), Gaps = 254/919 (27%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
+ + +++ ++ A G ++ N D+ + P F + + A
Sbjct: 1 MNMPNERLKWLMLFAAVALIACGSQTLAANPPDADQ---KGPVFLKEPTNRIDFSNSTGA 57
Query: 428 HFECTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFG----FVVMDIAYVQSHDSGEY 482
EC + +P ++ W +G + ++ +S G Y Q + Y
Sbjct: 58 EIECKASG--NPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVY 115
Query: 483 VCRAWNNFIFIPPFPIFIFHQIRLP-SPSQDNLDVPEAGKVHFDCRLEPKS-DPTMRIDW 540
C A N F I + + + + V C + D + W
Sbjct: 116 ACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEVVSW 175
Query: 541 FFNGRP-----FATGSRVKTVYDFGFISLDMDYVYARDS-GEYICRATNKWGTAMTKAKV 594
+ + V G L + V D Y CR ++ +
Sbjct: 176 HTDEEENYFPGAEYDGKY-LVLPSG--ELHIREVGPEDGYKSYQCRTKHRLTGETRLSAT 232
Query: 595 I------------------------------------CKVL---TVIVEWFYNGKKLPHG 615
C + W+ +
Sbjct: 233 KGRLVITEPISSAVPKVVSLAKFDMKTYSGSSTMALLCPAQGYPVPVFRWYKFIEGTTRK 292
Query: 616 HRYRTFHDFGIV--ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQL 673
V L I E+SG Y C N G + + L
Sbjct: 293 QAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVL-------------- 338
Query: 674 PEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTP 733
+ + + G A F + T
Sbjct: 339 ---------TVTA-------------------PLSAKIDPPTQ-TVDFGRPAVFTCQYTG 369
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT 793
P V W +GK + +L I V ED G Y C ND A
Sbjct: 370 N--PIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEA 417
Query: 794 SASMKVQGKRS--IIL----ESQLPKGMEVFIS-------------FH------------ 822
SA +K+ G+ +I E + G VF+
Sbjct: 418 SAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQ 477
Query: 823 ---------------EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLP 867
I+ V+ D G Y C A + G A SA + V G I +
Sbjct: 478 VGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYI----RQM 533
Query: 868 KGMEGTIDKIAELE----GYGH-----EREDRTID-------------KIAELEGY---- 901
+ + + GY ER++R + I +E
Sbjct: 534 EKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVERNSDQA 593
Query: 902 ----------GHEREDRIEEDLGKAPEFLT-TPTDLTLAESTLAHFECRLTPTNDPSMTV 950
G+ +E + P + + C + + P + +
Sbjct: 594 TYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLP-LNI 652
Query: 951 EWFHNGKALSAGSRIKTINDFGFV-ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+W +G+A+S I T +L I V +G +TC A N G + L V
Sbjct: 653 DWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVY 712
Query: 1010 GRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEA 1069
PP + + D +
Sbjct: 713 V------------------------------------------PPRWILEPTD-KAFAQG 729
Query: 1070 GKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI---SLDMDYVYARDSGE 1126
+C+ + P ++ W + D + +L +D + + G
Sbjct: 730 SDAKVECKAD--GFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGY 787
Query: 1127 YICRATNKWGTAMTKAKVI 1145
Y+C A N G+ ++ +I
Sbjct: 788 YLCEAINGIGSGLSAVIMI 806
Score = 250 bits (639), Expect = 3e-69
Identities = 115/729 (15%), Positives = 202/729 (27%), Gaps = 164/729 (22%)
Query: 5 ADPNLKIEWFKNGVPLSL-----GSRIRSTFDFGLVTLSINSLRADDSA-IYTCKATNLL 58
AD + W + + L I + +D Y C+ + L
Sbjct: 167 ADFVEVVSWHTDEEENYFPGAEYDGKYLVLPS---GELHIREVGPEDGYKSYQCRTKHRL 223
Query: 59 GEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDV 118
K + V + V ++ +
Sbjct: 224 TGETRLSA-------------------------TKGRLVITEPISSAVPKVVSLAKFDMK 258
Query: 119 ECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS 178
+ + C + G P W+ + K V +
Sbjct: 259 TYSGSSTMALLCPAQ---------G----------YPVPVFRWYKFIEGTTRKQAVVLND 299
Query: 179 DFGFV--VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV 236
V + I DSG+Y+C VNN G + T L ++ T
Sbjct: 300 RVKQVSGTLIIKDAVVEDSGKYLCV--VNN---SVGGESVETVLTVTAPLSAKIDPPTQT 354
Query: 237 ------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIY 278
W + K + L I ED G+Y
Sbjct: 355 VDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMY 404
Query: 279 TVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQ 338
N + SA S L +L + P+ FQ + + G + G+
Sbjct: 405 QCFVRNDRESAEASAEL----KLGGRFDPPVIRQAFQEET-MEPGPSVFLKCV--AGGNP 457
Query: 339 TMTVEFLYNGKPIEASHRIR-----TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
T + + +GK I + R + TV+ + L I D G+Y C A +K G AE
Sbjct: 458 TPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAE 517
Query: 394 ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIF 453
S L P ++ + G++ C + P + W + + +
Sbjct: 518 HSAKLNVYG-----LPYIRQ-MEKKA-IVAGETLIVTCPVA--GYPIDSIVWERDNRALP 568
Query: 454 HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFH 502
+ K+ + ++ ++ ++ D Y C A N + + P
Sbjct: 569 INRKQKVFPNGTLIIENVE--RNSDQATYTCVAKNQEGYSARGSLEVQVMVLP------- 619
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 562
R+ + + + C + D + IDW +G+ + + T
Sbjct: 620 --RIIPFAFEEGPAQVGQYLTLHCSVP-GGDLPLNIDWTLDGQAISEDLGITTSRVGRRG 676
Query: 563 S-LDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI------------------- 602
S L ++ V A +G + C A N G + V
Sbjct: 677 SVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVEC 736
Query: 603 ---------VEWFYNGKKLPHGHRYRTFHDFGIV---ILDILYCYEENSGVYECRATNKY 650
V W P ++ D V L + + N G Y C A N
Sbjct: 737 KADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGI 796
Query: 651 GSDVTKASL 659
GS ++ +
Sbjct: 797 GSGLSAVIM 805
Score = 234 bits (599), Expect = 4e-64
Identities = 98/635 (15%), Positives = 178/635 (28%), Gaps = 146/635 (22%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDSAIYTCKATNLLGEAV 62
P W+K + + V TL I +DS Y C N +G
Sbjct: 274 GYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGES 333
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
L + P
Sbjct: 334 VETVLTVT------------------------------AP------LSAKIDPPTQTVDF 357
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 182
F C+ G P V W +GK I H V
Sbjct: 358 GRPAVFTCQYT---------GN----------PIKTVSWMKDGKAIGHSESV-------- 390
Query: 183 VVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH----------DFGYVALDIELML 232
+ I V+ D G Y C FV N + + + +
Sbjct: 391 --LRIESVKKEDKGMYQC--FVRN---DRESAEASAELKLGGRFDPPVIRQAFQEETMEP 443
Query: 233 KTLV-----------PFTEWFVNNKPLPAGAKFK-----TTHDFGYVALDIVGAYAEDSG 276
V P W ++ K + +++ T + L+I +A D G
Sbjct: 444 GPSVFLKCVAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGG 503
Query: 277 IYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIP 334
+Y A + G A S L + + + + GE +
Sbjct: 504 LYKCIAKSKVGVAEHSAKLNVYGLPY-----------IRQMEKKAIVAGETLIVTCPVA- 551
Query: 335 VGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQ-A 392
G ++ + + + + + + + V G L I + D YTC A N+ G A
Sbjct: 552 -GYPIDSIVWERDNRALPINRKQK-VFPNG--TLIIENVERNSDQATYTCVAKNQEGYSA 607
Query: 393 EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
S+ ++ P+ + G C++ D L ++W +G+ I
Sbjct: 608 RGSLEVQ-----VMVLPRIIPFAFEEGPAQVGQYLTLHCSVPG-GDLPLNIDWTLDGQAI 661
Query: 453 FHKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVCRAWNNF--------IFIPPFPIFIFHQ 503
+ V+ I V++ +G + C A N + + P +I
Sbjct: 662 SEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWI--- 718
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI- 562
P+ + + +C+ + P ++ W + D +
Sbjct: 719 -LEPT----DKAFAQGSDAKVECKAD--GFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVE 771
Query: 563 --SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+L +D + + G Y+C A N G+ ++ +I
Sbjct: 772 EGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMI 806
Score = 219 bits (559), Expect = 4e-59
Identities = 88/599 (14%), Positives = 154/599 (25%), Gaps = 160/599 (26%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFP--FINISTAFLI 1319
P + + TV P F + + + I S + L
Sbjct: 341 TAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVS--------WMKDGKAIGHSESVLR 392
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
I+ V ED+G Y C ND A A +
Sbjct: 393 -----------------------IESVKKEDKGMYQCFVRNDRESAEASA--------EL 421
Query: 1380 QLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVE 1439
+L + PP + + +
Sbjct: 422 KLGGRFD-------------------------------------PPVIRQAFQEE-TMEP 443
Query: 1440 MQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-----VYPED 1494
S +C G+P ++ W L+GK + + +R+ + V+ D
Sbjct: 444 GPSVFLKCV--AGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHAND 501
Query: 1495 SGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLV 1554
G Y C A + G+ E A L G P
Sbjct: 502 GGLYKCIAKSKVGVAEHSAKLNVYGLP--------------------------------- 528
Query: 1555 EDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITA- 1613
++ Q E + + GE V GYP ++W + + +K+
Sbjct: 529 ----------YIRQMEKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVFPN 578
Query: 1614 -----TETTEMEHKGK----IQERVVDASEKPA------KPPVFTKKIQPCRAFEQDQAR 1658
+ + + ++ P + + A
Sbjct: 579 GTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLT 638
Query: 1659 FEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTK-SILIMRQVFMEDSGVFAVIAEN 1716
G LP I W + I+ + S+L + V +G F A N
Sbjct: 639 LHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARN 698
Query: 1717 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 1776
G + + L V VPP ++ + G A+ + K V W
Sbjct: 699 LAGHQQFTTPLNVY----------VPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTW 748
Query: 1777 LKNGKKIIPDIRYKTLEEDNLF---TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
K + + ++ TL + + G Y C A+N G ++
Sbjct: 749 KKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIMIS 807
Score = 162 bits (412), Expect = 1e-40
Identities = 64/439 (14%), Positives = 120/439 (27%), Gaps = 105/439 (23%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIR-----STFDFGLVTLSINSLRADDSAIYTCKATN 56
+P +I W +G ++ R + + + L+I S+ A+D +Y C A +
Sbjct: 452 VAGGNPTPEISWELDGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKS 511
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLN 116
+G A + L + P +I +
Sbjct: 512 KVGVAEHSAKLNV---------------------YGLP----------------YIRQME 534
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
E + C V P + W + + + + K+
Sbjct: 535 KKAIVAGETLIVTCPVA-------------------GYPIDSIVWERDNRALPINRKQKV 575
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVCQWFVNN--------------KPLPAGAKFKTTHDFG 222
+ ++ ++ ++ D Y C N LP F G
Sbjct: 576 FPNGTLIIENVE--RNSDQATYTCV--AKNQEGYSARGSLEVQVMVLPRIIPFAFEE--G 629
Query: 223 YVALDIELMLKTLV-----PFT-EWFVNNKPLPAGAKFKTTHDFGYVA-LDIVGAYAEDS 275
+ L L V P +W ++ + + T+ + L I A +
Sbjct: 630 PAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHA 689
Query: 276 GIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPV 335
G +T A N G + L P + L+ + ++G A E
Sbjct: 690 GNFTCHARNLAGHQQFTTPLNVYVP-------PRWILEPTDKA-FAQGSDAKVECKAD-- 739
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMV---VLEILGTKIEDTGVYTCRATNKWGQA 392
G V + ++ V L + + + G Y C A N G
Sbjct: 740 GFPKPQVTWKKAVGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIGSG 799
Query: 393 EISVNLECVDKSKGQPPKF 411
+V + V
Sbjct: 800 LSAVIMISVQA----HHHH 814
Score = 128 bits (322), Expect = 6e-30
Identities = 66/509 (12%), Positives = 129/509 (25%), Gaps = 146/509 (28%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
+PP + T++ V + +P + + I+
Sbjct: 427 FDPPVIRQAFQEETMEPGPSVFLKCVAGG--NPTPEIS------WELDGKKIANND---- 474
Query: 1322 FCLHAVIFSHPIFDLGFVS-LDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI- 1379
+ + + VS L+I V+ D G Y C A + G A A ++ +P I
Sbjct: 475 ---RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIR 531
Query: 1380 QLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVE 1439
Q++ + +V
Sbjct: 532 QMEKKA---------------------------------------------------IVA 540
Query: 1440 MQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYL 1499
++ C +A G P + W + + LP + + + N D Y
Sbjct: 541 GETLIVTCPVA--GYPIDSIVWERDNRALPINRKQKVFPNGTLIIENVER--NSDQATYT 596
Query: 1500 CRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKP 1559
C A N G ++ ++ P
Sbjct: 597 CVAKNQEGYSARGSL-------------------------------------EVQVMVLP 619
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP-RVMWLINGHTIVNEIVRKITATET-- 1616
+ P E Q G+ V G P + W ++G I ++ +
Sbjct: 620 RIIPF---AFEEGPAQVGQYLTLHCSVPGGDLPLNIDWTLDGQAISEDLGITTSRVGRRG 676
Query: 1617 -------TEMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEV 1661
E H G + + PP + + + A+ E
Sbjct: 677 SVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVEC 736
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK-----SILIMRQVFMEDSGVFAVIAEN 1716
+ DG P P + W + +++ S L + + + G + A N
Sbjct: 737 KADGFPKPQVTWKKAVGDT--PGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAIN 794
Query: 1717 RGGKAKCSANLVVEEKRQGGRGGVVPPSF 1745
G + ++ +
Sbjct: 795 GIGSGLSAVIMISVQ---------AHHHH 814
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain,
vegfr-2, growth factor receptor, VEGF LI
hormone-signaling protein complex, angiogenesis; 3.20A
{Homo sapiens} PDB: 3v6b_R
Length = 772
Score = 278 bits (712), Expect = 4e-79
Identities = 116/927 (12%), Positives = 214/927 (23%), Gaps = 236/927 (25%)
Query: 274 DSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLI 333
++ T + S +L P S+Q L+ +
Sbjct: 8 AVALWLCVETRAASVGLPSVSLD----------LPRLSIQKDILT-IKANTTLQITCRGQ 56
Query: 334 PVGDQTMTVEFLYNGKPIEASHRIR---TVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 390
+++L+ + R+ L I DTG Y C
Sbjct: 57 R------DLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDL 110
Query: 391 QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK 450
+ I V ++ + + + C + N + +
Sbjct: 111 ASVIYVYVQDYRSPFIASVSDQHGVVYITE-NKNKTVVIPCLGSISNLNVSLCARYPEKR 169
Query: 451 PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIF 499
+ NR+ S GF I +G C A N +
Sbjct: 170 FVPDGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDV 226
Query: 500 IFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK----- 554
+ +++ K+ +C + + + +W + V
Sbjct: 227 VLS-------PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT 279
Query: 555 ---TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI---------------- 595
+ +L +D V D G Y C A++ T V
Sbjct: 280 QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESL 339
Query: 596 ------------CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSG 640
K L ++W+ NG L H + H +L I+ E ++G
Sbjct: 340 VEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGH-----VLTIMEVSERDTG 394
Query: 641 VYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETAD 700
Y TN + +++
Sbjct: 395 NYTVILTNPISKE----------------------------------------KQSHVVS 414
Query: 701 IEHRQAPVFTVP--LSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT 758
+ P +S +D + G + P + W+W + +
Sbjct: 415 LVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPP-HHIHWYWQLEEECANEPSQA 473
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVF 818
E + G + ++GK +
Sbjct: 474 VSVTNPYPCEEWRSVEDFQGGNKIEVNKNQ-------FALIEGKNKTVS----------- 515
Query: 819 ISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIA 878
+ Y C A N G S V I L+ +
Sbjct: 516 ----TLVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDM------------ 559
Query: 879 ELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFEC 938
E ++ + L
Sbjct: 560 ------QPTEQESVSLWCTADRS-------------TFENLTWYKLG----PQPLPIHVG 596
Query: 939 RLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHG 998
L ++ W N S + +I+E+ + L+D G Y C A ++
Sbjct: 597 ELPTPVCKNLDTLWKLNATMFSNSTN-------DILIMELKNASLQDQGDYVCLAQDRKT 649
Query: 999 EATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTS 1058
+ + V +V P T
Sbjct: 650 KKRHCVVRQLT------VLERV--------------------------------APTITG 671
Query: 1059 QLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 1118
L+ N + C +P +I WF + S + +L +
Sbjct: 672 NLE-NQTTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRR 726
Query: 1119 VYARDSGEYICRATNKWGTAMTKAKVI 1145
V D G Y C+A + G A +A I
Sbjct: 727 VRKEDEGLYTCQACSVLGCAKVEAFFI 753
Score = 262 bits (671), Expect = 9e-74
Identities = 123/885 (13%), Positives = 221/885 (24%), Gaps = 249/885 (28%)
Query: 39 INSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVR 98
+ S A++ C T + + +L
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSL------------------------------- 29
Query: 99 KDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELK 158
D P + + K N + CR + +L
Sbjct: 30 --------DLPRLSIQKDILTIKANTTLQITCRGQR---------------------DLD 60
Query: 159 VEWFHNGKPIFHKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVCQ-------------WFV 204
W +N + V SD F + I V +D+G Y C
Sbjct: 61 WLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQD 120
Query: 205 NNKPLPAGAKFKTTHDFGYVALDIELMLKTLVP-------FTEWFVNNKPLPAGAKFKTT 257
P A + + + +++ L + + +P G +
Sbjct: 121 YRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWD 180
Query: 258 HDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHL 317
G I +G+ +A + S + + + V + L H
Sbjct: 181 SKKG---FTIPSYMISYAGMVFCEAKINDESYQSIMYIV----VVVGYRIYDVVLSPSHG 233
Query: 318 SNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR--------TVHAFGMVVLE 369
LS GE + + + + Y + + + + L
Sbjct: 234 IELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLT 293
Query: 370 ILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHF 429
I G D G+YTC A++ + S + +K F S ++SL G+
Sbjct: 294 IDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK---PFVAFGSGMESLVEATVGERVRI 350
Query: 430 ECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
P +++W+ NG P+ + +K V+ I V D+G Y N
Sbjct: 351 PAKYL--GYPPPEIKWYKNGIPLESNHTIKAGH-----VLTIMEVSERDTGNYTVILTNP 403
Query: 490 F------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMR 537
+++PP QI S C + P
Sbjct: 404 ISKEKQSHVVSLVVYVPP-------QIGEKSLISPVDSYQYGTTQTLTCTVY-AIPPPHH 455
Query: 538 IDWFFNGRPFA---------------------------------TGSRVKTVYDFGFISL 564
I W++ ++ +
Sbjct: 456 IHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVS 515
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI---------------------- 602
+ A S Y C A NK G I
Sbjct: 516 TLVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDMQPTEQESVSLWCTADR 575
Query: 603 -----VEWFYNGKKLPHGHRYR--------------------TFHDFGIVILDILYCYEE 637
+ W+ G + H + I+I+++ +
Sbjct: 576 STFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQ 635
Query: 638 NSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTE 697
+ G Y C A ++ L + ++
Sbjct: 636 DQGDYVCLAQDRKTKKRHCVVR------QLTVLERVA----------------------- 666
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR 757
P T L N GE+ + +P ++ WF + + + S
Sbjct: 667 ---------PTITGNLENQT-TSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIV 714
Query: 758 TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
G L I V ED G Y+C+A + G A A ++G
Sbjct: 715 L--KDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGA 757
Score = 238 bits (607), Expect = 1e-65
Identities = 111/940 (11%), Positives = 222/940 (23%), Gaps = 259/940 (27%)
Query: 978 INDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEA 1037
+ L L+ C T S L
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSLD------------------------------ 30
Query: 1038 LYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF 1097
P + Q L + + CR + W N
Sbjct: 31 ---------------LPRLSIQKDI-LTIKANTTLQITCR----GQRDLDWLWPNNQSGS 70
Query: 1098 ATGSRVKTVYDFGFIS-LDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTES 1156
V D F L + V D+G Y C ++ V
Sbjct: 71 EQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYV------------ 118
Query: 1157 QLPDSMSAEKLKELEKNYTPEEIEEDEIPEE----PPRLNQSRYKKQNQSAWYDSELSEY 1212
Q S + + E + + LN S + + +
Sbjct: 119 QDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFV------- 171
Query: 1213 QKERANESTELEKHDIVTESQLPDS----MSAEKLKELEKNYTPEEIEEDEIPEEPPRFI 1268
+ S + +K + + + A+ E + I +
Sbjct: 172 -PDGNRISWDSKKGFTIPSYMISYAGMVFCEAKI--NDESYQSIMYIVVVVGYRIYDVVL 228
Query: 1269 TEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVI 1328
+ + + E + ++ + + +P L+
Sbjct: 229 SPSHGIELSVGEKLVLNCTARTELNVGIDFN------WEYPSSKHQHKKLVNRD---LKT 279
Query: 1329 FSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKG 1388
S +L ID V DQG Y C A + +
Sbjct: 280 QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFV----------------- 322
Query: 1389 MLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQ 1448
++E F + +++ + + + +
Sbjct: 323 --------------------------RVHEKPF---VAFGSGMESLVEATVGERVRIPAK 353
Query: 1449 LAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGM 1508
G P +++W+ NG PL + + + V D+G Y TN
Sbjct: 354 YL--GYPPPEIKWYKNGIPLESNHTIKAGH-----VLTIMEVSERDTGNYTVILTNPISK 406
Query: 1509 DETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQ 1568
++ ++ LV P+ +
Sbjct: 407 EKQSHVV------------------------------------SLVVYVPPQIGEKSLIS 430
Query: 1569 PEAQKVQEGEPARFCTRVTGYPRPR-VMWLINGHTIV----------------------- 1604
P Q G V P P + W
Sbjct: 431 PV-DSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVE 489
Query: 1605 ---NEIVRKITATETTEMEHKGKIQERVVDASEKPA-----------------------K 1638
++ + +E K K +V + + +
Sbjct: 490 DFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVTR 549
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK---- 1694
P T + + EQ+ D + W++ ++ T K
Sbjct: 550 GPEITLQPDM-QPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDT 608
Query: 1695 ----------------SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRG 1738
I+ ++ ++D G + +A++R K + + +
Sbjct: 609 LWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLER---- 664
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF 1798
V P+ + + ++G+ S P + W K+ + ++ D + +
Sbjct: 665 --VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNR-- 720
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
L I ED G Y C A + G A+ EA +++ +
Sbjct: 721 NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 760
Score = 233 bits (596), Expect = 4e-64
Identities = 97/744 (13%), Positives = 186/744 (25%), Gaps = 176/744 (23%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVA-LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W N + D + L I D+G Y + ++ ++
Sbjct: 63 WPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYR 122
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY-NGKPIEASHRIR 358
F+ + + + + + L + + +++ Y + + +RI
Sbjct: 123 SPFIASVSDQHGVVYITEN---KNKTVVIPC-LGSISNLNVSLCARYPEKRFVPDGNRIS 178
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSL 418
G I I G+ C A + + + V S +
Sbjct: 179 WDSKKG---FTIPSYMISYAGMVFCEAKINDESYQSIMYIV-VVVGYRIYDVVLSPSHGI 234
Query: 419 EGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK--------MVSDFGFVVMD 470
E L G+ CT + + W + HK V +
Sbjct: 235 E-LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLT 293
Query: 471 IAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
I V D G Y C A + + PF + S + ++
Sbjct: 294 IDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPF-------VAFGSGMESLVEATVGE 346
Query: 521 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 580
+V + P I W+ NG P + +K + L + V RD+G Y
Sbjct: 347 RVRIPAKYL--GYPPPEIKWYKNGIPLESNHTIKAGH-----VLTIMEVSERDTGNYTVI 399
Query: 581 ATNKWGTAMTKAKVI------------------------------CKV----LTVIVEWF 606
TN V C V + W+
Sbjct: 400 LTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWY 459
Query: 607 YNGKKL---------------------------------PHGHRYRTFHDFGIVILDILY 633
+ ++ + +++ + ++
Sbjct: 460 WQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVI 519
Query: 634 CYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHL 693
S +Y+C A NK G S + L+ + + E
Sbjct: 520 QAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQPDM-QPTEQ-------------- 564
Query: 694 RRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG 753
E+ + N+ + G ++ W K
Sbjct: 565 ---ESVSLW---CTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLW-----KLN 613
Query: 754 SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK----------- 802
+ + +I+E+ +D G Y C A + + ++
Sbjct: 614 ATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNL 673
Query: 803 --------RSIILE-----------------SQLPKGMEVFISFH----EISPVYPEDCG 833
SI + L + + + I V ED G
Sbjct: 674 ENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEG 733
Query: 834 QYSCRAYNDYGEAVTSASMKVQGK 857
Y+C+A + G A A ++G
Sbjct: 734 LYTCQACSVLGCAKVEAFFIIEGA 757
Score = 222 bits (566), Expect = 3e-60
Identities = 113/922 (12%), Positives = 219/922 (23%), Gaps = 207/922 (22%)
Query: 640 GVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETA 699
++ C T + SL
Sbjct: 10 ALWLCVETRAASVGLPSVSL---------------------------------------- 29
Query: 700 DIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-- 757
P ++ + ++ R ++W W + R
Sbjct: 30 -----DLPRLSIQKDILT-IKANTTLQITCRGQRD------LDWLWPNNQSGSEQRVEVT 77
Query: 758 -TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGME 816
L I V D G Y C +V ++ I S
Sbjct: 78 ECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHG--V 135
Query: 817 VFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDK 876
V+I+ ++ V C + +++ V + +P G + D
Sbjct: 136 VYITENKNKTV------VIPCL--------GSISNLNVSLCARYPEKRFVPDGNRISWDS 181
Query: 877 IAELEGYGHEREDRTIDK-IAELEGYGHEREDRI--EEDLGKAPEFLTTPTDLTLAESTL 933
+ + A++ ++ I L+ + L+
Sbjct: 182 KKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEK 241
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK--------TINDFGFVILEINDVYLRD 985
C + + W + + + L I+ V D
Sbjct: 242 LVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD 301
Query: 986 SGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELI 1045
GLYTC A++ S + V
Sbjct: 302 QGLYTCAASSGLMTKKNSTFVRV------------------------------------- 324
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
EKP S ++ ++ +V + P I W+ NG P + +K
Sbjct: 325 --HEKPFVAFG-SGMESLVEATVGERVRIPAKYL--GYPPPEIKWYKNGIPLESNHTIKA 379
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT--KAKVICKAKHDIVTESQLPDSMS 1163
+ L + V RD+G Y TN ++ I +S + S
Sbjct: 380 GH-----VLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDS 434
Query: 1164 AEKLKEL------EKNYTPEEI------EEDEIPEEPPRLNQSRYKKQNQSAWYDSELSE 1211
+ P I EE+ E ++ + + +
Sbjct: 435 YQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGG 494
Query: 1212 YQKERANESTELEKHDIVTESQLPDSMSAEKLKELEKNYTPE---EIEEDE-----IPEE 1263
+ E L + T S L + Y E ++ E
Sbjct: 495 NKIEVNKNQFALIEGKNKTVSTLVIQA-----ANVSALYKCEAVNKVGRGERVISFHVTR 549
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVE-CSLSTAFFFPFINISTAFLIFNF 1322
P + + + E E V + L + +
Sbjct: 550 GPEITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDT 608
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
+ +++ +DQG+YVC A + + + +
Sbjct: 609 LWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVR------QLTVL 662
Query: 1383 NQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQS 1442
++ P ++ Q +S
Sbjct: 663 --------------------------------------ERVAPTITGNLENQ-TTSIGES 683
Query: 1443 TKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRA 1502
+ C + G+P ++ WF + + L + + G + V ED G Y C+A
Sbjct: 684 IEVSCTAS--GNPPPQIMWFKDNETLVEDSGI--VLKDGNRNLTIRRVRKEDEGLYTCQA 739
Query: 1503 TNLYGMDETRAILKTTGKPGII 1524
++ G + A G
Sbjct: 740 CSVLGCAKVEAFFIIEGAQEKT 761
Score = 198 bits (504), Expect = 2e-52
Identities = 96/675 (14%), Positives = 170/675 (25%), Gaps = 173/675 (25%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIE 70
+ + G+RI G I S + + C+A S + +
Sbjct: 162 CARYPEKRFVPDGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYIVVV 218
Query: 71 DRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDC 130
+ V +S + +E E + +C
Sbjct: 219 V----------GYRIY----------------------DVVLSPSHGIELSVGEKLVLNC 246
Query: 131 RVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVK--------MVSDFGF 182
+ + W + HK V
Sbjct: 247 TARTE---------------L--NVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 289
Query: 183 VVMDIAYVQSHDSGEYVCQ-----------WFVNNKPLPAGAKFKTTHDFGYVALDIELM 231
+ I V D G Y C FV P A + +
Sbjct: 290 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVR 349
Query: 232 LKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSK 286
+ P +W+ N PL + K H L I+ D+G YTV TN
Sbjct: 350 IPAKYLGYPPPEIKWYKNGIPLESNHTIKAGH-----VLTIMEVSERDTGNYTVILTNPI 404
Query: 287 GSATTSGTLKCLERLFVNHNYPLFSLQF--QHLSNLSEGEIAHFE--------------- 329
S + L V P + + + G
Sbjct: 405 SKEKQSHVV----SLVVYVP-PQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWY 459
Query: 330 ----------------ASLIPVGDQTMTVEFLYNGKPIEAS-HRIRTVHAFGMVVLEILG 372
+ ++ +VE G IE + ++ + V ++
Sbjct: 460 WQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVI 519
Query: 373 TKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECT 432
+ +Y C A NK G+ E ++ P+ T ++ + +S CT
Sbjct: 520 QAANVSALYKCEAVNKVGRGERVISFHVTR-----GPEIT--LQPDMQPTEQESVSLWCT 572
Query: 433 LTPVNDPELKVEWFHNGKPIFHKNRVKMV--------------------SDFGFVVMDIA 472
+ W+ G + ++ S ++M++
Sbjct: 573 AD--RSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELK 630
Query: 473 YVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
D G+YVC A + + P + +N
Sbjct: 631 NASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTIT--------GNLENQTTSIGE 682
Query: 521 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 580
+ C +P +I WF + S + +L + V D G Y C+
Sbjct: 683 SIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQ 738
Query: 581 ATNKWGTAMTKAKVI 595
A + G A +A I
Sbjct: 739 ACSVLGCAKVEAFFI 753
Score = 187 bits (475), Expect = 9e-49
Identities = 79/692 (11%), Positives = 161/692 (23%), Gaps = 206/692 (29%)
Query: 1259 EIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFL 1318
+ + PR + + +T++ ++ R + +D + +P +
Sbjct: 26 SVSLDLPRLSIQKDILTIKANTTLQITCRGQRDLD------------WLWPNNQSGSE-- 71
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
V + L +L I V D G Y C + + + P
Sbjct: 72 ------QRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPF 125
Query: 1379 IQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV 1438
I + ++T+
Sbjct: 126 IA-------------------------------------SVSDQHGVVYITE-------N 141
Query: 1439 EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEY 1498
+ ++ C + + + +P NR + G+ + +G
Sbjct: 142 KNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPS---YMISYAGMV 198
Query: 1499 LCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEK 1558
C A ++ +
Sbjct: 199 FCEAKINDESYQSIMYIVVV--------------------------------------VG 220
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTE 1618
+ V +S ++ GE + + + ++ + + T+
Sbjct: 221 YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 280
Query: 1619 MEHKGKIQERV------------------------------VDASEKPAKPPVFTKKIQP 1648
+ K V EKP +
Sbjct: 281 SGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKP-FVAFGSGMESL 339
Query: 1649 CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSG 1708
A ++ R ++ G P P IKW++ P+ S+ HT +L + +V D+G
Sbjct: 340 VEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESN-----HTIKAGHVLTIMEVSERDTG 394
Query: 1709 VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA---VINVGQLARFDAK 1765
+ VI N K K S + + VPP + G
Sbjct: 395 NYTVILTNPISKEKQSHVVSLVVY--------VPPQIGEKSLISPVDSYQYGTTQTLTCT 446
Query: 1766 ISAT-KPLDVYWLKNGKKIIPDI---------------------------------RYKT 1791
+ A P ++W ++ + ++
Sbjct: 447 VYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFAL 506
Query: 1792 LEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQ 1851
+E N ++ S Y+C A+N G V
Sbjct: 507 IEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVT------------------ 548
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
D E +V+L C
Sbjct: 549 --RGPEITLQPDMQPTEQESVSLWCTADRSTF 578
Score = 178 bits (453), Expect = 5e-46
Identities = 73/572 (12%), Positives = 150/572 (26%), Gaps = 158/572 (27%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIR--------STFDFGLVTLSINSLRADDSAIYTC 52
+ + W + S L TL+I+ + D +YTC
Sbjct: 248 ARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTC 307
Query: 53 KATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFI 112
A++ L ++ +++ ++ P +
Sbjct: 308 AASSGLMTKKNSTFVRVHEK-------------PFV--------------------AFGS 334
Query: 113 SHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN 172
+ VE E V + P +++W+ NG P+ +
Sbjct: 335 GMESLVEATVGERVRIPAKYL-------------------GYPPPEIKWYKNGIPLESNH 375
Query: 173 RVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK---------------PLPAGAKFKT 217
+K V+ I V D+G Y + N P +
Sbjct: 376 TIKAGH-----VLTIMEVSERDTGNYTVI--LTNPISKEKQSHVVSLVVYVPPQIGEKSL 428
Query: 218 THDFGYVALDIELMLKTLV-----PFT-EWFVNNKPLPAGAK------------------ 253
L V P W+ + A
Sbjct: 429 ISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSV 488
Query: 254 ---------------FKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
F +V A S +Y +A N G +
Sbjct: 489 EDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVT 548
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI------- 351
P +LQ +E E + + + G
Sbjct: 549 RG-------PEITLQPD--MQPTEQESVSLWCT--ADRSTFENLTWYKLGPQPLPIHVGE 597
Query: 352 -------------EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
+ + + + ++++E+ ++D G Y C A ++ + V
Sbjct: 598 LPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVR 657
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 458
+ + + P T ++++ G+S CT + +P ++ WF + + + + +
Sbjct: 658 Q-LTVLERVAPTITGNLENQT-TSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGI 713
Query: 459 KMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ + I V+ D G Y C+A +
Sbjct: 714 VLKDGNRNLT--IRRVRKEDEGLYTCQACSVL 743
Score = 178 bits (452), Expect = 6e-46
Identities = 73/700 (10%), Positives = 143/700 (20%), Gaps = 208/700 (29%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
+ +T + + V L V +
Sbjct: 125 FIASVSDQHGVVYITENKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPD-------- 173
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
+ I I G C A + + I I
Sbjct: 174 ---------GNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRI- 223
Query: 1381 LQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM 1440
++ +L
Sbjct: 224 -------------------------------------------YDVVLSPSHGI-ELSVG 239
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN--------RFNPIYDFGYVAMNFGWVYP 1492
+ C + + W HK + + V
Sbjct: 240 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTR 299
Query: 1493 EDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQ 1552
D G Y C A++ + ++ KP +
Sbjct: 300 SDQGLYTCAASSGLMTKKNSTFVRVHEKPFV----------------------------- 330
Query: 1553 LVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
+ GE R + GYP P + W NG + + K
Sbjct: 331 ----------AFGSGMESLVEATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAG 380
Query: 1613 AT---ETTEMEHKGKIQ----------ERVVDASEKPAKPPVFTKKI---QPCRAFEQDQ 1656
G ++ S PP +K
Sbjct: 381 HVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYGTT 440
Query: 1657 ARFEVEFDGDPLP-TIKWFREDFPITSSP------------------------------- 1684
P P I W+ + ++
Sbjct: 441 QTLTCTVYAIPPPHHIHWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVN 500
Query: 1685 --DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVP 1742
F + K++ + S ++ A N+ G+ + + V
Sbjct: 501 KNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERVISFHVT----------RG 550
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLE--------- 1793
P + + ++ W K G + +P +
Sbjct: 551 PEITLQPDMQPT-EQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTL 609
Query: 1794 -----------EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQA 1842
+++ + + A ++D G Y C+A + + R +
Sbjct: 610 WKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLT--------- 660
Query: 1843 PAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
V + APT+ L++Q G ++ + C +G P
Sbjct: 661 ------VLERVAPTITGNLENQTTSIGESIEVSCTASGNP 694
Score = 177 bits (449), Expect = 2e-45
Identities = 107/865 (12%), Positives = 209/865 (24%), Gaps = 170/865 (19%)
Query: 573 DSGEYICRATNKWGTAMTKAKVI----------------------CKVL-TVIVEWFYNG 609
++C T + + C+ + W N
Sbjct: 8 AVALWLCVETRAASVGLPSVSLDLPRLSIQKDILTIKANTTLQITCRGQRDLDWLWPNNQ 67
Query: 610 KKLPHGHRYRTFHDFGIV-ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLI 668
D L I ++G Y+C + V
Sbjct: 68 SGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYV----------- 116
Query: 669 LESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFE 728
++D +D + V+ + +
Sbjct: 117 -----------------YVQDYRSPFIASVSD---QHGVVYIT-------ENKNKTVVIP 149
Query: 729 ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDY 788
+ ++ + + + G+R GF I G C A +
Sbjct: 150 CLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTI---PSYMISYAGMVFCEAKIND 206
Query: 789 GEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVT 848
+ + V + +V +S + + +C A + +
Sbjct: 207 ESYQSIMYIVVVVG---------YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGID 257
Query: 849 ----SASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEG--Y- 901
S K Q K+ + + + G E ++ L TID + + Y
Sbjct: 258 FNWEYPSSKHQHKKLVNRDLKTQSGSE-MKKFLSTL----------TIDGVTRSDQGLYT 306
Query: 902 --------GHEREDRIE-EDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW 952
+ + + + + + P ++W
Sbjct: 307 CAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAK--YLGYPPPEIKW 364
Query: 953 FHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSC--KLTVKG 1010
+ NG L + IK + +L I +V RD+G YT TN + S L V
Sbjct: 365 YKNGIPLESNHTIKAGH-----VLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYV 419
Query: 1011 RQGIDVEPQVSAIFANATKNIQKLE-EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEA 1069
I + +S + + Q L P P Q +
Sbjct: 420 PPQIGEKSLISPVDSYQYGTTQTLTCTV----------YAIPPPHHIHWYWQLEEECANE 469
Query: 1070 GKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVKTVYDFGFISLDMDYVYARDSGEYI 1128
+ ++ F G ++ + + A S Y
Sbjct: 470 PSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYK 529
Query: 1129 CRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELE---KNYTPEEIE--EDE 1183
C A NK G +I + + ++ L T E + +
Sbjct: 530 CEAVNKVGRGERVISFHVTRGPEITLQPD--MQPTEQESVSLWCTADRSTFENLTWYKLG 587
Query: 1184 IPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEKHDIVTESQLPDS------ 1237
P + + + N+ +E + + L D
Sbjct: 588 PQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIME----LKNASLQDQGDYVCL 643
Query: 1238 ---MSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDP 1294
+K + + T + P +E+ T E + +P
Sbjct: 644 AQDRKTKKRHCVVRQLT-------VLERVAPTITGNLENQTTSIGESIEVSCTASG--NP 694
Query: 1295 RLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEY 1354
++ F + S + G +L I V ED+G Y
Sbjct: 695 PPQIMW------FKDNETLVED-------------SGIVLKDGNRNLTIRRVRKEDEGLY 735
Query: 1355 VCRAYNDHGEAFTKATISCKKIPTI 1379
C+A + G A +A +
Sbjct: 736 TCQACSVLGCAKVEAFFIIEGAQEK 760
Score = 145 bits (366), Expect = 3e-35
Identities = 98/875 (11%), Positives = 194/875 (22%), Gaps = 235/875 (26%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMK-----VQGKRSIILESQ---LP-KGMEGTI 874
+ + C + S S+ +Q I + + +G + +
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSLDLPRLSIQKDILTIKANTTLQITCRG-QRDL 59
Query: 875 DKIAELEGYGHEREDRTIDKIAELEGYGHEREDRI----EEDLGK--------------- 915
+ ++ ++ E + I D G
Sbjct: 60 ----DWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIY 115
Query: 916 ------------APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS 963
+ +T ++ C + +N + + + G+
Sbjct: 116 VYVQDYRSPFIASVSDQHGVVYITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGN 175
Query: 964 RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAI 1023
RI + GF I + +G+ C+A + + V
Sbjct: 176 RISWDSKKGFTI---PSYMISYAGMVFCEAKINDESYQSIMYIVVV-------------- 218
Query: 1024 FANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSD 1083
+++ K+ +C + +
Sbjct: 219 -------------------------VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELN 253
Query: 1084 PTMRIDWFFNGRPFATGSRVK--------TVYDFGFISLDMDYVYARDSGEYICRATNKW 1135
+ +W + V + +L +D V D G Y
Sbjct: 254 VGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYT------- 306
Query: 1136 GTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSR 1195
C A + M+ + + + E +
Sbjct: 307 ----------CAASSGL---------MTKKNSTFVR-------VHEKPFVAFGSGMESLV 340
Query: 1196 YKKQNQSA---------------WY--DSELSEYQKERANES---TELEKHD------IV 1229
+ WY L +A E+ + D I+
Sbjct: 341 EATVGERVRIPAKYLGYPPPEIKWYKNGIPLESNHTIKAGHVLTIMEVSERDTGNYTVIL 400
Query: 1230 TESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQ---EAEP----V 1282
T + S L P+ E+ I P + T+ A P +
Sbjct: 401 TNPISKEKQSHVV--SLVVYVPPQIGEKSLIS--PVDSYQYGTTQTLTCTVYAIPPPHHI 456
Query: 1283 RFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLD 1342
+ ++E S++ + F N I
Sbjct: 457 HWYWQLEEECANEPSQAVSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVST 516
Query: 1343 IDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAI 1402
+ Y C A N G + + P I LQ P + + +
Sbjct: 517 LVIQAANVSALYKCEAVNKVGRGERVISFHVTRGPEITLQ---PDMQPTEQESVSLWCTA 573
Query: 1403 KKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWF 1462
+ +T K Q + + +L N+ W
Sbjct: 574 DRS------------------TFENLTWYKLGPQPLPIHVG----ELPTPVCKNLDTLWK 611
Query: 1463 LNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
LN + I M +D G+Y+C A + + + T
Sbjct: 612 LNATMFSNSTNDILI-------MELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLT---- 660
Query: 1523 IIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF 1582
+ AP E Q GE
Sbjct: 661 ----------------------------------VLERVAPTITGNLENQTTSIGESIEV 686
Query: 1583 CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
+G P P++MW + T+V + +
Sbjct: 687 SCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRN 721
Score = 134 bits (337), Expect = 8e-32
Identities = 43/423 (10%), Positives = 82/423 (19%), Gaps = 102/423 (24%)
Query: 1492 PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPE 1551
+LC T + L
Sbjct: 6 LLAVALWLCVETRAASVGLPSVSL------------------------------------ 29
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKI 1611
+ P Q + ++ + G +W N +
Sbjct: 30 ---------DLPRLSIQKDILTIKANTTLQI--TCRGQRDLDWLWPNNQSGSEQRVEVTE 78
Query: 1612 TATET---------TEMEHKGK-------------IQERVVDASEKPAKPPVFTKKIQPC 1649
+ G I V D +
Sbjct: 79 CSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQDYRSPFIASVSDQHGVVYI 138
Query: 1650 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 1709
+ L R PD ++ +K + + +G+
Sbjct: 139 TENKNKTVVIPCLGSISNLNVSLCARYP-EKRFVPDGNRISWDSKKGFTIPSYMISYAGM 197
Query: 1710 FAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT 1769
A+ + +VV + + L+ ++VG+ +
Sbjct: 198 VFCEAKINDESYQSIMYIVVVVGYR------IYDVVLSPSHGIELSVGEKLVLNCTARTE 251
Query: 1770 KP--LDVYWLKNGKKIIPD--------IRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMN 1819
+D W K + + + L TL I D G Y C A +
Sbjct: 252 LNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASS 311
Query: 1820 NAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRIT 1879
+ + V K + G V + +
Sbjct: 312 GLMTKKNSTFVRVHEKPFV----------------AFGSGMESLVEATVGERVRIPAKYL 355
Query: 1880 GKP 1882
G P
Sbjct: 356 GYP 358
Score = 113 bits (283), Expect = 2e-25
Identities = 47/439 (10%), Positives = 96/439 (21%), Gaps = 138/439 (31%)
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKV----QGKRSIILES--------------- 809
+ + C + S S+ + K + +++
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSLDLPRLSIQKDILTIKANTTLQITCRGQRDLD 60
Query: 810 ------QLPKGMEVFISFHE---------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
Q V ++ I V D G Y C +V ++
Sbjct: 61 WLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFYRETDLASVIYVYVQD 120
Query: 855 QGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLG 914
I S + T +K +K +
Sbjct: 121 YRSPFIASVSDQHGVVYITENK----------------NKTVVIP--------------- 149
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
C + +N + + + G+RI + GF
Sbjct: 150 -----------------------CLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFT 186
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
I + +G+ C+A + + V
Sbjct: 187 ---IPSYMISYAGMVFCEAKINDESYQSIMYIVVV------------------------- 218
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
+++ K+ +C + + + +W +
Sbjct: 219 --------------VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPS 264
Query: 1095 RPFATGSRVK--------TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVIC 1146
V + +L +D V D G Y C A++ T V
Sbjct: 265 SKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRV 324
Query: 1147 KAKHDIVTESQLPDSMSAE 1165
K + S + + A
Sbjct: 325 HEKPFVAFGSGMESLVEAT 343
Score = 92.5 bits (229), Expect = 7e-19
Identities = 44/322 (13%), Positives = 83/322 (25%), Gaps = 84/322 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGS-RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+ +E F+ G + + + ++ A+ SA+Y C+A N +G
Sbjct: 483 EEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAANVSALYKCEAVNKVGRGERV 542
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
+ + I+ D++ E E
Sbjct: 543 ISFHVTR-------------------------------------GPEITLQPDMQPTEQE 565
Query: 125 NVHFDCRVE---PSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
+V C + K+G + P + + S
Sbjct: 566 SVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDT--LWKLNATMFSNSTND 623
Query: 182 FVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE- 240
++M++ D G+YVC + K V + ++ + T
Sbjct: 624 ILIMELKNASLQDQGDYVCL--AQD---RKTKKRHC------VVRQLTVLERVAPTITGN 672
Query: 241 ---------------------------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAE 273
WF +N+ L + L I E
Sbjct: 673 LENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKE 730
Query: 274 DSGIYTVKATNSKGSATTSGTL 295
D G+YT +A + G A
Sbjct: 731 DEGLYTCQACSVLGCAKVEAFF 752
Score = 90.2 bits (223), Expect = 3e-18
Identities = 19/185 (10%), Positives = 41/185 (22%), Gaps = 30/185 (16%)
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 1758
M+ + ++ + S +L P I
Sbjct: 1 MQSKVLLAVALWLCVETRAASVGLPSVSL-------------DLPRLSIQKDILTIKANT 47
Query: 1759 LARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF-TLLIIEAVVEDSGAYECVA 1817
+ + LD W N + + TL I + + D+GAY+C
Sbjct: 48 TLQITC--RGQRDLDWLWPNNQSGSEQRVEVTECSDGLFCKTLTIPKVIGNDTGAYKCFY 105
Query: 1818 MNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
+ + + + + + V + C
Sbjct: 106 RETDLASVIYVYVQDY--------------RSPFIASVSDQHGVVYITENKNKTVVIPCL 151
Query: 1878 ITGKP 1882
+
Sbjct: 152 GSISN 156
Score = 70.9 bits (173), Expect = 3e-12
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P +I WFK+ L S I L+I +R +D +YTC+A ++LG A
Sbjct: 691 SGNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKEDEGLYTCQACSVLGCAKV 748
Query: 64 TCTLKIEDR 72
IE
Sbjct: 749 EAFFIIEGA 757
Score = 46.3 bits (109), Expect = 1e-04
Identities = 9/79 (11%), Positives = 18/79 (22%), Gaps = 22/79 (27%)
Query: 1805 AVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQ 1864
V+ + CV A L + P ++
Sbjct: 4 KVLLAVALWLCVETRAASVGLPSVSL----------------------DLPRLSIQKDIL 41
Query: 1865 NVKEGSAVTLKCRITGKPR 1883
+K + + + CR
Sbjct: 42 TIKANTTLQITCRGQRDLD 60
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A
{Oryctolagus cuniculus} PDB: 2rjm_A
Length = 284
Score = 221 bits (565), Expect = 6e-65
Identities = 71/291 (24%), Positives = 120/291 (41%), Gaps = 27/291 (9%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT--- 1617
P F +P + + GE F VTG ++ W + I K+T E T
Sbjct: 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATL 63
Query: 1618 -----EMEHKGKIQ---ERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQ-ARFEVEF 1663
G+ V A+ PP F KK++P R +QD+ R+E +
Sbjct: 64 TVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKI 123
Query: 1664 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 1723
G P + W++++ I S F++ + ++L M + +EDSG + A N G A
Sbjct: 124 GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASS 183
Query: 1724 SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKI 1783
S +L V+E PP F G + ++ T P V W K+ +++
Sbjct: 184 STSLKVKE----------PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKREL 233
Query: 1784 IPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
+YK + E+ L ++ I+ D G Y+C A N+ G C + +++
Sbjct: 234 RSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284
Score = 200 bits (510), Expect = 1e-57
Identities = 57/246 (23%), Positives = 96/246 (39%), Gaps = 30/246 (12%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
PP F K + F+ G I W +++ I ++++ + L
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLT 64
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI-SSAVINVG 1757
+ +V D+G + A N GK CSA L V+E PP F+ + S ++
Sbjct: 65 VLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE----------PPRFIKKLEPSRIVKQD 114
Query: 1758 QLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVA 1817
+ R++ KI + + V W K+ +I +++ +++ L + VEDSG Y C A
Sbjct: 115 EHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEA 174
Query: 1818 MNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
N AG A L V+ E P + +G+ V L+C
Sbjct: 175 HNAAGSASSSTSLKVK-------------------EPPVFRKKPHPVETLKGADVHLECE 215
Query: 1878 ITGKPR 1883
+ G P
Sbjct: 216 LQGTPP 221
Score = 177 bits (451), Expect = 1e-49
Identities = 66/298 (22%), Positives = 120/298 (40%), Gaps = 32/298 (10%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P F L+ + L+ GE F+ G + + + + + I +
Sbjct: 6 PFFDLKPVSVD-LALGESGTFKCH--VTGTAPIKITWAKDNREIRPGGNYKMTLVENTAT 62
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L +L D G YTC A+N G+ S L V + PP+F ++ +K +
Sbjct: 63 LTVLKVTKGDAGQYTCYASNVAGKDSCSAQLG-VQE----PPRFIKKLEPSRIVKQDEHT 117
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
+EC + PE+KV W+ + I ++ +M V+++ + DSG+Y C A
Sbjct: 118 RYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAH 175
Query: 488 NNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMR 537
N + P P+F + P ++ + VH +C E + P +
Sbjct: 176 NAAGSASSSTSLKVKEP--PVF----RKKPH----PVETLKGADVHLEC--ELQGTPPFQ 223
Query: 538 IDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+ W + R +G + K + + S+ + V + D GEY C+A+N G+ +
Sbjct: 224 VSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSIT 281
Score = 172 bits (437), Expect = 8e-48
Identities = 60/324 (18%), Positives = 111/324 (34%), Gaps = 62/324 (19%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
PP F + + L +S F+C G +K+ W + + + +
Sbjct: 5 PPFFDLKPVSV-DLALGESGTFKCH--VTGTAPIKITWAKDNREIRPGGNYKMTLVENTA 61
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREME 1543
+ V D+G+Y C A+N+ G D A L
Sbjct: 62 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLG--------------------------- 94
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPE-AQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
V +E P F+ + E ++ V++ E R+ ++ G P +V+W +
Sbjct: 95 ----------V-----QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETE 139
Query: 1603 IVNEIVRKITATETT--------EMEHKG--------KIQERVVDASEKPAKPPVFTKKI 1646
I +++ E+ +E G S K +PPVF KK
Sbjct: 140 IQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKP 199
Query: 1647 QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMED 1706
P + E E G P + W ++ + S ++I + + + + + V D
Sbjct: 200 HPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSAD 259
Query: 1707 SGVFAVIAENRGGKAKCSANLVVE 1730
G + A N G C ++ ++
Sbjct: 260 IGEYQCKASNDVGSYTCVGSITLK 283
Score = 171 bits (436), Expect = 1e-47
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 17/255 (6%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W +N+ + G +K T L ++ D+G YT A+N G + S L
Sbjct: 34 PIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQL 93
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
E P F + + + + E +E + G + V + + I+ S
Sbjct: 94 GVQEP-------PRFIKKLEPSRIVKQDEHTRYECKI--GGSPEIKVLWYKDETEIQESS 144
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHI 415
+ R + VLE+ +ED+G YTC A N G A S +L+ V + PP F
Sbjct: 145 KFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLK-VKE----PPVFRKKP 199
Query: 416 KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQ 475
+E G H EC L P +V W + + + + K++S+ + I V
Sbjct: 200 HPVE-TLKGADVHLECELQ--GTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVD 256
Query: 476 SHDSGEYVCRAWNNF 490
S D GEY C+A N+
Sbjct: 257 SADIGEYQCKASNDV 271
Score = 171 bits (436), Expect = 1e-47
Identities = 64/344 (18%), Positives = 111/344 (32%), Gaps = 103/344 (29%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P F + ++D L GE+ F+ +T +K+ W + + ++ G ++
Sbjct: 5 PPFFDLKPVSVD-LALGESGTFKCHVTG--TAPIKITWAKDNREIRPGGNYKMTLVENTA 61
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE----------------- 808
L + V D GQY+C A N G+ SA + VQ I +
Sbjct: 62 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYEC 121
Query: 809 ----------------SQLPKGMEVFISFH------EISPVYPEDCGQYSCRAYNDYGEA 846
+++ + + +SF E+ + ED G Y+C A+N
Sbjct: 122 KIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAA--- 178
Query: 847 VTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHERE 906
G+ L+
Sbjct: 179 -------------------------GSASSSTSLK------------------------- 188
Query: 907 DRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK 966
++E P F P + + H EC P V W + + L +G + K
Sbjct: 189 --VKE----PPVFRKKPHPVETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKKYK 240
Query: 967 TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
+++ + I +V D G Y CKA+N G T +T+K
Sbjct: 241 IMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284
Score = 171 bits (434), Expect = 2e-47
Identities = 58/318 (18%), Positives = 106/318 (33%), Gaps = 76/318 (23%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
++D+ F C ++I W + R G K +L + V
Sbjct: 14 SVDLALGESGTFKCH--VTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKG 71
Query: 573 DSGEYICRATNKWGTAMTKAKVI--------------------------CKVL---TVIV 603
D+G+Y C A+N G A++ CK+ + V
Sbjct: 72 DAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKV 131
Query: 604 EWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 663
W+ + ++ ++R + +L++ E+SG Y C A N GS + SLK
Sbjct: 132 LWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLK--- 188
Query: 664 KTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGE 723
+ E PVF + + +G
Sbjct: 189 ----VKE-----------------------------------PPVFRKKPHPV-ETLKGA 208
Query: 724 NAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCR 783
+ H E P +V W + + +++G +++ + + I V D G+Y C+
Sbjct: 209 DVHLECE--LQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCK 266
Query: 784 AYNDYGEAVTSASMKVQG 801
A ND G S+ ++
Sbjct: 267 ASNDVGSYTCVGSITLKA 284
Score = 161 bits (409), Expect = 4e-44
Identities = 57/288 (19%), Positives = 108/288 (37%), Gaps = 48/288 (16%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
PP F S++ L G+S F+C +T +K+ W + + I KM
Sbjct: 5 PPFFDLKPVSVD-LALGESGTFKCHVT--GTAPIKITWAKDNREIRPGGNYKMTLVENTA 61
Query: 468 VMDIAYVQSHDSGEYVCRAWNN--------FIFIPPFPIFIFHQIRLPSPSQDNLDVPEA 519
+ + V D+G+Y C A N + + P FI + + V +
Sbjct: 62 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFI-------KKLEPSRIVKQD 114
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYIC 579
++C++ P +++ W+ + S+ + + L+M + DSG+Y C
Sbjct: 115 EHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTC 172
Query: 580 RATNKWGTAMTKAKVI-------------------------CKVL---TVIVEWFYNGKK 611
A N G+A + + C++ V W + ++
Sbjct: 173 EAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRE 232
Query: 612 LPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
L G +Y+ + + + IL + G Y+C+A+N GS S+
Sbjct: 233 LRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSI 280
Score = 153 bits (388), Expect = 3e-41
Identities = 61/313 (19%), Positives = 110/313 (35%), Gaps = 79/313 (25%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+KI W K+ + G + T TL++ + D+ YTC A+N+ G+
Sbjct: 28 HVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKD 87
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC- 120
+ L V + P FI L
Sbjct: 88 SCSAQLG------------------------------------VQEPPRFIKKLEPSRIV 111
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
K++E+ ++C++ G PE+KV W+ + I ++ +M
Sbjct: 112 KQDEHTRYECKIG---------G----------SPEIKVLWYKDETEIQESSKFRMSFVE 152
Query: 181 GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH-------DFGYVALDIELMLK 233
V+++ + DSG+Y C+ +N AG+ +T F +E +
Sbjct: 153 SVAVLEMYNLSVEDSGDYTCE--AHNA---AGSASSSTSLKVKEPPVFRKKPHPVETLKG 207
Query: 234 TLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKA 282
V W + + L +G K+K + ++ I+ + D G Y KA
Sbjct: 208 ADVHLECELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKA 267
Query: 283 TNSKGSATTSGTL 295
+N GS T G++
Sbjct: 268 SNDVGSYTCVGSI 280
Score = 150 bits (381), Expect = 3e-40
Identities = 60/310 (19%), Positives = 104/310 (33%), Gaps = 53/310 (17%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F V+ E+ F C V G +K+ W + + I
Sbjct: 6 PFFDLKPVSVDLALGESGTFKCHVT---------G----------TAPIKITWAKDNREI 46
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC-------------QWFVNNKPLPAGAKF 215
KM + + V D+G+Y C Q V P +F
Sbjct: 47 RPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPP-----RF 101
Query: 216 -KTTHDFGYVALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
K V D + + W+ + + +KF+ + L++
Sbjct: 102 IKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYN 161
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFE 329
EDSG YT +A N+ GSA++S +LK E P+F + + +G H E
Sbjct: 162 LSVEDSGDYTCEAHNAAGSASSSTSLKVKEP-------PVFRKKPHPVE-TLKGADVHLE 213
Query: 330 ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKW 389
G V + + + + + + + + + + IL D G Y C+A+N
Sbjct: 214 CE--LQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDV 271
Query: 390 GQAEISVNLE 399
G ++
Sbjct: 272 GSYTCVGSIT 281
Score = 146 bits (369), Expect = 1e-38
Identities = 44/229 (19%), Positives = 80/229 (34%), Gaps = 46/229 (20%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P F P + LA F+C T + + W + + + G K
Sbjct: 5 PPFFDLKPVSVDLALGESGTFKCH--VTGTAPIKITWAKDNREIRPGGNYKMTLVENTAT 62
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
L + V D+G YTC A+N G+ + S +L V+
Sbjct: 63 LTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQE------------------------- 97
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
PP F +L+ + V + ++C++ P +++ W+ +
Sbjct: 98 -----------------PPRFIKKLEPSRIVKQDEHTRYECKIG--GSPEIKVLWYKDET 138
Query: 1096 PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
S+ + + L+M + DSG+Y C A N G+A + +
Sbjct: 139 EIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSL 187
Score = 144 bits (364), Expect = 5e-38
Identities = 49/234 (20%), Positives = 89/234 (38%), Gaps = 48/234 (20%)
Query: 916 APEFLTTPTDL-TLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
P F+ + + +EC++ P + V W+ + + S+ +
Sbjct: 98 PPRFIKKLEPSRIVKQDEHTRYECKIG--GSPEIKVLWYKDETEIQESSKFRMSFVESVA 155
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
+LE+ ++ + DSG YTC+A N G A++S L VK
Sbjct: 156 VLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE------------------------ 191
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
PPVF + ++ + VH +C E + P ++ W +
Sbjct: 192 ------------------PPVFRKKPHP-VETLKGADVHLEC--ELQGTPPFQVSWHKDK 230
Query: 1095 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKA 1148
R +G + K + + S+ + V + D GEY C+A+N G+ + KA
Sbjct: 231 RELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLKA 284
Score = 142 bits (360), Expect = 1e-37
Identities = 60/306 (19%), Positives = 103/306 (33%), Gaps = 85/306 (27%)
Query: 592 AKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
C V + + W + +++ G Y+ L +L + ++G Y C A+N
Sbjct: 23 GTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASN 82
Query: 649 KYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPV 708
G D A L V + P
Sbjct: 83 VAGKDSCSAQLG-VQE-----------------------------------------PPR 100
Query: 709 FTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILE 768
F L +++ E+ +E ++ P++KV W+ + ++ S+FR +LE
Sbjct: 101 FIKKLEPSRIVKQDEHTRYECKIGG--SPEIKVLWYKDETEIQESSKFRMSFVESVAVLE 158
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK---------------RSIILE----- 808
+ + ED G Y+C A+N G A +S S+KV+ + LE
Sbjct: 159 MYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQG 218
Query: 809 ------------SQLPKGMEVFISFH------EISPVYPEDCGQYSCRAYNDYGEAVTSA 850
+L G + I I V D G+Y C+A ND G
Sbjct: 219 TPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVG 278
Query: 851 SMKVQG 856
S+ ++
Sbjct: 279 SITLKA 284
Score = 128 bits (324), Expect = 9e-33
Identities = 57/358 (15%), Positives = 102/358 (28%), Gaps = 141/358 (39%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTAFF 1307
PP F + SV + E F+ V ++ ++ +TA
Sbjct: 4 APPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTA-- 61
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
+L + V D G+Y C A N G+
Sbjct: 62 --------------------------------TLTVLKVTKGDAGQYTCYASNVAGKDSC 89
Query: 1368 KATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRF 1427
A + V ++PPRF
Sbjct: 90 SAQLG------------V------------------------------------QEPPRF 101
Query: 1428 VTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNF 1487
+ +++ + + + T++EC++ G P +KV W+ + + ++F + +
Sbjct: 102 IKKLEPSRIVKQDEHTRYECKI--GGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEM 159
Query: 1488 GWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQ 1547
+ EDSG+Y C A N G + LK
Sbjct: 160 YNLSVEDSGDYTCEAHNAAGSASSSTSLK------------------------------- 188
Query: 1548 HTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
V KE PVF +P + +G + G P +V W + + +
Sbjct: 189 ------V-----KEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRS 235
Score = 125 bits (315), Expect = 1e-31
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL 1797
G + PP F S + +G+ F ++ T P+ + W K+ ++I P YK +N
Sbjct: 1 GAMAPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENT 60
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTV 1857
TL +++ D+G Y C A N AG+ C A+L VQ E P
Sbjct: 61 ATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQ-------------------EPPRF 101
Query: 1858 AEPLKD-QNVKEGSAVTLKCRITGKPR 1883
+ L+ + VK+ +C+I G P
Sbjct: 102 IKKLEPSRIVKQDEHTRYECKIGGSPE 128
Score = 89.8 bits (223), Expect = 2e-19
Identities = 45/271 (16%), Positives = 80/271 (29%), Gaps = 103/271 (38%)
Query: 1262 EEPPRFITEIESV-TVQEAEPVRFETRVE----PRV-----------DPRLRVECSLSTA 1305
+EPPRFI ++E V++ E R+E ++ +V + R+
Sbjct: 96 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMS------ 149
Query: 1306 FFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
F L++ + ED G+Y C A+N G A
Sbjct: 150 ----------------------------FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSA 181
Query: 1366 FTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPP 1425
+ ++ V K+PP
Sbjct: 182 SSSTSLK------------V------------------------------------KEPP 193
Query: 1426 RFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVA 1484
F + EC+ G P +V W + + L ++ + + +
Sbjct: 194 VFRKKP--HPVETLKGADVHLECE--LQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTS 249
Query: 1485 MNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
++ V D GEY C+A+N G +
Sbjct: 250 IHILNVDSADIGEYQCKASNDVGSYTCVGSI 280
Score = 77.1 bits (190), Expect = 3e-15
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 3/93 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PP F + +D+ F C ++I W + R G K
Sbjct: 5 PPFFDLKPVS-VDLALGESGTFKCH--VTGTAPIKITWAKDNREIRPGGNYKMTLVENTA 61
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+L + V D+G+Y C A+N G A++
Sbjct: 62 TLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLG 94
Score = 75.5 bits (186), Expect = 1e-14
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
E + P ++ W K+ L G + + + L ++ I ++ + D Y CKA+N +G
Sbjct: 215 ELQGTPPFQVSWHKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSY 274
Query: 62 VSTCTLKIE 70
++ ++
Sbjct: 275 TCVGSITLK 283
Score = 52.4 bits (126), Expect = 6e-07
Identities = 21/126 (16%), Positives = 36/126 (28%), Gaps = 49/126 (38%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----------DPRLRVECSLSTAF 1306
+EPP F + V + V E ++ +V + ++
Sbjct: 190 KEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELRSGKKYKI-------- 241
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
+ + S+ I V D GEY C+A ND G
Sbjct: 242 --------------------------MSENFLTSIHILNVDSADIGEYQCKASNDVGSYT 275
Query: 1367 TKATIS 1372
+I+
Sbjct: 276 CVGSIT 281
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker,
immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Length = 642
Score = 230 bits (587), Expect = 6e-64
Identities = 96/730 (13%), Positives = 187/730 (25%), Gaps = 152/730 (20%)
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
E + V P K + V P + +++
Sbjct: 12 AEGKEVLLLVHNLPQHLFGYSWYKG-ERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPN 70
Query: 181 GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV---- 236
+ I + +D+G Y V L + + +
Sbjct: 71 A--SLLIQNIIQNDTGFYTLH--VIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDK 126
Query: 237 -------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKAT 283
W+VNN+ LP + + ++ L + D+ Y +
Sbjct: 127 DAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQ 184
Query: 284 NSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVE 343
N + + L V + ++ + S GE + +
Sbjct: 185 NPVSARRSDSV-----ILNVLYGPDAPTISPLNTS-YRSGENLNLSCH--AASNPPAQYS 236
Query: 344 FLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
+ NG +++ L I + ++G YTC+A N +
Sbjct: 237 WFVNGTFQQSTQE-----------LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTT--IT 283
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
+PPK + ++D D+ C W+ N + + R+++ +D
Sbjct: 284 VYAEPPKPFITSNNSNPVEDEDAVALTC---EPEIQNTTYLWWVNNQSLPVSPRLQLSND 340
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWNNF--IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGK 521
+ + V +D G Y C N P + + + P+ S
Sbjct: 341 NRTLT--LLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVN 398
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 581
+ C S+P + W +G L + + ++SG Y C+A
Sbjct: 399 LSLSC--HAASNPPAQYSWLIDGNIQQHTQ-----------ELFISNITEKNSGLYTCQA 445
Query: 582 TNKWGTAMTKAKVICKVLTVI-------------------------------VEWFYNGK 610
N V + W+ NG+
Sbjct: 446 NNSASGHSRTTVKTITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQNTTYLWWVNGQ 505
Query: 611 KLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILE 670
LP R + + L + ++ Y C N ++
Sbjct: 506 SLPVSPRLQLSNGNR--TLTLFNVTRNDARAYVCGIQNSVSAN----------------- 546
Query: 671 SQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEAR 730
R++ ++ P + G N +
Sbjct: 547 ------------------------RSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCH 582
Query: 731 LTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGE 790
+P + W NG P + L I+ + P + G Y+C N
Sbjct: 583 --SASNPSPQYSWRINGIPQQHTQV-----------LFIAKITPNNNGTYACFVSNLATG 629
Query: 791 AVTSASMKVQ 800
S +
Sbjct: 630 RNNSIVKSIT 639
Score = 222 bits (566), Expect = 4e-61
Identities = 90/617 (14%), Positives = 179/617 (29%), Gaps = 134/617 (21%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+ W+ N L + R++ + TL++ ++ +D+A Y C+ N + S
Sbjct: 138 QDATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSD-- 193
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ L P + + EN+
Sbjct: 194 ----------SVILNVLYGP----------------------DAPTISPLNTSYRSGENL 221
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
+ C + P + WF NG +
Sbjct: 222 NLSCHAASN-------------------PPAQYSWFVNGTFQQSTQELF----------- 251
Query: 187 IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE------ 240
I + ++SG Y CQ +N TT + P +
Sbjct: 252 IPNITVNNSGSYTCQ--AHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVAL 309
Query: 241 ------------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGS 288
W+VNN+ LP + + ++D L ++ D G Y N
Sbjct: 310 TCEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNRT--LTLLSVTRNDVGPYECGIQNELSV 367
Query: 289 ATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNG 348
+ + L V + ++ + G + +L +G
Sbjct: 368 DHSDPVI-----LNVLYGPDDPTISPSYT-YYRPGVNLSLSCH--AASNPPAQYSWLIDG 419
Query: 349 KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQP 408
+ + L I +++G+YTC+A N + + +
Sbjct: 420 NIQQHTQE-----------LFISNITEKNSGLYTCQANNSASGHSRTTVKT-I-TVSAEL 466
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 468
PK + + + ++D D+ F C W+ NG+ + R+++ +
Sbjct: 467 PKPSISSNNSKPVEDKDAVAFTCE---PEAQNTTYLWWVNGQSLPVSPRLQLSNGNR--T 521
Query: 469 MDIAYVQSHDSGEYVCRAWNNF--IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
+ + V +D+ YVC N+ P + + + P S + ++ C
Sbjct: 522 LTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSC 581
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
S+P+ + W NG P L + + ++G Y C +N
Sbjct: 582 HSA--SNPSPQYSWRINGIPQQHTQ-----------VLFIAKITPNNNGTYACFVSNLAT 628
Query: 587 TAMTKAKVICKVLTVIV 603
V ++ V
Sbjct: 629 GRNNSI-----VKSITV 640
Score = 212 bits (542), Expect = 5e-58
Identities = 113/729 (15%), Positives = 194/729 (26%), Gaps = 193/729 (26%)
Query: 339 TMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
V P A ++ L I DTG YT E +
Sbjct: 46 IGYVIGTQQATPGPAYSGREIIYPNA--SLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQ 103
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 458
V + PK + + + ++D D+ F C + W+ N + + R+
Sbjct: 104 FRV---YPELPKPSISSNNSKPVEDKDAVAFTCE---PETQDATYLWWVNNQSLPVSPRL 157
Query: 459 KMVSDFGFVVMDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRL 506
++ + + + V +D+ Y C N N ++ P P
Sbjct: 158 QLSNGNRTLT--LFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPDAPTI------- 208
Query: 507 PSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDM 566
S N ++ C S+P + WF NG + L +
Sbjct: 209 ---SPLNTSYRSGENLNLSC--HAASNPPAQYSWFVNGTFQQSTQE-----------LFI 252
Query: 567 DYVYARDSGEYICRATNKWGTAMTKAKVICKV------------------------LTVI 602
+ +SG Y C+A N V LT
Sbjct: 253 PNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCE 312
Query: 603 VE-------WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
E W+ N + LP R + +D L +L + G YEC N+ D
Sbjct: 313 PEIQNTTYLWWVNNQSLPVSPRLQLSNDNRT--LTLLSVTRNDVGPYECGIQNELSVD-- 368
Query: 656 KASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSN 715
++ + P +
Sbjct: 369 ---------------------------------------HSDPVILNVLYGPDDPTISPS 389
Query: 716 IDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPE 775
R G N +P + W +G + L IS + +
Sbjct: 390 YTYYRPGVNLSLSCHAAS--NPPAQYSWLIDGNIQQHTQE-----------LFISNITEK 436
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQY 835
+ G Y+C+A N + +I + ++LPK IS + PV +D +
Sbjct: 437 NSGLYTCQANNSASGHSRTTVK------TITVSAELPK---PSISSNNSKPVEDKDAVAF 487
Query: 836 SCRAYNDYGEAVT----SASMKVQGKRSIILE-SQLPKGMEGTIDKIAELEGYGHEREDR 890
+C S+ V + + L T+ + R D
Sbjct: 488 TCEP-EAQNTTYLWWVNGQSLPVSPRLQLSNGNRTL------TLFNV--------TRND- 531
Query: 891 TIDKIAELEG---------YGHEREDRIEEDLGKAPEFLT-TPTDLTLAESTLAHFECRL 940
R D + D+ P+ +P D + + C
Sbjct: 532 --------ARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCH- 582
Query: 941 TPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEA 1000
++PS W NG L I + ++G Y C +N
Sbjct: 583 -SASNPSPQYSWRINGIPQQHTQV-----------LFIAKITPNNNGTYACFVSNLATGR 630
Query: 1001 TTSCKLTVK 1009
S ++
Sbjct: 631 NNSIVKSIT 639
Score = 212 bits (540), Expect = 8e-58
Identities = 103/737 (13%), Positives = 178/737 (24%), Gaps = 199/737 (27%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV----------------TLSINSLRA 44
V W+K I +L I ++
Sbjct: 21 VHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQ 80
Query: 45 DDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPEL 104
+D+ YT +E
Sbjct: 81 NDTGFYTLHVIKSDLVN---------------------------------EEATGQFRVY 107
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
IS N ++ + V F C E + W+ N
Sbjct: 108 PELPKPSISSNNSKPVEDKDAVAFTCEPE--------------------TQDATYLWWVN 147
Query: 165 GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH--DFG 222
+ + R+++ + + + V +D+ Y C N P A+ + +
Sbjct: 148 NQSLPVSPRLQLSNGNRTLT--LFNVTRNDTASYKC--ETQN---PVSARRSDSVILNVL 200
Query: 223 YVALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVA 264
Y + WFVN + +
Sbjct: 201 YGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQSTQE----------- 249
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I +SG YT +A NS + + V P + + + + + +
Sbjct: 250 LFIPNITVNNSGSYTCQAHNSDTGLNRTTVT----TITVYAEPPKPFITSNNSNPVEDED 305
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 384
Q T + N + + S R++ + L +L D G Y C
Sbjct: 306 AVALT---CEPEIQNTTYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECG 360
Query: 385 ATNKWGQAEI-SVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKV 443
N+ V L + P T + G + C +P +
Sbjct: 361 IQNELSVDHSDPVILNVLYG----PDDPTISPSYTY-YRPGVNLSLSCHAAS--NPPAQY 413
Query: 444 EWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN-----------NFIF 492
W +G H + I+ + +SG Y C+A N
Sbjct: 414 SWLIDGNIQQHTQELF-----------ISNITEKNSGLYTCQANNSASGHSRTTVKTITV 462
Query: 493 IPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR 552
P S ++ V + V F C EP++ T W+ NG+ R
Sbjct: 463 SAELPKPS-------ISSNNSKPVEDKDAVAFTC--EPEAQNT-TYLWWVNGQSLPVSPR 512
Query: 553 VKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK--------------------- 591
++ +L + V D+ Y+C N +
Sbjct: 513 LQLSNGNR--TLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSS 570
Query: 592 ------AKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVY 642
+ C + W NG H L I N+G Y
Sbjct: 571 YLSGANLNLSCHSASNPSPQYSWRINGIPQQHTQV-----------LFIAKITPNNNGTY 619
Query: 643 ECRATNKYGSDVTKASL 659
C +N
Sbjct: 620 ACFVSNLATGRNNSIVK 636
Score = 211 bits (539), Expect = 9e-58
Identities = 103/696 (14%), Positives = 187/696 (26%), Gaps = 178/696 (25%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ + P PA + + + +L I D+G YT+ S +
Sbjct: 46 IGYVIGTQQATPGPAYSGREIIYPNA--SLLIQNIIQNDTGFYTLHVIKSDLVNEEATG- 102
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEA 353
+ V P S+ + + + + F E T + N + +
Sbjct: 103 ----QFRVYPELPKPSISSNNSKPVEDKDAVAFTCEPETQDA-----TYLWWVNNQSLPV 153
Query: 354 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA---EISVNLECVDKSKGQPPK 410
S R++ + L + DT Y C N + +N+ P
Sbjct: 154 SPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNPVSARRSDSVILNV------LYGPDA 205
Query: 411 FTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 470
T + + G++ + C +P + WF NG +
Sbjct: 206 PTISPLNTS-YRSGENLNLSCHAAS--NPPAQYSWFVNGTFQQSTQELF----------- 251
Query: 471 IAYVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDNLDVPE 518
I + ++SG Y C+A N+ ++ P FI S ++ V +
Sbjct: 252 IPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFI--------TSNNSNPVED 303
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 578
V C EP+ T W+ N + R++ D +L + V D G Y
Sbjct: 304 EDAVALTC--EPEIQNT-TYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYE 358
Query: 579 CRATNKWGTAMTKA---------------------------KVICKV---LTVIVEWFYN 608
C N+ + + C W +
Sbjct: 359 CGIQNELSVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLID 418
Query: 609 GKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLI 668
G H + I +I E+NSG+Y C+A N +
Sbjct: 419 GNIQQHTQE--------LFISNIT---EKNSGLYTCQANNSASGHSRTTVKT-I------ 460
Query: 669 LESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFE 728
+ P ++ +N + + + F
Sbjct: 461 --------------------------------TVSAELPKPSISSNNSKPVEDKDAVAFT 488
Query: 729 ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDY 788
P W+ NG+ + R + L + V D Y C N
Sbjct: 489 CE--PEAQNT-TYLWWVNGQSLPVSPRLQLSNGNR--TLTLFNVTRNDARAYVCGIQNSV 543
Query: 789 GEAVT-SASMKVQGKRSIIL----ESQLPKGMEVFISFH--------------------- 822
+ ++ V + +S G + +S H
Sbjct: 544 SANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSASNPSPQYSWRINGIPQQHT 603
Query: 823 ---EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I+ + P + G Y+C N S +
Sbjct: 604 QVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSIT 639
Score = 198 bits (504), Expect = 3e-53
Identities = 106/802 (13%), Positives = 182/802 (22%), Gaps = 258/802 (32%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY---------- 473
G P W+ + ++ + V AY
Sbjct: 14 GKEVLLLVHNLP--QHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNA 71
Query: 474 ------VQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSP---SQDNLDVPEAGKVHF 524
+ +D+G Y + + LP P S ++ V + V F
Sbjct: 72 SLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISSNNSKPVEDKDAVAF 131
Query: 525 DCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNK 584
C EP++ W+ N + R++ ++L V D+ Y C N
Sbjct: 132 TC--EPETQDA-TYLWWVNNQSLPVSPRLQLSNGNRTLTLFN--VTRNDTASYKCETQNP 186
Query: 585 WGTAMTK---------------------------AKVICKVL---TVIVEWFYNGKKLPH 614
+ + C WF NG
Sbjct: 187 VSARRSDSVILNVLYGPDAPTISPLNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQQS 246
Query: 615 GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLP 674
L I NSG Y C+A N
Sbjct: 247 TQE-----------LFIPNITVNNSGSYTCQAHNSDTGL--------------------- 274
Query: 675 EGMEGGLEKIQTLEDAAHLRRTETADIE-HRQAPVFTVPLSNIDDLREGENAHFEARLTP 733
RT I + + P + +N + + + + P
Sbjct: 275 -------------------NRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVALTCE--P 313
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT 793
W+ N + + R + D L + V D G Y C N+ +
Sbjct: 314 EIQN-TTYLWWVNNQSLPVSPRLQLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVDHS 370
Query: 794 -SASMKVQGKRSIILES----QLPKGMEVFISFH------------------------EI 824
+ V S G+ + +S H I
Sbjct: 371 DPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHTQELFI 430
Query: 825 SPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYG 884
S + ++ G Y+C+A N +
Sbjct: 431 SNITEKNSGLYTCQANNSA----------------------------SGHSRTTVK---- 458
Query: 885 HEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTN 944
TI AEL +++ + + F C
Sbjct: 459 ------TITVSAEL-----------------PKPSISSNNSKPVEDKDAVAFTCE---PE 492
Query: 945 DPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSC 1004
+ T W+ NG++L R++ N L + +V D+ Y C N +
Sbjct: 493 AQNTTYLWWVNGQSLPVSPRLQLSNGNR--TLTLFNVTRNDARAYVCGIQNSVSANRSDP 550
Query: 1005 -KLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDN 1063
L V P +
Sbjct: 551 VTLDVLY------------------------------------------GPDTPIISPPD 568
Query: 1064 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARD 1123
++ C S+P+ + W NG P L + + +
Sbjct: 569 SSYLSGANLNLSCHSA--SNPSPQYSWRINGIPQQHTQ-----------VLFIAKITPNN 615
Query: 1124 SGEYICRATNKWGTAMTKAKVI 1145
+G Y C +N
Sbjct: 616 NGTYACFVSNLATGRNNSIVKS 637
Score = 184 bits (469), Expect = 1e-48
Identities = 65/560 (11%), Positives = 125/560 (22%), Gaps = 154/560 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L + V D Y C N + ++ L
Sbjct: 165 TLTLFNVTRNDTASYKCETQNPVSARRSD---------SVILNVLYG------------- 202
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
P ++ C +P +
Sbjct: 203 ------------------------PDAPTISPLNT-SYRSGENLNLSCH--AASNPPAQY 235
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
WF+NG I + + +SG Y C+A N + T
Sbjct: 236 SWFVNGTFQQSTQELF-IPN----------ITVNNSGSYTCQAHNSDTGLNRTTVTTIT- 283
Query: 1520 KPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEP 1579
+ F++ + V++ +
Sbjct: 284 -------------------------------------VYAEPPKPFITSNNSNPVEDEDA 306
Query: 1580 ARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT------EMEHKGKIQ-----ER 1628
+W +N ++ +++ T G + E
Sbjct: 307 VALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNEL 365
Query: 1629 VVDASEK-----PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS 1683
VD S+ P T +P W + +
Sbjct: 366 SVDHSDPVILNVLYGPDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNIQQHT 425
Query: 1684 PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPP 1743
L + + ++SG++ A N + + + +P
Sbjct: 426 -----------QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAE------LPK 468
Query: 1744 SFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLII 1803
+++ +S + F + A W NG+ + R + + TL +
Sbjct: 469 PSISSNNSKPVEDKDAVAFTCEPEAQ-NTTYLWWVNGQSLPVSPRLQLSNGNR--TLTLF 525
Query: 1804 EAVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLK 1862
D+ AY C N+ R L V T
Sbjct: 526 NVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG------------------PDTPIISPP 567
Query: 1863 DQNVKEGSAVTLKCRITGKP 1882
D + G+ + L C P
Sbjct: 568 DSSYLSGANLNLSCHSASNP 587
Score = 169 bits (429), Expect = 1e-43
Identities = 78/633 (12%), Positives = 135/633 (21%), Gaps = 154/633 (24%)
Query: 1266 RFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLH 1325
+ E V E + V P+ I +
Sbjct: 1 KLTIESTPFNVAEGKEVLLLVHNLPQHLFGYSW---YKGERVDGNRQIIGYVIGTQQATP 57
Query: 1326 AVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQV 1385
+S SL I + D G Y + T Q +
Sbjct: 58 GPAYSGREIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVN---------EEATGQFRVYP 108
Query: 1386 PKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKF 1445
+ P+ + + + F
Sbjct: 109 -------------------------------------ELPKPSISSNNSKPVEDKDAVAF 131
Query: 1446 ECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNL 1505
C+ + W++N + LP R + V D+ Y C N
Sbjct: 132 TCE---PETQDATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFNVTRNDTASYKCETQNP 186
Query: 1506 YGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVF 1565
+ ++ L P
Sbjct: 187 VSARRSDSV-------------------------------------ILNVLYGP---DAP 206
Query: 1566 VSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE---IVRKITATET----- 1616
P + GE C P + W +NG + + IT +
Sbjct: 207 TISPLNTSYRSGENLNLSCH-AASNPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTC 265
Query: 1617 ------TEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT 1670
T + V KP + ++ ++D E + T
Sbjct: 266 QAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVE-----DEDAVALTCEPEIQN-TT 319
Query: 1671 IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVV 1729
W+ + + SP Q+ + L + V D G + +N L V
Sbjct: 320 YLWWVNNQSLPVSPRLQLSNDN--RTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNV 377
Query: 1730 EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRY 1789
P + S G ++ P WL +G
Sbjct: 378 LYG---------PDDPTISPSYTYYRPGVNLSLSCHAASNPPAQYSWLIDGN-------- 420
Query: 1790 KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAV 1849
+ L I ++SG Y C A N+A +
Sbjct: 421 -IQQHTQ--ELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAEL----------- 466
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ V++ AV C +
Sbjct: 467 ----PKPSISSNNSKPVEDKDAVAFTCEPEAQN 495
Score = 166 bits (422), Expect = 1e-42
Identities = 64/504 (12%), Positives = 116/504 (23%), Gaps = 123/504 (24%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L I + + G Y C+A+N + +
Sbjct: 249 ELFIPNITVNNSGSYTCQAHNSDTGL--------NRTTVTTITVYAE------------- 287
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
PP+ + + + + C N
Sbjct: 288 ------------------------PPKPFITSNNSNPVEDEDAVALTC---EPEIQNTTY 320
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
W++N + LP R D + + V D G Y C N +D + ++
Sbjct: 321 LWWVNNQSLPVSPRLQLSNDNRTLTLLS--VTRNDVGPYECGIQNELSVDHSDPVI---- 374
Query: 1520 KPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEP 1579
L P P + G
Sbjct: 375 ---------------------------------LNVLYGP---DDPTISPSYTYYRPGVN 398
Query: 1580 ARFCTRVTGYPRPRVMWLINGHTIVNE---IVRKITATET------TEMEHKGKIQERVV 1630
P + WLI+G+ + + IT + G + V
Sbjct: 399 LSLSCHAASNPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVK 458
Query: 1631 DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
+ P ++D F E + T W+ + SP Q+
Sbjct: 459 TITVSAELPKPSISSNNSKPVEDKDAVAFTCEPEAQN-TTYLWWVNGQSLPVSPRLQL-- 515
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTI 1749
+ L + V D+ + +N + L V P + + +
Sbjct: 516 SNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYG---------PDTPIISP 566
Query: 1750 SSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVED 1809
+ G ++ W NG + L I + +
Sbjct: 567 PDSSYLSGANLNLSCHSASNPSPQYSWRINGI---------PQQHTQ--VLFIAKITPNN 615
Query: 1810 SGAYECVAMNNAGEARCEAELVVQ 1833
+G Y C N A +
Sbjct: 616 NGTYACFVSNLATGRNNSIVKSIT 639
Score = 107 bits (269), Expect = 1e-23
Identities = 65/459 (14%), Positives = 112/459 (24%), Gaps = 134/459 (29%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI------------- 766
EG+ P W+ +
Sbjct: 12 AEGKEVLLLVHNLPQ--HLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYP 69
Query: 767 ---LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHE 823
L I + D G Y+ + + +LPK IS +
Sbjct: 70 NASLLIQNIIQNDTGFYTLHVIKSDLVNEEA-------TGQFRVYPELPK---PSISSNN 119
Query: 824 ISPVYPEDCGQYSCRA----------YNDYGEAVTSASMKVQGKRSIILESQLPKGMEGT 873
PV +D ++C N+ V+ G R++ L +
Sbjct: 120 SKPVEDKDAVAFTCEPETQDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFN--------- 170
Query: 874 IDKIAELEGYGHEREDRTIDKIAELEG---------YGHEREDRIEEDLGKAPEFLT-TP 923
R D R D + ++ P+ T +P
Sbjct: 171 -----------VTRNDT---------ASYKCETQNPVSARRSDSVILNVLYGPDAPTISP 210
Query: 924 TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYL 983
+ + + C ++P WF NG + L I ++ +
Sbjct: 211 LNTSYRSGENLNLSC--HAASNPPAQYSWFVNGTFQQSTQE-----------LFIPNITV 257
Query: 984 RDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDE 1043
+SG YTC+A N + T+
Sbjct: 258 NNSGSYTCQAHNSDTGLNRTTVTTITVY-------------------------------- 285
Query: 1044 LIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 1103
PP ++ V + V C EP+ T W+ N + R+
Sbjct: 286 -------AEPPKPFITSNNSNPVEDEDAVALTC--EPEIQNT-TYLWWVNNQSLPVSPRL 335
Query: 1104 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
+ D +L + V D G Y C N+ +
Sbjct: 336 QLSNDNR--TLTLLSVTRNDVGPYECGIQNELSVDHSDP 372
Score = 100 bits (251), Expect = 1e-21
Identities = 30/260 (11%), Positives = 68/260 (26%), Gaps = 47/260 (18%)
Query: 1642 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI----- 1696
T + P E + V L W++ + + + ++
Sbjct: 2 LTIESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAY 61
Query: 1697 -----------LIMRQVFMEDSGVFAVIAENR-GGKAKCSANLVVEEKRQGGRGGVVPPS 1744
L+++ + D+G + + + + V +P
Sbjct: 62 SGREIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYP--------ELPKP 113
Query: 1745 FLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIE 1804
+++ +S + F + T+ W N + + R + + TL +
Sbjct: 114 SISSNNSKPVEDKDAVAFTCEPE-TQDATYLWWVNNQSLPVSPRLQLSNGNR--TLTLFN 170
Query: 1805 AVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKD 1863
D+ +Y+C N R L V +
Sbjct: 171 VTRNDTASYKCETQNPVSARRSDSVILNVL------------------YGPDAPTISPLN 212
Query: 1864 QNVKEGSAVTLKCRITGKPR 1883
+ + G + L C P
Sbjct: 213 TSYRSGENLNLSCHAASNPP 232
Score = 71.5 bits (175), Expect = 1e-12
Identities = 29/236 (12%), Positives = 51/236 (21%), Gaps = 63/236 (26%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI------ 975
T +AE P + W+ + I +
Sbjct: 5 ESTPFNVAEGKEVLLLVHNLPQHLF--GYSWYKGERVDGNRQIIGYVIGTQQATPGPAYS 62
Query: 976 ----------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFA 1025
L I ++ D+G YT
Sbjct: 63 GREIIYPNASLLIQNIIQNDTGFYTLHVIKSDL-VNEEATGQF----------------- 104
Query: 1026 NATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT 1085
P P + ++ V + V F C EP++
Sbjct: 105 ----------------------RVYPELPKPSISSNNSKPVEDKDAVAFTC--EPETQDA 140
Query: 1086 MRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 1141
W+ N + R++ ++L V D+ Y C N +
Sbjct: 141 -TYLWWVNNQSLPVSPRLQLSNGNRTLTLFN--VTRNDTASYKCETQNPVSARRSD 193
Score = 58.8 bits (142), Expect = 1e-08
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 11/65 (16%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
++P+ + W NG+P L I + +++ Y C +NL ++
Sbjct: 585 SNPSPQYSWRINGIPQQHTQ-----------VLFIAKITPNNNGTYACFVSNLATGRNNS 633
Query: 65 CTLKI 69
I
Sbjct: 634 IVKSI 638
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin
superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus
norvegicus}
Length = 403
Score = 205 bits (523), Expect = 8e-58
Identities = 80/440 (18%), Positives = 131/440 (29%), Gaps = 86/440 (19%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
++ FV++ + + C A ++W +G L
Sbjct: 19 RRSLHFVSEPSDAVTMRG-GNVLLNCS-AESDRGVPVIKWKKDGLILALGMDDRKQQLPN 76
Query: 1482 ----YVAMNFGWVYPEDSGEYLCRAT-NLYGMDETRAILKTTGKPGIIYESQLPKGMKSI 1536
+ + D G Y C A+ G +R P
Sbjct: 77 GSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGP--------------- 121
Query: 1537 EKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMW 1596
F+SQ E+ G+ V G P P + W
Sbjct: 122 --------------------------LRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHW 155
Query: 1597 LINGHTI-VNEIVRKITATET-------TEMEHKGKIQ---------------ERVVDAS 1633
N + ++ + + G + E + +
Sbjct: 156 QKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSD 215
Query: 1634 EKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 1693
+ F ++ A E A E G P P+ W R + I ++
Sbjct: 216 PGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSK--KYSLLG 273
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV 1753
S L++ V +DSG + + + SA L V VPP FL S+
Sbjct: 274 GSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVL----------VPPWFLNHPSNLY 323
Query: 1754 INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAY 1813
F+ +S V W+KNG +IP ++ + L I+ V D G Y
Sbjct: 324 AYESMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGS---NLRILGVVKSDEGFY 380
Query: 1814 ECVAMNNAGEARCEAELVVQ 1833
+CVA N AG A+ A+L+V
Sbjct: 381 QCVAENEAGNAQSSAQLIVP 400
Score = 183 bits (465), Expect = 4e-50
Identities = 68/350 (19%), Positives = 111/350 (31%), Gaps = 53/350 (15%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE------------ 1606
+ + FVS+P G C+ + P + W +G +
Sbjct: 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGS 78
Query: 1607 -IVRKITATETTE-----------MEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQ 1654
+++ I + + + G I R A A P F + + AF
Sbjct: 79 LLIQNILHSRHHKPDEGLYQCEASLGDSGSIISR--TAKVMVAGPLRFLSQTESITAFMG 136
Query: 1655 DQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 1714
D + E GDP+PTI W + + P L + ++ DSGV+ A
Sbjct: 137 DTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSA 196
Query: 1715 ENRGG-KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD 1773
N + A + + R FL S+ + G+ A + +S P
Sbjct: 197 RNPASTRTGNEAEVRILSDPGLHR----QLYFLQRPSNVIAIEGKDAVLECCVSGYPPPS 252
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
WL+ + I + +L + LLI +DSG Y CV AEL V
Sbjct: 253 FTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVL 310
Query: 1834 SKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + E + +C ++GKP
Sbjct: 311 -------------------VPPWFLNHPSNLYAYESMDIEFECAVSGKPV 341
Score = 164 bits (417), Expect = 7e-44
Identities = 75/468 (16%), Positives = 124/468 (26%), Gaps = 120/468 (25%)
Query: 384 RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKV 443
R ++ + + + F S ++ G + C+ + +
Sbjct: 2 RWGSELESSHHHHHH-----GGRRSLHFVSEPSDAVTMR-GGNVLLNCSAES-DRGVPVI 54
Query: 444 EWFHNGKPIFHK--NRVKMVSDFGFVV--MDIAYVQSHDSGEYVCRAWNNF--------- 490
+W +G + +R + + + ++ + + D G Y C A
Sbjct: 55 KWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTA 114
Query: 491 -IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP--F 547
+ + F+ ++ V C DP I W N +
Sbjct: 115 KVMVAGPLRFL----SQTE----SITAFMGDTVLLKCE--VIGDPMPTIHWQKNQQDLNP 164
Query: 548 ATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK---------------- 591
G V G +L + + DSG Y C A N T
Sbjct: 165 IPGDSRVVVLPSG--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQL 222
Query: 592 ----------------AKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDIL 632
A + C V W + + + + L I
Sbjct: 223 YFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGSN--LLIS 280
Query: 633 YCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAH 692
+++SG Y C T K + A L +L
Sbjct: 281 NVTDDDSGTYTCVVTYKNENISASAELT-------VLV---------------------- 311
Query: 693 LRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKT 752
P F SN+ E + FE + P V W NG +
Sbjct: 312 -------------PPWFLNHPSNLY-AYESMDIEFECA--VSGKPVPTVNWMKNGDVVIP 355
Query: 753 GSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
F+ L I V D G Y C A N+ G A +SA + V
Sbjct: 356 SDYFQIVGG-SN--LRILGVVKSDEGFYQCVAENEAGNAQSSAQLIVP 400
Score = 164 bits (416), Expect = 9e-44
Identities = 74/387 (19%), Positives = 127/387 (32%), Gaps = 55/387 (14%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFG----YVALDIVGAYAEDSGIYTVKATNSKGSATT 291
VP +W + L G + + + D G+Y +A+ +
Sbjct: 51 VPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSII 110
Query: 292 SGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI 351
S T ++ V F Q + ++ G+ + +GD T+ + N + +
Sbjct: 111 SRTA----KVMV-AGPLRFLSQTESIT-AFMGDTVLLKCE--VIGDPMPTIHWQKNQQDL 162
Query: 352 EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKSKG 406
V L+I + D+GVY C A N AE+ + D
Sbjct: 163 NPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRIL---SDPGLH 219
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+ F ++ + +G A EC ++ P W + I +++ +
Sbjct: 220 RQLYFLQRPSNVIAI-EGKDAVLECCVS--GYPPPSFTWLRGEEVIQLRSKKYSLLGGS- 275
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDV 516
+ I+ V DSG Y C + +PP PS NL
Sbjct: 276 -NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPP-------WFLNH-PS--NLYA 324
Query: 517 PEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGE 576
E+ + F+C P ++W NG + V +L + V D G
Sbjct: 325 YESMDIEFEC--AVSGKPVPTVNWMKNGDVVIPSDYFQIVGG-S--NLRILGVVKSDEGF 379
Query: 577 YICRATNKWGTAMTKAKVICKVLTVIV 603
Y C A N+ G A + A+ L V
Sbjct: 380 YQCVAENEAGNAQSSAQ-----LIVPK 401
Score = 164 bits (416), Expect = 1e-43
Identities = 81/493 (16%), Positives = 138/493 (27%), Gaps = 152/493 (30%)
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG--SR 755
R++ F S+ G N D ++W +G + G R
Sbjct: 13 HHHHGGRRSLHFVSEPSDAV-TMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDR 70
Query: 756 FRTFCDFGFVI--LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ--GKRSIILESQ- 810
+ + +I + S + D G Y C A ++ S + KV G + +++
Sbjct: 71 KQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTES 130
Query: 811 -----------------LPK--------GMEVFISFHE------------ISPVYPEDCG 833
P ++ + IS + P D G
Sbjct: 131 ITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSG 190
Query: 834 QYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTI 892
Y C A N A +++ +
Sbjct: 191 VYRCSARNPASTRTGNEAEVRILSDPGLH------------------------------- 219
Query: 893 DKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW 952
+ FL P+++ E A EC + P + W
Sbjct: 220 ----------------------RQLYFLQRPSNVIAIEGKDAVLECC--VSGYPPPSFTW 255
Query: 953 FHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQ 1012
+ + S+ ++ L I++V DSG YTC T K+ + S +LTV
Sbjct: 256 LRGEEVIQLRSKKYSLLGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVL--- 310
Query: 1013 GIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKV 1072
PP F + + L E+ +
Sbjct: 311 ---------------------------------------VPPWFLNHPSN-LYAYESMDI 330
Query: 1073 HFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRAT 1132
F+C P ++W NG + V +L + V D G Y C A
Sbjct: 331 EFEC--AVSGKPVPTVNWMKNGDVVIPSDYFQIVGG-S--NLRILGVVKSDEGFYQCVAE 385
Query: 1133 NKWGTAMTKAKVI 1145
N+ G A + A++I
Sbjct: 386 NEAGNAQSSAQLI 398
Score = 160 bits (405), Expect = 3e-42
Identities = 76/411 (18%), Positives = 130/411 (31%), Gaps = 69/411 (16%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
S F+S +D NV +C E + ++W +
Sbjct: 18 GRRSLHFVSEPSDAVTMRGGNVLLNCSAES------------------DRGVPVIKWKKD 59
Query: 165 GKPIFHK--NRVKMVSDFGFVV--MDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHD 220
G + +R + + + ++ + + D G Y C+ + + +T
Sbjct: 60 GLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDS---GSIISRTAKV 116
Query: 221 FGYVALDIELMLKTLV------------------PFTEWFVNNKPL---PAGAKFKTTHD 259
L +++ P W N + L P ++
Sbjct: 117 MVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPS 176
Query: 260 FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSN 319
G AL I DSG+Y A N + T + + H F + ++
Sbjct: 177 -G--ALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVI- 232
Query: 320 LSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIED 377
EG+ A E S G + +L + I+ + ++ L I +D
Sbjct: 233 AIEGKDAVLECCVS----GYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDD 286
Query: 378 TGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVN 437
+G YTC T K S L + PP F +H +L + FEC ++
Sbjct: 287 SGTYTCVVTYKNENISASAELTVLV-----PPWFLNHPSNLYAYE-SMDIEFECAVS--G 338
Query: 438 DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
P V W NG + + ++V + I V D G Y C A N
Sbjct: 339 KPVPTVNWMKNGDVVIPSDYFQIVGG-SNLR--ILGVVKSDEGFYQCVAEN 386
Score = 160 bits (405), Expect = 3e-42
Identities = 71/428 (16%), Positives = 124/428 (28%), Gaps = 79/428 (18%)
Query: 281 KATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQ-T 339
+ + S+ F + G D+
Sbjct: 2 RWGSELESSHHHHHHGGRRS-------LHFVSEPSDAV-TMRGGNVLLNC--SAESDRGV 51
Query: 340 MTVEFLYNGKPIEASHRIRTVHAFG----MVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
+++ +G + R + + D G+Y C A+ + IS
Sbjct: 52 PVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIIS 111
Query: 396 VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFH 454
+ + P +F S +S+ GD+ +C V DP + W N + +
Sbjct: 112 RTAKVMVAG---PLRFLSQTESIT-AFMGDTVLLKC---EVIGDPMPTIHWQKNQQDLNP 164
Query: 455 ---KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFI 500
+RV ++ I+ +Q DSG Y C A N I P
Sbjct: 165 IPGDSRVVVLPSGALQ---ISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQ 221
Query: 501 FHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 560
+ ++ PS N+ E +C P W S+ ++
Sbjct: 222 LYFLQRPS----NVIAIEGKDAVLECC--VSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS 275
Query: 561 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI------------------ 602
+L + V DSG Y C T K A++ V
Sbjct: 276 --NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFE 333
Query: 603 ----------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
V W NG + ++ + IL + + + G Y+C A N+ G+
Sbjct: 334 CAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGV---VKSDEGFYQCVAENEAGN 390
Query: 653 DVTKASLK 660
+ A L
Sbjct: 391 AQSSAQLI 398
Score = 149 bits (377), Expect = 1e-38
Identities = 88/493 (17%), Positives = 135/493 (27%), Gaps = 133/493 (26%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS----TAF 1317
F++E V E I
Sbjct: 19 RRSLHFVSEPSDAVTMRGGNVLLNCSAESD----------------RGVPVIKWKKDGLI 62
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
L + L ++ + D+G Y C A + IS
Sbjct: 63 LALGMDDRKQQLPNG--SLLIQNILHSRHHKPDEGLYQCEASLGDS----GSIISR---- 112
Query: 1378 TIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQL 1437
A + + P RF++Q T+
Sbjct: 113 ---------------TAKVMVAG-----------------------PLRFLSQ--TESIT 132
Query: 1438 VEM-QSTKFECQLAPVGDPNMKVEWFLNGKPL---PHKNRFNPIYDFGYVAMNFGWVYPE 1493
M + +C+ +GDP + W N + L P +R + G A+ + P
Sbjct: 133 AFMGDTVLLKCE--VIGDPMPTIHWQKNQQDLNPIPGDSRVV-VLPSG--ALQISRLQPG 187
Query: 1494 DSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQ 1552
DSG Y C A N A ++ PG+
Sbjct: 188 DSGVYRCSARNPASTRTGNEAEVRILSDPGLH---------------------------- 219
Query: 1553 LVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
F+ +P EG+ A V+GYP P WL I +
Sbjct: 220 --------RQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSL 271
Query: 1613 ATETT------EMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQAR 1658
+ + G + + A+ PP F A+E
Sbjct: 272 LGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIE 331
Query: 1659 FEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 1718
FE G P+PT+ W + + S FQI S L + V D G + +AEN
Sbjct: 332 FECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSN---LRILGVVKSDEGFYQCVAENEA 388
Query: 1719 GKAKCSANLVVEE 1731
G A+ SA L+V +
Sbjct: 389 GNAQSSAQLIVPK 401
Score = 143 bits (362), Expect = 1e-36
Identities = 77/425 (18%), Positives = 121/425 (28%), Gaps = 108/425 (25%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFG----LVTLSINSLRADDSAIYTCKATNLLGEAV 62
I+W K+G+ L+LG R + + + D +Y C+A+ ++
Sbjct: 50 GVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSI 109
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
+ T K+ V F+S +
Sbjct: 110 ISRTAKVM----------------------------------VAGPLRFLSQTESITAFM 135
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH---KNRVKMVSD 179
+ V C V DP + W N + + +RV ++
Sbjct: 136 GDTVLLKCEVIG-------------------DPMPTIHWQKNQQDLNPIPGDSRVVVLPS 176
Query: 180 FGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT-------HDFGYVALDIELML 232
I+ +Q DSG Y C N PA + + L
Sbjct: 177 GALQ---ISRLQPGDSGVYRC--SARN---PASTRTGNEAEVRILSDPGLHRQLYFLQRP 228
Query: 233 KTL------------------VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAED 274
+ P W + + +K + L I +D
Sbjct: 229 SNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQLRSKKYSLLGGS--NLLISNVTDDD 286
Query: 275 SGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIP 334
SG YT T + + S L L P F +L E FE +
Sbjct: 287 SGTYTCVVTYKNENISASAELTVLVP-------PWFLNHPSNLY-AYESMDIEFECA--V 336
Query: 335 VGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEI 394
G TV ++ NG + S + + L ILG D G Y C A N+ G A+
Sbjct: 337 SGKPVPTVNWMKNGDVVIPSDYFQ-IVGGSN--LRILGVVKSDEGFYQCVAENEAGNAQS 393
Query: 395 SVNLE 399
S L
Sbjct: 394 SAQLI 398
Score = 131 bits (332), Expect = 1e-32
Identities = 74/431 (17%), Positives = 117/431 (27%), Gaps = 124/431 (28%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
F+ PS + G V +C E I W +G A G +
Sbjct: 22 LHFVSE------PS--DAVTMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDRKQ 72
Query: 557 YDFG----FISLDMDYVYARDSGEYICRAT-NKWGTAMT-KAKVI--------------- 595
++ + D G Y C A+ G+ ++ AKV+
Sbjct: 73 QLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTESIT 132
Query: 596 ----------CKVL---TVIVEWFYNGKKL---PHGHRYRTFHDFGIVILDILYCYEENS 639
C+V+ + W N + L P R + I + +S
Sbjct: 133 AFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQ---PGDS 189
Query: 640 GVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETA 699
GVY C A N + A +R
Sbjct: 190 GVYRCSARNPASTRTGNE---------------------------------AEVRILSDP 216
Query: 700 DIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTF 759
+ + F SN+ EG++A E + P W + ++ S+ +
Sbjct: 217 GLH--RQLYFLQRPSNVI-AIEGKDAVLECC--VSGYPPPSFTWLRGEEVIQLRSKKYSL 271
Query: 760 CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGME 816
L IS V +D G Y+C SA + V + + M+
Sbjct: 272 LGGS--NLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMD 329
Query: 817 VFIS-------------------------FH-------EISPVYPEDCGQYSCRAYNDYG 844
+ F I V D G Y C A N+ G
Sbjct: 330 IEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAG 389
Query: 845 EAVTSASMKVQ 855
A +SA + V
Sbjct: 390 NAQSSAQLIVP 400
Score = 110 bits (276), Expect = 2e-25
Identities = 56/315 (17%), Positives = 83/315 (26%), Gaps = 80/315 (25%)
Query: 2 EPRADPNLKIEWFKNGVPLSL--GSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLG 59
E DP I W KN L+ G G L I+ L+ DS +Y C A N
Sbjct: 144 EVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSG--ALQISRLQPGDSGVYRCSARNPAS 201
Query: 60 EAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVE 119
EVR + F+ ++V
Sbjct: 202 TRTGNEA-----------------------------EVRILSDPGLHRQLYFLQRPSNVI 232
Query: 120 CKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 179
E ++ +C V G P W + I +++ +
Sbjct: 233 AIEGKDAVLECCVS---------G----------YPPPSFTWLRGEEVIQLRSKKYSLLG 273
Query: 180 FGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH-------DFGYVALDIELML 232
+ I+ V DSG Y C V + F ++
Sbjct: 274 GS--NLLISNVTDDDSGTYTCV--VTY---KNENISASAELTVLVPPWFLNHPSNLYAYE 326
Query: 233 KTLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVK 281
+ F W N + F+ L I+G D G Y
Sbjct: 327 SMDIEFECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGG-S--NLRILGVVKSDEGFYQCV 383
Query: 282 ATNSKGSATTSGTLK 296
A N G+A +S L
Sbjct: 384 AENEAGNAQSSAQLI 398
Score = 91.1 bits (226), Expect = 4e-19
Identities = 48/329 (14%), Positives = 82/329 (24%), Gaps = 99/329 (30%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKAS 658
++W +G L G R I + ++ + G+Y+C A+ +
Sbjct: 54 IKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSI---- 109
Query: 659 LKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDD 718
+ TA + F +I
Sbjct: 110 ------------------------------------ISRTAKVMVAGPLRFLSQTESIT- 132
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKT---GSRFRTFCDFGFVILEISPVYPE 775
G+ + DP + W N + + SR G L+IS + P
Sbjct: 133 AFMGDTVLLKCE--VIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPS-G--ALQISRLQPG 187
Query: 776 DCGQYSCRAYNDYGEAVT-SASMKVQGK---------------------RSIILE----- 808
D G Y C A N A +++ + +LE
Sbjct: 188 DSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSG 247
Query: 809 ------------SQLPKGMEVFISFH----EISPVYPEDCGQYSCRAYNDYGEAVTSASM 852
+ + + IS V +D G Y+C SA +
Sbjct: 248 YPPPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAEL 307
Query: 853 KVQGKRSIILESQLPKGMEGTIDKIAELE 881
V + P + E E
Sbjct: 308 TVLVPPWFL---NHPSNLYAYESMDIEFE 333
Score = 65.6 bits (160), Expect = 6e-11
Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P + W KNG + + L I + D Y C A N G A S+
Sbjct: 339 KPVPTVNWMKNGDVVIPSDYFQIVGG-S--NLRILGVVKSDEGFYQCVAENEAGNAQSSA 395
Query: 66 TLKIED 71
L +
Sbjct: 396 QLIVPK 401
Score = 56.4 bits (136), Expect = 5e-08
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG-- 1110
F S+ D G V +C E I W +G A G +
Sbjct: 21 SLHFVSEPSD-AVTMRGGNVLLNCSAES-DRGVPVIKWKKDGLILALGMDDRKQQLPNGS 78
Query: 1111 --FISLDMDYVYARDSGEYICRAT-NKWGTAMT-KAKVICKAKHDIVTESQ 1157
++ + D G Y C A+ G+ ++ AKV+ +++++
Sbjct: 79 LLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTE 129
Score = 38.3 bits (89), Expect = 0.020
Identities = 5/64 (7%), Positives = 9/64 (14%), Gaps = 19/64 (29%)
Query: 1819 NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRI 1878
+ + + + D G V L C
Sbjct: 5 SELESSHHHHHHGGR-------------------RSLHFVSEPSDAVTMRGGNVLLNCSA 45
Query: 1879 TGKP 1882
Sbjct: 46 ESDR 49
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo
sapiens} PDB: 3p40_A*
Length = 404
Score = 196 bits (500), Expect = 8e-55
Identities = 72/448 (16%), Positives = 126/448 (28%), Gaps = 93/448 (20%)
Query: 1422 KQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF 1480
QPP Q +D +V + EC+ G+P W N +
Sbjct: 14 TQPPTITKQ-SAKDHIVDPRDNILIECE--AKGNPAPSFHWTRNSRFFNIAKDPRVSMRR 70
Query: 1481 G----YVAMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKS 1535
+ G E GEY C A N +G + L+ + P
Sbjct: 71 RSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSP-------------- 116
Query: 1536 IEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRV 1594
+ VQEG P C G P P +
Sbjct: 117 ---------------------------LWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVI 149
Query: 1595 MWLINGHTIVNEIVR---------KITATE----------------TTEMEHKGKIQERV 1629
W+ + + + R + T ++ K +V
Sbjct: 150 FWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKV 209
Query: 1630 VDASEKPAKPPVFT---KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF 1686
+ + P F E G P P I W+++ + S
Sbjct: 210 LTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD--- 266
Query: 1687 QIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFL 1746
+ + L + V EDSG + +A N+ G + + ++ V+ P +L
Sbjct: 267 KAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVK----------AAPYWL 316
Query: 1747 TTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAV 1806
+ ++ G+ R + + V W+ NG+ + E T++ +
Sbjct: 317 DEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGD-TIIFRDTQ 375
Query: 1807 VEDSGAYECVAMNNAGEARCEAELVVQS 1834
+ Y+C N G A + V
Sbjct: 376 ISSRAVYQCNTSNEHGYLLANAFVSVLD 403
Score = 150 bits (379), Expect = 6e-39
Identities = 70/405 (17%), Positives = 125/405 (30%), Gaps = 73/405 (18%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGM 365
P + Q + + E G+ + + N + + R+ G
Sbjct: 17 PTITKQSAKDHIVDPRDNILIECE--AKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74
Query: 366 VVLEIL--GTKIEDTGVYTCRATNKWGQA---EISVNLECVDKSKGQPPKFTSHIKSLEG 420
+V++ G E G Y C A NK+G A I + + + P +
Sbjct: 75 LVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQV-------SKSPLWPKENLDPVV 127
Query: 421 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN-RVKMVSDFGFVVMDIAYVQSHDS 479
+++G +C P P + W + ++ RV + G + + V D
Sbjct: 128 VQEGAPLTLQCNP-PPGLPSPVIFWMSSSMEPITQDKRVSQGHN-G--DLYFSNVMLQDM 183
Query: 480 -GEYVCRAWNNF-------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFD 525
+Y C A +F + P + + V + +
Sbjct: 184 QTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 243
Query: 526 CRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKW 585
C PT I W+ G + ++ +L + V DSGEY C A+NK
Sbjct: 244 CIAS--GVPTPDIAWYKKGGDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKM 298
Query: 586 GTAMTKAKVI-------------------------CKVL---TVIVEWFYNGKKLPHG-- 615
G+ V C+ V+W NG+ L
Sbjct: 299 GSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPP 358
Query: 616 HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ R I+ D + VY+C +N++G + A +
Sbjct: 359 NPNREVAGDTIIFRDTQ---ISSRAVYQCNTSNEHGYLLANAFVS 400
Score = 147 bits (373), Expect = 4e-38
Identities = 83/452 (18%), Positives = 125/452 (27%), Gaps = 122/452 (26%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDF 464
QPP T + D+ EC +P W N + RV M
Sbjct: 15 QPPTITKQSAKDHIVDPRDNILIECEAK--GNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 72
Query: 465 GFVV--MDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRLPSPS 510
G +V GEY C A N P + P +
Sbjct: 73 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLW----------PKEN 122
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
D + V E + C P P+ I W + T + + G L V
Sbjct: 123 LDPVVVQEGAPLTLQCNP-PPGLPSPVIFWMSSSMEPITQDKRVSQGHNG--DLYFSNVM 179
Query: 571 ARDS-GEYICRATNKWG-TAMTKAKVICKVLTV--------------------------- 601
+D +Y C A + T K KVLT
Sbjct: 180 LQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD 239
Query: 602 -------------IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
+ W+ G LP + + I ++ EE+SG Y C A+N
Sbjct: 240 LLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVS---EEDSGEYFCLASN 296
Query: 649 KYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPV 708
K GS S++ + AP
Sbjct: 297 KMGSIRHTISVR-------VKA-----------------------------------APY 314
Query: 709 FTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILE 768
+ N+ L GE+ R +PK V+W NG+P+++ G +
Sbjct: 315 WLDEPKNL-ILAPGEDGRLVCR--ANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDT-II 370
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
Y C N++G + +A + V
Sbjct: 371 FRDTQISSRAVYQCNTSNEHGYLLANAFVSVL 402
Score = 144 bits (365), Expect = 5e-37
Identities = 63/355 (17%), Positives = 102/355 (28%), Gaps = 58/355 (16%)
Query: 1560 KEAPVFVSQP-EAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKIT----- 1612
+ P Q + V + C G P P W N +++
Sbjct: 14 TQPPTITKQSAKDHIVDPRDNILIEC-EAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRS 72
Query: 1613 -------ATETTEMEHK-----------GKIQERVVDASEKPAKPPVFTKK-IQPCRAFE 1653
+ E++ G + +K P++ K+ + P E
Sbjct: 73 GTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNR--IRLQVSKSPLWPKENLDPVVVQE 130
Query: 1654 QDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS-GVFA 1711
+ G P P I W + D ++ L V ++D ++
Sbjct: 131 GAPLTLQCNPPPGLPSPVIFWMSSSMEPITQ-DKRVSQGHNGD-LYFSNVMLQDMQTDYS 188
Query: 1712 VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFL---TTISSAVINVGQLARFDAKISA 1768
A N + PSF+ T SS ++ G + S
Sbjct: 189 CNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASG 248
Query: 1769 TKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEA 1828
D+ W K G + D + K + L I EDSG Y C+A N G R
Sbjct: 249 VPTPDIAWYKKGGDLPSD-KAKFENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTI 305
Query: 1829 ELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ V+ AP + K+ + G L CR G P+
Sbjct: 306 SVRVK-------------------AAPYWLDEPKNLILAPGEDGRLVCRANGNPK 341
Score = 136 bits (344), Expect = 3e-34
Identities = 72/493 (14%), Positives = 120/493 (24%), Gaps = 147/493 (29%)
Query: 698 TADIEHRQAPVFTV-PLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS-- 754
+ E Q P T + + +N E P W N +
Sbjct: 8 SIQNELTQPPTITKQSAKDHI-VDPRDNILIECEAKGN--PAPSFHWTRNSRFFNIAKDP 64
Query: 755 RFRTFCDFGFVILE--ISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQL 811
R G ++++ E G+Y C A N +G A++ ++V E+
Sbjct: 65 RVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLD 124
Query: 812 PK----------------------------GMEV------FISFHE----ISPVYPED-C 832
P ME H S V +D
Sbjct: 125 PVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 184
Query: 833 GQYSCRAYNDYG-EAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRT 891
YSC A + ++ + + + P
Sbjct: 185 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPS----------------------- 221
Query: 892 IDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVE 951
T + + EC + P+ +
Sbjct: 222 ------------------------FMYPQGTASSQMVLRGMDLLLECI--ASGVPTPDIA 255
Query: 952 WFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
W+ G L + + K N L I +V DSG Y C A+NK G + + VK
Sbjct: 256 WYKKGGDLPSD-KAKFENFNK--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA- 311
Query: 1012 QGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGK 1071
P + + ++ L +
Sbjct: 312 -----------------------------------------APYWLDEPKN-LILAPGED 329
Query: 1072 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 1131
CR +P + W NG P + G ++ Y C
Sbjct: 330 GRLVCRAN--GNPKPTVQWMVNGEPLQSAPPNPNREVAG-DTIIFRDTQISSRAVYQCNT 386
Query: 1132 TNKWGTAMTKAKV 1144
+N+ G + A V
Sbjct: 387 SNEHGYLLANAFV 399
Score = 136 bits (343), Expect = 4e-34
Identities = 63/388 (16%), Positives = 116/388 (29%), Gaps = 54/388 (13%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFG----YVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
P W N++ + + + G E G Y A N G+A ++
Sbjct: 47 PSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSN 106
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE 352
RL V PL+ + + EG + + P G + + ++ +
Sbjct: 107 RI-----RLQV-SKSPLWPKENLDPVVVQEGAPLTLQCN-PPPGLPSPVIFWMSSSMEPI 159
Query: 353 ASHRIRTVHAFGMVVLEILGTKIEDT-GVYTCRATNKWGQ-----AEISVNLECVDKSKG 406
+ + G L ++D Y+C A + ++ +
Sbjct: 160 TQDKRVSQGHNG--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAE 217
Query: 407 QPPKFTSHIKSLEGL--KDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
+ P F + G EC + P + W+ G + ++ K +
Sbjct: 218 RTPSFMYPQGTASSQMVLRGMDLLLECIAS--GVPTPDIAWYKKGGDLP-SDKAKFENFN 274
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNL 514
+ I V DSGEY C A N + P+ ++ P NL
Sbjct: 275 K--ALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY--WLDE----PK----NL 322
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS 574
+ CR +P + W NG P + G ++
Sbjct: 323 ILAPGEDGRLVCRAN--GNPKPTVQWMVNGEPLQSAPPNPNREVAG-DTIIFRDTQISSR 379
Query: 575 GEYICRATNKWGTAMTKAKVICKVLTVI 602
Y C +N+ G + A ++V+
Sbjct: 380 AVYQCNTSNEHGYLLANAF-----VSVL 402
Score = 131 bits (330), Expect = 2e-32
Identities = 76/435 (17%), Positives = 133/435 (30%), Gaps = 105/435 (24%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSIN----SLRADDSAIYTCKATNL 57
E + +P W +N ++ R + TL I+ + Y C A N
Sbjct: 40 EAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNK 99
Query: 58 LGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLND 117
G A+S L+ PL +L+
Sbjct: 100 FGTALSN------------RIRLQVSKSPLWPK----------------------ENLDP 125
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN-RVKM 176
V +E + C P P + W + ++ RV
Sbjct: 126 VVVQEGAPLTLQCNPPPG------------------LPSPVIFWMSSSMEPITQDKRVSQ 167
Query: 177 VSDFGFVVMDIAYVQSHDS-GEYVC----------------QWFVNNKPLPAGAKFKTTH 219
+ G + + V D +Y C V A +
Sbjct: 168 GHN-G--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMY 224
Query: 220 DFG-----YVALDIELMLK-----TLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
G V ++L+L+ P W+ LP+ K + AL I
Sbjct: 225 PQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSD---KAKFENFNKALRITN 281
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF- 328
EDSG Y A+N GS + +++ P + + ++L L+ GE
Sbjct: 282 VSEEDSGEYFCLASNKMGSIRHTISVRVKAA-------PYWLDEPKNLI-LAPGEDGRLV 333
Query: 329 -EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATN 387
A+ G+ TV+++ NG+P++++ G + T+I VY C +N
Sbjct: 334 CRAN----GNPKPTVQWMVNGEPLQSAPPNPNREVAGDT-IIFRDTQISSRAVYQCNTSN 388
Query: 388 KWGQAEISVNLECVD 402
+ G + + +D
Sbjct: 389 EHGYLLANAFVSVLD 403
Score = 131 bits (330), Expect = 2e-32
Identities = 63/502 (12%), Positives = 126/502 (25%), Gaps = 146/502 (29%)
Query: 1263 EPPRFITE-IESVTVQEAEPVRFE-----------------TRVEPRVDPRLRVECSLST 1304
+PP + + V + + E DPR+ + T
Sbjct: 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGT 74
Query: 1305 AFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
L+ + E +GEY C A N G
Sbjct: 75 -------------LVID-------------------FRSGGRPEEYEGEYQCFARNKFGT 102
Query: 1365 AFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQP 1424
A + +Q+
Sbjct: 103 ALSN------------------------RIRLQVSK-----------------------S 115
Query: 1425 PRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVA 1484
P + + + E +C P G P+ + W + +++ G
Sbjct: 116 PLWPKENLDPVVVQEGAPLTLQCN-PPPGLPSPVIFWMSSSMEPITQDKRVSQGHNG--D 172
Query: 1485 MNFGWVYPEDS-GEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREME 1543
+ F V +D +Y C A + ++
Sbjct: 173 LYFSNVMLQDMQTDYSCNARFHFTHTIQ----------------------------QKNP 204
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHT 1602
+ + + V + P +Q V G C +G P P + W G
Sbjct: 205 FTLKVLTTRGVAERTPS-FMYPQGTASSQMVLRGMDLLLEC-IASGVPTPDIAWYKKGGD 262
Query: 1603 IVNEIVRKITATET-----TEMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPC 1649
+ ++ + + E G+ + + + P + + +
Sbjct: 263 LPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNL 322
Query: 1650 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 1709
+ R +G+P PT++W P+ S+P + +I+ R + V
Sbjct: 323 ILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIF-RDTQISSRAV 381
Query: 1710 FAVIAENRGGKAKCSANLVVEE 1731
+ N G +A + V +
Sbjct: 382 YQCNTSNEHGYLLANAFVSVLD 403
Score = 130 bits (329), Expect = 2e-32
Identities = 74/417 (17%), Positives = 115/417 (27%), Gaps = 74/417 (17%)
Query: 105 VFDSPVFISH-LNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
+ P D +N+ +C + G +P W
Sbjct: 13 LTQPPTITKQSAKDHIVDPRDNILIECEAK---------G----------NPAPSFHWTR 53
Query: 164 NGKPI--FHKNRVKMVSDFGFVV--MDIAYVQSHDSGEYVCQWFVNNKPLPAGAKF--KT 217
N + RV M G +V GEY C F N G +
Sbjct: 54 NSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQC--FARN---KFGTALSNRI 108
Query: 218 THDFGYVALDIELMLKTLV-------------------PFTEWFVNNKPL-PAGAKFKTT 257
L + L +V P W ++ +
Sbjct: 109 RLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQG 168
Query: 258 HDFGYVALDIVGAYAEDS-GIYTVKATNSKGSATTSG---TLKCLERLFVNHNYPLFSLQ 313
H+ G L +D Y+ A TLK L V P F
Sbjct: 169 HN-G--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYP 225
Query: 314 FQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEIL 371
S+ G E I G T + + G + + + + + L I
Sbjct: 226 QGTASSQMVLRGMDLLLEC--IASGVPTPDIAWYKKGGDLPSD-KAKFENFNK--ALRIT 280
Query: 372 GTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
ED+G Y C A+NK G ++++ V P + K+L L G+ C
Sbjct: 281 NVSEEDSGEYFCLASNKMGSIRHTISVR-VK----AAPYWLDEPKNLI-LAPGEDGRLVC 334
Query: 432 TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+P+ V+W NG+P+ G ++ Q Y C N
Sbjct: 335 RAN--GNPKPTVQWMVNGEPLQSAPPNPNREVAGDTII-FRDTQISSRAVYQCNTSN 388
Score = 128 bits (322), Expect = 2e-31
Identities = 68/434 (15%), Positives = 117/434 (26%), Gaps = 123/434 (28%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF--ATGSRVK 554
P ++D V + +C E K +P W N R F A RV
Sbjct: 17 PTITKQ------SAKD-HIVDPRDNILIEC--EAKGNPAPSFHWTRNSRFFNIAKDPRVS 67
Query: 555 TVYDFG--FISLDMDYVYARDSGEYICRATNKWGTAMT-KAKVI---------------- 595
G I GEY C A NK+GTA++ + ++
Sbjct: 68 MRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVV 127
Query: 596 ----------CKVL----TVIVEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSG 640
C + ++ W + + R H+ + +++ ++
Sbjct: 128 VQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVML--QDMQT 185
Query: 641 VYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETAD 700
Y C A + + K L + T
Sbjct: 186 DYSCNARFHFTHTI-------QQKNPFTL-------------------------KVLTTR 213
Query: 701 IEHRQAPVFTVPLSNIDDL--REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT 758
+ P F P G + E + P + W+ G + +
Sbjct: 214 GVAERTPSFMYPQGTASSQMVLRGMDLLLECI--ASGVPTPDIAWYKKGGDLPSDKA--K 269
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGM 815
F +F L I+ V ED G+Y C A N G + S++V+ + E + L G
Sbjct: 270 FENFN-KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGE 328
Query: 816 EVFIS-------------FHE---------------------ISPVYPEDCGQYSCRAYN 841
+ + Y C N
Sbjct: 329 DGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSN 388
Query: 842 DYGEAVTSASMKVQ 855
++G + +A + V
Sbjct: 389 EHGYLLANAFVSVL 402
Score = 86.5 bits (214), Expect = 1e-17
Identities = 42/259 (16%), Positives = 71/259 (27%), Gaps = 55/259 (21%)
Query: 909 IEEDLGKAPEFLTTP-TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRI 965
I+ +L + P D + EC +P+ + W N + + R+
Sbjct: 9 IQNELTQPPTITKQSAKDHIVDPRDNILIECE--AKGNPAPSFHWTRNSRFFNIAKDPRV 66
Query: 966 KTINDFGFVILEINDVYLR--DSGLYTCKATNKHGEATT-SCKLTVKGRQGIDVEPQVSA 1022
G ++++ G Y C A NK G A + +L V
Sbjct: 67 SMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK------------ 114
Query: 1023 IFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKS 1082
P++ + D + V E + C P
Sbjct: 115 ------------------------------SPLWPKENLDPVVVQEGAPLTLQCNP-PPG 143
Query: 1083 DPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS-GEYICRATNKWG-TAMT 1140
P+ I W + T + + G L V +D +Y C A + T
Sbjct: 144 LPSPVIFWMSSSMEPITQDKRVSQGHNG--DLYFSNVMLQDMQTDYSCNARFHFTHTIQQ 201
Query: 1141 KAKVICKAKHDIVTESQLP 1159
K K + P
Sbjct: 202 KNPFTLKVLTTRGVAERTP 220
Score = 84.5 bits (209), Expect = 5e-17
Identities = 56/329 (17%), Positives = 94/329 (28%), Gaps = 100/329 (30%)
Query: 603 VEWFYNGKKLP--HGHRYRTFHDFGIVILDIL--YCYEENSGVYECRATNKYGSDVTKAS 658
W N + R G +++D EE G Y+C A NK+G+ ++
Sbjct: 49 FHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNR- 107
Query: 659 LKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDD 718
L+ +++ V
Sbjct: 108 --------------------------------IRLQVSKSPLWPKENLDPVVV------- 128
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPED-C 777
+EG + P P + W + T + + G L S V +D
Sbjct: 129 -QEGAPLTLQCNP-PPGLPSPVIFWMSSSMEPITQDKRVSQGHNG--DLYFSNVMLQDMQ 184
Query: 778 GQYSCRAYNDYGEAV----------------------------TSASMKVQGKRSIILE- 808
YSC A + + T++S V ++LE
Sbjct: 185 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLEC 244
Query: 809 ----------------SQLPKGMEVFISFH---EISPVYPEDCGQYSCRAYNDYGEAVTS 849
LP F +F+ I+ V ED G+Y C A N G +
Sbjct: 245 IASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHT 304
Query: 850 ASMKVQGKRSIILESQ---LPKGMEGTID 875
S++V+ + E + L G +G +
Sbjct: 305 ISVRVKAAPYWLDEPKNLILAPGEDGRLV 333
Score = 81.8 bits (202), Expect = 4e-16
Identities = 41/232 (17%), Positives = 67/232 (28%), Gaps = 40/232 (17%)
Query: 916 APEFLTTPTD-LTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
+P + D + + E +C P PS + W + + + G
Sbjct: 115 SPLWPKENLDPVVVQEGAPLTLQCNP-PPGLPSPVIFWMSSSMEPITQDKRVSQGHNG-- 171
Query: 975 ILEINDVYLRDS-GLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L ++V L+D Y+C A QK
Sbjct: 172 DLYFSNVMLQDMQTDYSCNARFHFTHTIQ-----------------------------QK 202
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 1093
L E P ++ + V + +C PT I W+
Sbjct: 203 NPFTLKVLTTRGVAERTP-SFMYPQGTASSQMVLRGMDLLLECIAS--GVPTPDIAWYKK 259
Query: 1094 GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
G + ++ +L + V DSGEY C A+NK G+ V
Sbjct: 260 GGDLPSDKAKFENFN---KALRITNVSEEDSGEYFCLASNKMGSIRHTISVR 308
Score = 49.5 bits (118), Expect = 8e-06
Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 30/116 (25%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPR---LRVECSLSTAFFFPFINISTA 1316
+ P ++ E +++ + E R R P+ P + L +A P ++
Sbjct: 310 KAAPYWLDEPKNLILAPGEDGRLVCRANGNPK--PTVQWMVNGEPLQSAPPNPNREVAGD 367
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
++ + Y C N+HG A +S
Sbjct: 368 -----------------------TIIFRDTQISSRAVYQCNTSNEHGYLLANAFVS 400
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A
{Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
b.1.1.4
Length = 395
Score = 192 bits (490), Expect = 1e-53
Identities = 74/452 (16%), Positives = 122/452 (26%), Gaps = 102/452 (22%)
Query: 1422 KQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPN-MKVEWFLNGKPLPHKNRFNPIYD 1479
+ P Q + L E T EC + G+ +K W +GK + N
Sbjct: 4 DKYPVLKDQP--AEVLFRENNPTVLECIIE--GNDQGVKYSWKKDGKSYNWQEH-NAALR 58
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
++ F D G Y C A G+ +R I
Sbjct: 59 KDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYL------------------ 100
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLI 1598
++ + EG P + C YP+P + W
Sbjct: 101 -----------------------IASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKK 137
Query: 1599 NGHTIVNEIVRK---------------ITATETTEMEHKGK------------------- 1624
T ++ K
Sbjct: 138 RLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEY 197
Query: 1625 IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP 1684
+ V + PV + A D + +P+ +F+ + +P
Sbjct: 198 EIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNP 257
Query: 1685 DFQI--HTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA-KCSANLVVEEKRQGGRGGVV 1741
+ +I H ++ L+ + ED GV+ +N GK K S L V
Sbjct: 258 EDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS---------- 307
Query: 1742 PPSFLTTISSAV-INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
P + + + GQ K++ +V W N K + R + L
Sbjct: 308 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNA-KPLSGGRATVTDS----GL 362
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
+I D G Y C A N G+ E + V
Sbjct: 363 VIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394
Score = 153 bits (388), Expect = 3e-40
Identities = 59/357 (16%), Positives = 103/357 (28%), Gaps = 55/357 (15%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTI-VNEIVRKITATET 1616
+ PV QP +E P C + G + + W +G + E + E
Sbjct: 4 DKYPVLKDQPAEVLFRENNPTVLEC-IIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEG 62
Query: 1617 T------EMEHKGK-----------IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARF 1659
+ + +G RV S + K E +
Sbjct: 63 SLVFLRPQASDEGHYQCFAETPAGVASSRV--ISFRKTYLIASPAKTHEKTPIEGRPFQL 120
Query: 1660 EVEF-DGDPLPTIKWFREDFPITSSPDFQ-----IHTFSTKS--ILIMRQVFMEDSGVFA 1711
+ + P P I W + + D I + I+ + + D +
Sbjct: 121 DCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYV 180
Query: 1712 VIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK 1770
A+N + ++ + G P + G + +
Sbjct: 181 CTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNP 240
Query: 1771 PLDVYWLKNGKKIIPDIRYKTLEEDNLF--TLLIIEAVVEDSGAYECVAMNNAGEA-RCE 1827
+ KNGK + + + + LL + ED G Y C N G+ +
Sbjct: 241 MGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHS 300
Query: 1828 AELVVQSKKAPGKQAPAPGAAVAQDEAPT-VAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+L V AP +P K VK+G VT+ C++TG P
Sbjct: 301 LKLTVV-------------------SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPA 338
Score = 149 bits (378), Expect = 7e-39
Identities = 70/405 (17%), Positives = 106/405 (26%), Gaps = 70/405 (17%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P+ Q + E E Q + + +GK +
Sbjct: 7 PVLKDQPAEVL-FRENNPTVLECIIEGND---QGVKYSWKKDGKSYNWQEHNAALR-KDE 61
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L L + D G Y C A G A V + K + ++ G
Sbjct: 62 GSLVFLRPQASDEGHYQCFAETPAGVASSRV----ISFRKTYLIASPAKTHEKTPIE-GR 116
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKN-------RVKMVSDFGFVVMDIAYVQSHD 478
+C L P P+ + W R+ D + D
Sbjct: 117 PFQLDCVL-PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSD 175
Query: 479 SGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCR 527
+YVC A N I + +P ++ C
Sbjct: 176 IYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMIYCM 235
Query: 528 LEPKSDPTMRIDWFFNGRPFATGS--RVKTVYDFGFISLDMDYVYARDSGEYICRATNKW 585
S+P ++F NG+ R+ L D G Y C N
Sbjct: 236 YG--SNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGV 293
Query: 586 GTAMTK---------------------------AKVICKVL---TVIVEWFYNGKKLPHG 615
G + CKV V W +N K L G
Sbjct: 294 GKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG 353
Query: 616 HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
T D G+VI + + G Y CRATN++G + ++
Sbjct: 354 R--ATVTDSGLVIKGV---KNGDKGYYGCRATNEHGDKYFETLVQ 393
Score = 148 bits (375), Expect = 2e-38
Identities = 75/491 (15%), Positives = 117/491 (23%), Gaps = 154/491 (31%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+ PV + + RE E + D +K W +GK
Sbjct: 5 KYPVLKDQPAEVL-FRENNPTVLECIIEGNDQG-VKYSWKKDGKSYNWQEHNAAL-RKDE 61
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ------------- 810
L D G Y C A G A + S + + ++
Sbjct: 62 GSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGRPFQLD 121
Query: 811 ------LPK--------GMEVFIS-------------------FHEISPVYPEDCGQYSC 837
PK + F ++ D +Y C
Sbjct: 122 CVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVC 181
Query: 838 RAYNDYGEA-VTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIA 896
A N + V +++G +
Sbjct: 182 TAKNAAVDEEVVLVEYEIKGVTKDNSGYKGE----------------------------- 212
Query: 897 ELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNG 956
P D+ + C ++P +F NG
Sbjct: 213 --------------------PVPQYVSKDMMAKAGDVTMIYCM--YGSNPMGYPNYFKNG 250
Query: 957 KALSAGS--RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATT-SCKLTVKGRQG 1013
K ++ RI N L D G+YTC+ N G+ S KLTV
Sbjct: 251 KDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVS--- 307
Query: 1014 IDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVH 1073
P + + + + V + V
Sbjct: 308 ---------------------------------------APKYEQKPEKVIVVKQGQDVT 328
Query: 1074 FDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN 1133
C + P + W N +P +G R L + V D G Y CRATN
Sbjct: 329 IPC--KVTGLPAPNVVWSHNAKPL-SGGRATVTDS----GLVIKGVKNGDKGYYGCRATN 381
Query: 1134 KWGTAMTKAKV 1144
+ G + V
Sbjct: 382 EHGDKYFETLV 392
Score = 144 bits (365), Expect = 4e-37
Identities = 73/454 (16%), Positives = 114/454 (25%), Gaps = 125/454 (27%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI-FHKNRVKMVSDFG 465
+ P + ++ + EC + ND +K W +GK + ++ + D G
Sbjct: 5 KYPVLKDQPAEVL-FRENNPTVLECIIEG-NDQGVKYSWKKDGKSYNWQEHNAALRKDEG 62
Query: 466 FVVMDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRLPSPSQDN 513
+V Q+ D G Y C A ++ P
Sbjct: 63 SLV--FLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPA-----------KTHE 109
Query: 514 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-------FATGSRVKTVYDFGFISLDM 566
E DC L P + P I W R+ D +
Sbjct: 110 KTPIEGRPFQLDCVL-PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIV 168
Query: 567 DYVYARDSGEYICRATNKWGTAMTKAKVI------------------------------- 595
D +Y+C A N
Sbjct: 169 TKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGD 228
Query: 596 -----CKVL---TVIVEWFYNGKKLPHGHRYRT--FHDFGIVILDILYCYEENSGVYECR 645
C +F NGK + R + L E+ GVY C
Sbjct: 229 VTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE 288
Query: 646 ATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQ 705
N G + L
Sbjct: 289 VDNGVGKPQKH---------------------------------SLKLTVVS-------- 307
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
AP + + +++G++ + T P V W N KP+ +G R
Sbjct: 308 APKYEQKPEKVIVVKQGQDVTIPCK--VTGLPAPNVVWSHNAKPL-SGGRATVTDS---- 360
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
L I V D G Y CRA N++G+ ++V
Sbjct: 361 GLVIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 394
Score = 141 bits (358), Expect = 3e-36
Identities = 66/432 (15%), Positives = 113/432 (26%), Gaps = 116/432 (26%)
Query: 9 LKIEWFKNGVPLSLGSR-IRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTL 67
+K W K+G + D G +L +A D Y C A G A S
Sbjct: 37 VKYSWKKDGKSYNWQEHNAALRKDEG--SLVFLRPQASDEGHYQCFAETPAGVASS---- 90
Query: 68 KIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVH 127
+ RK + ++ E
Sbjct: 91 -------------------------RVISFRKTYL------IASPAKTHEKTPIEGRPFQ 119
Query: 128 FDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN-------RVKMVSDF 180
DC + + P+ + W R+ D
Sbjct: 120 LDCVLPNA------------------YPKPLITWKKRLSGADPNADVTDFDRRITAGPDG 161
Query: 181 GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT-----------HDFGYVALDIE 229
+ D +YVC N A + + +
Sbjct: 162 NLYFTIVTKEDVSDIYKYVC--TAKN---AAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQ 216
Query: 230 LMLKTL------------------VPFTEWFVNNKPLPAGAKFKTT--HDFGYVALDIVG 269
+ K + + + +F N K + + + T + L
Sbjct: 217 YVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKT 276
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF- 328
ED G+YT + N G +L V + P + + + + + +G+
Sbjct: 277 TLPEDEGVYTCEVDNGVGKPQKHSL-----KLTV-VSAPKYEQKPEKVIVVKQGQDVTIP 330
Query: 329 -EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATN 387
+ + G V + +N KP+ T L I G K D G Y CRATN
Sbjct: 331 CKVT----GLPAPNVVWSHNAKPLSGGRATVTDS-----GLVIKGVKNGDKGYYGCRATN 381
Query: 388 KWGQAEISVNLE 399
+ G ++
Sbjct: 382 EHGDKYFETLVQ 393
Score = 140 bits (353), Expect = 1e-35
Identities = 63/502 (12%), Positives = 113/502 (22%), Gaps = 145/502 (28%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS-----TA 1316
++ P + V +E P E +E + S +
Sbjct: 4 DKYPVLKDQPAEVLFRENNPTVLECIIEGNDQG----------------VKYSWKKDGKS 47
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKI 1376
+ + SL D+G Y C A G A ++
Sbjct: 48 YNWQE--------HNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSR-------- 91
Query: 1377 PTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQ 1436
I + + T ++
Sbjct: 92 -VISFRKTYL--------------------------------------IASPAK--THEK 110
Query: 1437 LVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVY---- 1491
+ + +C P P + W +D A G +Y
Sbjct: 111 TPIEGRPFQLDCV-LPNAYPKPLITWKKRLSGADPNADVTD-FDRRITAGPDGNLYFTIV 168
Query: 1492 ----PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQ 1547
D +Y+C A N +E +
Sbjct: 169 TKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTK------------------------ 204
Query: 1548 HTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEI 1607
++ K PV + + G+ P + NG +
Sbjct: 205 -------DNSGYKGEPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNP 257
Query: 1608 VRKITATETT----------EMEHKGK----IQERVVDASEKPAK-----PPVFTKKIQP 1648
+IT T E +G + V + K P + +K +
Sbjct: 258 EDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEK 317
Query: 1649 C-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS 1707
+ + G P P + W P+ S + S L+++ V D
Sbjct: 318 VIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL-SGGRATVTD----SGLVIKGVKNGDK 372
Query: 1708 GVFAVIAENRGGKAKCSANLVV 1729
G + A N G + V
Sbjct: 373 GYYGCRATNEHGDKYFETLVQV 394
Score = 139 bits (352), Expect = 2e-35
Identities = 77/421 (18%), Positives = 124/421 (29%), Gaps = 79/421 (18%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
V PV +V +EN +C +E ND +K W +
Sbjct: 3 VDKYPVLKDQPAEVLFRENNPTVLECIIEG------------------NDQGVKYSWKKD 44
Query: 165 GKPI-FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAG-AKFKTTHDFG 222
GK + ++ + D G +V Q+ D G Y C F PAG A +
Sbjct: 45 GKSYNWQEHNAALRKDEGSLV--FLRPQASDEGHYQC--FAET---PAGVASSRVISFRK 97
Query: 223 YVALDIELMLKTLV-------------------PFTEWFVNNKPLPAGA-------KFKT 256
+ P W A +
Sbjct: 98 TYLIASPAKTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITA 157
Query: 257 THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQH 316
D + D Y A N+ ++ + +++ Q+
Sbjct: 158 GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY 217
Query: 317 LSN---LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGMVVLEIL 371
+S G++ + + + NGK + + RI + L
Sbjct: 218 VSKDMMAKAGDVTMIYC--MYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFK 275
Query: 372 GTKIEDTGVYTCRATNKWGQAE---ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAH 428
T ED GVYTC N G+ + + + + PK+ + + +K G
Sbjct: 276 TTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV-------SAPKYEQKPEKVIVVKQGQDVT 328
Query: 429 FECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
C V P V W HN KP+ R + + I V++ D G Y CRA
Sbjct: 329 IPC---KVTGLPAPNVVWSHNAKPL-SGGRATVTDS----GLVIKGVKNGDKGYYGCRAT 380
Query: 488 N 488
N
Sbjct: 381 N 381
Score = 138 bits (348), Expect = 6e-35
Identities = 61/381 (16%), Positives = 100/381 (26%), Gaps = 54/381 (14%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W + K +L + A D G Y A G A++
Sbjct: 40 SWKKDGKSYNWQEHNAALRKDEG-SLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKT 98
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI-------E 352
L + + EG + +P + + +
Sbjct: 99 YL------IASPAKTHEKT-PIEGRPFQLDCV-LPNAYPKPLITWKKRLSGADPNADVTD 150
Query: 353 ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKSKGQ 407
RI + + + D Y C A N E + D S +
Sbjct: 151 FDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYK 210
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPI--FHKNRVKMVSDF 464
++ K GD C +P +F NGK + ++R+ +
Sbjct: 211 GEPVPQYVSKDMMAKAGDVTMIYC---MYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRT 267
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNN-----------FIFIPPFPIFIFHQIRLPSPSQDN 513
+ D G Y C N + P + +
Sbjct: 268 SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPK--YE-------QKPEKV 318
Query: 514 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARD 573
+ V + V C + P + W N +P +G R L + V D
Sbjct: 319 IVVKQGQDVTIPC--KVTGLPAPNVVWSHNAKPL-SGGRATVTDS----GLVIKGVKNGD 371
Query: 574 SGEYICRATNKWGTAMTKAKV 594
G Y CRATN+ G + V
Sbjct: 372 KGYYGCRATNEHGDKYFETLV 392
Score = 136 bits (344), Expect = 2e-34
Identities = 60/432 (13%), Positives = 104/432 (24%), Gaps = 118/432 (27%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P+ P+ + E +C +E + W +G+ +
Sbjct: 7 PVLKDQ------PA--EVLFRENNPTVLECIIEGNDQGV-KYSWKKDGKSYNWQEHNA-A 56
Query: 557 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK------------------------- 591
SL A D G Y C A G A ++
Sbjct: 57 LRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFRKTYLIASPAKTHEKTPIEGR 116
Query: 592 -AKVICKVLT----VIVEWFYNGKKLPH-------GHRYRTFHDFGIVILDILYCYEENS 639
++ C + ++ W R D + + +
Sbjct: 117 PFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDI 176
Query: 640 GVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETA 699
Y C A N + ++
Sbjct: 177 YKYVCTAKNAAVDEEVVLVE-------------------------------YEIKGVTKD 205
Query: 700 DIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT- 758
+ ++ PV ++ + G+ +P +F NGK + R
Sbjct: 206 NSGYKGEPVPQYVSKDM-MAKAGDVTMIYCM--YGSNPMGYPNYFKNGKDVNGNPEDRIT 262
Query: 759 -FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILE----SQLP 812
L PED G Y+C N G+ S + V + +
Sbjct: 263 RHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVK 322
Query: 813 KGMEVFIS-------------FHE-----------------ISPVYPEDCGQYSCRAYND 842
+G +V I H I V D G Y CRA N+
Sbjct: 323 QGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNE 382
Query: 843 YGEAVTSASMKV 854
+G+ ++V
Sbjct: 383 HGDKYFETLVQV 394
Score = 114 bits (286), Expect = 8e-27
Identities = 69/483 (14%), Positives = 128/483 (26%), Gaps = 114/483 (23%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PV Q + + E +C +E + W +G+ +
Sbjct: 6 YPVLKDQPAE-VLFRENNPTVLECIIEGNDQGV-KYSWKKDGKSYNWQEHNA-ALRKDEG 62
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELEK 1172
SL A D G Y C A G A ++ ++ L S +
Sbjct: 63 SLVFLRPQASDEGHYQCFAETPAGVASSRVIS--------FRKTYLIASPAKTH------ 108
Query: 1173 NYTPEEIEEDE-------IPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEK 1225
+ E +P P+ + K+ + + ++ A L
Sbjct: 109 ---EKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYF 165
Query: 1226 HDIVTESQLPD---------SMSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTV 1276
VT+ + D + + ++ L + +++ + P + +
Sbjct: 166 TI-VTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMA 224
Query: 1277 QEAEPVRFETRVE--PRVDPR-LRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPI 1333
+ + P P + ++ P I+ L
Sbjct: 225 KAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGN---PEDRITRHNRTSGKRLL-------- 273
Query: 1334 FDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTE 1393
PED+G Y C N G+ +++L
Sbjct: 274 ---------FKTTLPEDEGVYTCEVDNGVGKPQKH---------SLKLTVVS-------- 307
Query: 1394 ALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVG 1453
P++ + + + + Q C++ G
Sbjct: 308 ------------------------------APKYEQKPEKVIVVKQGQDVTIPCKVT--G 335
Query: 1454 DPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRA 1513
P V W N KPL + D G V V D G Y CRATN +G
Sbjct: 336 LPAPNVVWSHNAKPLSGGRAT--VTDSGLVIKG---VKNGDKGYYGCRATNEHGDKYFET 390
Query: 1514 ILK 1516
+++
Sbjct: 391 LVQ 393
Score = 102 bits (255), Expect = 7e-23
Identities = 53/320 (16%), Positives = 78/320 (24%), Gaps = 77/320 (24%)
Query: 3 PRADPNLKIEWFKNGVPL-------SLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKAT 55
P A P I W K RI + D L + D Y C A
Sbjct: 125 PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAK 184
Query: 56 NLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL 115
N + E + + PV
Sbjct: 185 NAAVDEEVVLV-------------------------EYEIKGVTKDNSGYKGEPVPQYVS 219
Query: 116 NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNR 173
D+ K + C +P +F NGK + ++R
Sbjct: 220 KDMMAKAGDVTMIYCMYG---------S----------NPMGYPNYFKNGKDVNGNPEDR 260
Query: 174 VKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAK------------FKTTHDF 221
+ + + D G Y C+ V+N +
Sbjct: 261 ITRHNRTSGKRLLFKTTLPEDEGVYTCE--VDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318
Query: 222 GYVALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSG 276
V ++ + V P W N KPL G + T L I G D G
Sbjct: 319 IVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG-RATVTDS----GLVIKGVKNGDKG 373
Query: 277 IYTVKATNSKGSATTSGTLK 296
Y +ATN G ++
Sbjct: 374 YYGCRATNEHGDKYFETLVQ 393
Score = 88.8 bits (220), Expect = 2e-18
Identities = 34/238 (14%), Positives = 56/238 (23%), Gaps = 52/238 (21%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
K P P ++ E+ EC + + + W +GK+ + +
Sbjct: 5 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQG-VKYSWKKDGKSYNWQEHNAALRKDEGS 63
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
L D G Y C A G A +S ++ +
Sbjct: 64 -LVFLRPQASDEGHYQCFAETPAGVA-SSRVISFR------------------------- 96
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
K ++ + E DC L P + P I W
Sbjct: 97 ---------------KTYLIASPAKTHE-KTPIEGRPFQLDCVL-PNAYPKPLITWKKRL 139
Query: 1095 RP-------FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
R+ D + D +Y+C A N
Sbjct: 140 SGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEY 197
Score = 87.7 bits (217), Expect = 5e-18
Identities = 42/316 (13%), Positives = 64/316 (20%), Gaps = 103/316 (32%)
Query: 601 VIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W +GK L L + G Y+C A G ++
Sbjct: 37 VKYSWKKDGKSYNWQEHNAALRKDEGS-LVFLRPQASDEGHYQCFAETPAGVASSRV--- 92
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
R+T
Sbjct: 93 ------------------------------ISFRKTY--------LIASPAKTHEKT-PI 113
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKT-------GSRFRTFCDFGFVILEISPVY 773
EG + L P PK + W R D ++
Sbjct: 114 EGRPFQLDCVL-PNAYPKPLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKED 172
Query: 774 PEDCGQYSCRAYNDYGEA-VTSASMKVQGKR-------------------------SIIL 807
D +Y C A N + V +++G ++
Sbjct: 173 VSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQYVSKDMMAKAGDVTMI 232
Query: 808 E-----------------SQLPKGMEVFISFH--------EISPVYPEDCGQYSCRAYND 842
+ E I+ H PED G Y+C N
Sbjct: 233 YCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNG 292
Query: 843 YGEAVT-SASMKVQGK 857
G+ S + V
Sbjct: 293 VGKPQKHSLKLTVVSA 308
Score = 61.1 bits (148), Expect = 2e-09
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P + W N PLS G R T L I ++ D Y C+ATN G+
Sbjct: 336 LPAPNVVWSHNAKPLS-GGRATVTDS----GLVIKGVKNGDKGYYGCRATNEHGDKYFET 390
Query: 66 TLKI 69
+++
Sbjct: 391 LVQV 394
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor
protein tyrosine phosphatase; HET: NAG; 2.00A {Mus
musculus} PDB: 3jxa_A*
Length = 384
Score = 191 bits (487), Expect = 3e-53
Identities = 84/447 (18%), Positives = 136/447 (30%), Gaps = 102/447 (22%)
Query: 1424 PPRFVTQ--IKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
P FV + E + K C++ G+P + W LNG + DF
Sbjct: 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVK--GNPKPHIRWKLNGTDVD------IGMDFR 56
Query: 1482 YVAMN-----FGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKS 1535
Y ++ +D+G Y C ATN +G +R A L+
Sbjct: 57 YSVVDGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLE-------------- 102
Query: 1536 IEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRV 1594
V+ G+ C
Sbjct: 103 ---------------------------NFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSY 135
Query: 1595 MWLINGHTIVNEIVRKITA------------------------TETTEMEHKGKIQERV- 1629
W+ N + + R ++ T T +
Sbjct: 136 AWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILR 195
Query: 1630 VDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED-FPITSSPDFQI 1688
D +P + + + A + + E G+P+PTI W R D PI
Sbjct: 196 NDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHK 255
Query: 1689 HTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTT 1748
IL + ED+G + +AEN GK L P+++
Sbjct: 256 SN----GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA----------QPNWVQI 301
Query: 1749 ISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVE 1808
I+ + + + ++ K + WLKNG ++ R + E TL I +
Sbjct: 302 INDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTRDRIQI--EQG--TLNITIVNLS 357
Query: 1809 DSGAYECVAMNNAGEARCEAELVVQSK 1835
D+G Y+CVA N G AEL V ++
Sbjct: 358 DAGMYQCVAENKHGVIFSSAELSVIAE 384
Score = 156 bits (396), Expect = 3e-41
Identities = 71/372 (19%), Positives = 125/372 (33%), Gaps = 64/372 (17%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA--- 392
G+ + + NG ++ R G +++ K +D G Y C ATN +G
Sbjct: 34 GNPKPHIRWKLNGTDVDIGMDFRYSVVDGSLLI-NNPNKTQDAGTYQCIATNSFGTIVSR 92
Query: 393 EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
E + F + +S ++ G C P + EL W N P
Sbjct: 93 EAKLQF-------AYLENFKTRTRSTVSVRRGQGMVLLCGP-PPHSGELSYAWIFNEYPS 144
Query: 453 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIF 501
+ NR + + G + IA V+ D G Y C N + + +
Sbjct: 145 YQDNRRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGE 202
Query: 502 HQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGSRVKTVYDFG 560
++ ++ + + + V +C +P I W +G+P A +R
Sbjct: 203 YEPKIEVQFPETVPAEKGTTVKLEC--FALGNPVPTILWRRADGKPIARKARRHKSNG-- 258
Query: 561 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI------------------------- 595
L++ D+G Y C A N G + K ++
Sbjct: 259 --ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWE 316
Query: 596 CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
CK W NG L R + + I + ++G+Y+C A NK+G
Sbjct: 317 CKANGRPKPTYRWLKNGDPLLTRDRIQ-IEQGTLNITIVN---LSDAGMYQCVAENKHGV 372
Query: 653 DVTKASLKCVSK 664
+ A L +++
Sbjct: 373 IFSSAELSVIAE 384
Score = 155 bits (393), Expect = 6e-41
Identities = 77/450 (17%), Positives = 124/450 (27%), Gaps = 121/450 (26%)
Query: 406 GQPPKFTSHIKSLEGLKD--GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
G P F + D C + +P+ + W NG + +
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKG--NPKPHIRWKLNGTDVDIGMDFRYSVV 60
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRLPSPSQ 511
G +++ ++ D+G Y C A N F ++ F ++
Sbjct: 61 DGSLLI-NNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKT----------RTR 109
Query: 512 DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYA 571
+ V + C P + W FN P +R + G +L + V
Sbjct: 110 STVSVRRGQGMVLLCGP-PPHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEK 166
Query: 572 RDSGEYICRATNKWGTAMTKAKVI------------------------------------ 595
D G Y C TN
Sbjct: 167 SDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLE 226
Query: 596 CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
C L + W K R + + I + +E++G YEC A N G
Sbjct: 227 CFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNF---QQEDAGSYECVAENSRGK 283
Query: 653 DVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVP 712
+V K L P +
Sbjct: 284 NVAKGQLT-------FYA-----------------------------------QPNWVQI 301
Query: 713 LSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPV 772
+++I + E+ +E + PK W NG P+ T R + L I+ V
Sbjct: 302 INDIH-VAMEESVFWECK--ANGRPKPTYRWLKNGDPLLTRDRIQIEQG----TLNITIV 354
Query: 773 YPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
D G Y C A N +G +SA + V +
Sbjct: 355 NLSDAGMYQCVAENKHGVIFSSAELSVIAE 384
Score = 155 bits (393), Expect = 7e-41
Identities = 54/348 (15%), Positives = 100/348 (28%), Gaps = 48/348 (13%)
Query: 1559 PKEAPVFVSQPEAQKVQ---EGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITAT 1614
P PVFV +P E + + C V G P+P + W +NG + + + +
Sbjct: 2 PGSGPVFVQEPSHVMFPLDSEEKKVKLSC-EVKGNPKPHIRWKLNGTDVDIGMDFRYSVV 60
Query: 1615 E-------TTEMEHKGKIQ-----ERVVDASEK-----PAKPPVFTKKIQPCRAFEQDQA 1657
+ + + G Q S + T+
Sbjct: 61 DGSLLINNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGM 120
Query: 1658 RFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 1716
+ W ++P D + L + +V D G + + N
Sbjct: 121 VLLCGPPPHSGELSYAWIFNEYPSY--QDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTN 178
Query: 1717 R-GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVY 1775
+ + G G P + + G + + +
Sbjct: 179 TVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTIL 238
Query: 1776 WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
W + K I + L I ED+G+YECVA N+ G+ + +L
Sbjct: 239 WRRADGKPIARKARRHKSNG---ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFY-- 293
Query: 1836 KAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + D +V +V +C+ G+P+
Sbjct: 294 -----------------AQPNWVQIINDIHVAMEESVFWECKANGRPK 324
Score = 150 bits (380), Expect = 3e-39
Identities = 81/386 (20%), Positives = 135/386 (34%), Gaps = 57/386 (14%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIV-GAYAEDSGIYTVKATNSKGSATTSGTL 295
P W +N + G F+ + G +L I +D+G Y ATNS G+ +
Sbjct: 38 PHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQCIATNSFGTIVSREA- 94
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
+L F + + ++ G+ P ++ +++N P +
Sbjct: 95 ----KLQF-AYLENFKTRTRSTVSVRRGQGMVLLCG-PPPHSGELSYAWIFNEYPSYQDN 148
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKSKGQPPK 410
R G L I + D G YTC TN + L PK
Sbjct: 149 RRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPK 206
Query: 411 FTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFH-NGKPIFHKNRVKMVSDFGFVV 468
+ G + EC +P + W +GKPI K R + +
Sbjct: 207 IEVQFPETVPAEKGTTVKLEC---FALGNPVPTILWRRADGKPIARKARRHKSNG----I 259
Query: 469 MDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPE 518
++I Q D+G Y C A N+ + P + +++ + ++ V
Sbjct: 260 LEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQP------NWVQIIN----DIHVAM 309
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 578
V ++C + P W NG P T R++ +L++ V D+G Y
Sbjct: 310 EESVFWEC--KANGRPKPTYRWLKNGDPLLTRDRIQIEQG----TLNITIVNLSDAGMYQ 363
Query: 579 CRATNKWGTAMTKAKVICKVLTVIVE 604
C A NK G + A+ L+VI E
Sbjct: 364 CVAENKHGVIFSSAE-----LSVIAE 384
Score = 145 bits (368), Expect = 1e-37
Identities = 80/410 (19%), Positives = 128/410 (31%), Gaps = 77/410 (18%)
Query: 109 PVFISHLNDV---ECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
PVF+ + V E + V C V+ + P+ + W NG
Sbjct: 6 PVFVQEPSHVMFPLDSEEKKVKLSCEVKGN-------------------PKPHIRWKLNG 46
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKF--KTTHDFGY 223
+ + G +++ ++ D+G Y C N G + F Y
Sbjct: 47 TDVDIGMDFRYSVVDGSLLI-NNPNKTQDAGTYQC--IATN---SFGTIVSREAKLQFAY 100
Query: 224 VALDIELMLKTLV-------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVA 264
+ T+ W N P + + + G
Sbjct: 101 LENFKTRTRSTVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETG--N 158
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSG---TLKCLERLFVNHNYPLFSLQFQHLSNLS 321
L I D G YT TN+ + G L + P +QF
Sbjct: 159 LYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAE 218
Query: 322 EGEIAHFE--ASLIPVGDQTMTVE-FLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDT 378
+G E A G+ T+ +GKPI R + +LEI + ED
Sbjct: 219 KGTTVKLECFAL----GNPVPTILWRRADGKPIARKARRHKSNG----ILEIPNFQQEDA 270
Query: 379 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVND 438
G Y C A N G+ L P + I + + +S +EC
Sbjct: 271 GSYECVAENSRGKNVAKGQLT-FY----AQPNWVQIINDIH-VAMEESVFWECKAN--GR 322
Query: 439 PELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
P+ W NG P+ ++R+++ ++I V D+G Y C A N
Sbjct: 323 PKPTYRWLKNGDPLLTRDRIQIEQG----TLNITIVNLSDAGMYQCVAEN 368
Score = 142 bits (359), Expect = 2e-36
Identities = 87/435 (20%), Positives = 131/435 (30%), Gaps = 114/435 (26%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSI-NSLRADDSAIYTCKATNLLGE 60
E + +P I W NG + +G R + G +L I N + D+ Y C ATN G
Sbjct: 31 EVKGNPKPHIRWKLNGTDVDIGMDFRYSVVDG--SLLINNPNKTQDAGTYQCIATNSFGT 88
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
VS L+ L + V
Sbjct: 89 IVSR------------EAKLQFAYLE----------------------NFKTRTRSTVSV 114
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
+ + + C P EL W N P + NR + +
Sbjct: 115 RRGQGMVLLCGPPPH------------------SGELSYAWIFNEYPSYQDNRRFVSQET 156
Query: 181 GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLK------- 233
G + IA V+ D G Y C V N + + +M +
Sbjct: 157 G--NLYIAKVEKSDVGNYTC--VVTN---TVTNHKVLGPPTPLILRNDGVMGEYEPKIEV 209
Query: 234 --------------TL--------VPFTEWF-VNNKPLPAGAKFKTTHDFGYVALDIVGA 270
L VP W + KP+ A+ H + L+I
Sbjct: 210 QFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARR---HKSNGI-LEIPNF 265
Query: 271 YAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF-- 328
ED+G Y A NS+G G L + P + + ++ E +
Sbjct: 266 QQEDAGSYECVAENSRGKNVAKGQLTFYAQ-------PNWVQIINDIH-VAMEESVFWEC 317
Query: 329 EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK 388
+A+ G T +L NG P+ RI+ L I + D G+Y C A NK
Sbjct: 318 KAN----GRPKPTYRWLKNGDPLLTRDRIQIEQG----TLNITIVNLSDAGMYQCVAENK 369
Query: 389 WGQAEISVNLECVDK 403
G S L + +
Sbjct: 370 HGVIFSSAELSVIAE 384
Score = 141 bits (356), Expect = 4e-36
Identities = 84/488 (17%), Positives = 139/488 (28%), Gaps = 152/488 (31%)
Query: 706 APVFTVPLSNI--DDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDF 762
PVF S++ E + + +PK + W NG + G FR + D
Sbjct: 5 GPVFVQEPSHVMFPLDSEEKKVKLSCEVKG--NPKPHIRWKLNGTDVDIGMDFRYSVVDG 62
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ----------- 810
+I +P +D G Y C A N +G V+ A ++ + ++
Sbjct: 63 SLLI--NNPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVRRGQGM 120
Query: 811 -----------------------LPKGMEVFISFH----EISPVYPEDCGQYSCRAYNDY 843
+ F+S I+ V D G Y+C N
Sbjct: 121 VLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTV 180
Query: 844 GEA-VTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYG 902
V + + ++ P
Sbjct: 181 TNHKVLGPPTPLILRNDGVMGEYEP----------------------------------- 205
Query: 903 HEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSA 961
+ P + + T EC +P T+ W +GK ++
Sbjct: 206 --------------KIEVQFPETVPAEKGTTVKLECF--ALGNPVPTILWRRADGKPIAR 249
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
+R N ILEI + D+G Y C A N G+ +LT
Sbjct: 250 KARRHKSNG----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA----------- 294
Query: 1022 AIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPK 1081
P + + D + V V ++C +
Sbjct: 295 -------------------------------QPNWVQIIND-IHVAMEESVFWEC--KAN 320
Query: 1082 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 1141
P W NG P T R++ +L++ V D+G Y C A NK G +
Sbjct: 321 GRPKPTYRWLKNGDPLLTRDRIQIEQG----TLNITIVNLSDAGMYQCVAENKHGVIFSS 376
Query: 1142 AKVICKAK 1149
A++ A+
Sbjct: 377 AELSVIAE 384
Score = 141 bits (356), Expect = 4e-36
Identities = 76/491 (15%), Positives = 134/491 (27%), Gaps = 127/491 (25%)
Query: 1261 PEEPPRFITEIESVTVQEA---EPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINIS 1314
P P F+ E V + V+ V+ P + F + +
Sbjct: 2 PGSGPVFVQEPSHVMFPLDSEEKKVKLSCEVKGNPKPHIRWKLNGTDVDIGMDFRYSVVD 61
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
+ LI N +D G Y C A N G ++
Sbjct: 62 GSLLINNP-----------------------NKTQDAGTYQCIATNSFGTIVSR------ 92
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
EA +Q F T+ ++
Sbjct: 93 ------------------EAKLQFAY-----------------------LENFKTRTRST 111
Query: 1435 DQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPED 1494
+ Q C P + W N P NR + G + V D
Sbjct: 112 VSVRRGQGMVLLCG-PPPHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSD 168
Query: 1495 SGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLV 1554
G Y C TN + + ++
Sbjct: 169 VGNYTCVVTNTVTNHKVLG----------------------------PPTPLILRNDGVM 200
Query: 1555 EDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITAT 1614
+ +P + V PE ++G + G P P ++W + R+ +
Sbjct: 201 GEYEP---KIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSN 257
Query: 1615 ET-----TEMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEV 1661
+ E G + E + + P + + I ++ +E
Sbjct: 258 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWEC 317
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
+ +G P PT +W + P+ + QI + L + V + D+G++ +AEN+ G
Sbjct: 318 KANGRPKPTYRWLKNGDPLLTRDRIQI----EQGTLNITIVNLSDAGMYQCVAENKHGVI 373
Query: 1722 KCSANLVVEEK 1732
SA L V +
Sbjct: 374 FSSAELSVIAE 384
Score = 129 bits (325), Expect = 6e-32
Identities = 78/432 (18%), Positives = 121/432 (28%), Gaps = 124/432 (28%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P+F+ PS LD E KV C E K +P I W NG G +
Sbjct: 6 PVFVQE----PSHVMFPLDSEE-KKVKLSC--EVKGNPKPHIRWKLNGTDVDIGMDFRYS 58
Query: 557 YDFG--FISLDMDYVYARDSGEYICRATNKWGTAMT-KAKVI------------------ 595
G I+ + +D+G Y C ATN +GT ++ +AK+
Sbjct: 59 VVDGSLLIN---NPNKTQDAGTYQCIATNSFGTIVSREAKLQFAYLENFKTRTRSTVSVR 115
Query: 596 --------CKVL----TVIVEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVY 642
C + W +N R+ + + I + + + G Y
Sbjct: 116 RGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVE---KSDVGNY 172
Query: 643 ECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIE 702
C TN + L +
Sbjct: 173 TCVVTNTVTNHKVLGP-------------------------------PTPLILRNDGVMG 201
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFE--ARLTPTDDPKLKVEWF-WNGKPMKTGSRFRTF 759
+ + + +G E A +P + W +GKP+ +R
Sbjct: 202 EYEPKIEVQFPETVP-AEKGTTVKLECFA----LGNPVPTILWRRADGKPIARKARRHKS 256
Query: 760 CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGME 816
ILEI ED G Y C A N G+ V + + + + +
Sbjct: 257 NG----ILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEES 312
Query: 817 VFIS-------------FHE------------------ISPVYPEDCGQYSCRAYNDYGE 845
VF I+ V D G Y C A N +G
Sbjct: 313 VFWECKANGRPKPTYRWLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGV 372
Query: 846 AVTSASMKVQGK 857
+SA + V +
Sbjct: 373 IFSSAELSVIAE 384
Score = 93.7 bits (233), Expect = 4e-20
Identities = 40/229 (17%), Positives = 64/229 (27%), Gaps = 52/229 (22%)
Query: 914 GKAPEFLTTPTDLTLAESTL---AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIND 970
G P F+ P+ + + C +P + W NG + G +
Sbjct: 3 GSGPVFVQEPSHVMFPLDSEEKKVKLSCE--VKGNPKPHIRWKLNGTDVDIGMDFRYSVV 60
Query: 971 FG-FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATK 1029
G +I N +D+G Y C ATN G S + ++
Sbjct: 61 DGSLLI--NNPNKTQDAGTYQCIATNSFGTI-VSREAKLQ-------------------- 97
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRID 1089
F ++ + + V + C P +
Sbjct: 98 --------------------FAYLENFKTRTRSTVSVRRGQGMVLLCGP-PPHSGELSYA 136
Query: 1090 WFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
W FN P +R + G +L + V D G Y C TN
Sbjct: 137 WIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSDVGNYTCVVTNTVTNH 183
Score = 93.0 bits (231), Expect = 7e-20
Identities = 50/329 (15%), Positives = 95/329 (28%), Gaps = 96/329 (29%)
Query: 600 TVIVEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKAS 658
+ W NG + G +R + D ++I + +++G Y+C ATN +G+ V++
Sbjct: 37 KPHIRWKLNGTDVDIGMDFRYSVVDGSLLINNPNK--TQDAGTYQCIATNSFGTIVSRE- 93
Query: 659 LKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDD 718
A L+ + + R +V
Sbjct: 94 --------------------------------AKLQFAYLENFKTRTRSTVSV------- 114
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
R G+ P +L W +N P +R + G L I+ V D G
Sbjct: 115 -RRGQGMVLLCGP-PPHSGELSYAWIFNEYPSYQDNRRFVSQETG--NLYIAKVEKSDVG 170
Query: 779 QYSCRAYNDYGEA----------VTSASMKVQGKRSIILES------------------- 809
Y+C N + + + + + I ++
Sbjct: 171 NYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFAL 230
Query: 810 --------------QLPKGMEVFISFH---EISPVYPEDCGQYSCRAYNDYGEAVTSASM 852
+ + EI ED G Y C A N G+ V +
Sbjct: 231 GNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQL 290
Query: 853 KVQGKRSIILESQLPKGMEGTIDKIAELE 881
+ + + Q+ + +++ E
Sbjct: 291 TFYAQPNWV---QIINDIHVAMEESVFWE 316
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A
2f8v_A
Length = 194
Score = 183 bits (466), Expect = 6e-53
Identities = 60/198 (30%), Positives = 100/198 (50%), Gaps = 9/198 (4%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS--PDFQIHTFSTKS 1695
+ P FT+ +Q E A FE G P+P + WFR+ I++S P QI ++
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRA 63
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
L + V +SG +++ A N G+A +A L+V+ + PP+F+ + S +
Sbjct: 64 KLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAET-------APPNFVQRLQSMTVR 116
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
G R +++ V + ++G +I + ++ +E +L++LLI EA EDSG Y
Sbjct: 117 QGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSV 176
Query: 1816 VAMNNAGEARCEAELVVQ 1833
A N+ G A AEL+VQ
Sbjct: 177 NATNSVGRATSTAELLVQ 194
Score = 148 bits (376), Expect = 9e-41
Identities = 54/233 (23%), Positives = 90/233 (38%), Gaps = 46/233 (19%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSR--IKTINDFG 972
+AP F + + E + A FE ++ P V WF +G+ +S + ++ G
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSDG 61
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
L I V +SG Y+ KATN G+AT++ +L VK
Sbjct: 62 RAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVK----------------------- 98
Query: 1033 KLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF 1092
+ PP F +LQ + V + +V R+ PT + ++
Sbjct: 99 ----------------AETAPPNFVQRLQS-MTVRQGSQVRLQVRVT--GIPTPVVKFYR 139
Query: 1093 NGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+G + + + SL + Y DSG Y ATN G A + A+++
Sbjct: 140 DGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELL 192
Score = 142 bits (361), Expect = 9e-39
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 21/191 (10%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET---- 1616
+AP F ++ V EG A F ++G+P P V W +G I + + + +
Sbjct: 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRA 63
Query: 1617 ------TEMEHKGKIQ--------ERVVDAS---EKPAKPPVFTKKIQPCRAFEQDQARF 1659
+ G+ + A + PP F +++Q + Q R
Sbjct: 64 KLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRL 123
Query: 1660 EVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 1719
+V G P P +K++R+ I SS DFQI L++ + + EDSG ++V A N G
Sbjct: 124 QVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVG 183
Query: 1720 KAKCSANLVVE 1730
+A +A L+V+
Sbjct: 184 RATSTAELLVQ 194
Score = 128 bits (323), Expect = 1e-33
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGM 365
P F+ Q + + EG A FEA + G V + +G+ I S ++ + G
Sbjct: 6 PTFTQPLQSVV-VLEGSTATFEAHI--SGFPVPEVSWFRDGQVISTSTLPGVQISFSDGR 62
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L I ++G Y+ +ATN GQA + L ++ PP F ++S+ ++ G
Sbjct: 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETA--PPNFVQRLQSMT-VRQGS 119
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCR 485
+ +T P V+++ +G I ++ + + IA DSG Y
Sbjct: 120 QVRLQVRVT--GIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVN 177
Query: 486 AWN 488
A N
Sbjct: 178 ATN 180
Score = 124 bits (314), Expect = 2e-32
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD--IRYKTLEEDNL 1797
P+F + S V+ G A F+A IS +V W ++G+ I + D
Sbjct: 3 TQAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGR 62
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTV 1857
L I +SG Y A N +G+A AEL+V+++ AP P
Sbjct: 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAP----------------PNF 106
Query: 1858 AEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ L+ V++GS V L+ R+TG P
Sbjct: 107 VQRLQSMTVRQGSQVRLQVRVTGIPT 132
Score = 117 bits (296), Expect = 5e-30
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 26/202 (12%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH--KNRVKMVSDF 464
Q P FT ++S+ + +G +A FE ++ P +V WF +G+ I V++
Sbjct: 4 QAPTFTQPLQSVV-VLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSD 60
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWN-----------NFIFIPPFPIFIFHQIRLPSPSQDN 513
G + I V +SG Y +A N P F+ +
Sbjct: 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQR------LQ--S 112
Query: 514 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARD 573
+ V + +V R+ PT + ++ +G + + + SL + Y D
Sbjct: 113 MTVRQGSQVRLQVRVT--GIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPED 170
Query: 574 SGEYICRATNKWGTAMTKAKVI 595
SG Y ATN G A + A+++
Sbjct: 171 SGTYSVNATNSVGRATSTAELL 192
Score = 116 bits (292), Expect = 1e-29
Identities = 38/198 (19%), Positives = 68/198 (34%), Gaps = 54/198 (27%)
Query: 6 DPNLKIEWFKNGVPLSLGSR--IRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
P ++ WF++G +S + ++ +F G L+I ++ +S Y+ KATN G+A S
Sbjct: 32 FPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATS 91
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
T L ++ + P P F+ L + ++
Sbjct: 92 TAELLVKA---------------------------ETAP------PNFVQRLQSMTVRQG 118
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
V RV G P V+++ +G I ++ +
Sbjct: 119 SQVRLQVRVT---------GI----------PTPVVKFYRDGAEIQSSLDFQISQEGDLY 159
Query: 184 VMDIAYVQSHDSGEYVCQ 201
+ IA DSG Y
Sbjct: 160 SLLIAEAYPEDSGTYSVN 177
Score = 116 bits (292), Expect = 1e-29
Identities = 44/200 (22%), Positives = 69/200 (34%), Gaps = 44/200 (22%)
Query: 603 VEWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V WF +G+ + + G L I + NSG Y +ATN G + A L
Sbjct: 37 VSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELL 96
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
P F L ++ +R
Sbjct: 97 VK---------------------------------------AETAPPNFVQRLQSMT-VR 116
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
+G + R T P V+++ +G +++ F+ + L I+ YPED G Y
Sbjct: 117 QGSQVRLQVR--VTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTY 174
Query: 781 SCRAYNDYGEAVTSASMKVQ 800
S A N G A ++A + VQ
Sbjct: 175 SVNATNSVGRATSTAELLVQ 194
Score = 108 bits (271), Expect = 1e-26
Identities = 40/165 (24%), Positives = 66/165 (40%), Gaps = 9/165 (5%)
Query: 237 PFTEWFVNNKPLPAGA--KFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
P WF + + + + + G L I +SG Y++KATN G AT++
Sbjct: 35 PEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAE 94
Query: 295 LKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS 354
L P F + Q ++ + +G + G T V+F +G I++S
Sbjct: 95 LLVKAETAP----PNFVQRLQSMT-VRQGSQVRLQVR--VTGIPTPVVKFYRDGAEIQSS 147
Query: 355 HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ + L I ED+G Y+ ATN G+A + L
Sbjct: 148 LDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAELL 192
Score = 107 bits (268), Expect = 3e-26
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 46/194 (23%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR--FRTFCDF 762
QAP FT PL ++ + EG A FEA ++ P +V WF +G+ + T + +
Sbjct: 4 QAPTFTQPLQSVV-VLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSD 60
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK------------------RS 804
G L I V + G+YS +A N G+A ++A + V+ +
Sbjct: 61 GRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQ 120
Query: 805 IILE-----------------SQLPKGMEVFISFH------EISPVYPEDCGQYSCRAYN 841
+ L+ +++ ++ IS I+ YPED G YS A N
Sbjct: 121 VRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATN 180
Query: 842 DYGEAVTSASMKVQ 855
G A ++A + VQ
Sbjct: 181 SVGRATSTAELLVQ 194
Score = 105 bits (265), Expect = 7e-26
Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 58/187 (31%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
I V + G+YS +A N G AEL
Sbjct: 66 TIPAVTKANSGRYSLKATNGS----------------------------GQATSTAEL-- 95
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
++ + P F+ +T+ + + + R
Sbjct: 96 -------------------------LVKAET-APPNFVQRLQSMTVRQGSQVRLQVR--V 127
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATT 1002
T P+ V+++ +G + + + + L I + Y DSG Y+ ATN G AT+
Sbjct: 128 TGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187
Query: 1003 SCKLTVK 1009
+ +L V+
Sbjct: 188 TAELLVQ 194
Score = 104 bits (260), Expect = 3e-25
Identities = 40/186 (21%), Positives = 62/186 (33%), Gaps = 46/186 (24%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF- 1480
Q P F + Q +V + FE ++ G P +V WF +G+ + F
Sbjct: 4 QAPTFTQPL--QSVVVLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFS 59
Query: 1481 -GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
G + V +SG Y +ATN G + A L +
Sbjct: 60 DGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAET------------------ 101
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLIN 1599
P FV + ++ V++G R RVTG P P V + +
Sbjct: 102 ---------------------APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRD 140
Query: 1600 GHTIVN 1605
G I +
Sbjct: 141 GAEIQS 146
Score = 103 bits (258), Expect = 5e-25
Identities = 48/261 (18%), Positives = 79/261 (30%), Gaps = 79/261 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFI-------NIS 1314
+ P F ++SV V E FE + P P + IS
Sbjct: 3 TQAPTFTQPLQSVVVLEGSTATFEAHI--SGFPV-------------PEVSWFRDGQVIS 47
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
T+ + F G L I V + G Y +A N G+A + A + K
Sbjct: 48 TS---------TLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVK 98
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
+ PP FV ++++
Sbjct: 99 ---------------------------------------------AETAPPNFVQRLQSM 113
Query: 1435 DQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPED 1494
+ + + + + G P V+++ +G + F + ++ YPED
Sbjct: 114 -TVRQGSQVRLQVR--VTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPED 170
Query: 1495 SGEYLCRATNLYGMDETRAIL 1515
SG Y ATN G + A L
Sbjct: 171 SGTYSVNATNSVGRATSTAEL 191
Score = 102 bits (256), Expect = 1e-24
Identities = 44/215 (20%), Positives = 73/215 (33%), Gaps = 47/215 (21%)
Query: 104 LVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
+ +P F L V E F+ + G P +V WF
Sbjct: 1 MTTQAPTFTQPLQSVVVLEGSTATFEAHIS---------G----------FPVPEVSWFR 41
Query: 164 NGKPIFH--KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH-- 219
+G+ I V++ G + I V +SG Y N +G T
Sbjct: 42 DGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL--KATN---GSGQATSTAELL 96
Query: 220 --------DFGYVALDIELMLKTLVPFT-----------EWFVNNKPLPAGAKFKTTHDF 260
+F + + + V +++ + + + F+ + +
Sbjct: 97 VKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEG 156
Query: 261 GYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+L I AY EDSG Y+V ATNS G AT++ L
Sbjct: 157 DLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Score = 100 bits (252), Expect = 4e-24
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR--VKTVYDFGFISLDMDYVY 570
++ V E F+ + P + WF +G+ +T + V+ + G L + V
Sbjct: 14 SVVVLEGSTATFEAHIS--GFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVT 71
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI----------------------------CKVL--- 599
+SG Y +ATN G A + A+++ +V
Sbjct: 72 KANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP 131
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
T +V+++ +G ++ ++ + + L I Y E+SG Y ATN G + A L
Sbjct: 132 TPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATSTAEL 191
Score = 72.1 bits (177), Expect = 4e-14
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
V P ++++++G + + + + L +L I +DS Y+ ATN +G
Sbjct: 125 VRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGR 184
Query: 61 AVSTCTLKIE 70
A ST L ++
Sbjct: 185 ATSTAELLVQ 194
Score = 57.0 bits (138), Expect = 4e-09
Identities = 26/129 (20%), Positives = 39/129 (30%), Gaps = 49/129 (37%)
Query: 1259 EIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLS 1303
+ PP F+ ++S+TV++ VR + RV P V ++
Sbjct: 98 KAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQIS---- 153
Query: 1304 TAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHG 1363
+ SL I YPED G Y A N G
Sbjct: 154 ------------------------------QEGDLYSLLIAEAYPEDSGTYSVNATNSVG 183
Query: 1364 EAFTKATIS 1372
A + A +
Sbjct: 184 RATSTAELL 192
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like
D; 3.50A {Homo sapiens}
Length = 317
Score = 187 bits (476), Expect = 1e-52
Identities = 48/254 (18%), Positives = 88/254 (34%), Gaps = 8/254 (3%)
Query: 1634 EKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPITSSPDFQIHTFS 1692
P P F + + + + + I W++++ I S D +
Sbjct: 2 IDPFTGPHFVEYLSW-EVTGECNVLLKCKVANIKKETHIVWYKDEREI--SVDEKHDFKD 58
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
L++ + +D+G++ VI ++ GK K LV E ++ V L+
Sbjct: 59 GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMME-VCKKIALSATDLK 117
Query: 1753 VINVGQLARFDAKISATKP-LDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSG 1811
+ + + + + ++ L V W NG I R KT L I E D G
Sbjct: 118 IQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKG 177
Query: 1812 AYECVAMNNAGEARCEAELVVQSKKAPGK--QAPAPGAAVAQDEAPTVAEPLKDQNVKEG 1869
Y + + +L Q+ Q A ++ A + ++EG
Sbjct: 178 KYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEG 237
Query: 1870 SAVTLKCRITGKPR 1883
A+ L C + G P
Sbjct: 238 KALNLTCNVWGDPP 251
Score = 168 bits (427), Expect = 3e-46
Identities = 52/358 (14%), Positives = 96/358 (26%), Gaps = 94/358 (26%)
Query: 701 IEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFC 760
I+ P F LS ++ N + ++ + + W+ + + + +
Sbjct: 2 IDPFTGPHFVEYLS--WEVTGECNVLLKCKVANIK-KETHIVWYKDEREISVDEKHDF-- 56
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLP-------- 812
G L I+ +D G Y +D G+ + + + + +++E
Sbjct: 57 KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDL 116
Query: 813 ----------------------------KGMEVFISFH------------EISPVYPEDC 832
G + S +I+ P D
Sbjct: 117 KIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDK 176
Query: 833 GQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTI 892
G+Y ++ + + Q E Q K
Sbjct: 177 GKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLK------------------------ 212
Query: 893 DKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW 952
+ +A P +T+ E + C DP V W
Sbjct: 213 --------------QAAIAEKNRARVLGGLPDVVTIQEGKALNLTCN--VWGDPPPEVSW 256
Query: 953 FHNGKALSAGSRIKTINDF-GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
N KAL++ + IN V DSG Y NK+G T+ ++V
Sbjct: 257 LKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 314
Score = 167 bits (423), Expect = 1e-45
Identities = 48/325 (14%), Positives = 91/325 (28%), Gaps = 66/325 (20%)
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS 574
+V V C++ I W+ + R + + + G +L + +D+
Sbjct: 17 EVTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDA 73
Query: 575 GEYICRATNKWGTAMTKAKVICKVLTVI-------------------------------- 602
G Y + G ++ K++ + +
Sbjct: 74 GIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTY 133
Query: 603 ------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
V W +NG + + R +T + L I + G Y +
Sbjct: 134 YVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT 193
Query: 657 ASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNI 716
L + E Q R + A E +A V +
Sbjct: 194 VDLSGQAYDEAYAEFQ---------------------RLKQAAIAEKNRARVLGGLPDVV 232
Query: 717 DDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF-GFVILEISPVYPE 775
++EG+ + DP +V W N K + + + I+ V
Sbjct: 233 -TIQEGKALNLTCN--VWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTA 289
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQ 800
D G+Y N YG + ++ V
Sbjct: 290 DSGKYGLVVKNKYGSETSDFTVSVF 314
Score = 165 bits (419), Expect = 4e-45
Identities = 49/323 (15%), Positives = 90/323 (27%), Gaps = 76/323 (23%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
I+ +D G Y +D G+ + + + + +++E + T
Sbjct: 64 LITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSAT--------- 114
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
+ AE +
Sbjct: 115 ---------------------------------------DLKIQSTAEGIQLYSFV---T 132
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATT 1002
+ V W HNG A+ R+KT + L+IN+ D G Y + +
Sbjct: 133 YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQK 192
Query: 1003 SCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQD 1062
+ L+ + E Q + EK V L D
Sbjct: 193 TVDLSGQAYDEAYAEFQRL---------------------KQAAIAEKNRARVLG-GLPD 230
Query: 1063 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF-GFISLDMDYVYA 1121
+ + E ++ C DP + W N + A+ ++ ++ V
Sbjct: 231 VVTIQEGKALNLTCN--VWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVST 288
Query: 1122 RDSGEYICRATNKWGTAMTKAKV 1144
DSG+Y NK+G+ + V
Sbjct: 289 ADSGKYGLVVKNKYGSETSDFTV 311
Score = 164 bits (416), Expect = 1e-44
Identities = 41/314 (13%), Positives = 76/314 (24%), Gaps = 38/314 (12%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGY-PRPRVMWLINGHTIVNEIVRKITATE 1615
P P FV + + +V +V ++W + I +
Sbjct: 2 IDPFTGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGI 60
Query: 1616 TT------EMEHKGKIQ--------ERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEV 1661
T + G + + ++ A + +
Sbjct: 61 CTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQS 120
Query: 1662 EFDGDPL----------PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 1711
+G L + W I S + + L + + D G +
Sbjct: 121 TAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYV 180
Query: 1712 VIAENRGGKAKCSANLVVEE-----------KRQGGRGGVVPPSFLTTISSAVINVGQLA 1760
+ + + + +L + K+ I G+
Sbjct: 181 MELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKAL 240
Query: 1761 RFDAKISATKPLDVYWLKNGKKIIPDIRYK-TLEEDNLFTLLIIEAVVEDSGAYECVAMN 1819
+ P +V WLKN K + D E I DSG Y V N
Sbjct: 241 NLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKN 300
Query: 1820 NAGEARCEAELVVQ 1833
G + + V
Sbjct: 301 KYGSETSDFTVSVF 314
Score = 163 bits (415), Expect = 2e-44
Identities = 47/273 (17%), Positives = 88/273 (32%), Gaps = 24/273 (8%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W+ + + + K G L I +D+GIY V + +G + L
Sbjct: 36 ETHIVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 93
Query: 296 KCLERL-FVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS 354
+ +L L S E S + + + V + +NG I S
Sbjct: 94 VDEAFKELMMEVCKKIALSATDLKIQSTAE-GIQLYSFVTYYVEDLKVNWSHNGSAIRYS 152
Query: 355 HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL---------------- 398
R++T + L+I D G Y + + +V+L
Sbjct: 153 DRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLK 212
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 458
+ K + + +++G + + C + DP +V W N K + +
Sbjct: 213 QAAIAEKNRARVLGGLPDVVT-IQEGKALNLTCNVW--GDPPPEVSWLKNEKALASDDHC 269
Query: 459 KMVSDF-GFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ + I V + DSG+Y N +
Sbjct: 270 NLKFEAGRTAYFTINGVSTADSGKYGLVVKNKY 302
Score = 158 bits (402), Expect = 9e-43
Identities = 48/273 (17%), Positives = 90/273 (32%), Gaps = 30/273 (10%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL---ECVDK 403
+ + I + G+ L I +D G+Y + G+ + + L +
Sbjct: 44 DEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKEL 101
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
K L+ + +T +LKV W HNG I + +RVK
Sbjct: 102 MMEVCKKIALSATDLKIQSTAEGIQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVT 160
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWN---------------------NFIFIPPFPIFIFH 502
+ + I +D G+YV ++ F + I +
Sbjct: 161 GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKN 220
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF-GF 561
+ R+ D + + E ++ C DP + W N + A+ ++
Sbjct: 221 RARVLGGLPDVVTIQEGKALNLTCN--VWGDPPPEVSWLKNEKALASDDHCNLKFEAGRT 278
Query: 562 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 594
++ V DSG+Y NK+G+ + V
Sbjct: 279 AYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 311
Score = 148 bits (376), Expect = 2e-39
Identities = 42/313 (13%), Positives = 77/313 (24%), Gaps = 67/313 (21%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P F ++ + + +C + E + W+ + + I + G
Sbjct: 7 GPHFVEYLSWE--VTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHDFKD--GIC 61
Query: 468 VMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVP 517
+ I D+G Y ++ + + S + +
Sbjct: 62 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQST 121
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY 577
G + ++++W NG RVKT I L ++ D G+Y
Sbjct: 122 AEGIQLYSFV--TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKY 179
Query: 578 ICRATNKWGTAMTKAKVI------------------------------------------ 595
+ + +
Sbjct: 180 VMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKA 239
Query: 596 ----CKVL---TVIVEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRAT 647
C V V W N K L F I +SG Y
Sbjct: 240 LNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 299
Query: 648 NKYGSDVTKASLK 660
NKYGS+ + ++
Sbjct: 300 NKYGSETSDFTVS 312
Score = 146 bits (370), Expect = 2e-38
Identities = 52/333 (15%), Positives = 86/333 (25%), Gaps = 64/333 (19%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
F P F+ +L+ E NV C+V K E + W+ +
Sbjct: 4 PFTGPHFVEYLSW-EVTGECNVLLKCKVANIK------------------KETHIVWYKD 44
Query: 165 GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNN------------------ 206
+ I + G + I D+G Y + +
Sbjct: 45 EREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVI--LKDDRGKDKSRLKLVDEAFKE 100
Query: 207 ---KPLPAGAKFKTTHDFGYVALDIELMLKTLV----PFTEWFVNNKPLPAGAKFKTTHD 259
+ A T A I+L W N + + KT
Sbjct: 101 LMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVT 160
Query: 260 FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL-------------ERLFVNHN 306
+ L I D G Y ++ + K + L + N
Sbjct: 161 GEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKN 220
Query: 307 YPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR-TVHAFGM 365
+ + EG+ + + GD V +L N K + + A
Sbjct: 221 RARVLGGLPDVVTIQEGKALNLTCN--VWGDPPPEVSWLKNEKALASDDHCNLKFEAGRT 278
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
I G D+G Y NK+G +
Sbjct: 279 AYFTINGVSTADSGKYGLVVKNKYGSETSDFTV 311
Score = 145 bits (368), Expect = 3e-38
Identities = 54/327 (16%), Positives = 86/327 (26%), Gaps = 82/327 (25%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
I W+K+ +S+ + F G+ TL I D+ IY + G+ S
Sbjct: 33 IKKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSR 90
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
L E + +
Sbjct: 91 LKLVDEAF------------------------------------KELMMEVCKKIALSAT 114
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
++ E G L + +LKV W HNG I + +RVK +
Sbjct: 115 DLKIQSTAE---------GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIW 165
Query: 185 MDIAYVQSHDSGEYVCQ-----------------------WFVNNKPLPAGAKFKTTHDF 221
+ I +D G+YV + A A+
Sbjct: 166 LQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL 225
Query: 222 GYVALDIELMLKTLVPFT-----------EWFVNNKPLPAGAKFKTTHDF-GYVALDIVG 269
G + + + + T W N K L + + I G
Sbjct: 226 GGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTING 285
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLK 296
DSG Y + N GS T+ T+
Sbjct: 286 VSTADSGKYGLVVKNKYGSETSDFTVS 312
Score = 144 bits (365), Expect = 6e-38
Identities = 44/351 (12%), Positives = 92/351 (26%), Gaps = 77/351 (21%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
+ P FV + ++ + +C++A + W+ + + + + + +
Sbjct: 3 DPFTGPHFVEYL--SWEVTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHD--FK 57
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
G + +D+G Y + G D++R L ++ E
Sbjct: 58 DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMME------------- 104
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPAR-FCTRVTGYPRPRVMWLI 1598
+ +S + + E + + +V W
Sbjct: 105 --------------------VCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSH 144
Query: 1599 NGHTIVNEIVRKITATETT--------EMEHKGK-------------------------- 1624
NG I K T KGK
Sbjct: 145 NGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEA 204
Query: 1625 ---IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPIT 1681
Q A + + V E GDP P + W + + +
Sbjct: 205 YAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALA 264
Query: 1682 SSPDFQIHTFSTK-SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
S + + + + + V DSG + ++ +N+ G + V
Sbjct: 265 SDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 315
Score = 138 bits (349), Expect = 8e-36
Identities = 38/270 (14%), Positives = 80/270 (29%), Gaps = 45/270 (16%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
P F+ + E +C++ + + W+ + + +S + + G
Sbjct: 6 TGPHFVEYLSWEVTGECN-VLLKCKVANIKKET-HIVWYKDEREISVDEKHDFKD--GIC 61
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
L I + +D+G+Y + G+ + KL + + + +E
Sbjct: 62 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVC--------------- 106
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
+ S + G + ++++W NG
Sbjct: 107 ------------------KKIALSATDLKIQSTAEGIQLYSFV--TYYVEDLKVNWSHNG 146
Query: 1095 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVT 1154
RVKT I L ++ D G+Y+ + + +A +
Sbjct: 147 SAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYA 206
Query: 1155 ESQ------LPDSMSAEKLKELEKNYTPEE 1178
E Q + + A L L T +E
Sbjct: 207 EFQRLKQAAIAEKNRARVLGGLPDVVTIQE 236
Score = 126 bits (319), Expect = 8e-32
Identities = 50/345 (14%), Positives = 86/345 (24%), Gaps = 83/345 (24%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
P P F+ E S V V + +V + + ++ IS
Sbjct: 4 PFTGPHFV-EYLSWEVTGECNVLLKCKVAN-IKKETHIV------WYKDEREISVD---- 51
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
F G +L I +D G Y +D G+ ++ + + +
Sbjct: 52 ---------EKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELM 102
Query: 1381 LQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM 1440
+ +
Sbjct: 103 ----------------------------------------MEVCKKIALSATDLKIQSTA 122
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
+ + ++KV W NG + + +R + + P D G+Y+
Sbjct: 123 EGIQLYSF-VTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVM 181
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
+ + L E Q K EK R
Sbjct: 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR-------------------- 221
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
A V P+ +QEG+ V G P P V WL N + +
Sbjct: 222 -ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAS 265
Score = 126 bits (317), Expect = 1e-31
Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 35/199 (17%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
+LK+ W NG + R+++ + L IN +D Y + +
Sbjct: 132 TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ 191
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
T L + +A + L++ K+ V + V +E
Sbjct: 192 KTVDLSGQA---------YDEAYAEFQRLKQAAIAEKNRA------RVLGGLPDVVTIQE 236
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF-G 181
+ ++ C V G DP +V W N K + + + +
Sbjct: 237 GKALNLTCNVW---------G----------DPPPEVSWLKNEKALASDDHCNLKFEAGR 277
Query: 182 FVVMDIAYVQSHDSGEYVC 200
I V + DSG+Y
Sbjct: 278 TAYFTINGVSTADSGKYGL 296
Score = 112 bits (281), Expect = 8e-27
Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 37/211 (17%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ W+ + +++ ++ GI L I ++++G+YE + G D ++ L
Sbjct: 39 IVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV-- 94
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ ++ + + +++
Sbjct: 95 ---------------------DEAFKE-----------LMMEVCKKIALSATDLKIQSTA 122
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
E + +T LKV W NG ++ R +T + L+I+ P D G+Y
Sbjct: 123 EGIQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVM 181
Query: 783 RAYNDYGEAVTSASMKVQGKRSIILESQLPK 813
++ + + Q E Q K
Sbjct: 182 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLK 212
Score = 102 bits (256), Expect = 2e-23
Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 58/265 (21%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPF---------IN 1312
E + E+ A ++ ++ E +++ ++ I
Sbjct: 96 EAFKELMMEVCKKIALSATDLKIQSTAEG-----IQLYSFVTYYVEDLKVNWSHNGSAIR 150
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
S + L I+ P D+G+YV ++ +S
Sbjct: 151 YSDRVKT-------------GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 197
Query: 1373 CKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIK 1432
+ + Q K E K R + +
Sbjct: 198 GQAYDEAYAEFQRLKQAAIAE----------------------------KNRARVLGGLP 229
Query: 1433 TQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF-GYVAMNFGWVY 1491
+ E ++ C GDP +V W N K L + N ++ V
Sbjct: 230 DVVTIQEGKALNLTCN--VWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVS 287
Query: 1492 PEDSGEYLCRATNLYGMDETRAILK 1516
DSG+Y N YG + + +
Sbjct: 288 TADSGKYGLVVKNKYGSETSDFTVS 312
Score = 101 bits (254), Expect = 3e-23
Identities = 49/345 (14%), Positives = 97/345 (28%), Gaps = 54/345 (15%)
Query: 1048 EEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY 1107
+ P F L +V V C++ I W+ + R + + +
Sbjct: 2 IDPFTGPHFVEYLSW--EVTGECNVLLKCKVAN-IKKETHIVWYKDEREISVDEKHD--F 56
Query: 1108 DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKL 1167
G +L + +D+G Y + G ++ K++ +A +++ E ++SA L
Sbjct: 57 KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDL 116
Query: 1168 KELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--DSELSEYQKERANES----- 1220
K + E ++N W S + + + +
Sbjct: 117 KIQSTAEGIQLYSFVTYYVEDLKVN-----------WSHNGSAIRYSDRVKTGVTGEQIW 165
Query: 1221 ---TELEKHD----------IVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRF 1267
E +D T Q +S + E + +
Sbjct: 166 LQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVL 225
Query: 1268 ITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAV 1327
+ VT+QE + + V DP V + + +
Sbjct: 226 GGLPDVVTIQEGKALNLTCNVWG--DPPPEVSWLKNEK----ALASDDHCNLK------- 272
Query: 1328 IFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
I+ V D G+Y N +G + T+S
Sbjct: 273 -----FEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 312
Score = 70.7 bits (173), Expect = 7e-13
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDF-GLVTLSINSLRADDSAIYTCKATNLLG 59
DP ++ W KN L+ F+ +IN + DS Y N G
Sbjct: 244 CNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG 303
Query: 60 EAVSTCTLKI 69
S T+ +
Sbjct: 304 SETSDFTVSV 313
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus}
SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Length = 382
Score = 188 bits (479), Expect = 3e-52
Identities = 90/451 (19%), Positives = 139/451 (30%), Gaps = 106/451 (23%)
Query: 1421 KKQPPRFVTQIK--TQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
+ P F Q + + C+ +P W +NG L
Sbjct: 1 RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRAR--ANPPATYRWKMNGTEL------KMGP 52
Query: 1479 DFGYVAMN-----FGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKG 1532
D Y + V +D+G Y C ATN G +R A L+
Sbjct: 53 DSRYRLVAGDLVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQ----------- 101
Query: 1533 MKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPR 1591
+ + K+ EG F C+ YP
Sbjct: 102 ------------------------------EFSAEERDPVKITEGWGVMFTCSPPPHYPA 131
Query: 1592 PRVMWLINGHT-IVNEIVRKITATET-------TEMEHKGK------------------- 1624
WL+N + R+ + T TE G
Sbjct: 132 LSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSK 191
Query: 1625 -IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS 1683
Q + + P + K A E G+P+P IKW + D TS
Sbjct: 192 FSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTS- 250
Query: 1684 PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPP 1743
S++ +L ++ V ED G + AEN G+ +++ P
Sbjct: 251 -----KWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA----------QP 295
Query: 1744 SFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLII 1803
+L I+ ++G R+ S V WL++G+ + R + L
Sbjct: 296 DWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEV--SGG--ELRFS 351
Query: 1804 EAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
+ V+EDSG Y+CVA N G AEL VQ+
Sbjct: 352 KLVLEDSGMYQCVAENKHGTVYASAELTVQA 382
Score = 145 bits (367), Expect = 2e-37
Identities = 74/453 (16%), Positives = 121/453 (26%), Gaps = 127/453 (28%)
Query: 405 KGQPPKFTSHIKSLEGLKD--GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS 462
+ P F + + C +P W NG + +
Sbjct: 1 RSYGPVFEEQPAHTLFPEGSAEEKVTLTCRARA--NPPATYRWKMNGTELKMGPDSRYRL 58
Query: 463 DFGFVVMDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRLPSPS 510
G +V+ V++ D+G Y C A N F F+ F
Sbjct: 59 VAGDLVI-SNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSA----------EE 107
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP--FATGSRVKTVYDFGFISLDMDY 568
+D + + E V F C P P + W N P R G +L +
Sbjct: 108 RDPVKITEGWGVMFTCSP-PPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG--NLYIAK 164
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVICKVLTV--------------------------- 601
A D G Y C AT+ L++
Sbjct: 165 TEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQM 224
Query: 602 -------------IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
++W + + I ++ E+ G YEC A N
Sbjct: 225 VTLECFAFGNPVPQIKWRKLDGSQT---SKWLSSEPLLHIQNVD---FEDEGTYECEAEN 278
Query: 649 KYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPV 708
G D + + I P
Sbjct: 279 IKGRDTYQGRII-------IHA-----------------------------------QPD 296
Query: 709 FTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILE 768
+ +++ + G + + + P+ V W +G+P+ + +R L
Sbjct: 297 WLDVITDTE-ADIGSDLRWSCV--ASGKPRPAVRWLRDGQPLASQNRIEVSGGE----LR 349
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
S + ED G Y C A N +G SA + VQ
Sbjct: 350 FSKLVLEDSGMYQCVAENKHGTVYASAELTVQA 382
Score = 144 bits (365), Expect = 4e-37
Identities = 71/370 (19%), Positives = 119/370 (32%), Gaps = 68/370 (18%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA--- 392
+ T + NG ++ R G +V+ K +D G Y C ATN G
Sbjct: 33 ANPPATYRWKMNGTELKMGPDSRYRLVAGDLVI-SNPVKAKDAGSYQCVATNARGTVVSR 91
Query: 393 EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
E S+ G +F++ + + +G F C+ P + P L W N P
Sbjct: 92 EASLRF-------GFLQEFSAEERDPVKITEGWGVMFTCSP-PPHYPALSYRWLLNEFPN 143
Query: 453 F--HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF------IFIPPFPIFIFHQI 504
F R + G + IA ++ D G Y C A ++ +F + + +
Sbjct: 144 FIPADGRRFVSQTTG--NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAED 201
Query: 505 ------RLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 558
+ + + V +C +P +I W +
Sbjct: 202 ARQYAPSIKAKFPADTYALTGQMVTLEC--FAFGNPVPQIKWRKLDGSQTSKWLSSE--- 256
Query: 559 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI----------------------- 595
L + V D G Y C A N G + ++I
Sbjct: 257 ---PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLR 313
Query: 596 --CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
C V W +G+ L +R + ++ E+SG+Y+C A NK+
Sbjct: 314 WSCVASGKPRPAVRWLRDGQPLASQNRIEVSGG-ELRFSKLV---LEDSGMYQCVAENKH 369
Query: 651 GSDVTKASLK 660
G+ A L
Sbjct: 370 GTVYASAELT 379
Score = 143 bits (361), Expect = 1e-36
Identities = 58/346 (16%), Positives = 91/346 (26%), Gaps = 50/346 (14%)
Query: 1562 APVFVSQPEAQKVQEG---EPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITAT--- 1614
PVF QP EG E C R P W +NG + +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTC-RARANPPATYRWKMNGTELKMGPDSRYRLVAGD 62
Query: 1615 ----ETTEMEHKGKIQ---------ERVVDASEKPAKPPVFTKK-IQPCRAFEQDQARFE 1660
+ + G Q +AS + F+ + P + E F
Sbjct: 63 LVISNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWGVMFT 122
Query: 1661 VEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 1719
P + +W +FP D + T L + + D G ++ A +
Sbjct: 123 CSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHID 182
Query: 1720 KAKCSANLVVEEKRQGGRGGV--VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWL 1777
S + P + GQ+ + + W
Sbjct: 183 FITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 242
Query: 1778 KNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKA 1837
K + L I ED G YEC A N G + +++
Sbjct: 243 KLDGSQTSKWL----SSEP--LLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIH---- 292
Query: 1838 PGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + D GS + C +GKPR
Sbjct: 293 ---------------AQPDWLDVITDTEADIGSDLRWSCVASGKPR 323
Score = 139 bits (353), Expect = 1e-35
Identities = 89/428 (20%), Positives = 120/428 (28%), Gaps = 108/428 (25%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSI-NSLRADDSAIYTCKATNLLGE 60
RA+P W NG L +G R G L I N ++A D+ Y C ATN G
Sbjct: 30 RARANPPATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCVATNARGT 87
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
VS SLR L + V+
Sbjct: 88 VVSR------------EASLRFGFLQ----------------------EFSAEERDPVKI 113
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIF--HKNRVKMVS 178
E V F C P P L W N P F R +
Sbjct: 114 TEGWGVMFTCSPPPH------------------YPALSYRWLLNEFPNFIPADGRRFVSQ 155
Query: 179 DFGFVVMDIAYVQSHDSGEYVCQ-----------WFVNNKPLPAGAK---------FKTT 218
G + IA ++ D G Y C F L A+
Sbjct: 156 TTG--NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKF 213
Query: 219 HDFGYVALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAE 273
Y + L+ P +W + + L I E
Sbjct: 214 PADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPL------LHIQNVDFE 267
Query: 274 DSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EAS 331
D G Y +A N KG T G + + P + G + AS
Sbjct: 268 DEGTYECEAENIKGRDTYQGRIIIHAQ-------PDWLDVITDTE-ADIGSDLRWSCVAS 319
Query: 332 LIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 391
G V +L +G+P+ + +RI L +ED+G+Y C A NK G
Sbjct: 320 ----GKPRPAVRWLRDGQPLASQNRIEVSGG----ELRFSKLVLEDSGMYQCVAENKHGT 371
Query: 392 AEISVNLE 399
S L
Sbjct: 372 VYASAELT 379
Score = 138 bits (350), Expect = 3e-35
Identities = 75/489 (15%), Positives = 123/489 (25%), Gaps = 133/489 (27%)
Query: 1264 PPRFITEIESVTVQEA---EPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINISTAF 1317
P F + E E V R L + ++
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDL 63
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
+I N V +D G Y C A N G ++
Sbjct: 64 VISNP-----------------------VKAKDAGSYQCVATNARGTVVSR--------- 91
Query: 1378 TIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQL 1437
L+ F + + ++
Sbjct: 92 EASLRFGFL--------------------------------------QEFSAEERDPVKI 113
Query: 1438 VEMQSTKFECQLAPVGDPNMKVEWFLNGKP--LPHKNRFNPIYDFGYVAMNFGWVYPEDS 1495
E F C P P + W LN P +P R G + D
Sbjct: 114 TEGWGVMFTCS-PPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG--NLYIAKTEASDL 170
Query: 1496 GEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVE 1555
G Y C AT+ K + E
Sbjct: 171 GNYSCFATSHIDFITKSVFSKFSQLS------------------------------LAAE 200
Query: 1556 DEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVR----- 1609
D + + P G+ C G P P++ W + ++ +
Sbjct: 201 DARQYAPSIKAKFPADTYALTGQMVTLEC-FAFGNPVPQIKWRKLDGSQTSKWLSSEPLL 259
Query: 1610 KITATETTEMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEV 1661
I + E +G E + + P + I A R+
Sbjct: 260 HIQNVD---FEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSC 316
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
G P P ++W R+ P+ S ++ + L ++ +EDSG++ +AEN+ G
Sbjct: 317 VASGKPRPAVRWLRDGQPLASQNRIEV----SGGELRFSKLVLEDSGMYQCVAENKHGTV 372
Query: 1722 KCSANLVVE 1730
SA L V+
Sbjct: 373 YASAELTVQ 381
Score = 136 bits (345), Expect = 1e-34
Identities = 80/488 (16%), Positives = 124/488 (25%), Gaps = 152/488 (31%)
Query: 705 QAPVFTVPLSNIDDLR--EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCD 761
PVF ++ E R P W NG +K G R
Sbjct: 3 YGPVFEEQPAHTLFPEGSAEEKVTLTCRARAN--PPATYRWKMNGTELKMGPDSRYRLVA 60
Query: 762 FGFVILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ---------- 810
VI +PV +D G Y C A N G V+ AS++ + E +
Sbjct: 61 GDLVI--SNPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKITEGWG 118
Query: 811 --------------------------LPKGMEVFISFHE----ISPVYPEDCGQYSCRAY 840
+P F+S I+ D G YSC A
Sbjct: 119 VMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFAT 178
Query: 841 NDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEG 900
+ S K +++
Sbjct: 179 SHIDFITKSVFSKFSQLSLAAEDARQYA-------------------------------- 206
Query: 901 YGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALS 960
P D + EC +P ++W
Sbjct: 207 ---------------PSIKAKFPADTYALTGQMVTLECF--AFGNPVPQIKWRKLD---- 245
Query: 961 AGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQV 1020
GS+ + L I +V D G Y C+A N G T ++ +
Sbjct: 246 -GSQTSKWLSSEPL-LHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA---------- 293
Query: 1021 SAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEP 1080
P + + D + + + C
Sbjct: 294 --------------------------------QPDWLDVITD-TEADIGSDLRWSC--VA 318
Query: 1081 KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT 1140
P + W +G+P A+ +R++ L + DSG Y C A NK GT
Sbjct: 319 SGKPRPAVRWLRDGQPLASQNRIEVSGG----ELRFSKLVLEDSGMYQCVAENKHGTVYA 374
Query: 1141 KAKVICKA 1148
A++ +A
Sbjct: 375 SAELTVQA 382
Score = 133 bits (335), Expect = 3e-33
Identities = 75/412 (18%), Positives = 122/412 (29%), Gaps = 81/412 (19%)
Query: 109 PVFISHLNDV---ECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
PVF E E V CR + P W NG
Sbjct: 5 PVFEEQPAHTLFPEGSAEEKVTLTCRARAN-------------------PPATYRWKMNG 45
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKF--KTTHDFGY 223
+ + G +V+ V++ D+G Y C N G + + FG+
Sbjct: 46 TELKMGPDSRYRLVAGDLVI-SNPVKAKDAGSYQC--VATN---ARGTVVSREASLRFGF 99
Query: 224 VALDIELMLKTLV-------------------PFTEWFVNNKP--LPAGAKFKTTHDFGY 262
+ + W +N P +PA + + G
Sbjct: 100 LQEFSAEERDPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTG- 158
Query: 263 VALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHN----YPLFSLQFQHLS 318
L I A D G Y+ AT+ T S K + + P +F +
Sbjct: 159 -NLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADT 217
Query: 319 NLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIE 376
G++ E A G+ +++ + + + L I E
Sbjct: 218 YALTGQMVTLECFAF----GNPVPQIKWRKLDGS-----QTSKWLSSEPL-LHIQNVDFE 267
Query: 377 DTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPV 436
D G Y C A N G+ + P + I E G + C +
Sbjct: 268 DEGTYECEAENIKGRDTYQGRIIIHA-----QPDWLDVITDTE-ADIGSDLRWSCVAS-- 319
Query: 437 NDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
P V W +G+P+ +NR+++ + + + DSG Y C A N
Sbjct: 320 GKPRPAVRWLRDGQPLASQNRIEVSGG----ELRFSKLVLEDSGMYQCVAEN 367
Score = 130 bits (329), Expect = 2e-32
Identities = 75/376 (19%), Positives = 125/376 (33%), Gaps = 52/376 (13%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIV-GAYAEDSGIYTVKATNSKGSATTSGTL 295
W +N L G + G L I A+D+G Y ATN++G+ +
Sbjct: 37 ATYRWKMNGTELKMGPDSRYRLVAG--DLVISNPVKAKDAGSYQCVATNARGTVVSR--- 91
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
E FS + + ++EG F S P ++ +L N P
Sbjct: 92 ---EASLRFGFLQEFSAEERDPVKITEGWGVMFTCS-PPPHYPALSYRWLLNEFPNFIPA 147
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE------CVDKSKGQPP 409
R + L I T+ D G Y+C AT+ SV + + ++ P
Sbjct: 148 DGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAP 207
Query: 410 KFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 468
+ + G EC +P +++W K +S +
Sbjct: 208 SIKAKFPADTYALTGQMVTLEC---FAFGNPVPQIKWRKLDGSQ----TSKWLSSEP--L 258
Query: 469 MDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPE 518
+ I V D G Y C A N I P + + + + + +
Sbjct: 259 LHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPD--W----LDVIT----DTEADI 308
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 578
+ + C P + W +G+P A+ +R++ L + DSG Y
Sbjct: 309 GSDLRWSC--VASGKPRPAVRWLRDGQPLASQNRIEVSGG----ELRFSKLVLEDSGMYQ 362
Query: 579 CRATNKWGTAMTKAKV 594
C A NK GT A++
Sbjct: 363 CVAENKHGTVYASAEL 378
Score = 116 bits (293), Expect = 8e-28
Identities = 72/432 (16%), Positives = 114/432 (26%), Gaps = 126/432 (29%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P+F P+ + E KV C +++P W NG G +
Sbjct: 5 PVFEEQ----PAHTLFPEGSAE-EKVTLTC--RARANPPATYRWKMNGTELKMGPDSRYR 57
Query: 557 YDFG--FISLDMDYVYARDSGEYICRATNKWGTAMT-KAKVI------------------ 595
G IS + V A+D+G Y C ATN GT ++ +A +
Sbjct: 58 LVAGDLVIS---NPVKAKDAGSYQCVATNARGTVVSREASLRFGFLQEFSAEERDPVKIT 114
Query: 596 --------CKVL----TVIVEWFYNGKKLP---HGHRYRTFHDFGIVILDILYCYEENSG 640
C + W N G R+ + + I + G
Sbjct: 115 EGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTE---ASDLG 171
Query: 641 VYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETAD 700
Y C AT+ + + A+
Sbjct: 172 NYSCFATSHIDFITKSVFS-------------------------------KFSQLSLAAE 200
Query: 701 IEHRQAPVFTVPLSNIDDLREGENAHFE--ARLTPTDDPKLKVEWFWNGKPMKTGSRFRT 758
+ AP G+ E A +P +++W +
Sbjct: 201 DARQYAPSIKAKFPADTYALTGQMVTLECFA----FGNPVPQIKWRKLDGSQTSKWLSSE 256
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII--LESQ-LPKGM 815
+L I V ED G Y C A N G + + + + + G
Sbjct: 257 P------LLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGS 310
Query: 816 EVFIS-------------FHE------------------ISPVYPEDCGQYSCRAYNDYG 844
++ S + S + ED G Y C A N +G
Sbjct: 311 DLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHG 370
Query: 845 EAVTSASMKVQG 856
SA + VQ
Sbjct: 371 TVYASAELTVQA 382
Score = 88.8 bits (220), Expect = 2e-18
Identities = 58/344 (16%), Positives = 84/344 (24%), Gaps = 95/344 (27%)
Query: 586 GTAMTKAKVICKVL---TVIVEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGV 641
G+A K + C+ W NG +L G R +VI + + +++G
Sbjct: 19 GSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYRLVAGDLVISNPVK--AKDAGS 76
Query: 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADI 701
Y+C ATN G+ V++ A LR +
Sbjct: 77 YQCVATNARGTVVSRE---------------------------------ASLRFGFLQEF 103
Query: 702 EHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCD 761
+ + EG F P P L W N P + R F
Sbjct: 104 SAEERDPVKI--------TEGWGVMFTCSP-PPHYPALSYRWLLNEFPNFIPADGRRFVS 154
Query: 762 FGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR------------------ 803
L I+ D G YSC A + S K
Sbjct: 155 QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFP 214
Query: 804 ---------SIILE-----------------SQLPKGMEVFISFHEISPVYPEDCGQYSC 837
+ LE I V ED G Y C
Sbjct: 215 ADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYEC 274
Query: 838 RAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
A N G + + + + + E I
Sbjct: 275 EAENIKGRDTYQGRIIIHAQPDWL---DVITDTEADIGSDLRWS 315
Score = 63.7 bits (155), Expect = 3e-10
Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P + W ++G PL+ +RI + L + L +DS +Y C A N G ++
Sbjct: 321 KPRPAVRWLRDGQPLASQNRIEVSGG----ELRFSKLVLEDSGMYQCVAENKHGTVYASA 376
Query: 66 TLKIE 70
L ++
Sbjct: 377 ELTVQ 381
Score = 45.2 bits (107), Expect = 1e-04
Identities = 18/126 (14%), Positives = 27/126 (21%), Gaps = 53/126 (42%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----------DPRLRVECSLSTAF 1306
P ++ I +R+ P V R+ V
Sbjct: 292 HAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGG----- 346
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
L + ED G Y C A N HG +
Sbjct: 347 ---------------------------------ELRFSKLVLEDSGMYQCVAENKHGTVY 373
Query: 1367 TKATIS 1372
A ++
Sbjct: 374 ASAELT 379
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein,
serine/threonine-protein KI LIMB-girdle muscular
dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB:
2j8o_A 2ill_A
Length = 197
Score = 176 bits (448), Expect = 2e-50
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 8/200 (4%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI-TSSPDFQIHTFST-K 1694
A P F ++++ Q A + G P P +KW+R+ I ++I F
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVI 1754
LI+ V +D+ V+ V A N+GG +A+L VE + + P L + +
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAK-----IHLPKTLEGMGAVHA 116
Query: 1755 NVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVV-EDSGAY 1813
G++ S + W K I + Y+ + + +L+ V +D+G Y
Sbjct: 117 LRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY 176
Query: 1814 ECVAMNNAGEARCEAELVVQ 1833
A N G + EL V
Sbjct: 177 VVCAKNRFGIDQKTVELDVA 196
Score = 141 bits (358), Expect = 3e-38
Identities = 40/235 (17%), Positives = 71/235 (30%), Gaps = 45/235 (19%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF-- 971
AP F +L + + A C++T P V+W+ GK + A I +F
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKG 59
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNI 1031
G+ L I V D+ +Y +ATN+ G + + L V+
Sbjct: 60 GYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVP-------------------- 99
Query: 1032 QKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
K + P + + V P I W
Sbjct: 100 -----------------AKIHLPKTLEGMGA-VHALRGEVVSIKIP--FSGKPDPVITWQ 139
Query: 1092 FNGRPFATGSRVKTVYD-FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ + + + V +D+G Y+ A N++G ++
Sbjct: 140 KGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194
Score = 134 bits (339), Expect = 8e-36
Identities = 40/196 (20%), Positives = 71/196 (36%), Gaps = 26/196 (13%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIV-NEIVRKITATET--- 1616
AP F + V+ A +VTG+P+P V W G I+ + + +I +
Sbjct: 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYH 62
Query: 1617 ------TEMEHKGKIQ--------------ERVVDASEKPAKPPVFTKKIQPCRAFEQDQ 1656
+ Q V+ K P + + A +
Sbjct: 63 QLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI-HLPKTLEGMGAVHALRGEV 121
Query: 1657 ARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF-STKSILIMRQVFMEDSGVFAVIAE 1715
++ F G P P I W + I ++ +Q+ S S++ V +D+G + V A+
Sbjct: 122 VSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAK 181
Query: 1716 NRGGKAKCSANLVVEE 1731
NR G + + L V +
Sbjct: 182 NRFGIDQKTVELDVAD 197
Score = 123 bits (310), Expect = 7e-32
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD-IRYK-TLEEDN 1796
G + P F + + + A K++ V W + GK+II D ++Y+ +
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
L+I +D+ Y+ A N G A L V+ A+ P
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVP--------------AKIHLPK 106
Query: 1857 VAEPLKDQNVKEGSAVTLKCRITGKPR 1883
E + + G V++K +GKP
Sbjct: 107 TLEGMGAVHALRGEVVSIKIPFSGKPD 133
Score = 114 bits (287), Expect = 9e-29
Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 27/205 (13%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF- 464
P F +++L ++ +A C +T P+ V+W+ GK I + +F
Sbjct: 2 AMAPHFKEELRNLN-VRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFK 58
Query: 465 -GFVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQD- 512
G+ + IA V D+ Y RA N + +P +I LP +
Sbjct: 59 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPA-------KIHLPKTLEGM 111
Query: 513 -NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD-FGFISLDMDYVY 570
+ V P I W + + + + V
Sbjct: 112 GAVHALRGEVVSIKIP--FSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVE 169
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI 595
+D+G Y+ A N++G ++
Sbjct: 170 RKDAGFYVVCAKNRFGIDQKTVELD 194
Score = 114 bits (286), Expect = 1e-28
Identities = 38/186 (20%), Positives = 66/186 (35%), Gaps = 9/186 (4%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGM 365
P F + ++L+ + A + G V++ GK I A G
Sbjct: 5 PHFKEELRNLN-VRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L I +D VY RATN+ G + +LE +K PK + ++ G+
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVH-ALRGE 120
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVC 484
+ P+ + W I + +++ ++ V+ D+G YV
Sbjct: 121 VVSIKI--PFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVV 178
Query: 485 RAWNNF 490
A N F
Sbjct: 179 CAKNRF 184
Score = 110 bits (277), Expect = 1e-27
Identities = 45/305 (14%), Positives = 76/305 (24%), Gaps = 113/305 (37%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
AP F L N++ +R NA ++T PK V+W+ GK +
Sbjct: 4 APHFKEELRNLN-VRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGL---------- 50
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEIS 825
+ I E G I I+
Sbjct: 51 -------------------------------------KYRIQEF--KGGYHQLI----IA 67
Query: 826 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGH 885
V +D Y RA N G + A L
Sbjct: 68 SVTDDDATVYQVRATNQGGSVSGT----------------------------ASL----- 94
Query: 886 EREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTND 945
++ A++ P+ L + + + +
Sbjct: 95 -----EVEVPAKIH----------------LPKTLEGMGAVHALRGEVVSIKIP--FSGK 131
Query: 946 PSMTVEWFHNGKALSAGSRIKTIND-FGFVILEINDVYLRDSGLYTCKATNKHGEATTSC 1004
P + W + + I ++ N V +D+G Y A N+ G +
Sbjct: 132 PDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTV 191
Query: 1005 KLTVK 1009
+L V
Sbjct: 192 ELDVA 196
Score = 105 bits (264), Expect = 1e-25
Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 46/211 (21%)
Query: 596 CKVL---TVIVEWFYNGKKL-PHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKY 650
CKV IV+W+ GK++ G +YR G L I ++++ VY+ RATN+
Sbjct: 26 CKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQG 85
Query: 651 GSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFT 710
GS ASL+ + P
Sbjct: 86 GSVSGTASLE-------VEVP------------------------------AKIHLPKTL 108
Query: 711 VPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCD-FGFVILEI 769
+ + GE + + P + W + ++ ++
Sbjct: 109 EGMGAVH-ALRGEVVSIKIP--FSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFP 165
Query: 770 SPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ V +D G Y A N +G + + V
Sbjct: 166 NGVERKDAGFYVVCAKNRFGIDQKTVELDVA 196
Score = 105 bits (264), Expect = 1e-25
Identities = 33/199 (16%), Positives = 57/199 (28%), Gaps = 53/199 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGSR--IRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
P ++W++ G + F G L I S+ DD+ +Y +ATN G
Sbjct: 31 HPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSG 90
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
T +L++E K P + + V
Sbjct: 91 TASLEVE---------------------VPAKIHL----------PKTLEGMGAVHALRG 119
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD-FGF 182
E V GK P+ + W I + +++
Sbjct: 120 EVVSIKIPFS---------GK----------PDPVITWQKGQDLIDNNGHYQVIVTRSFT 160
Query: 183 VVMDIAYVQSHDSGEYVCQ 201
++ V+ D+G YV
Sbjct: 161 SLVFPNGVERKDAGFYVVC 179
Score = 99.4 bits (248), Expect = 1e-23
Identities = 36/195 (18%), Positives = 57/195 (29%), Gaps = 42/195 (21%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF--G 1481
P F +++ + + C++ G P V+W+ GK + I +F G
Sbjct: 4 APHFKEELRNL-NVRYQSNATLVCKV--TGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
Y + V +D+ Y RATN G A L+
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLE------------------------- 95
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGH 1601
VE P + A GE +G P P + W
Sbjct: 96 ------------VEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQD 143
Query: 1602 TIVNEIVRKITATET 1616
I N ++ T +
Sbjct: 144 LIDNNGHYQVIVTRS 158
Score = 97.1 bits (242), Expect = 9e-23
Identities = 36/271 (13%), Positives = 69/271 (25%), Gaps = 96/271 (35%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV----EPRV------------DPRLRVECSLSTA 1305
P F E+ ++ V+ +V +P V + R++
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQ------ 55
Query: 1306 FFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
F G+ L I V +D Y RA N G
Sbjct: 56 ---------------------------EFKGGYHQLIIASVTDDDATVYQVRATNQGGSV 88
Query: 1366 FTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPP 1425
A++ ++ P K P
Sbjct: 89 SGTASL------EVE-------------------------------------VPAKIHLP 105
Query: 1426 RFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD-FGYVA 1484
+ + + + + + G P+ + W + + + I
Sbjct: 106 KTLEGMGAV-HALRGEVVSIKIP--FSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSL 162
Query: 1485 MNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ V +D+G Y+ A N +G+D+ L
Sbjct: 163 VFPNGVERKDAGFYVVCAKNRFGIDQKTVEL 193
Score = 92.9 bits (231), Expect = 2e-21
Identities = 38/220 (17%), Positives = 64/220 (29%), Gaps = 62/220 (28%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
+P F L ++ + N C+V G P+ V+W+ GK
Sbjct: 4 APHFKEELRNLNVRYQSNATLVCKVT---------GH----------PKPIVKWYRQGKE 44
Query: 168 IFHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVA 225
I + +F G+ + IA V D+ Y N+ G+ T
Sbjct: 45 IIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV--RATNQ---GGSVSGTAS------ 93
Query: 226 LDIELMLKTLVP-FTE----------------------------WFVNNKPLPAGAKFKT 256
L++E+ K +P E W + ++
Sbjct: 94 LEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQV 153
Query: 257 THD-FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ G +D+G Y V A N G + L
Sbjct: 154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVEL 193
Score = 92.1 bits (229), Expect = 4e-21
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 14/169 (8%)
Query: 237 PFTEWFVNNKPL-PAGAKFK-TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
P +W+ K + G K++ GY L I +D+ +Y V+ATN GS + + +
Sbjct: 34 PIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTAS 93
Query: 295 LKCLERLFVNHNYPLFSLQF-QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPI 351
L+ V + + + + + GE+ + G + + I
Sbjct: 94 LE------VEVPAKIHLPKTLEGMGAVHALRGEVVSIKIP--FSGKPDPVITWQKGQDLI 145
Query: 352 EASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ + + V ++ G + +D G Y A N++G + +V L+
Sbjct: 146 DNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194
Score = 91.3 bits (227), Expect = 1e-20
Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 38/183 (20%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVK-TVYDFGFISLDMDYVY 570
NL+V C++ P + W+ G+ A G + + + G+ L + V
Sbjct: 13 NLNVRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVT 70
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI------------------------------CKVL- 599
D+ Y RATN+ G+ A +
Sbjct: 71 DDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG 130
Query: 600 --TVIVEWFYNGKKLPHGHRYRTFHD-FGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
++ W + + Y+ ++ +++G Y A N++G D
Sbjct: 131 KPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190
Query: 657 ASL 659
L
Sbjct: 191 VEL 193
Score = 69.7 bits (171), Expect = 3e-13
Identities = 13/72 (18%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFD-FGLVTLSINSLRADDSAIYTCKATNLLG 59
+ P+ I W K + + + N + D+ Y A N G
Sbjct: 126 IPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFG 185
Query: 60 EAVSTCTLKIED 71
T L + D
Sbjct: 186 IDQKTVELDVAD 197
Score = 69.4 bits (170), Expect = 3e-13
Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 5/103 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVK-TVYDFG 1110
P F +L++ L+V C++ P + W+ G+ A G + + + G
Sbjct: 4 APHFKEELRN-LNVRYQSNATLVCKVT--GHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIV 1153
+ L + V D+ Y RATN+ G+ A + + I
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIH 103
Score = 48.9 bits (117), Expect = 3e-06
Identities = 15/127 (11%), Positives = 29/127 (22%), Gaps = 48/127 (37%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTA 1305
P+ + + +V E V + +P + + +V + S
Sbjct: 101 KIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRS-- 158
Query: 1306 FFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ + V +D G YV A N G
Sbjct: 159 -------------------------------FTSLVFPNGVERKDAGFYVVCAKNRFGID 187
Query: 1366 FTKATIS 1372
+
Sbjct: 188 QKTVELD 194
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG
B3P; 2.60A {Homo sapiens}
Length = 304
Score = 179 bits (456), Expect = 3e-50
Identities = 66/305 (21%), Positives = 103/305 (33%), Gaps = 39/305 (12%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRK------ 1610
E +E P F+ +P+ Q G A F + TG P+PRV W G + ++
Sbjct: 1 ETGEEPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDES 60
Query: 1611 ------ITATETTEME---------HKGKIQER----VVDASEKPAKPPVFTKKIQPCRA 1651
I T E G+I V+ + P+ P Q
Sbjct: 61 AGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVV 120
Query: 1652 FEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 1711
A G+P P I WF++ P+ S L + D G +
Sbjct: 121 ERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYE 180
Query: 1712 VIAENRGG-KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK 1770
+A N G + ANL V + V P F S I G +
Sbjct: 181 CVATNSAGVRYSSPANLYVRVQN-------VAPRFSILPMSHEIMPGGNVNITCVAVGSP 233
Query: 1771 PLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAEL 1830
V W++ + + P+ + ++ V+DS Y CVAM++ G A++
Sbjct: 234 MPYVKWMQGAEDLTPEDDMP------VGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQI 287
Query: 1831 VVQSK 1835
V+S
Sbjct: 288 TVKSL 292
Score = 171 bits (434), Expect = 3e-47
Identities = 54/249 (21%), Positives = 86/249 (34%), Gaps = 22/249 (8%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF--STKS 1695
+PP F K+ + A F + GDP P + W ++ + S I +
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAV 64
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
+ I D V+ +A+N G+ A L V + Q G P+ V+
Sbjct: 65 LRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSG---FPNIDMGPQLKVVE 121
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
+ A S ++ W K+ + P +++ L I + D G YEC
Sbjct: 122 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 181
Query: 1816 VAMNNAGEA-RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTL 1874
VA N+AG A L V+ Q+ AP + + G V +
Sbjct: 182 VATNSAGVRYSSPANLYVR----------------VQNVAPRFSILPMSHEIMPGGNVNI 225
Query: 1875 KCRITGKPR 1883
C G P
Sbjct: 226 TCVAVGSPM 234
Score = 154 bits (391), Expect = 2e-41
Identities = 60/333 (18%), Positives = 102/333 (30%), Gaps = 66/333 (19%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
++PPRF+ + K Q V F CQ GDP +V W GK + + +D
Sbjct: 4 EEPPRFIKEPKDQI-GVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDES 60
Query: 1482 YVA--MNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
A P D Y C A N G A L
Sbjct: 61 AGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTV---------------------- 98
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLIN 1599
L ED+ P P P+ + V+ A +G P P + W +
Sbjct: 99 -------------LREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKD 145
Query: 1600 GHTI----VNEIVRKITAT----ETTEMEHKGK-----------IQERVVDASEK-PAKP 1639
+ N ++++ + E++E +GK + +
Sbjct: 146 FLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVA 205
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 1699
P F+ G P+P +KW + +T D + ++
Sbjct: 206 PRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGR------NVL 259
Query: 1700 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
++DS + +A + G + A + V+
Sbjct: 260 ELTDVKDSANYTCVAMSSLGVIEAVAQITVKSL 292
Score = 141 bits (358), Expect = 4e-37
Identities = 49/257 (19%), Positives = 85/257 (33%), Gaps = 15/257 (5%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVA-LDIVGA-YAEDSGIYTVKATNSKGSATTSG 293
P W K + + D A L I D +Y A NS G T
Sbjct: 35 KPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHA 94
Query: 294 TLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA 353
L L + +P + Q L + A + G+ + + + P++
Sbjct: 95 KLTVLREDQLPSGFPNIDMGPQ-LKVVERTRTATMLCA--ASGNPDPEITWFKDFLPVDP 151
Query: 354 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
S + L+I ++ D G Y C ATN G S + + P+F+
Sbjct: 152 SASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY-SSPANLYVRVQNVAPRFSI 210
Query: 414 HIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY 473
S E + G + + C V P V+W + + ++ + + + +
Sbjct: 211 LPMSHE-IMPGGNVNITC--VAVGSPMPYVKWMQGAEDLTPEDDMPVGRNV------LEL 261
Query: 474 VQSHDSGEYVCRAWNNF 490
DS Y C A ++
Sbjct: 262 TDVKDSANYTCVAMSSL 278
Score = 138 bits (350), Expect = 5e-36
Identities = 52/304 (17%), Positives = 96/304 (31%), Gaps = 22/304 (7%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMV- 366
P F + + G +A F GD V + GK + +
Sbjct: 7 PRFIKEPKDQI-GVSGGVASFVCQA--TGDPKPRVTWNKKGKKVNSQRFETIEFDESAGA 63
Query: 367 VLEILGTKI-EDTGVYTCRATNKWGQAEISVNL--ECVDKSKGQPPKFTSHIKSLEGLKD 423
VL I + D VY C A N G+ + L D+ P + ++
Sbjct: 64 VLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKV-VER 122
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
+A C + +P+ ++ WF + P+ + + I + D G+Y
Sbjct: 123 TRTATMLCAASG--NPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYE 180
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPS----QDNLDVPEAGKVHFDCRLEPKSDPTMRID 539
C A N+ P ++ +++ +P + ++ G V+ C P +
Sbjct: 181 CVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCV--AVGSPMPYVK 238
Query: 540 WFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVL 599
W + ++ +DS Y C A + G A++ K L
Sbjct: 239 WMQGAEDLTPEDDMP------VGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSL 292
Query: 600 TVIV 603
Sbjct: 293 PKAG 296
Score = 126 bits (317), Expect = 1e-31
Identities = 46/325 (14%), Positives = 75/325 (23%), Gaps = 104/325 (32%)
Query: 823 EISPV-YPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
I P+ P D Y C A N GE A + V + +
Sbjct: 66 RIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLP-------------------- 105
Query: 882 GYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLT 941
P P + + A C
Sbjct: 106 --------------------------------SGFPNIDMGPQLKVVERTRTATMLCA-- 131
Query: 942 PTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEA- 1000
+ +P + WF + + + I L+I D G Y C ATN G
Sbjct: 132 ASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY 191
Query: 1001 TTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQL 1060
++ L V+ + P F+
Sbjct: 192 SSPANLYVR---------------------------------------VQNVAPRFSILP 212
Query: 1061 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 1120
++ G V+ C P + W + ++
Sbjct: 213 MS-HEIMPGGNVNITCV--AVGSPMPYVKWMQGAEDLTPEDDMP------VGRNVLELTD 263
Query: 1121 ARDSGEYICRATNKWGTAMTKAKVI 1145
+DS Y C A + G A++
Sbjct: 264 VKDSANYTCVAMSSLGVIEAVAQIT 288
Score = 126 bits (317), Expect = 1e-31
Identities = 50/331 (15%), Positives = 81/331 (24%), Gaps = 86/331 (25%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY--DFGFISLDMDYVY 570
+ G F C+ DP R+ W G+ + + G +
Sbjct: 15 DQIGVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRT 72
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI-----------------CKVLTVI----------- 602
RD Y C A N G AK+ ++ V
Sbjct: 73 PRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAA 132
Query: 603 -------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
+ WF + + L I E + G YEC ATN G +
Sbjct: 133 SGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYS 192
Query: 656 KASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSN 715
S NL + AP F++ +
Sbjct: 193 -------SPANLYVR-------------------------------VQNVAPRFSILPMS 214
Query: 716 IDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPE 775
+ + G N + P V+W + + + +
Sbjct: 215 HE-IMPGGNVNITCV--AVGSPMPYVKWMQGAEDLTPEDDMP------VGRNVLELTDVK 265
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQGKRSII 806
D Y+C A + G A + V+
Sbjct: 266 DSANYTCVAMSSLGVIEAVAQITVKSLPKAG 296
Score = 118 bits (296), Expect = 6e-29
Identities = 49/314 (15%), Positives = 80/314 (25%), Gaps = 83/314 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLR-ADDSAIYTCKATNLLGEAVS 63
DP ++ W K G ++ F + L I LR D +Y C A N +GE
Sbjct: 33 DPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITV 92
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
L + E +L P +
Sbjct: 93 HAKLTV-----------------------------LREDQLPSGFPNIDMGPQLKVVERT 123
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
C G P+ ++ WF + P+ +
Sbjct: 124 RTATMLCAAS---------GN----------PDPEITWFKDFLPVDPSASNGRIKQLRSG 164
Query: 184 VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT-----------HDFGYVALDIELML 232
+ I + D G+Y C N AG ++ + F + + E+M
Sbjct: 165 ALQIESSEETDQGKYEC--VATNS---AGVRYSSPANLYVRVQNVAPRFSILPMSHEIMP 219
Query: 233 KTLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVK 281
V T +W + L + +DS YT
Sbjct: 220 GGNVNITCVAVGSPMPYVKWMQGAEDLTPEDDMPVGR------NVLELTDVKDSANYTCV 273
Query: 282 ATNSKGSATTSGTL 295
A +S G +
Sbjct: 274 AMSSLGVIEAVAQI 287
Score = 116 bits (293), Expect = 2e-28
Identities = 49/230 (21%), Positives = 71/230 (30%), Gaps = 42/230 (18%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK-TINDFGF 973
+ P F+ P D +A F C+ T DP V W GK +++ ++
Sbjct: 5 EPPRFIKEPKDQIGVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDESAG 62
Query: 974 VILEINDVYL-RDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
+L I + RD +Y C A N GE T KLTV
Sbjct: 63 AVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTV------------------------ 98
Query: 1033 KLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF 1092
L D+ P Q V C +P I WF
Sbjct: 99 -----------LREDQLPSGFPNIDMGPQL-KVVERTRTATMLCA--ASGNPDPEITWFK 144
Query: 1093 NGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
+ P + + +L ++ D G+Y C ATN G +
Sbjct: 145 DFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSP 194
Score = 116 bits (292), Expect = 2e-28
Identities = 56/297 (18%), Positives = 91/297 (30%), Gaps = 58/297 (19%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+PP+F K G+ G A F C T DP+ +V W GK + + + D
Sbjct: 5 EPPRFIKEPKDQIGVS-GGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDESA 61
Query: 467 V-VMDIAYVQSH-DSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNL 514
V+ I +++ D Y C A N+ + F I + P
Sbjct: 62 GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMG-PQ--LK 118
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS 574
V C +P I WF + P + + +L ++ D
Sbjct: 119 VVERTRTATMLCA--ASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQ 176
Query: 575 GEYICRATNKWGTAMTK-AKVICKVLTV-------------------------------I 602
G+Y C ATN G + A + +V V
Sbjct: 177 GKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPY 236
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
V+W + L + + D+ ++S Y C A + G A +
Sbjct: 237 VKWMQGAEDLTPEDDMP-VGRNVLELTDV-----KDSANYTCVAMSSLGVIEAVAQI 287
Score = 115 bits (290), Expect = 5e-28
Identities = 62/333 (18%), Positives = 100/333 (30%), Gaps = 70/333 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P FI D F C+ G DP+ +V W GK +
Sbjct: 7 PRFIKEPKDQIGVSGGVASFVCQAT---------G----------DPKPRVTWNKKGKKV 47
Query: 169 FHKNRVKMVSDFGFV-VMDIAYVQSH-DSGEYVCQWFVNNKPLPAGAKFKTTH------- 219
+ + D V+ I +++ D Y C N G
Sbjct: 48 NSQRFETIEFDESAGAVLRIQPLRTPRDENVYEC--VAQN---SVGEITVHAKLTVLRED 102
Query: 220 DFGYVALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFG 261
+I++ + V P WF + P+ A
Sbjct: 103 QLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLR 162
Query: 262 YVALDIVGAYAEDSGIYTVKATNSKGSA-TTSGTLKCLERLFVNHNYPLFSLQFQHLSNL 320
AL I + D G Y ATNS G ++ L + V + P FS+ +
Sbjct: 163 SGALQIESSEETDQGKYECVATNSAGVRYSSPANLY----VRVQNVAPRFSILPMSHE-I 217
Query: 321 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 380
G + + VG V+++ + + + G VLE+ T ++D+
Sbjct: 218 MPGGNVNITC--VAVGSPMPYVKWMQGAEDLTPEDDMP----VGRNVLEL--TDVKDSAN 269
Query: 381 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
YTC A + G E + PK +
Sbjct: 270 YTCVAMSSLGVIEAVAQITVKS-----LPKAGT 297
Score = 107 bits (268), Expect = 3e-25
Identities = 48/297 (16%), Positives = 83/297 (27%), Gaps = 76/297 (25%)
Query: 603 VEWFYNGKKLPHGHRYR-TFHDFGIVILDIL-YCYEENSGVYECRATNKYGSDVTKASLK 660
V W GKK+ F + +L I + VYEC A N G A L
Sbjct: 38 VTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKL- 96
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
++ E QLP G P + +
Sbjct: 97 -----TVLREDQLPSG-----------------------------FPNIDMGPQLKV-VE 121
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
A + +P ++ WF + P+ + L+I D G+Y
Sbjct: 122 RTRTATMLCA--ASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179
Query: 781 SCRAYNDYGEAVTS-ASMKVQGKR------------------SIILE------------- 808
C A N G +S A++ V+ + ++ +
Sbjct: 180 ECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKW 239
Query: 809 ----SQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 861
L ++ + + + +D Y+C A + G A + V+
Sbjct: 240 MQGAEDLTPEDDMPVGRNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKAG 296
Score = 105 bits (263), Expect = 1e-24
Identities = 63/353 (17%), Positives = 96/353 (27%), Gaps = 115/353 (32%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLR-----VECSLSTAFFFPFINIS 1314
EEPPRFI E + F + P+ PR+ + + F +
Sbjct: 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPK--PRVTWNKKGKKVNSQRFETIEFDESA 61
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
A L I L P D+ Y C A N GE A +
Sbjct: 62 GAVLR-------------IQPLRT---------PRDENVYECVAQNSVGEITVHAKL--- 96
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
T+ ++Q+P G P Q
Sbjct: 97 ---TVLREDQLPSG-----------------------------------FPNIDMGP--Q 116
Query: 1435 DQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPE 1493
++VE ++ C A G+P+ ++ WF + P+ I A+
Sbjct: 117 LKVVERTRTATMLC--AASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEET 174
Query: 1494 DSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQL 1553
D G+Y C ATN G+ + L
Sbjct: 175 DQGKYECVATNSAGVRYSSPA-------------------------------------NL 197
Query: 1554 VEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
+ AP F P + ++ G G P P V W+ + E
Sbjct: 198 YVRVQN-VAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPE 249
Score = 83.7 bits (207), Expect = 3e-17
Identities = 33/201 (16%), Positives = 52/201 (25%), Gaps = 59/201 (29%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+P+ +I WFK+ +P+ + L I S D Y C ATN G
Sbjct: 131 AASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVR 190
Query: 62 VS-TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
S L +R + P F E
Sbjct: 191 YSSPANLY-----------VRVQNVA----------------------PRFSILPMSHEI 217
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
NV+ C V P V+W + + ++ + + +
Sbjct: 218 MPGGNVNITCVA-------------------VGSPMPYVKWMQGAEDLTPEDDMPVGRNV 258
Query: 181 GFVVMDIAYVQSHDSGEYVCQ 201
+ DS Y C
Sbjct: 259 ------LELTDVKDSANYTCV 273
Score = 81.8 bits (202), Expect = 1e-16
Identities = 41/272 (15%), Positives = 68/272 (25%), Gaps = 78/272 (28%)
Query: 1256 EEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPR---LRVECSLSTAFFFPFIN 1312
ED++P P + V+ DP + + + I
Sbjct: 100 REDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIK 159
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
L +L I+ DQG+Y C A N G ++
Sbjct: 160 Q----------------------LRSGALQIESSEETDQGKYECVATNSAGVRYSSPA-- 195
Query: 1373 CKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIK 1432
+LY + PRF
Sbjct: 196 ------------------------------------------NLYVRVQNVAPRFSILPM 213
Query: 1433 TQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYP 1492
+ +++ + C VG P V+W + L ++ V
Sbjct: 214 SH-EIMPGGNVNITCV--AVGSPMPYVKWMQGAEDLTPEDDMP---VGRNVLEL---TDV 264
Query: 1493 EDSGEYLCRATNLYGMDETRAILKTTGKPGII 1524
+DS Y C A + G+ E A + P
Sbjct: 265 KDSANYTCVAMSSLGVIEAVAQITVKSLPKAG 296
Score = 77.2 bits (190), Expect = 4e-15
Identities = 41/203 (20%), Positives = 61/203 (30%), Gaps = 51/203 (25%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDFG 763
+ P F + G A F + T DPK +V W GK + + F +
Sbjct: 5 EPPRFIKEPKDQI-GVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDESA 61
Query: 764 FVILEISPV-YPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE----SQLPK----- 813
+L I P+ P D Y C A N GE A + V + + P+
Sbjct: 62 GAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVE 121
Query: 814 ------------------------GMEVFISFHE------------ISPVYPEDCGQYSC 837
+ V S I D G+Y C
Sbjct: 122 RTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYEC 181
Query: 838 RAYNDYGEAVTS-ASMKVQGKRS 859
A N G +S A++ V+ +
Sbjct: 182 VATNSAGVRYSSPANLYVRVQNV 204
Score = 65.2 bits (159), Expect = 5e-11
Identities = 22/95 (23%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY--DFG 1110
PP F + +D G F C+ DP R+ W G+ + + G
Sbjct: 6 PPRFIKEPKD-QIGVSGGVASFVCQAT--GDPKPRVTWNKKGKKVNSQRFETIEFDESAG 62
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ RD Y C A N G AK+
Sbjct: 63 AVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLT 97
Score = 61.4 bits (149), Expect = 7e-10
Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 6/71 (8%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P ++W + L+ + + + DSA YTC A + LG
Sbjct: 228 VAVGSPMPYVKWMQGAEDLTPEDDMP------VGRNVLELTDVKDSANYTCVAMSSLGVI 281
Query: 62 VSTCTLKIEDR 72
+ + ++
Sbjct: 282 EAVAQITVKSL 292
Score = 44.8 bits (106), Expect = 2e-04
Identities = 17/127 (13%), Positives = 30/127 (23%), Gaps = 27/127 (21%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLI 1319
+ PRF S + V P V+
Sbjct: 201 VQNVAPRFSILPMSHEIMPGGNVNITCVAV--GSPMPYVKWMQGAE-------------- 244
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP-- 1377
+ +G ++ +D Y C A + G A I+ K +P
Sbjct: 245 -------DLTPEDDMPVG--RNVLELTDVKDSANYTCVAMSSLGVIEAVAQITVKSLPKA 295
Query: 1378 TIQLQNQ 1384
+ +
Sbjct: 296 GTKHHHH 302
Score = 39.8 bits (93), Expect = 0.006
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+E P + KDQ G + C+ TG P+
Sbjct: 4 EEPPRFIKEPKDQIGVSGGVASFVCQATGDPK 35
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI
cardiomyopathy, disease mutation, disulfide bond,
immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Length = 197
Score = 175 bits (446), Expect = 4e-50
Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 14/203 (6%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
+ P K+++ + A+ + G PLP IKW+R + S +++ +
Sbjct: 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHT 64
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSF---LTTISSAV 1753
L + ED GV+ IA N G+ + S+ L+++ P F
Sbjct: 65 LTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQA----------TPQFHPGYPLKEKYY 114
Query: 1754 INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVE-DSGA 1812
VG R + W K + ++ L++ + +G
Sbjct: 115 GAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGK 174
Query: 1813 YECVAMNNAGEARCEAELVVQSK 1835
Y+ N G ++ +Q K
Sbjct: 175 YKVQLSNVFGTVDAILDVEIQDK 197
Score = 144 bits (366), Expect = 2e-39
Identities = 43/239 (17%), Positives = 71/239 (29%), Gaps = 49/239 (20%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G+AP D+T A C++ P ++W+ GK L + K +D
Sbjct: 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L + D G+YTC ATN+ GE TS KL ++
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQA----------------------- 99
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTS--QLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
P F L++ + P + WF
Sbjct: 100 -------------------TPQFHPGYPLKEKYYGAVGSTLRLHVM--YIGRPVPAMTWF 138
Query: 1092 FNGRPFATGSRVKTVYDFGFISLD-MDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
+ + + L + +G+Y + +N +GT V + K
Sbjct: 139 HGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197
Score = 126 bits (318), Expect = 5e-33
Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 23/201 (11%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
G+ P +K + K G++A C + P ++W+ GK + + KM SD
Sbjct: 5 GEAPGIRKEMKDVT-TKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGR 61
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLD 515
+ + + D G Y C A N + P Q P ++
Sbjct: 62 THTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATP-------QFHPGYPLKEKYY 114
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLD-MDYVYARDS 574
+ P + WF + + + L + +
Sbjct: 115 GAVGSTLRLHVM--YIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHA 172
Query: 575 GEYICRATNKWGTAMTKAKVI 595
G+Y + +N +GT V
Sbjct: 173 GKYKVQLSNVFGTVDAILDVE 193
Score = 123 bits (311), Expect = 4e-32
Identities = 37/192 (19%), Positives = 69/192 (35%), Gaps = 20/192 (10%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET---- 1616
EAP + + + GE A+ ++ G P P + W G ++ K+++
Sbjct: 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTL 65
Query: 1617 ----TEMEHKGKIQ---ERVVDASEKPAK-----PPVFTKKI---QPCRAFEQDQARFEV 1661
E E +G V E +K P F + R V
Sbjct: 66 TVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHV 125
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFME-DSGVFAVIAENRGGK 1720
+ G P+P + WF + +S + I + L+M+ V + +G + V N G
Sbjct: 126 MYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGT 185
Query: 1721 AKCSANLVVEEK 1732
++ +++K
Sbjct: 186 VDAILDVEIQDK 197
Score = 120 bits (303), Expect = 5e-31
Identities = 32/148 (21%), Positives = 55/148 (37%), Gaps = 19/148 (12%)
Query: 1739 GVV---PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEED 1795
G + P + +G+ A+ +I D+ W + GK++I +YK +
Sbjct: 1 GAMSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDG 60
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAP 1855
TL ++ ED G Y C+A N GE ++L++Q+ P P
Sbjct: 61 RTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQAT--PQFHPGYP---------- 108
Query: 1856 TVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ GS + L G+P
Sbjct: 109 ----LKEKYYGAVGSTLRLHVMYIGRPV 132
Score = 114 bits (286), Expect = 1e-28
Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 13/186 (6%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P + + ++ GE A + VG +++ GK + S + +
Sbjct: 8 PGIRKEMKDVT-TKLGEAAQLSCQI--VGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHT 64
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGL--KDGD 425
L ++ + ED GVYTC ATN+ G+ E S L + P+F E G
Sbjct: 65 LTVMTEEQEDEGVYTCIATNEVGEVETSSKLL-LQ----ATPQFHPGYPLKEKYYGAVGS 119
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSH-DSGEYVC 484
+ P + WFH K + + + + + + + + VQ +G+Y
Sbjct: 120 TLRLHVMYI--GRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKV 177
Query: 485 RAWNNF 490
+ N F
Sbjct: 178 QLSNVF 183
Score = 108 bits (271), Expect = 1e-26
Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 45/195 (23%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+AP + ++ + GE A ++ P ++W+ GK + +++ D
Sbjct: 6 EAPGIRKEMKDVT-TKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRT 62
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEV------- 817
L + ED G Y+C A N+ GE TS+ + +Q L +
Sbjct: 63 HTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLR 122
Query: 818 ----------------------------FISFHE-------ISPVYPEDCGQYSCRAYND 842
I E + G+Y + N
Sbjct: 123 LHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNV 182
Query: 843 YGEAVTSASMKVQGK 857
+G +++Q K
Sbjct: 183 FGTVDAILDVEIQDK 197
Score = 105 bits (264), Expect = 9e-26
Identities = 35/171 (20%), Positives = 60/171 (35%), Gaps = 12/171 (7%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+P +W+ K L K+K + D L ++ ED G+YT ATN G TS L
Sbjct: 36 LPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKL 95
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA 353
P F + G +G + + + K ++
Sbjct: 96 LLQAT-------PQFHPGYPLKEKYYGAVGSTLRLHVM--YIGRPVPAMTWFHGQKLLQN 146
Query: 354 SHRIRTVHAFGMVVLEILG-TKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
S I + L + + G Y + +N +G + +++E DK
Sbjct: 147 SENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197
Score = 104 bits (262), Expect = 2e-25
Identities = 33/203 (16%), Positives = 58/203 (28%), Gaps = 47/203 (23%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
++W+ GK+L +Y+ D L ++ +E+ GVY C ATN+ G T + L
Sbjct: 39 IKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLL-- 96
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL--R 720
+ P F +
Sbjct: 97 -----LQA-----------------------------------TPQFHPGYPLKEKYYGA 116
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPV-YPEDCGQ 779
G P + WF K ++ + L + V G+
Sbjct: 117 VGSTLRLHVM--YIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGK 174
Query: 780 YSCRAYNDYGEAVTSASMKVQGK 802
Y + N +G +++Q K
Sbjct: 175 YKVQLSNVFGTVDAILDVEIQDK 197
Score = 103 bits (258), Expect = 6e-25
Identities = 30/197 (15%), Positives = 61/197 (30%), Gaps = 53/197 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P I+W++ G L + + + D TL++ + +D +YTC ATN +GE ++
Sbjct: 34 RPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSS 93
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
L ++ P+ +
Sbjct: 94 KLLLQ---------------------ATPQFHPGYPLK------------EKYYGAVGST 120
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
+ G+ P + WFH K + + + + + + +
Sbjct: 121 LRLHVMYI---------GR----------PVPAMTWFHGQKLLQNSENITIENTEHYTHL 161
Query: 186 DIAYVQSH-DSGEYVCQ 201
+ VQ +G+Y Q
Sbjct: 162 VMKNVQRKTHAGKYKVQ 178
Score = 102 bits (255), Expect = 1e-24
Identities = 37/211 (17%), Positives = 62/211 (29%), Gaps = 40/211 (18%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + DV K E C++ G P ++W+ GK +
Sbjct: 8 PGIRKEMKDVTTKLGEAAQLSCQIV---------G----------RPLPDIKWYRFGKEL 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK-------------PLPAGAKF 215
+ KM SD + + + D G Y C N+ P
Sbjct: 49 IQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCI--ATNEVGEVETSSKLLLQATPQFHPG 106
Query: 216 KTTHDFGYVALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGA 270
+ Y A+ L L + P WF K L + Y L +
Sbjct: 107 YPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNV 166
Query: 271 -YAEDSGIYTVKATNSKGSATTSGTLKCLER 300
+G Y V+ +N G+ ++ ++
Sbjct: 167 QRKTHAGKYKVQLSNVFGTVDAILDVEIQDK 197
Score = 101 bits (253), Expect = 3e-24
Identities = 27/180 (15%), Positives = 56/180 (31%), Gaps = 34/180 (18%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
++ C++ P I W+ G+ + K D +L +
Sbjct: 16 DVTTKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQE 73
Query: 573 DSGEYICRATNKWGTAMTKAKVI----------------------------CKVL---TV 601
D G Y C ATN+ G T +K++ +
Sbjct: 74 DEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVP 133
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYC-YEENSGVYECRATNKYGSDVTKASLK 660
+ WF+ K L + + L + + ++G Y+ + +N +G+ ++
Sbjct: 134 AMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVE 193
Score = 98.6 bits (246), Expect = 3e-23
Identities = 34/184 (18%), Positives = 53/184 (28%), Gaps = 44/184 (23%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
+ P ++ +D ++ ++ + CQ+ VG P ++W+ GK L ++ D
Sbjct: 6 EAPGIRKEM--KDVTTKLGEAAQLSCQI--VGRPLPDIKWYRFGKELIQSRKYKMSSDGR 61
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
+ ED G Y C ATN G ET + L P L
Sbjct: 62 THTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPL------------ 109
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGH 1601
E G R G P P + W
Sbjct: 110 ---------------------------KEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQK 142
Query: 1602 TIVN 1605
+ N
Sbjct: 143 LLQN 146
Score = 89.4 bits (222), Expect = 4e-20
Identities = 34/275 (12%), Positives = 71/275 (25%), Gaps = 102/275 (37%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----------DPRLRVECSLST 1304
+ E P E++ VT + E + ++ P + + ++
Sbjct: 3 MSGEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKM------ 56
Query: 1305 AFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
D +L + ED+G Y C A N+ GE
Sbjct: 57 ----------------------------SSDGRTHTLTVMTEEQEDEGVYTCIATNEVGE 88
Query: 1365 AFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQP 1424
T + + +Q
Sbjct: 89 VETSSKL------LLQ------------------------------------------AT 100
Query: 1425 PRFVTQIKTQDQL--VEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P+F +++ + + +G P + WF K L + Y
Sbjct: 101 PQFHPGYPLKEKYYGAVGSTLRLHVM--YIGRPVPAMTWFHGQKLLQNSENITIENTEHY 158
Query: 1483 VAMNFGWV-YPEDSGEYLCRATNLYGMDETRAILK 1516
+ V +G+Y + +N++G + ++
Sbjct: 159 THLVMKNVQRKTHAGKYKVQLSNVFGTVDAILDVE 193
Score = 85.5 bits (212), Expect = 8e-19
Identities = 26/193 (13%), Positives = 49/193 (25%), Gaps = 65/193 (33%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
+ ED G Y+C A N+ G ++ ++L
Sbjct: 66 TVMTEEQEDEGVYTCIATNEV----------------------------GEVETSSKL-- 95
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEF---LTTPTDLTLAESTLAHFECR 939
++ P+F A +
Sbjct: 96 -------------------------LLQA----TPQFHPGYPLKEKYYGAVGSTLRLHVM 126
Query: 940 LTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLR-DSGLYTCKATNKHG 998
P + WFH K L I N + L + +V + +G Y + +N G
Sbjct: 127 --YIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFG 184
Query: 999 EATTSCKLTVKGR 1011
+ ++ +
Sbjct: 185 TVDAILDVEIQDK 197
Score = 84.0 bits (208), Expect = 3e-18
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 3/114 (2%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P +++D + C++ P I W+ G+ + K D
Sbjct: 7 APGIRKEMKD-VTTKLGEAAQLSCQIV--GRPLPDIKWYRFGKELIQSRKYKMSSDGRTH 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEK 1166
+L + D G Y C ATN+ G T +K++ +A L +
Sbjct: 64 TLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAV 117
Score = 72.4 bits (178), Expect = 3e-14
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSI-NSLRADDSAIYTCKATNLLG 59
V P + WF L I L + N R + Y + +N+ G
Sbjct: 125 VMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFG 184
Query: 60 EAVSTCTLKIEDR 72
+ ++I+D+
Sbjct: 185 TVDAILDVEIQDK 197
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-
like; 2.50A {Homo sapiens}
Length = 312
Score = 175 bits (446), Expect = 9e-49
Identities = 43/251 (17%), Positives = 79/251 (31%), Gaps = 7/251 (2%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
P + + FE + P W ++ SP ++ + K+
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTK 59
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGG--VVPPSFLTTISSAVI 1754
+ + + M+D G+++ + G A E KR P + + + I
Sbjct: 60 MTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEI 119
Query: 1755 NVGQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYKTL--EEDNLFTLLIIEAVVEDSG 1811
RF + V ++ N K+I +YK + + + + ED G
Sbjct: 120 LEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG 179
Query: 1812 AYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSA 1871
Y + LV K K+A + + P E L + V
Sbjct: 180 TYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE-VTGECN 238
Query: 1872 VTLKCRITGKP 1882
V LKC++
Sbjct: 239 VLLKCKVANIK 249
Score = 169 bits (428), Expect = 2e-46
Identities = 48/315 (15%), Positives = 102/315 (32%), Gaps = 45/315 (14%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT--- 1617
P F P+ W + + + ++ +
Sbjct: 2 IDPFTKEVVVNVDDDGVISLNFECDK-MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKM 60
Query: 1618 -----EMEHKGKIQ--------------------ERVVDASEKPAKPPVFTKKIQPCRAF 1652
M+ G +R++ S + P V K
Sbjct: 61 TFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEIL 120
Query: 1653 EQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI--LIMRQVFMEDSGV 1709
E+ Q RF ++ + + + I P +++H I + M ++ ED G
Sbjct: 121 EKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGT 180
Query: 1710 FAVIAENRGGKAKCSANLVVEEKRQGGRGGV---------VPPSFLTTISSAVINVGQLA 1760
+ ++ + LV + ++ + P F+ +S V
Sbjct: 181 YTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVT-GECNV 239
Query: 1761 RFDAKISATKP-LDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMN 1819
K++ K + W K+ ++I D ++ +D + TLLI E +D+G YE + +
Sbjct: 240 LLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKD 297
Query: 1820 NAGEARCEAELVVQS 1834
+ G+ + +LV ++
Sbjct: 298 DRGKDKSRLKLVDEA 312
Score = 156 bits (395), Expect = 7e-42
Identities = 46/352 (13%), Positives = 103/352 (29%), Gaps = 84/352 (23%)
Query: 493 IPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR 552
I PF ++ N+D ++F+C P W + R
Sbjct: 2 IDPF----TKEV------VVNVDDDGVISLNFECDK---MTPKSEFSWSKDYVSTEDSPR 48
Query: 553 VKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT---------------------- 590
++ + + D G Y C T+ G A +
Sbjct: 49 LEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPT 108
Query: 591 ---------------KAKVICKVLTVI----VEWFYNGKKLPHGHRYRTFHDF--GIVIL 629
+ + + + V + +N K++ G +Y+ D GI+ +
Sbjct: 109 VPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEM 168
Query: 630 DILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLED 689
+ +E+ G Y + + ++ + L L E++
Sbjct: 169 FMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEF---------------- 212
Query: 690 AAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKP 749
+ + +Q P F LS ++ N + ++ + + W+ + +
Sbjct: 213 -------QRQEWIRKQGPHFVEYLS--WEVTGECNVLLKCKVA-NIKKETHIVWYKDERE 262
Query: 750 MKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
+ + G L I+ +D G Y +D G+ + + +
Sbjct: 263 ISVDEKHDF--KDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 312
Score = 152 bits (384), Expect = 2e-40
Identities = 39/271 (14%), Positives = 86/271 (31%), Gaps = 26/271 (9%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT----L 295
W + + + + +D GIY+ T++ G A++ L
Sbjct: 35 SWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEEL 94
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS- 354
K L L H +P ++ + + E F V +++N K I
Sbjct: 95 KRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQ-AEKLSGNAKVNYIFNEKEIFEGP 153
Query: 355 -HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL--------------E 399
+++ G++ + + + ED G YT + + +V L +
Sbjct: 154 KYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQ 213
Query: 400 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 459
+ + Q P F ++ + + +C + E + W+ + + I +
Sbjct: 214 RQEWIRKQGPHFVEYLSWE--VTGECNVLLKCKVA-NIKKETHIVWYKDEREISVDEKHD 270
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ I D+G Y ++
Sbjct: 271 FKDGIC--TLLITEFSKKDAGIYEVILKDDR 299
Score = 151 bits (382), Expect = 3e-40
Identities = 50/302 (16%), Positives = 90/302 (29%), Gaps = 35/302 (11%)
Query: 321 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 380
+FE + + E S R+ + ++D G+
Sbjct: 16 DGVISLNFEC---DKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGI 72
Query: 381 YTCRATNKWGQAEISVNLECVDK-------SKGQPPKFTSHIKSLEGLKDGDSAHFECTL 433
Y+C T+ G A + E K P ++E L+ G +
Sbjct: 73 YSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQ-- 130
Query: 434 TPVNDPELKVEWFHNGKPIFHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCRAWNNF- 490
KV + N K IF + KM D G + M + +Q D G Y + +
Sbjct: 131 AEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKA 190
Query: 491 --------------IFIPPFPIFIFHQIRLPSP---SQDNLDVPEAGKVHFDCRLEPKSD 533
IR P + +V V C++
Sbjct: 191 TNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKK 250
Query: 534 PTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAK 593
T I W+ + R + + + G +L + +D+G Y + G ++ K
Sbjct: 251 ET-HIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307
Query: 594 VI 595
++
Sbjct: 308 LV 309
Score = 150 bits (381), Expect = 4e-40
Identities = 52/445 (11%), Positives = 116/445 (26%), Gaps = 137/445 (30%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P + N+DD + +FE PK + W + + R
Sbjct: 3 DPFTKEVVVNVDD-DGVISLNFECDKM---TPKSEFSWSKDYVSTEDSPRLE-------- 50
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEIS 825
++ +G ++ +
Sbjct: 51 -------------------------------VESKGNKTKM----------------TFK 63
Query: 826 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGH 885
+ +D G YSC + G A + + + KR +
Sbjct: 64 DLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLL------------------------- 98
Query: 886 EREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTND 945
+ + + + + + E F +
Sbjct: 99 ----------------------ALSHEHKFPTVPVKSELAVEILEKGQVRFWMQ-AEKLS 135
Query: 946 PSMTVEWFHNGKALSAGSRIK--TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ V + N K + G + K + G + + + + D G YT + + ++
Sbjct: 136 GNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 195
Query: 1004 CKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDN 1063
L + + E + + + P F L +
Sbjct: 196 VVLVGDVFKKLQKEAEFQR-----------------------QEWIRKQGPHFVEYL--S 230
Query: 1064 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARD 1123
+V V C++ T I W+ + R + + + G +L + +D
Sbjct: 231 WEVTGECNVLLKCKVANIKKET-HIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKD 287
Query: 1124 SGEYICRATNKWGTAMTKAKVICKA 1148
+G Y + G ++ K++ +A
Sbjct: 288 AGIYEVILKDDRGKDKSRLKLVDEA 312
Score = 147 bits (373), Expect = 5e-39
Identities = 50/315 (15%), Positives = 104/315 (33%), Gaps = 68/315 (21%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
G P + +++ S +FEC P+ + W + R+++ S
Sbjct: 1 GIDPFTKEVVVNVD-DDGVISLNFEC---DKMTPKSEFSWSKDYVSTEDSPRLEVESKGN 56
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF---------IFIPPFPIFIFHQIRLPSP---SQDN 513
M + D G Y C + + + H+ + P+ S+
Sbjct: 57 KTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELA 116
Query: 514 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF--GFISLDMDYVYA 571
+++ E G+V F + E K ++++ FN + G + K D G I + M+ +
Sbjct: 117 VEILEKGQVRFWMQAE-KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQD 175
Query: 572 RDSGEYICRATNKWGTAMTKAKVI------------------------------------ 595
D G Y + + T + ++
Sbjct: 176 EDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTG 235
Query: 596 -------CKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 644
CKV + W+ + +++ ++ GI L I ++++G+YE
Sbjct: 236 ECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYEV 293
Query: 645 RATNKYGSDVTKASL 659
+ G D ++ L
Sbjct: 294 ILKDDRGKDKSRLKL 308
Score = 142 bits (358), Expect = 4e-37
Identities = 50/346 (14%), Positives = 91/346 (26%), Gaps = 76/346 (21%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
P + D + S FEC P + W + R
Sbjct: 3 DPFTKEVVVNVDD-DGVISLNFECD---KMTPKSEFSWSKDYVSTEDSPRLEVESKGNKT 58
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREME 1543
M F + +D G Y C T+ G+ + I + K
Sbjct: 59 KMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELK----------------------- 95
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHT 1602
L + K V V A ++ E RF +V ++ N
Sbjct: 96 -------RLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKE 148
Query: 1603 IVNEIVRKI-------------------------------------TATETTEMEHKGKI 1625
I K+ T ++ K +
Sbjct: 149 IFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQK 208
Query: 1626 QERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSP 1684
+ + P F + + + + + T I W++++ I+
Sbjct: 209 EAEFQRQEWIRKQGPHFVEYLS-WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDE 267
Query: 1685 DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 1730
L++ + +D+G++ VI ++ GK K LV E
Sbjct: 268 KHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDE 311
Score = 139 bits (351), Expect = 4e-36
Identities = 61/325 (18%), Positives = 88/325 (27%), Gaps = 78/325 (24%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P + W K+ V R+ ++ L DD IY+C T+ G A S
Sbjct: 28 MTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSY 87
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
D E+ K + E F V + VE E
Sbjct: 88 LI-----------------------DEEELKRLLALSHEHKF-PTVPVKSELAVEILEKG 123
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF--GF 182
V F + E KV + N K IF + KM D G
Sbjct: 124 QVRFWMQAEKL------------------SGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 165
Query: 183 VVMDIAYVQSHDSGEYVCQ--------------WFVNNKPLPAGAKFKTTHDFGYVALDI 228
+ M + +Q D G Y Q K L A+F+
Sbjct: 166 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 225
Query: 229 ELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGA 270
L V W+ + + + K G L I
Sbjct: 226 VEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKD--GICTLLITEF 283
Query: 271 YAEDSGIYTVKATNSKGSATTSGTL 295
+D+GIY V + +G + L
Sbjct: 284 SKKDAGIYEVILKDDRGKDKSRLKL 308
Score = 138 bits (348), Expect = 9e-36
Identities = 45/329 (13%), Positives = 93/329 (28%), Gaps = 63/329 (19%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + +V+ +++F+C P+ + W +
Sbjct: 4 PFTKEVVVNVDDDGVISLNFECDK--------------------MTPKSEFSWSKDYVST 43
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ----------WFVNNKPLPAGAKFKTT 218
R+++ S M + D G Y C + ++ + L
Sbjct: 44 EDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHE 103
Query: 219 HDFGYVALDIELMLKTLV----------------PFTEWFVNNKPLPAGAKFKTTHDF-- 260
H F V + EL ++ L + N K + G K+K D
Sbjct: 104 HKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNT 163
Query: 261 GYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER--------LFVNHNYPLFSL 312
G + + + ED G YT + + K + ++ L
Sbjct: 164 GIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGP 223
Query: 313 QFQHLSNLS--EGEIAHFEASLIPVGDQTMT-VEFLYNGKPIEASHRIRTVHAFGMVVLE 369
F + + + + T + + + + I + G+ L
Sbjct: 224 HFVEYLSWEVTGECNVLLKCKV--ANIKKETHIVWYKDEREISVDEKHDFKD--GICTLL 279
Query: 370 ILGTKIEDTGVYTCRATNKWGQAEISVNL 398
I +D G+Y + G+ + + L
Sbjct: 280 ITEFSKKDAGIYEVILKDDRGKDKSRLKL 308
Score = 132 bits (332), Expect = 1e-33
Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 37/272 (13%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G P ++ +FEC P W + + R++ +
Sbjct: 1 GIDPFTKEVVVNVDDDGVISLNFECDKM---TPKSEFSWSKDYVSTEDSPRLEVESKGNK 57
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
+ D+ + D G+Y+C T+ G A++ + ++ + +
Sbjct: 58 TKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALS---------------- 101
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 1093
E P V +++ E G+V F + E K ++++ FN
Sbjct: 102 --------------HEHKFPTVPVKSELA-VEILEKGQVRFWMQAE-KLSGNAKVNYIFN 145
Query: 1094 GRPFATGSRVKTVYDF--GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHD 1151
+ G + K D G I + M+ + D G Y + + T + ++
Sbjct: 146 EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKK 205
Query: 1152 IVTESQLPDSMSAEKLKELEKNYTPEEIEEDE 1183
+ E++ K Y E+ +
Sbjct: 206 LQKEAEFQRQEWIRKQGPHFVEYLSWEVTGEC 237
Score = 121 bits (304), Expect = 7e-30
Identities = 38/311 (12%), Positives = 80/311 (25%), Gaps = 89/311 (28%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
W + R + ++ G+Y C T+ G +
Sbjct: 34 FSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASS------- 86
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
L D L+R EH+ V ++ L +G
Sbjct: 87 -----------------------YLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKG 123
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF--GFVILEISPVYPEDCGQY 780
+ + KV + +N K + G +++ D G + + + + ED G Y
Sbjct: 124 QVRFWMQ--AEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTY 181
Query: 781 SCRAYNDYGEAVTSASMKVQGKRSIILESQL------PKGMEVFISF------------- 821
+ + + ++ + + + E++ K F+ +
Sbjct: 182 TFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLL 241
Query: 822 -------------------HEISP-----------------VYPEDCGQYSCRAYNDYGE 845
EIS +D G Y +D G+
Sbjct: 242 KCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK 301
Query: 846 AVTSASMKVQG 856
+ + +
Sbjct: 302 DKSRLKLVDEA 312
Score = 108 bits (272), Expect = 1e-25
Identities = 33/200 (16%), Positives = 63/200 (31%), Gaps = 40/200 (20%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDF--GLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ N K+ + N + G + + D G++ + + L+ +D YT + +
Sbjct: 133 KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN 192
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
ST L + + L+K E ++ E P F+ +L+ E
Sbjct: 193 HSTVVLVGDV----------------FKKLQKEAEFQRQEWI-RKQGPHFVEYLSW-EVT 234
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
NV C+V K E + W+ + + I +
Sbjct: 235 GECNVLLKCKVANIK------------------KETHIVWYKDEREISVDEKHDFKDGIC 276
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
+ I D+G Y
Sbjct: 277 --TLLITEFSKKDAGIYEVI 294
Score = 103 bits (258), Expect = 6e-24
Identities = 47/358 (13%), Positives = 86/358 (24%), Gaps = 113/358 (31%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAFFF 1308
P + +V + FE + PRL VE
Sbjct: 2 IDPFTKEVVVNVDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVE--------- 52
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
+ + +D G Y C + G A +
Sbjct: 53 -------------------------SKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSY 87
Query: 1369 ATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFV 1428
+ + L E K P V
Sbjct: 88 LIDEEELKRLLAL------------------------------------SHEHKFPTVPV 111
Query: 1429 TQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPH--KNRFNPIYDFGYVAMN 1486
+++E +F Q A N KV + N K + K + + + G + M
Sbjct: 112 KSEL-AVEILEKGQVRFWMQ-AEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMF 169
Query: 1487 FGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASW 1546
+ ED G Y + + + + +L +
Sbjct: 170 MEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKL----------------------- 206
Query: 1547 QHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP-RVMWLINGHTI 1603
Q E ++ K+ P FV + + +V +V + ++W + I
Sbjct: 207 QKEAEFQRQEWIRKQGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 263
Score = 93.9 bits (233), Expect = 1e-20
Identities = 46/349 (13%), Positives = 96/349 (27%), Gaps = 71/349 (20%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P + + +D ++F+C P W + R++
Sbjct: 3 DPFTKEVVVN-VDDDGVISLNFECDK---MTPKSEFSWSKDYVSTEDSPRLEVESKGNKT 58
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDI---VTESQLPDSMSAEKLKE 1169
+ + D G Y C T+ G A + + K + + +E E
Sbjct: 59 KMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEEELKRLLALSHEHKFPTVPVKSELAVE 118
Query: 1170 LEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--DSELSEYQKERANESTELEKHD 1227
+ + + E ++N + + E+ E K + + +
Sbjct: 119 ILEKGQVRFWMQAEKLSGNAKVN-----------YIFNEKEIFEGPKYKMHIDRNTGIIE 167
Query: 1228 -IVTESQLPDS-----------MSAEKLKELEKNYTPEEIEEDE------IPEEPPRFIT 1269
+ + Q D + L + + +E E I ++ P F+
Sbjct: 168 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFV- 226
Query: 1270 EIESVTVQEAEPVRFETRVE-PRVDPRLR-----VECSLSTAFFFPFINISTAFLIFNFC 1323
E S V V + +V + + + E S+
Sbjct: 227 EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHD---------------- 270
Query: 1324 LHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
F G +L I +D G Y +D G+ ++ +
Sbjct: 271 ----------FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLV 309
Score = 90.1 bits (223), Expect = 2e-19
Identities = 35/267 (13%), Positives = 81/267 (30%), Gaps = 56/267 (20%)
Query: 1252 PEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFF--- 1308
+ + P + +V + E VRF + E ++ +V + F
Sbjct: 95 KRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAE-KLSGNAKVN------YIFNEK 147
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
I + + H + G + + ++ + ED+G Y + + +
Sbjct: 148 E-IFEGPKYKM-----------HIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHST 195
Query: 1369 ATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFV 1428
+ +Q + E E +KQ P FV
Sbjct: 196 VVLVGDVFKKLQKE-----------------------------AEFQRQEWIRKQGPHFV 226
Query: 1429 TQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFG 1488
++ + +C++A + W+ + + + + + + G +
Sbjct: 227 E--YLSWEVTGECNVLLKCKVA-NIKKETHIVWYKDEREISVDEKHD--FKDGICTLLIT 281
Query: 1489 WVYPEDSGEYLCRATNLYGMDETRAIL 1515
+D+G Y + G D++R L
Sbjct: 282 EFSKKDAGIYEVILKDDRGKDKSRLKL 308
Score = 66.6 bits (162), Expect = 2e-11
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
I W+K+ +S+ + F G+ TL I D+ IY + G+ S
Sbjct: 250 KETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307
Query: 67 LKIE 70
L E
Sbjct: 308 LVDE 311
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane,
transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo
sapiens}
Length = 291
Score = 167 bits (425), Expect = 3e-46
Identities = 49/294 (16%), Positives = 89/294 (30%), Gaps = 32/294 (10%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET----- 1616
++ GE F G P + G I++ +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 1617 ---TEMEHKGK----IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEVEFD 1664
+E G + E F + + P + + A
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVS 123
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN-RGGKAKC 1723
P P + W + +T+ D + + ++ I + D G++ G+
Sbjct: 124 SSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQI-LNINKSDEGIYRCEGRVEARGEIDF 182
Query: 1724 SANLVVEEKRQGGRGGVVPPSFLTT--ISSAVINVGQLARFDAKISATKPLDVYWLKNGK 1781
+V+ VPP+ +A G+ F + S + + W +NGK
Sbjct: 183 RDIIVIVN---------VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGK 233
Query: 1782 KIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
I + +Y + L + + D G Y C A N AGE +A L V +
Sbjct: 234 LIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQ 285
Score = 150 bits (381), Expect = 2e-40
Identities = 67/316 (21%), Positives = 103/316 (32%), Gaps = 56/316 (17%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
++ + LS GE F +G+ + G+ I ++ R+
Sbjct: 5 LQVTISLSKVE-LSVGESKFFTC--TAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 61
Query: 368 LEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKSKGQPPKFTSHIKSLEGLK 422
L I IED G+Y C+AT+ GQ + + Q F + E K
Sbjct: 62 LTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIY---------QKLTFREVVSPQE-FK 111
Query: 423 DGDSAHFECTLTPVN-DPELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMDIAYVQSHDS 479
G+ A C V+ P V W ++ + + NR M+++ I + D
Sbjct: 112 QGEDAEVVCR---VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ---ILNINKSDE 165
Query: 480 GEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCR 527
G Y C + +PP N ++ F CR
Sbjct: 166 GIYRCEGRVEARGEIDFRDIIVIVNVPPAISMP--------QKSFNATAERGEEMTFSCR 217
Query: 528 LEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 587
P I WF NG+ + L + + D G Y+CRATNK G
Sbjct: 218 --ASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGE 273
Query: 588 AMTKAKVICKVLTVIV 603
+A L V V
Sbjct: 274 DEKQAF-----LQVFV 284
Score = 145 bits (368), Expect = 1e-38
Identities = 55/342 (16%), Positives = 98/342 (28%), Gaps = 77/342 (22%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
+ + + L +S F C +G+P + G+ + R +
Sbjct: 4 LLQVTISLSKVE-LSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS 60
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREME 1543
+ ED+G Y C+AT+ G + ++
Sbjct: 61 RLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI------------------------- 95
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHT 1602
+ F Q+ ++GE A C RV+ P P V WL +
Sbjct: 96 ----------------YQKLTFREVVSPQEFKQGEDAEVVC-RVSSSPAPAVSWLYHNEE 138
Query: 1603 IVNEIVRKITATETTEM-------------------EHKGKIQERVVDASEKPAKPPVFT 1643
+ + + E +G+I R +
Sbjct: 139 VTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMP 198
Query: 1644 KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 1703
+K A ++ F G P P I WFR I + + + + + L +R +
Sbjct: 199 QKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYIL--KGSNTELTVRNII 256
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSF 1745
D G + A N+ G+ + A L V V
Sbjct: 257 NSDGGPYVCRATNKAGEDEKQAFLQV----------FVQHHH 288
Score = 144 bits (365), Expect = 4e-38
Identities = 41/248 (16%), Positives = 84/248 (33%), Gaps = 31/248 (12%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
T + + F G+P + + I S+ + +S L
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 63
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVG 1757
+ +ED+G++ A + G+ + + L + + +F +S G
Sbjct: 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ----------KLTFREVVSPQEFKQG 113
Query: 1758 QLARFDAKISATKPLDVYWLKNGKKII--PDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
+ A ++S++ V WL + +++ D R+ L + L I+ D G Y C
Sbjct: 114 EDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRC 170
Query: 1816 VAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLK 1875
A +++V P A ++ + + + G +T
Sbjct: 171 EGRVEARGEIDFRDIIVIVNVPP---------------AISMPQKSFNATAERGEEMTFS 215
Query: 1876 CRITGKPR 1883
CR +G P
Sbjct: 216 CRASGSPE 223
Score = 126 bits (319), Expect = 4e-32
Identities = 52/257 (20%), Positives = 88/257 (34%), Gaps = 22/257 (8%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSA-TTSGTL 295
+ + + + + + L I A ED+GIY +AT++KG + L
Sbjct: 34 SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 93
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
+ ++ F +GE A V +LY+ + +
Sbjct: 94 EIYQK-------LTFREVVSPQE-FKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTIS 143
Query: 356 RIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
R + A L+IL D G+Y C + ++ + PP +
Sbjct: 144 DNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNV---PPAISMP 198
Query: 415 IKSLE-GLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY 473
KS + G+ F C PE + WF NGK I + + + +
Sbjct: 199 QKSFNATAERGEEMTFSC--RASGSPEPAISWFRNGKLIEENEKYILKGSNTELT--VRN 254
Query: 474 VQSHDSGEYVCRAWNNF 490
+ + D G YVCRA N
Sbjct: 255 IINSDGGPYVCRATNKA 271
Score = 121 bits (305), Expect = 3e-30
Identities = 55/329 (16%), Positives = 103/329 (31%), Gaps = 81/329 (24%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
S +++ F C +P + G + RV + L +
Sbjct: 9 ISLSKVELSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYN 66
Query: 569 VYARDSGEYICRATNKWGTAMTK--------------------------AKVICKVL--- 599
D+G Y C+AT+ G A+V+C+V
Sbjct: 67 ANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSP 126
Query: 600 TVIVEWFYNGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKA 657
V W Y+ +++ +R+ + + IL+I + + G+Y C + ++
Sbjct: 127 APAVSWLYHNEEVTTISDNRFAMLANNNLQILNIN---KSDEGIYRCEGRVEARGEIDFR 183
Query: 658 SLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNID 717
+I+ +P P ++P + +
Sbjct: 184 D--------IIVIVNVP--------------------------------PAISMPQKSFN 203
Query: 718 -DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPED 776
GE F R + P+ + WF NGK ++ ++ L + + D
Sbjct: 204 ATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSD 259
Query: 777 CGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
G Y CRA N GE A ++V +
Sbjct: 260 GGPYVCRATNKAGEDEKQAFLQVFVQHHH 288
Score = 121 bits (304), Expect = 4e-30
Identities = 60/321 (18%), Positives = 104/321 (32%), Gaps = 54/321 (16%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
T+ LS ++ L GE+ F +P+ + G+ + + R +
Sbjct: 4 LLQVTISLSKVE-LSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS 60
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEVFISFHEI 824
L I ED G Y C+A + G+ + +++ K + ++ E
Sbjct: 61 RLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFR---EVVSPQE-------- 109
Query: 825 SPVYPEDCGQYSCRA-----------YNDYGEAVTSASMKVQGKRSIILESQLPKGMEGT 873
+ + CR Y+ E VT+ S R +L +
Sbjct: 110 --FKQGEDAEVVCRVSSSPAPAVSWLYH--NEEVTTIS----DNRFAMLAN-------NN 154
Query: 874 IDKIAELEGYGHEREDRTIDK-IAELEGYGHEREDRIEEDLGKAPEFLTT--PTDLTLAE 930
+ +I + + D I + +E G I + P + T
Sbjct: 155 L-QILNIN-----KSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAER 208
Query: 931 STLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYT 990
F CR + P + WF NGK + + L + ++ D G Y
Sbjct: 209 GEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYV 264
Query: 991 CKATNKHGEATTSCKLTVKGR 1011
C+ATNK GE L V +
Sbjct: 265 CRATNKAGEDEKQAFLQVFVQ 285
Score = 117 bits (294), Expect = 9e-29
Identities = 56/294 (19%), Positives = 91/294 (30%), Gaps = 59/294 (20%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
+ T + +E G+S F CT + +PE + G+ I RV + +
Sbjct: 4 LLQVTISLSKVELSV-GESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS 60
Query: 468 VMDIAYVQSHDSGEYVCRAWNNF---------IFIPPFPIFIFHQIRLPSPSQDNLDVPE 518
+ I D+G Y C+A + + I F + S + +
Sbjct: 61 RLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFR----EVVS----PQEFKQ 112
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK-TVYDFGFISLDMDYVYARDSGEY 577
CR S P + W ++ T S + + +L + + D G Y
Sbjct: 113 GEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINKSDEGIY 168
Query: 578 ICRATNKWGTAMTKAKVICKV--------------LTVI------------------VEW 605
C + + +I V T + W
Sbjct: 169 RCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISW 228
Query: 606 FYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
F NGK + +Y L + + G Y CRATNK G D +A L
Sbjct: 229 FRNGKLIEENEKYILKGSNTE--LTVRNIINSDGGPYVCRATNKAGEDEKQAFL 280
Score = 117 bits (294), Expect = 1e-28
Identities = 48/315 (15%), Positives = 85/315 (26%), Gaps = 90/315 (28%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS-TCTLKI 69
+ G + R+ + L+I + +D+ IY C+AT+ G+ T L+
Sbjct: 36 DWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE- 94
Query: 70 EDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFD 129
++ F ++ E K+ E+
Sbjct: 95 -----------------------------------IYQKLTFREVVSPQEFKQGEDAEVV 119
Query: 130 CRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMDI 187
CRV P V W ++ + + NR M+++ I
Sbjct: 120 CRVS---------S----------SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ---I 157
Query: 188 AYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVAL-----------DIELMLKTLV 236
+ D G Y C A + V + + +
Sbjct: 158 LNINKSDEGIYRC--EGRV---EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEM 212
Query: 237 PFT-----------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNS 285
F+ WF N K + K+ L + D G Y +ATN
Sbjct: 213 TFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNK 270
Query: 286 KGSATTSGTLKCLER 300
G L+ +
Sbjct: 271 AGEDEKQAFLQVFVQ 285
Score = 116 bits (292), Expect = 2e-28
Identities = 60/327 (18%), Positives = 95/327 (29%), Gaps = 61/327 (18%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
L+ VE E+ F C G +PE + G+ I
Sbjct: 5 LQVTISLSKVELSVGESKFFTCTAI---------G----------EPESIDWYNPQGEKI 45
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAG-AKFKTTHDFGYVALD 227
RV + + + I D+G Y CQ + G + T Y L
Sbjct: 46 ISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ--ATD---AKGQTQEATVVLEIYQKLT 100
Query: 228 IELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
++ P W +N+ + + + L I+
Sbjct: 101 FREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN-LQILN 159
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAH 327
D GIY + G + + + + + P S+ Q N + GE
Sbjct: 160 INKSDEGIYRCEGRVEAR-----GEIDFRDIIVIVNVPPAISMP-QKSFNATAERGEEMT 213
Query: 328 FEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATN 387
F G + + NGK IE + + + L + D G Y CRATN
Sbjct: 214 FSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATN 269
Query: 388 KWGQAEISVNLECVDKSKGQPPKFTSH 414
K G+ E L+ H
Sbjct: 270 KAGEDEKQAFLQVFV-----QHHHHHH 291
Score = 109 bits (274), Expect = 4e-26
Identities = 44/241 (18%), Positives = 76/241 (31%), Gaps = 54/241 (22%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS--RIKTINDFGF 973
F + + A CR ++ P+ V W ++ + ++ S R + +
Sbjct: 98 KLTFREVVSPQEFKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN- 154
Query: 974 VILEINDVYLRDSGLYTCKATNK-HGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
L+I ++ D G+Y C+ + GE + + V+
Sbjct: 155 --LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI-----------VNV---------- 191
Query: 1033 KLEEALYRKDELIPDEEKPNPPVFT-SQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
PP + Q N ++ F CR P I WF
Sbjct: 192 --------------------PPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWF 229
Query: 1092 FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHD 1151
NG+ + L + + D G Y+CRATNK G +A + +H
Sbjct: 230 RNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQHH 287
Query: 1152 I 1152
Sbjct: 288 H 288
Score = 104 bits (261), Expect = 2e-24
Identities = 54/304 (17%), Positives = 86/304 (28%), Gaps = 95/304 (31%)
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
I + G+K+ R + L I E++G+Y C+AT+ G
Sbjct: 35 IDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA----- 89
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
T +E Q F +S + ++
Sbjct: 90 ------------------------------------TVVLEIYQKLTFREVVSPQE-FKQ 112
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-----LEISPVYPED 776
GE+A R + P V W ++ + + T S R F + L+I + D
Sbjct: 113 GEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNR------FAMLANNNLQILNINKSD 164
Query: 777 CGQYSCRAYNDY-GEAVTSASMKVQGKRSIILESQLPK------GMEVFIS--------- 820
G Y C + GE + + I Q G E+ S
Sbjct: 165 EGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEP 224
Query: 821 ----FHE--------------------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
F + + D G Y CRA N GE A ++V
Sbjct: 225 AISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284
Query: 857 KRSI 860
+
Sbjct: 285 QHHH 288
Score = 102 bits (257), Expect = 6e-24
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 20/145 (13%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFT 1799
+ ++S ++VG+ F ++ G+KII R +E
Sbjct: 2 MALLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 61
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L I A +ED+G Y C A + G+ + L + + T
Sbjct: 62 LTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------------QKLTFR 102
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
E + Q K+G + CR++ P
Sbjct: 103 EVVSPQEFKQGEDAEVVCRVSSSPA 127
Score = 97.6 bits (243), Expect = 5e-22
Identities = 30/232 (12%), Positives = 65/232 (28%), Gaps = 51/232 (21%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+ + + + L+ F C +P + G+ + + R+ +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 61
Query: 976 LEINDVYLRDSGLYTCKATNKHGEA-TTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
L I + + D+G+Y C+AT+ G+ + L +
Sbjct: 62 LTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ------------------------ 97
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
F + + + CR S P + W ++
Sbjct: 98 ------------------KLTFREVVSP-QEFKQGEDAEVVCR--VSSSPAPAVSWLYHN 136
Query: 1095 RPFATGSRVK-TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
T S + + +L + + D G Y C + + +I
Sbjct: 137 EEVTTISDNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDII 186
Score = 89.5 bits (222), Expect = 3e-19
Identities = 44/370 (11%), Positives = 75/370 (20%), Gaps = 140/370 (37%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVE---------------PRVDPRLRVECSLSTAFFF 1308
+ + V + E F R+ V+ +
Sbjct: 4 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS--- 60
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
L I ED G Y C+A + G+
Sbjct: 61 -------------------------------RLTIYNANIEDAGIYRCQATDAKGQT--- 86
Query: 1369 ATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFV 1428
+ + L Q F
Sbjct: 87 ------------------------------------QEATVVLEI--------YQKLTFR 102
Query: 1429 TQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFG 1488
+ Q + + + + C+ P V W + + + + N +
Sbjct: 103 EVVSPQ-EFKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISD-NRFAMLANNNLQIL 158
Query: 1489 WVYPEDSGEYLCRATNLY-GMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQ 1547
+ D G Y C G + R I+ P
Sbjct: 159 NINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVP-------------------------- 192
Query: 1548 HTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEI 1607
A + + GE F R +G P P + W NG I
Sbjct: 193 -------------PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENE 239
Query: 1608 VRKITATETT 1617
+ + T
Sbjct: 240 KYILKGSNTE 249
Score = 82.6 bits (204), Expect = 6e-17
Identities = 31/200 (15%), Positives = 55/200 (27%), Gaps = 54/200 (27%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ P + W + ++ S R L I ++ D IY C+
Sbjct: 121 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN-NLQILNINKSDEGIYRCEGRVEARGE 179
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
+ + + + P I +K + +
Sbjct: 180 IDFRDIIVIV-----------NVPPAISMPQKSF---------------------NATAE 207
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
E + F CR G PE + WF NGK I + +
Sbjct: 208 RGEEMTFSCRAS---------G----------SPEPAISWFRNGKLIEENEKYILKGSNT 248
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
+ + + + D G YVC+
Sbjct: 249 ELT--VRNIINSDGGPYVCR 266
Score = 76.0 bits (187), Expect = 9e-15
Identities = 42/270 (15%), Positives = 73/270 (27%), Gaps = 81/270 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPR---LRVECSLSTAFFFPFINISTA 1316
+ F + ++ E RV P P L ++T F ++
Sbjct: 96 YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPA--PAVSWLYHNEEVTTISDNRFAMLANN 153
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKI 1376
+L I + D+G Y C + I
Sbjct: 154 -----------------------NLQILNINKSDEGIYRCEGRVEARGEIDFRDI----- 185
Query: 1377 PTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQ 1436
++ + PP K+ +
Sbjct: 186 ------------------IVIVNV-----------------------PPAISMPQKSFNA 204
Query: 1437 LVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDS 1495
E + F C+ G P + WF NGK + ++ + + + D
Sbjct: 205 TAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRN--IINSDG 260
Query: 1496 GEYLCRATNLYGMDETRAILKTTGKPGIIY 1525
G Y+CRATN G DE +A L+ + +
Sbjct: 261 GPYVCRATNKAGEDEKQAFLQVFVQHHHHH 290
Score = 67.5 bits (165), Expect = 6e-12
Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P I WF+NG + + L++ ++ D Y C+ATN GE
Sbjct: 217 RASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGED 274
Query: 62 VSTCTLKIEDRH 73
L++ +H
Sbjct: 275 EKQAFLQVFVQH 286
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion,
membrane, development protein; HET: NAG; 1.95A
{Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Length = 388
Score = 168 bits (427), Expect = 3e-45
Identities = 66/450 (14%), Positives = 113/450 (25%), Gaps = 102/450 (22%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFL-NGKPLPHKNRFNPIYDF 1480
++ P F+ + + + EC+ G+P ++ W +G + I
Sbjct: 1 QKGPVFLKEPTNRIDFSNSTGAEIECK--ASGNPMPEIIWIRSDGTAVGDVPGLRQISSD 58
Query: 1481 G----YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSI 1536
G + + Y C A N +G +R +
Sbjct: 59 GKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVA--------------- 103
Query: 1537 EKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CT--RVTGYPRPR 1593
+ + + V G A C
Sbjct: 104 --------------------------QYYEADVNKEHVIRGNSAVIKCLIPSFVADFVEV 137
Query: 1594 VMWLINGHTIVNEIV---RKITATE--------------------------TTEMEHKGK 1624
V W + K T E
Sbjct: 138 VSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSAT 197
Query: 1625 IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP 1684
V+ + P +P G P P+ +W++ T
Sbjct: 198 KGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQ 257
Query: 1685 DFQIHTFSTKS--ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVP 1742
++ + LI++ +EDSG + + N G L V P
Sbjct: 258 AVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA----------P 307
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLI 1802
S + ++ G+ A F + + V W+K+GK I L I
Sbjct: 308 LSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----------VLRI 357
Query: 1803 IEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
ED G Y+C N+ A AEL +
Sbjct: 358 ESVKKEDKGMYQCFVRNDRESAEASAELKL 387
Score = 148 bits (374), Expect = 2e-38
Identities = 63/362 (17%), Positives = 105/362 (29%), Gaps = 64/362 (17%)
Query: 1560 KEAPVFVSQPEAQ-KVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE----------- 1606
++ PVF+ +P + A C + +G P P ++W+ + T V +
Sbjct: 1 QKGPVFLKEPTNRIDFSNSTGAEIEC-KASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG 59
Query: 1607 --IVRKITATETTEMEHK-----------GKIQERVVDASEKPAKPPVFTKKIQPCRAFE 1653
+ A + + H G I R D + + +
Sbjct: 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISR--DVHVRAVVAQYYEADVNKEHVIR 117
Query: 1654 QDQARFE---VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS--ILIMRQVFMEDS- 1707
+ A + F D + + W ++ + L +R+V ED
Sbjct: 118 GNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGY 177
Query: 1708 GVFAVIAENR-GGKAKCSAN---LVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFD 1763
+ ++R G+ + SA LV+ E P + + V
Sbjct: 178 KSYQCRTKHRLTGETRLSATKGRLVITE----PISSSAPRTPALVQKPLELMVAHTISLL 233
Query: 1764 AKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF--TLLIIEAVVEDSGAYECVAMNNA 1821
W K + + TL+I +AVVEDSG Y CV N+
Sbjct: 234 CPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSV 293
Query: 1822 GEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGK 1881
G E L V + Q V G C+ TG
Sbjct: 294 GGESVETVLTVT-------------------APLSAKIDPPTQTVDFGRPAVFTCQYTGN 334
Query: 1882 PR 1883
P
Sbjct: 335 PI 336
Score = 136 bits (344), Expect = 2e-34
Identities = 70/407 (17%), Positives = 123/407 (30%), Gaps = 78/407 (19%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVE-FLYNGKPIEASHRIRTVHAFG 364
P+F + + + S A E AS G+ + +G + +R + + G
Sbjct: 4 PVFLKEPTNRIDFSNSTGAEIECKAS----GNPMPEIIWIRSDGTAVGDVPGLRQISSDG 59
Query: 365 MVVLEIL----GTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEG 420
+V + VY C A N++G IS + V + + +
Sbjct: 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSI-ISRD---VHVRAVVAQYYEADVNKEHV 115
Query: 421 LKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-----IAYV 474
++ G+SA +C + D V W + + + D ++V+ I V
Sbjct: 116 IR-GNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE---YDGKYLVLPSGELHIREV 171
Query: 475 QSHDS-GEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVH 523
D Y CR + + R P+ Q L++ A +
Sbjct: 172 GPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTIS 231
Query: 524 FDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI--SLDMDYVYARDSGEYICRA 581
C + P W+ V + +L + DSG+Y+C
Sbjct: 232 LLC--PAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVV 289
Query: 582 TNKWGTAMTKAKVI-------------------------CKVL---TVIVEWFYNGKKLP 613
N G + + C+ V W +GK +
Sbjct: 290 NNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIG 349
Query: 614 HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
H +L I +E+ G+Y+C N S A LK
Sbjct: 350 HSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASAELK 386
Score = 122 bits (308), Expect = 9e-30
Identities = 75/439 (17%), Positives = 114/439 (25%), Gaps = 122/439 (27%)
Query: 2 EPRADPNLKIEWFK-NGVPLSLGSRIRSTFDFGLVTLSINSLRADD------SAIYTCKA 54
+ +P +I W + +G + +R G L RA+D + +Y C A
Sbjct: 27 KASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLA 84
Query: 55 TNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISH 114
N G +S + VR + +
Sbjct: 85 RNQFGSIIS-----------------------------RDVHVRAVVA------QYYEAD 109
Query: 115 LNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRV 174
+N + C + V D V W + + +
Sbjct: 110 VNKEHVIRGNSAVIKCLIPSF----------------VADFVEVVSWHTDEEENYFPGAE 153
Query: 175 KMVSDFGFVVMD-----IAYVQSHDS-GEYVCQWFVNNKPL-------PAGAKFKTTHDF 221
D ++V+ I V D Y C ++ G T
Sbjct: 154 ---YDGKYLVLPSGELHIREVGPEDGYKSYQC--RTKHRLTGETRLSATKGRLVITEPIS 208
Query: 222 GYVALDIELMLKTL------------------VPFTEWFVNNKPLPAGAKFKTTHDFGYV 263
L+ K L P W+ + V
Sbjct: 209 SSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQV 268
Query: 264 A--LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS 321
+ L I A EDSG Y NS G + L + + +
Sbjct: 269 SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP-------LSAKIDPPTQT-VD 320
Query: 322 EGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTG 379
G A F + G+ TV ++ +GK I S VL I K ED G
Sbjct: 321 FGRPAVFTCQYT----GNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKG 366
Query: 380 VYTCRATNKWGQAEISVNL 398
+Y C N AE S L
Sbjct: 367 MYQCFVRNDRESAEASAEL 385
Score = 122 bits (308), Expect = 1e-29
Identities = 59/387 (15%), Positives = 100/387 (25%), Gaps = 64/387 (16%)
Query: 237 PFTEWFVNNK-PLPAGAKFKTTHDFGYVALDIVGAYAED------SGIYTVKATNSKGSA 289
P W ++ + + G L AED + +Y A N GS
Sbjct: 34 PEIIWIRSDGTAVGDVPGLRQISSDG--KLVFPPFRAEDYRQEVHAQVYACLARNQFGSI 91
Query: 290 TTSGTLKCLERLFVNHNY-PLFSLQFQHLSNLSEGEIAHFEASLIP-VGDQTMTVEFLYN 347
+ + V + + G A + + V D V + +
Sbjct: 92 IS-------RDVHVRAVVAQYYEADVNKEH-VIRGNSAVIKCLIPSFVADFVEVVSWHTD 143
Query: 348 GKPIEASHRI--RTVHAFGMVVLEILGTKIEDT-GVYTCRATNKWGQAEISVN----LEC 400
+ L I ED Y CR ++ L
Sbjct: 144 EEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVI 203
Query: 401 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVK 459
+ P+ + ++ L + C P P W+ + K V
Sbjct: 204 TEPISSSAPRTPALVQKPLELMVAHTISLLC---PAQGFPAPSFRWYKFIEGTTRKQAVV 260
Query: 460 MVSDFGFV--VMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLP 507
+ V + I DSG+Y+C N+ + P
Sbjct: 261 LNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPL----SAKI---- 312
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
P V F C+ +P + W +G+ L ++
Sbjct: 313 DPP--TQTVDFGRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSES----------VLRIE 358
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKV 594
V D G Y C N +A A++
Sbjct: 359 SVKKEDKGMYQCFVRNDRESAEASAEL 385
Score = 119 bits (299), Expect = 1e-28
Identities = 68/457 (14%), Positives = 112/457 (24%), Gaps = 135/457 (29%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFG 465
+ P F + + A EC + +P ++ W +G + ++ +S G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECKASG--NPMPEIIWIRSDGTAVGDVPGLRQISSDG 59
Query: 466 ----FVVMDIAYVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSP 509
Y Q + Y C A N F + +
Sbjct: 60 KLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYY-----------EA 108
Query: 510 SQDNLDVPEAGKVHFDCRLEP-KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLD--- 565
+ V C + +D + W + YD ++ L
Sbjct: 109 DVNKEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPG---AEYDGKYLVLPSGE 165
Query: 566 --MDYVYARDS-GEYICRATNKWG----TAMTKAKVI----------------------- 595
+ V D Y CR ++ + TK +++
Sbjct: 166 LHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELM 225
Query: 596 --------CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIV--ILDILYCYEENSGVY 642
C W+ + V L I E+SG Y
Sbjct: 226 VAHTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKY 285
Query: 643 ECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIE 702
C N G + + L T+
Sbjct: 286 LCVVNNSVGGESVETVL--------------------------TVTA------------- 306
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF 762
+ + G A F + T +P V W +GK +
Sbjct: 307 ---PLSAKIDPPTQ-TVDFGRPAVFTCQ--YTGNPIKTVSWMKDGKAIGHSES------- 353
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
+L I V ED G Y C ND A SA +K+
Sbjct: 354 ---VLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387
Score = 118 bits (297), Expect = 2e-28
Identities = 74/496 (14%), Positives = 122/496 (24%), Gaps = 168/496 (33%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWF-WNGKPMKTGSRFRTFCDFG 763
+ PVF +N D A E + + +P ++ W +G + R G
Sbjct: 2 KGPVFLKEPTNRIDFSNSTGAEIECK--ASGNPMPEIIWIRSDGTAVGDVPGLRQISSDG 59
Query: 764 FVILEISPVYPEDC------GQYSCRAYNDYGEAVTSASMKVQGKR-------------- 803
L P ED Y+C A N +G + S + V+
Sbjct: 60 --KLVFPPFRAEDYRQEVHAQVYACLARNQFGSII-SRDVHVRAVVAQYYEADVNKEHVI 116
Query: 804 ---SIILESQLPKGM------------------------EVFISFHE----ISPVYPED- 831
S +++ +P + ++ I V PED
Sbjct: 117 RGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDG 176
Query: 832 CGQYSCRAYNDYG-EAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDR 890
Y CR + E SA+
Sbjct: 177 YKSYQCRTKHRLTGETRLSATKGR------------------------------------ 200
Query: 891 TIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTV 950
+ I + P + P +L +A + C P+ +
Sbjct: 201 ------------LVITEPISSSAPRTPALVQKPLELMVAHT--ISLLCP--AQGFPAPSF 244
Query: 951 EWFHNGKALSAGSRIKTINDFGFV--ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
W+ + + + + V L I D + DSG Y C N G + LTV
Sbjct: 245 RWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTV 304
Query: 1009 KGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPE 1068
P V
Sbjct: 305 TA------------------------------------------PLSAKIDPPT-QTVDF 321
Query: 1069 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 1128
F C+ +P + W +G+ L ++ V D G Y
Sbjct: 322 GRPAVFTCQYT--GNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQ 369
Query: 1129 CRATNKWGTAMTKAKV 1144
C N +A A++
Sbjct: 370 CFVRNDRESAEASAEL 385
Score = 116 bits (291), Expect = 2e-27
Identities = 61/430 (14%), Positives = 107/430 (24%), Gaps = 118/430 (27%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGSRVKT 555
P+F+ + +D + +C + +P I W +G ++
Sbjct: 4 PVFLKE-------PTNRIDFSNSTGAEIEC--KASGNPMPEIIWIRSDGTAVGDVPGLRQ 54
Query: 556 VYDFG--FIS--LDMDYVYARDSGEYICRATNKWGTAMT-KAKVI--------------- 595
+ G DY + Y C A N++G+ ++ V
Sbjct: 55 ISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEH 114
Query: 596 ----------CKV------LTVIVEWFYNGKKLPHGH-----RYRTFHDFGIVILDILYC 634
C + +V W + ++ +Y + I ++
Sbjct: 115 VIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGP- 173
Query: 635 YEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLR 694
E+ Y+CR ++ + +S T L P
Sbjct: 174 -EDGYKSYQCRTKHRLTGETR------LSATKGRLVITEPISS----------------- 209
Query: 695 RTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS 754
AP + +L P W+ +
Sbjct: 210 ----------SAPRTPALVQKPLELMVAHTISLLCP--AQGFPAPSFRWYKFIEGTTRKQ 257
Query: 755 RFRTFCDFGFV--ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE---S 809
V L I ED G+Y C N G + V S ++
Sbjct: 258 AVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQ 317
Query: 810 QLPKGMEVFIS-------------FHE------------ISPVYPEDCGQYSCRAYNDYG 844
+ G + + I V ED G Y C ND
Sbjct: 318 TVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRE 377
Query: 845 EAVTSASMKV 854
A SA +K+
Sbjct: 378 SAEASAELKL 387
Score = 113 bits (283), Expect = 1e-26
Identities = 75/482 (15%), Positives = 119/482 (24%), Gaps = 116/482 (24%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGSRVKTVYDFG- 1110
PVF + + +D + +C + +P I W +G ++ + G
Sbjct: 3 GPVFLKEPTNRIDFSNSTGAEIEC--KASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGK 60
Query: 1111 -FIS--LDMDYVYARDSGEYICRATNKWGTAMT-KAKVICKAKHDIVTESQLPDSMSAEK 1166
DY + Y C A N++G+ ++ V +
Sbjct: 61 LVFPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAVVAQYYEADVN--------- 111
Query: 1167 LKELEKNYTPEEIEEDE-------IPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANE 1219
E + IP + ++ Y K
Sbjct: 112 ---------KEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLP 162
Query: 1220 STELEKHDIVTESQLPDSMSAEKLKELEKNY----TPEEIEEDEIPEEPPRFITEIESVT 1275
S EL + E D K+Y E + R + +
Sbjct: 163 SGEL----HIREVGPEDG---------YKSYQCRTKHRLTGETRLSATKGRLVITEPISS 209
Query: 1276 VQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFD 1335
P + +E V + + C A FP + I + +
Sbjct: 210 SAPRTPALVQKPLELMVAHTISLLCP---AQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK 266
Query: 1336 LGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEAL 1395
+L I ED G+Y+C N G + + T+
Sbjct: 267 QVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVL------TVT--------------- 305
Query: 1396 IQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQST-KFECQLAPVGD 1454
P Q V+ F CQ G+
Sbjct: 306 ---------------------------APLSAKIDP--PTQTVDFGRPAVFTCQYT--GN 334
Query: 1455 PNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
P V W +GK + H I V ED G Y C N E A
Sbjct: 335 PIKTVSWMKDGKAIGHSESVLRIES----------VKKEDKGMYQCFVRNDRESAEASAE 384
Query: 1515 LK 1516
LK
Sbjct: 385 LK 386
Score = 111 bits (280), Expect = 4e-26
Identities = 66/502 (13%), Positives = 119/502 (23%), Gaps = 149/502 (29%)
Query: 1262 EEPPRFITE-IESVTVQEAEPVRFETRVEPRVDPRLR--------VECSLSTAFFFPFIN 1312
++ P F+ E + + E + P + V
Sbjct: 1 QKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISS--- 57
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+ F DY Y C A N G ++
Sbjct: 58 -DGKLVFPPFRAE------------------DYRQEVHAQVYACLARNQFGSIISR---- 94
Query: 1373 CKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIK 1432
+ ++ V + +
Sbjct: 95 -----DVHVRAVVA--------------------------------------QYYEADVN 111
Query: 1433 TQDQLVEMQSTKFECQLAP-VGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-- 1489
+ ++ S +C + V D V W + + YD Y+ + G
Sbjct: 112 KE-HVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE---YDGKYLVLPSGELH 167
Query: 1490 ---VYPEDS-GEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEAS 1545
V PED Y CR + E S
Sbjct: 168 IREVGPEDGYKSYQCRTKHRLT--------------------------------GETRLS 195
Query: 1546 WQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWL-------I 1598
+ E + ++ G+P P W
Sbjct: 196 ATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTR 255
Query: 1599 NGHTIVNEIVRKITAT---ETTEMEHKGK---IQERVVDASEKPAK-----PPVFTKKIQ 1647
++N+ V++++ T + +E GK + V P
Sbjct: 256 KQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPP 315
Query: 1648 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS 1707
A F ++ G+P+ T+ W ++ I S S+L + V ED
Sbjct: 316 TQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDK 365
Query: 1708 GVFAVIAENRGGKAKCSANLVV 1729
G++ N A+ SA L +
Sbjct: 366 GMYQCFVRNDRESAEASAELKL 387
Score = 75.7 bits (186), Expect = 3e-14
Identities = 48/326 (14%), Positives = 85/326 (26%), Gaps = 107/326 (32%)
Query: 600 TVIVEWF-YNGKKLPHGHRYRTFHDFG-IVILDIL---YCYEENSGVYECRATNKYGSDV 654
+ W +G + R G +V Y E ++ VY C A N++GS +
Sbjct: 33 MPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYACLARNQFGSII 92
Query: 655 TKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLS 714
++ H+R A + ++
Sbjct: 93 SRD---------------------------------VHVRAVV--------AQYYEADVN 111
Query: 715 NIDDLREGENAHFEARLTPTD-DPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-----LE 768
+ G +A + + D V W + + D +++ L
Sbjct: 112 KEH-VIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEY---DGKYLVLPSGELH 167
Query: 769 ISPVYPED-CGQYSCRAYNDYG-EAVTSAS------------------------MKVQGK 802
I V PED Y CR + E SA+ +++
Sbjct: 168 IREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVA 227
Query: 803 RSIILE-----------------SQLPKGMEVFISFH--------EISPVYPEDCGQYSC 837
+I L + V ++ I ED G+Y C
Sbjct: 228 HTISLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLC 287
Query: 838 RAYNDYGEAVTSASMKVQGKRSIILE 863
N G + V S ++
Sbjct: 288 VVNNSVGGESVETVLTVTAPLSAKID 313
Score = 70.4 bits (172), Expect = 2e-12
Identities = 48/316 (15%), Positives = 74/316 (23%), Gaps = 85/316 (26%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDS-AIYTCKATNLLGEA 61
AD + W + L L I + +D Y C+ + L
Sbjct: 132 ADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGE 191
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL-NDVEC 120
L K + +P + + +E
Sbjct: 192 TR---------------------------LSATKGRLVITEPISSSAPRTPALVQKPLEL 224
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
+ C + G P W+ + K V +
Sbjct: 225 MVAHTISLLCPAQ---------G----------FPAPSFRWYKFIEGTTRKQAVVLNDRV 265
Query: 181 GFV--VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV-- 236
V + I DSG+Y+C VNN G + T L ++ T
Sbjct: 266 KQVSGTLIIKDAVVEDSGKYLCV--VNN---SVGGESVETVLTVTAPLSAKIDPPTQTVD 320
Query: 237 ----------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTV 280
W + K + L I ED G+Y
Sbjct: 321 FGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQC 370
Query: 281 KATNSKGSATTSGTLK 296
N + SA S LK
Sbjct: 371 FVRNDRESAEASAELK 386
Score = 60.3 bits (146), Expect = 3e-09
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+P + W K+G + L I S++ +D +Y C N A ++
Sbjct: 334 NPIKTVSWMKDGKAIGHSES----------VLRIESVKKEDKGMYQCFVRNDRESAEASA 383
Query: 66 TLKI 69
LK+
Sbjct: 384 ELKL 387
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical
bundle cytokine, hematopoietic cytokine-receptor
complex, cell surface, EXTR complex; 7.80A {Homo
sapiens}
Length = 527
Score = 171 bits (433), Expect = 6e-45
Identities = 75/482 (15%), Positives = 134/482 (27%), Gaps = 86/482 (17%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W + L F + G V++ I+ +G Y + + + T T+
Sbjct: 81 LWVFKHSSLNCQPHFDLQNR-GVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRN 139
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPV--GDQTMTVEFLYNGKPIEASHRI 357
L P F E + A L+ + VE++ E+
Sbjct: 140 TLLYTLRRPYFRK--------MENQDA-----LVCISESVPEPIVEWVLCDSQGESCKEE 186
Query: 358 RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKS 417
+V E C A N+ G+ + ++ Q P+ T
Sbjct: 187 SP----AVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN----QTPQTTL---P 235
Query: 418 LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD------I 471
LK G+ C VN + W K + N +M + M +
Sbjct: 236 QLFLKVGEPLWIRCKAVHVN-HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFV 294
Query: 472 AYVQSHDSGEYVCRAWNNF-------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHF 524
+ V +D+G Y C + + I F I + S+D ++ + + F
Sbjct: 295 SSVARNDTGYYTCSSSKHPSQSALVTIVEKGF-------INATNSSED-YEIDQYEEFCF 346
Query: 525 DCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNK 584
K+ P +R W F+ + F + D G+ S+ + GEYI A N
Sbjct: 347 SV--RFKAYPQIRCTWTFSRKSFPCEQKG---LDNGY-SISKFCNHKHQPGEYIFHAEND 400
Query: 585 WGTAMTKAKVICKVLTVIVE--------------------WFYNGKKLPHGHRY------ 618
+ + ++ W K P+
Sbjct: 401 DAQFTKMFTLNIRRKPQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVW 460
Query: 619 -----RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQL 673
R + + + +C A N G+ L I +
Sbjct: 461 NRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGGT 520
Query: 674 PE 675
Sbjct: 521 KH 522
Score = 168 bits (426), Expect = 4e-44
Identities = 65/586 (11%), Positives = 136/586 (23%), Gaps = 167/586 (28%)
Query: 376 EDTGVYTC----RATNKWGQAEISVNLECVDKSKG-------QPPKFTSHIKSLEGLKDG 424
+D V C N + S + + Q ++E +
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVE-VDVS 63
Query: 425 DSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 484
S + + + W + + + + ++ I + +GEY+
Sbjct: 64 ASITLQVLVD--APGNISCLWVFKHSSLNCQPHFDLQNRGVVSMV-ILKMTETQAGEYLL 120
Query: 485 RAWNNF--------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTM 536
+ + I ++ L P + C E S P
Sbjct: 121 FIQSEATNYTILFTVSIRNTLLYT-----LRRPYF----RKMENQDALVCISE--SVPEP 169
Query: 537 RIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI- 595
++W + + + ++ + C A N+ G T+ I
Sbjct: 170 IVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTID 225
Query: 596 -----------------------CKV----LTVIVEWFYNGKKLPHGHRYR------TFH 622
CK + W K L G+ +
Sbjct: 226 LNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT 285
Query: 623 DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLE 682
I+ + ++G Y C ++
Sbjct: 286 MIRILFAFVSSVARNDTGYYTCSSSKHPSQ------------------------------ 315
Query: 683 KIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVE 742
+A + E I S ++ + E F R P+++
Sbjct: 316 -------SALVTIVEKGFINA-------TNSSEDYEIDQYEEFCFSVR--FKAYPQIRCT 359
Query: 743 WFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
W ++ K + + + G+Y A ND + ++ ++ K
Sbjct: 360 WTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRK 415
Query: 803 RSIILE-------------------------------------------SQLPKGMEVFI 819
++ E ++ G V
Sbjct: 416 PQVLAEASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSS 475
Query: 820 SFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 865
S +S C AYN G + + + G I +
Sbjct: 476 STLNMSEA--IKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGG 519
Score = 165 bits (418), Expect = 6e-43
Identities = 62/483 (12%), Positives = 122/483 (25%), Gaps = 115/483 (23%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
Q V + ++ S + + N+ W L + F + + G
Sbjct: 47 QSSGTVYEAAAV-EVDVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHF-DLQNRGV 102
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
V+M + +GEYL + +
Sbjct: 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVS-------------------------- 136
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGH- 1601
+ ++ + + E + A C P P V W++
Sbjct: 137 ----------------IRNTLLYTLRRPYFRKMENQDALVC-ISESVPEPIVEWVLCDSQ 179
Query: 1602 -TIVNEIVRKITATETTEME-------------HKGKIQERVVDASEKPAKPPVFTKKIQ 1647
E + E + G+ R+ P T +
Sbjct: 180 GESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQ--TPQTT--LP 235
Query: 1648 PCRAFEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFSTK------SILIMR 1700
+ + + + W E+ + F++ T+ST +
Sbjct: 236 QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVS 295
Query: 1701 QVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLA 1760
V D+G + + + SA + + EK G + + I+ +
Sbjct: 296 SVARNDTGYYTCSSSKHPSQ---SALVTIVEK-----GFINATNSSEDYE---IDQYEEF 344
Query: 1761 RFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNN 1820
F + A + W + K + + DN +++ G Y A N+
Sbjct: 345 CFSVRFKAYPQIRCTWTFSRKSFPCEQKG----LDNGYSISKFCNHKHQPGEYIFHAEND 400
Query: 1821 AGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ L ++ K P V + E SA C G
Sbjct: 401 DAQFTKMFTLNIRRK-------------------PQV--------LAEASASQASCFSDG 433
Query: 1881 KPR 1883
P
Sbjct: 434 YPL 436
Score = 155 bits (393), Expect = 8e-40
Identities = 56/591 (9%), Positives = 128/591 (21%), Gaps = 129/591 (21%)
Query: 273 EDSGIYT---VKATNSKGSATTSGTLKCL------ERLFVNHNYPLFSLQFQHLSNLSEG 323
+D + + N+ S S + + + + + +
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVE-VDVS 63
Query: 324 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 383
+ ++ ++ +++ + + G+V + IL G Y
Sbjct: 64 ASITLQ--VLVDAPGNISCLWVFKHSSLNCQPHFDLQN-RGVVSMVILKMTETQAGEYLL 120
Query: 384 RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKV 443
++ I + + +T +++ D+ C + PE V
Sbjct: 121 FIQSEATNYTILFTVSIRN-----TLLYTLRRPYFRKMENQDA--LVCI--SESVPEPIV 171
Query: 444 EWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQ 503
EW V + + + C A N +F
Sbjct: 172 EWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGREC-TRLFTIDL 226
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK------TVY 557
+ P + L + + C+ + + W + G+ +
Sbjct: 227 NQTPQTTLPQLFLKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRT 285
Query: 558 DFGFISLDMDYVYARDSGEYICRATNKWGTAMT------------------------KAK 593
+ + V D+G Y C ++ + +
Sbjct: 286 MIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFC 345
Query: 594 VICKV---LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
+ + W ++ K P + + + I + G Y A N
Sbjct: 346 FSVRFKAYPQIRCTWTFSRKSFPCEQKGLD-NGYSISKFCNH---KHQPGEYIFHAENDD 401
Query: 651 GSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFT 710
T+ + R+ P
Sbjct: 402 AQF------------------------------------------TKMFTLNIRRKPQVL 419
Query: 711 VPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR-----------FRTF 759
E + P W + R
Sbjct: 420 A---------EASASQASCFSD--GYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKV 468
Query: 760 CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 810
++ C AYN G + + + G I +
Sbjct: 469 FGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPGPFPFIQDGG 519
Score = 154 bits (389), Expect = 3e-39
Identities = 62/616 (10%), Positives = 131/616 (21%), Gaps = 175/616 (28%)
Query: 1252 PEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFI 1311
PE++ P+ + E +V V + + + V+ + + F
Sbjct: 37 PEDLGCALRPQSSG-TVYEAAAVEVDVSASITLQVLVDAPGNISCL--------WVFKHS 87
Query: 1312 NISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
+++ + + G VS+ I + GEY+ ++
Sbjct: 88 SLNCQPHF------------DLQNRGVVSMVILKMTETQAGEYLLFIQSEATNY------ 129
Query: 1372 SCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQI 1431
T ++ + + +
Sbjct: 130 ----------------------------------TILFTVSI--------RNTLLYT--L 145
Query: 1432 KTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVY 1491
+ C P VEW L V ++
Sbjct: 146 RRPYFRKMENQDALVCI--SESVPEPIVEWVLCDSQGE----SCKEESPAVVKKEEKVLH 199
Query: 1492 PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPE 1551
+ C A N G + TR
Sbjct: 200 ELFGTDIRCCARNELGRECTRLFTIDL--------------------------------- 226
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRK 1610
+ P ++ GEP C V + W + + +
Sbjct: 227 --------NQTPQTTLPQLF--LKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFE 276
Query: 1611 ITATETTEMEHKG---KIQE-RVVD-------ASEKPAK--------PPVF--TKKIQPC 1649
++ T + + D +S+ P++ T +
Sbjct: 277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDY 336
Query: 1650 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 1709
+ ++ F V F P W + +S + G
Sbjct: 337 EIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGYS----ISKFCNHKHQPGE 392
Query: 1710 FAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT 1769
+ AEN + L + P L ++
Sbjct: 393 YIFHAENDDAQFTKMFTLNIR----------RKPQVLAE--------ASASQASCFSDGY 434
Query: 1770 KPLDVYWLK-------NGKKIIPDIRYKTLEED----NLFTLLIIEAVVEDSGAYECVAM 1818
W K ++I + + + + + + +C A
Sbjct: 435 PLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAY 494
Query: 1819 NNAGEARCEAELVVQS 1834
N+ G + L
Sbjct: 495 NSLGTSCETILLNSPG 510
Score = 152 bits (385), Expect = 9e-39
Identities = 68/536 (12%), Positives = 125/536 (23%), Gaps = 116/536 (21%)
Query: 104 LVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
L S + VE + ++ V+ + W
Sbjct: 44 LRPQSSGTVYEAAAVEVDVSASITLQVLVDAP-------------------GNISCLWVF 84
Query: 164 NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGY 223
+ + + + ++ I + +GEY+ F+ + A
Sbjct: 85 KHSSLNCQPHFDLQNRGVVSMV-ILKMTETQAGEYLL--FIQS---EATNYTILFTVSIR 138
Query: 224 VALDIELMLKTLV-----------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALD 266
L L P EW + + + V +
Sbjct: 139 NTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQG----ESCKEESPAVVKKE 194
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIA 326
+ A N G T RLF L L GE
Sbjct: 195 EKVLHELFGTDIRCCARNELGRECT--------RLFTIDLNQTPQTTLPQLF-LKVGEPL 245
Query: 327 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIR------TVHAFGMVVLEILGTKIEDTGV 380
+ + + K +E + ++ + DTG
Sbjct: 246 WIRCK-AVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGY 304
Query: 381 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE 440
YTC ++ Q S + V+K + + + + F P+
Sbjct: 305 YTCSSSKHPSQ---SALVTIVEKGFINATNSSEDYEIDQ----YEEFCFSVRFKA--YPQ 355
Query: 441 LKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF---------- 490
++ W + K K + + + H GEY+ A N+
Sbjct: 356 IRCTWTFSRKSF--PCEQKGLDNGY--SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN 411
Query: 491 IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG 550
I P Q+ + EA C + P W
Sbjct: 412 IRRKP-------QV-----------LAEASASQASCFSD--GYPLPSWTWKKCSDKSPNC 451
Query: 551 SRV-----------KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+ + V+ S ++ A C A N GT+ +
Sbjct: 452 TEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGTSCETILLN 507
Score = 149 bits (377), Expect = 1e-37
Identities = 58/518 (11%), Positives = 117/518 (22%), Gaps = 122/518 (23%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
V A N+ W L+ + G+V++ I + + Y +
Sbjct: 70 VLVDAPGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATN 128
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
T+ + ++ ++
Sbjct: 129 YTILFTVS------------------------------------IRNTLLYTLRRPYFRK 152
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
EN++ C E + PE VEW
Sbjct: 153 MENQDA-LVCISE-------------------SVPEPIVEWVLCDSQGESCKE----ESP 188
Query: 181 GFVVMDIAYVQSHDSGEYVCQ------------WFVNNKPLPAGAKFKTTHDFG-YVALD 227
V + + + C + ++ P + G + +
Sbjct: 189 AVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIR 248
Query: 228 IELMLKTLVPFTEWFVNNKPLPAGAKFKTT------HDFGYVALDIVGAYAEDSGIYTVK 281
+ + W + NK L G F+ + + + D+G YT
Sbjct: 249 CKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCS 308
Query: 282 ATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMT 341
++ S + +E+ F+N + + E F +
Sbjct: 309 SSKHPSQ---SALVTIVEKGFINATNSSEDYEID------QYEEFCFSVR--FKAYPQIR 357
Query: 342 VEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 401
+ ++ K + + G Y A N Q L +
Sbjct: 358 CTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLN-I 412
Query: 402 DKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK---------PI 452
+ P+ + ++ C P W
Sbjct: 413 R----RKPQVLAE---------ASASQASCFSD--GYPLPSWTWKKCSDKSPNCTEEITE 457
Query: 453 FHKNRVKMVSDFGFVVMD--IAYVQSHDSGEYVCRAWN 488
NR FG V + ++ C A+N
Sbjct: 458 GVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYN 495
Score = 131 bits (331), Expect = 7e-32
Identities = 71/525 (13%), Positives = 144/525 (27%), Gaps = 114/525 (21%)
Query: 637 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRT 696
++ V +C N +D + ++ + S+ PE + L
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGK-----SSSYPMVSESPEDLGCALR-------------- 45
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF 756
Q+ + ++ + + ++ + W + + F
Sbjct: 46 -------PQSSGTVYEAAAVE-VDVSASITL--QVLVDAPGNISCLWVFKHSSLNCQPHF 95
Query: 757 RTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGME 816
+ G V + I + G+Y ++ ++ ++ L + ME
Sbjct: 96 DLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME 154
Query: 817 VFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDK 876
+ IS PE + GE+ S V K +L I
Sbjct: 155 NQDALVCISESVPEP--IVEWVLCDSQGESCKEESPAVVKKEEKVLHELF----GTDIRC 208
Query: 877 IAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHF 936
A E G E DL + P+ L + E
Sbjct: 209 CARNEL-------------------GRECTRLFTIDLNQTPQTTLPQLFLKVGEP--LWI 247
Query: 937 ECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI------LEINDVYLRDSGLYT 990
C+ + + W KAL G+ + ++ V D+G YT
Sbjct: 248 RCK-AVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYT 306
Query: 991 CKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEK 1050
C ++ ++ +T+ + I+
Sbjct: 307 CSSSKHPSQSAL---VTIVEKGFINATNS------------------------------- 332
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
++ ++ + + F K+ P +R W F+ + F + D G
Sbjct: 333 ----------SEDYEIDQYEEFCFSV--RFKAYPQIRCTWTFSRKSFPCEQK---GLDNG 377
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTE 1155
+ S+ + GEYI A N + + K ++ E
Sbjct: 378 Y-SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAE 421
Score = 109 bits (274), Expect = 1e-24
Identities = 68/576 (11%), Positives = 128/576 (22%), Gaps = 181/576 (31%)
Query: 549 TGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT------------------ 590
TG++ V I+ + S Y + +
Sbjct: 2 TGNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVD 61
Query: 591 ---KAKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 644
+ V + W + L + + G+V + IL E +G Y
Sbjct: 62 VSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNR-GVVSMVILKMTETQAGEYLL 120
Query: 645 RATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHR 704
++ + T + R
Sbjct: 121 FIQSEATNY------------------------------------------TILFTVSIR 138
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTP--TDDPKLKVEWFWNGKPMKTGSRFRTFCDF 762
++T+ E ++A L P+ VEW ++
Sbjct: 139 NTLLYTLRRPYF-RKMENQDA-----LVCISESVPEPIVEWVLCDSQGESCKEESPA--- 189
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSA-SMKVQGKRSIILES------------ 809
V E ++ C A N+ G T ++ + L
Sbjct: 190 -VVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIR 248
Query: 810 -------------------QLPKGMEVFISFHE------------ISPVYPEDCGQYSCR 838
L +G +S + +S V D G Y+C
Sbjct: 249 CKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCS 308
Query: 839 AYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE----GYGH-----ERED 889
+ SA + + K I + + E + Y
Sbjct: 309 SSKHPS---QSALVTIVEKGFINATNS-SEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSR 364
Query: 890 RTI--DKIAELEGYGHEREDRIEEDLGK----------------------APEFLTTPTD 925
++ ++ GY + + G+ P+ L +
Sbjct: 365 KSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEASA 424
Query: 926 LTLAESTLAHFECRLTPTNDPSMTVEWFH-------NGKALSAGSRIKTINDFGF----V 974
C P + W + ++ G + N F
Sbjct: 425 SQA--------SCFS--DGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVS 474
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
+N L C A N G + + L G
Sbjct: 475 SSTLNMSEAIKGFLVKCCAYNSLGTSCETILLNSPG 510
Score = 101 bits (252), Expect = 5e-22
Identities = 57/428 (13%), Positives = 102/428 (23%), Gaps = 120/428 (28%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P +EW +V L C A N LG +
Sbjct: 166 VPEPIVEWVLCDSQGESCKEESP----AVVKKEEKVLHELFGTDIRCCARNELGRECT-- 219
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
R + ++ + +P L + K E
Sbjct: 220 ------RLFTID---------------------------LNQTPQT--TLPQLFLKVGEP 244
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
+ C+ + + W K + N +M + M
Sbjct: 245 LWIRCKAVHV------------------NHGFGLTWELENKALEEGNYFEMSTYSTNRTM 286
Query: 186 D------IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT-HDFGYVAL-----DIELMLK 233
++ V +D+G Y C + T + G++ D E+
Sbjct: 287 IRILFAFVSSVARNDTGYYTCS--SSKH---PSQSALVTIVEKGFINATNSSEDYEIDQY 341
Query: 234 TLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKA 282
F+ W + K P + D GY + + G Y A
Sbjct: 342 EEFCFSVRFKAYPQIRCTWTFSRKSFPCE---QKGLDNGYS-ISKFCNHKHQPGEYIFHA 397
Query: 283 TNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPV----- 335
N T TL + P L+E + + P+
Sbjct: 398 ENDDAQFTKMFTLNIRRK-------PQV---------LAEASASQASCFSDGYPLPSWTW 441
Query: 336 ----GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 391
E + G ++R L + ++ + C A N G
Sbjct: 442 KKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNM--SEAIKGFLVKCCAYNSLGT 499
Query: 392 AEISVNLE 399
+ ++ L
Sbjct: 500 SCETILLN 507
Score = 84.0 bits (207), Expect = 2e-16
Identities = 20/184 (10%), Positives = 48/184 (26%), Gaps = 27/184 (14%)
Query: 1705 EDSGVFAVIAENRG----GKAKCSANLVVEEKRQGGRGGVVP--PSFLTTISSAVINVGQ 1758
+D V + N K S+ +V E + + P + ++ ++V
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVDVSA 64
Query: 1759 LARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAM 1818
+ A + W+ + + L+ + +++I++ +G Y
Sbjct: 65 SITLQVLVDAPGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLLFIQ 123
Query: 1819 NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRI 1878
+ A + ++ E L C
Sbjct: 124 SEATNYTILFTVSIR-------------------NTLLYTLRRPYFRKMENQ-DALVCIS 163
Query: 1879 TGKP 1882
P
Sbjct: 164 ESVP 167
Score = 80.9 bits (199), Expect = 2e-15
Identities = 36/327 (11%), Positives = 77/327 (23%), Gaps = 104/327 (31%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV------TLSINSLRADDSAIYTCKATN 56
+ + W L G+ + ++S+ +D+ YTC ++
Sbjct: 252 VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSK 311
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLN 116
+ + I ++ I +
Sbjct: 312 HPS---QSALVTIVEK-------------GFINATNSSE--------------------- 334
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
D E + E F R + P+++ W + K K
Sbjct: 335 DYEIDQYEEFCFSVRFKA-------------------YPQIRCTWTFSRKSF--PCEQKG 373
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIE-----LM 231
+ + + H GEY+ N K L+I L
Sbjct: 374 LDNGY--SISKFCNHKHQPGEYIFH--AEND---DAQFTKMFT------LNIRRKPQVLA 420
Query: 232 LKTLVPFT-----------EWF-------VNNKPLPAGAKFKTTHDFGY----VALDIVG 269
+ + W + + G + + + + +
Sbjct: 421 EASASQASCFSDGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNM 480
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLK 296
+ A + A NS G++ + L
Sbjct: 481 SEAIKGFLVKCCAYNSLGTSCETILLN 507
Score = 57.8 bits (139), Expect = 2e-08
Identities = 10/108 (9%), Positives = 31/108 (28%), Gaps = 4/108 (3%)
Query: 1050 KPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF 1109
+P + ++V + + ++ + + W F + +
Sbjct: 45 RPQSSGTVYEAAA-VEVDVSASITLQVLVD--APGNISCLWVFKHSSLNCQPHFD-LQNR 100
Query: 1110 GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQ 1157
G +S+ + + +GEY+ ++ V +
Sbjct: 101 GVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRP 148
Score = 52.4 bits (125), Expect = 1e-06
Identities = 22/200 (11%), Positives = 43/200 (21%), Gaps = 70/200 (35%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
S+ + GEY+ A ND + T+ +
Sbjct: 379 SISKFCNHKHQPGEYIFHAENDDAQFTKMFTL------------NI-------------- 412
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
++ P+ + E +++ C G P
Sbjct: 413 ----------------------RRKPQVL---------AEASASQASCFSD--GYPLPSW 439
Query: 1460 EWFLNGKPLPH-----------KNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGM 1508
W P+ + ++ + C A N G
Sbjct: 440 TWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLGT 499
Query: 1509 DETRAILKTTGKPGIIYESQ 1528
+L + G I +
Sbjct: 500 SCETILLNSPGPFPFIQDGG 519
Score = 46.2 bits (109), Expect = 8e-05
Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 11/80 (13%)
Query: 1808 EDSGAYECVAM----NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKD 1863
+D +CV + N++ + + +V P + ++
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSES-------PEDLGCALRPQSSGTVYEAAA 57
Query: 1864 QNVKEGSAVTLKCRITGKPR 1883
V +++TL+ +
Sbjct: 58 VEVDVSASITLQVLVDAPGN 77
Score = 45.1 bits (106), Expect = 2e-04
Identities = 15/78 (19%), Positives = 25/78 (32%), Gaps = 11/78 (14%)
Query: 4 RADPNLKIEWFKNG---------VPLSLGSRIRSTFDFG--LVTLSINSLRADDSAIYTC 52
P W K + + +R + FG + + ++N A + C
Sbjct: 432 DGYPLPSWTWKKCSDKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKC 491
Query: 53 KATNLLGEAVSTCTLKIE 70
A N LG + T L
Sbjct: 492 CAYNSLGTSCETILLNSP 509
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A
2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Length = 212
Score = 158 bits (401), Expect = 6e-44
Identities = 50/205 (24%), Positives = 77/205 (37%), Gaps = 9/205 (4%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF--STKS 1695
PP FT+ A F + GDP P I W ++ +++ I S
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
+ I D ++ +A N G+ S L V + Q RG P+ V+
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRG---FPTIDMGPQLKVVE 121
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPD---IRYKTLEEDNLFTLLIIEAVVEDSGA 1812
+ A S ++ W K+ + R K L +++ L I ++ D G
Sbjct: 122 RTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGK 181
Query: 1813 YECVAMNNAGEAR-CEAELVVQSKK 1836
YECVA N+AG A L V+ K
Sbjct: 182 YECVATNSAGTRYSAPANLYVRGTK 206
Score = 133 bits (336), Expect = 3e-35
Identities = 54/231 (23%), Positives = 76/231 (32%), Gaps = 45/231 (19%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI-NDFGF 973
P F TP D T +A F C+ T DP + W GK +S +D
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSG 62
Query: 974 VILEINDVYL-RDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
+L I + RD +Y C A+N GE + S +LTV
Sbjct: 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLR---------------------- 100
Query: 1033 KLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF 1092
D+ P Q V C +P I WF
Sbjct: 101 -------------EDQIPRGFPTIDMGPQL-KVVERTRTATMLCA--ASGNPDPEITWFK 144
Query: 1093 NGRPFATGS---RVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT 1140
+ P T + R+K + +L ++ D G+Y C ATN GT +
Sbjct: 145 DFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYS 195
Score = 124 bits (314), Expect = 3e-32
Identities = 42/209 (20%), Positives = 68/209 (32%), Gaps = 33/209 (15%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET 1616
E + P F P Q G A F + TG PRP+++W G + N+ I +
Sbjct: 1 ETGETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDG 60
Query: 1617 T---------------------------EMEHKGKIQERVVDASEKPAKPPVFTKKIQPC 1649
+ E+ ++ V+ + P P Q
Sbjct: 61 SGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLT--VLREDQIPRGFPTIDMGPQLK 118
Query: 1650 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD---FQIHTFSTKSILIMRQVFMED 1706
A G+P P I WF++ P+ +S + + + L + Q D
Sbjct: 119 VVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESD 178
Query: 1707 SGVFAVIAENRGGKAK-CSANLVVEEKRQ 1734
G + +A N G ANL V +
Sbjct: 179 QGKYECVATNSAGTRYSAPANLYVRGTKH 207
Score = 118 bits (297), Expect = 5e-30
Identities = 34/145 (23%), Positives = 51/145 (35%), Gaps = 14/145 (9%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
PP F T G +A F + + + W K GKK+ +D ++
Sbjct: 5 TPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSV 64
Query: 1801 LIIEAV--VEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L I+ + D YECVA NN GE L V + PT+
Sbjct: 65 LRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQI------------PRGFPTID 112
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
+ + V+ T+ C +G P
Sbjct: 113 MGPQLKVVERTRTATMLCAASGNPD 137
Score = 101 bits (253), Expect = 4e-24
Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 44/208 (21%)
Query: 603 VEWFYNGKKLPHGHRYRT-FHDFGIVILDIL-YCYEENSGVYECRATNKYGSDVTKASLK 660
+ W GKK+ + F D +L I + +YEC A+N G L
Sbjct: 38 IVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLT 97
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
+ + + R P + +
Sbjct: 98 VLREDQI-----------------------------------PRGFPTIDMGPQLKV-VE 121
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS---RFRTFCDFGFVILEISPVYPEDC 777
A + +P ++ WF + P+ T + R + L+I D
Sbjct: 122 RTRTATMLCA--ASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQ 179
Query: 778 GQYSCRAYNDYGEAVT-SASMKVQGKRS 804
G+Y C A N G + A++ V+G +
Sbjct: 180 GKYECVATNSAGTRYSAPANLYVRGTKH 207
Score = 99.9 bits (249), Expect = 1e-23
Identities = 40/200 (20%), Positives = 59/200 (29%), Gaps = 53/200 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLR-ADDSAIYTCKATNLLGEAVS 63
DP KI W K G +S F D L I LR D AIY C A+N +GE
Sbjct: 33 DPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISV 92
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
+ L + E ++ P +
Sbjct: 93 STRLTV-----------------------------LREDQIPRGFPTIDMGPQLKVVERT 123
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN---RVKMVSDF 180
C G +P+ ++ WF + P+ N R+K +
Sbjct: 124 RTATMLCAAS---------G----------NPDPEITWFKDFLPVDTSNNNGRIKQLRSE 164
Query: 181 GFVVMDIAYVQSHDSGEYVC 200
+ I + D G+Y C
Sbjct: 165 SIGALQIEQSEESDQGKYEC 184
Score = 97.6 bits (243), Expect = 7e-23
Identities = 36/183 (19%), Positives = 52/183 (28%), Gaps = 42/183 (22%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG- 1481
PPRF DQ F CQ GDP K+ W GK + ++ +D G
Sbjct: 6 PPRFTRTP--VDQTGVSGGVASFICQA--TGDPRPKIVWNKKGKKVSNQRFEVIEFDDGS 61
Query: 1482 -YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
V P D Y C A+N G L +
Sbjct: 62 GSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLRED------------------- 102
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLING 1600
+ P+ P P+ + V+ A +G P P + W +
Sbjct: 103 ----------------QIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDF 146
Query: 1601 HTI 1603
+
Sbjct: 147 LPV 149
Score = 96.0 bits (239), Expect = 3e-22
Identities = 36/198 (18%), Positives = 55/198 (27%), Gaps = 59/198 (29%)
Query: 820 SFHEISPVY-PEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIA 878
S I P+ P D Y C A N+ GE S + V +
Sbjct: 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLRE--------------------- 101
Query: 879 ELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFEC 938
++ P P + + A C
Sbjct: 102 -------------------------------DQIPRGFPTIDMGPQLKVVERTRTATMLC 130
Query: 939 RLTPTNDPSMTVEWFHNGKALSAGS---RIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
+ +P + WF + + + RIK + L+I D G Y C ATN
Sbjct: 131 A--ASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATN 188
Query: 996 KHGEA-TTSCKLTVKGRQ 1012
G + L V+G +
Sbjct: 189 SAGTRYSAPANLYVRGTK 206
Score = 95.7 bits (238), Expect = 4e-22
Identities = 49/203 (24%), Positives = 69/203 (33%), Gaps = 33/203 (16%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH-KNRVKMVSDFGF 466
PP+FT G+ G A F C T DP K+ W GK + + + V D
Sbjct: 6 PPRFTRTPVDQTGV-SGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSG 62
Query: 467 VVMDIAYVQS-HDSGEYVCRAWNNF---------------IFIPPFPIFIFHQIRLPSPS 510
V+ I +++ D Y C A NN FP P
Sbjct: 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMG------PQ 116
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGS---RVKTVYDFGFISLDMD 567
V C +P I WF + P T + R+K + +L ++
Sbjct: 117 --LKVVERTRTATMLCA--ASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIE 172
Query: 568 YVYARDSGEYICRATNKWGTAMT 590
D G+Y C ATN GT +
Sbjct: 173 QSEESDQGKYECVATNSAGTRYS 195
Score = 93.7 bits (233), Expect = 2e-21
Identities = 37/184 (20%), Positives = 59/184 (32%), Gaps = 14/184 (7%)
Query: 237 PFTEWFVNNKPLPAGAKFKTT-HDFGYVALDIVGAY-AEDSGIYTVKATNSKGSATTSGT 294
P W K + D L I D IY A+N+ G + S
Sbjct: 36 PKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTR 95
Query: 295 LKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS 354
L L + +P + Q + A + G+ + + + P++ S
Sbjct: 96 LTVLREDQIPRGFPTIDMGPQLKV-VERTRTATMLCA--ASGNPDPEITWFKDFLPVDTS 152
Query: 355 ---HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECVDKSKGQPPK 410
RI+ + + + L+I ++ D G Y C ATN G NL V
Sbjct: 153 NNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLY-VR----GTKH 207
Query: 411 FTSH 414
H
Sbjct: 208 HHHH 211
Score = 84.9 bits (210), Expect = 2e-18
Identities = 50/272 (18%), Positives = 78/272 (28%), Gaps = 81/272 (29%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLR-----VECSLSTAFFFPFINIS 1314
E PPRF T F + PR P++ + S F + S
Sbjct: 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPR--PKIVWNKKGKKVSNQRFEVIEFDDGS 61
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
+ L P D+ Y C A N+ GE +
Sbjct: 62 GSVLRIQ----------------------PLRTPRDEAIYECVASNNVGEISVSTRL--- 96
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
T+ ++Q+P+G P Q
Sbjct: 97 ---TVLREDQIPRG-----------------------------------FPTIDMGP--Q 116
Query: 1435 DQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN---RFNPIYDFGYVAMNFGWV 1490
++VE ++ C G+P+ ++ WF + P+ N R + A+
Sbjct: 117 LKVVERTRTATMLCA--ASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQS 174
Query: 1491 YPEDSGEYLCRATNLYGMDETR-AILKTTGKP 1521
D G+Y C ATN G + A L G
Sbjct: 175 EESDQGKYECVATNSAGTRYSAPANLYVRGTK 206
Score = 83.7 bits (207), Expect = 6e-18
Identities = 43/205 (20%), Positives = 64/205 (31%), Gaps = 54/205 (26%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT-FCDFGF 764
P FT + G A F + T DP+ K+ W GK + F D
Sbjct: 6 PPRFTRTPVDQT-GVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSG 62
Query: 765 VILEISPVY-PEDCGQYSCRAYNDYGEAVTSASMKVQGK--------------------- 802
+L I P+ P D Y C A N+ GE S + V +
Sbjct: 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVER 122
Query: 803 -RSIILESQ---LPK--------GMEVFISFH---------------EISPVYPEDCGQY 835
R+ + P + V S + +I D G+Y
Sbjct: 123 TRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKY 182
Query: 836 SCRAYNDYGEAVT-SASMKVQGKRS 859
C A N G + A++ V+G +
Sbjct: 183 ECVATNSAGTRYSAPANLYVRGTKH 207
Score = 83.3 bits (206), Expect = 7e-18
Identities = 35/188 (18%), Positives = 54/188 (28%), Gaps = 43/188 (22%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG--FISLDMDYVY 570
+ G F C+ DP +I W G+ + +D G +
Sbjct: 15 DQTGVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRT 72
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI--------------------------------CKV 598
RD Y C A+N G ++ C
Sbjct: 73 PRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAA 132
Query: 599 L---TVIVEWFYNGKKL---PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
+ WF + + + R + I L I E + G YEC ATN G+
Sbjct: 133 SGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGT 192
Query: 653 DVT-KASL 659
+ A+L
Sbjct: 193 RYSAPANL 200
Score = 74.9 bits (184), Expect = 6e-15
Identities = 40/214 (18%), Positives = 60/214 (28%), Gaps = 54/214 (25%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F D F C+ G DP K+ W GK +
Sbjct: 7 PRFTRTPVDQTGVSGGVASFICQAT---------G----------DPRPKIVWNKKGKKV 47
Query: 169 FH-KNRVKMVSDFGFVVMDIAYVQS-HDSGEYVCQWFVNNKPLPAGAKFKTTH------- 219
+ + V D V+ I +++ D Y C +N G +T
Sbjct: 48 SNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECV--ASNN---VGEISVSTRLTVLRED 102
Query: 220 DFGYVALDIELMLKTLV------------------PFTEWFVNNKPLPAGAK---FKTTH 258
I++ + V P WF + P+ K
Sbjct: 103 QIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLR 162
Query: 259 DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
AL I + D G Y ATNS G+ ++
Sbjct: 163 SESIGALQIEQSEESDQGKYECVATNSAGTRYSA 196
Score = 66.8 bits (163), Expect = 3e-12
Identities = 22/94 (23%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG-- 1110
PP FT D G F C+ DP +I W G+ + +D G
Sbjct: 6 PPRFTRTPVD-QTGVSGGVASFICQAT--GDPRPKIVWNKKGKKVSNQRFEVIEFDDGSG 62
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ RD Y C A+N G ++
Sbjct: 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRL 96
Score = 64.8 bits (158), Expect = 2e-11
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 4/75 (5%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGS---RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLL 58
+P+ +I WFK+ +P+ + RI+ + L I D Y C ATN
Sbjct: 131 AASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSA 190
Query: 59 GEAVS-TCTLKIEDR 72
G S L +
Sbjct: 191 GTRYSAPANLYVRGT 205
Score = 52.5 bits (126), Expect = 2e-07
Identities = 19/123 (15%), Positives = 33/123 (26%), Gaps = 36/123 (29%)
Query: 1255 IEEDEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV------DPRLRVECSLST 1304
+ ED+IP P + V+ +P + P
Sbjct: 99 LREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLP---------- 148
Query: 1305 AFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
++ S + +L I+ DQG+Y C A N G
Sbjct: 149 ------VDTSNNNGRI----------KQLRSESIGALQIEQSEESDQGKYECVATNSAGT 192
Query: 1365 AFT 1367
++
Sbjct: 193 RYS 195
Score = 42.9 bits (101), Expect = 4e-04
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ P DQ G + C+ TG PR
Sbjct: 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPR 35
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle
cytokine, CY receptor complex, extracellular complex;
HET: NAG; 4.30A {Homo sapiens}
Length = 423
Score = 165 bits (419), Expect = 6e-44
Identities = 51/433 (11%), Positives = 105/433 (24%), Gaps = 84/433 (19%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
Q V + + V S + N+ W L + F+ + + G
Sbjct: 47 QSSGTVYEAAAVEVDVS-ASITLQVL--VDAPGNISCLWVFKHSSLNCQPHFD-LQNRGV 102
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
V+M + +GEYL + +
Sbjct: 103 VSMVILKMTETQAGEYLLFIQSEATNYTILFTVS-------------------------- 136
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
+ ++ + + E + A C P P V W++
Sbjct: 137 ----------------IRNTLLYTLRRPYFRKMENQDALVC-ISESVPEPIVEWVLCDSQ 179
Query: 1603 IVNEIVRKITATETTEMEHKGKIQE-----------RVVDASEKPAKPPVFTKKIQPCRA 1651
+ + E R +
Sbjct: 180 GESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQLFL 239
Query: 1652 FEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFST------KSILIMRQVFM 1704
+ + + + W E+ + F++ T+ST + V
Sbjct: 240 KVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVAR 299
Query: 1705 EDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV--GQLARF 1762
D+G + + + SA + + E T SS + + F
Sbjct: 300 NDTGYYTCSSSKHPSQ---SALVTIVE----------KGFINATNSSEDYEIDQYEEFCF 346
Query: 1763 DAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG 1822
+ A + W + K + + DN +++ G Y A N+
Sbjct: 347 SVRFKAYPQIRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDA 402
Query: 1823 EARCEAELVVQSK 1835
+ L ++S
Sbjct: 403 QFTKMFTLNIRSG 415
Score = 155 bits (392), Expect = 2e-40
Identities = 57/483 (11%), Positives = 118/483 (24%), Gaps = 128/483 (26%)
Query: 376 EDTGVYTC----RATNKWGQAEISVNLECVDKSKG-------QPPKFTSHIKSLEGLKDG 424
+D V C N + S + + Q ++E +
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVE-VDVS 63
Query: 425 DSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 484
S + + + W + + + + G V M I + +GEY+
Sbjct: 64 ASITLQVLVDA--PGNISCLWVFKHSSLNCQPHFDLQNR-GVVSMVILKMTETQAGEYLL 120
Query: 485 RAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDP 534
+ I L P + C +S P
Sbjct: 121 FIQSEATNYTILFTVSIRNTLL-------YTLRRPYF----RKMENQDALVCI--SESVP 167
Query: 535 TMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 594
++W + + + ++ + C A N+ G T+
Sbjct: 168 EPIVEWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFT 223
Query: 595 I------------------------CKVLTVI----VEWFYNGKKLPHGHRYR------T 620
I CK + V + W K L G+ +
Sbjct: 224 IDLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283
Query: 621 FHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGG 680
I+ + ++G Y C ++
Sbjct: 284 RTMIRILFAFVSSVARNDTGYYTCSSSKHPSQ---------------------------- 315
Query: 681 LEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNID-DLREGENAHFEARLTPTDDPKL 739
+A + E S+ D ++ + E F R P++
Sbjct: 316 ---------SALVTIVE--------KGFINATNSSEDYEIDQYEEFCFSVRFKA--YPQI 356
Query: 740 KVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
+ W ++ K + D G+ + + G+Y A ND + ++ +
Sbjct: 357 RCTWTFSRKSFPCEQKGL---DNGYS-ISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNI 412
Query: 800 QGK 802
+
Sbjct: 413 RSG 415
Score = 149 bits (377), Expect = 2e-38
Identities = 58/373 (15%), Positives = 105/373 (28%), Gaps = 51/373 (13%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W + L F + G V++ I+ +G Y + + + T T+
Sbjct: 77 NISCLWVFKHSSLNCQPHFDLQNR-GVVSMVILKMTETQAGEYLLFIQSEATNYTILFTV 135
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
L P F E + A I VE++ E+
Sbjct: 136 SIRNTLLYTLRRPYFR--------KMENQDA-LVC--ISESVPEPIVEWVLCDSQGESCK 184
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHI 415
+V E C A N+ G+ + + + +
Sbjct: 185 EES----PAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDL------NQTPQTTL 234
Query: 416 KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV------SDFGFVVM 469
L LK G+ C VN + W K + N +M + +
Sbjct: 235 PQLF-LKVGEPLWIRCKAVHVN-HGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFA 292
Query: 470 DIAYVQSHDSGEYVCRAWNNF-------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKV 522
++ V +D+G Y C + + I F S ++ ++ + +
Sbjct: 293 FVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINAT--------NSSEDYEIDQYEEF 344
Query: 523 HFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRAT 582
F R + P +R W F+ + F + S+ + GEYI A
Sbjct: 345 CFSVRFKA--YPQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAE 398
Query: 583 NKWGTAMTKAKVI 595
N +
Sbjct: 399 NDDAQFTKMFTLN 411
Score = 145 bits (366), Expect = 4e-37
Identities = 43/439 (9%), Positives = 103/439 (23%), Gaps = 83/439 (18%)
Query: 273 EDSGIYTVKATNSKGSATT---SGTLKCLER------LFVNHNYPLFSLQFQHLSNLSEG 323
+D + N K + ++ S + + + + + +
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVE-VDVS 63
Query: 324 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 383
+ + ++ +++ + + G+V + IL G Y
Sbjct: 64 ASITLQV--LVDAPGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLL 120
Query: 384 RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKV 443
++ I + S +T +++ D+ C + PE V
Sbjct: 121 FIQSEATNYTILFTV-----SIRNTLLYTLRRPYFRKMENQDA--LVC--ISESVPEPIV 171
Query: 444 EWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF---------IFIP 494
EW V + + + C A N I +
Sbjct: 172 EWVLCDSQGESCKE----ESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLN 227
Query: 495 PFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK 554
P Q+ + + C+ + + W + G+ +
Sbjct: 228 QTPQTTLPQLF----------LKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFE 276
Query: 555 ------TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT------------------ 590
+ + V D+G Y C ++ +
Sbjct: 277 MSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDY 336
Query: 591 ------KAKVICKV---LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641
+ + + W ++ K P + + ++ G
Sbjct: 337 EIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGY----SISKFCNHKHQPGE 392
Query: 642 YECRATNKYGSDVTKASLK 660
Y A N +L
Sbjct: 393 YIFHAENDDAQFTKMFTLN 411
Score = 144 bits (363), Expect = 1e-36
Identities = 61/519 (11%), Positives = 135/519 (26%), Gaps = 114/519 (21%)
Query: 637 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRT 696
++ V +C N +D + ++ + S+ PE + L
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGK-----SSSYPMVSESPEDLGCALR-------------- 45
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF 756
Q+ + ++ + + + + + W + + F
Sbjct: 46 -------PQSSGTVYEAAAVE-VDVSASITLQVLVDAP--GNISCLWVFKHSSLNCQPHF 95
Query: 757 RTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGME 816
+ G V + I + G+Y ++ ++ ++ L
Sbjct: 96 DLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRP------ 148
Query: 817 VFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDK 876
E+ C + + + + + P ++
Sbjct: 149 --------YFRKMENQDALVCISE---SVPEPIVEWVLCDSQGESCKEESPAVVKKEEKV 197
Query: 877 IAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHF 936
+ EL G D A E G E DL TT L L
Sbjct: 198 LHELFG-----TDIRC--CARNE-LGRECTRLFTIDL--NQTPQTTLPQLFLKVGEPLWI 247
Query: 937 ECRLTPTNDPSMTVEWFHNGKALSAGSRIK------TINDFGFVILEINDVYLRDSGLYT 990
C+ + + W KAL G+ + + ++ V D+G YT
Sbjct: 248 RCKAV-HVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYT 306
Query: 991 CKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEK 1050
C ++ ++ +T+ +
Sbjct: 307 CSSSKHPSQSAL---VTIVEK--------------------------------------- 324
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
+ + ++ ++ + + F R + P +R W F+ + F +
Sbjct: 325 --GFINATNSSEDYEIDQYEEFCFSVRFKA--YPQIRCTWTFSRKSFPCEQKGLD----N 376
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
S+ + GEYI A N + ++
Sbjct: 377 GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415
Score = 135 bits (341), Expect = 7e-34
Identities = 49/457 (10%), Positives = 105/457 (22%), Gaps = 136/457 (29%)
Query: 474 VQSHDSGEYVCRAWNNFIFI----PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE 529
S Y + + P ++ ++V + + ++
Sbjct: 22 SSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEA--------AAVEVDVSASITLQVLVD 73
Query: 530 PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAM 589
+ + W F + + G +S+ + + +GEY+ ++
Sbjct: 74 --APGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYT 130
Query: 590 TKAKVI------------------------CKVLTV---IVEWFYNGKKLPHGHRYRTFH 622
V C +V IVEW +
Sbjct: 131 ILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEES--- 187
Query: 623 DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLE 682
+V + +E C A N+ G + T+
Sbjct: 188 -PAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFT----------------------- 223
Query: 683 KIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVE 742
L + L+ GE + + +
Sbjct: 224 --------------------IDLNQTPQTTLPQLF-LKVGEPLWIRCKAV-HVNHGFGLT 261
Query: 743 WFWNGKPMKTGSRFR------TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSAS 796
W K ++ G+ F + +S V D G Y+C + + SA
Sbjct: 262 WELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQ---SAL 318
Query: 797 MKVQGKRSIILESQ----------------------------------LPKGMEVFISFH 822
+ + K I + P + + +
Sbjct: 319 VTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCEQKGLDNGY 378
Query: 823 --EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+ G+Y A ND + ++ ++
Sbjct: 379 SISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRSG 415
Score = 134 bits (339), Expect = 1e-33
Identities = 48/437 (10%), Positives = 95/437 (21%), Gaps = 108/437 (24%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
V A N+ W L+ + G+V++ I + + Y +
Sbjct: 70 VLVDAPGNISCLWVFKHSSLNCQPHFDLQ-NRGVVSMVILKMTETQAGEYLLFIQSEATN 128
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
T+ I + ++
Sbjct: 129 YTILFTVSIRNT------------------------------------LLYTLRRPYFRK 152
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
EN++ C E + PE VEW
Sbjct: 153 MENQDA-LVCISE-------------------SVPEPIVEWVLCDSQGESCKE----ESP 188
Query: 181 GFVVMDIAYVQSHDSGEYVC-----------QWFVNNKPLPAGAKFKTTHDFGYVALDIE 229
V + + + C + F + ++ +
Sbjct: 189 AVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQTTLPQL----FLKVGEP 244
Query: 230 LMLKTLV------PFTEWFVNNKPLPAGAKFK------TTHDFGYVALDIVGAYAEDSGI 277
L ++ W + NK L G F+ + + D+G
Sbjct: 245 LWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGY 304
Query: 278 YTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGD 337
YT ++ + + +E+ F+N + + + E F
Sbjct: 305 YTCSSSKHPSQSAL---VTIVEKGFINATNSSEDYE------IDQYEEFCFSVR--FKAY 353
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+ + ++ K + + G Y A N Q
Sbjct: 354 PQIRCTWTFSRKSFPCEQKGLD----NGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFT 409
Query: 398 LECVDKSKGQPPKFTSH 414
L K H
Sbjct: 410 LNIRS-----GTKHHHH 421
Score = 131 bits (330), Expect = 2e-32
Identities = 60/480 (12%), Positives = 110/480 (22%), Gaps = 115/480 (23%)
Query: 34 LVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEK 93
L+ N S+ Y + + C L+ +
Sbjct: 14 LINHKNNDSSVGKSSSYPMVSESPEDLG---CALRPQ----------------------- 47
Query: 94 PKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVN 153
S + VE + ++ V+
Sbjct: 48 --------------SSGTVYEAAAVEVDVSASITLQVLVDAP------------------ 75
Query: 154 DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGA 213
+ W + + + + G V M I + +GEY+ F+ + A
Sbjct: 76 -GNISCLWVFKHSSLNCQPHFDLQNR-GVVSMVILKMTETQAGEYLL--FIQS---EATN 128
Query: 214 KFKTTHDFGYVALDIELMLKTLV-----------------PFTEWFVNNKPLPAGAKFKT 256
L L P EW + +
Sbjct: 129 YTILFTVSIRNTLLYTLRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGE----SCK 184
Query: 257 THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQH 316
V + + A N G T RLF
Sbjct: 185 EESPAVVKKEEKVLHELFGTDIRCCARNELGRECT--------RLFTIDLNQTPQTTLPQ 236
Query: 317 LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR------TVHAFGMVVLEI 370
L L GE + + + K +E + ++ +
Sbjct: 237 LF-LKVGEPLWIRCK-AVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFV 294
Query: 371 LGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFE 430
DTG YTC ++ Q S + V+K + + + + F
Sbjct: 295 SSVARNDTGYYTCSSSKHPSQ---SALVTIVEKGFINATNSSEDYE----IDQYEEFCFS 347
Query: 431 CTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
P+++ W + K K + + + H GEY+ A N+
Sbjct: 348 VRFKA--YPQIRCTWTFSRKSF--PCEQKGLDNGY--SISKFCNHKHQPGEYIFHAENDD 401
Score = 128 bits (322), Expect = 2e-31
Identities = 37/346 (10%), Positives = 84/346 (24%), Gaps = 60/346 (17%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTI-VNEIVRKITATETT- 1617
++ V + A +V V +W+ ++ +
Sbjct: 47 QSSGTVYEAAAVEVDVSASITLQVL-VDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSM 105
Query: 1618 -----EMEHKGK--------IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFD 1664
G+ + + ++T + R E +Q +
Sbjct: 106 VILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME-NQDALVCISE 164
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 1724
P P ++W D S + K ++ ++F D A N G+
Sbjct: 165 SVPEPIVEWVLCDSQGESCKEES-PAVVKKEEKVLHELFGTD---IRCCARNELGRECTR 220
Query: 1725 ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKNGKKI 1783
+ + + TT+ + VG+ K + W K +
Sbjct: 221 LFTI-----------DLNQTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKAL 269
Query: 1784 IPDIRYKTLEEDNLF------TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKA 1837
++ + D+G Y C + + ++ A + + K
Sbjct: 270 EEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQS---ALVTIVEK-- 324
Query: 1838 PGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+D + + R P+
Sbjct: 325 ---------------GFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355
Score = 124 bits (313), Expect = 4e-30
Identities = 50/492 (10%), Positives = 97/492 (19%), Gaps = 145/492 (29%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNF 1322
+ + E +V V + + + V+ + F +++
Sbjct: 47 QSSGTVYEAAAVEVDVSASITLQVLVDAPGNISCLW--------VFKHSSLNCQP----- 93
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
+ + G VS+ I + GEY+ ++ T+S + L
Sbjct: 94 -------HFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTL- 145
Query: 1383 NQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQS 1442
+ P F
Sbjct: 146 ----------------------------------------RRPYFR---------KMENQ 156
Query: 1443 TKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRA 1502
C P VEW L V ++ + C A
Sbjct: 157 DALVCI--SESVPEPIVEWVLCDSQGE----SCKEESPAVVKKEEKVLHELFGTDIRCCA 210
Query: 1503 TNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEA 1562
N G + TR
Sbjct: 211 RNELGRECTRLFTI-------------------------------------------DLN 227
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEH 1621
+ ++ GEP C V + W + + +++ T
Sbjct: 228 QTPQTTLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMI 287
Query: 1622 KG---KIQE-RVVD-------ASEKPAK--------PPVFTKKIQPCRAF--EQDQARFE 1660
+ + D +S+ P++ + ++ F
Sbjct: 288 RILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFS 347
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
V F P W + G + AEN +
Sbjct: 348 VRFKAYPQIRCTWTFSRKSFPCE----QKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQ 403
Query: 1721 AKCSANLVVEEK 1732
L +
Sbjct: 404 FTKMFTLNIRSG 415
Score = 100 bits (250), Expect = 4e-22
Identities = 51/555 (9%), Positives = 119/555 (21%), Gaps = 166/555 (29%)
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
+ ND + S Y + + C L +
Sbjct: 18 KNNDSSVGKSSSYPMVSESPED---LGCALRPQS-------------------------- 48
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 1096
+ ++V + + ++ + + W F
Sbjct: 49 -----------------SGTVYEAAA-VEVDVSASITLQVLVD--APGNISCLWVFKHSS 88
Query: 1097 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTES 1156
+ + G +S+ + + +GEY+ ++ V +
Sbjct: 89 LNCQPHFD-LQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTL-- 145
Query: 1157 QLPDSMSAEKLKELE---KNYTPEEIEEDEIPEEPPRLNQSRYKKQ--NQSAWYDSELSE 1211
+ P E L ++ +E + + + ++ ++
Sbjct: 146 RRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEKVLHELFGTD 205
Query: 1212 YQKERANESTELEKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEI 1271
+ NE + T +
Sbjct: 206 IRCCARNELGRECTRLFTI-------------------------------DLNQTPQTTL 234
Query: 1272 ESVTVQEAEPVRFETRVEPRVDPRLRVE-----CSLSTAFFFPFINISTAFLIFNFCLHA 1326
+ ++ EP+ + V+ + +L +F ST +
Sbjct: 235 PQLFLKVGEPLWIRCKA-VHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIR----- 288
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVP 1386
+ + V D G Y C + + + +
Sbjct: 289 -----------ILFAFVSSVARNDTGYYTCSSSKHPSQ-------------SALVTIVEK 324
Query: 1387 KGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFE 1446
++D ++ Q +F
Sbjct: 325 --------------------------------------GFINATNSSEDYEID-QYEEFC 345
Query: 1447 CQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLY 1506
+ P ++ W + K P + + D GY F + GEY+ A N
Sbjct: 346 FSVRFKAYPQIRCTWTFSRKSFPCEQKG---LDNGYSISKFC-NHKHQPGEYIFHAENDD 401
Query: 1507 GMDETRAILKTTGKP 1521
L
Sbjct: 402 AQFTKMFTLNIRSGT 416
Score = 86.7 bits (214), Expect = 1e-17
Identities = 20/187 (10%), Positives = 49/187 (26%), Gaps = 27/187 (14%)
Query: 1702 VFMEDSGVFAVIAENRG----GKAKCSANLVVEEKRQGGRGGVVP--PSFLTTISSAVIN 1755
+D V + N K S+ +V E + + P + ++ ++
Sbjct: 2 TGNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVD 61
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
V + A + W+ + + L+ + +++I++ +G Y
Sbjct: 62 VSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLL 120
Query: 1816 VAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLK 1875
+ A + +++ E L
Sbjct: 121 FIQSEATNYTILFTVSIRNT-------------------LLYTLRRPYFRKMENQ-DALV 160
Query: 1876 CRITGKP 1882
C P
Sbjct: 161 CISESVP 167
Score = 84.7 bits (209), Expect = 5e-17
Identities = 46/385 (11%), Positives = 87/385 (22%), Gaps = 122/385 (31%)
Query: 549 TGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT------------------ 590
TG++ V I+ + S Y + +
Sbjct: 2 TGNQDLPVIKCVLINHKNNDSSVGKSSSYPMVSESPEDLGCALRPQSSGTVYEAAAVEVD 61
Query: 591 ---KAKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 644
+ V + W + L + + G+V + IL E +G Y
Sbjct: 62 VSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFD-LQNRGVVSMVILKMTETQAGEYLL 120
Query: 645 RATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHR 704
++ + T + R
Sbjct: 121 FIQSEATNY------------------------------------------TILFTVSIR 138
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
++T+ + E ++A P+ VEW ++
Sbjct: 139 NTLLYTLRRPYFRKM-ENQDA-LVCI--SESVPEPIVEWVLCDSQGESCKEESPA-VVKK 193
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ--LPKGMEVFI--- 819
+ ++ D C A N+ G T + Q L G ++I
Sbjct: 194 EEKVLHELFGTD---IRCCARNELGRECTRLFTIDLNQTPQTTLPQLFLKVGEPLWIRCK 250
Query: 820 ---------------------------------------SFHEISPVYPEDCGQYSCRAY 840
F +S V D G Y+C +
Sbjct: 251 AVHVNHGFGLTWELENKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSS 310
Query: 841 NDYGEAVTSASMKVQGKRSIILESQ 865
+ SA + + K I +
Sbjct: 311 KHPSQ---SALVTIVEKGFINATNS 332
Score = 48.1 bits (114), Expect = 2e-05
Identities = 9/80 (11%), Positives = 25/80 (31%), Gaps = 11/80 (13%)
Query: 1808 EDSGAYECVAM----NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKD 1863
+D +CV + N++ + + +V P + ++
Sbjct: 5 QDLPVIKCVLINHKNNDSSVGKSSSYPMVSES-------PEDLGCALRPQSSGTVYEAAA 57
Query: 1864 QNVKEGSAVTLKCRITGKPR 1883
V +++TL+ +
Sbjct: 58 VEVDVSASITLQVLVDAPGN 77
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer,
immunoglobul domain, muscle protein, thick filament,
contractIle protein; 2.24A {Homo sapiens}
Length = 212
Score = 153 bits (389), Expect = 3e-42
Identities = 40/213 (18%), Positives = 69/213 (32%), Gaps = 26/213 (12%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKA 993
+T + V W HNG A+ R+KT + L+IN+ D G Y +
Sbjct: 20 IQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMEL 78
Query: 994 TNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNP 1053
+ + L+ + E Q + + EK
Sbjct: 79 FDGKTGHQKTVDLSGQAYDEAYAEFQ---------------------RLKQAAIAEKNRA 117
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF-GFI 1112
V L D + + E ++ C + DP + W N + A ++
Sbjct: 118 RVLG-GLPDVVTIQEGKALNLTCNV--WGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTA 174
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
++ V DSG+Y NK+G+ + V
Sbjct: 175 YFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 207
Score = 144 bits (364), Expect = 5e-39
Identities = 27/181 (14%), Positives = 46/181 (25%), Gaps = 12/181 (6%)
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 1724
+ W I S + + L + + D G + + + + +
Sbjct: 29 YVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKT 88
Query: 1725 ANLVVEE-----------KRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD 1773
+L + K+ I G+ + P +
Sbjct: 89 VDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPE 148
Query: 1774 VYWLKNGKKIIPDIRYK-TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
V WLKN K + E I DSG Y V N G + + V
Sbjct: 149 VSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVSV 208
Query: 1833 Q 1833
Sbjct: 209 F 209
Score = 133 bits (337), Expect = 2e-35
Identities = 33/199 (16%), Positives = 61/199 (30%), Gaps = 35/199 (17%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
+LK+ W NG + R+++ + L IN +D Y + +
Sbjct: 27 TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQ 86
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
T L + +A + L++ K+ V + V +E
Sbjct: 87 KTVDLSGQ---------AYDEAYAEFQRLKQAAIAEKNRA------RVLGGLPDVVTIQE 131
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF-G 181
+ ++ C V DP +V W N K + + + +
Sbjct: 132 GKALNLTCNV-------------------WGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172
Query: 182 FVVMDIAYVQSHDSGEYVC 200
I V + DSG+Y
Sbjct: 173 TAYFTINGVSTADSGKYGL 191
Score = 131 bits (330), Expect = 2e-34
Identities = 36/214 (16%), Positives = 63/214 (29%), Gaps = 29/214 (13%)
Query: 592 AKVICKVL----TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
++ V + V W +NG + + R +T + L I + G Y
Sbjct: 20 IQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELF 79
Query: 648 NKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAP 707
+ L + E Q + + A E +A
Sbjct: 80 DGKTGHQKTVDLSGQAYDEAYAEFQRLK---------------------QAAIAEKNRAR 118
Query: 708 VFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDFGFVI 766
V + ++EG+ + + DP +V W N K + F
Sbjct: 119 VLGGLPDVV-TIQEGKALNLTCNVWG--DPPPEVSWLKNEKALAQTDHCNLKFEAGRTAY 175
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
I+ V D G+Y N YG + ++ V
Sbjct: 176 FTINGVSTADSGKYGLVVKNKYGSETSDFTVSVF 209
Score = 127 bits (321), Expect = 3e-33
Identities = 34/189 (17%), Positives = 63/189 (33%), Gaps = 21/189 (11%)
Query: 317 LSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIE 376
L S E S + + + V + +NG I S R++T + L+I
Sbjct: 11 LKIQSTAEGIQLY-SFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPN 69
Query: 377 DTGVYTCRATNKWGQAEISVNL----------------ECVDKSKGQPPKFTSHIKSLEG 420
D G Y + + +V+L + K + +
Sbjct: 70 DKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVT- 128
Query: 421 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF-GFVVMDIAYVQSHDS 479
+++G + + C + DP +V W N K + + + + I V + DS
Sbjct: 129 IQEGKALNLTCNVW--GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADS 186
Query: 480 GEYVCRAWN 488
G+Y N
Sbjct: 187 GKYGLVVKN 195
Score = 121 bits (305), Expect = 4e-31
Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 30/202 (14%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
+ +T +LKV W HNG I + +RVK + + I +D G+YV
Sbjct: 17 AEGIQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYV 75
Query: 484 CRAWN---------------------NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKV 522
++ F + I ++ R+ D + + E +
Sbjct: 76 MELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKAL 135
Query: 523 HFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF-GFISLDMDYVYARDSGEYICRA 581
+ C + DP + W N + A ++ ++ V DSG+Y
Sbjct: 136 NLTCNV--WGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVV 193
Query: 582 TNKWGTAMTKAKVICKVLTVIV 603
NK+G+ + ++V +
Sbjct: 194 KNKYGSETSDFT-----VSVFI 210
Score = 120 bits (302), Expect = 1e-30
Identities = 33/187 (17%), Positives = 53/187 (28%), Gaps = 41/187 (21%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
+I+ P D G+Y ++ + + Q E Q
Sbjct: 62 QINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQ----------------- 104
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
+ + +A P +T+ E + C +
Sbjct: 105 ---------------------RLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVW- 142
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDF-GFVILEINDVYLRDSGLYTCKATNKHGEAT 1001
DP V W N KAL+ + IN V DSG Y NK+G T
Sbjct: 143 -GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 201
Query: 1002 TSCKLTV 1008
+ ++V
Sbjct: 202 SDFTVSV 208
Score = 115 bits (289), Expect = 6e-29
Identities = 29/177 (16%), Positives = 50/177 (28%), Gaps = 16/177 (9%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL- 295
W N + + KT + L I D G Y ++ + K + L
Sbjct: 33 LKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLS 92
Query: 296 ------------KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVE 343
+ + N + + EG+ + ++ GD V
Sbjct: 93 GQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNV--WGDPPPEVS 150
Query: 344 FLYNGKPIEASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+L N K + + A I G D+G Y NK+G +
Sbjct: 151 WLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 207
Score = 114 bits (286), Expect = 2e-28
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 3/132 (2%)
Query: 1755 NVGQLARFDAKISATKP-LDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAY 1813
+ + + + ++ L V W NG I R KT L I E D G Y
Sbjct: 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKY 74
Query: 1814 ECVAMNNAGEARCEAELVVQSKKAPGK--QAPAPGAAVAQDEAPTVAEPLKDQNVKEGSA 1871
+ + +L Q+ Q A ++ A + ++EG A
Sbjct: 75 VMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKA 134
Query: 1872 VTLKCRITGKPR 1883
+ L C + G P
Sbjct: 135 LNLTCNVWGDPP 146
Score = 109 bits (273), Expect = 9e-27
Identities = 31/165 (18%), Positives = 49/165 (29%), Gaps = 22/165 (13%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
+ + + ++KV W NG + + +R + + P D G+Y+
Sbjct: 18 EGIQLYSFV-TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVM 76
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
+ + L E Q K EK R
Sbjct: 77 ELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNR-------------------- 116
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
A V P+ +QEG+ V G P P V WL N +
Sbjct: 117 -ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQ 160
Score = 101 bits (253), Expect = 4e-24
Identities = 28/206 (13%), Positives = 51/206 (24%), Gaps = 39/206 (18%)
Query: 1566 VSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT------- 1617
+S + + E + +V W NG I K T
Sbjct: 6 LSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINE 65
Query: 1618 -EMEHKGK-----------------------------IQERVVDASEKPAKPPVFTKKIQ 1647
KGK Q A + + V
Sbjct: 66 PTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPD 125
Query: 1648 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK-SILIMRQVFMED 1706
E GDP P + W + + + + + + + + + V D
Sbjct: 126 VVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTAD 185
Query: 1707 SGVFAVIAENRGGKAKCSANLVVEEK 1732
SG + ++ +N+ G + V
Sbjct: 186 SGKYGLVVKNKYGSETSDFTVSVFIP 211
Score = 100 bits (251), Expect = 7e-24
Identities = 34/185 (18%), Positives = 57/185 (30%), Gaps = 31/185 (16%)
Query: 1333 IFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKT 1392
+ L I+ P D+G+YV ++ +S + + Q K
Sbjct: 53 GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 112
Query: 1393 EALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPV 1452
E K R + + + E ++ C +
Sbjct: 113 E----------------------------KNRARVLGGLPDVVTIQEGKALNLTCNV--W 142
Query: 1453 GDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVA-MNFGWVYPEDSGEYLCRATNLYGMDET 1511
GDP +V W N K L + N ++ G A V DSG+Y N YG + +
Sbjct: 143 GDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETS 202
Query: 1512 RAILK 1516
+
Sbjct: 203 DFTVS 207
Score = 96.1 bits (239), Expect = 2e-22
Identities = 40/215 (18%), Positives = 59/215 (27%), Gaps = 44/215 (20%)
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
++ E G L + +LKV W HNG I + +RVK
Sbjct: 2 SSIALSATDLKIQSTAE---------GIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKT 52
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVC-----------------------QWFVNNKPLPAGA 213
+ + I +D G+YV A A
Sbjct: 53 GVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIA 112
Query: 214 KFKTTHDFGYVALDIELMLKTLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGY 262
+ G + + + + T W N K L + G
Sbjct: 113 EKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGR 172
Query: 263 VA-LDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
A I G DSG Y + N GS T+ T+
Sbjct: 173 TAYFTINGVSTADSGKYGLVVKNKYGSETSDFTVS 207
Score = 80.7 bits (199), Expect = 6e-17
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 1/97 (1%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
E + +T LKV W NG ++ R +T + L+I+ P D G+Y
Sbjct: 16 TAEGIQLYSFVT-YYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKY 74
Query: 781 SCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEV 817
++ + + Q E Q K +
Sbjct: 75 VMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAI 111
Score = 73.4 bits (180), Expect = 2e-14
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDF-GLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
DP ++ W KN L+ F+ +IN + DS Y N G S
Sbjct: 144 DPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSD 203
Query: 65 CTLKIE 70
T+ +
Sbjct: 204 FTVSVF 209
Score = 72.2 bits (177), Expect = 5e-14
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Query: 1072 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 1131
+ + ++++W NG RVKT I L ++ D G+Y+
Sbjct: 20 IQLYSFV-TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMEL 78
Query: 1132 TNKWGTAMTKAKVICKAKHDIVTESQLPDSMS 1163
+ + +A + E Q +
Sbjct: 79 FDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAA 110
Score = 71.8 bits (176), Expect = 7e-14
Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 3/126 (2%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 581
+ + ++++W NG RVKT I L ++ D G+Y+
Sbjct: 20 IQLYSFV-TYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMEL 78
Query: 582 TNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641
+ + + F K+ + R + D++ E +
Sbjct: 79 FDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRA--RVLGGLPDVVTIQEGKALN 136
Query: 642 YECRAT 647
C
Sbjct: 137 LTCNVW 142
Score = 54.5 bits (131), Expect = 5e-08
Identities = 17/147 (11%), Positives = 31/147 (21%), Gaps = 48/147 (32%)
Query: 1241 EKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV---- 1292
+ E + + + VT+QE + + V P V
Sbjct: 94 QAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLK 153
Query: 1293 -------DPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDY 1345
++ I+
Sbjct: 154 NEKALAQTDHCNLKFEAG---------------------------------RTAYFTING 180
Query: 1346 VYPEDQGEYVCRAYNDHGEAFTKATIS 1372
V D G+Y N +G + T+S
Sbjct: 181 VSTADSGKYGLVVKNKYGSETSDFTVS 207
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Length = 305
Score = 156 bits (395), Expect = 6e-42
Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 9/208 (4%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPIT-SSPDFQIHTF-STK 1694
A P F ++++ Q A + G P P +KW+R+ I ++I F
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVI 1754
LI+ V +D+ V+ V A N+GG +A+L VE + + P L + +
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAK-----IHLPKTLEGMGAVHA 116
Query: 1755 NVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVV-EDSGAY 1813
G++ S + W K I + Y+ + + +L+ V +D+G Y
Sbjct: 117 LRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY 176
Query: 1814 ECVAMNNAGEARCEAELVVQSK-KAPGK 1840
A N G + EL V P
Sbjct: 177 VVCAKNRFGIDQKTVELDVADVPDPPRG 204
Score = 125 bits (315), Expect = 3e-31
Identities = 41/235 (17%), Positives = 70/235 (29%), Gaps = 45/235 (19%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI--NDF 971
AP F +L + + A C+ T P V+W+ GK + A I
Sbjct: 2 AMAPHFKEELRNLNVRYQSNATLVCK--VTGHPKPIVKWYRQGKEIIADGLKYRIQEFKG 59
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNI 1031
G+ L I V D+ +Y +ATN+ G + + L V+
Sbjct: 60 GYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVE---------------------- 97
Query: 1032 QKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
K + P + + V P I W
Sbjct: 98 ---------------VPAKIHLPKTLEGMG-AVHALRGEVVSIKIPF--SGKPDPVITWQ 139
Query: 1092 FNGRPFATGSRVKTVYDFGFIS-LDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ + F S + + V +D+G Y+ A N++G ++
Sbjct: 140 KGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELD 194
Score = 112 bits (283), Expect = 3e-27
Identities = 40/196 (20%), Positives = 72/196 (36%), Gaps = 24/196 (12%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVR-KITATET--- 1616
AP F + V+ A +VTG+P+P V W G I+ + ++ +I +
Sbjct: 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYH 62
Query: 1617 ------TEMEHKGKIQ---ERVVDASEKPAK----------PPVFTKKIQPCRAFEQDQA 1657
+ Q + A P + + A +
Sbjct: 63 QLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVV 122
Query: 1658 RFEVEFDGDPLPTIKWFREDFPITSSPDFQIH-TFSTKSILIMRQVFMEDSGVFAVIAEN 1716
++ F G P P I W + I ++ +Q+ T S S++ V +D+G + V A+N
Sbjct: 123 SIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKN 182
Query: 1717 RGGKAKCSANLVVEEK 1732
R G + + L V +
Sbjct: 183 RFGIDQKTVELDVADV 198
Score = 109 bits (274), Expect = 5e-26
Identities = 40/186 (21%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF--GM 365
P F + ++L+ + A G V++ GK I A + F G
Sbjct: 5 PHFKEELRNLN-VRYQSNATLVCK--VTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGY 61
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L I +D VY RATN+ G + +LE +K PK + ++ G+
Sbjct: 62 HQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVH-ALRGE 120
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF-VVMDIAYVQSHDSGEYVC 484
+ + P+ + W I + +++ F ++ V+ D+G YV
Sbjct: 121 VVSIKIPFS--GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVV 178
Query: 485 RAWNNF 490
A N F
Sbjct: 179 CAKNRF 184
Score = 103 bits (259), Expect = 5e-24
Identities = 38/205 (18%), Positives = 66/205 (32%), Gaps = 27/205 (13%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS--D 463
P F +++L + +A C +T P V+W+ GK I +
Sbjct: 2 AMAPHFKEELRNLNV-RYQSNATLVCKVTGHPKPI--VKWYRQGKEIIADGLKYRIQEFK 58
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQD- 512
G+ + IA V D+ Y RA N + +P +I LP +
Sbjct: 59 GGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPA-------KIHLPKTLEGM 111
Query: 513 -NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS-LDMDYVY 570
+ V P I W + + F S + + V
Sbjct: 112 GAVHALRGEVVSIKIPF--SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVE 169
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI 595
+D+G Y+ A N++G ++
Sbjct: 170 RKDAGFYVVCAKNRFGIDQKTVELD 194
Score = 102 bits (257), Expect = 1e-23
Identities = 33/147 (22%), Positives = 55/147 (37%), Gaps = 16/147 (10%)
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD-IRYKTLEEDN- 1796
G + P F + + + A K++ V W + GK+II D ++Y+ E
Sbjct: 1 GAMAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
L+I +D+ Y+ A N G A L V+ A+ P
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVP--------------AKIHLPK 106
Query: 1857 VAEPLKDQNVKEGSAVTLKCRITGKPR 1883
E + + G V++K +GKP
Sbjct: 107 TLEGMGAVHALRGEVVSIKIPFSGKPD 133
Score = 101 bits (253), Expect = 4e-23
Identities = 41/217 (18%), Positives = 71/217 (32%), Gaps = 46/217 (21%)
Query: 592 AKVICKVL---TVIVEWFYNGKKL-PHGHRYR-TFHDFGIVILDILYCYEENSGVYECRA 646
A ++CKV IV+W+ GK++ G +YR G L I ++++ VY+ RA
Sbjct: 22 ATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRA 81
Query: 647 TNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQA 706
TN+ GS ASL +E A +
Sbjct: 82 TNQGGSVSGTASL--------------------------EVEVPAKIH-----------L 104
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDFGFV 765
P + + GE + + P + W + ++
Sbjct: 105 PKTLEGMGAVH-ALRGEVVSIKIPFS--GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTS 161
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
++ + V +D G Y A N +G + + V
Sbjct: 162 LVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADV 198
Score = 99.1 bits (247), Expect = 2e-22
Identities = 34/202 (16%), Positives = 60/202 (29%), Gaps = 53/202 (26%)
Query: 2 EPRADPNLKIEWFKNGVPLSL-GSRIR-STFDFGLVTLSINSLRADDSAIYTCKATNLLG 59
+ P ++W++ G + G + R F G L I S+ DD+ +Y +ATN G
Sbjct: 27 KVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGG 86
Query: 60 EAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVE 119
T +L++E K P + + V
Sbjct: 87 SVSGTASLEVEVP---------------------AK----------IHLPKTLEGMGAVH 115
Query: 120 CKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 179
E V P+ + W I + +++
Sbjct: 116 ALRGEVVSIKIPF-------------------SGKPDPVITWQKGQDLIDNNGHYQVIVT 156
Query: 180 FGF-VVMDIAYVQSHDSGEYVC 200
F ++ V+ D+G YV
Sbjct: 157 RSFTSLVFPNGVERKDAGFYVV 178
Score = 94.4 bits (235), Expect = 7e-21
Identities = 31/205 (15%), Positives = 53/205 (25%), Gaps = 57/205 (27%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
I+ V +D Y RA N G + A LE
Sbjct: 65 IIASVTDDDATVYQVRATNQGGSVSGT----------------------------ASLE- 95
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
E +I P+ L + + + +
Sbjct: 96 ----VEVPA----------------KIH-----LPKTLEGMGAVHALRGEVVSIKIPFS- 129
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGF-VILEINDVYLRDSGLYTCKATNKHGEAT 1001
P + W + + I F ++ N V +D+G Y A N+ G
Sbjct: 130 -GKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQ 188
Query: 1002 TSCKLTVKGRQGIDVEPQVSAIFAN 1026
+ +L V +VS + +
Sbjct: 189 KTVELDVADVPDPPRGVKVSDVSRD 213
Score = 93.7 bits (233), Expect = 1e-20
Identities = 45/198 (22%), Positives = 67/198 (33%), Gaps = 49/198 (24%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKT-GSRFR-TFCDFG 763
AP F L N++ +R NA + T PK V+W+ GK + G ++R G
Sbjct: 4 APHFKEELRNLN-VRYQSNATLVCK--VTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQL--------PKGM 815
+ L I+ V +D Y RA N G +AS++V+ I L L +G
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGE 120
Query: 816 EVFI------------------------------------SFHEISPVYPEDCGQYSCRA 839
V I S + V +D G Y A
Sbjct: 121 VVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCA 180
Query: 840 YNDYGEAVTSASMKVQGK 857
N +G + + V
Sbjct: 181 KNRFGIDQKTVELDVADV 198
Score = 91.0 bits (226), Expect = 9e-20
Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 8/166 (4%)
Query: 241 WFVNNKPL-PAGAKFKTTH-DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
W+ K + G K++ GY L I +D+ +Y V+ATN GS + + +L+
Sbjct: 38 WYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVE 97
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
++ P + GE+ + G + + I+ + +
Sbjct: 98 VPAKIH--LPKTLEGMGAVH-ALRGEVVSIKIPF--SGKPDPVITWQKGQDLIDNNGHYQ 152
Query: 359 TVHAFGM-VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
+ ++ G + +D G Y A N++G + +V L+ D
Sbjct: 153 VIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADV 198
Score = 86.7 bits (215), Expect = 3e-18
Identities = 34/195 (17%), Positives = 55/195 (28%), Gaps = 44/195 (22%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPL-PHKNRFNP-IYDF 1480
P F ++ ++ V + C+ G P V+W+ GK + ++ +
Sbjct: 4 APHFKEEL--RNLNVRYQSNATLVCK--VTGHPKPIVKWYRQGKEIIADGLKYRIQEFKG 59
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
GY + V +D+ Y RATN G A L+ I
Sbjct: 60 GYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI----------------- 102
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLING 1600
P + A GE +G P P + W
Sbjct: 103 --------------------HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQ 142
Query: 1601 HTIVNEIVRKITATE 1615
I N ++ T
Sbjct: 143 DLIDNNGHYQVIVTR 157
Score = 84.8 bits (210), Expect = 1e-17
Identities = 38/277 (13%), Positives = 72/277 (25%), Gaps = 96/277 (34%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVE----PRV------------DPRLRVECSLSTAF 1306
P F E+ ++ V+ +V P V + R++
Sbjct: 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQ------- 55
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
F G+ L I V +D Y RA N G
Sbjct: 56 --------------------------EFKGGYHQLIIASVTDDDATVYQVRATNQGGSVS 89
Query: 1367 TKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPR 1426
A++ ++ P K P+
Sbjct: 90 GTASL-------------------------------------------EVEVPAKIHLPK 106
Query: 1427 FVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMN 1486
+ + + + + G P+ + W + + + I + ++
Sbjct: 107 TLEGMGAVH-ALRGEVVSIKIPF--SGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLV 163
Query: 1487 F-GWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
F V +D+G Y+ A N +G+D+ L P
Sbjct: 164 FPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVPD 200
Score = 83.3 bits (206), Expect = 4e-17
Identities = 31/184 (16%), Positives = 57/184 (30%), Gaps = 38/184 (20%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVK-TVYDFGFISLDMDYVY 570
NL+V C + P + W+ G+ A G + + + G+ L + V
Sbjct: 13 NLNVRYQSNATLVC--KVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVT 70
Query: 571 ARDSGEYICRATNKWGTAMTKAKVICKVLTVI---------------------------- 602
D+ Y RATN+ G+ A + +V I
Sbjct: 71 DDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSG 130
Query: 603 -----VEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
+ W + + Y+ ++ +++G Y A N++G D
Sbjct: 131 KPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190
Query: 657 ASLK 660
L
Sbjct: 191 VELD 194
Score = 77.5 bits (191), Expect = 4e-15
Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 40/213 (18%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F L ++ + N C+V P+ V+W+ GK I
Sbjct: 5 PHFKEELRNLNVRYQSNATLVCKVT-------------------GHPKPIVKWYRQGKEI 45
Query: 169 FHKNRVKMVS--DFGFVVMDIAYVQSHDSGEYVCQ-------------WFVNNKPLPAGA 213
+ G+ + IA V D+ Y + V
Sbjct: 46 IADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLP 105
Query: 214 KFKTTHDFGYVALDIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTHDFGYVA-LDI 267
K + + +K P W + ++ + + +
Sbjct: 106 KTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFP 165
Query: 268 VGAYAEDSGIYTVKATNSKGSATTSGTLKCLER 300
G +D+G Y V A N G + L +
Sbjct: 166 NGVERKDAGFYVVCAKNRFGIDQKTVELDVADV 198
Score = 66.3 bits (162), Expect = 2e-11
Identities = 13/68 (19%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P+ I W K + + + N + D+ Y A N G T
Sbjct: 131 KPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKT 190
Query: 65 CTLKIEDR 72
L + D
Sbjct: 191 VELDVADV 198
Score = 62.5 bits (152), Expect = 3e-10
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVK-TVYDFG 1110
P F +L++ L+V C + P + W+ G+ A G + + + G
Sbjct: 4 APHFKEELRN-LNVRYQSNATLVC--KVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGG 60
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDI 1152
+ L + V D+ Y RATN+ G+ A + + I
Sbjct: 61 YHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKI 102
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor
tyrosine kinase, growth factor cytoki dimerization,
transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Length = 524
Score = 158 bits (400), Expect = 1e-40
Identities = 71/537 (13%), Positives = 137/537 (25%), Gaps = 107/537 (19%)
Query: 194 DSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV-----PFT--------- 239
+ +++C + + G+ + I L+
Sbjct: 6 GAWDFLCV-LLLLLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPGFV 64
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
+W K A A ++G YT + ++
Sbjct: 65 KWTFEILDETNENKQNE--------WITEKAEATNTGKYTCTNKHGLSNSIY-------- 108
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY--NGKPIEASHRI 357
+FV + L + L E P+ D +T L GKP+ R
Sbjct: 109 -VFV-RDPAKLFLVDRSLY-GKEDNDTLVR---CPLTDPEVTNYSLKGCQGKPLPKDLRF 162
Query: 358 RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC-VDKSKGQPPKFTSHIK 416
G+++ + + C + G++ +S V + P +
Sbjct: 163 IPDPKAGIMIKSV--KRAYHRLCLHCSVDQE-GKSVLSEKFILKVRPAFKAVPVVSVSKA 219
Query: 417 SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-----I 471
S L++G+ CT+ V+ + W + + F I
Sbjct: 220 SYL-LREGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTI 277
Query: 472 AYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGK 521
+ + +DSG ++C A N F + F I + + V +
Sbjct: 278 SSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGF-------INIFPMINTTVFVNDGEN 330
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI-----SLDMDYVYARDSGE 576
V E P W + R F + L + + + G
Sbjct: 331 VDLIVEYEAFPKPEH-QQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGT 389
Query: 577 YICRATNKWGTAMTKAKVI-------------------CKVL---TVIVEWFYNGKKLP- 613
Y +N A V C ++W++
Sbjct: 390 YTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWYFCPGTEQR 449
Query: 614 -----------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ +V I +++G EC+A N G +
Sbjct: 450 CSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNF 506
Score = 156 bits (395), Expect = 5e-40
Identities = 69/608 (11%), Positives = 140/608 (23%), Gaps = 161/608 (26%)
Query: 272 AEDSGIYT----VKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAH 327
A + + + GS+ S + P L + G+
Sbjct: 4 ARGAWDFLCVLLLLLRVQTGSSQPSVSPGEPSP-------PSIHPGKSDLI-VRVGDEIR 55
Query: 328 F--EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 385
V++ + ++ + +TG YTC
Sbjct: 56 LLCTDP--------GFVKWTFEILDETNENKQNE--------WITEKAEATNTGKYTCTN 99
Query: 386 TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEW 445
+ I V + P K +SL K+ + C P+ DPE+
Sbjct: 100 KHGLS-NSIYVFVR-------DPAKLFLVDRSLY-GKEDNDTLVRC---PLTDPEVTNYS 147
Query: 446 FH--NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQ 503
GKP+ R G ++ + +++ C + + +
Sbjct: 148 LKGCQGKPLPKDLRFIPDPKAGIMIKSVK--RAYHRLCLHCSVDQEGKSVLSEKFILKVR 205
Query: 504 IRLPSP-----SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 558
+ S+ + + E + C ++ ++ W + + +
Sbjct: 206 PAFKAVPVVSVSKASYLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKYNSWHH 264
Query: 559 FGFI-----SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI------------------ 595
F +L + DSG ++C A N +G+A +
Sbjct: 265 GDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVF 324
Query: 596 ----------CKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVI-----LDILYCYE 636
+ +W Y + + I L +
Sbjct: 325 VNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKG 384
Query: 637 ENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRT 696
G Y +N +
Sbjct: 385 TEGGTYTFLVSNSDVNA------------------------------------------A 402
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHF--EARLTPTDDPKLKVEWFWNGKPMKTGS 754
++ P N A P+ ++W++ + S
Sbjct: 403 IAFNVYVNTKPEILT-------YDRLVNGMLQCVA----AGFPEPTIDWYFCPGTEQRCS 451
Query: 755 RFRTFCDFGF------------VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
D V I + G C+AYND G+ + +G
Sbjct: 452 ASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGN 511
Query: 803 RSIILESQ 810
+
Sbjct: 512 NKEQIHPH 519
Score = 152 bits (385), Expect = 9e-39
Identities = 79/630 (12%), Positives = 152/630 (24%), Gaps = 163/630 (25%)
Query: 43 RADDSAIYTCK----ATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVR 98
A + + C G + + +
Sbjct: 3 GARGAWDFLCVLLLLLRVQTGSSQPSVSPG------------------------------ 32
Query: 99 KDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELK 158
P +D+ + + + C
Sbjct: 33 ------EPSPPSIHPGKSDLIVRVGDEIRLLCTDPGF----------------------- 63
Query: 159 VEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQW----------FVNNKP 208
V+W ++N+ ++ ++G+Y C FV +
Sbjct: 64 VKWTFEILDETNENKQNEWI--------TEKAEATNTGKYTCTNKHGLSNSIYVFVRDPA 115
Query: 209 LPAGAKFKTTHDFGYVALDIELMLKTLVP------FTEWFVNNKPLPAGAKFKTTHDFGY 262
F Y D + +++ + ++ KPLP +F G
Sbjct: 116 KL----FLVDRSL-YGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGI 170
Query: 263 VALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSE 322
+ + AY +G + S L+ P+ S+ L E
Sbjct: 171 MIKSVKRAY--HRLCLHCSVDQ-EGKSVLSEKFI-LKVRPAFKAVPVVSVSKASYL-LRE 225
Query: 323 GEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIR-----TVHAFGMVVLEILGTKI 375
GE + + + + + + L I ++
Sbjct: 226 GEEFTVTCTIKDVSSS---VYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARV 282
Query: 376 EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTP 435
D+GV+ C A N +G A ++ LE V KG F ++ + DG++
Sbjct: 283 NDSGVFMCYANNTFGSANVTTTLE-V-VDKGFINIFPMINTTVF-VNDGENVDLIVEYE- 338
Query: 436 VNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCRAWNNF 490
+W + + K S+ + + ++ + G Y N+
Sbjct: 339 AFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSD 398
Query: 491 ----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 540
+ P +I L C P IDW
Sbjct: 399 VNAAIAFNVYVNTKP-------EI---------LTYDRLVNGMLQCVAA--GFPEPTIDW 440
Query: 541 FFNGRPFATGSRVKTVYDFGF------------ISLDMDYVYARDSGEYICRATNKWGTA 588
+F S D + +D + +G C+A N G
Sbjct: 441 YFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKT 500
Query: 589 MTKAKVICKVLTVIVEWFYNGKKLPHGHRY 618
K + PH H +
Sbjct: 501 SAYFNFAFKGNNKE-------QIHPHHHHH 523
Score = 148 bits (375), Expect = 2e-37
Identities = 74/593 (12%), Positives = 140/593 (23%), Gaps = 181/593 (30%)
Query: 376 EDTGVYTC----RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
+ C + G ++ SV+ + PP L ++ GD C
Sbjct: 5 RGAWDFLCVLLLLLRVQTGSSQPSVSPG-----EPSPPSIHPGKSDLI-VRVGDEIRLLC 58
Query: 432 TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN-- 489
T V+W ++N+ ++ ++G+Y C +
Sbjct: 59 TDPGF------VKWTFEILDETNENKQNEWI--------TEKAEATNTGKYTCTNKHGLS 104
Query: 490 ---FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF--FNG 544
++F+ +L E C L +DP + G
Sbjct: 105 NSIYVFVRDPAKLFLVD--------RSLYGKEDNDTLVRCPL---TDPEVTNYSLKGCQG 153
Query: 545 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI-- 602
+P R G + A C + G ++ K I KV
Sbjct: 154 KPLPKDLRFIPDPKAGIMIKS--VKRAYHRLCLHCSVDQE-GKSVLSEKFILKVRPAFKA 210
Query: 603 ---------------------------------VEWFYNGKKLPHGHRYR-----TFHDF 624
W + +Y F+
Sbjct: 211 VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE 270
Query: 625 GIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKI 684
L I +SGV+ C A N +GS +L+ V K + + + +
Sbjct: 271 RQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVF------ 324
Query: 685 QTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWF 744
+ +GEN P+ +W
Sbjct: 325 ----------------------------------VNDGENVDLIVEYEAFPKPEH-QQWI 349
Query: 745 WNGKPMKTGSRFRTFCDFGFVI-----LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
+ + + I L ++ + + G Y+ N A + ++ V
Sbjct: 350 YMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYV 409
Query: 800 QGKRSIILESQLPKGMEV------------------------------------------ 817
K I+ + +
Sbjct: 410 NTKPEILTY---DRLVNGMLQCVAAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSG 466
Query: 818 -----FISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 865
+ I + G C+AYND G+ + +G +
Sbjct: 467 PPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNKEQIHPH 519
Score = 145 bits (367), Expect = 2e-36
Identities = 64/619 (10%), Positives = 118/619 (19%), Gaps = 188/619 (30%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNF 1322
PP + V+ + +R V +
Sbjct: 35 SPPSIHPGKSDLIVRVGDEIRLLCTDPGFVKWTFEI------------------------ 70
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
+ + + G+Y C +
Sbjct: 71 -------LDETNENKQNEWITEKAEATNTGKYTCTNKHGLS------------------- 104
Query: 1383 NQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQS 1442
+ IY+ D P + ++ E
Sbjct: 105 ------------------------NSIYVFVRD--------PAKLFLVDRSLY-GKEDND 131
Query: 1443 TKFECQLAPVGDPNMKVEWF--LNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
T C P+ DP + GKPLP RF P G + + C
Sbjct: 132 TLVRC---PLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSV--KRAYHRLCLHC 186
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
+ L K
Sbjct: 187 SVDQEGKSVLSEKF-------------------------------------ILKVRPAFK 209
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATETTE 1618
PV + ++EGE CT + W +
Sbjct: 210 AVPVVSVSKASYLLREGEEFTVTCT-IKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFN 268
Query: 1619 MEHKGKIQERVVDAS------------------------EKPAKPPVFTKKIQPCRAFEQ 1654
E + + + +F +
Sbjct: 269 YERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDG 328
Query: 1655 DQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQI-----HTFSTKSILIMRQVFMEDSG 1708
+ VE++ P P +W + T + S L + ++ + G
Sbjct: 329 ENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGG 388
Query: 1709 VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA 1768
+ + N A + N+ V P LT + +
Sbjct: 389 TYTFLVSNSDVNAAIAFNVYVN----------TKPEILTY------DRLVNGMLQCVAAG 432
Query: 1769 TKPLDVYWLKNGKKIIPD------------IRYKTLEEDNLFTLLIIEAVVEDSGAYECV 1816
+ W + I + + +G EC
Sbjct: 433 FPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECK 492
Query: 1817 AMNNAGEARCEAELVVQSK 1835
A N+ G+ +
Sbjct: 493 AYNDVGKTSAYFNFAFKGN 511
Score = 143 bits (362), Expect = 9e-36
Identities = 67/525 (12%), Positives = 139/525 (26%), Gaps = 136/525 (25%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIE 70
++W + + ++ A ++ YTC + L ++
Sbjct: 64 VKWTFEILDETNENKQN--------EWITEKAEATNTGKYTCTNKHGLSNSIYV------ 109
Query: 71 DRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDC 130
V D + KE+ + C
Sbjct: 110 ---------------------------------FVRDPAKLFLVDRSLYGKEDNDTLVRC 136
Query: 131 RVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH--NGKPIFHKNRVKMVSDFGFVVMDIA 188
+ DPE+ GKP+ R G ++ +
Sbjct: 137 PLT--------------------DPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVK 176
Query: 189 YVQSHDSGEYVCQ------------WFVNNKPLPAGAKFKTTHDFGYVAL---DIELMLK 233
+++ C + + +P + Y+ + +
Sbjct: 177 --RAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCT 234
Query: 234 TL---VPFT-EWFVNNKPLPAGAKFKTTHDFGYVA-----LDIVGAYAEDSGIYTVKATN 284
W N K+ + H + L I A DSG++ A N
Sbjct: 235 IKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANN 294
Query: 285 SKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTV 342
+ GSA + TL+ +++ F+N +++GE E P +
Sbjct: 295 TFGSANVTTTLEVVDKGFIN-----IFPMINTTVFVNDGENVDLIVEYEAFP---KPEHQ 346
Query: 343 EFLYNGKPIEASHR-----IRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+++Y + + + L + K + G YT +N A I+ N
Sbjct: 347 QWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFN 406
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNR 457
+ V+ P+ + + +C PE ++W+ +
Sbjct: 407 VY-VN----TKPEILT-------YDRLVNGMLQCVAA--GFPEPTIDWYFCPGTEQRCSA 452
Query: 458 VKMVSDFGFVVMD------------IAYVQSHDSGEYVCRAWNNF 490
+ D + I +G C+A+N+
Sbjct: 453 SVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDV 497
Score = 141 bits (356), Expect = 5e-35
Identities = 59/500 (11%), Positives = 110/500 (22%), Gaps = 130/500 (26%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN- 1475
P + PP D +V + + C V+W ++N+ N
Sbjct: 30 SPGEPSPPSIH--PGKSDLIVRVGDEIRLLCT----DPGF--VKWTFEILDETNENKQNE 81
Query: 1476 -PIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMK 1534
++G+Y C + ++
Sbjct: 82 WITEK----------AEATNTGKYTCTNKH------------GLSNSIYVF--------- 110
Query: 1535 SIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRV 1594
V D + +E +T
Sbjct: 111 -------------------VRD-----PAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNY 146
Query: 1595 MW-------LINGHTIVNEIVRKITATETTEMEHKGKIQ-------------ERVVDASE 1634
L + + I H+ + + ++
Sbjct: 147 SLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRP 206
Query: 1635 KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFST 1693
PV + E ++ W RE+ +
Sbjct: 207 AFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGD 266
Query: 1694 -----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTT 1748
++ L + + DSGVF A N G A + L V +K F
Sbjct: 267 FNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGF-------INIFPMI 319
Query: 1749 ISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLF-----TLLI 1802
++ +N G+ + A KP W+ + E+ L +
Sbjct: 320 NTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHL 379
Query: 1803 IEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLK 1862
+ G Y + N+ A + V +K P +
Sbjct: 380 TRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTK-------------------PEILT--- 417
Query: 1863 DQNVKEGSAVTLKCRITGKP 1882
L+C G P
Sbjct: 418 ---YDRLVNGMLQCVAAGFP 434
Score = 129 bits (324), Expect = 6e-31
Identities = 79/627 (12%), Positives = 149/627 (23%), Gaps = 198/627 (31%)
Query: 478 DSGEYVCRAWNNFIFIPPF--PIFIFHQIRLPS--PSQDNLDVPEAGKVHFDCRLEPKSD 533
+ +++C P + PS P + +L V ++ C
Sbjct: 6 GAWDFLCVLLLLLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPG--- 62
Query: 534 PTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT--- 590
+ W F ++ + A ++G+Y C + ++
Sbjct: 63 ---FVKWTFEILDETNENKQNE--------WITEKAEATNTGKYTCTNKHGLSNSIYVFV 111
Query: 591 -------------------KAKVICKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIV 627
V C + +T GK LP R+ GI+
Sbjct: 112 RDPAKLFLVDRSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIM 171
Query: 628 ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTL 687
I + + C + S V IL+ +
Sbjct: 172 IKSVKR--AYHRLCLHCSVDQEGKS---------VLSEKFILKVRPA------------- 207
Query: 688 EDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNG 747
+ PV +V ++ LREGE + + W
Sbjct: 208 ---------------FKAVPVVSVSKASYL-LREGEEFTVTCTIKDVSSS-VYSTWKREN 250
Query: 748 KPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL 807
K ++ ++ G +
Sbjct: 251 SQTKLQEKYNSW---------------------------------------HHGDFNYER 271
Query: 808 ESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLP 867
++ L IS D G + C A N +G A + +++V K I + +
Sbjct: 272 QATL-----------TISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMIN 320
Query: 868 KGMEGTIDKIAEL----EGY----------------GHEREDRTIDKIAELEGYGHERED 907
+ + +L E + + + + +
Sbjct: 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLT 380
Query: 908 RI-EEDLGK----------------------APEFLTTPTDLTLAESTLAHFECRLTPTN 944
R+ + G PE LT + +C
Sbjct: 381 RLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVN------GMLQC--VAAG 432
Query: 945 DPSMTVEWFHNGKALSAGSRIKTINDFGF------------VILEINDVYLRDSGLYTCK 992
P T++W+ S D V I+ + +G CK
Sbjct: 433 FPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECK 492
Query: 993 ATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
A N G+ + KG + P
Sbjct: 493 AYNDVGKTSAYFNFAFKGNNKEQIHPH 519
Score = 123 bits (310), Expect = 3e-29
Identities = 56/343 (16%), Positives = 83/343 (24%), Gaps = 55/343 (16%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM 1619
P V+ G+ R C G+ + W NE + TE E
Sbjct: 35 SPPSIHPGKSDLIVRVGDEIRLLC-TDPGFVK----WTFEILDETNENKQNEWITEKAEA 89
Query: 1620 EHKGK------------IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDP 1667
+ GK I V D P + E + DP
Sbjct: 90 TNTGKYTCTNKHGLSNSIYVFVRD-------PAKLFLVDRSLYGKEDNDTLVRCPL-TDP 141
Query: 1668 LPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG-KAKCSAN 1726
T + D + I+I + G
Sbjct: 142 EVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFI 201
Query: 1727 LVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIP 1785
L V + P + +S ++ G+ I + W + +
Sbjct: 202 LKVRPAFKA------VPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKL 255
Query: 1786 DIRYKTLEEDNLF-----TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGK 1840
+Y + + TL I A V DSG + C A N G A L V G
Sbjct: 256 QEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVV---DKGF 312
Query: 1841 QAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P V +G V L P+
Sbjct: 313 INIFP-------------MINTTVFVNDGENVDLIVEYEAFPK 342
Score = 120 bits (302), Expect = 4e-28
Identities = 57/471 (12%), Positives = 112/471 (23%), Gaps = 103/471 (21%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
P S++ +R G+ V+W + ++
Sbjct: 35 SPPSIHPGKSDLI-VRVGDEIRLLCTDPGF------VKWTFEILDETNENKQNE------ 81
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGMEVFISF 821
+ G+Y+C + S + V+ + L + + + +
Sbjct: 82 --WITEKAEATNTGKYTCTNKHGLS---NSIYVFVRDPAKLFLVDRSLYGKEDNDTLVR- 135
Query: 822 HEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
C +T + + LPK + D A +
Sbjct: 136 ---------------CP--------LTDPEVTNYSLKGCQ-GKPLPKDLRFIPDPKAGIM 171
Query: 882 GYGHEREDRTIDKIAELEGYGHEREDR-----IEEDLGKAPEFLTTPTDLTLAESTLAHF 936
+R + ++ G + P + L E
Sbjct: 172 IKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTV 231
Query: 937 ECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV-----ILEINDVYLRDSGLYTC 991
C + + + W + + + F L I+ + DSG++ C
Sbjct: 232 TCTIKDVSSS-VYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMC 290
Query: 992 KATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKP 1051
A N G A + L V +K
Sbjct: 291 YANNTFGSANVTTTLEVV---------------------------------------DKG 311
Query: 1052 NPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 1111
+F + + V + V E P W + R F +
Sbjct: 312 FINIFP-MINTTVFVNDGENVDLIVEYEAFPKPEH-QQWIYMNRTFTDKWEDYPKSENES 369
Query: 1112 I-----SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQ 1157
L + + + G Y +N A V K +I+T +
Sbjct: 370 NIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDR 420
Score = 110 bits (276), Expect = 6e-25
Identities = 62/456 (13%), Positives = 116/456 (25%), Gaps = 119/456 (26%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P DP + K L +R D + + RA C +
Sbjct: 137 PLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVL 196
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
S ++L A+P++ + + +E
Sbjct: 197 S--------EKFILKVRPAFKAVPVVSVSKASYLL-----------------------RE 225
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 182
E C ++ + W + + F
Sbjct: 226 GEEFTVTCTIKD------------------VSSSVYSTWKRENSQTKLQEKYNSWHHGDF 267
Query: 183 VVMD-----IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT----HDFGYVAL------D 227
I+ + +DSG ++C NN G+ TT D G++ +
Sbjct: 268 NYERQATLTISSARVNDSGVFMCY--ANN---TFGSANVTTTLEVVDKGFINIFPMINTT 322
Query: 228 IELMLKTLVPFT------------EWFVNNKPLPAGAKFKTTHDFGYVA-----LDIVGA 270
+ + V +W N+ + + L +
Sbjct: 323 VFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRL 382
Query: 271 YAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEA 330
+ G YT +NS +A + + VN P + L G + A
Sbjct: 383 KGTEGGTYTFLVSNSDVNAAIAFNVY------VNT-KP----EILTYDRLVNGML-QCVA 430
Query: 331 SLIPVGDQTMTVEFLYNGK----------PIEASHRIRTVHAFG--MVVLEILGTKIEDT 378
+ G T+++ + P++ + FG +V I + +
Sbjct: 431 A----GFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHN 486
Query: 379 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
G C+A N G+ N K H
Sbjct: 487 GTVECKAYNDVGKTSAYFNFA-FKG----NNKEQIH 517
Score = 103 bits (259), Expect = 7e-23
Identities = 88/604 (14%), Positives = 152/604 (25%), Gaps = 142/604 (23%)
Query: 830 EDCGQYSC----RAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGMEGTIDKIAE--- 879
+ C G + S S SI + G E +
Sbjct: 5 RGAWDFLCVLLLLLRVQTGSSQPSVSPGEPSPPSIHPGKSDLIVRVGDEIRLLCTDPGFV 64
Query: 880 ---LEGYGHEREDR----TIDKI-AELEG-----YGHEREDRIEEDLGKAPEFLTTPTDL 926
E E++ +K A G H + I + + L
Sbjct: 65 KWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKHGLSNSIYVFVRDPAKLFLVDRSL 124
Query: 927 TLAESTLAHFECRLTPTNDPSMTVEWFH--NGKALSAGSRIKTINDFGFVILEINDVYLR 984
E C LT DP +T GK L R G +I +
Sbjct: 125 YGKEDNDTLVRCPLT---DPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMI--KSVKRAY 179
Query: 985 DSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDEL 1044
C G++ S K +K R
Sbjct: 180 HRLCLHCSVDQ-EGKSVLSEKFILKVRPAFKA---------------------------- 210
Query: 1045 IPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK 1104
PV + + + E + C ++ ++ W +
Sbjct: 211 --------VPVVSVSKA-SYLLREGEEFTVTCTIK-DVSSSVYSTWKRENSQTKLQEKYN 260
Query: 1105 TVYDFGFI-----SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLP 1159
+ + F +L + DSG ++C A N +G+A + K I +
Sbjct: 261 SWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMIN 320
Query: 1160 DSMSAEKLKEL------EKNYTPEEI----EEDEIPEEPPRLNQSRYKKQNQSAWYDSEL 1209
++ + + E PE ++ +S + Y SEL
Sbjct: 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDKWEDYPKSE---NESNIRYVSEL 377
Query: 1210 SEYQKERANESTELEKHD------IVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEE 1263
T L+ + +V+ S + +++ + N
Sbjct: 378 H---------LTRLKGTEGGTYTFLVSNSDVNAAIAF----NVYVNT------------- 411
Query: 1264 PPRFITEIESVTVQ-----EAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFL 1318
P +T V P EP + +F P +
Sbjct: 412 KPEILTYDRLVNGMLQCVAAGFP-------EPTI-----------DWYFCPGTEQRCSAS 453
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
+ + + S P F V ID + G C+AYND G+ + K
Sbjct: 454 VLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAFKGNNK 513
Query: 1379 IQLQ 1382
Q+
Sbjct: 514 EQIH 517
Score = 84.7 bits (209), Expect = 1e-16
Identities = 29/261 (11%), Positives = 52/261 (19%), Gaps = 69/261 (26%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G F T + + + P +W + + + ++
Sbjct: 311 GFINIFPMINTTVFVNDGENVDLIVEYEAFPKPE-HQQWIYMNRTFTDKWEDYPKSENES 369
Query: 974 VI-----LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANAT 1028
I L + + + G YT +N A + + V
Sbjct: 370 NIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT------------------ 411
Query: 1029 KNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRI 1088
P + C P I
Sbjct: 412 ------------------------KPEILT-------YDRLVNGMLQCVAA--GFPEPTI 438
Query: 1089 DWFFNGRPFATGSRVKTVYDFGF------------ISLDMDYVYARDSGEYICRATNKWG 1136
DW+F S D + +D + +G C+A N G
Sbjct: 439 DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498
Query: 1137 TAMTKAKVICKAKHDIVTESQ 1157
K +
Sbjct: 499 KTSAYFNFAFKGNNKEQIHPH 519
Score = 83.2 bits (205), Expect = 3e-16
Identities = 58/675 (8%), Positives = 132/675 (19%), Gaps = 218/675 (32%)
Query: 984 RDSGLYTCK----ATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALY 1039
R + + C + G + S
Sbjct: 5 RGAWDFLCVLLLLLRVQTGSSQPSVSPGE------------------------------- 33
Query: 1040 RKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT 1099
P+PP D L V ++ C + W F
Sbjct: 34 -----------PSPPSIHPGKSD-LIVRVGDEIRLLCTDPG------FVKWTFEILDETN 75
Query: 1100 GSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLP 1159
++ + A ++G+Y C + V + + +
Sbjct: 76 ENKQNE--------WITEKAEATNTGKYTCTNKH---GLSNSIYVFVRDPAKLFLVDR-- 122
Query: 1160 DSMSAEKLKELEKNYTPEEIEEDEIP--EEPPRLNQSRYKKQNQSAWYDSELSEYQKERA 1217
+ +E + + P + K L + +
Sbjct: 123 -------------SLYGKEDNDTLVRCPLTDPEVTNYSLKGCQ-----GKPLPKDLRFIP 164
Query: 1218 NESTELEKHDIVTESQLPDSMS---AEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESV 1274
+ + + + + + ++ + P S
Sbjct: 165 DPKAGIMIKSVKRAY---HRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASY 221
Query: 1275 TVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFP--FINISTAFLIFNFCLHAVIFSHP 1332
++E E ++ V + + + + ++
Sbjct: 222 LLREGEEFTVTCTIK-DVSSSVYST------WKRENSQTKLQEKYNSWHHGDFNYERQA- 273
Query: 1333 IFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKT 1392
+L I D G ++C A N G A T+ I + +
Sbjct: 274 -------TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMIN------ 320
Query: 1393 EALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPV 1452
+ +++ + + + +
Sbjct: 321 --------------TTVFVNDGE--------------------------NVDLIVEYE-- 338
Query: 1453 GDPN-MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-----VYPEDSGEYLCRATNLY 1506
P +W + K P + + + G Y +N
Sbjct: 339 AFPKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSD 398
Query: 1507 GMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFV 1566
+ V P +
Sbjct: 399 VNAAIAFNVY-------------------------------------V-----NTKPEIL 416
Query: 1567 SQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE-----IVRKITATETTEME 1620
+ C G+P P + W T V T +
Sbjct: 417 TYD------RLVNGMLQCV-AAGFPEPTIDWYFCPGTEQRCSASVLPVDVQTLNSSGPPF 469
Query: 1621 HKGKIQERVVDASEK 1635
K +Q + ++ K
Sbjct: 470 GKLVVQSSIDSSAFK 484
Score = 60.8 bits (147), Expect = 3e-09
Identities = 20/201 (9%), Positives = 37/201 (18%), Gaps = 69/201 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L + + + G Y N A + V
Sbjct: 376 ELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNV------------YV-------------- 409
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
P +T + + +C A G P +
Sbjct: 410 ----------------------NTKPEILTYDRLVNG-------MLQCVAA--GFPEPTI 438
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGW------------VYPEDSGEYLCRATNLYG 1507
+W+ + D + + + +G C+A N G
Sbjct: 439 DWYFCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVG 498
Query: 1508 MDETRAILKTTGKPGIIYESQ 1528
G
Sbjct: 499 KTSAYFNFAFKGNNKEQIHPH 519
Score = 44.7 bits (105), Expect = 3e-04
Identities = 11/77 (14%), Positives = 20/77 (25%), Gaps = 23/77 (29%)
Query: 1808 EDSGAYECVAM----NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKD 1863
+ + CV + G ++ S P++ D
Sbjct: 5 RGAWDFLCVLLLLLRVQTGSSQPSVSPGEPSP-------------------PSIHPGKSD 45
Query: 1864 QNVKEGSAVTLKCRITG 1880
V+ G + L C G
Sbjct: 46 LIVRVGDEIRLLCTDPG 62
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta
trefoil, IG domain, growth factor/growth factor receptor
complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 334
Score = 152 bits (385), Expect = 2e-40
Identities = 60/325 (18%), Positives = 94/325 (28%), Gaps = 57/325 (17%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIV----------------- 1604
Q E G+ C G P +W+ +G +V
Sbjct: 9 GPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNA 68
Query: 1605 -------------NEIVRKITATETTEMEHKGKIQERVVDASEKP---AKPPVFTKKI-- 1646
+ E D +E P +T+
Sbjct: 69 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERM 128
Query: 1647 --QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPIT-SSPDFQIHTFSTKSILIMRQVF 1703
+ + RF G+P P+I W + I + L+M V
Sbjct: 129 DKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVV 188
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFD 1763
D G + + EN+ G + + L V E R P ++ +G F
Sbjct: 189 PSDRGNYTCVVENKFGSIRQTYTLDVLE-----RSPHRPILQAGLPANQTAVLGSDVEFH 243
Query: 1764 AKISATKPLDVYWLK----NGKKIIPDIRY---------KTLEEDNLFTLLIIEAVVEDS 1810
K+ + + WLK NG K+ PD + L L + ED+
Sbjct: 244 CKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDA 303
Query: 1811 GAYECVAMNNAGEARCEAELVVQSK 1835
G Y C+A N+ G + A LVV
Sbjct: 304 GEYTCLAGNSIGFSHHSAWLVVLPA 328
Score = 142 bits (359), Expect = 7e-37
Identities = 40/268 (14%), Positives = 72/268 (26%), Gaps = 35/268 (13%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
P + + D G P+ W ++ + S +
Sbjct: 2 GRAAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGP- 60
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV-----------EEKRQGGRGGV 1740
L + EDSG ++ + V E++ +
Sbjct: 61 ---QRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDT 117
Query: 1741 VPPSFL----TTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLE-ED 1795
P + + RF + + WLKNG++ + R ++
Sbjct: 118 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRH 177
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAP 1855
++L++ V D G Y CV N G R L V +
Sbjct: 178 QQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL--------------ERSPHRPI 223
Query: 1856 TVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
A +Q GS V C++ +
Sbjct: 224 LQAGLPANQTAVLGSDVEFHCKVYSDAQ 251
Score = 130 bits (329), Expect = 5e-33
Identities = 60/348 (17%), Positives = 90/348 (25%), Gaps = 63/348 (18%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ P + Q + + C P G P W +G L R G
Sbjct: 6 EVPGPEPGQQEQLVFGSGDAVELSCP-PPGGGPMGPTVWVKDGTGLVPSER----VLVGP 60
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+ EDSG Y CR + ++ T +
Sbjct: 61 QRLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPS-----------------SGDD 103
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGH 1601
E + V+ P + V RF C G P P + WL NG
Sbjct: 104 EDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRC-PAAGNPTPSISWLKNGR 162
Query: 1602 TIVNEIVRKITAT---------ETTEMEHKGK---------------IQERVVDASEKPA 1637
E E+ +G V++ S P
Sbjct: 163 EFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS--PH 220
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE-------------DFPITSSP 1684
+P + A F + D P I+W + +
Sbjct: 221 RPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKT 280
Query: 1685 DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
T +L + V ED+G + +A N G + SA LVV
Sbjct: 281 AGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPA 328
Score = 130 bits (327), Expect = 1e-32
Identities = 65/340 (19%), Positives = 97/340 (28%), Gaps = 66/340 (19%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P Q G+ P G ++ +G + S R+
Sbjct: 8 PGPEPGQQEQLVFGSGDAVELSCP-PPGGGPMGPTVWVKDGTGLVPSERVLVGPQ----R 62
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQ----------------PPKF 411
L++L ED+G Y+CR S G P +
Sbjct: 63 LQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYW 122
Query: 412 TSHI---KSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVS-DFGF 466
T K L + ++ F C P +P + W NG+ ++R+ +
Sbjct: 123 TRPERMDKKLLAVPAANTVRFRC---PAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQ 179
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNLD 515
+ + V D G Y C N F + P + LP+ N
Sbjct: 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQ--AGLPA----NQT 233
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWF----FNGRPF-ATGSRVKTVYDFGFISLDMDY-- 568
V F C+ SD I W NG G+ TV +
Sbjct: 234 AVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELE 291
Query: 569 ------VYARDSGEYICRATNKWGTAMTKAKVICKVLTVI 602
V D+GEY C A N G + A L V+
Sbjct: 292 VLSLHNVTFEDAGEYTCLAGNSIGFSHHSAW-----LVVL 326
Score = 123 bits (311), Expect = 1e-30
Identities = 63/351 (17%), Positives = 90/351 (25%), Gaps = 98/351 (27%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
++ ED G YSCR +
Sbjct: 64 QVLNASHEDSGAYSCRQRLTQRVLCHFSV------------------------------- 92
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFL----TTPTDLTLAESTLAHFEC 938
R D + + E E AP + L + + F C
Sbjct: 93 -------RVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRC 145
Query: 939 RLTPTNDPSMTVEWFHNGKALSAGSRIKTIN-DFGFVILEINDVYLRDSGLYTCKATNKH 997
+P+ ++ W NG+ RI I L + V D G YTC NK
Sbjct: 146 P--AAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKF 203
Query: 998 GEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFT 1057
G + L V E P+ P+
Sbjct: 204 GSIRQTYTLDVL--------------------------------------ERSPHRPILQ 225
Query: 1058 SQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF----FNGRPF-ATGSRVKTVYDFGFI 1112
+ L N V F C+ SD I W NG G+ TV
Sbjct: 226 AGLPANQTAVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGA 283
Query: 1113 SLDMDY--------VYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTE 1155
+ V D+GEY C A N G + A ++ + + E
Sbjct: 284 NTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEELVE 334
Score = 121 bits (304), Expect = 1e-29
Identities = 51/254 (20%), Positives = 74/254 (29%), Gaps = 34/254 (13%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
L C P W +G L R+ L
Sbjct: 9 GPEPGQQEQLVFGSGDAVELSCPPPGGG-PMGPTVWVKDGTGLVPSERVLVGPQ----RL 63
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
++ + DSG Y+C+ D E
Sbjct: 64 QVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDED------------------ 105
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQD---NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 1093
+DE P +T + L VP A V F C +PT I W N
Sbjct: 106 ---GEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRC--PAAGNPTPSISWLKN 160
Query: 1094 GRPFATGSRVK-TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAK--VICKAKH 1150
GR F R+ SL M+ V D G Y C NK+G+ V+ ++ H
Sbjct: 161 GREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPH 220
Query: 1151 DIVTESQLPDSMSA 1164
+ ++ LP + +A
Sbjct: 221 RPILQAGLPANQTA 234
Score = 118 bits (297), Expect = 8e-29
Identities = 53/286 (18%), Positives = 91/286 (31%), Gaps = 40/286 (13%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATT---- 291
+ T W + L + L ++ A EDSG Y+ + ++
Sbjct: 38 MGPTVWVKDGTGLVPSERVLVGPQ----RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVR 93
Query: 292 ----------SGTLKCLERLFVNHNYPLFSLQFQ---HLSNLSEGEIAHFEASLIPVGDQ 338
E V+ P ++ + L + F G+
Sbjct: 94 VTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCP--AAGNP 151
Query: 339 TMTVEFLYNGKPIEASHRI-RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
T ++ +L NG+ HRI L + D G YTC NK+G +
Sbjct: 152 TPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYT 211
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH----NGKPI- 452
L+ +++S +P + G F C +D + ++W NG +
Sbjct: 212 LDVLERSPHRPILQAGLPANQT-AVLGSDVEFHC--KVYSDAQPHIQWLKHVEVNGSKVG 268
Query: 453 --------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
K +D V+ + V D+GEY C A N+
Sbjct: 269 PDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSI 314
Score = 117 bits (293), Expect = 3e-28
Identities = 63/342 (18%), Positives = 90/342 (26%), Gaps = 87/342 (25%)
Query: 405 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
+ P + GD+ C P W +G + RV +
Sbjct: 4 AAEVPGPEPGQQEQLVFGSGDAVELSCPPPGGG-PMGPTVWVKDGTGLVPSERVLVGPQ- 61
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNF-----------------------------IFIPP 495
+ + DSG Y CR
Sbjct: 62 ---RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTG 118
Query: 496 FPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK- 554
P + R + L VP A V F C +PT I W NGR F R+
Sbjct: 119 APYW----TRPERMDKKLLAVPAANTVRFRC--PAAGNPTPSISWLKNGREFRGEHRIGG 172
Query: 555 TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI------------------- 595
SL M+ V D G Y C NK+G+ +
Sbjct: 173 IKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQ 232
Query: 596 -----------CKVL---TVIVEWF----YNGKKLPHGHRYRT---------FHDFGIVI 628
CKV ++W NG K+ D + +
Sbjct: 233 TAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEV 292
Query: 629 LDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILE 670
L + E++G Y C A N G A L + ++E
Sbjct: 293 LSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPAEEELVE 334
Score = 106 bits (265), Expect = 1e-24
Identities = 60/330 (18%), Positives = 89/330 (26%), Gaps = 76/330 (23%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P P W K+G L R+ G L + + +DS Y+C+
Sbjct: 33 PGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLTQRVLC 88
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
+ ++ +A D P R + + +
Sbjct: 89 HFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMD-----------KKLLAVPA 137
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS-DFG 181
V F C G +P + W NG+ ++R+ +
Sbjct: 138 ANTVRFRCPAA---------G----------NPTPSISWLKNGREFRGEHRIGGIKLRHQ 178
Query: 182 FVVMDIAYVQSHDSGEYVCQWFVNNK--------------------PLPAGAKFKTTHDF 221
+ + V D G Y C V NK L AG T
Sbjct: 179 QWSLVMESVVPSDRGNYTCV--VENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVL 236
Query: 222 GYVALDIELMLKTL---VPFTEWF----VNNKPLPAGAKFKTT---------HDFGYVAL 265
G D+E K P +W VN + T D L
Sbjct: 237 GS---DVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVL 293
Query: 266 DIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ ED+G YT A NS G + S L
Sbjct: 294 SLHNVTFEDAGEYTCLAGNSIGFSHHSAWL 323
Score = 105 bits (262), Expect = 3e-24
Identities = 47/355 (13%), Positives = 75/355 (21%), Gaps = 120/355 (33%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFIN-------- 1312
E P + E + + V C
Sbjct: 5 AEVPGPEPGQQEQLVFGSGDAVELS--------------CPPPGGGPMGPTVWVKDGTGL 50
Query: 1313 -ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
S L+ L + ED G Y CR +
Sbjct: 51 VPSERVLVGPQRLQ-----------------VLNASHEDSGAYSCRQRLTQRVLCHFS-- 91
Query: 1372 SCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQI 1431
+ + ED + P +
Sbjct: 92 ----------------------VRVTDAPSSGDDEDGEDEAEDTGVDTG---APYWTRPE 126
Query: 1432 KTQDQLVEM---QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFG 1488
+ +L+ + + +F C G+P + W NG+ ++R G +
Sbjct: 127 RMDKKLLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHR-----IGGIKLRHQQ 179
Query: 1489 W------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
W V P D G Y C N +G L
Sbjct: 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD-------------------------- 213
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWL 1597
V + P + P Q G F +V +P + WL
Sbjct: 214 -----------VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWL 257
Score = 102 bits (254), Expect = 4e-23
Identities = 58/366 (15%), Positives = 89/366 (24%), Gaps = 112/366 (30%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYV 569
Q+ L V C P P W +G RV L +
Sbjct: 14 QQEQLVFGSGDAVELSCPP-PGGGPMGPTVWVKDGTGLVPSERVLVGPQ----RLQVLNA 68
Query: 570 YARDSGEYICRATNKWGTAMTKAKVIC--------------------------------- 596
DSG Y CR + +
Sbjct: 69 SHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERM 128
Query: 597 --KVLTVI------------------VEWFYNGKKLPHGHR-YRTFHDFGIVILDILYCY 635
K+L V + W NG++ HR L +
Sbjct: 129 DKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVV 188
Query: 636 EENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRR 695
+ G Y C NK+GS +L +LE
Sbjct: 189 PSDRGNYTCVVENKFGSIRQTYTLD-------VLER------------------------ 217
Query: 696 TETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWF----WNGKPMK 751
+ + +N G + F + D + ++W NG +
Sbjct: 218 ------SPHRPILQAGLPANQT-AVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVG 268
Query: 752 TGSRFRT---------FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
D +L + V ED G+Y+C A N G + SA + V
Sbjct: 269 PDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLPA 328
Query: 803 RSIILE 808
++E
Sbjct: 329 EEELVE 334
Score = 101 bits (253), Expect = 5e-23
Identities = 50/356 (14%), Positives = 78/356 (21%), Gaps = 84/356 (23%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + V C P W +G +
Sbjct: 9 GPEPGQQEQLVFGSGDAVELSCPPPGGG------------------PMGPTVWVKDGTGL 50
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC------QWFVNNKPLPAGAKFKTTHDFG 222
RV + + + DSG Y C + + A + G
Sbjct: 51 VPSERVLVGPQ----RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSSGDDEDG 106
Query: 223 YVALDIELMLKTLVPFTE--------------------------------WFVNNKPLPA 250
+ + +T W N +
Sbjct: 107 EDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRG 166
Query: 251 GAKFKTTH-DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPL 309
+ +L + D G YT N GS + TL LER H L
Sbjct: 167 EHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER--SPHRPIL 224
Query: 310 FSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTV----EFLYNGKPIEASHRIRT------ 359
+ + + G F D + NG +
Sbjct: 225 QAGLPANQT-AVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTA 281
Query: 360 ---VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT 412
+ VL + ED G YTC A N G + S L + +
Sbjct: 282 GANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVLP-----AEEEL 332
Score = 99.7 bits (248), Expect = 2e-22
Identities = 50/321 (15%), Positives = 82/321 (25%), Gaps = 87/321 (27%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
W +G L R L +L E+SG Y CR +
Sbjct: 41 TVWVKDGTGLVPSERVLVGPQ----RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTD 96
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL--- 719
+ ++ D AP +T P L
Sbjct: 97 APSS---------------------GDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAV 135
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR-FRTFCDFGFVILEISPVYPEDCG 778
F +P + W NG+ + R L + V P D G
Sbjct: 136 PAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRG 193
Query: 779 QYSCRAYNDYGEAVTSASM--------------------------------KVQG----- 801
Y+C N +G + ++ KV
Sbjct: 194 NYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPH 253
Query: 802 ----KRSIILESQLPKGMEVFISFHE---------------ISPVYPEDCGQYSCRAYND 842
K + S++ +++ + + V ED G+Y+C A N
Sbjct: 254 IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNS 313
Query: 843 YGEAVTSASMKVQGKRSIILE 863
G + SA + V ++E
Sbjct: 314 IGFSHHSAWLVVLPAEEELVE 334
Score = 75.8 bits (186), Expect = 2e-14
Identities = 35/219 (15%), Positives = 58/219 (26%), Gaps = 71/219 (32%)
Query: 806 ILESQLPKGMEVFISFH--EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE 863
G+++ + V P D G Y+C N +
Sbjct: 164 FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKF-------------------- 203
Query: 864 SQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTP 923
G+I + L D +E + P
Sbjct: 204 --------GSIRQTYTL--------------------------DVLERSPHRPILQAGLP 229
Query: 924 TDLTLAESTLAHFECRLTPTNDPSMTVEWFH----NGKALSAGSRI---------KTIND 970
+ T + F C+ +D ++W NG + D
Sbjct: 230 ANQTAVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTD 287
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+L +++V D+G YTC A N G + S L V
Sbjct: 288 KELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVVL 326
Score = 68.1 bits (166), Expect = 6e-12
Identities = 35/201 (17%), Positives = 51/201 (25%), Gaps = 61/201 (30%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
SL ++ V P D+G Y C N G T+
Sbjct: 181 SLVMESVVPSDRGNYTCVVENKFGSIRQTYTL---------------------------- 212
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMK 1458
D+ E +P +Q + +F C+ D
Sbjct: 213 ---------------DVLERSPHRPILQAG--LPANQTAVLGSDVEFHCK--VYSDAQPH 253
Query: 1459 VEWF----LNGKPLPHKNRFNPIYDFGYVAMNFGW---------VYPEDSGEYLCRATNL 1505
++W +NG + A V ED+GEY C A N
Sbjct: 254 IQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNS 313
Query: 1506 YGMDETRAILKTTGKPGIIYE 1526
G A L + E
Sbjct: 314 IGFSHHSAWLVVLPAEEELVE 334
Score = 58.5 bits (141), Expect = 9e-09
Identities = 16/100 (16%), Positives = 23/100 (23%), Gaps = 5/100 (5%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+ P G+ P P W +G + R
Sbjct: 6 EVPGPEPGQQEQLVFGSGDAVELSCPP-PGGGPMGPTVWVKDGTGLVPSERVLVGPQ--- 61
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
L++ ED G YSCR + S
Sbjct: 62 -RLQVLNASHEDSGAYSCRQRLTQRVLCHFSVRVTDAPSS 100
Score = 50.8 bits (121), Expect = 2e-06
Identities = 20/121 (16%), Positives = 30/121 (24%), Gaps = 24/121 (19%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----DPRLRVECSLSTAFFFPFI 1311
P P + T V F +V P + + + +
Sbjct: 219 PHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVL 278
Query: 1312 NISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
+ D L + V ED GEY C A N G + A +
Sbjct: 279 KTA---------------GANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWL 323
Query: 1372 S 1372
Sbjct: 324 V 324
Score = 50.0 bits (119), Expect = 5e-06
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 2 EPRADPNLKIEWFK----NGVPLSLGSRIRST---------FDFGLVTLSINSLRADDSA 48
+ +D I+W K NG + T D L LS++++ +D+
Sbjct: 245 KVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAG 304
Query: 49 IYTCKATNLLGEAVSTCTLKIED 71
YTC A N +G + + L +
Sbjct: 305 EYTCLAGNSIGFSHHSAWLVVLP 327
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex,
beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo
sapiens}
Length = 339
Score = 150 bits (381), Expect = 8e-40
Identities = 43/265 (16%), Positives = 80/265 (30%), Gaps = 24/265 (9%)
Query: 1628 RVVDASEKPAKPPVFTKKIQPCRAFEQDQARFE-------VEFDGDPLPTIKWFREDFPI 1680
+ + + + E + + P + W + D
Sbjct: 7 QPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSAR 66
Query: 1681 TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGV 1740
T + + ++ L + EDSG + N K S L V E +
Sbjct: 67 TVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFI 126
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
P LT +S V+ + + W K+ + D L
Sbjct: 127 SYPQILTLSTSGVL---VCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTT-HL 182
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEP 1860
L+ + +ED+G Y CV + ++ + ++ P + P
Sbjct: 183 LVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRI----------KKKKEETIPVIISP 232
Query: 1861 LKDQNVKEGSAVTLKCRI---TGKP 1882
LK + GS +T+ C++ TG P
Sbjct: 233 LKTISASLGSRLTIPCKVFLGTGTP 257
Score = 124 bits (311), Expect = 1e-30
Identities = 49/336 (14%), Positives = 89/336 (26%), Gaps = 44/336 (13%)
Query: 294 TLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPV-----GDQTMTVEFLYNG 348
TL+ + ++ EGE +P + + + N
Sbjct: 5 TLQPAAHTGAARSCRFRGRHYKR-EFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKND 63
Query: 349 KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQP 408
T L +L ED+G Y C N ++S+ L +
Sbjct: 64 SARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFEN----T 119
Query: 409 PKFTSHIKSLEGLKDGDSAHFEC---TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
F I + L S C + + ++K++W+ + + N K +S G
Sbjct: 120 DAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRG 178
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDN 513
+ + V D+G Y C + I I P
Sbjct: 179 TTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL---KT 235
Query: 514 LDVPEAGKVHFDCR-LEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGFI--------- 562
+ ++ C+ P + W+ N + V +
Sbjct: 236 ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY 295
Query: 563 ---SLDMDYVYARDSG-EYICRATNKWGTAMTKAKV 594
L D V D ++ C N + V
Sbjct: 296 IEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331
Score = 122 bits (307), Expect = 4e-30
Identities = 43/329 (13%), Positives = 94/329 (28%), Gaps = 49/329 (14%)
Query: 1549 TPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CT------RVTGYPRPRVMWLINGH 1601
T + + + + EGEP C + PR + W N
Sbjct: 5 TLQPAAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDS 64
Query: 1602 TIV--NEIVRKITATETT------EMEHKG---------------KIQERVVDASEKPAK 1638
E ++ A + E G I+ RV + ++
Sbjct: 65 ARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLP 124
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
+ + + + I+W+++ + + + T +L+
Sbjct: 125 FISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLV 184
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 1758
V +ED+G + + + + +E + + + P ++ + + ++G
Sbjct: 185 -HDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKK-KKEETIPVIISPLKTISASLGS 242
Query: 1759 LARFDAKISATK----PLDVYWLKNGKKI-----------IPDIRYKTLEEDNLFTLLII 1803
K+ ++W N I P Y E+ + LI
Sbjct: 243 RLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIF 302
Query: 1804 EAV-VEDSGA-YECVAMNNAGEARCEAEL 1830
+ V ED ++CV N +
Sbjct: 303 DPVTREDLHMDFKCVVHNTLSFQTLRTTV 331
Score = 116 bits (291), Expect = 5e-28
Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 30/274 (10%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W N+ + +T AL ++ A EDSG Y N+ S L+
Sbjct: 55 INLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELR 114
Query: 297 CLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFE---ASLIPVGDQTMTVEFLYNGKPIEA 353
V N F + L+ S + +++ + ++
Sbjct: 115 ------VFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDK 168
Query: 354 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE----ISVNLECVDKSKGQPP 409
+ + + G L + +ED G Y C T + S+ L K + P
Sbjct: 169 DNE-KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIP 227
Query: 410 KFTSHIKSLEGLKDGDSAHFECT-LTPVNDPELKVEWF-HNGKPI--------FHKNRVK 459
S +K++ G C P + W+ N I + +
Sbjct: 228 VIISPLKTIS-ASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQ 286
Query: 460 MVSDFGFVVMD----IAYVQSHDSG-EYVCRAWN 488
S+ ++ V D ++ C N
Sbjct: 287 EYSENNENYIEVPLIFDPVTREDLHMDFKCVVHN 320
Score = 104 bits (261), Expect = 5e-24
Identities = 49/365 (13%), Positives = 81/365 (22%), Gaps = 115/365 (31%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTD-----DPKLKVEWFWNGKPMKTGSRFRTFC 760
L EGE P P++ + W N T
Sbjct: 18 CRFRGRHYKREFRL-EGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRM 76
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---------- 810
L + P ED G Y C N S ++V L
Sbjct: 77 WAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLST 136
Query: 811 -----------------------------LPKGMEVFISFHE-----ISPVYPEDCGQYS 836
L K E F+S + V ED G Y
Sbjct: 137 SGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYR 196
Query: 837 CRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIA 896
C + + + RSI L +
Sbjct: 197 CVLTFAHEGQQYNIT------RSIELRIK------------------------------- 219
Query: 897 ELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECR-LTPTNDPSMTVEWF-H 954
++ P ++ ++ + + C+ T P T+ W+
Sbjct: 220 -------------KKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTA 266
Query: 955 NGKALSAGSRIKTIND------------FGFVILEINDVYLRDSGL-YTCKATNKHGEAT 1001
N + + + + + V L + V D + + C N T
Sbjct: 267 NDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQT 326
Query: 1002 TSCKL 1006
+
Sbjct: 327 LRTTV 331
Score = 104 bits (260), Expect = 6e-24
Identities = 49/336 (14%), Positives = 85/336 (25%), Gaps = 104/336 (30%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
+ P ED G Y C N S ++V L
Sbjct: 85 LLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISY---------------- 128
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
P+ LT T L L+ F
Sbjct: 129 ---------------------------------PQILTLSTSGVLVCPDLSEF-----TR 150
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ + ++W+ + L + K ++ G L ++DV L D+G Y C T H +
Sbjct: 151 DKTDVKIQWYKDSLLLDKDNE-KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYN 209
Query: 1004 CKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDN 1063
+++ R I +++ PV S L+
Sbjct: 210 ITRSIELR---------------------------------IKKKKEETIPVIISPLKT- 235
Query: 1064 LDVPEAGKVHFDCR-LEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGFI--------- 1112
+ ++ C+ P + W+ N + V +
Sbjct: 236 ISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENY 295
Query: 1113 ---SLDMDYVYARDSG-EYICRATNKWGTAMTKAKV 1144
L D V D ++ C N + V
Sbjct: 296 IEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331
Score = 99.0 bits (246), Expect = 4e-22
Identities = 47/333 (14%), Positives = 79/333 (23%), Gaps = 90/333 (27%)
Query: 522 VHFDCRLEPKS-----DPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGE 576
V C P P + + W N +T +L + DSG
Sbjct: 36 VALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGT 95
Query: 577 YICRATNKWGTAMTKAKV---------------------------ICKVLTVI------- 602
Y+C N ++ +C L+
Sbjct: 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV 155
Query: 603 -VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
++W+ + L + G L + E++G Y C T + +
Sbjct: 156 KIQWYKDSLLLDKDNEKFLSVR-GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITR-- 212
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
+ LR + + PV PL I
Sbjct: 213 ----------------------------SIELRIKKKKE---ETIPVIISPLKTIS-ASL 240
Query: 722 GENAHFEAR-LTPTDDPKLKVEWFWNGKPM----------KTGSRFRTFCD---FGFVIL 767
G + T P + W+ G R + + V L
Sbjct: 241 GSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPL 300
Query: 768 EISPVYPEDCG-QYSCRAYNDYGEAVTSASMKV 799
PV ED + C +N ++K
Sbjct: 301 IFDPVTREDLHMDFKCVVHNTLSFQTLRTTVKE 333
Score = 97.1 bits (241), Expect = 2e-21
Identities = 31/236 (13%), Positives = 48/236 (20%), Gaps = 50/236 (21%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTN-----DPSMTVEWFHNGKALSAGSRIKTIN 969
E C P P + + W N A + +T
Sbjct: 17 SCRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRM 76
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATK 1029
L + DSG Y C N S +L V
Sbjct: 77 WAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRV--------------------- 115
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRL---EPKSDPTM 1086
N F + + + C + +
Sbjct: 116 --------------------FENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV 155
Query: 1087 RIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
+I W+ + + G L + V D+G Y C T
Sbjct: 156 KIQWYKDSLLLDKDNEKFLSVR-GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNI 210
Score = 94.4 bits (234), Expect = 1e-20
Identities = 48/340 (14%), Positives = 82/340 (24%), Gaps = 55/340 (16%)
Query: 99 KDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELK 158
H E E V C P P +
Sbjct: 9 AAHTGAARSCRFRGRHYKREFRLEGEPVALRCPQVPYWLWA------------SVSPRIN 56
Query: 159 VEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK----------- 207
+ W N + + + DSG YVC N
Sbjct: 57 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCT--TRNASYCDKMSIELR 114
Query: 208 ---PLPAGAKFKTTHDFGYVALDIELMLKTLV--------PFTEWFVNNKPLPAGAKFKT 256
A F + ++ L+ L +W+ ++ L + K
Sbjct: 115 VFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE-KF 173
Query: 257 THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNY--PLFSLQF 314
G L + ED+G Y T + + T R+ P+
Sbjct: 174 LSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPL 233
Query: 315 QHLSNLSEGEIAHFEAS-LIPVGDQTMTVE-FLYNGKPIEASHRIRTVH----------- 361
+ +S S G + G T+ + N IE+++ V
Sbjct: 234 KTIS-ASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENN 292
Query: 362 -AFGMVVLEILGTKIEDTGV-YTCRATNKWGQAEISVNLE 399
+ V L ED + + C N + ++
Sbjct: 293 ENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332
Score = 93.6 bits (232), Expect = 3e-20
Identities = 40/324 (12%), Positives = 73/324 (22%), Gaps = 80/324 (24%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVN-----DPELKVEWFHNGKPIFHKNRVKMVS 462
H K L+ G+ C P P + + W N +
Sbjct: 18 CRFRGRHYKREFRLE-GEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRM 76
Query: 463 DFGFVVMDIAYVQSHDSGEYVCRAWN---------NFIFIPPFPIFIFHQIRLPSPSQDN 513
+ + DSG YVC N F
Sbjct: 77 WAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAF-------LPFISYP 129
Query: 514 LDVPEAGKVHFDCRL---EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
+ + C + ++I W+ + + G L + V
Sbjct: 130 QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLSVR-GTTHLLVHDVA 188
Query: 571 ARDSGEYICRATNKWG------TAMTKAKVI----------------------------C 596
D+G Y C T T + ++ C
Sbjct: 189 LEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPC 248
Query: 597 KVLT-------VIVEWFYNGKKLPHGHRYRTFHD------------FGIVILDILYCYEE 637
KV ++ W N + + + + V L E
Sbjct: 249 KVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTRE 308
Query: 638 NSGV-YECRATNKYGSDVTKASLK 660
+ + ++C N + ++K
Sbjct: 309 DLHMDFKCVVHNTLSFQTLRTTVK 332
Score = 92.1 bits (228), Expect = 8e-20
Identities = 49/359 (13%), Positives = 86/359 (23%), Gaps = 96/359 (26%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPV-----GDPNMKVEWFLNGKPLPHKNRFNP 1476
+ K + + +E + C P P + + W N
Sbjct: 16 RSCRFRGRHYKREFR-LEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEET 74
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSI 1536
A+ EDSG Y+C N D+ L+
Sbjct: 75 RMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELR-------------------- 114
Query: 1537 EKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTR----VTGYPR 1591
V E F+S P Q + C
Sbjct: 115 -----------------VF-ENTDAFLPFISYP--QILTLSTSGVLVCPDLSEFTRDKTD 154
Query: 1592 PRVMWLINGHTIVNEIVRKITATETT-------EMEHKGK-------------------I 1625
++ W + + + + ++ TT +E G I
Sbjct: 155 VKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSI 214
Query: 1626 QERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFE---VEFDGDPLPTIKWFRED----- 1677
+ R+ +K PV ++ A + G PL T+ W+ +
Sbjct: 215 ELRIK--KKKEETIPVIISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIE 272
Query: 1678 -----FPITSSPDFQIHT---FSTKSILIMRQVFMEDSGV-FAVIAENRGGKAKCSANL 1727
+T P + + LI V ED + F + N +
Sbjct: 273 SAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331
Score = 90.9 bits (225), Expect = 2e-19
Identities = 40/332 (12%), Positives = 79/332 (23%), Gaps = 88/332 (26%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
P + + W KN ++ + L + +DS Y C N
Sbjct: 50 SVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKM 109
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
+ L++ E
Sbjct: 110 SIELRV---------------------FENTDAFLPFISYPQ------------------ 130
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
+ S + L + ++K++W+ + + N K +S G
Sbjct: 131 -------ILTLSTSGVLVCPDLSE--FTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRGTT 180
Query: 184 VMDIAYVQSHDSGEYVC-----------------QWFVNNKPLPAGAKFKTTHDFGYVAL 226
+ + V D+G Y C + + K + +L
Sbjct: 181 HLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASL 240
Query: 227 DIELMLKTLVPFTE--------WFVNNKPLPA----------GAKFKTTHD---FGYVAL 265
L + V W+ N G + + + + + V L
Sbjct: 241 GSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPL 300
Query: 266 DIVGAYAEDSGI-YTVKATNSKGSATTSGTLK 296
ED + + N+ T T+K
Sbjct: 301 IFDPVTREDLHMDFKCVVHNTLSFQTLRTTVK 332
Score = 87.8 bits (217), Expect = 2e-18
Identities = 41/289 (14%), Positives = 69/289 (23%), Gaps = 87/289 (30%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L + ED G YVC N + +V
Sbjct: 82 ALWLLPALQEDSGTYVCTTRNASYCDKMSIEL------------RV-------------- 115
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFEC---QLAPVGDPN 1456
+ F+ I L S C +
Sbjct: 116 ---------------------FENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTD 154
Query: 1457 MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+K++W+ + L N + G + V ED+G Y C T + +
Sbjct: 155 VKIQWYKDSLLLDKDNE-KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITR- 212
Query: 1517 TTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQE 1576
+ E ++ +K + PV +S +
Sbjct: 213 --------------------------------SIELRIKKKKEETIPVIISPLKTISASL 240
Query: 1577 GEPARF-CT--RVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHK 1622
G C TG P ++W T + TE E+
Sbjct: 241 GSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYS 289
Score = 78.2 bits (192), Expect = 4e-15
Identities = 30/214 (14%), Positives = 53/214 (24%), Gaps = 45/214 (21%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ W N T L +L +E+SG Y C N D L+
Sbjct: 57 LTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVF 116
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
T F +S L
Sbjct: 117 ENT-----------------------------------------DAFLPFISYPQILTLS 135
Query: 723 ENAHFE---ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
+ D +K++W+ + + + + G L + V ED G
Sbjct: 136 TSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRGTTHLLVHDVALEDAGY 194
Query: 780 YSCRAYNDYGEAVTSASMKVQGKRSIILESQLPK 813
Y C + + + ++ + E +P
Sbjct: 195 YRCVLTFAHEGQQYNITRSIELRIKKKKEETIPV 228
Score = 76.6 bits (188), Expect = 1e-14
Identities = 35/203 (17%), Positives = 66/203 (32%), Gaps = 38/203 (18%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
R ++KI+W+K+ + L + + G L ++ + +D+ Y C T
Sbjct: 148 FTRDKTDVKIQWYKDSLLLDKDNE-KFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQ 206
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
T IE R ++K + E + PV IS L +
Sbjct: 207 QYNITRSIELR------------------------IKKKKEETI---PVIISPLKTISAS 239
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD-- 179
+ C+V G L T+ + +E + G + R + +
Sbjct: 240 LGSRLTIPCKVFLGT------GTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNE 293
Query: 180 -FGFVVMDIAYVQSHDSG-EYVC 200
+ V + V D ++ C
Sbjct: 294 NYIEVPLIFDPVTREDLHMDFKC 316
Score = 69.7 bits (170), Expect = 2e-12
Identities = 44/346 (12%), Positives = 91/346 (26%), Gaps = 41/346 (11%)
Query: 1044 LIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKS-----DPTMRIDWFFNGRPFA 1098
+ + E V C P P + + W N
Sbjct: 9 AAHTGAARSCRFRGRHYKREF-RLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSART 67
Query: 1099 TGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQL 1158
+T +L + DSG Y+C N ++ D
Sbjct: 68 VPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLP--- 124
Query: 1159 PDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--DSELSEYQKER 1216
+S ++ L + + E + + WY L + ++
Sbjct: 125 --FISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQ---------WYKDSLLLDKDNEKF 173
Query: 1217 --ANESTELEKHDIVTESQLPDS-------MSAEKLKELEKNYTPEEIEEDEIPEEPPRF 1267
+T L +V + L D+ A + ++ + E + + E P
Sbjct: 174 LSVRGTTHL----LVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVI 229
Query: 1268 ITEIESVTVQEAEPVRFETRVEPRV-DPRLRVECSLSTAFFFPFINISTAFLIFNFCLHA 1326
I+ +++++ + +V P + +
Sbjct: 230 ISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPR---- 285
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQG-EYVCRAYNDHGEAFTKATI 1371
+S + V L D V ED ++ C +N + T+
Sbjct: 286 QEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRTTV 331
Score = 67.4 bits (164), Expect = 1e-11
Identities = 27/202 (13%), Positives = 50/202 (24%), Gaps = 55/202 (27%)
Query: 1330 SHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGM 1389
+ G L + V ED G Y C H T +I+L+
Sbjct: 171 EKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITR------SIELR------- 217
Query: 1390 LKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQ- 1448
+ + +++ P ++ +KT C+
Sbjct: 218 --------------------------IKKKKEETIPVIISPLKTIS-ASLGSRLTIPCKV 250
Query: 1449 LAPVGDPNMKVEWFL-NGKPLPHKNRFNPIYDFGYVAMNFGW------------VYPEDS 1495
G P + W+ N + + + + V ED
Sbjct: 251 FLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDL 310
Query: 1496 G-EYLCRATNLYGMDETRAILK 1516
++ C N R +K
Sbjct: 311 HMDFKCVVHNTLSFQTLRTTVK 332
Score = 45.1 bits (106), Expect = 1e-04
Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFD---FGLVTLSINSLRADDS-AIYTCKATNLLGEAVS 63
+ IE G ++ G R + + + V L + + +D + C N L
Sbjct: 268 DTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTL 327
Query: 64 TCTLKIEDRH 73
T+K H
Sbjct: 328 RTTVKEHHHH 337
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM;
2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4
PDB: 1ie5_A
Length = 291
Score = 148 bits (374), Expect = 2e-39
Identities = 56/299 (18%), Positives = 90/299 (30%), Gaps = 36/299 (12%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPR-PRVMWLINGHTIVNEIVRKITATETTEME 1620
P ++ GE F C +V G + + W ++ ++I+ +
Sbjct: 3 LQVDIVPSQGEISVGESKFFLC-QVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDS 61
Query: 1621 HKGKIQE-RVVDA--------------SEKPAK-----PPVFTKKIQPCRAFEQDQARFE 1660
I + DA SE +F P E + A
Sbjct: 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIV 121
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+ PTI W + + D + S + I R + D G +
Sbjct: 122 CDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI-RGIKKTDEGTYRCEGRILARG 180
Query: 1721 AKCSANLVVEEKRQGGRGGVVPPSFLTT--ISSAVINVGQLARFDAKISATKPLDVYWLK 1778
++ V VPP+ I +A N+GQ + W K
Sbjct: 181 EINFKDIQVIVN--------VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTK 232
Query: 1779 NGKKIIPDIRY--KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+G+ I + K + D+ L I D Y C+A N AGE L V +K
Sbjct: 233 DGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 125 bits (316), Expect = 1e-31
Identities = 59/305 (19%), Positives = 91/305 (29%), Gaps = 51/305 (16%)
Query: 321 SEGEIAHFEASLIPVGDQTMTVE-FLYNGKPIEAS-HRIRTVHAFGMV-VLEILGTKIED 377
S GE F + + + F NG+ + + RI V L I I+D
Sbjct: 15 SVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDD 73
Query: 378 TGVYTCRATNKWG-----QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECT 432
G+Y C T + G + + Q F + E K+G+ A C
Sbjct: 74 AGIYKCVVTAEDGTQSEATVNVKIF---------QKLMFKNAPTPQE-FKEGEDAVIVCD 123
Query: 433 LTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-- 490
+ + + W H G+ + K V+ + + I ++ D G Y C
Sbjct: 124 VV--SSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ-IRGIKKTDEGTYRCEGRILARG 180
Query: 491 ----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 540
+ +PP S N V C + P + W
Sbjct: 181 EINFKDIQVIVNVPPTVQA--------RQSIVNATANLGQSVTLVCDAD--GFPEPTMSW 230
Query: 541 FFNGRPFATGSRVKTVYDFGFI--SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKV 598
+G P + F L + V D EY+C A NK G
Sbjct: 231 TKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIH----- 285
Query: 599 LTVIV 603
L V
Sbjct: 286 LKVFA 290
Score = 124 bits (314), Expect = 2e-31
Identities = 40/253 (15%), Positives = 73/253 (28%), Gaps = 35/253 (13%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPL-PTIKWFREDFPITSSPDFQI---HTFST 1693
+ + F + GD I WF + S +I
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
S L + ++D+G++ + G + N+ + + F +
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQ----------KLMFKNAPTPQ 110
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKIIP--DIRYKTLEEDNLFTLLIIEAVVEDS 1810
G+ A + ++ P + W G+ +I D+R+ L + L I D
Sbjct: 111 EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQ---IRGIKKTDE 167
Query: 1811 GAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGS 1870
G Y C A ++ V P + + + G
Sbjct: 168 GTYRCEGRILARGEINFKDIQVIVNVPP---------------TVQARQSIVNATANLGQ 212
Query: 1871 AVTLKCRITGKPR 1883
+VTL C G P
Sbjct: 213 SVTLVCDADGFPE 225
Score = 114 bits (286), Expect = 1e-27
Identities = 57/337 (16%), Positives = 102/337 (30%), Gaps = 73/337 (21%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWF-LNGKPL-PHKNRFNPIYD 1479
+ + I + + +S F CQ + + WF NG+ L P++ R + +++
Sbjct: 1 RVLQV--DIVPSQGEISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWN 57
Query: 1480 FGYV-AMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKSIE 1537
+ +D+G Y C T G +K
Sbjct: 58 DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI-------------------- 97
Query: 1538 KIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMW 1596
+ +F + P Q+ +EGE A C V P ++W
Sbjct: 98 ----------------------FQKLMFKNAPTPQEFKEGEDAVIVC-DVVSSLPPTIIW 134
Query: 1597 LINGHTIVNEIVRKITATETT-------EMEHKGK---IQERVVDASEKPAK-------P 1639
G ++ + + + +G + P
Sbjct: 135 KHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVP 194
Query: 1640 PVFTKKIQPCR--AFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST--KS 1695
P + A + DG P PT+ W ++ PI + + + S
Sbjct: 195 PTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 254
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L +R V D + IAEN+ G+ S +L V K
Sbjct: 255 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 108 bits (271), Expect = 1e-25
Identities = 48/300 (16%), Positives = 81/300 (27%), Gaps = 61/300 (20%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPI-FHKNRVKMVSDF 464
+ + E + G+S F C + + + WF NG+ + ++ R+ +V +
Sbjct: 1 RVLQVDIVPSQGE-ISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWND 58
Query: 465 GFV-VMDIAYVQSHDSGEYVCRAWNNF---------IFIPPFPIFIFHQIRLPSPSQDNL 514
+ I D+G Y C + I +F +P+
Sbjct: 59 DDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFK------NAPT--PQ 110
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK-TVYDFGFISLDMDYVYARD 573
+ E C S I W GR V+ V L + + D
Sbjct: 111 EFKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN--YLQIRGIKKTD 166
Query: 574 SGEYICRATNKWGTAMTKAKVICKVL--------------TV------------------ 601
G Y C + + V T
Sbjct: 167 EGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEP 226
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVI--LDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W +G+ + + H F L I + + Y C A NK G L
Sbjct: 227 TMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHL 286
Score = 101 bits (252), Expect = 3e-23
Identities = 51/261 (19%), Positives = 82/261 (31%), Gaps = 25/261 (9%)
Query: 236 VPFTEWF-VNNKPLPAG-AKFKTTHDFGYV-ALDIVGAYAEDSGIYTVKATNSKGSATTS 292
WF N + L + + L I A +D+GIY T G+ +
Sbjct: 32 DKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQ-SE 90
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKP 350
T+ + + +F EGE A T+ + + G+
Sbjct: 91 ATV----NVKI-FQKLMFKNAPTPQE-FKEGEDAVIVCDVV----SSLPPTIIWKHKGRD 140
Query: 351 IEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPK 410
+ +R L+I G K D G Y C +++ + PP
Sbjct: 141 VILKKDVR-FIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNV---PPT 196
Query: 411 FTSHIKSLE-GLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 469
+ + G S C PE + W +G+PI ++ F
Sbjct: 197 VQARQSIVNATANLGQSVTLVCDAD--GFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 254
Query: 470 D--IAYVQSHDSGEYVCRAWN 488
+ I V +D EYVC A N
Sbjct: 255 ELTIRNVDKNDEAEYVCIAEN 275
Score = 97.6 bits (243), Expect = 5e-22
Identities = 41/239 (17%), Positives = 62/239 (25%), Gaps = 52/239 (21%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDFGF 973
F PT E A C + T+ W H G+ + R +++
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY- 156
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L+I + D G Y C+ + V V+
Sbjct: 157 --LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV----------IVNV----------- 193
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQ-DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF 1092
PP ++ N V C + P + W
Sbjct: 194 -------------------PPTVQARQSIVNATANLGQSVTLVCDAD--GFPEPTMSWTK 232
Query: 1093 NGRPFATGSRVKTVYDFGFI--SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
+G P + F L + V D EY+C A NK G + AK
Sbjct: 233 DGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 97.3 bits (242), Expect = 6e-22
Identities = 51/337 (15%), Positives = 95/337 (28%), Gaps = 85/337 (25%)
Query: 505 RLPSPSQD--NLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGRPFATG-SRVKTVYDFG 560
R+ ++ F C++ I WF NG + R+ V++
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD 59
Query: 561 FI-SLDMDYVYARDSGEYICRATNKWGTAMTK--------------------------AK 593
+L + D+G Y C T + GT A
Sbjct: 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAV 119
Query: 594 VICKVL---TVIVEWFYNGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
++C V+ + W + G+ + R+ + + I I + + G Y C
Sbjct: 120 IVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK---KTDEGTYRCEGRI 176
Query: 649 KYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPV 708
++ ++ +I+ P
Sbjct: 177 LARGEINFKDIQ------VIVNV----------------------------------PPT 196
Query: 709 FTVPLSNID-DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF--RTFCDFGFV 765
S ++ G++ P+ + W +G+P++ +
Sbjct: 197 VQARQSIVNATANLGQSVTLVCD--ADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSS 254
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L I V D +Y C A N GE S +KV K
Sbjct: 255 ELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 96.9 bits (241), Expect = 8e-22
Identities = 58/319 (18%), Positives = 86/319 (26%), Gaps = 83/319 (26%)
Query: 7 PNLKIEWFK-NGVPLSLG-SRIRSTFDFGLV-TLSINSLRADDSAIYTCKATNLLGEAVS 63
+ I WF NG LS RI ++ TL+I + DD+ IY C T G
Sbjct: 31 KDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSE 90
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
T+ ++ +F +F + E KE
Sbjct: 91 -ATVNVK----------------------------------IFQKLMFKNAPTPQEFKEG 115
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
E+ C V + W H G+ + K V+ +
Sbjct: 116 EDAVIVCDVV---------S----------SLPPTIIWKHKGRDVILKKDVRFIVLSNNY 156
Query: 184 VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVA---------LDIELMLKT 234
+ I ++ D G Y C FK V ++ L
Sbjct: 157 LQ-IRGIKKTDEGTYRC--EGRI-LARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQ 212
Query: 235 LV-----------PFTEWFVNNKPLPAGAKFKTTHDF--GYVALDIVGAYAEDSGIYTVK 281
V P W + +P+ + H F L I D Y
Sbjct: 213 SVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCI 272
Query: 282 ATNSKGSATTSGTLKCLER 300
A N G S LK +
Sbjct: 273 AENKAGEQDASIHLKVFAK 291
Score = 92.2 bits (229), Expect = 3e-20
Identities = 34/235 (14%), Positives = 63/235 (26%), Gaps = 53/235 (22%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGSRIKTI--NDF 971
+ + P+ ++ F C+ + + WF NG+ LS + ++ ND
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD 59
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVKGRQGIDVEPQVSAIFANATKN 1030
L I + + D+G+Y C T + G + + + +
Sbjct: 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI---------------------- 97
Query: 1031 IQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 1090
+F + + E C S I W
Sbjct: 98 --------------------FQKLMFKNAPTP-QEFKEGEDAVIVCD--VVSSLPPTIIW 134
Query: 1091 FFNGRPFATGSRVK-TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
GR V+ V L + + D G Y C + +
Sbjct: 135 KHKGRDVILKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDI 187
Score = 89.9 bits (223), Expect = 2e-19
Identities = 51/318 (16%), Positives = 93/318 (29%), Gaps = 60/318 (18%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH-NGKP 167
+ E E+ F C+V + + + WF NG+
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQV------------------AGDAKDKDISWFSPNGEK 44
Query: 168 I-FHKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFG-YV 224
+ ++ R+ +V + + I D+G Y C V G + + T + +
Sbjct: 45 LSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV--VTA---EDGTQSEATVNVKIFQ 99
Query: 225 ALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALD 266
L + P W + + + L
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-LQ 158
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLS-NLSEGEI 325
I G D G Y + ++ + V + P + ++ + G+
Sbjct: 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQ----VIV-NVPPTVQARQSIVNATANLGQS 213
Query: 326 AHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMV--VLEILGTKIEDTGVY 381
A G T+ + +G+PIE H F L I D Y
Sbjct: 214 VTLVCDAD----GFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEY 269
Query: 382 TCRATNKWGQAEISVNLE 399
C A NK G+ + S++L+
Sbjct: 270 VCIAENKAGEQDASIHLK 287
Score = 89.6 bits (222), Expect = 3e-19
Identities = 48/302 (15%), Positives = 81/302 (26%), Gaps = 92/302 (30%)
Query: 603 VEWF-YNGKKL-PHGHRYRTFHDFGIV-ILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ WF NG+KL P+ R + L I +++G+Y+C T + G+
Sbjct: 35 ISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGT------- 87
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
+ T +++ Q +F + +
Sbjct: 88 ----------------------------------QSEATVNVKIFQKLMFKNAPTPQE-F 112
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
+EGE+A + W G+ + R L+I + D G
Sbjct: 113 KEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-LQIRGIKKTDEGT 169
Query: 780 YSCRAYNDYGEAVTSASMKVQGK-------------------RSIILE------------ 808
Y C + ++V +S+ L
Sbjct: 170 YRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMS 229
Query: 809 -----SQLPKGMEVFISFHE--------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ E I V D +Y C A N GE S +KV
Sbjct: 230 WTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVF 289
Query: 856 GK 857
K
Sbjct: 290 AK 291
Score = 85.7 bits (212), Expect = 6e-18
Identities = 37/232 (15%), Positives = 61/232 (26%), Gaps = 48/232 (20%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
I +D G Y C + G + ++K+ K P E + A +
Sbjct: 65 TIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNA---PTPQEFKEGEDAVIV 121
Query: 882 --GYGH-------EREDRTIDKIAELEGYGHERED-RI----EEDLGK------------ 915
+ + R + ++ +I + D G
Sbjct: 122 CDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGE 181
Query: 916 ------------APEFLTTPT--DLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
P + + T C P T+ W +G+ +
Sbjct: 182 INFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCD--ADGFPEPTMSWTKDGEPIEN 239
Query: 962 GSRIKTINDFGFVI--LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
+ F L I +V D Y C A NK GE S L V +
Sbjct: 240 EEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 291
Score = 77.6 bits (191), Expect = 3e-15
Identities = 33/267 (12%), Positives = 55/267 (20%), Gaps = 91/267 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L I +D G Y C + G T+ ++ +
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEA---------TVNVK--IF------------- 98
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMK 1458
Q F Q E + C V
Sbjct: 99 -----------------------QKLMFK--NAPTPQEFKEGEDAVIVCD--VVSSLPPT 131
Query: 1459 VEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTT 1518
+ W G+ + K I + + D G Y C L + +
Sbjct: 132 IIWKHKGRDVILKKDVRFIVLSNNY-LQIRGIKKTDEGTYRCEGRILARGEINFKDI--- 187
Query: 1519 GKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGE 1578
Q++ + P G+
Sbjct: 188 ---------------------------------QVIVNVPP--TVQARQSIVNATANLGQ 212
Query: 1579 PARFCTRVTGYPRPRVMWLINGHTIVN 1605
G+P P + W +G I N
Sbjct: 213 SVTLVCDADGFPEPTMSWTKDGEPIEN 239
Score = 74.5 bits (183), Expect = 3e-14
Identities = 29/202 (14%), Positives = 55/202 (27%), Gaps = 54/202 (26%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ + I W G + L +R L I ++ D Y C+ L
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN-YLQIRGIKKTDEGTYRCEGRILARGE 181
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
++ +++ P ++ + +
Sbjct: 182 INFKDIQVIVN-----------VPPTVQARQSIV---------------------NATAN 209
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
++V C + G PE + W +G+PI ++ F
Sbjct: 210 LGQSVTLVCDAD---------G----------FPEPTMSWTKDGEPIENEEEDDEKHIFS 250
Query: 182 FVVMD--IAYVQSHDSGEYVCQ 201
+ I V +D EYVC
Sbjct: 251 DDSSELTIRNVDKNDEAEYVCI 272
Score = 69.5 bits (170), Expect = 1e-12
Identities = 39/264 (14%), Positives = 61/264 (23%), Gaps = 77/264 (29%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINISTAFLI 1319
+ F +E E V + P + FI +S
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN--- 155
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
L I + D+G Y C I
Sbjct: 156 --------------------YLQIRGIKKTDEGTYRCEGRILARGEINFKDI-------- 187
Query: 1380 QLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVE 1439
Q+ VP P + +
Sbjct: 188 QVIVNVP--------------------------------------PTVQARQSIVNATAN 209
Query: 1440 M-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAM--NFGWVYPEDSG 1496
+ QS C G P + W +G+P+ ++ + + F + V D
Sbjct: 210 LGQSVTLVCD--ADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEA 267
Query: 1497 EYLCRATNLYGMDETRAILKTTGK 1520
EY+C A N G + LK K
Sbjct: 268 EYVCIAENKAGEQDASIHLKVFAK 291
Score = 64.5 bits (157), Expect = 6e-11
Identities = 26/192 (13%), Positives = 48/192 (25%), Gaps = 43/192 (22%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWF-WNGKPMKTG-SRFRTFCDF 762
+ + S + + GE+ F + D + WF NG+ + R +
Sbjct: 1 RVLQVDIVPSQGE-ISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWND 58
Query: 763 GFV-ILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ---------- 810
L I +D G Y C + G + ++K+ K
Sbjct: 59 DDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDA 118
Query: 811 ----------------------LPKGMEVFISFHE-----ISPVYPEDCGQYSCRAYNDY 843
+ +V I + D G Y C
Sbjct: 119 VIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILA 178
Query: 844 GEAVTSASMKVQ 855
+ ++V
Sbjct: 179 RGEINFKDIQVI 190
Score = 57.6 bits (139), Expect = 1e-08
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDSAIYTCKATNLLGEAV 62
P + W K+G P+ F L+I ++ +D A Y C A N GE
Sbjct: 222 GFPEPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQD 281
Query: 63 STCTLKIEDR 72
++ LK+ +
Sbjct: 282 ASIHLKVFAK 291
Score = 40.2 bits (94), Expect = 0.004
Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 6/108 (5%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGRPFATG-SRVKTVYDFGF 1111
++ F C++ I WF NG + R+ V++
Sbjct: 3 LQVDIVPS-QGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 1112 I-SLDMDYVYARDSGEYICRATNKWGTA-MTKAKVICKAKHDIVTESQ 1157
+L + D+G Y C T + GT V K
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPT 108
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A
{Homo sapiens}
Length = 207
Score = 144 bits (364), Expect = 5e-39
Identities = 41/208 (19%), Positives = 82/208 (39%), Gaps = 16/208 (7%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI-- 1696
FTK E+ Q RF ++ + + + I P +++H I
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 62
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE---------EKRQGGRGGVVPPSFLT 1747
+ M ++ ED G + ++ + LV + E ++ P F+
Sbjct: 63 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122
Query: 1748 TISSAVINVGQLARFDAKISATKP-LDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAV 1806
+S V K++ K + W K+ ++I D ++ +D + TLLI E
Sbjct: 123 YLSWEVT-GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFS 179
Query: 1807 VEDSGAYECVAMNNAGEARCEAELVVQS 1834
+D+G YE + ++ G+ + +LV ++
Sbjct: 180 KKDAGIYEVILKDDRGKDKSRLKLVDEA 207
Score = 135 bits (341), Expect = 6e-36
Identities = 32/234 (13%), Positives = 75/234 (32%), Gaps = 31/234 (13%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS--RIKTINDFGFV 974
F + + + E F + + + V + N K + G ++ + G +
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLS-GNAKVNYIFNEKEIFEGPKYKMHIDRNTGII 61
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
+ + + D G YT + + ++ L + + E +
Sbjct: 62 EMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQR------------ 109
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
+ + P F L + +V V C++ T I W+ +
Sbjct: 110 -----------QEWIRKQGPHFVEYL--SWEVTGECNVLLKCKVANIKKET-HIVWYKDE 155
Query: 1095 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKA 1148
R + + + G +L + +D+G Y + G ++ K++ +A
Sbjct: 156 REISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 207
Score = 112 bits (282), Expect = 4e-28
Identities = 29/216 (13%), Positives = 71/216 (32%), Gaps = 34/216 (15%)
Query: 592 AKVICKVLTV----IVEWFYNGKKLPHGHRYRTFHD--FGIVILDILYCYEENSGVYECR 645
+ + + V + +N K++ G +Y+ D GI+ + + +E+ G Y +
Sbjct: 20 VRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79
Query: 646 ATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQ 705
+ ++ + L L E++ + +Q
Sbjct: 80 LQDGKATNHSTVVLVGDVFKKLQKEAEFQR-----------------------QEWIRKQ 116
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P F LS ++ N + ++ + + W+ + + + + G
Sbjct: 117 GPHFVEYLSW--EVTGECNVLLKCKVANIK-KETHIVWYKDEREISVDEKHDF--KDGIC 171
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L I+ +D G Y +D G+ + + +
Sbjct: 172 TLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEA 207
Score = 108 bits (270), Expect = 2e-26
Identities = 21/187 (11%), Positives = 54/187 (28%), Gaps = 44/187 (23%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
+ + ED G Y+ + + ++ + + + E++
Sbjct: 65 MEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQ---------------- 108
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
R E + P F + +C++
Sbjct: 109 ------------------------RQEWIRKQGPHF-VEYLSWEVTGECNVLLKCKVANI 143
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ + W+ + + +S + + G L I + +D+G+Y + G+ +
Sbjct: 144 KKET-HIVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSR 200
Query: 1004 CKLTVKG 1010
KL +
Sbjct: 201 LKLVDEA 207
Score = 107 bits (269), Expect = 2e-26
Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 40/200 (20%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFD--FGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ N K+ + N + G + + D G++ + + L+ +D YT + +
Sbjct: 28 KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATN 87
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
ST L + + L+K E ++ E P F+ +L E
Sbjct: 88 HSTVVLVGDV----------------FKKLQKEAEFQRQEWI-RKQGPHFVEYL-SWEVT 129
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
NV C+V K E + W+ + + I + G
Sbjct: 130 GECNVLLKCKVANIK------------------KETHIVWYKDEREISVDEKHDFKD--G 169
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
+ I D+G Y
Sbjct: 170 ICTLLITEFSKKDAGIYEVI 189
Score = 103 bits (259), Expect = 5e-25
Identities = 32/207 (15%), Positives = 69/207 (33%), Gaps = 25/207 (12%)
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKM--VSDFGF 466
FT ++E + + F ++ KV + N K IF + KM + G
Sbjct: 3 DPFTKSELAVE-ILEKGQVRFWMQAEKLS-GNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 60
Query: 467 VVMDIAYVQSHDSGEYVCRAWN---------NFIFIPPFPIFIFHQIRLPSPSQD----- 512
+ M + +Q D G Y + + + + + + +
Sbjct: 61 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 120
Query: 513 ----NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
+ +V V C++ T I W+ + R + + + G +L +
Sbjct: 121 VEYLSWEVTGECNVLLKCKVANIKKET-HIVWYKDEREISVDEKHD--FKDGICTLLITE 177
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVI 595
+D+G Y + G ++ K++
Sbjct: 178 FSKKDAGIYEVILKDDRGKDKSRLKLV 204
Score = 103 bits (259), Expect = 5e-25
Identities = 25/185 (13%), Positives = 58/185 (31%), Gaps = 22/185 (11%)
Query: 322 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGMVVLEILGTKIEDTG 379
E F V +++N K I +++ G++ + + + ED G
Sbjct: 16 EKGQVRFWMQAEK-LSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEG 74
Query: 380 VYTCRATNKWGQAEISVN--------------LECVDKSKGQPPKFTSHIKSLEGLKDGD 425
YT + + +V + + + Q P F ++ +
Sbjct: 75 TYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWE--VTGEC 132
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCR 485
+ +C + + E + W+ + + I + G + I D+G Y
Sbjct: 133 NVLLKCKVANIK-KETHIVWYKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVI 189
Query: 486 AWNNF 490
++
Sbjct: 190 LKDDR 194
Score = 103 bits (259), Expect = 6e-25
Identities = 27/143 (18%), Positives = 44/143 (30%), Gaps = 4/143 (2%)
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKP-LDVYWLKNGKKIIPDIRYK--TLEEDNLFT 1799
F + + I RF + V ++ N K+I +YK +
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 62
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAE 1859
+ + + ED G Y + LV K K+A + + P E
Sbjct: 63 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122
Query: 1860 PLKDQNVKEGSAVTLKCRITGKP 1882
L V V LKC++
Sbjct: 123 YL-SWEVTGECNVLLKCKVANIK 144
Score = 99.2 bits (247), Expect = 2e-23
Identities = 33/207 (15%), Positives = 60/207 (28%), Gaps = 42/207 (20%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT---- 1617
F A ++ E RF +V ++ N I K+ T
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIE 62
Query: 1618 ------EMEHKGK--------------IQERVVDASEKPAK-------------PPVFTK 1644
+ E +G V D +K K P F +
Sbjct: 63 MFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE 122
Query: 1645 KIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 1703
+ + + T I W++++ I+ L++ +
Sbjct: 123 Y-LSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKD--GICTLLITEFS 179
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVE 1730
+D+G++ VI ++ GK K LV E
Sbjct: 180 KKDAGIYEVILKDDRGKDKSRLKLVDE 206
Score = 96.5 bits (240), Expect = 2e-22
Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 52/196 (26%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD--FGFISLDMDYVY 570
+++ E G+V F + E K ++++ FN + G + K D G I + M+ +
Sbjct: 11 AVEILEKGQVRFWMQAE-KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQ 69
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI----------------------------------- 595
D G Y + + T + ++
Sbjct: 70 DEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVT 129
Query: 596 --------CKVLTV----IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYE 643
CKV + + W+ + +++ ++ GI L I ++++G+YE
Sbjct: 130 GECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDF--KDGICTLLITEFSKKDAGIYE 187
Query: 644 CRATNKYGSDVTKASL 659
+ G D ++ L
Sbjct: 188 VILKDDRGKDKSRLKL 203
Score = 93.1 bits (231), Expect = 2e-21
Identities = 25/174 (14%), Positives = 59/174 (33%), Gaps = 15/174 (8%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHD--FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
+ N K + G K+K D G + + + ED G YT + + K + ++
Sbjct: 33 AKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVV 92
Query: 295 LKCLERLFVNHNYPLFSLQF---------QHLSN-LSEGEIAHFEASLIPVGDQTMTVEF 344
L + ++ ++LS ++ + + + + + +
Sbjct: 93 LVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANI-KKETHIVW 151
Query: 345 LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
+ + I + G+ L I +D G+Y + G+ + + L
Sbjct: 152 YKDEREISVDEKHDFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203
Score = 93.1 bits (231), Expect = 3e-21
Identities = 38/221 (17%), Positives = 60/221 (27%), Gaps = 54/221 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F VE E V F + E KV + N K I
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAEKL------------------SGNAKVNYIFNEKEI 44
Query: 169 FHKNRVKM--VSDFGFVVMDIAYVQSHDSGEYVCQ-------------WFVNNKPLPAGA 213
F + KM + G + M + +Q D G Y Q +
Sbjct: 45 FEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKE 104
Query: 214 KFKTTHDF-------------GYVALDIELMLKTLV------PFTEWFVNNKPLPAGAKF 254
++ V + ++LK V W+ + + + K
Sbjct: 105 AEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKH 164
Query: 255 KTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
G L I +D+GIY V + +G + L
Sbjct: 165 DFKD--GICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203
Score = 89.6 bits (222), Expect = 4e-20
Identities = 32/254 (12%), Positives = 78/254 (30%), Gaps = 56/254 (22%)
Query: 1265 PRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFF---PFINISTAFLIFN 1321
F +V + E VRF + E ++ +V + F
Sbjct: 3 DPFTKSELAVEILEKGQVRFWMQAE-KLSGNAKVN------YIFNEKEIFEGPK------ 49
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQL 1381
+ + + G + + ++ + ED+G Y + + + + +Q
Sbjct: 50 ---YKMHIDR---NTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQK 103
Query: 1382 QNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQ 1441
+ + + E +KQ P FV ++
Sbjct: 104 EAEFQRQ-----------------------------EWIRKQGPHFVE--YLSWEVTGEC 132
Query: 1442 STKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCR 1501
+ +C++A + + W+ + + + + + + G + +D+G Y
Sbjct: 133 NVLLKCKVANI-KKETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVI 189
Query: 1502 ATNLYGMDETRAIL 1515
+ G D++R L
Sbjct: 190 LKDDRGKDKSRLKL 203
Score = 87.7 bits (217), Expect = 2e-19
Identities = 25/207 (12%), Positives = 59/207 (28%), Gaps = 59/207 (28%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCD--FGF 764
FT ++ + E F + KV + +N K + G +++ D G
Sbjct: 3 DPFTKSELAVE-ILEKGQVRFWMQAEKLS-GNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 60
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEV------F 818
+ + + + ED G Y+ + + ++ + + + E++ + + F
Sbjct: 61 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHF 120
Query: 819 ISF--------------------------------HEISP-----------------VYP 829
+ + EIS
Sbjct: 121 VEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSK 180
Query: 830 EDCGQYSCRAYNDYGEAVTSASMKVQG 856
+D G Y +D G+ + + +
Sbjct: 181 KDAGIYEVILKDDRGKDKSRLKLVDEA 207
Score = 83.4 bits (206), Expect = 6e-18
Identities = 26/180 (14%), Positives = 58/180 (32%), Gaps = 28/180 (15%)
Query: 1436 QLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPH--KNRFNPIYDFGYVAMNFGWVYPE 1493
+++E +F Q A N KV + N K + K + + + G + M + E
Sbjct: 13 EILEKGQVRFWMQ-AEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDE 71
Query: 1494 DSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQL 1553
D G Y + + + + ++ + ++ Q E
Sbjct: 72 DEGTYTFQLQDGKATNHS-----------------------TVVLVGDVFKKLQKEAEFQ 108
Query: 1554 VEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP-RVMWLINGHTIVNEIVRKIT 1612
++ K+ P FV + + +V +V + ++W + I +
Sbjct: 109 RQEWIRKQGPHFV-EYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK 167
Score = 72.7 bits (178), Expect = 3e-14
Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD--FGF 1111
FT +++ E G+V F + E K ++++ FN + G + K D G
Sbjct: 3 DPFTKSELA-VEILEKGQVRFWMQAE-KLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGI 60
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEK 1166
I + M+ + D G Y + + T + ++ + E++ K
Sbjct: 61 IEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRK 115
Score = 67.3 bits (164), Expect = 2e-12
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
I W+K+ +S+ + F G+ TL I D+ IY + G+ S
Sbjct: 145 KETHIVWYKDEREISVDEKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 202
Query: 67 LKIE 70
L E
Sbjct: 203 LVDE 206
Score = 51.1 bits (122), Expect = 6e-07
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 21/121 (17%)
Query: 1252 PEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFI 1311
E ++ I ++ P F E S V V + +V + + ++
Sbjct: 105 AEFQRQEWIRKQGPHF-VEYLSWEVTGECNVLLKCKVAN-IKKETHIV------WYKDER 156
Query: 1312 NISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
IS F G +L I +D G Y +D G+ ++ +
Sbjct: 157 EISVD-------------EKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKL 203
Query: 1372 S 1372
Sbjct: 204 V 204
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, IG, membrane, homphilic,
glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB:
2xy2_A* 2vaj_A
Length = 189
Score = 140 bits (354), Expect = 6e-38
Identities = 34/197 (17%), Positives = 70/197 (35%), Gaps = 16/197 (8%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
T + + F G+P + + I S+ + +S L
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVG 1757
+ +ED+G++ A + G+ + + L + + +F +S G
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQ----------KLTFREVVSPQEFKQG 111
Query: 1758 QLARFDAKISATKPLDVYWLKNGKKI--IPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
+ A ++S++ V WL + +++ I D R+ L + L I+ D G Y C
Sbjct: 112 EDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---NLQILNINKSDEGIYRC 168
Query: 1816 VAMNNAGEARCEAELVV 1832
A +++V
Sbjct: 169 EGRVEARGEIDFRDIIV 185
Score = 115 bits (289), Expect = 3e-29
Identities = 31/231 (13%), Positives = 65/231 (28%), Gaps = 49/231 (21%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+ + + + L+ F C +P + G+ + + R+ +
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 59
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
L I + + D+G+Y C+AT+ G+ A I +
Sbjct: 60 LTIYNANIEDAGIYRCQATDAKGQTQE----------------------ATVVLEIYQ-- 95
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
F + + + CR S P + W ++
Sbjct: 96 -----------------KLTFREVVSP-QEFKQGEDAEVVCR--VSSSPAPAVSWLYHNE 135
Query: 1096 PFATGSRVK-TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
T S + + +L + + D G Y C + + +I
Sbjct: 136 EVTTISDNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDII 184
Score = 108 bits (271), Expect = 8e-27
Identities = 39/184 (21%), Positives = 66/184 (35%), Gaps = 15/184 (8%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
++ + LS GE F +G+ + G+ I ++ R+
Sbjct: 3 LQVTISLSKVE-LSVGESKFFTC--TAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSR 59
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L I IED G+Y C+AT+ GQ + + V Q F + E K G+ A
Sbjct: 60 LTIYNANIEDAGIYRCQATDAKGQTQEA----TVVLEIYQKLTFREVVSPQE-FKQGEDA 114
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKN--RVKMVSDFGFVVMDIAYVQSHDSGEYVCR 485
C + P V W ++ + + + R M+++ I + D G Y C
Sbjct: 115 EVVC--RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ---ILNINKSDEGIYRCE 169
Query: 486 AWNN 489
Sbjct: 170 GRVE 173
Score = 106 bits (265), Expect = 6e-26
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 20/143 (13%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
++S ++VG+ F ++ G+KII R +E L
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 1802 IIEAVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEP 1860
I A +ED+G Y C A + G+ + L + + T E
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------------QKLTFREV 102
Query: 1861 LKDQNVKEGSAVTLKCRITGKPR 1883
+ Q K+G + CR++ P
Sbjct: 103 VSPQEFKQGEDAEVVCRVSSSPA 125
Score = 101 bits (252), Expect = 3e-24
Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 22/188 (11%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET----- 1616
++ GE F G P + G I++ +
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLT 61
Query: 1617 ---TEMEH-----------KGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVE 1662
+E KG+ QE V + F + + P + + A
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEI--YQKLTFREVVSPQEFKQGEDAEVVCR 119
Query: 1663 FDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 1722
P P + W + +T+ D + + ++ I + D G++
Sbjct: 120 VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQI-LNINKSDEGIYRCEGRVEARGEI 178
Query: 1723 CSANLVVE 1730
+++V
Sbjct: 179 DFRDIIVI 186
Score = 98.3 bits (245), Expect = 2e-23
Identities = 38/208 (18%), Positives = 68/208 (32%), Gaps = 34/208 (16%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
+ T + +E L G+S F CT + +PE + G+ I RV + +
Sbjct: 2 LLQVTISLSKVE-LSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS 58
Query: 468 VMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNLDV 516
+ I D+G Y C+A + I+ F + S +
Sbjct: 59 RLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKL----TF--REVVS----PQEF 108
Query: 517 PEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK-TVYDFGFISLDMDYVYARDSG 575
+ CR S P + W ++ T S + + +L + + D G
Sbjct: 109 KQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINKSDEG 164
Query: 576 EYICRATNKWGTAMTKAKVICKVLTVIV 603
Y C + + + + VIV
Sbjct: 165 IYRCEGRVEARGE-----IDFRDIIVIV 187
Score = 96.0 bits (239), Expect = 2e-22
Identities = 28/193 (14%), Positives = 53/193 (27%), Gaps = 46/193 (23%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ I + + +S F C +G+P + G+ + R +
Sbjct: 2 LLQVT--ISLSKVELSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVR 57
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+ ED+G Y C+AT+ G + ++
Sbjct: 58 SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI------------------------ 93
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
+ F Q+ ++GE A RV+ P P V WL +
Sbjct: 94 -----------------YQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEE 136
Query: 1603 IVNEIVRKITATE 1615
+ +
Sbjct: 137 VTTISDNRFAMLA 149
Score = 95.6 bits (238), Expect = 3e-22
Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 55/203 (27%)
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
I + G+K+ R + L I E++G+Y C+AT+ G
Sbjct: 33 IDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA----- 87
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
T +E Q F +S + ++
Sbjct: 88 ------------------------------------TVVLEIYQKLTFREVVSPQE-FKQ 110
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-----LEISPVYPED 776
GE+A R + P V W ++ + + T S R F + L+I + D
Sbjct: 111 GEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNR------FAMLANNNLQILNINKSD 162
Query: 777 CGQYSCRAYNDYGEAVTSASMKV 799
G Y C + + + V
Sbjct: 163 EGIYRCEGRVEARGEIDFRDIIV 185
Score = 93.3 bits (232), Expect = 2e-21
Identities = 28/192 (14%), Positives = 55/192 (28%), Gaps = 59/192 (30%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIE 70
+ G + R+ + L+I + +D+ IY C+AT+ G+ +
Sbjct: 34 DWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE- 92
Query: 71 DRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDC 130
++ F ++ E K+ E+ C
Sbjct: 93 ----------------------------------IYQKLTFREVVSPQEFKQGEDAEVVC 118
Query: 131 RVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN--RVKMVSDFGFVVMDIA 188
RV P V W ++ + + + R M+++ I
Sbjct: 119 RVS---------S----------SPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ---IL 156
Query: 189 YVQSHDSGEYVC 200
+ D G Y C
Sbjct: 157 NINKSDEGIYRC 168
Score = 84.4 bits (209), Expect = 2e-18
Identities = 26/187 (13%), Positives = 53/187 (28%), Gaps = 41/187 (21%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
T+ LS ++ L GE+ F +P+ + G+ + + R +
Sbjct: 2 LLQVTISLSKVE-LSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRS 58
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGK---------------RSIILE- 808
L I ED G Y C+A + G+ + +++ K +
Sbjct: 59 RLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVC 118
Query: 809 ----------------SQLPKGMEVFISFHE-----ISPVYPEDCGQYSCRAYNDYGEAV 847
++ + + I + D G Y C + +
Sbjct: 119 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEI 178
Query: 848 TSASMKV 854
+ V
Sbjct: 179 DFRDIIV 185
Score = 84.1 bits (208), Expect = 2e-18
Identities = 29/164 (17%), Positives = 54/164 (32%), Gaps = 14/164 (8%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSA-TTSGTL 295
+ + + + + + L I A ED+GIY +AT++KG + L
Sbjct: 32 SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVL 91
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
+ ++ F +GE A V +LY+ + +
Sbjct: 92 EIYQK-------LTFREVVSPQE-FKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTIS 141
Query: 356 RIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
R + A L+IL D G+Y C + ++
Sbjct: 142 DNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARGEIDFRDI 183
Score = 82.1 bits (203), Expect = 1e-17
Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 36/178 (20%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+++ F C +P + G + RV + L +
Sbjct: 11 KVELSVGESKFFTCT--AIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIE 68
Query: 573 DSGEYICRATNKWGTAMTK--------------------------AKVICKVL---TVIV 603
D+G Y C+AT+ G A+V+C+V V
Sbjct: 69 DAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAV 128
Query: 604 EWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
W Y+ +++ +R+ + + IL+I + + G+Y C + ++ +
Sbjct: 129 SWLYHNEEVTTISDNRFAMLANNNLQILNI---NKSDEGIYRCEGRVEARGEIDFRDI 183
Score = 75.6 bits (186), Expect = 2e-15
Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 7/95 (7%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDFGF 973
F + + A CR ++ P+ V W ++ + + + +R + +
Sbjct: 96 KLTFREVVSPQEFKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN- 152
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
L+I ++ D G+Y C+ + + V
Sbjct: 153 --LQILNINKSDEGIYRCEGRVEARGEIDFRDIIV 185
Score = 74.4 bits (183), Expect = 5e-15
Identities = 32/206 (15%), Positives = 53/206 (25%), Gaps = 44/206 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
L+ VE E+ F C G +PE + G+ I
Sbjct: 3 LQVTISLSKVELSVGESKFFTCTAI---------G----------EPESIDWYNPQGEKI 43
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFG-YVALD 227
RV + + + I D+G Y CQ + G + T Y L
Sbjct: 44 ISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQ--ATDA---KGQTQEATVVLEIYQKLT 98
Query: 228 IELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
++ P W +N+ + + + L I+
Sbjct: 99 FREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN-NLQILN 157
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTL 295
D GIY + +
Sbjct: 158 INKSDEGIYRCEGRVEARGEIDFRDI 183
Score = 67.5 bits (165), Expect = 1e-12
Identities = 29/261 (11%), Positives = 53/261 (20%), Gaps = 104/261 (39%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVE----PRV-----------DPRLRVECSLSTAFFF 1308
+ + V + E F R+ V+
Sbjct: 2 LLQVTISLSKVELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQ--------- 52
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
+ L I ED G Y C+A + G+
Sbjct: 53 -------------------------KEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEA 87
Query: 1369 ATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFV 1428
T+ L+ F
Sbjct: 88 ---------TVVLEIYQK--------------------------------------LTFR 100
Query: 1429 TQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN--RFNPIYDFGYVAMN 1486
+ Q+ + + C+ P V W + + + + RF + + +N
Sbjct: 101 EVVSPQEFKQG-EDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILN 157
Query: 1487 FGWVYPEDSGEYLCRATNLYG 1507
+ D G Y C
Sbjct: 158 ---INKSDEGIYRCEGRVEAR 175
Score = 55.6 bits (134), Expect = 2e-08
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 3/70 (4%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIR-STFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ P + W + ++ S R + L I ++ D IY C+
Sbjct: 119 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINKSDEGIYRCEGRVEARG 176
Query: 61 AVSTCTLKIE 70
+ + +
Sbjct: 177 EIDFRDIIVI 186
Score = 40.5 bits (95), Expect = 0.002
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
I ED G Y C+A + G+ + +++ K + ++ E + AE+
Sbjct: 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFR---EVVSPQEFKQGEDAEVV 117
Score = 39.8 bits (93), Expect = 0.003
Identities = 14/124 (11%), Positives = 23/124 (18%), Gaps = 50/124 (40%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTAFF 1307
+ F + ++ E RV P V R
Sbjct: 95 QKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFA-------- 146
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
+ +L I + D+G Y C +
Sbjct: 147 -------------------------MLANN--NLQILNINKSDEGIYRCEGRVEARGEID 179
Query: 1368 KATI 1371
I
Sbjct: 180 FRDI 183
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation,
immunoglobulin domain, membrane, glycoprote adhesion,
transmembrane; HET: NAG; 2.00A {Homo sapiens}
Length = 189
Score = 139 bits (353), Expect = 1e-37
Identities = 38/199 (19%), Positives = 70/199 (35%), Gaps = 13/199 (6%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
F + + P + + A P P + W + +T+ D + + ++ I
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQI 61
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI--SSAVINV 1756
+ D G++ +++V VPP+ +A
Sbjct: 62 -LNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN--------VPPAISMPQKSFNATAER 112
Query: 1757 GQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECV 1816
G+ F + S + + W +NGK I + +Y + L + + D G Y C
Sbjct: 113 GEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCR 170
Query: 1817 AMNNAGEARCEAELVVQSK 1835
A N AGE +A L V +
Sbjct: 171 ATNKAGEDEKQAFLQVFVQ 189
Score = 111 bits (280), Expect = 6e-28
Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 23/191 (12%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM- 1619
F Q+ ++GE A C RV+ P P V WL + + + +
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVC-RVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQ 60
Query: 1620 ------------------EHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEV 1661
E +G+I R + +K A ++ F
Sbjct: 61 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSC 120
Query: 1662 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
G P P I WFR I + + + + + L +R + D G + A N+ G+
Sbjct: 121 RASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGED 178
Query: 1722 KCSANLVVEEK 1732
+ A L V +
Sbjct: 179 EKQAFLQVFVQ 189
Score = 109 bits (275), Expect = 2e-27
Identities = 42/233 (18%), Positives = 72/233 (30%), Gaps = 52/233 (22%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS--RIKTINDFGF 973
F + + A CR ++ P+ V W ++ + ++ S R + +
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN- 58
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L+I ++ D G+Y C+ + + V V+
Sbjct: 59 --LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI----------VNV----------- 95
Query: 1034 LEEALYRKDELIPDEEKPNPPVFT-SQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF 1092
PP + Q N ++ F CR P I WF
Sbjct: 96 -------------------PPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFR 134
Query: 1093 NGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
NG+ + L + + D G Y+CRATNK G +A +
Sbjct: 135 NGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 185
Score = 108 bits (272), Expect = 6e-27
Identities = 45/212 (21%), Positives = 67/212 (31%), Gaps = 39/212 (18%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPI--FHKNRVKMVSDF 464
F + E K G+ A C V+ P V W ++ + + NR M+++
Sbjct: 2 MLTFREVVSPQE-FKQGEDAEVVCR---VSSSPAPAVSWLYHNEEVTTISDNRFAMLANN 57
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQD 512
I + D G Y C + +PP
Sbjct: 58 NLQ---ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISM--------PQKSF 106
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
N ++ F CR P I WF NG+ + L + +
Sbjct: 107 NATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINS 162
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
D G Y+CRATNK G +A L V V+
Sbjct: 163 DGGPYVCRATNKAGEDEKQAF-----LQVFVQ 189
Score = 94.8 bits (236), Expect = 5e-22
Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 20/144 (13%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIP--DIRYKTLEEDNLFT 1799
+F +S G+ A ++S++ V WL + +++ D R+ L +
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANN---N 58
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAE 1859
L I+ D G Y C A +++V P A ++ +
Sbjct: 59 LQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPP---------------AISMPQ 103
Query: 1860 PLKDQNVKEGSAVTLKCRITGKPR 1883
+ + G +T CR +G P
Sbjct: 104 KSFNATAERGEEMTFSCRASGSPE 127
Score = 88.7 bits (220), Expect = 5e-20
Identities = 40/215 (18%), Positives = 77/215 (35%), Gaps = 53/215 (24%)
Query: 592 AKVICKVL---TVIVEWFYNGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYECRA 646
A+V+C+V V W Y+ +++ +R+ + + IL+I + + G+Y C
Sbjct: 20 AEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNIN---KSDEGIYRCEG 76
Query: 647 TNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQA 706
+ ++ ++I+ +P
Sbjct: 77 RVEARGEIDFR--------DIIVIVNVP-------------------------------- 96
Query: 707 PVFTVPLSNID-DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P ++P + + GE F R + P+ + WF NGK ++ ++
Sbjct: 97 PAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT-- 152
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L + + D G Y CRA N GE A ++V
Sbjct: 153 ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 187
Score = 87.1 bits (216), Expect = 2e-19
Identities = 47/303 (15%), Positives = 76/303 (25%), Gaps = 118/303 (38%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
F +S + ++GE+A R + P V W ++
Sbjct: 2 MLTFREVVSPQE-FKQGEDAEVVCR--VSSSPAPAVSWLYH------------------- 39
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEIS 825
E VT+ S + +++ + L +I
Sbjct: 40 -----------------------NEEVTTIS---DNRFAMLANNNL-----------QIL 62
Query: 826 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGH 885
+ D G Y C + + R II+ +P
Sbjct: 63 NINKSDEGIYRCEGRVEARGEIDF--------RDIIVIVNVPP----------------- 97
Query: 886 EREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTND 945
A + T F CR +
Sbjct: 98 ------------------------------AISMPQKSFNATAERGEEMTFSCR--ASGS 125
Query: 946 PSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCK 1005
P + WF NGK + + L + ++ D G Y C+ATNK GE
Sbjct: 126 PEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAF 183
Query: 1006 LTV 1008
L V
Sbjct: 184 LQV 186
Score = 81.8 bits (202), Expect = 1e-17
Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 54/200 (27%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ P + W + ++ S R L I ++ D IY C+
Sbjct: 25 RVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN-NNLQILNINKSDEGIYRCEGRVEARGE 83
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
+ R ++ ++ P I +K + +
Sbjct: 84 IDF-------RDIIVIVNVPPA----ISMPQKSF---------------------NATAE 111
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
E + F CR G PE + WF NGK I + +
Sbjct: 112 RGEEMTFSCRAS---------GS----------PEPAISWFRNGKLIEENEKYILKGSNT 152
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
+ + + + D G YVC+
Sbjct: 153 --ELTVRNIINSDGGPYVCR 170
Score = 80.6 bits (199), Expect = 4e-17
Identities = 36/165 (21%), Positives = 53/165 (32%), Gaps = 13/165 (7%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W +N+ + + + L I+ D GIY + +
Sbjct: 32 PAVSWLYHNEEVTTISDNRFAMLANNN-LQILNINKSDEGIYRCEGRVEARGEIDFRDII 90
Query: 297 CLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS 354
V N P Q N + GE F G + + NGK IE +
Sbjct: 91 ------VIVNVPPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEEN 142
Query: 355 HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ + L + D G Y CRATNK G+ E L+
Sbjct: 143 EKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ 185
Score = 80.6 bits (199), Expect = 4e-17
Identities = 34/216 (15%), Positives = 58/216 (26%), Gaps = 53/216 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F ++ E K+ E+ CRV P V W ++ + +
Sbjct: 3 LTFREVVSPQEFKQGEDAEVVCRVS---------S----------SPAPAVSWLYHNEEV 43
Query: 169 --FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH------- 219
NR M+++ I + D G Y C+ A +
Sbjct: 44 TTISDNRFAMLANNNLQ---ILNINKSDEGIYRCE--GRV---EARGEIDFRDIIVIVNV 95
Query: 220 ----DFGYVALDIELMLKTLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYVA 264
+ + + F+ WF N K + K+
Sbjct: 96 PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--E 153
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER 300
L + D G Y +ATN G L+ +
Sbjct: 154 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQ 189
Score = 78.7 bits (194), Expect = 1e-16
Identities = 34/181 (18%), Positives = 54/181 (29%), Gaps = 39/181 (21%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK-TVYDFGFISLDMDYVYA 571
+ + CR S P + W ++ T S + + +L + +
Sbjct: 11 PQEFKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANN--NLQILNINK 66
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKV--------------LTVI--------------- 602
D G Y C + + +I V T
Sbjct: 67 SDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSP 126
Query: 603 ---VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ WF NGK + +Y L + + G Y CRATNK G D +A L
Sbjct: 127 EPAISWFRNGKLIEENEKYILKGSNTE--LTVRNIINSDGGPYVCRATNKAGEDEKQAFL 184
Query: 660 K 660
+
Sbjct: 185 Q 185
Score = 74.8 bits (184), Expect = 3e-15
Identities = 41/263 (15%), Positives = 69/263 (26%), Gaps = 89/263 (33%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFI-------NIS 1314
F + ++ E RV P P + ++
Sbjct: 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPA-----------------PAVSWLYHNEEVT 44
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
T + L +L I + D+G Y C + I
Sbjct: 45 TIS------------DNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI--- 89
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
++ + PP K+
Sbjct: 90 --------------------IVIVNV-----------------------PPAISMPQKSF 106
Query: 1435 DQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPE 1493
+ E + F C+ G P + WF NGK + ++ + + +
Sbjct: 107 NATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRN--IINS 162
Query: 1494 DSGEYLCRATNLYGMDETRAILK 1516
D G Y+CRATN G DE +A L+
Sbjct: 163 DGGPYVCRATNKAGEDEKQAFLQ 185
Score = 74.4 bits (183), Expect = 5e-15
Identities = 31/197 (15%), Positives = 52/197 (26%), Gaps = 48/197 (24%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLP--HKNRFNPIYDFG 1481
F + Q+ + + + C+ P V W + + + NRF + +
Sbjct: 2 MLTFREVVSPQE-FKQGEDAEVVCR--VSSSPAPAVSWLYHNEEVTTISDNRFAMLANNN 58
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLY-GMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
+N + D G Y C G + R I+ P
Sbjct: 59 LQILN---INKSDEGIYRCEGRVEARGEIDFRDIIVIVNVP------------------- 96
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLING 1600
A + + GE F R +G P P + W NG
Sbjct: 97 --------------------PAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNG 136
Query: 1601 HTIVNEIVRKITATETT 1617
I + + T
Sbjct: 137 KLIEENEKYILKGSNTE 153
Score = 66.7 bits (163), Expect = 2e-12
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P I WF+NG + + L++ ++ D Y C+ATN GE
Sbjct: 121 RASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGED 178
Query: 62 VSTCTLKI 69
L++
Sbjct: 179 EKQAFLQV 186
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila
melanogaster} PDB: 3pxj_A
Length = 212
Score = 139 bits (352), Expect = 2e-37
Identities = 53/207 (25%), Positives = 78/207 (37%), Gaps = 11/207 (5%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
A PP +K Q A F GDP P+I W + ++ + I
Sbjct: 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63
Query: 1697 LIMR---QVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
I+R D + +AEN G A A L + E + G P +
Sbjct: 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAG---FPVITQGPGTR 120
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGA 1812
VI VG K ++YW+KN K+ +L++ L I + ED G
Sbjct: 121 VIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDG---FLQIENSREEDQGK 177
Query: 1813 YECVAMNNAGEARCEA-ELVVQSKKAP 1838
YECVA N+ G +A L V+ ++
Sbjct: 178 YECVAENSMGTEHSKATNLYVKVRRVG 204
Score = 121 bits (305), Expect = 5e-31
Identities = 54/231 (23%), Positives = 76/231 (32%), Gaps = 47/231 (20%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA-GSRIKTI-NDFGF 973
PE + P + + +A F C DP ++ W NGK +S SR + G
Sbjct: 6 PPEIIRKPQNQGVRVGGVASFYCA--ARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGI 63
Query: 974 VILEINDVYL-RDSGLYTCKATNKHGEA-TTSCKLTVKGRQGIDVEPQVSAIFANATKNI 1031
IL I V RD Y C A N G+A + LT+
Sbjct: 64 SILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYE--------------------- 102
Query: 1032 QKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
D+ PV T + V C+ +PT I W
Sbjct: 103 --------------GDKTPAGFPVITQGPG-TRVIEVGHTVLMTCK--AIGNPTPNIYWI 145
Query: 1092 FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
N + ++ D G L ++ D G+Y C A N GT +KA
Sbjct: 146 KNQTKVDMSNPRYSLKD-G--FLQIENSREEDQGKYECVAENSMGTEHSKA 193
Score = 118 bits (297), Expect = 5e-30
Identities = 38/203 (18%), Positives = 60/203 (29%), Gaps = 31/203 (15%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI-VNEIVRKI-------- 1611
P + +P+ Q V+ G A F G P P ++W NG + + +
Sbjct: 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGIS 64
Query: 1612 --TATETTEMEHKG----------------KIQERVVDASEKPAKPPVFTKKIQPCRAFE 1653
+ + + PA PV T+
Sbjct: 65 ILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEV 124
Query: 1654 QDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 1713
+ G+P P I W + + S L + ED G + +
Sbjct: 125 GHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYS---LKDGFLQIENSREEDQGKYECV 181
Query: 1714 AENRGGKAKCSA-NLVVEEKRQG 1735
AEN G A NL V+ +R G
Sbjct: 182 AENSMGTEHSKATNLYVKVRRVG 204
Score = 114 bits (288), Expect = 9e-29
Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 16/149 (10%)
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKI-IPDIRYKTLEEDNL 1797
G PP + + + VG +A F P + W KNGKK+ RY LE+
Sbjct: 3 GAHPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGG 62
Query: 1798 FTLLIIEAVV--EDSGAYECVAMNNAGEA-RCEAELVVQSKKAPGKQAPAPGAAVAQDEA 1854
++L IE V D YECVA N G+A +A L +
Sbjct: 63 ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEG------------DKTPAGF 110
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + + ++ G V + C+ G P
Sbjct: 111 PVITQGPGTRVIEVGHTVLMTCKAIGNPT 139
Score = 96.4 bits (240), Expect = 2e-22
Identities = 46/216 (21%), Positives = 69/216 (31%), Gaps = 39/216 (18%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDF 464
PP+ ++ ++ G A F C DP + W NGK + +
Sbjct: 5 HPPEIIRKPQNQG-VRVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPG 61
Query: 465 GFVVMDIAYVQS-HDSGEYVCRAWNNF----------------IFIPPFPIFIFHQIRLP 507
G ++ I V++ D Y C A N FP+
Sbjct: 62 GISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQG----- 116
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
P + V C+ +PT I W N + ++ D G L ++
Sbjct: 117 -PG--TRVIEVGHTVLMTCK--AIGNPTPNIYWIKNQTKVDMSNPRYSLKD-G--FLQIE 168
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
D G+Y C A N GT +KA L V V
Sbjct: 169 NSREEDQGKYECVAENSMGTEHSKA----TNLYVKV 200
Score = 92.2 bits (229), Expect = 6e-21
Identities = 34/204 (16%), Positives = 53/204 (25%), Gaps = 60/204 (29%)
Query: 819 ISFHEISPVY-PEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDK 876
IS I PV D Y C A N G+AV+ A++ +
Sbjct: 63 ISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGD------------------ 104
Query: 877 IAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHF 936
+ P P +
Sbjct: 105 ----------------------------------KTPAGFPVITQGPGTRVIEVGHTVLM 130
Query: 937 ECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNK 996
C+ +P+ + W N + + ++ D L+I + D G Y C A N
Sbjct: 131 TCK--AIGNPTPNIYWIKNQTKVDMSNPRYSLKDGF---LQIENSREEDQGKYECVAENS 185
Query: 997 HGEATTSC-KLTVKGRQGIDVEPQ 1019
G + L VK R+
Sbjct: 186 MGTEHSKATNLYVKVRRVGTKHHH 209
Score = 91.8 bits (228), Expect = 9e-21
Identities = 41/212 (19%), Positives = 58/212 (27%), Gaps = 44/212 (20%)
Query: 603 VEWFYNGKKLP--HGHRYRTFHDFGIVILDIL-YCYEENSGVYECRATNKYGSDVTKASL 659
+ W NGKK+ GI IL I + YEC A N G V+
Sbjct: 38 IVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSAD-- 95
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
A L E PV T +
Sbjct: 96 -------------------------------ATLTIYEGDKTPA-GFPVITQGPGTRV-I 122
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
G + +P + W N + + + D L+I ED G+
Sbjct: 123 EVGHTVLMTCK--AIGNPTPNIYWIKNQTKVDMSNPRYSLKDGF---LQIENSREEDQGK 177
Query: 780 YSCRAYNDYGEAVTSASM-KVQGKRSIILESQ 810
Y C A N G + A+ V+ +R
Sbjct: 178 YECVAENSMGTEHSKATNLYVKVRRVGTKHHH 209
Score = 87.5 bits (217), Expect = 3e-19
Identities = 41/200 (20%), Positives = 56/200 (28%), Gaps = 55/200 (27%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF--DFGLVTLSINSLRA-DDSAIYTCKATNLLGEAV 62
DP I W KNG +S + G+ L I +RA D A Y C A N +G+AV
Sbjct: 33 DPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAV 92
Query: 63 S-TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
S TL I + + PV +
Sbjct: 93 SADATLTI-----------------------------YEGDKTPAGFPVITQGPGTRVIE 123
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
V C+ G P + W N + N + D
Sbjct: 124 VGHTVLMTCKAI---------GN----------PTPNIYWIKNQTKVDMSNPRYSLKDGF 164
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
I + D G+Y C
Sbjct: 165 LQ---IENSREEDQGKYECV 181
Score = 86.8 bits (215), Expect = 5e-19
Identities = 33/186 (17%), Positives = 51/186 (27%), Gaps = 44/186 (23%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
PP + + Q+Q V + F C GDP + W NGK + + +
Sbjct: 5 HPPEIIRKP--QNQGVRVGGVASFYCA--ARGDPPPSIVWRKNGKKVSGTQSRYTVLEQP 60
Query: 1482 ---YVAMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKSIE 1537
+ D Y C A N G + A L
Sbjct: 61 GGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTI-------------------- 100
Query: 1538 KIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWL 1597
D+ P PV P + ++ G + G P P + W+
Sbjct: 101 ---------------YEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWI 145
Query: 1598 INGHTI 1603
N +
Sbjct: 146 KNQTKV 151
Score = 80.2 bits (198), Expect = 9e-17
Identities = 37/182 (20%), Positives = 56/182 (30%), Gaps = 14/182 (7%)
Query: 237 PFTEWFVNNKPLPA--GAKFKTTHDFGYVALDIVGAYA-EDSGIYTVKATNSKGSA-TTS 292
P W N K + G L I A D Y A N G A +
Sbjct: 36 PSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSAD 95
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE 352
TL E +P+ + + G +G+ T + ++ N ++
Sbjct: 96 ATLTIYEGDKTPAGFPVITQGPGTRV-IEVGHTVLMTCK--AIGNPTPNIYWIKNQTKVD 152
Query: 353 ASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT 412
S+ ++ G L+I ++ ED G Y C A N G V T
Sbjct: 153 MSNPRYSLKD-G--FLQIENSREEDQGKYECVAENSMGTEHSKATNLYVK----VRRVGT 205
Query: 413 SH 414
H
Sbjct: 206 KH 207
Score = 79.1 bits (195), Expect = 2e-16
Identities = 42/208 (20%), Positives = 57/208 (27%), Gaps = 50/208 (24%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKP--MKTGSRFRTFCDF 762
P N +R G A F DP + W NGK
Sbjct: 5 HPPEIIRKPQNQG-VRVGGVASFYCA--ARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPG 61
Query: 763 GFVILEISPVY-PEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILE----SQLPKGME 816
G IL I PV D Y C A N G+AV+ A++ + +Q P
Sbjct: 62 GISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRV 121
Query: 817 V----------------------------------FISFHE----ISPVYPEDCGQYSCR 838
+ S + I ED G+Y C
Sbjct: 122 IEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECV 181
Query: 839 AYNDYGEAVTSASM-KVQGKRSIILESQ 865
A N G + A+ V+ +R
Sbjct: 182 AENSMGTEHSKATNLYVKVRRVGTKHHH 209
Score = 77.5 bits (191), Expect = 6e-16
Identities = 39/261 (14%), Positives = 67/261 (25%), Gaps = 80/261 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLR-----VECSLSTAFFFPFINIS 1314
PP I + ++ V+ F P P + + S + + +
Sbjct: 4 AHPPEIIRKPQNQGVRVGGVASFYCAARGDPP--PSIVWRKNGKKVSGTQSRYTVLEQ-- 59
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVY-PEDQGEYVCRAYNDHGEAFTKATISC 1373
G L I+ V D Y C A N G+A +
Sbjct: 60 --------------------PGGISILRIEPVRAGRDDAPYECVAENGVGDAVSA----- 94
Query: 1374 KKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKT 1433
L + P
Sbjct: 95 ----DATLTIYEG-------------------------------DKTPAGFPVITQGP-- 117
Query: 1434 QDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYP 1492
+++E+ + C+ +G+P + W N + N + D N
Sbjct: 118 GTRVIEVGHTVLMTCK--AIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIEN---SRE 172
Query: 1493 EDSGEYLCRATNLYGMDETRA 1513
ED G+Y C A N G + ++A
Sbjct: 173 EDQGKYECVAENSMGTEHSKA 193
Score = 76.8 bits (189), Expect = 1e-15
Identities = 38/211 (18%), Positives = 52/211 (24%), Gaps = 48/211 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P I + + F C G DP + W NGK +
Sbjct: 7 PEIIRKPQNQGVRVGGVASFYCAAR---------G----------DPPPSIVWRKNGKKV 47
Query: 169 --FHKNRVKMVSDFGFVVMDIAYVQS-HDSGEYVCQWFVNNKPLPAGAKF----KTTHDF 221
+ G ++ I V++ D Y C N A
Sbjct: 48 SGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA-ENGVGDAVSADATLTIYEGDKT 106
Query: 222 GYVALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYV 263
I T V P W N + + D G
Sbjct: 107 PAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLKD-G-- 163
Query: 264 ALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
L I + ED G Y A NS G+ + T
Sbjct: 164 FLQIENSREEDQGKYECVAENSMGTEHSKAT 194
Score = 73.3 bits (180), Expect = 2e-14
Identities = 41/185 (22%), Positives = 59/185 (31%), Gaps = 44/185 (23%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG---FISLDMDYV 569
N V G F C DP I W NG+ + TV + I
Sbjct: 15 NQGVRVGGVASFYCAAR--GDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVR 72
Query: 570 YARDSGEYICRATNKWGTAMTK---------------------------------AKVIC 596
RD Y C A N G A++ + C
Sbjct: 73 AGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTC 132
Query: 597 KVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
K + T + W N K+ + + D + I + EE+ G YEC A N G++
Sbjct: 133 KAIGNPTPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSR---EEDQGKYECVAENSMGTE 189
Query: 654 VTKAS 658
+KA+
Sbjct: 190 HSKAT 194
Score = 60.2 bits (146), Expect = 6e-10
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ +P I W KN + + + S D G L I + R +D Y C A N +G
Sbjct: 133 KAIGNPTPNIYWIKNQTKVDMSNPRYSLKD-G--FLQIENSREEDQGKYECVAENSMGTE 189
Query: 62 VSTCT-LKIEDR 72
S T L ++ R
Sbjct: 190 HSKATNLYVKVR 201
Score = 50.2 bits (120), Expect = 1e-06
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 29/135 (21%)
Query: 1255 IEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFIN 1312
E D+ P P + ++ V + P P I
Sbjct: 101 YEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPT-----------------PNI- 142
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKA--- 1369
+ I N V S+P + L L I+ EDQG+Y C A N G +KA
Sbjct: 143 ----YWIKNQ--TKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNL 196
Query: 1370 TISCKKIPTIQLQNQ 1384
+ +++ T +
Sbjct: 197 YVKVRRVGTKHHHHH 211
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif,
immunoglobulin-like domain, growth facto factor receptor,
extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C
2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C
1fq9_C* 1evt_C
Length = 231
Score = 138 bits (350), Expect = 8e-37
Identities = 46/228 (20%), Positives = 80/228 (35%), Gaps = 21/228 (9%)
Query: 1627 ERVVDASEKPAKPPVFTK--KIQP--CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS 1682
E V + + P +T K++ + +F G+P+PT++W +
Sbjct: 3 EDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQ 62
Query: 1683 SPDFQ-IHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVV 1741
+ LIM V D G + + EN G + +L V E R
Sbjct: 63 EHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE-----RSRHR 117
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKK-----------IIPDIRYK 1790
P ++A VG F K+ + + W+K+ +K + +++
Sbjct: 118 PILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHS 177
Query: 1791 TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+ N L + D+G Y C N G+A A L V K+
Sbjct: 178 GINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225
Score = 121 bits (305), Expect = 8e-31
Identities = 52/258 (20%), Positives = 76/258 (29%), Gaps = 60/258 (23%)
Query: 906 EDRIEEDL--GKAPEFLTT----PTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL 959
ED + E+ +AP + T + + F C +P T+ W NGK
Sbjct: 3 EDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCP--AGGNPMPTMRWLKNGKEF 60
Query: 960 SAGSRIKTI-NDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEP 1018
RI L + V D G YTC N++G + L V R
Sbjct: 61 KQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVER------- 113
Query: 1019 QVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRL 1078
+ P + N G V F C+
Sbjct: 114 ------------------------------SRHRPILQAGLPA-NASTVVGGDVEFVCK- 141
Query: 1079 EPKSDPTMRIDWFFN-----------GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY 1127
SD I W + G P+ + + L + V D+GEY
Sbjct: 142 -VYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEY 200
Query: 1128 ICRATNKWGTAMTKAKVI 1145
IC+ +N G A A +
Sbjct: 201 ICKVSNYIGQANQSAWLT 218
Score = 104 bits (261), Expect = 4e-25
Identities = 26/161 (16%), Positives = 47/161 (29%), Gaps = 19/161 (11%)
Query: 1728 VVEEKRQGGRGGVVPPSFLTTI----SSAVINVGQLARFDAKISATKPLDVYWLKNGKKI 1783
+ E+ P + T + +F + WLKNGK+
Sbjct: 1 MAEDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEF 60
Query: 1784 IPDIRYKTLE-EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQA 1842
+ R + + ++L++ V D G Y CV N G L V
Sbjct: 61 KQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVV--------- 111
Query: 1843 PAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
++ A + + G V C++ +
Sbjct: 112 -----ERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQ 147
Score = 101 bits (252), Expect = 7e-24
Identities = 40/219 (18%), Positives = 58/219 (26%), Gaps = 41/219 (18%)
Query: 1555 EDEKPKEAPVFVS----QPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRK 1610
E+ K AP + + + V +F G P P + WL NG E
Sbjct: 8 ENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIG 67
Query: 1611 ITATET---------TEMEHKGK---------------IQERVVDASEKPAKPPVFTKKI 1646
KG VV+ S +P +
Sbjct: 68 GYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERS--RHRPILQAGLP 125
Query: 1647 QPCRAFEQDQARFEVEFDGDPLPTIKWFRE-----------DFPITSSPDFQIHTFSTKS 1695
F + D P I+W + P S
Sbjct: 126 ANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAE 185
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 1734
+L + V D+G + N G+A SA L V K+Q
Sbjct: 186 VLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQ 224
Score = 101 bits (252), Expect = 8e-24
Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 17/181 (9%)
Query: 322 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAF-GMVVLEILGTKIEDTGV 380
F G+ T+ +L NGK + HRI L + D G
Sbjct: 33 AANTVKFRCP--AGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGN 90
Query: 381 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE 440
YTC N++G + +L+ V++S+ +P + G F C +D +
Sbjct: 91 YTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANAS-TVVGGDVEFVC--KVYSDAQ 147
Query: 441 LKVEWFHN-----------GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
++W + G P + ++ V+ + V D+GEY+C+ N
Sbjct: 148 PHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNY 207
Query: 490 F 490
Sbjct: 208 I 208
Score = 98.0 bits (244), Expect = 1e-22
Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 43/237 (18%)
Query: 394 ISVNLECVDKSKGQPPKFTSHIK---SLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNG 449
++ + + + + P +T+ K L + ++ F C P +P + W NG
Sbjct: 1 MAEDFVSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRC---PAGGNPMPTMRWLKNG 57
Query: 450 KPIFHKNRVKM-VSDFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFP 497
K ++R+ + + V D G Y C N + +
Sbjct: 58 KEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHR 117
Query: 498 IFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN-----------GRP 546
+ LP+ N G V F C+ SD I W + G P
Sbjct: 118 PILQ--AGLPA----NASTVVGGDVEFVCK--VYSDAQPHIQWIKHVEKNGSKYGPDGLP 169
Query: 547 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+ + + L + V D+GEYIC+ +N G A A LTV+
Sbjct: 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAW-----LTVLP 221
Score = 90.0 bits (223), Expect = 5e-20
Identities = 35/197 (17%), Positives = 54/197 (27%), Gaps = 53/197 (26%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEM---QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP 1476
K+ P + K + +L + + KF C G+P + W NGK ++R
Sbjct: 11 NNKRAPYWTNTEKMEKRLHAVPAANTVKFRCP--AGGNPMPTMRWLKNGKEFKQEHRIG- 67
Query: 1477 IYDFGYVAMNFGW------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLP 1530
GY N W V P D G Y C N YG L
Sbjct: 68 ----GYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD-------------- 109
Query: 1531 KGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYP 1590
V + + P G F +V
Sbjct: 110 -----------------------VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDA 146
Query: 1591 RPRVMWLINGHTIVNEI 1607
+P + W+ + ++
Sbjct: 147 QPHIQWIKHVEKNGSKY 163
Score = 88.4 bits (219), Expect = 2e-19
Identities = 37/181 (20%), Positives = 58/181 (32%), Gaps = 15/181 (8%)
Query: 241 WFVNNKPLPAGAKFKTTH-DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W N K + + +L + D G YT N GS + L +E
Sbjct: 53 WLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVE 112
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFE----ASLIPV-----GDQTMTVEFLYNGKP 350
R H L + + S G F + P + ++ +G P
Sbjct: 113 R--SRHRPILQAGLPANAS-TVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLP 169
Query: 351 IEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPK 410
+ +++ VL + D G Y C+ +N GQA S L + K Q P
Sbjct: 170 YLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQ--QAPG 227
Query: 411 F 411
Sbjct: 228 R 228
Score = 88.0 bits (218), Expect = 3e-19
Identities = 35/208 (16%), Positives = 59/208 (28%), Gaps = 62/208 (29%)
Query: 6 DPNLKIEWFKNGVPLSLGSRI-RSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+P + W KNG RI +L + S+ D YTC N G T
Sbjct: 46 NPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
L + +R RP + +
Sbjct: 106 YHLDVVER-----SRHRP--------------------------ILQAGLPANASTVVGG 134
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN-----------GKPIFHKNR 173
+V F C+V +D + ++W + G P +
Sbjct: 135 DVEFVCKVY-------------------SDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLK 175
Query: 174 VKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
++ V+ + V D+GEY+C+
Sbjct: 176 HSGINSSNAEVLALFNVTEADAGEYICK 203
Score = 86.9 bits (215), Expect = 6e-19
Identities = 37/227 (16%), Positives = 64/227 (28%), Gaps = 69/227 (30%)
Query: 806 ILESQLPKGMEVFISFHE--ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE 863
+ G +V + V P D G Y+C N+YG
Sbjct: 60 FKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG------------------- 100
Query: 864 SQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTP 923
+I+ L D +E + P
Sbjct: 101 ---------------------------SINHTYHL--------DVVERSRHRPILQAGLP 125
Query: 924 TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAG-----------SRIKTINDFG 972
+ + F C+ +D ++W + + + + IN
Sbjct: 126 ANASTVVGGDVEFVCK--VYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSN 183
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
+L + +V D+G Y CK +N G+A S LTV +Q +
Sbjct: 184 AEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQAPGREK 230
Score = 83.8 bits (207), Expect = 7e-18
Identities = 39/221 (17%), Positives = 65/221 (29%), Gaps = 60/221 (27%)
Query: 698 TADIEHRQAPVFTVPL---SNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS 754
+ + +++AP +T + + F +P + W NGK K
Sbjct: 7 SENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCP--AGGNPMPTMRWLKNGKEFKQEH 64
Query: 755 RFRTF-CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI--ILESQL 811
R + L + V P D G Y+C N+YG + + V + IL++ L
Sbjct: 65 RIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGL 124
Query: 812 PKGMEVF----ISFH--------------------------------------------- 822
P + F
Sbjct: 125 PANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNA 184
Query: 823 ---EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 860
+ V D G+Y C+ N G+A SA + V K+
Sbjct: 185 EVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225
Score = 81.1 bits (200), Expect = 6e-17
Identities = 36/215 (16%), Positives = 61/215 (28%), Gaps = 52/215 (24%)
Query: 603 VEWFYNGKKLPHGHRYRTFH-DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+ W NGK+ HR + L + + G Y C N+YGS L
Sbjct: 51 MRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD- 109
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
++E + + +N
Sbjct: 110 ------VVER------------------------------SRHRPILQAGLPANAS-TVV 132
Query: 722 GENAHFEARLTPTDDPKLKVEWFWN-----------GKPMKTGSRFRTFCDFGFVILEIS 770
G + F + D + ++W + G P + +L +
Sbjct: 133 GGDVEFVCK--VYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALF 190
Query: 771 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
V D G+Y C+ N G+A SA + V K+
Sbjct: 191 NVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225
Score = 79.9 bits (197), Expect = 2e-16
Identities = 36/201 (17%), Positives = 59/201 (29%), Gaps = 47/201 (23%)
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT-VYDFGFI 562
+ VP A V F C +P + W NG+ F R+
Sbjct: 19 TNTEKMEKRLHAVPAANTVKFRC--PAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHW 76
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI--------------------------- 595
SL M+ V D G Y C N++G+ +
Sbjct: 77 SLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDV 136
Query: 596 ---CKV---LTVIVEWFYNGKKLPHG-----------HRYRTFHDFGIVILDILYCYEEN 638
CKV ++W + +K ++ + +L + E +
Sbjct: 137 EFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEAD 196
Query: 639 SGVYECRATNKYGSDVTKASL 659
+G Y C+ +N G A L
Sbjct: 197 AGEYICKVSNYIGQANQSAWL 217
Score = 70.7 bits (173), Expect = 2e-13
Identities = 41/297 (13%), Positives = 68/297 (22%), Gaps = 105/297 (35%)
Query: 1255 IEEDEIPEEPPRFIT----EIESVTVQEAEPVRFETRVE--PR-----------VDPRLR 1297
+ E+ + P + E V A V+F P R
Sbjct: 6 VSENSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHR 65
Query: 1298 VECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCR 1357
+ SL ++ V P D+G Y C
Sbjct: 66 IGGYK-------------------------------VRNQHWSLIMESVVPSDKGNYTCV 94
Query: 1358 AYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLY 1417
N++G + D+
Sbjct: 95 VENEYGSINHTYHL-------------------------------------------DVV 111
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWF-----------LNGK 1466
E + +P V +F C+ D ++W +G
Sbjct: 112 ERSRHRPILQAGLPANA-STVVGGDVEFVCK--VYSDAQPHIQWIKHVEKNGSKYGPDGL 168
Query: 1467 PLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGI 1523
P + + I + V D+GEY+C+ +N G A L K
Sbjct: 169 PYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPKQQA 225
Score = 70.7 bits (173), Expect = 2e-13
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 1047 DEEKPNPPVFTSQLQD---NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 1103
+ P +T+ + VP A V F C +P + W NG+ F R+
Sbjct: 9 NSNNKRAPYWTNTEKMEKRLHAVPAANTVKFRC--PAGGNPMPTMRWLKNGKEFKQEHRI 66
Query: 1104 KT-VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAK--VICKAKHDIVTESQLPD 1160
SL M+ V D G Y C N++G+ V+ +++H + ++ LP
Sbjct: 67 GGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPA 126
Query: 1161 SMSA 1164
+ S
Sbjct: 127 NAST 130
Score = 66.5 bits (162), Expect = 6e-12
Identities = 37/237 (15%), Positives = 56/237 (23%), Gaps = 75/237 (31%)
Query: 109 PVFISHL----NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
P + + V F C G +P + W N
Sbjct: 16 PYWTNTEKMEKRLHAVPAANTVKFRCPAG---------G----------NPMPTMRWLKN 56
Query: 165 GKPIFHKNRVKM-VSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGY 223
GK ++R+ + + V D G Y C V N+ G+ T H
Sbjct: 57 GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC--VVENE---YGSINHTYH---- 107
Query: 224 VALDIELMLKTLVPFTE-----------------------------WF-----------V 243
LD+ + W
Sbjct: 108 --LDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGP 165
Query: 244 NNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER 300
+ P K + L + D+G Y K +N G A S L L +
Sbjct: 166 DGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222
Score = 52.6 bits (126), Expect = 3e-07
Identities = 15/82 (18%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
Query: 2 EPRADPNLKIEWFKN-----------GVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIY 50
+ +D I+W K+ G+P + L++ ++ D+ Y
Sbjct: 141 KVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEY 200
Query: 51 TCKATNLLGEAVSTCTLKIEDR 72
CK +N +G+A + L + +
Sbjct: 201 ICKVSNYIGQANQSAWLTVLPK 222
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling
protein,transferase; 2.21A {Rattus norvegicus}
Length = 192
Score = 135 bits (342), Expect = 3e-36
Identities = 49/203 (24%), Positives = 72/203 (35%), Gaps = 16/203 (7%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS 1692
+EK K PV T ++ A ++ A F + P P I W R I +
Sbjct: 1 AEKLPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDT-RYSIRE 59
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENR-GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISS 1751
+L + V D G++ A N GG + L V+ + P +
Sbjct: 60 NGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK----------MKPKITRPPIN 109
Query: 1752 AVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSG 1811
I G A V W+K + + R LE +L I ED+G
Sbjct: 110 VKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLESG---SLRIHNVQKEDAG 166
Query: 1812 AYECVAMNNAGEARC-EAELVVQ 1833
Y CVA N+ G A +L V+
Sbjct: 167 QYRCVAKNSLGTAYSKLVKLEVE 189
Score = 123 bits (310), Expect = 5e-32
Identities = 55/233 (23%), Positives = 74/233 (31%), Gaps = 52/233 (22%)
Query: 911 EDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIND 970
E L KAP T + +A F C + P + W N + +I +
Sbjct: 2 EKLPKAPVITTPLETVDALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIRE 59
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVKGRQGIDVEPQVSAIFANATK 1029
G + L I V D G+Y C A N G A SC L VK
Sbjct: 60 NGQL-LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKM------------------- 99
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRID 1089
P T N+ + E K C +P +
Sbjct: 100 -----------------------KPKITRPPI-NVKIIEGLKAVLPC--TTMGNPKPSVS 133
Query: 1090 WFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
W SR+ V + G SL + V D+G+Y C A N GTA +K
Sbjct: 134 WIKGDSALRENSRI-AVLESG--SLRIHNVQKEDAGQYRCVAKNSLGTAYSKL 183
Score = 112 bits (281), Expect = 4e-28
Identities = 41/191 (21%), Positives = 64/191 (33%), Gaps = 20/191 (10%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI-VNEIVRKITATE 1615
EK +APV + E E A F V YP+P + W N I + + I
Sbjct: 2 EKLPKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG 61
Query: 1616 TT------EMEHKG--------KIQERVVDASEKP-AKPPVFTKKIQPCRAFEQDQARFE 1660
E G + V P T+ + E +A
Sbjct: 62 QLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLP 121
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
G+P P++ W + D + + + + L + V ED+G + +A+N G
Sbjct: 122 CTTMGNPKPSVSWIKGDSALRENSRIAVLESGS---LRIHNVQKEDAGQYRCVAKNSLGT 178
Query: 1721 AKCS-ANLVVE 1730
A L VE
Sbjct: 179 AYSKLVKLEVE 189
Score = 104 bits (261), Expect = 2e-25
Identities = 48/208 (23%), Positives = 79/208 (37%), Gaps = 34/208 (16%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+ P T+ +++++ + A F C + P+ ++ W N I + + + G
Sbjct: 6 KAPVITTPLETVD-ALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIRENGQ 62
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNLD 515
++ I V+ D G Y C A N + + P +I P P N+
Sbjct: 63 LLT-ILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKP-------KITRP-PI--NVK 111
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSG 575
+ E K C +P + W SR+ V + G SL + V D+G
Sbjct: 112 IIEGLKAVLPC--TTMGNPKPSVSWIKGDSALRENSRI-AVLESG--SLRIHNVQKEDAG 166
Query: 576 EYICRATNKWGTAMTKAKVICKVLTVIV 603
+Y C A N GTA +K L V V
Sbjct: 167 QYRCVAKNSLGTAYSKL----VKLEVEV 190
Score = 95.6 bits (238), Expect = 3e-22
Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 14/183 (7%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P+ + + + + E+A F + + + N I+ ++ G +
Sbjct: 8 PVITTPLETV-DALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIRENGQL- 63
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L IL + D G+Y C A N G A S V PK T +++ + +G A
Sbjct: 64 LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK----MKPKITRPPINVK-IIEGLKA 118
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
C T + +P+ V W + +R+ ++ I VQ D+G+Y C A
Sbjct: 119 VLPC--TTMGNPKPSVSWIKGDSALRENSRIAVLESGSLR---IHNVQKEDAGQYRCVAK 173
Query: 488 NNF 490
N+
Sbjct: 174 NSL 176
Score = 93.6 bits (233), Expect = 1e-21
Identities = 33/145 (22%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIP-DIRYKTLEEDNLFT 1799
P T + + V ++A F + + +P ++ W +N I D RY E
Sbjct: 7 APVITTPLETVDALVEEVATFMCAVESYPQP-EISWTRNKILIKLFDTRYSIRENGQ--L 63
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L I+ D G Y C A N G A L V+ P +
Sbjct: 64 LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVK-------------------MKPKIT 104
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + EG L C G P+
Sbjct: 105 RPPINVKIIEGLKAVLPCTTMGNPK 129
Score = 89.8 bits (223), Expect = 3e-20
Identities = 37/200 (18%), Positives = 58/200 (29%), Gaps = 58/200 (29%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ P +I W +N + + L S + G L+I S+ D IY C A N +G A
Sbjct: 30 AVESYPQPEISWTRNKILIKLFDTRYSIRENG-QLLTILSVEDSDDGIYCCTANNGVGGA 88
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
V +C V P +V+
Sbjct: 89 VESCGALQ-----------------------------------VKMKPKITRPPINVKII 113
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
E C G +P+ V W + +R+ ++
Sbjct: 114 EGLKAVLPCTTM---------G----------NPKPSVSWIKGDSALRENSRIAVLESGS 154
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
I VQ D+G+Y C
Sbjct: 155 LR---IHNVQKEDAGQYRCV 171
Score = 88.6 bits (220), Expect = 7e-20
Identities = 30/185 (16%), Positives = 47/185 (25%), Gaps = 45/185 (24%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
+ + P T ++T + + F C P ++ W N + + I
Sbjct: 2 EKLPKAPVITTPLETV-DALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIR 58
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEK 1538
+ G + + V D G Y C A N G
Sbjct: 59 ENGQL-LTILSVEDSDDGIYCCTANNGVGGAVESCGALQV-------------------- 97
Query: 1539 IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLI 1598
K P P K+ EG A G P+P V W+
Sbjct: 98 ---------------------KMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIK 136
Query: 1599 NGHTI 1603
+
Sbjct: 137 GDSAL 141
Score = 84.0 bits (208), Expect = 3e-18
Identities = 41/199 (20%), Positives = 58/199 (29%), Gaps = 49/199 (24%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ W N + + + G + L IL + + G+Y C A N G V V
Sbjct: 39 ISWTRNKILIKLFDTRYSIRENGQL-LTILSVEDSDDGIYCCTANNGVGGAVESCGALQV 97
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
P T P N+ + EG
Sbjct: 98 K-----------------------------------------MKPKITRPPINVK-IIEG 115
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
A +PK V W ++ SR L I V ED GQY C
Sbjct: 116 LKAVLPCT--TMGNPKPSVSWIKGDSALRENSRIAVLESGS---LRIHNVQKEDAGQYRC 170
Query: 783 RAYNDYGEAVTS-ASMKVQ 800
A N G A + ++V+
Sbjct: 171 VAKNSLGTAYSKLVKLEVE 189
Score = 83.2 bits (206), Expect = 5e-18
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 41/188 (21%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+APV T PL +D E A F P+ ++ W N +K + + G
Sbjct: 6 KAPVITTPLETVD-ALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIRENGQ 62
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTS-ASMKVQGKRSIILE---SQLPKGMEVF-- 818
+ L I V D G Y C A N G AV S +++V+ K I ++ +G++
Sbjct: 63 L-LTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLP 121
Query: 819 -------------------------ISFHE-----ISPVYPEDCGQYSCRAYNDYGEAVT 848
I+ E I V ED GQY C A N G A +
Sbjct: 122 CTTMGNPKPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYS 181
Query: 849 S-ASMKVQ 855
++V+
Sbjct: 182 KLVKLEVE 189
Score = 80.2 bits (198), Expect = 6e-17
Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P+ P ++ + E A C +P +V W AL SRI +
Sbjct: 100 KPKITRPPINVKIIEGLKAVLPCT--TMGNPKPSVSWIKGDSALRENSRIAVLESGS--- 154
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVK 1009
L I++V D+G Y C A N G A + KL V+
Sbjct: 155 LRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVE 189
Score = 77.5 bits (191), Expect = 5e-16
Identities = 33/174 (18%), Positives = 50/174 (28%), Gaps = 35/174 (20%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+D F C +S P I W N ++ + G L + V
Sbjct: 16 TVDALVEEVATFMCA--VESYPQPEISWTRNKILIKLFDTRYSIRENGQ-LLTILSVEDS 72
Query: 573 DSGEYICRATNKWGTAMTKAKVI--------------------------CKVL---TVIV 603
D G Y C A N G A+ + C + V
Sbjct: 73 DDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSV 132
Query: 604 EWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKA 657
W L R + I ++ +E++G Y C A N G+ +K
Sbjct: 133 SWIKGDSALRENSRIAVLESGSLRIHNVQ---KEDAGQYRCVAKNSLGTAYSKL 183
Score = 76.7 bits (189), Expect = 9e-16
Identities = 41/274 (14%), Positives = 71/274 (25%), Gaps = 108/274 (39%)
Query: 1258 DEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV------------DPRLRVECS 1301
+++P+ P T +E+V E F V +P + D R + +
Sbjct: 2 EKLPK-APVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIREN 60
Query: 1302 LSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYND 1361
L I V D G Y C A N
Sbjct: 61 GQL------------------------------------LTILSVEDSDDGIYCCTANNG 84
Query: 1362 HGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEK 1421
G A + +Q++
Sbjct: 85 VGGAVE------------------------SCGALQVKM--------------------- 99
Query: 1422 KQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF 1480
P+ + + C +G+P V W L +R + +
Sbjct: 100 --KPKITRPP--INVKIIEGLKAVLPCT--TMGNPKPSVSWIKGDSALRENSRIA-VLES 152
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
G + ++ V ED+G+Y C A N G ++ +
Sbjct: 153 GSLRIHN--VQKEDAGQYRCVAKNSLGTAYSKLV 184
Score = 75.1 bits (185), Expect = 3e-15
Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 47/211 (22%)
Query: 103 ELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWF 162
E + +PV + L V+ E F C VE P+ ++ W
Sbjct: 2 EKLPKAPVITTPLETVDALVEEVATFMCAVE---------S----------YPQPEISWT 42
Query: 163 HNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH--- 219
N I + + + G ++ I V+ D G Y C NN G ++
Sbjct: 43 RNKILIKLFDTRYSIRENGQLLT-ILSVEDSDDGIYCC--TANNG---VGGAVESCGALQ 96
Query: 220 -----DFGYVALDIELMLKTLVPFT-----------EWFVNNKPLPAGAKFKTTHDFGYV 263
++++++ W + L ++ G
Sbjct: 97 VKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLES-G-- 153
Query: 264 ALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
+L I ED+G Y A NS G+A +
Sbjct: 154 SLRIHNVQKEDAGQYRCVAKNSLGTAYSKLV 184
Score = 73.6 bits (181), Expect = 9e-15
Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 15/158 (9%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSG-TL 295
P W N + + + G + L I+ D GIY A N G A S L
Sbjct: 37 PEISWTRNKILIKLFDTRYSIRENGQL-LTILSVEDSDDGIYCCTANNGVGGAVESCGAL 95
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
+ + P + ++ + EG A + +G+ +V ++ + +
Sbjct: 96 QVKMK-------PKITRPPINVK-IIEGLKAVLPCT--TMGNPKPSVSWIKGDSALRENS 145
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
RI V G L I + ED G Y C A N G A
Sbjct: 146 RIA-VLESGS--LRIHNVQKEDAGQYRCVAKNSLGTAY 180
Score = 63.2 bits (154), Expect = 4e-11
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+P + W K L SRI G +L I++++ +D+ Y C A N LG A
Sbjct: 123 TTMGNPKPSVSWIKGDSALRENSRIAVLES-G--SLRIHNVQKEDAGQYRCVAKNSLGTA 179
Query: 62 VSTCT 66
S
Sbjct: 180 YSKLV 184
Score = 41.6 bits (98), Expect = 9e-04
Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTS-ASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
I V D G Y C A N G AV S +++V+ K I P ++ A L
Sbjct: 66 ILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRP---PINVKIIEGLKAVLP 121
Score = 40.5 bits (95), Expect = 0.002
Identities = 7/31 (22%), Positives = 13/31 (41%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+AP + PL+ + T C + P+
Sbjct: 6 KAPVITTPLETVDALVEEVATFMCAVESYPQ 36
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane,
phosphorylation, immunoglobulin domain, membrane,
glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Length = 192
Score = 134 bits (339), Expect = 7e-36
Identities = 36/204 (17%), Positives = 66/204 (32%), Gaps = 22/204 (10%)
Query: 1639 PPVFTKKIQP--CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
P + + A ++ F G P P I WFR I + + + + +
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTE 59
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
L +R + D G + A N+ G+ + A L V V P + +
Sbjct: 60 LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV----------FVQPHIIQLKNETTY-E 108
Query: 1757 GQLARFDAKISATKPLDVYWLKNGKKI-------IPDIRYKTLEEDNLFTLLIIEAVVED 1809
++ W + D R + + +L I + + D
Sbjct: 109 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSD 168
Query: 1810 SGAYECVAMNNAGEARCEAELVVQ 1833
SG Y+C A + G + L ++
Sbjct: 169 SGRYDCEAASRIGGHQKSMYLDIE 192
Score = 112 bits (281), Expect = 4e-28
Identities = 48/239 (20%), Positives = 68/239 (28%), Gaps = 59/239 (24%)
Query: 916 APEFLTT--PTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
P + T F CR + P + WF NGK + +
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT- 58
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L + ++ D G Y C+ATNK GE L V
Sbjct: 59 -ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV----------------------- 94
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 1093
P QL+ N E G+V C + +P I W
Sbjct: 95 -------------------QPHII-QLK-NETTYENGQVTLVCD--AEGEPIPEITWKRA 131
Query: 1094 GRPF-------ATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
F + R++ G SL + V DSG Y C A ++ G +
Sbjct: 132 VDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD 190
Score = 101 bits (254), Expect = 2e-24
Identities = 40/193 (20%), Positives = 63/193 (32%), Gaps = 26/193 (13%)
Query: 1562 APVFVS--QPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT- 1617
P + + GE F C R +G P P + W NG I + + T
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSC-RASGSPEPAISWFRNGKLIEENEKYILKGSNTEL 60
Query: 1618 -----EMEHKGKIQ---ERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEVEFD 1664
G EK A P + + +E Q + +
Sbjct: 61 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQL-KNETTYENGQVTLVCDAE 119
Query: 1665 GDPLPTIKWFREDFPITSSPD-------FQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 1717
G+P+P I W R T + ++ S L ++ V + DSG + A +R
Sbjct: 120 GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASR 179
Query: 1718 GGKAKCSANLVVE 1730
G + S L +E
Sbjct: 180 IGGHQKSMYLDIE 192
Score = 94.9 bits (236), Expect = 4e-22
Identities = 33/142 (23%), Positives = 50/142 (35%), Gaps = 22/142 (15%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
S +A G+ F + S + + W +NGK I + +Y + L
Sbjct: 4 AISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELT 61
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPL 1861
+ + D G Y C A N AGE +A L V P + +
Sbjct: 62 VRNIINSDGGPYVCRATNKAGEDEKQAFLQVF-------------------VQPHIIQL- 101
Query: 1862 KDQNVKEGSAVTLKCRITGKPR 1883
K++ E VTL C G+P
Sbjct: 102 KNETTYENGQVTLVCDAEGEPI 123
Score = 93.7 bits (233), Expect = 1e-21
Identities = 47/213 (22%), Positives = 70/213 (32%), Gaps = 42/213 (19%)
Query: 408 PPKFTSHIKSLE-GLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFG 465
P + KS + G+ F C + PE + WF NGK I + +
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSC---RASGSPEPAISWFRNGKLIEENEKYILKGSNT 58
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLD 515
+ + + + D G YVCRA N +F+ P I N
Sbjct: 59 --ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQP-------HIIQLK----NET 105
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF-------ATGSRVKTVYDFGFISLDMDY 568
E G+V C + +P I W F + R++ G SL +
Sbjct: 106 TYENGQVTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKD 163
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVICKVLTV 601
V DSG Y C A ++ G L +
Sbjct: 164 VKLSDSGRYDCEAASRIGGHQKSMY-----LDI 191
Score = 90.6 bits (225), Expect = 1e-20
Identities = 42/190 (22%), Positives = 62/190 (32%), Gaps = 23/190 (12%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P S+ Q N + GE F G + + NGK IE + + +
Sbjct: 3 PAISMP-QKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT- 58
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L + D G Y CRATNK G+ E L+ V P E +
Sbjct: 59 -ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ-V----FVQPHIIQ--LKNETTYENG 110
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPI-------FHKNRVKMVSDFGFVVMDIAYVQSHD 478
C +P ++ W R+++ G + I V+ D
Sbjct: 111 QVTLVCDAE--GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSD 168
Query: 479 SGEYVCRAWN 488
SG Y C A +
Sbjct: 169 SGRYDCEAAS 178
Score = 88.3 bits (219), Expect = 7e-20
Identities = 34/195 (17%), Positives = 56/195 (28%), Gaps = 49/195 (25%)
Query: 706 APVFTVPLSNID-DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
P ++P + + GE F R + P+ + WF NGK ++ ++
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNT- 58
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ------------------------ 800
L + + D G Y CRA N GE A ++V
Sbjct: 59 -ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCD 117
Query: 801 --------------GKRSIILESQLPKGMEVFISFHE------ISPVYPEDCGQYSCRAY 840
E + + I V D G+Y C A
Sbjct: 118 AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 177
Query: 841 NDYGEAVTSASMKVQ 855
+ G S + ++
Sbjct: 178 SRIGGHQKSMYLDIE 192
Score = 86.4 bits (214), Expect = 4e-19
Identities = 37/197 (18%), Positives = 52/197 (26%), Gaps = 44/197 (22%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P N ++ F CR P I WF NG+ +
Sbjct: 3 PAISM------PQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILK 54
Query: 557 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVE------------ 604
L + + D G Y+CRATNK G +A + V I++
Sbjct: 55 GSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQV 112
Query: 605 ---------------WFYNGKKLP-------HGHRYRTFHDFGIVILDILYCYEENSGVY 642
W R G L I +SG Y
Sbjct: 113 TLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 172
Query: 643 ECRATNKYGSDVTKASL 659
+C A ++ G L
Sbjct: 173 DCEAASRIGGHQKSMYL 189
Score = 85.6 bits (212), Expect = 8e-19
Identities = 34/178 (19%), Positives = 52/178 (29%), Gaps = 48/178 (26%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P K+ + E + F C+ G P + WF NGK + ++
Sbjct: 2 MPAISMPQKSFNATAERGEEMTFSCR--ASGSPEPAISWFRNGKLIEENEKYILKGSNTE 59
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+ + + D G Y+CRATN G DE +A L+ +P II
Sbjct: 60 LTVRN--IINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHII------------------ 99
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLING 1600
Q + + E G P P + W
Sbjct: 100 -------------------------QLKNETTYENGQVTLVCDAEGEPIPEITWKRAV 132
Score = 84.5 bits (209), Expect = 2e-18
Identities = 38/207 (18%), Positives = 57/207 (27%), Gaps = 65/207 (31%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P I WF+NG + + L++ ++ D Y C+ATN GE
Sbjct: 27 RASGSPEPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGED 84
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
L+ VF P I N+
Sbjct: 85 EKQAFLQ------------------------------------VFVQPHIIQLKNETT-Y 107
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI-------FHKNRV 174
EN V C E G +P ++ W R+
Sbjct: 108 ENGQVTLVCDAE---------G----------EPIPEITWKRAVDGFTFTEGDKSLDGRI 148
Query: 175 KMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
++ G + I V+ DSG Y C+
Sbjct: 149 EVKGQHGSSSLHIKDVKLSDSGRYDCE 175
Score = 84.1 bits (208), Expect = 2e-18
Identities = 35/205 (17%), Positives = 53/205 (25%), Gaps = 55/205 (26%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ WF NGK + +Y L + + G Y CRATNK G D +A L+
Sbjct: 36 ISWFRNGKLIEENEKYILKGSNTE--LTVRNIINSDGGPYVCRATNKAGEDEKQAFLQ-- 91
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ P + + E
Sbjct: 92 -----VFV-----------------------------------QPHIIQLKN--ETTYEN 109
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPM-------KTGSRFRTFCDFGFVILEISPVYPE 775
+P ++ W R G L I V
Sbjct: 110 GQVTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLS 167
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQ 800
D G+Y C A + G S + ++
Sbjct: 168 DSGRYDCEAASRIGGHQKSMYLDIE 192
Score = 83.3 bits (206), Expect = 4e-18
Identities = 34/173 (19%), Positives = 52/173 (30%), Gaps = 24/173 (13%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P WF N K + K+ L + D G Y +ATN G L
Sbjct: 33 EPAISWFRNGKLIEENEKYILKGSNT--ELTVRNIINSDGGPYVCRATNKAGEDEKQAFL 90
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEA 353
+ + P L N + E G+ + +
Sbjct: 91 QVFVQ-------P----HIIQLKNETTYENGQVTLVCD--AEGEPIPEITWKRAVDGFTF 137
Query: 354 SH-------RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ RI G L I K+ D+G Y C A ++ G + S+ L+
Sbjct: 138 TEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD 190
Score = 73.3 bits (180), Expect = 1e-14
Identities = 23/101 (22%), Positives = 33/101 (32%), Gaps = 10/101 (9%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL-------SAGSRIKTI 968
P + + T C +P + W S RI+
Sbjct: 95 QPHIIQLKNETTYENGQ-VTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVK 151
Query: 969 NDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
G L I DV L DSG Y C+A ++ G S L ++
Sbjct: 152 GQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE 192
Score = 73.3 bits (180), Expect = 1e-14
Identities = 37/212 (17%), Positives = 56/212 (26%), Gaps = 50/212 (23%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
+ + + E + F CR G PE + WF NGK
Sbjct: 4 AISMPQKSFNATAERGEEMTFSCRAS---------G----------SPEPAISWFRNGKL 44
Query: 168 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH-------D 220
I + + + + + + D G YVC NK AG K
Sbjct: 45 IEENEKYILKGSNT--ELTVRNIINSDGGPYVC--RATNK---AGEDEKQAFLQVFVQPH 97
Query: 221 F-----GYVALDIELMLKTLV-----PFTEWFVNNKPLP-------AGAKFKTTHDFGYV 263
+ ++ L P W + + G
Sbjct: 98 IIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSS 157
Query: 264 ALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+L I DSG Y +A + G S L
Sbjct: 158 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYL 189
Score = 67.9 bits (166), Expect = 1e-12
Identities = 31/183 (16%), Positives = 43/183 (23%), Gaps = 59/183 (32%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L + + D G YVCRA N GE +A + QV
Sbjct: 59 ELTVRNIINSDGGPYVCRATNKAGEDEKQAFL------------QV-------------- 92
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
P + + E C G+P ++
Sbjct: 93 ----------------------FVQPHIIQ--LKNETTYENGQVTLVCD--AEGEPIPEI 126
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-------VYPEDSGEYLCRATNLYGMDETR 1512
W + V G V DSG Y C A + G +
Sbjct: 127 TWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKS 186
Query: 1513 AIL 1515
L
Sbjct: 187 MYL 189
Score = 55.6 bits (134), Expect = 1e-08
Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 5 ADPNLKIEWFKNGVPL-------SLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNL 57
+P +I W + SL RI G +L I ++ DS Y C+A +
Sbjct: 120 GEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASR 179
Query: 58 LGEAVSTCTLKIE 70
+G + L IE
Sbjct: 180 IGGHQKSMYLDIE 192
Score = 45.6 bits (108), Expect = 4e-05
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 861
+ + D G Y CRA N GE A ++V + II
Sbjct: 61 TVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHII 99
Score = 42.9 bits (101), Expect = 3e-04
Identities = 20/112 (17%), Positives = 28/112 (25%), Gaps = 17/112 (15%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
P I ++++ T E V E P P + + F
Sbjct: 94 VQPHII-QLKNETTYENGQVTLVCDAEGEPI--PEIT------------WKRAVDGFTFT 138
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
G SL I V D G Y C A + G +
Sbjct: 139 EGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD 190
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex,
receptor tyrosine kinas binding, immunoglobulin domain,
kinase, membrane, nucleotid binding; HET: NAG; 2.10A
{Homo sapiens}
Length = 241
Score = 132 bits (334), Expect = 1e-34
Identities = 53/242 (21%), Positives = 80/242 (33%), Gaps = 34/242 (14%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQ-------ARFEVEFDGDPLPTIKWFREDFPITSSPDFQ- 1687
P +T+ P R ++ RF G+P P+I W +
Sbjct: 8 DTGAPYWTR---PERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGG 64
Query: 1688 IHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLT 1747
I + L+M V D G + + EN+ G + + L V E R P
Sbjct: 65 IKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLE-----RSPHRPILQAG 119
Query: 1748 TISSAVINVGQLARFDAKISATKPLDVYWLK----NGKKIIPDIR--------YKTLEED 1795
++ +G F K+ + + WLK NG K+ PD + + +
Sbjct: 120 LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVE 179
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAP 1855
L + D G Y C A N G A L V +A V DEA
Sbjct: 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA------EEELVEADEAG 233
Query: 1856 TV 1857
+V
Sbjct: 234 SV 235
Score = 115 bits (288), Expect = 1e-28
Identities = 53/247 (21%), Positives = 74/247 (29%), Gaps = 59/247 (23%)
Query: 916 APEFL----TTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI-ND 970
AP + L + + F C +P+ ++ W NG+ RI I
Sbjct: 11 APYWTRPERMDKKLLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIGGIKLR 68
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKN 1030
L + V D G YTC NK G + L V R
Sbjct: 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS------------------ 110
Query: 1031 IQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 1090
P+ P+ + L N V F C+ SD I W
Sbjct: 111 --------------------PHRPILQAGLPANQTAVLGSDVEFHCK--VYSDAQPHIQW 148
Query: 1091 FF-----------NGRPFATGSRVKTVYDF-GFISLDMDYVYARDSGEYICRATNKWGTA 1138
+G P+ T + + L + V RD GEY+CRATN G A
Sbjct: 149 LKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVA 208
Query: 1139 MTKAKVI 1145
+
Sbjct: 209 EKAFWLS 215
Score = 99.2 bits (247), Expect = 4e-23
Identities = 29/149 (19%), Positives = 47/149 (31%), Gaps = 19/149 (12%)
Query: 1740 VVPPSFL----TTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEED 1795
P + + RF + + WLKNG++ + R ++
Sbjct: 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLR 68
Query: 1796 NLFTLLIIEAVV-EDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEA 1854
+ L++E+VV D G Y CV N G R L V +
Sbjct: 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVL--------------ERSPHRP 114
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
A +Q GS V C++ +
Sbjct: 115 ILQAGLPANQTAVLGSDVEFHCKVYSDAQ 143
Score = 97.7 bits (243), Expect = 1e-22
Identities = 41/197 (20%), Positives = 67/197 (34%), Gaps = 28/197 (14%)
Query: 345 LYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
L NG+ HRI + L + D G YTC NK+G + L+ +++
Sbjct: 50 LKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLER 109
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH----NGKPIFHKNRVK 459
S +P + G F C +D + ++W NG +
Sbjct: 110 SPHRPILQAGLPANQT-AVLGSDVEFHC--KVYSDAQPHIQWLKHVEVNGSKVGPDGTPY 166
Query: 460 MVSDFGFVVMD--------IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRL----- 506
+ ++ +A V D GEY+CRA N L
Sbjct: 167 VTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFI-------GVAEKAFWLSVHGP 219
Query: 507 PSPSQDNLDVPEAGKVH 523
+ ++ ++ EAG VH
Sbjct: 220 RAAEEELVEADEAGSVH 236
Score = 95.8 bits (238), Expect = 7e-22
Identities = 38/242 (15%), Positives = 60/242 (24%), Gaps = 58/242 (23%)
Query: 1559 PKEAPVFVS----QPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITA 1613
AP + + V RF C G P P + WL NG E
Sbjct: 8 DTGAPYWTRPERMDKKLLAVPAANTVRFRC-PAAGNPTPSISWLKNGREFRGEHRIGGIK 66
Query: 1614 T---------ETTEMEHKG-------------------KIQERVVDASEKPAKPPVFTKK 1645
E+ +G + ER P +P +
Sbjct: 67 LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS------PHRPILQAGL 120
Query: 1646 IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFP------------ITSSPDFQIHTFST 1693
A F + D P I+W + +T + +
Sbjct: 121 PANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEA 180
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV 1753
L + V D G + A N G A+ + L V R + +
Sbjct: 181 DVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPR------AAEEELVEADEAGS 234
Query: 1754 IN 1755
++
Sbjct: 235 VH 236
Score = 94.6 bits (235), Expect = 2e-21
Identities = 48/225 (21%), Positives = 73/225 (32%), Gaps = 44/225 (19%)
Query: 407 QPPKFTSHIKSLEGL---KDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVS 462
P +T + + L ++ F C P +P + W NG+ ++R+ +
Sbjct: 10 GAPYWTRPERMDKKLLAVPAANTVRFRC---PAAGNPTPSISWLKNGREFRGEHRIGGIK 66
Query: 463 -DFGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPS 510
+ + V D G Y C N F + P + LP+
Sbjct: 67 LRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQ--AGLPA-- 122
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-----------NGRPFATGSRVKTVYDF 559
N V F C+ SD I W +G P+ T +
Sbjct: 123 --NQTAVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESV 178
Query: 560 -GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+ L + V RD GEY+CRATN G A L+V
Sbjct: 179 EADVRLRLANVSERDGGEYLCRATNFIGVAEKAFW-----LSVHG 218
Score = 87.7 bits (217), Expect = 4e-19
Identities = 31/198 (15%), Positives = 53/198 (26%), Gaps = 53/198 (26%)
Query: 1419 PEKKQPPRFV--TQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN 1475
P + ++ + V + +F C G+P + W NG+ ++R
Sbjct: 6 GVDTGAPYWTRPERMDKKLLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIG 63
Query: 1476 PIYDFGYVAMNFGW------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQL 1529
G + W V P D G Y C N +G L
Sbjct: 64 -----GIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD------------- 105
Query: 1530 PKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGY 1589
V + P + P Q G F +V
Sbjct: 106 ------------------------VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSD 141
Query: 1590 PRPRVMWLINGHTIVNEI 1607
+P + WL + +++
Sbjct: 142 AQPHIQWLKHVEVNGSKV 159
Score = 85.8 bits (212), Expect = 2e-18
Identities = 36/213 (16%), Positives = 58/213 (27%), Gaps = 63/213 (29%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRS-TFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+P I W KNG RI +L + S+ D YTC N G
Sbjct: 38 PAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGS 97
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
T TL + +R +P + +
Sbjct: 98 IRQTYTLDVLERS-----------------PHRP--------------ILQAGLPANQTA 126
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH----NGKPIFHKNRVKM 176
+V F C+V +D + ++W NG + +
Sbjct: 127 VLGSDVEFHCKVY-------------------SDAQPHIQWLKHVEVNGSKVGPDGTPYV 167
Query: 177 VSDFGFVVMD--------IAYVQSHDSGEYVCQ 201
++ +A V D GEY+C+
Sbjct: 168 TVLKSWISESVEADVRLRLANVSERDGGEYLCR 200
Score = 84.2 bits (208), Expect = 6e-18
Identities = 36/227 (15%), Positives = 63/227 (27%), Gaps = 70/227 (30%)
Query: 806 ILESQLPKGMEVFISFHE--ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE 863
G+++ + V P D G Y+C N +G +
Sbjct: 56 FRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT-------------- 101
Query: 864 SQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTP 923
L D +E + P
Sbjct: 102 --------------------------------YTL--------DVLERSPHRPILQAGLP 121
Query: 924 TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA-----GSRIKTINDFGFVI--- 975
+ T + F C+ +D ++W + + + G+ T+
Sbjct: 122 ANQTAVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVE 179
Query: 976 ----LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEP 1018
L + +V RD G Y C+ATN G A + L+V G + + E
Sbjct: 180 ADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAAEEEL 226
Score = 82.7 bits (204), Expect = 2e-17
Identities = 36/219 (16%), Positives = 66/219 (30%), Gaps = 59/219 (26%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFG----IVILDILYCYEENSGVYECRATNKYGSDVTKAS 658
+ W NG++ HR +V+ ++ + G Y C NK+GS +
Sbjct: 47 ISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVV---PSDRGNYTCVVENKFGSIRQTYT 103
Query: 659 LKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDD 718
L +LE + + +N
Sbjct: 104 LD-------VLER------------------------------SPHRPILQAGLPANQT- 125
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKP------------MKTGSRFRTFCDFGFVI 766
G + F + D + ++W + + + + + V
Sbjct: 126 AVLGSDVEFHCK--VYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVR 183
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
L ++ V D G+Y CRA N G A + + V G R+
Sbjct: 184 LRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPRAA 222
Score = 79.6 bits (196), Expect = 3e-16
Identities = 37/174 (21%), Positives = 53/174 (30%), Gaps = 14/174 (8%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTH-DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W N + + +L + D G YT N GS + TL
Sbjct: 45 PSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTL 104
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFE----ASLIPV-----GDQTMTVEFLY 346
LER H L + + + G F + P + +
Sbjct: 105 DVLER--SPHRPILQAGLPANQT-AVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGP 161
Query: 347 NGKPIEASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+G P + + V L + D G Y CRATN G AE + L
Sbjct: 162 DGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLS 215
Score = 76.1 bits (187), Expect = 4e-15
Identities = 44/209 (21%), Positives = 61/209 (29%), Gaps = 52/209 (24%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P + + L VP A V F C +PT I W NGR F R+ +
Sbjct: 12 PYWTRPERMDKK----LLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIGGI 65
Query: 557 Y-DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI-------------------- 595
SL M+ V D G Y C NK+G+ +
Sbjct: 66 KLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQT 125
Query: 596 ----------CKVL---TVIVEWFYNGKKLPH------------GHRYRTFHDFGIVILD 630
CKV ++W + + + + V L
Sbjct: 126 AVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLR 185
Query: 631 ILYCYEENSGVYECRATNKYGSDVTKASL 659
+ E + G Y CRATN G L
Sbjct: 186 LANVSERDGGEYLCRATNFIGVAEKAFWL 214
Score = 71.5 bits (175), Expect = 2e-13
Identities = 38/196 (19%), Positives = 52/196 (26%), Gaps = 58/196 (29%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
SL ++ V P D+G Y C N G T+
Sbjct: 73 SLVMESVVPSDRGNYTCVVENKFGSIRQTYTL---------------------------- 104
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
D+ E +P Q V +F C+ D +
Sbjct: 105 ---------------DVLERSPHRPILQAGLPANQ-TAVLGSDVEFHCK--VYSDAQPHI 146
Query: 1460 EWF-----------LNGKPLPHKNRFNPIYDF-GYVAMNFGWVYPEDSGEYLCRATNLYG 1507
+W +G P + V + V D GEYLCRATN G
Sbjct: 147 QWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIG 206
Query: 1508 MDETRAILKTTGKPGI 1523
+ E L G
Sbjct: 207 VAEKAFWLSVHGPRAA 222
Score = 66.9 bits (163), Expect = 5e-12
Identities = 24/122 (19%), Positives = 40/122 (32%), Gaps = 8/122 (6%)
Query: 702 EHRQAPVFTVPL---SNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT 758
AP +T P + + F +P + W NG+ + R
Sbjct: 7 VDTGAPYWTRPERMDKKLLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIGG 64
Query: 759 F-CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI--ILESQLPKGM 815
L + V P D G Y+C N +G + ++ V + IL++ LP
Sbjct: 65 IKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQ 124
Query: 816 EV 817
Sbjct: 125 TA 126
Score = 66.1 bits (161), Expect = 9e-12
Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 8/118 (6%)
Query: 1053 PPVFTSQLQD---NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-D 1108
P +T + L VP A V F C +PT I W NGR F R+ +
Sbjct: 11 APYWTRPERMDKKLLAVPAANTVRFRCP--AAGNPTPSISWLKNGREFRGEHRIGGIKLR 68
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKA--KVICKAKHDIVTESQLPDSMSA 1164
SL M+ V D G Y C NK+G+ V+ ++ H + ++ LP + +A
Sbjct: 69 HQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTA 126
Score = 65.0 bits (158), Expect = 3e-11
Identities = 37/237 (15%), Positives = 66/237 (27%), Gaps = 66/237 (27%)
Query: 101 EPELVFDS--PVFISHL----NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVND 154
+P+ D+ P + + V F C G +
Sbjct: 2 DPDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAA---------G----------N 42
Query: 155 PELKVEWFHNGKPIFHKNRVKMVS-DFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGA 213
P + W NG+ ++R+ + + + V D G Y C V NK G+
Sbjct: 43 PTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC--VVENK---FGS 97
Query: 214 KFKTTH------------DFGYVALDIELMLKTLVPFT-----------EWFVNNKPLPA 250
+T + + +L + V F +W + + +
Sbjct: 98 IRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGS 157
Query: 251 GAK------------FKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ + V L + D G Y +ATN G A + L
Sbjct: 158 KVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWL 214
Score = 54.9 bits (132), Expect = 6e-08
Identities = 23/122 (18%), Positives = 34/122 (27%), Gaps = 7/122 (5%)
Query: 1258 DEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAF 1317
+ P P + T V F +V D + + +N S
Sbjct: 108 ERSPHRPILQAGLPANQTAVLGSDVEFHCKV--YSDAQPHI-----QWLKHVEVNGSKVG 160
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
+ + V L + V D GEY+CRA N G A +S
Sbjct: 161 PDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAEKAFWLSVHGPR 220
Query: 1378 TI 1379
Sbjct: 221 AA 222
Score = 50.3 bits (120), Expect = 2e-06
Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 12/83 (14%)
Query: 2 EPRADPNLKIEWFK-----------NGVPLSLGSRIRSTFDF-GLVTLSINSLRADDSAI 49
+ +D I+W K +G P + + V L + ++ D
Sbjct: 137 KVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGE 196
Query: 50 YTCKATNLLGEAVSTCTLKIEDR 72
Y C+ATN +G A L +
Sbjct: 197 YLCRATNFIGVAEKAFWLSVHGP 219
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain,
immunoglobulin superfamily, transmembrane,
phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A
{Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Length = 389
Score = 134 bits (339), Expect = 1e-33
Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 22/212 (10%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD-------FQIHT 1690
+P + +++ +E Q + +G+P+P I W R T + ++
Sbjct: 1 QPHI--IQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG 58
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
S L ++ V + DSG + A +R G + S L +E P F++ +
Sbjct: 59 QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY----------APKFISNQT 108
Query: 1751 SAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD--IRYKTLEEDNLFTLLIIEAVVE 1808
G + + P ++W ++ + KT L I
Sbjct: 109 IYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDN 168
Query: 1809 DSGAYECVAMNNAGEARCEAELVVQSK-KAPG 1839
D G Y C A N+ G E L + +P
Sbjct: 169 DFGRYNCTATNHIGTRFQEYILALADVPSSPY 200
Score = 112 bits (281), Expect = 3e-26
Identities = 46/238 (19%), Positives = 68/238 (28%), Gaps = 57/238 (23%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL-------SAGSRIKTIN 969
P + T E+ C +P + W S RI+
Sbjct: 2 PHI-IQLKNETTYENGQVTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKG 58
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATK 1029
G L I DV L DSG Y C+A ++ G S L ++
Sbjct: 59 QHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE-------------------- 98
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRID 1089
P F S E ++ C + KS+P I
Sbjct: 99 ----------------------YAPKFISNQT-IYYSWEGNPINISC--DVKSNPPASIH 133
Query: 1090 WFFNGRPFATGS--RVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
W + + +KT + L++ D G Y C ATN GT + +
Sbjct: 134 WRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILA 191
Score = 96.8 bits (241), Expect = 4e-21
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 10/150 (6%)
Query: 343 EFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 402
F + RI G L I K+ D+G Y C A ++ G + S+ L+
Sbjct: 40 GFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEY 99
Query: 403 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN--RVKM 460
PKF S+ +G+ + C + ++P + W + + KN +K
Sbjct: 100 -----APKFISNQTIYY-SWEGNPINISCDVK--SNPPASIHWRRDKLVLPAKNTTNLKT 151
Query: 461 VSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
S ++++IA +D G Y C A N+
Sbjct: 152 YSTGRKMILEIAPTSDNDFGRYNCTATNHI 181
Score = 94.9 bits (236), Expect = 2e-20
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 26/195 (13%)
Query: 1563 PVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWL--INGHTIVNEIVRKITATETTEME 1620
P + Q + + E G P P + W ++G T E
Sbjct: 2 PHII-QLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH 60
Query: 1621 HKGKIQERVVDAS----------------EKPAK-----PPVFTKKIQPCRAFEQDQARF 1659
+ + V S +K P F ++E +
Sbjct: 61 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINI 120
Query: 1660 EVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST--KSILIMRQVFMEDSGVFAVIAENR 1717
+ +P +I W R+ + + + T+ST K IL + D G + A N
Sbjct: 121 SCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNH 180
Query: 1718 GGKAKCSANLVVEEK 1732
G L + +
Sbjct: 181 IGTRFQEYILALADV 195
Score = 94.5 bits (235), Expect = 3e-20
Identities = 36/209 (17%), Positives = 63/209 (30%), Gaps = 64/209 (30%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGS-------RIRSTFDFGLVTLSINSLRADDSAIYTCKA 54
+ +P +I W + + RI G +L I ++ DS Y C+A
Sbjct: 23 DAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEA 82
Query: 55 TNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISH 114
+ +G + L IE P FIS+
Sbjct: 83 ASRIGGHQKSMYLDIEYA------------------------------------PKFISN 106
Query: 115 LNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN-- 172
E ++ C V+ ++P + W + + KN
Sbjct: 107 QTIYYSWEGNPINISCDVK-------------------SNPPASIHWRRDKLVLPAKNTT 147
Query: 173 RVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+K S ++++IA +D G Y C
Sbjct: 148 NLKTYSTGRKMILEIAPTSDNDFGRYNCT 176
Score = 93.7 bits (233), Expect = 5e-20
Identities = 34/209 (16%), Positives = 55/209 (26%), Gaps = 54/209 (25%)
Query: 603 VEWFYNGKKLP-------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
+ W R G L I +SG Y+C A ++ G
Sbjct: 32 ITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQK 91
Query: 656 KASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSN 715
L + AP F +
Sbjct: 92 SMYLD-I-----------------------------------------EYAPKFISNQTI 109
Query: 716 IDDLREGENAHFEARLTPTDDPKLKVEWFWNGK--PMKTGSRFRTFCDFGFVILEISPVY 773
EG + + +P + W + P K + +T+ +ILEI+P
Sbjct: 110 YY-SWEGNPINISCDVKS--NPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTS 166
Query: 774 PEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
D G+Y+C A N G + +
Sbjct: 167 DNDFGRYNCTATNHIGTRFQEYILALADV 195
Score = 93.7 bits (233), Expect = 5e-20
Identities = 37/206 (17%), Positives = 58/206 (28%), Gaps = 63/206 (30%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
I V D G+Y C A + G K L+
Sbjct: 66 HIKDVKLSDSGRYDCEAASRI----------------------------GGHQKSMYLD- 96
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
IE AP+F++ T E + C +
Sbjct: 97 --------------------------IEY----APKFISNQTIYYSWEGNPINISCDVK- 125
Query: 943 TNDPSMTVEWFHNGKALSAGS--RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEA 1000
++P ++ W + L A + +KT + +ILEI D G Y C ATN G
Sbjct: 126 -SNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTR 184
Query: 1001 TTSCKLTVKGRQGIDVEPQVSAIFAN 1026
L + ++ +
Sbjct: 185 FQEYILALADVPSSPYGVKIIELSQT 210
Score = 87.6 bits (217), Expect = 5e-18
Identities = 31/163 (19%), Positives = 48/163 (29%), Gaps = 12/163 (7%)
Query: 243 VNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLF 302
+ + G +L I DSG Y +A + G S L
Sbjct: 43 FTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYA-- 100
Query: 303 VNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTV 360
P F EG + + + ++ + + + A ++T
Sbjct: 101 -----PKFISNQTIYY-SWEGNPINISCDV--KSNPPASIHWRRDKLVLPAKNTTNLKTY 152
Query: 361 HAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
++LEI T D G Y C ATN G L D
Sbjct: 153 STGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADV 195
Score = 86.8 bits (215), Expect = 1e-17
Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 39/185 (21%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF-------ATGSRVKTVYDFGFISLD 565
N E G+V C + + +P I W F + R++ G SL
Sbjct: 9 NETTYENGQVTLVC--DAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLH 66
Query: 566 MDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI----------------------- 602
+ V DSG Y C A ++ G + +
Sbjct: 67 IKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKS 126
Query: 603 -----VEWFYNGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
+ W + LP + +T+ +IL+I + + G Y C ATN G+
Sbjct: 127 NPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQ 186
Query: 656 KASLK 660
+ L
Sbjct: 187 EYILA 191
Score = 85.2 bits (211), Expect = 3e-17
Identities = 20/147 (13%), Positives = 39/147 (26%), Gaps = 27/147 (18%)
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKII-------PDIRYKTLEED 1795
P + + ++ W + D R + +
Sbjct: 2 PHIIQLKNETTY-ENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQH 60
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAP 1855
+L I + + DSG Y+C A + G + L ++ AP
Sbjct: 61 GSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIE-------------------YAP 101
Query: 1856 TVAEPLKDQNVKEGSAVTLKCRITGKP 1882
EG+ + + C + P
Sbjct: 102 KFISNQTIYYSWEGNPINISCDVKSNP 128
Score = 80.2 bits (198), Expect = 1e-15
Identities = 31/185 (16%), Positives = 44/185 (23%), Gaps = 53/185 (28%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
SL I V D G Y C A + G + +
Sbjct: 64 SLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD------------I-------------- 97
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
+ P+F++ E C + +P +
Sbjct: 98 ----------------------EYAPKFISNQTIYY-SWEGNPINISCDV--KSNPPASI 132
Query: 1460 EWFLNGKPLPHKN--RFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKT 1517
W + LP KN + + D G Y C ATN G IL
Sbjct: 133 HWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILAL 192
Query: 1518 TGKPG 1522
P
Sbjct: 193 ADVPS 197
Score = 77.2 bits (190), Expect = 1e-14
Identities = 28/184 (15%), Positives = 44/184 (23%), Gaps = 49/184 (26%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPM-------KTGSRFRTFCDFGFVILEISPVY 773
E +P ++ W R G L I V
Sbjct: 14 ENGQVTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVK 71
Query: 774 PEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGMEVFIS---------- 820
D G+Y C A + G S + ++ I +G + IS
Sbjct: 72 LSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPAS 131
Query: 821 ---FHE------------------------ISPVYPEDCGQYSCRAYNDYGEAVTSASMK 853
+ I+P D G+Y+C A N G +
Sbjct: 132 IHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILA 191
Query: 854 VQGK 857
+
Sbjct: 192 LADV 195
Score = 74.8 bits (184), Expect = 6e-14
Identities = 28/200 (14%), Positives = 48/200 (24%), Gaps = 55/200 (27%)
Query: 1425 PRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLP-------HKNRFNP 1476
P + + +++ C G+P ++ W R
Sbjct: 2 PHII---QLKNETTYENGQVTLVCD--AEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEV 56
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSI 1536
G +++ V DSG Y C A + G + L
Sbjct: 57 KGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLD-------------------- 96
Query: 1537 EKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMW 1596
+E AP F+S EG P V P + W
Sbjct: 97 -----------------IEY-----APKFISNQTIYYSWEGNPINISCDVKSNPPASIHW 134
Query: 1597 LINGHTIVNEIVRKITATET 1616
+ + + + T
Sbjct: 135 RRDKLVLPAKNTTNLKTYST 154
Score = 69.1 bits (169), Expect = 5e-12
Identities = 40/212 (18%), Positives = 59/212 (27%), Gaps = 46/212 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P I L + EN V C E G +P ++ W
Sbjct: 2 PHII-QLKNETTYENGQVTLVCDAE---------G----------EPIPEITWKRAVDGF 41
Query: 169 -------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGA-------- 213
R+++ G + I V+ DSG Y C+ ++
Sbjct: 42 TFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE--AASRIGGHQKSMYLDIEY 99
Query: 214 --KFKTTHDFGYVALDIELMLKTLV-----PFTEWFVNNKPLPAG--AKFKTTHDFGYVA 264
KF + Y + + V W + LPA KT +
Sbjct: 100 APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMI 159
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
L+I D G Y ATN G+ L
Sbjct: 160 LEIAPTSDNDFGRYNCTATNHIGTRFQEYILA 191
Score = 67.9 bits (166), Expect = 1e-11
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 5 ADPNLKIEWFKNGVPLSLGS--RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
++P I W ++ + L + +++ + L I +D Y C ATN +G
Sbjct: 126 SNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRF 185
Query: 63 STCTLKIEDR 72
L + D
Sbjct: 186 QEYILALADV 195
Score = 40.6 bits (95), Expect = 0.005
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 17/110 (15%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
E P+FI+ E P+ + + +P + +T ++
Sbjct: 98 EYAPKFISNQTIYYSWEGNPINIS--CDVKSNPPASIHWRRDKLVLPA--KNTTNLKTYS 153
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
+ L+I D G Y C A N G F + +
Sbjct: 154 -------------TGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYIL 190
Score = 35.2 bits (81), Expect = 0.21
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + K++ E VTL C G+P
Sbjct: 2 PHIIQL-KNETTYENGQVTLVCDAEGEPI 29
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell
adhesion, transmembrane, disulfide bond, alternative
splicing; HET: NAG; 1.95A {Rattus norvegicus}
Length = 190
Score = 126 bits (318), Expect = 4e-33
Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 24/203 (11%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQIHTFSTKSI 1696
P + + W + +T++ ++
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTAT-----RKNASNME 57
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
+ + EDSG + + + K +A + V+ P S N
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVK----------AAPDITGHKRSENKNE 106
Query: 1757 GQLARFDAKISATKPLDVYWLKNGKKIIPDI-----RYKTLEEDNLFTLLIIEAVV-EDS 1810
GQ A K + W K + +I R+ + ++N L I+ + ED
Sbjct: 107 GQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDP 166
Query: 1811 GAYECVAMNNAGEARCEAELVVQ 1833
G YEC A N+ G A L V+
Sbjct: 167 GEYECNATNSIGSASVSTVLRVR 189
Score = 109 bits (274), Expect = 4e-27
Identities = 38/235 (16%), Positives = 61/235 (25%), Gaps = 57/235 (24%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P +T+ + +C LT ++ M W NG L+A + +
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNM-----E 57
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
IN DSG Y C + + + VK
Sbjct: 58 YRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKA------------------------- 91
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
P T + + E C+ P W
Sbjct: 92 -----------------APDITGHKRS-ENKNEGQDAMMYCKSV--GYPHPEWMWRKKEN 131
Query: 1096 PF-----ATGSRVKTVYDFGFISLD-MDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ R + + L+ ++ D GEY C ATN G+A +
Sbjct: 132 GVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVL 186
Score = 103 bits (258), Expect = 4e-25
Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 27/144 (18%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKP--LDVYWLKNGKKIIPDIRYKTLEEDNLF 1798
P +T+ + + ++++ + YW KNG ++ + +
Sbjct: 2 NEPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK-----NASNM 56
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
I + EDSG Y CV + + A + V+ AP +
Sbjct: 57 EYRINKPRAEDSGEYHCVY-HFVSAPKANATIEVK-------------------AAPDIT 96
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKP 1882
+ +N EG + C+ G P
Sbjct: 97 GHKRSENKNEGQDAMMYCKSVGYP 120
Score = 99 bits (249), Expect = 8e-24
Identities = 34/188 (18%), Positives = 49/188 (26%), Gaps = 18/188 (9%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRV--MWLINGHTIVNEIVRKITAT--- 1614
+ P V+ E P +T + W NG +
Sbjct: 1 QNEPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRI 60
Query: 1615 ETTEMEHKGKIQERVVDASEKPAK-------PPVFTKKIQPCRAFEQDQARFEVEFDGDP 1667
E G+ S A P T + E A + G P
Sbjct: 61 NKPRAEDSGEYHCVYHFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYP 120
Query: 1668 LPTIKWFREDFPITSSPD-----FQIHTFSTKSIL-IMRQVFMEDSGVFAVIAENRGGKA 1721
P W +++ + F I + L I+ ED G + A N G A
Sbjct: 121 HPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSA 180
Query: 1722 KCSANLVV 1729
S L V
Sbjct: 181 SVSTVLRV 188
Score = 94.5 bits (235), Expect = 5e-22
Identities = 37/212 (17%), Positives = 61/212 (28%), Gaps = 40/212 (18%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P+ + + + +C LT + + W NG + K S+ +
Sbjct: 3 EPRIVTSEEVIIRDS-LLPVTLQCNLTSSSHTLMYSYWTKNGVEL--TATRKNASNMEYR 59
Query: 468 VMDIAYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVP 517
I ++ DSGEY C + + P H + +
Sbjct: 60 ---INKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPD--ITGH----KR----SENKN 105
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWFFNGRPF-----ATGSRVKTVYDFGFISLD-MDYVYA 571
E C+ P W + R + + L+ ++
Sbjct: 106 EGQDAMMYCKSV--GYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQIT 163
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
D GEY C ATN G+A L V V
Sbjct: 164 EDPGEYECNATNSIGSASVSTV-----LRVRV 190
Score = 89.1 bits (221), Expect = 4e-20
Identities = 33/174 (18%), Positives = 57/174 (32%), Gaps = 20/174 (11%)
Query: 321 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 380
+ +L M + NG + A+ + + I + ED+G
Sbjct: 16 DSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNM-----EYRINKPRAEDSGE 70
Query: 381 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE 440
Y C + + + +E V P T H +S +G A C P
Sbjct: 71 YHCVY-HFVSAPKANATIE-VK----AAPDITGHKRSEN-KNEGQDAMMYCKSV--GYPH 121
Query: 441 LKVEWFHNGKPIFH-----KNRVKMVSDFGFVVMDIAYVQS-HDSGEYVCRAWN 488
+ W +F R +++ + ++I +Q D GEY C A N
Sbjct: 122 PEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATN 175
Score = 85.7 bits (212), Expect = 7e-19
Identities = 35/188 (18%), Positives = 51/188 (27%), Gaps = 49/188 (26%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
+ PR VT + + +C L M W NG L + +
Sbjct: 1 QNEPRIVTSEEVIIRDSL-LPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK--NASNME 57
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
Y EDSGEY C + + A ++
Sbjct: 58 YRINK---PRAEDSGEYHCVYHFV-SAPKANATIE------------------------- 88
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGH 1601
V K AP ++ EG+ A + GYP P MW +
Sbjct: 89 ------------V-----KAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKEN 131
Query: 1602 TIVNEIVR 1609
+ EI
Sbjct: 132 GVFEEISN 139
Score = 80.3 bits (198), Expect = 4e-17
Identities = 33/207 (15%), Positives = 56/207 (27%), Gaps = 67/207 (32%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ + + W KNGV L+ + S IN RA+DS Y C +
Sbjct: 27 LTSSSHTLMYSYWTKNGVELTATRKNASNM-----EYRINKPRAEDSGEYHCVYHF-VSA 80
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
+ T++ V +P H
Sbjct: 81 PKANATIE------------------------------------VKAAPDITGHKRSENK 104
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH-----KNRVK 175
E ++ C+ G P + W +F R
Sbjct: 105 NEGQDAMMYCKSV---------G----------YPHPEWMWRKKENGVFEEISNSSGRFF 145
Query: 176 MVSDFGFVVMDIAYVQS-HDSGEYVCQ 201
+++ + ++I +Q D GEY C
Sbjct: 146 IINKENYTELNIVNLQITEDPGEYECN 172
Score = 79.5 bits (196), Expect = 9e-17
Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 51/196 (26%)
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
+ P I + LT + + W NG + + +
Sbjct: 1 QNEPRIVTSEEVII-RDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRK-----NAS 54
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII--LESQ-LPKGMEVFI- 819
+ I+ ED G+Y C + +A+++V+ I S+ +G + +
Sbjct: 55 NMEYRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMY 113
Query: 820 ----------------------------------------SFHEISPVYPEDCGQYSCRA 839
+ ++ ED G+Y C A
Sbjct: 114 CKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNA 173
Query: 840 YNDYGEAVTSASMKVQ 855
N G A S ++V+
Sbjct: 174 TNSIGSASVSTVLRVR 189
Score = 78.4 bits (193), Expect = 2e-16
Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 8/100 (8%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALS-----AGSRIKTIND 970
AP+ E A C+ P W + + R IN
Sbjct: 92 APDITGHKRSENKNEGQDAMMYCKSV--GYPHPEWMWRKKENGVFEEISNSSGRFFIINK 149
Query: 971 FGFVILEINDVYLR-DSGLYTCKATNKHGEATTSCKLTVK 1009
+ L I ++ + D G Y C ATN G A+ S L V+
Sbjct: 150 ENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLRVR 189
Score = 77.6 bits (191), Expect = 4e-16
Identities = 34/186 (18%), Positives = 51/186 (27%), Gaps = 40/186 (21%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
S++ + V C L S M W NG + + ++
Sbjct: 8 TSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNM-----EYRINK 62
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVI-------------------------CKVL---T 600
A DSGEY C + A + CK +
Sbjct: 63 PRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPH 121
Query: 601 VIVEWFYNGKKLPHGH-----RYRTFHDFGIVILDILY-CYEENSGVYECRATNKYGSDV 654
W + R+ + L+I+ E+ G YEC ATN GS
Sbjct: 122 PEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSAS 181
Query: 655 TKASLK 660
L+
Sbjct: 182 VSTVLR 187
Score = 74.1 bits (182), Expect = 7e-15
Identities = 35/204 (17%), Positives = 59/204 (28%), Gaps = 57/204 (27%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
W NG +L + + I E+SG Y C + + A+++ V
Sbjct: 37 SYWTKNGVELTATRKNASNM-----EYRINKPRAEDSGEYHCVY-HFVSAPKANATIE-V 89
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ AP T + + EG
Sbjct: 90 -----------------------------------------KAAPDITGHKRSEN-KNEG 107
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPM-----KTGSRFRTFCDFGFVILEISPV-YPED 776
++A + P + W + + RF + L I + ED
Sbjct: 108 QDAMMYCKSV--GYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITED 165
Query: 777 CGQYSCRAYNDYGEAVTSASMKVQ 800
G+Y C A N G A S ++V+
Sbjct: 166 PGEYECNATNSIGSASVSTVLRVR 189
Score = 72.6 bits (178), Expect = 2e-14
Identities = 35/167 (20%), Positives = 53/167 (31%), Gaps = 26/167 (15%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER 300
W N L A K + I AEDSG Y + + + T++
Sbjct: 39 WTKNGVELTATRKNASNM-----EYRINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAA 92
Query: 301 LFVNHNYPLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASH--- 355
P + + N +EG+ A + G + +
Sbjct: 93 -------PDITGHKRSE-NKNEGQDAMMYCKSV----GYPHPEWMWRKKENGVFEEISNS 140
Query: 356 --RIRTVHAFGMVVLEILGTKI-EDTGVYTCRATNKWGQAEISVNLE 399
R ++ L I+ +I ED G Y C ATN G A +S L
Sbjct: 141 SGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIGSASVSTVLR 187
Score = 71.4 bits (175), Expect = 6e-14
Identities = 41/265 (15%), Positives = 60/265 (22%), Gaps = 92/265 (34%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPR-----LRVECSLSTAFFFPFINISTAFL 1318
PR +T E + PV + + + L+
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTA-------------- 48
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
+ I+ ED GEY C + ATI
Sbjct: 49 -----------TRKNASNM--EYRINKPRAEDSGEYHCVY-HFVSAPKANATI------- 87
Query: 1379 IQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV 1438
+V K P + +
Sbjct: 88 -----EV------------------------------------KAAPDITGHK--RSENK 104
Query: 1439 EMQST-KFECQLAPVGDPNMKVEWFLNGKPLPH-----KNRFNPIYDFGYVAMN-FGWVY 1491
C+ VG P+ + W + RF I Y +N
Sbjct: 105 NEGQDAMMYCKS--VGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQI 162
Query: 1492 PEDSGEYLCRATNLYGMDETRAILK 1516
ED GEY C ATN G +L+
Sbjct: 163 TEDPGEYECNATNSIGSASVSTVLR 187
Score = 70.3 bits (172), Expect = 1e-13
Identities = 37/208 (17%), Positives = 55/208 (26%), Gaps = 44/208 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P ++ + V C + S + W NG +
Sbjct: 4 PRIVTSEEVIIRDSLLPVTLQCNLTSSSH-----------------TLMYSYWTKNGVEL 46
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH---DFGYVA 225
K S+ + I ++ DSGEY C + P D
Sbjct: 47 --TATRKNASNMEYR---INKPRAEDSGEYHCV--YHFVSAPKANATIEVKAAPDITGHK 99
Query: 226 LDIELMLKTLVPFT-----------EWFVNNKPLP-----AGAKFKTTHDFGYVALDIVG 269
W + + +F + Y L+IV
Sbjct: 100 RSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVN 159
Query: 270 -AYAEDSGIYTVKATNSKGSATTSGTLK 296
ED G Y ATNS GSA+ S L+
Sbjct: 160 LQITEDPGEYECNATNSIGSASVSTVLR 187
Score = 51.4 bits (123), Expect = 4e-07
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 6 DPNLKIEWFKNGVPLS-----LGSRIRSTFDFGLVTLSINSLR-ADDSAIYTCKATNLLG 59
P+ + W K + R L+I +L+ +D Y C ATN +G
Sbjct: 119 YPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIG 178
Query: 60 EAVSTCTLKI 69
A + L++
Sbjct: 179 SASVSTVLRV 188
Score = 44.8 bits (106), Expect = 6e-05
Identities = 24/120 (20%), Positives = 34/120 (28%), Gaps = 31/120 (25%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----DPRLRVECSLSTAFFFPFIN 1312
+ P S E + + P + + E S S+ FF
Sbjct: 90 KAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFF---- 145
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+I +L V+L I ED GEY C A N G A +
Sbjct: 146 --------------IINKENYTELNIVNLQI----TEDPGEYECNATNSIGSASVSTVLR 187
Score = 39.1 bits (91), Expect = 0.006
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEG 872
I+ ED G+Y C + +A+++V+ I + EG
Sbjct: 59 RINKPRAEDSGEYHCVY-HFVSAPKANATIEVKAAPDITGHKRSENKNEG 107
Score = 37.5 bits (87), Expect = 0.019
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + VTL+C +T
Sbjct: 3 EPRIVTSEEVIIRDSLLPVTLQCNLTSSSH 32
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1,
isoform 2; hydrolase, immunoglobulin domain, nucleus,
protease; 2.80A {Homo sapiens}
Length = 218
Score = 125 bits (315), Expect = 2e-32
Identities = 29/237 (12%), Positives = 59/237 (24%), Gaps = 26/237 (10%)
Query: 1623 GKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS 1682
G +S + T + + G P +WF+ + I +
Sbjct: 2 GSSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPN 61
Query: 1683 SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGV- 1740
S LI V ++D+G + N + L V + + + V
Sbjct: 62 GNT---------SELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVD 112
Query: 1741 ----VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDN 1796
+S + G + W KN + + +
Sbjct: 113 GVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK------- 165
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDE 1853
++ +E G Y C N+ + ++ D+
Sbjct: 166 --LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII--DELNNLGHPDNKEQTTDQ 218
Score = 112 bits (282), Expect = 7e-28
Identities = 35/244 (14%), Positives = 61/244 (25%), Gaps = 51/244 (20%)
Query: 900 GYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL 959
G H + + + P + CR T P + +WF K +
Sbjct: 2 GSSHHHHHHSSGLVPRGSKITVNPESKAVLAGQFVKLCCR--ATGHPFVQYQWFKMNKEI 59
Query: 960 SAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVKGRQGIDVEP 1018
G+ L N V+++D+G Y C+ N + +L V
Sbjct: 60 PNGNTS---------ELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVC--------- 101
Query: 1019 QVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRL 1078
+ + D + + + + C
Sbjct: 102 ------------------DIPESFQRSVDGVSESKLQICVEPTS-QKLMPGSTLVLQCV- 141
Query: 1079 EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
P WF N P ++ + YV G Y C N +
Sbjct: 142 -AVGSPIPHYQWFKNELPLTHETKK---------LYMVPYVDLEHQGTYWCHVYNDRDSQ 191
Query: 1139 MTKA 1142
+K
Sbjct: 192 DSKK 195
Score = 99.6 bits (248), Expect = 2e-23
Identities = 28/223 (12%), Positives = 60/223 (26%), Gaps = 42/223 (18%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE-----IVRKITA 1613
PE++ V G+ + C R TG+P + W I N I +
Sbjct: 15 VPRGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHV 74
Query: 1614 ------------------TETTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQD 1655
++ ++++ + + +
Sbjct: 75 KDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGS 134
Query: 1656 QARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 1715
+ G P+P +WF+ + P+T TK + ++ V +E G +
Sbjct: 135 TLVLQCVAVGSPIPHYQWFKNELPLTH---------ETKKLYMVPYVDLEHQGTYWCHVY 185
Query: 1716 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 1758
N ++ + + L + Q
Sbjct: 186 NDRDSQDSKKVEII----------IDELNNLGHPDNKEQTTDQ 218
Score = 92.6 bits (230), Expect = 5e-21
Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 14/144 (9%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
S + GQ + + + + W K K+I N L
Sbjct: 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEI---------PNGNTSEL 67
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAE 1859
+ V+D+G Y C NN ++L V +++ + +
Sbjct: 68 IFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG----VSESKLQICV 123
Query: 1860 PLKDQNVKEGSAVTLKCRITGKPR 1883
Q + GS + L+C G P
Sbjct: 124 EPTSQKLMPGSTLVLQCVAVGSPI 147
Score = 92.3 bits (229), Expect = 6e-21
Identities = 39/202 (19%), Positives = 59/202 (29%), Gaps = 39/202 (19%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+ K T + +S L G C T P ++ +WF K I + N +++
Sbjct: 17 RGSKITVNPESKAVLA-GQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGNTSELI----- 68
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQ---- 511
V D+G YVCR NNF + P S Q
Sbjct: 69 ----FNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVE 124
Query: 512 -DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
+ + + C P WF N P ++ + YV
Sbjct: 125 PTSQKLMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHETKK---------LYMVPYVD 173
Query: 571 ARDSGEYICRATNKWGTAMTKA 592
G Y C N + +K
Sbjct: 174 LEHQGTYWCHVYNDRDSQDSKK 195
Score = 91.9 bits (228), Expect = 9e-21
Identities = 29/203 (14%), Positives = 52/203 (25%), Gaps = 61/203 (30%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P ++ +WFK + G+ L N++ D+ Y C+ N S
Sbjct: 45 HPFVQYQWFKMNKEIPNGNTS---------ELIFNAVHVKDAGFYVCRVNNNFTFEFSQW 95
Query: 66 -TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
L + + P+ ++ + +
Sbjct: 96 SQLDV---------------------CDIPESFQRSVDGVSESKLQICVEPTSQKLMPGS 134
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
+ C G P +WF N P+ H+ + +
Sbjct: 135 TLVLQCVAV---------GS----------PIPHYQWFKNELPLTHETKKLYM------- 168
Query: 185 MDIAYVQSHDSGEYVCQWFVNNK 207
+ YV G Y C V N
Sbjct: 169 --VPYVDLEHQGTYWC--HVYND 187
Score = 90.7 bits (225), Expect = 2e-20
Identities = 33/186 (17%), Positives = 59/186 (31%), Gaps = 42/186 (22%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
+ + + + V Q K C+ G P ++ +WF K +P+ N
Sbjct: 17 RGSKITVN--PESKAVLAGQFVKLCCR--ATGHPFVQYQWFKMNKEIPNGNTS------- 65
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKSIEKIR 1540
+ F V+ +D+G Y+CR N + + ++ + L P
Sbjct: 66 --ELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESF---------------- 107
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLING 1600
Q D + +P +QK+ G G P P W N
Sbjct: 108 -----------QRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE 156
Query: 1601 HTIVNE 1606
+ +E
Sbjct: 157 LPLTHE 162
Score = 86.5 bits (214), Expect = 6e-19
Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 55/226 (24%)
Query: 596 CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
C+ V +WF K++P+G+ L + +++G Y CR N +
Sbjct: 40 CRATGHPFVQYQWFKMNKEIPNGNTSE---------LIFNAVHVKDAGFYVCRVNNNFTF 90
Query: 653 DVTK-ASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTV 711
+ ++ + L V +PE + + D V
Sbjct: 91 EFSQWSQLD-VC--------DIPESFQ------------------RSVDGVSESKLQICV 123
Query: 712 PLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISP 771
++ L G + P +WF N P+ ++ + +
Sbjct: 124 EPTSQK-LMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHETK---------KLYMVPY 171
Query: 772 VYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEV 817
V E G Y C YND + + + + + P E
Sbjct: 172 VDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGH---PDNKEQ 214
Score = 86.1 bits (213), Expect = 1e-18
Identities = 23/187 (12%), Positives = 45/187 (24%), Gaps = 56/187 (29%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTS-ASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
+ V+ +D G Y CR N++ + + + V
Sbjct: 68 IFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIP----------------------- 104
Query: 882 GYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLT 941
+ ++ + PT L + +C
Sbjct: 105 ---------------------ESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCV-- 141
Query: 942 PTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEAT 1001
P +WF N L+ ++ + + V L G Y C N
Sbjct: 142 AVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQD 192
Query: 1002 TSCKLTV 1008
+ +
Sbjct: 193 SKKVEII 199
Score = 80.7 bits (199), Expect = 6e-17
Identities = 37/272 (13%), Positives = 69/272 (25%), Gaps = 86/272 (31%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFI----NI 1313
+ + ES V + V+ R P
Sbjct: 14 LVPRGSKITVNPESKAVLAGQFVKLCCRATGHPF-----------------VQYQWFKM- 55
Query: 1314 STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISC 1373
+ I + L + V+ +D G YVCR N+ F++
Sbjct: 56 ----------------NKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQ----- 94
Query: 1374 KKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKT 1433
QL + + + + + +
Sbjct: 95 ----WSQLDVCDIPESFQRSV-----------------------DGVSESKLQICVEPTS 127
Query: 1434 QDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN-PIYDFGYVAMNFGWVYP 1492
Q +L+ + +C VG P +WF N PL H+ + + V
Sbjct: 128 Q-KLMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHETKKLYMVPY----------VDL 174
Query: 1493 EDSGEYLCRATNLYGMDETRAILKTTGKPGII 1524
E G Y C N +++ + + +
Sbjct: 175 EHQGTYWCHVYNDRDSQDSKKVEIIIDELNNL 206
Score = 76.5 bits (188), Expect = 2e-15
Identities = 32/227 (14%), Positives = 59/227 (25%), Gaps = 60/227 (26%)
Query: 694 RRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG 753
+ + TV + + G+ R T P ++ +WF K + G
Sbjct: 6 HHHHHSSGLVPRGSKITVNPESKA-VLAGQFVKLCCR--ATGHPFVQYQWFKMNKEIPNG 62
Query: 754 SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTS-ASMKVQGKRSIILE---- 808
+ L + V+ +D G Y CR N++ + + + V
Sbjct: 63 NTSE---------LIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113
Query: 809 --------SQLPKGMEVFI--------------------------------SFHEISPVY 828
P ++ + + V
Sbjct: 114 VSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKKLYMVPYVD 173
Query: 829 PEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTID 875
E G Y C YND + + + + + P E T D
Sbjct: 174 LEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGH---PDNKEQTTD 217
Score = 76.1 bits (187), Expect = 3e-15
Identities = 25/188 (13%), Positives = 48/188 (25%), Gaps = 35/188 (18%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT- 294
+WF NK +P G T L + +D+G Y + N+ + +
Sbjct: 47 FVQYQWFKMNKEIPNG----NTS-----ELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQ 97
Query: 295 --------LKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLY 346
V+ + ++ L G + VG ++
Sbjct: 98 LDVCDIPESFQRSVDGVSESKLQICVEPTSQK-LMPGSTLVLQCV--AVGSPIPHYQWFK 154
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG 406
N P+ + + + +E G Y C N + +
Sbjct: 155 NELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIII----- 200
Query: 407 QPPKFTSH 414
H
Sbjct: 201 DELNNLGH 208
Score = 69.5 bits (170), Expect = 4e-13
Identities = 34/231 (14%), Positives = 60/231 (25%), Gaps = 72/231 (31%)
Query: 493 IPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR 552
+P + P + V V CR P ++ WF + G+
Sbjct: 15 VPRGSKITVN------PE--SKAVLAGQFVKLCCRAT--GHPFVQYQWFKMNKEIPNGNT 64
Query: 553 VKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK--------------------- 591
L + V+ +D+G Y+CR N + ++
Sbjct: 65 ---------SELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVS 115
Query: 592 --------------------AKVICKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVI 628
+ C + +WF N L H + +
Sbjct: 116 ESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETKK---------L 166
Query: 629 LDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEG 679
+ Y E+ G Y C N S +K + + N + E
Sbjct: 167 YMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDELNNLGHPDNKEQTTD 217
Score = 64.5 bits (157), Expect = 2e-11
Identities = 35/223 (15%), Positives = 55/223 (24%), Gaps = 70/223 (31%)
Query: 104 LVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
LV + + V CR G P ++ +WF
Sbjct: 14 LVPRGSKITVNPESKAVLAGQFVKLCCRAT---------G----------HPFVQYQWFK 54
Query: 164 NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK-------------PLP 210
K I + N +++ V D+G YVC+ VNN
Sbjct: 55 MNKEIPNGNTSELI---------FNAVHVKDAGFYVCR--VNNNFTFEFSQWSQLDVCDI 103
Query: 211 AGAKFKTTHDFGYVALDIELMLKTLV------------------PFTEWFVNNKPLPAGA 252
+ ++ L I + + P +WF N PL
Sbjct: 104 PESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET 163
Query: 253 KFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
K + E G Y N + S +
Sbjct: 164 KKL---------YMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 197
Score = 57.2 bits (138), Expect = 7e-09
Identities = 11/66 (16%), Positives = 19/66 (28%), Gaps = 9/66 (13%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P +WFKN +PL+ ++ + + + Y C N
Sbjct: 141 VAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQ 191
Query: 62 VSTCTL 67
S
Sbjct: 192 DSKKVE 197
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo
sapiens}
Length = 103
Score = 119 bits (300), Expect = 1e-31
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 912 DLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF 971
L AP + F + + P+ V+W+HNG L S+I N
Sbjct: 4 TLDHAPRITLRMRSHRVPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTS 61
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
G + LEI D + DSG Y TN GEA+ L V G
Sbjct: 62 GVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTG 100
Score = 106 bits (267), Expect = 2e-27
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
AP T+ + + + G+N F + P +V+W+ NG ++ S+ G
Sbjct: 7 HAPRITLRMRSHR-VPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGV 63
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
+ LEI + +D G Y N GEA A++ V G
Sbjct: 64 LTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 101 bits (255), Expect = 1e-25
Identities = 25/94 (26%), Positives = 37/94 (39%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
P + S + GQ RF + + +V W NG ++ + + TL
Sbjct: 8 APRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLE 67
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
I++ +DSG Y V N GEA A L V
Sbjct: 68 ILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 99.7 bits (249), Expect = 7e-25
Identities = 20/95 (21%), Positives = 32/95 (33%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 1697
P T +++ R RF + P +KW+ + S S L
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTL 66
Query: 1698 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+ +DSG + + N G+A A L V
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 91.2 bits (227), Expect = 6e-22
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P T +++ VP F ++ S PT + W+ NG S++ G +
Sbjct: 8 APRITLRMRS-HRVPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGVL 64
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKH 1150
+L++ + DSG Y TN G A A +
Sbjct: 65 TLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGGD 102
Score = 90.8 bits (226), Expect = 8e-22
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
++ P +++W+ NGV L S+I T G++TL I DDS Y TN GEA
Sbjct: 33 QSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASD 92
Query: 64 TCTLKIEDRHW 74
TL + +
Sbjct: 93 YATLDVTGGDY 103
Score = 86.2 bits (214), Expect = 4e-20
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PR ++++ ++ Q+T+F + P +V+W+ NG L ++ + G
Sbjct: 7 HAPRITLRMRSH-RVPCGQNTRFILNV--QSKPTAEVKWYHNGVELQESSKIHYTNTSGV 63
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGK 1520
+ + + +DSG Y TN G A L TG
Sbjct: 64 LTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 85.0 bits (211), Expect = 1e-19
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
P+ T ++S + G + F + + P +V+W+HNG + +++ + G
Sbjct: 7 HAPRITLRMRSHR-VPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGV 63
Query: 467 VVMDIAYVQSHDSGEYVCRAWN 488
+ ++I + DSG Y N
Sbjct: 64 LTLEILDCHTDDSGTYRAVCTN 85
Score = 80.4 bits (199), Expect = 4e-18
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 2/83 (2%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ VP F ++ S PT + W+ NG S++ G ++L++ +
Sbjct: 17 SHRVPCGQNTRFILNVQ--SKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTD 74
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
DSG Y TN G A A +
Sbjct: 75 DSGTYRAVCTNYKGEASDYATLD 97
Score = 78.1 bits (193), Expect = 3e-17
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 19/100 (19%)
Query: 102 PELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEW 161
P + +P + +N F V+ P +V+W
Sbjct: 2 PFTLDHAPRITLRMRSHRVPCGQNTRFILNVQ---------S----------KPTAEVKW 42
Query: 162 FHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+HNG + +++ + G + ++I + DSG Y
Sbjct: 43 YHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAV 82
Score = 74.6 bits (184), Expect = 5e-16
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P + + + G+ F ++ T V++ +NG ++ S +I + G+
Sbjct: 9 PRIT---LRMRSHRVPCGQNTRFILNV--QSKPTAEVKWYHNGVELQESSKIHYTNTSGV 63
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ LEIL +D+G Y TN G+A L+
Sbjct: 64 LTLEILDCHTDDSGTYRAVCTNYKGEASDYATLD 97
Score = 71.6 bits (176), Expect = 5e-15
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
+W+ N L +K T+ G + L+I+ + +DSG Y TN KG A+ TL
Sbjct: 41 KWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLD 97
Score = 70.4 bits (173), Expect = 1e-14
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V+W++NG +L + + G++ L+IL C+ ++SG Y TN G A+L
Sbjct: 40 VKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLD 97
Score = 68.1 bits (167), Expect = 8e-14
Identities = 22/118 (18%), Positives = 34/118 (28%), Gaps = 35/118 (29%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV----EPRV----DPRLRVECSLSTAFFFPFINI 1313
+ PR + S V + RF V V + +
Sbjct: 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVE--------------LQE 51
Query: 1314 STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
S+ N G ++L+I + +D G Y N GEA AT+
Sbjct: 52 SSKIHYTN-------------TSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATL 96
Score = 57.3 bits (139), Expect = 6e-10
Identities = 12/45 (26%), Positives = 17/45 (37%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
AP + + +V G+ RF V P V W NG +
Sbjct: 7 HAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQE 51
Score = 53.8 bits (130), Expect = 9e-09
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
EI + +D G Y N GEA A++ V G
Sbjct: 67 EILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101
Score = 46.1 bits (110), Expect = 4e-06
Identities = 7/37 (18%), Positives = 11/37 (29%)
Query: 1847 AAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
D AP + ++ V G + KP
Sbjct: 1 GPFTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPT 37
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo
sapiens}
Length = 99
Score = 117 bits (296), Expect = 3e-31
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P +T D T++ ++A F + T +P T W +GKA++ G + K D G
Sbjct: 6 KPVIVTGLQDTTVSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
LEI+ DSGLYTC N G ++SCKLT+K
Sbjct: 64 LEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98
Score = 103 bits (258), Expect = 4e-26
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFT 1799
P +T + ++ +A+F K + +P W K+GK I +YK E+ F
Sbjct: 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRP-TAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
L I + DSG Y C N+AG +L +++
Sbjct: 64 LEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98
Score = 98.5 bits (246), Expect = 2e-24
Identities = 21/94 (22%), Positives = 38/94 (40%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
+ PV +Q A+F V+ G+P PT W ++ IT +++
Sbjct: 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFF 63
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 1730
L + + DSG++ +N G S L ++
Sbjct: 64 LEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIK 97
Score = 97.0 bits (242), Expect = 6e-24
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
PV L + + A F + T +P+ W +GK + G +++ D G
Sbjct: 5 SKPVIVTGLQDTT-VSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGG 61
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
LEI D G Y+C N G +S + ++
Sbjct: 62 FFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98
Score = 84.6 bits (210), Expect = 1e-19
Identities = 25/96 (26%), Positives = 36/96 (37%), Gaps = 3/96 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PV + LQD V F + +P W +G+ G + K D G
Sbjct: 6 KPVIVTGLQD-TTVSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGF 62
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKA 1148
L++ DSG Y C N G+ + K+ KA
Sbjct: 63 FLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98
Score = 81.2 bits (201), Expect = 2e-18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P W K+G ++ G + + + D G L I+ DS +YTC N G S
Sbjct: 31 TGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSS 90
Query: 64 TCTLKIE 70
+C L I+
Sbjct: 91 SCKLTIK 97
Score = 76.6 bits (189), Expect = 9e-17
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
P + ++ + A F T +P W +GK I + K+ D G
Sbjct: 5 SKPVIVTGLQDTT-VSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGG 61
Query: 467 VVMDIAYVQSHDSGEYVCRAWN 488
++I + DSG Y C N
Sbjct: 62 FFLEIHKTDTSDSGLYTCTVKN 83
Score = 74.6 bits (184), Expect = 4e-16
Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 3/94 (3%)
Query: 1422 KQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
P VT ++ + KF + G+P W +GK + ++ D G
Sbjct: 4 SSKPVIVTGLQDT-TVSSDSVAKFAVKA--TGEPRPTAIWTKDGKAITQGGKYKLSEDKG 60
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ DSG Y C N G + L
Sbjct: 61 GFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94
Score = 73.9 bits (182), Expect = 7e-16
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V F + +P W +G+ G + K D G L++
Sbjct: 15 DTTVSSDSVAKFAVKAT--GEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTS 72
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTV 601
DSG Y C N G+ + K LT+
Sbjct: 73 DSGLYTCTVKNSAGSVSSSCK-----LTI 96
Score = 73.1 bits (180), Expect = 1e-15
Identities = 20/92 (21%), Positives = 31/92 (33%), Gaps = 19/92 (20%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
PV ++ L D + F + G +P W +GK I
Sbjct: 7 PVIVTGLQDTTVSSDSVAKFAVKAT---------G----------EPRPTAIWTKDGKAI 47
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+ K+ D G ++I + DSG Y C
Sbjct: 48 TQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTC 79
Score = 66.9 bits (164), Expect = 2e-13
Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 7/94 (7%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P+ L + + +A F G+ T + +GK I + + G
Sbjct: 7 PVIV---TGLQDTTVSSDSVAKFAVKA--TGEPRPTAIWTKDGKAITQGGKYKLSEDKGG 61
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
LEI T D+G+YTC N G S L
Sbjct: 62 FFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLT 95
Score = 65.0 bits (159), Expect = 1e-12
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W + K + G K+K + D G L+I DSG+YT NS GS ++S L
Sbjct: 39 IWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94
Score = 64.6 bits (158), Expect = 1e-12
Identities = 16/125 (12%), Positives = 28/125 (22%), Gaps = 49/125 (39%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTAFF 1307
P +T ++ TV +F + P + ++
Sbjct: 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKL--------- 55
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
D G L+I D G Y C N G +
Sbjct: 56 -------------------------SEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSS 90
Query: 1368 KATIS 1372
++
Sbjct: 91 SCKLT 95
Score = 64.6 bits (158), Expect = 1e-12
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
W +GK + G +Y+ D G L+I +SG+Y C N GS + L
Sbjct: 38 AIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKL 94
Score = 58.5 bits (142), Expect = 2e-10
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
PV V+ + V A+F + TG PRP +W +G I
Sbjct: 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQ 49
Score = 49.6 bits (119), Expect = 2e-07
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
EI D G Y+C N G +S + ++
Sbjct: 65 EIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98
Score = 45.0 bits (107), Expect = 1e-05
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + L+D V S + TG+PR
Sbjct: 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPR 35
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation,
phosphorylation, disease MU neuronal development,
immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens}
PDB: 2v9q_A
Length = 212
Score = 121 bits (305), Expect = 5e-31
Identities = 45/207 (21%), Positives = 77/207 (37%), Gaps = 22/207 (10%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS---PDFQIHTFSTKS 1695
PP + + + A + +G P PTI+W++ + + P + S
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 1696 ILIMR----QVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
+ +R + D GV+ +A N G+A A+L V ++ F S
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVA---------ILRDDFRQNPS 119
Query: 1751 SAVINVGQLARFDAK-ISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVED 1809
++ VG+ A + + + W K+G + T+ L+I D
Sbjct: 120 DVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGK---LMITYTRKSD 176
Query: 1810 SGAYECVAMNNAGEARC-EAELVVQSK 1835
+G Y CV N GE AEL V +
Sbjct: 177 AGKYVCVGTNMVGERESEVAELTVLER 203
Score = 106 bits (266), Expect = 7e-26
Identities = 45/234 (19%), Positives = 75/234 (32%), Gaps = 54/234 (23%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALS-----AGSRIKTIND 970
P + P+DL +++ A C+ P+ T+EW+ G+ + S +
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCK--AEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS 66
Query: 971 FGFVILEINDVYLR--DSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANAT 1028
L I D G+Y C A N GEA + +A+
Sbjct: 67 GSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS----------------------HDAS 104
Query: 1029 KNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRI 1088
+ L F ++ V +C+ P+ P I
Sbjct: 105 LEVAIL------------------RDDFRQNPS-DVMVAVGEPAVMECQP-PRGHPEPTI 144
Query: 1089 DWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
W +G P T+ G L + Y D+G+Y+C TN G ++
Sbjct: 145 SWKKDGSPLDDKDERITIRG-G--KLMITYTRKSDAGKYVCVGTNMVGERESEV 195
Score = 96.4 bits (240), Expect = 2e-22
Identities = 39/226 (17%), Positives = 67/226 (29%), Gaps = 47/226 (20%)
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE---- 1606
L +++ P P V P V +GEPA C + G P P + W G + +
Sbjct: 2 SLRQEDFP---PRIVEHPSDLIVSKGEPATLNC-KAEGRPTPTIEWYKGGERVETDKDDP 57
Query: 1607 IVRKITATETTEMEHK----------------------GKIQERVVDASEKPAKPPVFTK 1644
++ + + G+ F +
Sbjct: 58 RSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVA-ILRDDFRQ 116
Query: 1645 KIQPCRAFEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 1703
+ A E + G P PTI W ++ P+ + L++
Sbjct: 117 NPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERIT---IRGGKLMITYTR 173
Query: 1704 MEDSGVFAVIAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTT 1748
D+G + + N G+ + A L V E PSF+
Sbjct: 174 KSDAGKYVCVGTNMVGERESEVAELTVLE----------RPSFVKA 209
Score = 94.5 bits (235), Expect = 9e-22
Identities = 44/215 (20%), Positives = 72/215 (33%), Gaps = 33/215 (15%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI-----FHKNRVKMVS 462
PP+ H L K G+ A C P +EW+ G+ + ++ ++
Sbjct: 9 PPRIVEHPSDLIVSK-GEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 463 DFGFVVMDI--AYVQSHDSGEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPS 510
+ I D G YVC A N F + PS
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQN------PS 119
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
++ V +C+ P+ P I W +G P T+ G L + Y
Sbjct: 120 --DVMVAVGEPAVMECQP-PRGHPEPTISWKKDGSPLDDKDERITIRG-G--KLMITYTR 173
Query: 571 ARDSGEYICRATNKWGTAMTK-AKVICKVLTVIVE 604
D+G+Y+C TN G ++ A++ V+
Sbjct: 174 KSDAGKYVCVGTNMVGERESEVAELTVLERPSFVK 208
Score = 88.3 bits (219), Expect = 1e-19
Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 27/152 (17%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD-----IRYKTLEED 1795
PP + S +++ G+ A + K + W K G+++ D L
Sbjct: 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 1796 NLFTLLIIEAVV--EDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQD 1852
+LF L I+ D G Y CVA N GEA +A L V
Sbjct: 68 SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAI------------------ 109
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRIT-GKPR 1883
+ D V G ++C+ G P
Sbjct: 110 LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPE 141
Score = 81.4 bits (201), Expect = 3e-17
Identities = 40/212 (18%), Positives = 64/212 (30%), Gaps = 53/212 (25%)
Query: 603 VEWFYNGKKLP-----HGHRYRTFHDFGIVILDILYCY--EENSGVYECRATNKYGSDVT 655
+EW+ G+++ + L I++ + GVY C A N G V+
Sbjct: 41 IEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100
Query: 656 KASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSN 715
A L F S+
Sbjct: 101 HD---------------------------------ASLE-------VAILRDDFRQNPSD 120
Query: 716 IDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPE 775
+ + GE A E + P P+ + W +G P+ T G L I+
Sbjct: 121 VM-VAVGEPAVMECQP-PRGHPEPTISWKKDGSPLDDKDERITIRG-G--KLMITYTRKS 175
Query: 776 DCGQYSCRAYNDYGEAVTS-ASMKVQGKRSII 806
D G+Y C N GE + A + V + S +
Sbjct: 176 DAGKYVCVGTNMVGERESEVAELTVLERPSFV 207
Score = 80.2 bits (198), Expect = 7e-17
Identities = 34/205 (16%), Positives = 57/205 (27%), Gaps = 59/205 (28%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
++ PPR V + + + C+ G P +EW+ G+ +
Sbjct: 5 QEDFPPRIVEHPSDLI-VSKGEPATLNCK--AEGRPTPTIEWYKGGERVETDK---DDPR 58
Query: 1480 FGYVAMNFGWVY----------PEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQ 1528
+ + G ++ D G Y+C A N G + A L+
Sbjct: 59 SHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILR------- 111
Query: 1529 LPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVT 1587
F P V GEPA C
Sbjct: 112 ----------------------------------DDFRQNPSDVMVAVGEPAVMECQPPR 137
Query: 1588 GYPRPRVMWLINGHTIVNEIVRKIT 1612
G+P P + W +G + ++ R
Sbjct: 138 GHPEPTISWKKDGSPLDDKDERITI 162
Score = 78.3 bits (193), Expect = 3e-16
Identities = 45/202 (22%), Positives = 62/202 (30%), Gaps = 62/202 (30%)
Query: 6 DPNLKIEWFKNGVPLSLG-----SRIRSTFDFGLVTLSINSLRA--DDSAIYTCKATNLL 58
P IEW+K G + S L L I R D +Y C A N L
Sbjct: 36 RPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYL 95
Query: 59 GEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDV 118
GEAVS + SL L F + +DV
Sbjct: 96 GEAVS------------HDASLEVAILR----------------------DDFRQNPSDV 121
Query: 119 ECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS 178
E +C+ P PE + W +G P+ K+ +
Sbjct: 122 MVAVGEPAVMECQP------------------PRGHPEPTISWKKDGSPLDDKDERITIR 163
Query: 179 DFGFVVMDIAYVQSHDSGEYVC 200
G + I Y + D+G+YVC
Sbjct: 164 G-G--KLMITYTRKSDAGKYVC 182
Score = 75.6 bits (186), Expect = 3e-15
Identities = 52/265 (19%), Positives = 83/265 (31%), Gaps = 66/265 (24%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
+ PPR + + V + EP + E R P + ++ + T
Sbjct: 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIE--------WYKGGERVETDKDDPR 58
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQL 1381
H ++ L F+ + D+G YVC A N GEA +
Sbjct: 59 S--HRMLLPSG--SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH------------- 101
Query: 1382 QNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM- 1440
+ L L F D +V +
Sbjct: 102 --------------------------DASLEVAIL-------RDDFRQNP--SDVMVAVG 126
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
+ ECQ P G P + W +G PL K+ I G + + D+G+Y+C
Sbjct: 127 EPAVMECQ-PPRGHPEPTISWKKDGSPLDDKDERITIRG-G--KLMITYTRKSDAGKYVC 182
Query: 1501 RATNLYGMDETR-AILKTTGKPGII 1524
TN+ G E+ A L +P +
Sbjct: 183 VGTNMVGERESEVAELTVLERPSFV 207
Score = 73.7 bits (181), Expect = 2e-14
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 5/105 (4%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+F P+D+ +A A EC+ P P T+ W +G L TI G
Sbjct: 111 RDDFRQNPSDVMVAVGEPAVMECQP-PRGHPEPTISWKKDGSPLDDKDERITIRG-G--K 166
Query: 976 LEINDVYLRDSGLYTCKATNKHGEA-TTSCKLTVKGRQGIDVEPQ 1019
L I D+G Y C TN GE + +LTV R
Sbjct: 167 LMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKAAA 211
Score = 72.5 bits (178), Expect = 4e-14
Identities = 40/190 (21%), Positives = 63/190 (33%), Gaps = 31/190 (16%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTH-------DFGYVALDIVGAYAEDSGIYTVKATNSKGSA 289
P EW+ + + +H ++ + D G+Y A N G A
Sbjct: 39 PTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEA 98
Query: 290 TTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGK 349
+ L V F + ++ GE A E P G T+ + +G
Sbjct: 99 VSHDA-----SLEVAILRDDFRQNPSDVM-VAVGEPAVMECQ-PPRGHPEPTISWKKDGS 151
Query: 350 PIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKS 404
P++ T+ G L I T+ D G Y C TN G+ AE++V
Sbjct: 152 PLDDKDERITIRG-G--KLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVL------- 201
Query: 405 KGQPPKFTSH 414
+ P F
Sbjct: 202 --ERPSFVKA 209
Score = 72.1 bits (177), Expect = 6e-14
Identities = 33/183 (18%), Positives = 57/183 (31%), Gaps = 43/183 (23%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV----KTVYDFG---FISLD 565
+L V + +C+ E PT I+W+ G T + + G F+ +
Sbjct: 18 DLIVSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIV 75
Query: 566 MDYVYARDSGEYICRATNKWGTAMTK---------------------------AKVICKV 598
D G Y+C A N G A++ A + C+
Sbjct: 76 HGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQP 135
Query: 599 L----TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV 654
+ W +G L T ++I + ++G Y C TN G
Sbjct: 136 PRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTR---KSDAGKYVCVGTNMVGERE 192
Query: 655 TKA 657
++
Sbjct: 193 SEV 195
Score = 71.0 bits (174), Expect = 1e-13
Identities = 34/212 (16%), Positives = 58/212 (27%), Gaps = 55/212 (25%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + H +D+ + E +C+ E G P +EW+ G+ +
Sbjct: 10 PRIVEHPSDLIVSKGEPATLNCKAE---------G----------RPTPTIEWYKGGERV 50
Query: 169 -----FHKNRVKMVSDFGFVVMDI--AYVQSHDSGEYVCQWFVNNKPLPAGAKF--KTTH 219
++ ++ + I D G YVC N G +
Sbjct: 51 ETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVC--VARNY---LGEAVSHDASL 105
Query: 220 DFGYVALDIELMLKTLV-------------------PFTEWFVNNKPLPAGAKFKTTHDF 260
+ + D ++ P W + PL + T
Sbjct: 106 EVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRG- 164
Query: 261 GYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
G L I D+G Y TN G +
Sbjct: 165 G--KLMITYTRKSDAGKYVCVGTNMVGERESE 194
Score = 69.1 bits (169), Expect = 6e-13
Identities = 40/204 (19%), Positives = 62/204 (30%), Gaps = 53/204 (25%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG-----SRFRTFC 760
P S++ + +GE A + P +EW+ G+ ++T S
Sbjct: 9 PPRIVEHPSDLI-VSKGEPATLNCK--AEGRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 761 DFGFVILEISPVY--PEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEV 817
L I D G Y C A N GEAV+ AS++V R ++ P + V
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQN--PSDVMV 123
Query: 818 F----ISFH-----------------------------------EISPVYPEDCGQYSCR 838
I+ D G+Y C
Sbjct: 124 AVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCV 183
Query: 839 AYNDYGEAVTS-ASMKVQGKRSII 861
N GE + A + V + S +
Sbjct: 184 GTNMVGERESEVAELTVLERPSFV 207
Score = 60.6 bits (147), Expect = 4e-10
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
PR P I W K+G PL + G L I R D+ Y C TN++GE
Sbjct: 136 PRGHPEPTISWKKDGSPLDDKDERITIRG-G--KLMITYTRKSDAGKYVCVGTNMVGERE 192
Query: 63 S-TCTLKIEDR 72
S L + +R
Sbjct: 193 SEVAELTVLER 203
Score = 39.4 bits (92), Expect = 0.005
Identities = 24/121 (19%), Positives = 36/121 (29%), Gaps = 22/121 (18%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLI 1319
+ F V V EP E + PR P P I
Sbjct: 107 VAILRDDFRQNPSDVMVAVGEPAVMECQP-PRGHPE-------------PTI-----SWK 147
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK-ATISCKKIPT 1378
+ + + L I Y D G+YVC N GE ++ A ++ + P+
Sbjct: 148 KDG--SPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPS 205
Query: 1379 I 1379
Sbjct: 206 F 206
Score = 37.1 bits (86), Expect = 0.030
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 1847 AAVAQDE-APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
++ Q++ P + E D V +G TL C+ G+P
Sbjct: 1 GSLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPT 38
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell
adhesion, immunoglobulin domain; 3.2A {Drosophila
melanogaster} PDB: 2vra_A*
Length = 217
Score = 119 bits (300), Expect = 2e-30
Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 21/213 (9%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF----ST 1693
+ P + + + A + +G P PTI+WF++ P++++ +
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGAL 67
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
M+ +D G + +A+NR G+A A+L + V+ F
Sbjct: 68 FFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIA---------VLRDDFRVEPKDT 118
Query: 1753 VINVGQLARFD-AKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF-----TLLIIEAV 1806
+ G+ A + + W+K+G + + LLI
Sbjct: 119 RVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVE 178
Query: 1807 VEDSGAYECVAMNNAGEAR-CEAELVVQSKKAP 1838
D G Y+C+A N G A+L+VQ K A
Sbjct: 179 PIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAA 211
Score = 111 bits (278), Expect = 2e-27
Identities = 52/240 (21%), Positives = 83/240 (34%), Gaps = 59/240 (24%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS----RIKTIND 970
++P + PTDL + ++ A C+ P T+EWF +G+ +S R++ +
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNCK--VEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDG 65
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKN 1030
F + +D G Y C A N+ G+A + +A+
Sbjct: 66 ALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVS----------------------RHASLQ 103
Query: 1031 IQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 1090
I L F + +D V + +C PK P + W
Sbjct: 104 IAVL------------------RDDFRVEPKD-TRVAKGETALLECG-PPKGIPEPTLIW 143
Query: 1091 FFNGRP--------FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
+G P F SRV+ V +L + V D G Y C A N GT +
Sbjct: 144 IKDGVPLDDLKAMSFGASSRVRIVDGG---NLLISNVEPIDEGNYKCIAQNLVGTRESSY 200
Score = 97.6 bits (243), Expect = 8e-23
Identities = 53/223 (23%), Positives = 76/223 (34%), Gaps = 42/223 (18%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI----FHKNRVKMVS 462
Q P+ H L K + A C + PE +EWF +G+P+ +RV+
Sbjct: 8 QSPRIIEHPTDLVVKK-NEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSHRVQFKD 64
Query: 463 DFGFVVMDIAYVQSHDSGEYVCRAWN------------NFIFIPPFPIFIFHQIRLPSPS 510
F + + D GEY C A N + F P
Sbjct: 65 GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDD----FRV----EPK 116
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP--------FATGSRVKTVYDFGFI 562
+ V + +C PK P + W +G P F SRV+ V
Sbjct: 117 --DTRVAKGETALLECG-PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGG--- 170
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTK-AKVICKVLTVIVE 604
+L + V D G Y C A N GT + AK+I +V
Sbjct: 171 NLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHH 213
Score = 95.7 bits (238), Expect = 4e-22
Identities = 42/204 (20%), Positives = 71/204 (34%), Gaps = 31/204 (15%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTI-VNEIVRKITATETTE 1618
++P + P V++ EPA C +V G P P + W +G + NE +
Sbjct: 8 QSPRIIEHPTDLVVKKNEPATLNC-KVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGA 66
Query: 1619 MEHKGKIQERVVD---------------ASEKPAK------PPVFTKKIQPCRAFEQDQA 1657
+ +Q + A + A F + + R + + A
Sbjct: 67 LFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETA 126
Query: 1658 RFE-VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI-----LIMRQVFMEDSGVFA 1711
E G P PT+ W ++ P+ S I L++ V D G +
Sbjct: 127 LLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYK 186
Query: 1712 VIAENRGGKAK-CSANLVVEEKRQ 1734
IA+N G + A L+V+ K
Sbjct: 187 CIAQNLVGTRESSYAKLIVQVKAA 210
Score = 94.5 bits (235), Expect = 1e-21
Identities = 44/199 (22%), Positives = 70/199 (35%), Gaps = 31/199 (15%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEA----SHRIRTVH 361
P L + + E A G T+E+ +G+P+ SHR++
Sbjct: 10 PRIIEHPTDL-VVKKNEPATLNCKVE----GKPEPTIEWFKDGEPVSTNEKKSHRVQFKD 64
Query: 362 AFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLECVDKSKGQPPKFTSHIK 416
+ G K +D G Y C A N+ GQ A + + F K
Sbjct: 65 GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQI--------AVLRDDFRVEPK 116
Query: 417 SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-----I 471
+ G++A EC P PE + W +G P+ + + ++D I
Sbjct: 117 DTR-VAKGETALLECG-PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLI 174
Query: 472 AYVQSHDSGEYVCRAWNNF 490
+ V+ D G Y C A N
Sbjct: 175 SNVEPIDEGNYKCIAQNLV 193
Score = 90.3 bits (224), Expect = 3e-20
Identities = 28/148 (18%), Positives = 48/148 (32%), Gaps = 24/148 (16%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD---IRYKTLEEDNLF 1798
P + + V+ + A + K+ + W K+G+ + + ++ LF
Sbjct: 9 SPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALF 68
Query: 1799 TLLIIEAV-VEDSGAYECVAMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
++ +D G Y CVA N G+A A L +
Sbjct: 69 FYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAV------------------LRDD 110
Query: 1857 VAEPLKDQNVKEGSAVTLKC-RITGKPR 1883
KD V +G L+C G P
Sbjct: 111 FRVEPKDTRVAKGETALLECGPPKGIPE 138
Score = 87.2 bits (216), Expect = 3e-19
Identities = 36/199 (18%), Positives = 62/199 (31%), Gaps = 50/199 (25%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF-- 1480
Q PR + + + + C+ G P +EWF +G+P+ + + F
Sbjct: 8 QSPRIIEHPTDLV-VKKNEPATLNCK--VEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKD 64
Query: 1481 --GYVAMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQLPKGMKSIE 1537
+ +D GEY C A N G +R A L+
Sbjct: 65 GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLR---------------- 108
Query: 1538 KIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMW 1596
F +P+ +V +GE A C G P P ++W
Sbjct: 109 -------------------------DDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIW 143
Query: 1597 LINGHTIVNEIVRKITATE 1615
+ +G + + A+
Sbjct: 144 IKDGVPLDDLKAMSFGASS 162
Score = 85.7 bits (212), Expect = 1e-18
Identities = 41/205 (20%), Positives = 62/205 (30%), Gaps = 63/205 (30%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDF----GLVTLSINSLRADDSAIYTCKATNLLGEA 61
P IEWFK+G P+S + F ++ + D Y C A N +G+A
Sbjct: 36 KPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQA 95
Query: 62 VS-TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
VS +L+I LR D F D
Sbjct: 96 VSRHASLQI--------AVLRDD---------------------------FRVEPKDTRV 120
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
+ E +C P PE + W +G P+ + +
Sbjct: 121 AKGETALLECGP------------------PKGIPEPTLIWIKDGVPLDDLKAMSFGASS 162
Query: 181 GFVVMD-----IAYVQSHDSGEYVC 200
++D I+ V+ D G Y C
Sbjct: 163 RVRIVDGGNLLISNVEPIDEGNYKC 187
Score = 84.5 bits (209), Expect = 3e-18
Identities = 49/281 (17%), Positives = 80/281 (28%), Gaps = 85/281 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-------VECSLSTAFFFPFINIS 1314
+ PR I + V++ EP +VE + +P + V + + F + +
Sbjct: 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGA 66
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
F + +D GEY C A N G+A ++
Sbjct: 67 ----------------------LFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHA---- 100
Query: 1375 KIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQ 1434
++Q+ F + +
Sbjct: 101 ---SLQIAVL---------------------------------------RDDFRVEP--K 116
Query: 1435 DQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW---- 1489
D V ++ EC P G P + W +G PL + ++ G
Sbjct: 117 DTRVAKGETALLECG-PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLIS 175
Query: 1490 -VYPEDSGEYLCRATNLYGMDETR-AILKTTGKPGIIYESQ 1528
V P D G Y C A NL G E+ A L K +
Sbjct: 176 NVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHHH 216
Score = 84.5 bits (209), Expect = 3e-18
Identities = 48/219 (21%), Positives = 69/219 (31%), Gaps = 54/219 (24%)
Query: 603 VEWFYNGKKL----PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT-KA 657
+EWF +G+ + HR + + E++ G Y C A N+ G V+ A
Sbjct: 41 IEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHA 100
Query: 658 SLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNID 717
SL+ I L F V +
Sbjct: 101 SLQ-----------------------IAVL------------------RDDFRVEPKDTR 119
Query: 718 DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-----LEISPV 772
+ +GE A E P P+ + W +G P+ I L IS V
Sbjct: 120 -VAKGETALLECG-PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNV 177
Query: 773 YPEDCGQYSCRAYNDYGEAVTS-ASMKVQGKRSIILESQ 810
P D G Y C A N G +S A + VQ K +
Sbjct: 178 EPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHHH 216
Score = 78.8 bits (194), Expect = 3e-16
Identities = 28/110 (25%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+F P D +A+ A EC P P T+ W +G L + I
Sbjct: 108 RDDFRVEPKDTRVAKGETALLECG-PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRI 166
Query: 976 -----LEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVKGRQGIDVEPQ 1019
L I++V D G Y C A N G +S KL V+ +
Sbjct: 167 VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHHH 216
Score = 75.3 bits (185), Expect = 5e-15
Identities = 43/201 (21%), Positives = 66/201 (32%), Gaps = 50/201 (24%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P I H P+ +L V + +C++E P I+WF +G P +T +
Sbjct: 10 PRIIEH------PT--DLVVKKNEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSHR 59
Query: 557 YDF----GFISLDMDYVYARDSGEYICRATNKWGTAMT-KAKVICKVL-----------T 600
F F M +D GEY C A N+ G A++ A + VL
Sbjct: 60 VQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTR 119
Query: 601 VI-------------------VEWFYNGKKLPHGHRYRTFHDFGIVILD-----ILYCYE 636
V + W +G L + I+D I
Sbjct: 120 VAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEP 179
Query: 637 ENSGVYECRATNKYGSDVTKA 657
+ G Y+C A N G+ +
Sbjct: 180 IDEGNYKCIAQNLVGTRESSY 200
Score = 74.5 bits (183), Expect = 8e-15
Identities = 46/242 (19%), Positives = 67/242 (27%), Gaps = 60/242 (24%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
+ SP I H D+ K+NE +C+VE PE +EWF +
Sbjct: 6 QYQSPRIIEHPTDLVVKKNEPATLNCKVE-------------------GKPEPTIEWFKD 46
Query: 165 GKPI----FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKF--KTT 218
G+P+ +RV+ F + + D GEY C N+ G +
Sbjct: 47 GEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC--VAKNR---VGQAVSRHAS 101
Query: 219 HDFGYVALDIELMLKTLV-------------------PFTEWFVNNKPLPAGAKFKTTHD 259
+ D + K P W + PL
Sbjct: 102 LQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGAS 161
Query: 260 FGYV-----ALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQF 314
L I D G Y A N G+ +S +L V
Sbjct: 162 SRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYA-----KLIVQVK-AAAHHHH 215
Query: 315 QH 316
H
Sbjct: 216 HH 217
Score = 73.4 bits (180), Expect = 2e-14
Identities = 44/214 (20%), Positives = 69/214 (32%), Gaps = 58/214 (27%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF-- 762
Q+P +++ +++ E A + P+ +EWF +G+P+ T + F
Sbjct: 8 QSPRIIEHPTDLV-VKKNEPATLNCK--VEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKD 64
Query: 763 --GFVILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEVF- 818
F + +D G+Y C A N G+AV+ AS+++ R PK V
Sbjct: 65 GALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVE--PKDTRVAK 122
Query: 819 ---ISFH-------------------------------------------EISPVYPEDC 832
IS V P D
Sbjct: 123 GETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDE 182
Query: 833 GQYSCRAYNDYGEAVTS-ASMKVQGKRSIILESQ 865
G Y C A N G +S A + VQ K +
Sbjct: 183 GNYKCIAQNLVGTRESSYAKLIVQVKAAAHHHHH 216
Score = 68.7 bits (168), Expect = 7e-13
Identities = 40/188 (21%), Positives = 66/188 (35%), Gaps = 19/188 (10%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDF----GYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
P EWF + +P+ K F + + G +D G Y A N G A +
Sbjct: 39 PTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSR 98
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE 352
L + F ++ + +++GE A E P G T+ ++ +G P++
Sbjct: 99 HA-----SLQIAVLRDDFRVEPKDTR-VAKGETALLECG-PPKGIPEPTLIWIKDGVPLD 151
Query: 353 ASHRIRTVHAFGMVV-----LEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECVDKSKG 406
+ + + + L I + D G Y C A N G E L V + K
Sbjct: 152 DLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLI-V-QVKA 209
Query: 407 QPPKFTSH 414
H
Sbjct: 210 AAHHHHHH 217
Score = 63.3 bits (154), Expect = 5e-11
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
P + P D L V + +C++E P I+WF +G P +T +
Sbjct: 2 PLAGQYQSPRIIEHPTD-LVVKKNEPATLNCKVE--GKPEPTIEWFKDGEPVSTNEKKSH 58
Query: 1106 VYDF----GFISLDMDYVYARDSGEYICRATNKWGTAMTK 1141
F F M +D GEY C A N+ G A+++
Sbjct: 59 RVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNRVGQAVSR 98
Score = 60.3 bits (146), Expect = 5e-10
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-----TLSINSLRADDSAIYTCKATN 56
P+ P + W K+GVPL + + L I+++ D Y C A N
Sbjct: 132 PPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQN 191
Query: 57 LLGEAVST 64
L+G S+
Sbjct: 192 LVGTRESS 199
Score = 41.4 bits (97), Expect = 0.001
Identities = 20/113 (17%), Positives = 31/113 (27%), Gaps = 19/113 (16%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS---TA 1316
I F E + V + E E C P +
Sbjct: 104 IAVLRDDFRVEPKDTRVAKGETALLE--------------CGPPKGI--PEPTLIWIKDG 147
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKA 1369
+ + + S + + +L I V P D+G Y C A N G +
Sbjct: 148 VPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSY 200
Score = 39.8 bits (93), Expect = 0.004
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
+ +D G+Y C A N G+AV+ AS+++ R PK + A LE
Sbjct: 73 MQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVE--PKDTRVAKGETALLE 129
Score = 39.5 bits (92), Expect = 0.006
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 1842 APAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
AP G Q ++P + E D VK+ TL C++ GKP
Sbjct: 1 APLAG----QYQSPRIIEHPTDLVVKKNEPATLNCKVEGKPE 38
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight
junction formation, immunoglobulin superfamily, immune
system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB:
3eoy_G
Length = 209
Score = 116 bits (292), Expect = 2e-29
Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 26/213 (12%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI---------H 1689
R E + + + G P ++W + T +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 1690 TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI 1749
TF I + V ED+G + + GG + + + VPPS T
Sbjct: 64 TFLPTGITF-KSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL--------VPPSKPTVN 114
Query: 1750 SSAVINVGQLARFDAKISATKP-LDVYWLKNGKKIIPDIRYKTLEEDNLF-------TLL 1801
+ +G A P + W K+G + + + ++ + L+
Sbjct: 115 IPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELV 174
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
D+G Y C A N G + +++
Sbjct: 175 FDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207
Score = 96.2 bits (239), Expect = 2e-22
Identities = 39/248 (15%), Positives = 67/248 (27%), Gaps = 59/248 (23%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+ ++ ++ + E+ C + S VEW + + +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCA--YSGFSSPRVEWKFDQGDTTRLVCYNNKITASYED 61
Query: 976 --------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANA 1027
+ V D+G YTC + + G + K+ + V
Sbjct: 62 RVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKL----------IVLV----- 106
Query: 1028 TKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMR 1087
PP + + C E P
Sbjct: 107 -------------------------PPSKPTVNIP-SSATIGNRAVLTCS-EQDGSPPSE 139
Query: 1088 IDWFFNGRPFATGSRVKTVYDFGFISLDMDY-------VYARDSGEYICRATNKWGTAMT 1140
WF +G T + + L+ + A D+GEY C A N +GT MT
Sbjct: 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMT 199
Query: 1141 KAKVICKA 1148
V +A
Sbjct: 200 SNAVRMEA 207
Score = 88.9 bits (220), Expect = 8e-20
Identities = 36/204 (17%), Positives = 60/204 (29%), Gaps = 36/204 (17%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTE-- 1618
+ S ++ E P + C +G+ PRV W + + T + E
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSC-AYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDR 62
Query: 1619 --------------MEHKGK---IQERVVDASEKPAK-------PPVFTKKIQPCRAFEQ 1654
E G + S K PP P A
Sbjct: 63 VTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIG 122
Query: 1655 DQARFE-VEFDGDPLPTIKWFREDFPITSSPDFQI-------HTFSTKSILIMRQVFMED 1706
++A E DG P WF++ + ++P T L+ + D
Sbjct: 123 NRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASD 182
Query: 1707 SGVFAVIAENRGGKAKCSANLVVE 1730
+G ++ A N G S + +E
Sbjct: 183 TGEYSCEARNGYGTPMTSNAVRME 206
Score = 84.6 bits (209), Expect = 2e-18
Identities = 27/196 (13%), Positives = 47/196 (23%), Gaps = 65/196 (33%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
V ED G Y+C + G + + L +P
Sbjct: 72 FKSVTREDTGTYTCMVSEEGGNSYGEV--------KVKLIVLVP---------------- 107
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
P T + A C
Sbjct: 108 ---------------------------------PSKPTVNIPSSATIGNRAVLTCSEQ-D 133
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVI-------LEINDVYLRDSGLYTCKATNK 996
P WF +G + + + L + + D+G Y+C+A N
Sbjct: 134 GSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNG 193
Query: 997 HGEATTSCKLTVKGRQ 1012
+G TS + ++ +
Sbjct: 194 YGTPMTSNAVRMEAVE 209
Score = 83.1 bits (205), Expect = 8e-18
Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 40/203 (19%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI----FHKNRVKMVSDFGFVVMD----IAYVQ 475
+ C + +VEW + + N++ + + V
Sbjct: 19 NNPVKLSCAYS--GFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVT 76
Query: 476 SHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVH 523
D+G Y C + +PP P+ + +
Sbjct: 77 REDTGTYTCMVSEEGGNSYGEVKVKLIVLVPP---------SKPTVNIP-SSATIGNRAV 126
Query: 524 FDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY-------VYARDSGE 576
C E P WF +G T + + L+ + A D+GE
Sbjct: 127 LTCS-EQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGE 185
Query: 577 YICRATNKWGTAMTKAKVICKVL 599
Y C A N +GT MT V + +
Sbjct: 186 YSCEARNGYGTPMTSNAVRMEAV 208
Score = 80.8 bits (199), Expect = 5e-17
Identities = 38/217 (17%), Positives = 61/217 (28%), Gaps = 63/217 (29%)
Query: 603 VEWFYNGKKLPHGHRYR-----------TFHDFGIVILDILYCYEENSGVYECRATNKYG 651
VEW ++ Y TF GI + E++G Y C + + G
Sbjct: 36 VEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVT---REDTGTYTCMVSEEGG 92
Query: 652 SDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTV 711
+ + +K L +P P
Sbjct: 93 NSYGEVKVK--------LIVLVP--------------------------------PSKPT 112
Query: 712 PLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI----- 766
G A P + WF +G M T + +
Sbjct: 113 VNIPSS-ATIGNRAVLTCSEQ-DGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTT 170
Query: 767 --LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L P+ D G+YSC A N YG +TS +++++
Sbjct: 171 GELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEA 207
Score = 77.7 bits (191), Expect = 6e-16
Identities = 30/185 (16%), Positives = 48/185 (25%), Gaps = 57/185 (30%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+ V ED G Y C + G ++ + + +L VP
Sbjct: 69 GITFKSVTREDTGTYTCMVSEEGGNSYGEVKV--------KLIVLVP------------- 107
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMK 1458
P K + C G P +
Sbjct: 108 -------------------PSKPTVN--------IPSSATIGNRAVLTCS-EQDGSPPSE 139
Query: 1459 VEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-------VYPEDSGEYLCRATNLYGMDET 1511
WF +G +P + + +N + D+GEY C A N YG T
Sbjct: 140 YTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMT 199
Query: 1512 RAILK 1516
++
Sbjct: 200 SNAVR 204
Score = 75.8 bits (186), Expect = 2e-15
Identities = 23/211 (10%), Positives = 50/211 (23%), Gaps = 67/211 (31%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--------TLSINSLRADDSAIYTCKATNL 57
+ ++EW + + + ++ S+ +D+ YTC +
Sbjct: 31 FSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEE 90
Query: 58 LGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLND 117
G + +K+ V P +
Sbjct: 91 GGNSYGEVKVKLI----------------------------------VLVPPSKPTVNIP 116
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 177
C + G P + WF +G + +
Sbjct: 117 SSATIGNRAVLTCSE--------QDG----------SPPSEYTWFKDGIVMPTNPKSTRA 158
Query: 178 SDFGFVVMD-------IAYVQSHDSGEYVCQ 201
V++ + + D+GEY C+
Sbjct: 159 FSNSSYVLNPTTGELVFDPLSASDTGEYSCE 189
Score = 69.2 bits (169), Expect = 4e-13
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 48/198 (24%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI------ 562
S+ + +PE V C + R++W F+ +
Sbjct: 9 SSEPEVRIPENNPVKLSCA--YSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL 66
Query: 563 --SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVL--------------------- 599
+ V D+G Y C + + G + + KV VL
Sbjct: 67 PTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAV 126
Query: 600 ----------TVIVEWFYNGKKLPHGHRYRTFHDFGIVI-------LDILYCYEENSGVY 642
WF +G +P + + L ++G Y
Sbjct: 127 LTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEY 186
Query: 643 ECRATNKYGSDVTKASLK 660
C A N YG+ +T +++
Sbjct: 187 SCEARNGYGTPMTSNAVR 204
Score = 68.8 bits (168), Expect = 6e-13
Identities = 30/179 (16%), Positives = 49/179 (27%), Gaps = 22/179 (12%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVA--------LDIVGAYAEDSGIYTVKATNSKG 287
P EW + + Y + ED+G YT + G
Sbjct: 33 SPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGG 92
Query: 288 SATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN 347
++ + +L V P S + G A S G + +
Sbjct: 93 NSYGEVKV----KLIV-LVPPSKPTVNIPSS-ATIGNRAVLTCS-EQDGSPPSEYTWFKD 145
Query: 348 GKPIEASHRIRTVHAFGMVV-------LEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
G + + + + V L DTG Y+C A N +G S +
Sbjct: 146 GIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVR 204
Score = 67.7 bits (165), Expect = 1e-12
Identities = 20/153 (13%), Positives = 36/153 (23%), Gaps = 30/153 (19%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL---- 1797
+ ++ I + S V W + + Y +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRV 63
Query: 1798 ----FTLLIIEAVVEDSGAYECVAMNNAGEARCEA--ELVVQSKKAPGKQAPAPGAAVAQ 1851
+ ED+G Y C+ G + E +L+V
Sbjct: 64 TFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL------------------ 105
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRIT-GKPR 1883
P+ + G+ L C G P
Sbjct: 106 -VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPP 137
Score = 67.3 bits (164), Expect = 2e-12
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKA 54
E P + WFK+G+ + + F L + L A D+ Y+C+A
Sbjct: 131 EQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEA 190
Query: 55 TNLLGEAVSTCTLKIE 70
N G +++ +++E
Sbjct: 191 RNGYGTPMTSNAVRME 206
Score = 66.1 bits (161), Expect = 5e-12
Identities = 25/190 (13%), Positives = 41/190 (21%), Gaps = 52/190 (27%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLP----HKNRFNPIY 1478
+ + K C G + +VEW + + N+ Y
Sbjct: 2 MGSVTVHSSEPEVRIPENNPVKLSCA--YSGFSSPRVEWKFDQGDTTRLVCYNNKITASY 59
Query: 1479 DFGYVAMN----FGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMK 1534
+ + F V ED+G Y C + G +K
Sbjct: 60 EDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL-------------- 105
Query: 1535 SIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR 1593
P + G A C+ G P
Sbjct: 106 --------------------------VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSE 139
Query: 1594 VMWLINGHTI 1603
W +G +
Sbjct: 140 YTWFKDGIVM 149
Score = 66.1 bits (161), Expect = 5e-12
Identities = 27/209 (12%), Positives = 54/209 (25%), Gaps = 63/209 (30%)
Query: 706 APVFTVPLSNIDDLREGENAHFE--ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
+ + + E + +VEW ++ +
Sbjct: 4 SVTVHSSEPEVR-IPENNPVKLSCAY----SGFSSPRVEWKFDQGDTTRLVCYNNKITAS 58
Query: 764 FVI--------LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK------------- 802
+ + V ED G Y+C + G + +K+
Sbjct: 59 YEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSS 118
Query: 803 ----RSIILE------------------SQLPKGMEVFISFHE-------------ISPV 827
+L +P + +F P+
Sbjct: 119 ATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPL 178
Query: 828 YPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
D G+YSC A N YG +TS +++++
Sbjct: 179 SASDTGEYSCEARNGYGTPMTSNAVRMEA 207
Score = 61.5 bits (149), Expect = 2e-10
Identities = 39/235 (16%), Positives = 64/235 (27%), Gaps = 80/235 (34%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
S S +V EN V C G +VEW +
Sbjct: 4 SVTVHSSEPEVRIPENNPVKLSCAYS---------G----------FSSPRVEWKFDQGD 44
Query: 168 I----FHKNRVKMVSDFGFVVMD----IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH 219
+ N++ + + V D+G Y C V+
Sbjct: 45 TTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCM--VSE------------- 89
Query: 220 DFGYVALDIELMLKTLVP--FTE-----------------------------WFVNNKPL 248
+ G ++++ L LVP WF + +
Sbjct: 90 EGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVM 149
Query: 249 PAGAK-FKTTHDFGYVA------LDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P K + + YV L A D+G Y+ +A N G+ TS ++
Sbjct: 150 PTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVR 204
Score = 45.7 bits (108), Expect = 4e-05
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 10/100 (10%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
V + + +PE V C + R++W F+ +
Sbjct: 3 GSVTVHSSEPEVRIPENNPVKLSCA--YSGFSSPRVEWKFDQGDTTRLVCYNNKITASYE 60
Query: 1113 --------SLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ V D+G Y C + + G + + KV
Sbjct: 61 DRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKV 100
Score = 45.3 bits (107), Expect = 5e-05
Identities = 19/116 (16%), Positives = 26/116 (22%), Gaps = 21/116 (18%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS-----TA 1316
PP T + CS P +
Sbjct: 105 LVPPSKPTVNIPSSATIGNRAVLT--------------CSEQDGS--PPSEYTWFKDGIV 148
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
A S + + L D + D GEY C A N +G T +
Sbjct: 149 MPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVR 204
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane,
glycoprotein, signal, complex (immunoglobulin/receptor);
2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB:
1ira_Y* 4dep_B* 1g0y_R
Length = 315
Score = 119 bits (300), Expect = 2e-29
Identities = 48/318 (15%), Positives = 95/318 (29%), Gaps = 49/318 (15%)
Query: 315 QHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTK 374
+ + S EI L P + T+ + + S + L + K
Sbjct: 12 KIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAK 70
Query: 375 IEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC--- 431
+ED+G Y C N I ++ + V+ + + + L C
Sbjct: 71 VEDSGHYYCVVRNSSYCLRIKISAKFVENEP--NLCYNAQAIFKQKLPVAGDGGLVCPYM 128
Query: 432 -TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
N+ K++W+ + KP+ N + + V G Y C A +
Sbjct: 129 EFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLI---VMNVAEKHRGNYTCHASYTY 185
Query: 491 IFI-----------------PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSD 533
+ P P+ + SP+ + ++V ++ C +
Sbjct: 186 LGKQYPITRVIEFITLEENKPTRPVIV-------SPANETMEVDLGSQIQLICNVT--GQ 236
Query: 534 PTMRIDWFFNGRPFATGSRVKTVYDFGFIS------------LDMDYVYARD-SGEYICR 580
+ W +NG V + + L++ + +R + C
Sbjct: 237 LSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCF 296
Query: 581 ATNKWGTAMTKAKVICKV 598
A N G ++I V
Sbjct: 297 AKNTHGIDAAYIQLIYPV 314
Score = 112 bits (280), Expect = 1e-26
Identities = 42/314 (13%), Positives = 82/314 (26%), Gaps = 45/314 (14%)
Query: 1561 EAPVFVSQPEAQKV--QEGEPARFCTRVTGYP-RPRVMWLINGHT--IVNEIVRKITATE 1615
EA + E + E + + + W + + E +I +
Sbjct: 2 EADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHK 61
Query: 1616 TT------EMEHKGK--------IQERVVDAS----EKPAKPPVFTKKIQPCRAFEQDQA 1657
++E G + S E + I +
Sbjct: 62 EKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDG 121
Query: 1658 RFE------VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 1711
+ + + LP ++W+++ P+ IH K LI+ V + G +
Sbjct: 122 GLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN---IHFSGVKDRLIVMNVAEKHRGNYT 178
Query: 1712 VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP 1771
A + V+E P + +++G + ++
Sbjct: 179 CHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLS 238
Query: 1772 LDVYWLKNGKKIIPDIRYKTLE------------EDNLFTLLIIEAVVED-SGAYECVAM 1818
YW NG I D + + L I E + C A
Sbjct: 239 DIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAK 298
Query: 1819 NNAGEARCEAELVV 1832
N G +L+
Sbjct: 299 NTHGIDAAYIQLIY 312
Score = 109 bits (272), Expect = 1e-25
Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 30/270 (11%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W+ ++ P + + L V A EDSG Y NS +
Sbjct: 39 TWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA---- 94
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFE----ASLIPVGDQTMTVEFLYNGKPIEASH 355
+ N ++ Q L ++ +++ + KP+ +
Sbjct: 95 KFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 154
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS----VNLECVDKSKGQPPKF 411
+ L ++ + G YTC A+ + + + ++++K P
Sbjct: 155 IHFSGV---KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 211
Query: 412 TSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI------FHKNRVKMVSDFG 465
S + G C +T W NG I ++ + +
Sbjct: 212 VSPANETMEVDLGSQIQLICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPAN 269
Query: 466 F------VVMDIAYVQSHD-SGEYVCRAWN 488
V++I+ ++S + C A N
Sbjct: 270 KRRSTLITVLNISEIESRFYKHPFTCFAKN 299
Score = 104 bits (260), Expect = 3e-24
Identities = 34/219 (15%), Positives = 67/219 (30%), Gaps = 12/219 (5%)
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 1724
+ TI W+++D S + K L +EDSG + + N +
Sbjct: 32 NEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91
Query: 1725 ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKII 1784
+ E + + K + + W K+ K ++
Sbjct: 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLL 151
Query: 1785 PDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPA 1844
D + + +D L+++ + G Y C A + V++ +
Sbjct: 152 LDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTR 208
Query: 1845 PGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P V+ + V GS + L C +TG+
Sbjct: 209 P---------VIVSPANETMEVDLGSQIQLICNVTGQLS 238
Score = 99.4 bits (247), Expect = 2e-22
Identities = 34/236 (14%), Positives = 61/236 (25%), Gaps = 58/236 (24%)
Query: 909 IEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL----SAGSR 964
+E D K E L + + + C L P T+ W+ + SR
Sbjct: 1 LEADKCKERE---EKIILVSSANEIDVRPCPLNPNEHKG-TITWYKDDSKTPVSTEQASR 56
Query: 965 IKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIF 1024
I + L + DSG Y C N
Sbjct: 57 IHQHKE----KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF---------------- 96
Query: 1025 ANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDC----RLEP 1080
E + +Q +P AG C +
Sbjct: 97 -----------------------VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKN 133
Query: 1081 KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 1136
+++ ++ W+ + +P + + L + V + G Y C A+ +
Sbjct: 134 ENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYL 186
Score = 98.3 bits (244), Expect = 5e-22
Identities = 33/351 (9%), Positives = 75/351 (21%), Gaps = 84/351 (23%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLP-HKNRFNPIYDFG 1481
+ + + + + + + W+ + P + + I+
Sbjct: 2 EADKCKEREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHK 61
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
+ F EDSG Y C N + K
Sbjct: 62 EK-LWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFV----------------------- 97
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF------CTRVTGYPRPRVM 1595
E QK+ + P++
Sbjct: 98 ---------------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQ 142
Query: 1596 WLINGHTIVNEIVRKITATET-----TEMEHKGK-------------------IQERVVD 1631
W + ++ + + + +H+G I+ +
Sbjct: 143 WYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITL- 201
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
KP +P + + + Q + G W I +
Sbjct: 202 EENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDY 261
Query: 1692 STK------------SILIMRQVFMED-SGVFAVIAENRGGKAKCSANLVV 1729
+ ++L + ++ F A+N G L+
Sbjct: 262 YSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 312
Score = 97.9 bits (243), Expect = 6e-22
Identities = 40/303 (13%), Positives = 86/303 (28%), Gaps = 77/303 (25%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGK--PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGE 481
+ C L P N+ + + W+ + P+ + ++ + + DSG
Sbjct: 20 NEIDVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQASRIHQHKE--KLWFVPAKVEDSGH 76
Query: 482 YVCRAWN---------NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC----RL 528
Y C N + F+ P + + + +P AG C
Sbjct: 77 YYCVVRNSSYCLRIKISAKFVENEPNLCY-----NAQAIFKQKLPVAGDGGLVCPYMEFF 131
Query: 529 EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG-- 586
+ +++ ++ W+ + +P + + L + V + G Y C A+ +
Sbjct: 132 KNENNELPKLQWYKDCKPLLLDNIHFSGVKD---RLIVMNVAEKHRGNYTCHASYTYLGK 188
Query: 587 ----TAMTKAKVI-----------------------------CKVL---TVIVEWFYNGK 610
T + + + C V + I W +NG
Sbjct: 189 QYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGS 248
Query: 611 KL---------PHGHRYRTFHDFGIVILDILY----CYEENSGVYECRATNKYGSDVTKA 657
+ + + ++ +L + C A N +G D
Sbjct: 249 VIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYI 308
Query: 658 SLK 660
L
Sbjct: 309 QLI 311
Score = 93.2 bits (231), Expect = 2e-20
Identities = 42/340 (12%), Positives = 77/340 (22%), Gaps = 110/340 (32%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
P ED G Y C N S K +
Sbjct: 65 WFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCY------------------- 105
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFEC---- 938
L +A C
Sbjct: 106 ----------------------------------NAQAIFKQKLPVAGD--GGLVCPYME 129
Query: 939 RLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHG 998
N+ ++W+ + K L + + L + +V + G YTC A+ +
Sbjct: 130 FFKNENNELPKLQWYKDCKPLLLDNIHFSGVK---DRLIVMNVAEKHRGNYTCHASYTYL 186
Query: 999 EATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTS 1058
++ + +E KP PV S
Sbjct: 187 GKQYPITRVIE---------------------------------FITLEENKPTRPVIVS 213
Query: 1059 QLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS----- 1113
+ ++V ++ C + + W +NG V + +
Sbjct: 214 PANETMEVDLGSQIQLICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 271
Query: 1114 -------LDMDYVYARD-SGEYICRATNKWGTAMTKAKVI 1145
L++ + +R + C A N G ++I
Sbjct: 272 RSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 311
Score = 92.9 bits (230), Expect = 3e-20
Identities = 43/329 (13%), Positives = 81/329 (24%), Gaps = 90/329 (27%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 581
C L P ++ I W+ + + + L DSG Y C
Sbjct: 23 DVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVV 81
Query: 582 TNKWGTAMTKAKV-----------------------------ICKVLTVI---------V 603
N K +C + +
Sbjct: 82 RNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKL 141
Query: 604 EWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVS 663
+W+ + K L + + + ++++++ E++ G Y C A+ Y +
Sbjct: 142 QWYKDCKPLLLDNIHFSGVKDRLIVMNV---AEKHRGNYTCHASYTYLGKQYPITRVI-- 196
Query: 664 KTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGE 723
+ TLE+ R PV P + ++ G
Sbjct: 197 -------------------EFITLEENKPTR------------PVIVSPANETMEVDLGS 225
Query: 724 NAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTF------------CDFGFVILEISP 771
+T W WNG + +L IS
Sbjct: 226 QIQLICNVT--GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISE 283
Query: 772 VYPEDC-GQYSCRAYNDYGEAVTSASMKV 799
+ ++C A N +G +
Sbjct: 284 IESRFYKHPFTCFAKNTHGIDAAYIQLIY 312
Score = 88.6 bits (219), Expect = 7e-19
Identities = 36/329 (10%), Positives = 67/329 (20%), Gaps = 88/329 (26%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ I W+K+ + + S L + +DS Y C N
Sbjct: 33 EHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKI 92
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
+ K + L +++ +
Sbjct: 93 SAKFVE---------NEPNLCYNAQAIFKQKLP-----------------------VAGD 120
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
C N+ K++W+ + KP+ N +
Sbjct: 121 GGLVCPYMEFFKNE-------------NNELPKLQWYKDCKPLLLDNIHFSGVKDRLI-- 165
Query: 186 DIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE----- 240
+ V G Y C + L +F + + + P E
Sbjct: 166 -VMNVAEKHRGNYTCH--ASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVD 222
Query: 241 --------------------WFVNNKPLPAGAKF------------KTTHDFGYVALDIV 268
W N + L+I
Sbjct: 223 LGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNIS 282
Query: 269 GAYAED-SGIYTVKATNSKGSATTSGTLK 296
+ +T A N+ G L
Sbjct: 283 EIESRFYKHPFTCFAKNTHGIDAAYIQLI 311
Score = 85.9 bits (212), Expect = 6e-18
Identities = 50/373 (13%), Positives = 89/373 (23%), Gaps = 123/373 (32%)
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGK--PMKTGS 754
E + R+ + V E L P ++ K + W+ + P+ T
Sbjct: 2 EADKCKEREEKIILVSS-------ANEIDVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQ 53
Query: 755 RFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---- 810
R L P ED G Y C N S K + +
Sbjct: 54 ASRIHQHKE--KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIF 111
Query: 811 ---LPKGMEVFIS-------------------FHE-------------------ISPVYP 829
LP + + + + + V
Sbjct: 112 KQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAE 171
Query: 830 EDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHERED 889
+ G Y+C A Y + R I +
Sbjct: 172 KHRGNYTCHASYTYLGKQYPIT------RVIEFIT------------------------- 200
Query: 890 RTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTD-LTLAESTLAHFECRLTPTNDPSM 948
+EE+ P ++ + + + + C +T S
Sbjct: 201 -------------------LEENKPTRPVIVSPANETMEVDLGSQIQLICNVT--GQLSD 239
Query: 949 TVEWFHNGKALSAGSRIKTINDFGF------------VILEINDVYLRD-SGLYTCKATN 995
W NG + + + + +L I+++ R +TC A N
Sbjct: 240 IAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKN 299
Query: 996 KHGEATTSCKLTV 1008
HG +L
Sbjct: 300 THGIDAAYIQLIY 312
Score = 80.5 bits (198), Expect = 4e-16
Identities = 43/290 (14%), Positives = 64/290 (22%), Gaps = 86/290 (29%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L ED G Y C N K +
Sbjct: 63 KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA------KFV------------------- 97
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFEC----QLAPVGDP 1455
E + + Q + +L C +
Sbjct: 98 --------------------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE 137
Query: 1456 NMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
K++W+ + KPL N + + V + G Y C A+ Y
Sbjct: 138 LPKLQWYKDCKPLLLDNIH-FSGVKDRLIVMN--VAEKHRGNYTCHASYTYL-------- 186
Query: 1516 KTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVS-QPEAQKV 1574
G Y E + +E PV VS E +V
Sbjct: 187 ------GKQYPITR-------------------VIEFITLEENKPTRPVIVSPANETMEV 221
Query: 1575 QEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGK 1624
G + VTG W NG I + + E +
Sbjct: 222 DLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKR 271
Score = 75.5 bits (185), Expect = 2e-14
Identities = 42/340 (12%), Positives = 84/340 (24%), Gaps = 81/340 (23%)
Query: 107 DSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
D + NE C + P N+ + + W+ +
Sbjct: 4 DKCKEREEKIILVSSANEIDVRPCPLNP------------------NEHKGTITWYKDDS 45
Query: 167 --PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQW---------------------- 202
P+ + ++ + + DSG Y C
Sbjct: 46 KTPVSTEQASRIHQHKE--KLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNL 103
Query: 203 -----FVNNKPLPAG--AKFKTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFK 255
+ + LP + + + E +P +W+ + KPL
Sbjct: 104 CYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNE------LPKLQWYKDCKPLLLDNIHF 157
Query: 256 TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNY--PLFSLQ 313
+ L ++ + G YT A+ + T + P+
Sbjct: 158 SGVK---DRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSP 214
Query: 314 FQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTV----------- 360
+ G + G + + +NG I+ +
Sbjct: 215 ANETMEVDLGSQIQLICNVT----GQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANK 270
Query: 361 -HAFGMVVLEILGTKIED-TGVYTCRATNKWGQAEISVNL 398
+ + VL I + +TC A N G + L
Sbjct: 271 RRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQL 310
Score = 67.8 bits (165), Expect = 6e-12
Identities = 26/205 (12%), Positives = 51/205 (24%), Gaps = 52/205 (25%)
Query: 603 VEWFYNGKKLPHGHRYR---TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W+ + K P H + + E+SG Y C N K S
Sbjct: 38 ITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAK---VEDSGHYYCVVRNSSYCLRIKISA 94
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
K +E+ + L
Sbjct: 95 K-F--------------------------------------VENEPNLCYNAQAIFKQKL 115
Query: 720 REGENAHFE----ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPE 775
+ ++ K++W+ + KP+ + + L + V +
Sbjct: 116 PVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIHFSGVK---DRLIVMNVAEK 172
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQ 800
G Y+C A Y + ++
Sbjct: 173 HRGNYTCHASYTYLGKQYPITRVIE 197
Score = 65.5 bits (159), Expect = 3e-11
Identities = 34/214 (15%), Positives = 60/214 (28%), Gaps = 63/214 (29%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ + K++W+K+ PL L + S L + ++ YTC A+
Sbjct: 132 KNENNELPKLQWYKDCKPLLLDNIHFSGVK---DRLIVMNVAEKHRGNYTCHASYTYLGK 188
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLND-VEC 120
T IE LE+ K R PV +S N+ +E
Sbjct: 189 QYPITRVIE-----------------FITLEENKPTR----------PVIVSPANETMEV 221
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI------FHKNRV 174
+ C V W NG I ++
Sbjct: 222 DLGSQIQLICNVT-------------------GQLSDIAYWKWNGSVIDEDDPVLGEDYY 262
Query: 175 KMVSDFGF------VVMDIAYVQSHD-SGEYVCQ 201
+ + V++I+ ++S + C
Sbjct: 263 SVENPANKRRSTLITVLNISEIESRFYKHPFTCF 296
Score = 65.5 bits (159), Expect = 4e-11
Identities = 26/201 (12%), Positives = 45/201 (22%), Gaps = 54/201 (26%)
Query: 1329 FSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKG 1388
+ F L + V + +G Y C A + T I+
Sbjct: 152 LDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITR------VIEFITL---- 201
Query: 1389 MLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQ 1448
E K P V+ ++ + C
Sbjct: 202 -----------------------------EENKPTRPVIVSPANETMEVDLGSQIQLICN 232
Query: 1449 LAPVGDPNMKVEWFLNGKPLPHKNRF------------NPIYDFGYVAMNFGWVYPED-S 1495
+ G + W NG + + N +N +
Sbjct: 233 V--TGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYK 290
Query: 1496 GEYLCRATNLYGMDETRAILK 1516
+ C A N +G+D L
Sbjct: 291 HPFTCFAKNTHGIDAAYIQLI 311
Score = 49.0 bits (116), Expect = 8e-06
Identities = 44/345 (12%), Positives = 77/345 (22%), Gaps = 65/345 (18%)
Query: 1053 PPVFTSQLQDNLDVPEAGK-VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 1111
+ + + V A + C L P ++ I W+ + + +
Sbjct: 3 ADKCKEREEKIILVSSANEIDVRPCPLNP-NEHKGTITWYKDDSKTPVSTEQASRIHQHK 61
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELE 1171
L DSG Y C N K + E L + A ++L
Sbjct: 62 EKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISA-----KFVENEPNLCYNAQAIFKQKLP 116
Query: 1172 KNYT-----PEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--DSELSEYQKERANESTELE 1224
P E P+L WY L + L
Sbjct: 117 VAGDGGLVCPYMEFFKNENNELPKL-----------QWYKDCKPLLLDNIHFSGVKDRL- 164
Query: 1225 KHDIVTESQLPDS-------MSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEI-ESVTV 1276
IV K+ E I +E P ++ E++ V
Sbjct: 165 ---IVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEV 221
Query: 1277 QEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINI----------STAFLIFNFCLHA 1326
++ C+ ++
Sbjct: 222 DLGSQIQL--------------ICN---VTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSV 264
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPED-QGEYVCRAYNDHGEAFTKAT 1370
++ L+I + + + C A N HG
Sbjct: 265 ENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQ 309
Score = 44.3 bits (104), Expect = 2e-04
Identities = 11/77 (14%), Positives = 21/77 (27%), Gaps = 13/77 (16%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRST------------FDFGLVTLSINSLRA-DDSAIYTC 52
+ W NG + + + L+I+ + + +TC
Sbjct: 236 QLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTC 295
Query: 53 KATNLLGEAVSTCTLKI 69
A N G + L
Sbjct: 296 FAKNTHGIDAAYIQLIY 312
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold,
glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4
b.1.1.4 PDB: 2ncm_A 3ncm_A
Length = 191
Score = 115 bits (290), Expect = 3e-29
Identities = 30/203 (14%), Positives = 61/203 (30%), Gaps = 20/203 (9%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPL-PTIKWFRED---FPITSSPDFQIHTFST 1693
+ + F + GD I WF + +
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDD 60
Query: 1694 KSILIMRQVFMEDSGVFAVIAENR-GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
S L + ++D+G++ + G +++ + N+ + F +
Sbjct: 61 SSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI----------FQKLMFKNAPTPQ 110
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKII--PDIRYKTLEEDNLFTLLIIEAVVEDS 1810
G+ A + ++ P + W G+ +I D+R+ L + L I D
Sbjct: 111 EFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNN---YLQIRGIKKTDE 167
Query: 1811 GAYECVAMNNAGEARCEAELVVQ 1833
G Y C A ++ V
Sbjct: 168 GTYRCEGRILARGEINFKDIQVI 190
Score = 104 bits (260), Expect = 3e-25
Identities = 36/235 (15%), Positives = 64/235 (27%), Gaps = 53/235 (22%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGS-RIKTI-NDF 971
+ + P+ ++ F C+ + + WF NG+ LS RI + ND
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD 59
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATT-SCKLTVKGRQGIDVEPQVSAIFANATKN 1030
L I + + D+G+Y C T + G + + + +
Sbjct: 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQ-------------------- 99
Query: 1031 IQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 1090
+F + + E C + S I W
Sbjct: 100 ----------------------KLMFKNAPTP-QEFKEGEDAVIVC--DVVSSLPPTIIW 134
Query: 1091 FFNGRPFATGSRVK-TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
GR V+ V L + + D G Y C + +
Sbjct: 135 KHKGRDVILKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDI 187
Score = 91.4 bits (227), Expect = 6e-21
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 24/147 (16%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYK---TLEEDNL 1797
S I+VG+ F +++ K D+ W + + + + +D+
Sbjct: 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDS 61
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEA-RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
TL I A ++D+G Y+CV G + + +
Sbjct: 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF-------------------QKLM 102
Query: 1857 VAEPLKDQNVKEGSAVTLKCRITGKPR 1883
Q KEG + C +
Sbjct: 103 FKNAPTPQEFKEGEDAVIVCDVVSSLP 129
Score = 91.0 bits (226), Expect = 8e-21
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 16/147 (10%)
Query: 347 NGKPIEAS-HRIRTVHAFGMV-VLEILGTKIEDTGVYTCRATNKWG-QAEISVNLECVDK 403
NG+ + + RI V L I I+D G+Y C T + G Q+E +VN++
Sbjct: 41 NGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF-- 98
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN--RVKMV 461
Q F + E K+G+ A C V+ + W H G+ + K R ++
Sbjct: 99 ---QKLMFKNAPTPQE-FKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVRFIVL 152
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRAWN 488
S+ + I ++ D G Y C
Sbjct: 153 SN-N--YLQIRGIKKTDEGTYRCEGRI 176
Score = 90.3 bits (224), Expect = 2e-20
Identities = 29/190 (15%), Positives = 52/190 (27%), Gaps = 24/190 (12%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPR-PRVMWLINGHTIVNEIVRKITATETTEME 1620
P ++ GE F C +V G + + W ++ ++I+ +
Sbjct: 3 LQVDIVPSQGEISVGESKFFLC-QVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDS 61
Query: 1621 HKGKIQE-RVVDA--------------SEKPAK-----PPVFTKKIQPCRAFEQDQARFE 1660
I + DA SE +F P E + A
Sbjct: 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIV 121
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+ PTI W + + D + S + I R + D G +
Sbjct: 122 CDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQI-RGIKKTDEGTYRCEGRILARG 180
Query: 1721 AKCSANLVVE 1730
++ V
Sbjct: 181 EINFKDIQVI 190
Score = 78.3 bits (193), Expect = 3e-16
Identities = 29/186 (15%), Positives = 56/186 (30%), Gaps = 48/186 (25%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFL-NGKPL-PHKNRFNPIYD 1479
+ + I + + +S F CQ + + WF NG+ L P++ R + +++
Sbjct: 1 RVLQV--DIVPSQGEISVGESKFFLCQ-VAGDAKDKDISWFSPNGEKLSPNQQRISVVWN 57
Query: 1480 FGYV-AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEK 1538
+ +D+G Y C T G +
Sbjct: 58 DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI-------------------- 97
Query: 1539 IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLI 1598
+ +F + P Q+ +EGE A V P ++W
Sbjct: 98 ---------------------FQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH 136
Query: 1599 NGHTIV 1604
G ++
Sbjct: 137 KGRDVI 142
Score = 77.9 bits (192), Expect = 3e-16
Identities = 41/197 (20%), Positives = 60/197 (30%), Gaps = 64/197 (32%)
Query: 11 IEWFK-NGVPLSLGS-RIRSTF-DFGLVTLSINSLRADDSAIYTCKATNLLGEAVS-TCT 66
I WF NG LS RI + D TL+I + DD+ IY C T G T
Sbjct: 35 ISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVN 94
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+K +F +F + E KE E+
Sbjct: 95 VK------------------------------------IFQKLMFKNAPTPQEFKEGEDA 118
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN--RVKMVSDFGFVV 184
C V + W H G+ + K R ++S+
Sbjct: 119 VIVCDVV---------S----------SLPPTIIWKHKGRDVILKKDVRFIVLSN-N--Y 156
Query: 185 MDIAYVQSHDSGEYVCQ 201
+ I ++ D G Y C+
Sbjct: 157 LQIRGIKKTDEGTYRCE 173
Score = 76.4 bits (188), Expect = 1e-15
Identities = 34/221 (15%), Positives = 65/221 (29%), Gaps = 62/221 (28%)
Query: 592 AKVICKV----LTVIVEWFY-NGKKLP--HGHRYRTFHDFGIVILDILYCYEENSGVYEC 644
+C+V + WF NG+KL ++D L I +++G+Y+C
Sbjct: 20 KFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79
Query: 645 RATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHR 704
T + G+ T +++
Sbjct: 80 VVTAEDGTQSEA-----------------------------------------TVNVKIF 98
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
Q +F + + +EGE+A + W G+ + R F
Sbjct: 99 QKLMFKNAPTPQE-FKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVR------F 149
Query: 765 VI-----LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
++ L+I + D G Y C + ++V
Sbjct: 150 IVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVI 190
Score = 72.5 bits (178), Expect = 2e-14
Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 7/95 (7%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDFGF 973
F PT E A C + T+ W H G+ + R +++
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY- 156
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
L+I + D G Y C+ + V
Sbjct: 157 --LQIRGIKKTDEGTYRCEGRILARGEINFKDIQV 189
Score = 69.5 bits (170), Expect = 3e-13
Identities = 30/192 (15%), Positives = 57/192 (29%), Gaps = 40/192 (20%)
Query: 505 RLPS--PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPF-ATGSRVKTVY-DF 559
R+ ++ F C++ I WF NG R+ V+ D
Sbjct: 1 RVLQVDIVPSQGEISVGESKFFLCQV-AGDAKDKDISWFSPNGEKLSPNQQRISVVWNDD 59
Query: 560 GFISLDMDYVYARDSGEYICRATNKWGTAMTK--------------------------AK 593
+L + D+G Y C T + GT A
Sbjct: 60 DSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAV 119
Query: 594 VICKVL---TVIVEWFYNGKKLPH--GHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
++C V+ + W + G+ + R+ + + I I + + G Y C
Sbjct: 120 IVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIK---KTDEGTYRCEGRI 176
Query: 649 KYGSDVTKASLK 660
++ ++
Sbjct: 177 LARGEINFKDIQ 188
Score = 67.9 bits (166), Expect = 9e-13
Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 17/168 (10%)
Query: 237 PFTEWF-VNNKPLPAGAK--FKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATT-S 292
WF N + L + +D L I A +D+GIY T G+ + +
Sbjct: 33 KDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIE 352
+K ++ +F EGE A V T+ + + G+ +
Sbjct: 93 VNVKIFQK-------LMFKNAPTPQE-FKEGEDAVIVCD--VVSSLPPTIIWKHKGRDVI 142
Query: 353 ASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+R V + L+I G K D G Y C +++
Sbjct: 143 LKKDVRFIVLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188
Score = 66.8 bits (163), Expect = 2e-12
Identities = 30/193 (15%), Positives = 55/193 (28%), Gaps = 45/193 (23%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLK-VEWF-WNGKPMKTGSRFRT--FC 760
+ + S + + GE+ F + D K K + WF NG+ + + + +
Sbjct: 1 RVLQVDIVPSQGE-ISVGESKFFLCQ--VAGDAKDKDISWFSPNGEKLSPNQQRISVVWN 57
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ---LPKGME 816
D L I +D G Y C + G + ++K+ K +G +
Sbjct: 58 DDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGED 117
Query: 817 VFIS-------------FHE---------------------ISPVYPEDCGQYSCRAYND 842
I H+ I + D G Y C
Sbjct: 118 AVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRIL 177
Query: 843 YGEAVTSASMKVQ 855
+ ++V
Sbjct: 178 ARGEINFKDIQVI 190
Score = 61.4 bits (149), Expect = 2e-10
Identities = 22/180 (12%), Positives = 38/180 (21%), Gaps = 57/180 (31%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L I +D G Y C + G T+ ++
Sbjct: 63 TLTIYNANIDDAGIYKCVVTAEDGTQSEA---------TVNVKIFQK------------- 100
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQST-KFECQLAPVGDPNMK 1458
F Q + C V
Sbjct: 101 -------------------------LMFK--NAPTPQEFKEGEDAVIVCD--VVSSLPPT 131
Query: 1459 VEWFLNGKPLPHKN--RFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ W G+ + K RF + + + D G Y C L + ++
Sbjct: 132 IIWKHKGRDVILKKDVRFIVLSNNYLQIRG---IKKTDEGTYRCEGRILARGEINFKDIQ 188
Score = 55.6 bits (134), Expect = 1e-08
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 1/69 (1%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ + I W G + L +R L I ++ D Y C+ L
Sbjct: 123 DVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN-NYLQIRGIKKTDEGTYRCEGRILARGE 181
Query: 62 VSTCTLKIE 70
++ +++
Sbjct: 182 INFKDIQVI 190
Score = 51.7 bits (124), Expect = 3e-07
Identities = 28/210 (13%), Positives = 55/210 (26%), Gaps = 46/210 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH-NGKP 167
+ E E+ F C+V + + + WF NG+
Sbjct: 3 LQVDIVPSQGEISVGESKFFLCQV------------------AGDAKDKDISWFSPNGEK 44
Query: 168 IF-HKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFG-YV 224
+ ++ R+ +V + + I D+G Y C V + G + + T + +
Sbjct: 45 LSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV--VTAE---DGTQSEATVNVKIFQ 99
Query: 225 ALDIELMLKTLV------------------PFTEWFVNNKPLPAGAKFKTTHDFGYVALD 266
L + P W + + + L
Sbjct: 100 KLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNY-LQ 158
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
I G D G Y + ++
Sbjct: 159 IRGIKKTDEGTYRCEGRILARGEINFKDIQ 188
Score = 39.0 bits (91), Expect = 0.005
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
I +D G Y C + G + ++K+ K P E + A +
Sbjct: 66 IYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNA---PTPQEFKEGEDAVIV 121
Score = 37.9 bits (88), Expect = 0.014
Identities = 14/117 (11%), Positives = 20/117 (17%), Gaps = 34/117 (29%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRV----EPRVD---PRLRVECSLSTAFFFPFINIST 1315
+ F +E E V P + V F
Sbjct: 99 QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFI-------- 150
Query: 1316 AFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+ L I + D+G Y C I
Sbjct: 151 -----------------VLSNN--YLQIRGIKKTDEGTYRCEGRILARGEINFKDIQ 188
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain,
beta-sandwhich, I-SET, structural protein; 2.10A {Homo
sapiens} SCOP: b.1.1.4
Length = 99
Score = 111 bits (280), Expect = 5e-29
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI-NDFGF 973
+AP+ T+ + + AHF R+ DP EW+ NG + RI +
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDP--ECEWYKNGVKIERSDRIYWYWPEDNV 61
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L I DV DS KA N GE ++ L V+ +
Sbjct: 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 105 bits (264), Expect = 6e-27
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST-K 1694
+ P ++IQ + A F V G P P +W++ I S +
Sbjct: 2 SMEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNV 61
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L++R V EDS V A N G+ A L+V+ K
Sbjct: 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 100 bits (250), Expect = 5e-25
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT-FCDFG 763
+AP + + + +G +AHF R+ P + EW+ NG ++ R + +
Sbjct: 4 EAPKIFERIQSQT-VGQGSDAHFRVRVVG--KPDPECEWYKNGVKIERSDRIYWYWPEDN 60
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L I V ED +A N GE + A + VQ K
Sbjct: 61 VCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 99.3 bits (248), Expect = 1e-24
Identities = 31/95 (32%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL-EEDNLFTL 1800
P I S + G A F ++ + W KNG KI R EDN+ L
Sbjct: 5 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCEL 64
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+I + EDS + A+N AGE A L+VQ+K
Sbjct: 65 VIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 82.7 bits (205), Expect = 6e-19
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGF 1111
P ++Q V + HF R+ K DP +W+ NG R+ + +
Sbjct: 5 APKIFERIQS-QTVGQGSDAHFRVRVVGKPDPE--CEWYKNGVKIERSDRIYWYWPEDNV 61
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + V DS + +A N G + A ++ +AK
Sbjct: 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 81.5 bits (202), Expect = 2e-18
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P+ + EW+KNGV + RI + + + L I + +DSA KA N+ GE
Sbjct: 30 VGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETS 89
Query: 63 STCTLKIEDR 72
S L ++ +
Sbjct: 90 SHAFLLVQAK 99
Score = 77.7 bits (192), Expect = 4e-17
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 1421 KKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY-D 1479
+ P+ +I++Q + + F ++ VG P+ + EW+ NG + +R + +
Sbjct: 2 SMEAPKIFERIQSQT-VGQGSDAHFRVRV--VGKPDPECEWYKNGVKIERSDRIYWYWPE 58
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGK 1520
+ V EDS + +A N+ G + A L K
Sbjct: 59 DNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 99
Score = 76.2 bits (188), Expect = 1e-16
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV-SDFG 465
+ PK I+S + G AHF + P+ + EW+ NG I +R+ +
Sbjct: 4 EAPKIFERIQSQT-VGQGSDAHFRVRVVG--KPDPECEWYKNGVKIERSDRIYWYWPEDN 60
Query: 466 FVVMDIAYVQSHDSGEYVCRAWN 488
+ I V DS + +A N
Sbjct: 61 VCELVIRDVTGEDSASIMVKAIN 83
Score = 70.8 bits (174), Expect = 1e-14
Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 20/94 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + + + HF RV GK P+ + EW+ NG I
Sbjct: 6 PKIFERIQSQTVGQGSDAHFRVRVV---------GK----------PDPECEWYKNGVKI 46
Query: 169 FHKNRVKMV-SDFGFVVMDIAYVQSHDSGEYVCQ 201
+R+ + + I V DS + +
Sbjct: 47 ERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80
Score = 69.2 bits (170), Expect = 3e-14
Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGFISLDMDYVYA 571
+ V + HF R+ K DP +W+ NG R+ + + L + V
Sbjct: 14 SQTVGQGSDAHFRVRVVGKPDPE--CEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTG 71
Query: 572 RDSGEYICRATNKWGTAMTKAKVICK 597
DS + +A N G + A ++ +
Sbjct: 72 EDSASIMVKAINIAGETSSHAFLLVQ 97
Score = 67.7 bits (166), Expect = 1e-13
Identities = 21/126 (16%), Positives = 31/126 (24%), Gaps = 48/126 (38%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTA 1305
E P+ I+S TV + F RV +P R+
Sbjct: 2 SMEAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWP---- 57
Query: 1306 FFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ L I V ED + +A N GE
Sbjct: 58 -----------------------------EDNVCELVIRDVTGEDSASIMVKAINIAGET 88
Query: 1366 FTKATI 1371
+ A +
Sbjct: 89 SSHAFL 94
Score = 63.4 bits (155), Expect = 4e-12
Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Query: 603 VEWFYNGKKLPHGHRYRT-FHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
EW+ NG K+ R + + + L I E+S +A N G + A L
Sbjct: 37 CEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLV 96
Query: 662 VSK 664
+K
Sbjct: 97 QAK 99
Score = 63.1 bits (154), Expect = 4e-12
Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 8/95 (8%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTV-HAFG 364
P + + + + +G AHF + VG E+ NG IE S RI
Sbjct: 6 PKIF---ERIQSQTVGQGSDAHFRVRV--VGKPDPECEWYKNGVKIERSDRIYWYWPEDN 60
Query: 365 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ L I ED+ +A N G+ L
Sbjct: 61 VCELVIRDVTGEDSASIMVKAINIAGETSSHAFLL 95
Score = 61.9 bits (151), Expect = 1e-11
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Query: 240 EWFVNNKPLPAGAKFKT-THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
EW+ N + + + L I EDS VKA N G ++ L
Sbjct: 38 EWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQ 97
Query: 299 ER 300
+
Sbjct: 98 AK 99
Score = 60.4 bits (147), Expect = 4e-11
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
EAP + ++Q V +G A F RV G P P W NG I
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIER 48
Score = 46.1 bits (110), Expect = 4e-06
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
EAP + E ++ Q V +GS + R+ GKP
Sbjct: 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPD 34
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular
adhesion, ligand-independent DIME mutational analysis,
transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1
b.1.1.4
Length = 182
Score = 114 bits (286), Expect = 7e-29
Identities = 31/200 (15%), Positives = 56/200 (28%), Gaps = 24/200 (12%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI-- 1696
+ + +G P I+W ++ + + I I
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
L ++ V D+G + E+ G L VE P F +
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE----------GVPFFTVEPKDLAVP 111
Query: 1756 VGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYE 1814
+ + +P+ + W + KI + L + V S +
Sbjct: 112 PNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGP-------APSPSVLNVTG--VTQSTMFS 162
Query: 1815 CVAMNNAGEARCE-AELVVQ 1833
C A N G A A + +Q
Sbjct: 163 CEAHNLKGLASSRTATVHLQ 182
Score = 97.6 bits (243), Expect = 4e-23
Identities = 36/234 (15%), Positives = 66/234 (28%), Gaps = 60/234 (25%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+ + P LT+++ C ++W +G + ++ I
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCS--VEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWI 59
Query: 976 --LEINDVYLRDSGLYTCKATNKHGEATT-SCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
L + V D+G Y C+ + + LTV+G
Sbjct: 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEG---------------------- 97
Query: 1033 KLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWF 1091
P FT + +D L VP C E P + I W+
Sbjct: 98 --------------------VPFFTVEPKD-LAVPPNAPFQLSC--EAVGPPEPVTIVWW 134
Query: 1092 FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ +V +++ S + C A N G A ++ +
Sbjct: 135 RGTTKIGGPAPSPSV-----LNV----TGVTQSTMFSCEAHNLKGLASSRTATV 179
Score = 90.2 bits (224), Expect = 2e-20
Identities = 22/145 (15%), Positives = 41/145 (28%), Gaps = 22/145 (15%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD--IRYKTLEEDNLFT 1799
+ ++ GQ + + + + D+ W+K+G + + E+ +
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGF 61
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEA-RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L + D+G Y C + L V+ P
Sbjct: 62 LSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE-------------------GVPFFT 102
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
KD V + L C G P
Sbjct: 103 VEPKDLAVPPNAPFQLSCEAVGPPE 127
Score = 87.9 bits (218), Expect = 1e-19
Identities = 36/191 (18%), Positives = 63/191 (32%), Gaps = 32/191 (16%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATET---- 1616
+ P V +G+P + C V G P + W+ +G + N I +E
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNC-SVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIG 60
Query: 1617 ------TEMEHKGK----IQERVVDASEKPAK-----PPVFTKKIQPCRAFEQDQARFEV 1661
E G+ +++ +P P FT + + +
Sbjct: 61 FLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSC 120
Query: 1662 EFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
E G P P TI W+R I S ++ + S +F+ A N G
Sbjct: 121 EAVGPPEPVTIVWWRGTTKIGGPAP---------SPSVLNVTGVTQSTMFSCEAHNLKGL 171
Query: 1721 AKC-SANLVVE 1730
A +A + ++
Sbjct: 172 ASSRTATVHLQ 182
Score = 82.2 bits (203), Expect = 1e-17
Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 44/211 (20%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFG 465
K L + G C++ E ++W +G + + + +
Sbjct: 2 GLKLMGAPVKLTVSQ-GQPVKLNCSVE--GMEEPDIQWVKDGAVVQNLDQLYIPVSEQHW 58
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNL 514
+ + V+ D+G Y C+ + + PF F P +L
Sbjct: 59 IGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPF--FTVE------PK--DL 108
Query: 515 DVPEAGKVHFDCRLEPKSDPT-MRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARD 573
VP C E P + I W+ + +V +++
Sbjct: 109 AVPPNAPFQLSC--EAVGPPEPVTIVWWRGTTKIGGPAPSPSV-----LNV----TGVTQ 157
Query: 574 SGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
S + C A N G A ++ TV ++
Sbjct: 158 STMFSCEAHNLKGLASSRT------ATVHLQ 182
Score = 79.1 bits (195), Expect = 9e-17
Identities = 25/184 (13%), Positives = 49/184 (26%), Gaps = 49/184 (26%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ + V Q K C G ++W +G + + ++ +
Sbjct: 2 GLKLMGA--PVKLTVSQGQPVKLNCS--VEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQH 57
Query: 1483 V--AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
++ V D+G Y C+ + + ++ + T
Sbjct: 58 WIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLT----------------------- 94
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP-RVMWLIN 1599
VE P F +P+ V P + G P P ++W
Sbjct: 95 -------------VE-----GVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRG 136
Query: 1600 GHTI 1603
I
Sbjct: 137 TTKI 140
Score = 76.8 bits (189), Expect = 6e-16
Identities = 23/150 (15%), Positives = 42/150 (28%), Gaps = 29/150 (19%)
Query: 347 NGKPIEASHRIRTVHAFGMVV--LEILGTKIEDTGVYTCRATNKWGQ-----AEISVNLE 399
+G ++ ++ + + L + + D G Y C+ + ++V
Sbjct: 39 DGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVE-- 96
Query: 400 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEWFHNGKPIFHKNRV 458
P FT K L + C V PE + + W+ I
Sbjct: 97 -------GVPFFTVEPKDLA-VPPNAPFQLSC--EAVGPPEPVTIVWWRGTTKIGGPAPS 146
Query: 459 KMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
V + S + C A N
Sbjct: 147 PSV---------LNVTGVTQSTMFSCEAHN 167
Score = 75.2 bits (185), Expect = 2e-15
Identities = 25/199 (12%), Positives = 45/199 (22%), Gaps = 66/199 (33%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDSAIYTCKATNLLGEAVS 63
I+W K+G + ++ LS+ S+ D+ Y C+ + +S
Sbjct: 29 MEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
+ + V P F D+ N
Sbjct: 89 -QPVWLT----------------------------------VEGVPFFTVEPKDLAVPPN 113
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPE-LKVEWFHNGKPIFHKNRVKMVSDFGF 182
C G PE + + W+ I V
Sbjct: 114 APFQLSCEAV---------G----------PPEPVTIVWWRGTTKIGGPAPSPSV----- 149
Query: 183 VVMDIAYVQSHDSGEYVCQ 201
+ S + C+
Sbjct: 150 ----LNVTGVTQSTMFSCE 164
Score = 73.7 bits (181), Expect = 8e-15
Identities = 30/257 (11%), Positives = 61/257 (23%), Gaps = 85/257 (33%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINISTAFLIF 1320
+ + +TV + +PV+ VE +P ++ +
Sbjct: 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNL--------------- 46
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
++ L + V D G Y C+ + ++ +
Sbjct: 47 -----DQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQ---------PVW 92
Query: 1381 LQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM 1440
L + P F + +D V
Sbjct: 93 LTVEGV--------------------------------------PFFTVEP--KDLAVPP 112
Query: 1441 -QSTKFECQLAPVGDP-NMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEY 1498
+ C+ VG P + + W+ + + S +
Sbjct: 113 NAPFQLSCE--AVGPPEPVTIVWWRGTTKIGGPAPSPSV---------LNVTGVTQSTMF 161
Query: 1499 LCRATNLYGMDETRAIL 1515
C A NL G+ +R
Sbjct: 162 SCEAHNLKGLASSRTAT 178
Score = 72.9 bits (179), Expect = 2e-14
Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 37/184 (20%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
+ + +G+ + ++W +G ++ +
Sbjct: 2 GLKLMGAPVKLT-VSQGQPVKLNCS--VEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHW 58
Query: 766 I--LEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ---LPKGMEVFI 819
I L + V D G+Y C+ + ++ + V+G +E + +P +
Sbjct: 59 IGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQL 118
Query: 820 ---------------------------SFHEISPVYPEDCGQYSCRAYNDYGEAVT-SAS 851
S ++ +SC A+N G A + +A+
Sbjct: 119 SCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSRTAT 178
Query: 852 MKVQ 855
+ +Q
Sbjct: 179 VHLQ 182
Score = 69.4 bits (170), Expect = 2e-13
Identities = 21/202 (10%), Positives = 56/202 (27%), Gaps = 57/202 (28%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVI--LDILYCYEENSGVYECRATNKYGSDVTKASLK 660
++W +G + + + I L + ++G Y C+ + +++++
Sbjct: 34 IQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQ---- 89
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
+ P FTV ++ +
Sbjct: 90 -------------------------------------PVWLTVEGVPFFTVEPKDLA-VP 111
Query: 721 EGENAHFEARLTPTDDPK-LKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
P+ + + W+ + + ++
Sbjct: 112 PNAPFQLSCE--AVGPPEPVTIVWWRGTTKIGGPAPSP---------SVLNVTGVTQSTM 160
Query: 780 YSCRAYNDYGEAVT-SASMKVQ 800
+SC A+N G A + +A++ +Q
Sbjct: 161 FSCEAHNLKGLASSRTATVHLQ 182
Score = 66.0 bits (161), Expect = 4e-12
Identities = 16/95 (16%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P F P DL + + C +P +T+ W+ + + ++
Sbjct: 98 VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEP-VTIVWWRGTTKIGGPAPSPSV------- 149
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSC-KLTVK 1009
+N + S +++C+A N G A++ + ++
Sbjct: 150 --LNVTGVTQSTMFSCEAHNLKGLASSRTATVHLQ 182
Score = 65.6 bits (160), Expect = 4e-12
Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 21/160 (13%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYV--ALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
P +W + + + + L + D+G Y + + + +
Sbjct: 32 PDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPV 91
Query: 295 LKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGD-QTMTVEFLYNGKPIEA 353
L V P F+++ + L + VG + +T+ + I
Sbjct: 92 -----WLTV-EGVPFFTVEPKDL-AVPPNAPFQLSCE--AVGPPEPVTIVWWRGTTKIGG 142
Query: 354 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+V L + G + + +++C A N G A
Sbjct: 143 PAPSPSV-------LNVTG--VTQSTMFSCEAHNLKGLAS 173
Score = 64.8 bits (158), Expect = 8e-12
Identities = 24/178 (13%), Positives = 48/178 (26%), Gaps = 45/178 (25%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI--SLDMDYVY 570
L V + V +C + I W +G ++ L + V
Sbjct: 11 KLTVSQGQPVKLNCS--VEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVE 68
Query: 571 ARDSGEYICRATNKWGTAMTK-AKVI-------------------------CKV----LT 600
D+G Y C+ + T +++ + C+
Sbjct: 69 RSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEP 128
Query: 601 VIVEWFYNGKKLPH-GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKA 657
V + W+ K+ + G+ S ++ C A N G ++
Sbjct: 129 VTIVWWRGTTKIGGPAPSPSVLNVTGV----------TQSTMFSCEAHNLKGLASSRT 176
Score = 59.8 bits (145), Expect = 4e-10
Identities = 26/206 (12%), Positives = 57/206 (27%), Gaps = 55/206 (26%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + + + V +C VE G E ++W +G +
Sbjct: 3 LKLMGAPVKLTVSQGQPVKLNCSVE---------G----------MEEPDIQWVKDGAVV 43
Query: 169 --FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH------- 219
+ + + + + V+ D+G Y CQ V + +
Sbjct: 44 QNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQ--VEDG---GETEISQPVWLTVEGV 98
Query: 220 -DFGYVALDIELMLKTLVPFT------------EWFVNNKPLPAGAKFKTTHDFGYVALD 266
F D+ + + W+ + L+
Sbjct: 99 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIG-------GPAPSPSVLN 151
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTS 292
+ G S +++ +A N KG A++
Sbjct: 152 VTG--VTQSTMFSCEAHNLKGLASSR 175
Score = 49.8 bits (119), Expect = 1e-06
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 11/71 (15%)
Query: 2 EPRADP-NLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
E P + I W++ + + S +N S +++C+A NL G
Sbjct: 121 EAVGPPEPVTIVWWRGTTKIGGPAPSPSV---------LNVTGVTQSTMFSCEAHNLKGL 171
Query: 61 AVS-TCTLKIE 70
A S T T+ ++
Sbjct: 172 ASSRTATVHLQ 182
Score = 41.7 bits (98), Expect = 6e-04
Identities = 14/75 (18%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 808 ESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQL 866
+ +P + +I F + V D G+Y C+ + ++ + V+G +E
Sbjct: 48 QLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVE--- 104
Query: 867 PKGMEGTIDKIAELE 881
PK + + +L
Sbjct: 105 PKDLAVPPNAPFQLS 119
Score = 37.5 bits (87), Expect = 0.015
Identities = 14/112 (12%), Positives = 25/112 (22%), Gaps = 35/112 (31%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
E P F E + + V P + +P
Sbjct: 96 EGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEP--------------------------- 128
Query: 1322 FCLHAVIF----SHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKA 1369
I + I ++ + C A+N G A ++
Sbjct: 129 ----VTIVWWRGTTKIGGPAPSPSVLNVTGVTQSTMFSCEAHNLKGLASSRT 176
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion
comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Length = 201
Score = 113 bits (285), Expect = 2e-28
Identities = 33/198 (16%), Positives = 60/198 (30%), Gaps = 6/198 (3%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFE--VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
P ++ R E + + +W +FP+ + D + T
Sbjct: 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGN 67
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
L + V D G ++ + + + P + +
Sbjct: 68 LYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALM 127
Query: 1757 GQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECV 1816
GQ + D+ W K + + T L I +ED G YEC
Sbjct: 128 GQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIST--SGA--VLKIFNIQLEDEGIYECE 183
Query: 1817 AMNNAGEARCEAELVVQS 1834
A N G+ + +A + VQ+
Sbjct: 184 AENIRGKDKHQARIYVQA 201
Score = 101 bits (252), Expect = 4e-24
Identities = 37/234 (15%), Positives = 64/234 (27%), Gaps = 43/234 (18%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDFGFV 974
P ++ + E C ++ W N + + R G
Sbjct: 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG-- 66
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
L I +V D G Y+C ++ + K + P
Sbjct: 67 NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIP-----LIPIP---------------- 105
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
KP P Q +D + V +C +P I W
Sbjct: 106 -----------ERTTKPYPADIVVQFKD-VYALMGQNVTLEC--FALGNPVPDIRWRKVL 151
Query: 1095 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKA 1148
P + + + + L + + D G Y C A N G +A++ +A
Sbjct: 152 EPMPSTAEI-STSGA---VLKIFNIQLEDEGIYECEAENIRGKDKHQARIYVQA 201
Score = 96.1 bits (239), Expect = 2e-22
Identities = 36/196 (18%), Positives = 65/196 (33%), Gaps = 32/196 (16%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR-VMWLINGHTI-VNEIVRKITATET--- 1616
P + +V+EG+ C +P WL+N + + R+ +
Sbjct: 9 PFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNL 68
Query: 1617 ----TEMEHKGK------------------IQERVVDASEKPAKPPVFTKKIQPCRAFEQ 1654
E KG I + P + + A
Sbjct: 69 YIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMG 128
Query: 1655 DQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 1714
E G+P+P I+W + P+ S+ + ++L + + +ED G++ A
Sbjct: 129 QNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS----GAVLKIFNIQLEDEGIYECEA 184
Query: 1715 ENRGGKAKCSANLVVE 1730
EN GK K A + V+
Sbjct: 185 ENIRGKDKHQARIYVQ 200
Score = 92.6 bits (230), Expect = 3e-21
Identities = 27/149 (18%), Positives = 42/149 (28%), Gaps = 17/149 (11%)
Query: 1739 GVVPPSFLTTISSAVINVGQLARF--DAKISATKPLDVYWLKNGKKIIPDI---RYKTLE 1793
G + P + G+ D L WL N + + R+ +
Sbjct: 5 GYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQT 64
Query: 1794 EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDE 1853
NL+ I D G Y C + + ++ + P P
Sbjct: 65 NGNLY---IANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYP-------- 113
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ KD G VTL+C G P
Sbjct: 114 -ADIVVQFKDVYALMGQNVTLECFALGNP 141
Score = 87.6 bits (217), Expect = 2e-19
Identities = 35/201 (17%), Positives = 61/201 (30%), Gaps = 23/201 (11%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHK--NRVKMVSDFG 465
P + +K+G C +L W N P+F R + G
Sbjct: 8 DPFPPEERPEVR-VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 66
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNL 514
+ IA V++ D G Y C + + P + + +D +
Sbjct: 67 --NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKD-V 123
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS 574
V +C +P I W P + + + + L + + D
Sbjct: 124 YALMGQNVTLEC--FALGNPVPDIRWRKVLEPMPSTAEI-STSGA---VLKIFNIQLEDE 177
Query: 575 GEYICRATNKWGTAMTKAKVI 595
G Y C A N G +A++
Sbjct: 178 GIYECEAENIRGKDKHQARIY 198
Score = 81.9 bits (202), Expect = 2e-17
Identities = 26/187 (13%), Positives = 48/187 (25%), Gaps = 55/187 (29%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
I+ V D G YSC + + P
Sbjct: 70 IANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYP---------------- 113
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
+ + D+ EC
Sbjct: 114 ---------------------------------ADIVVQFKDVYALMGQNVTLECF--AL 138
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+P + W + + + + I T +L+I ++ L D G+Y C+A N G+
Sbjct: 139 GNPVPDIRWRKVLEPMPSTAEISTSGA----VLKIFNIQLEDEGIYECEAENIRGKDKHQ 194
Query: 1004 CKLTVKG 1010
++ V+
Sbjct: 195 ARIYVQA 201
Score = 79.9 bits (197), Expect = 7e-17
Identities = 31/201 (15%), Positives = 52/201 (25%), Gaps = 39/201 (19%)
Query: 601 VIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ W N + R F L I + G Y C ++ + +
Sbjct: 40 LSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFI 99
Query: 661 CVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLR 720
+ V ++
Sbjct: 100 PL--------------------------------IPIPERTTKPYPADIVVQFKDVY-AL 126
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
G+N E +P + W +PM + + T +L+I + ED G Y
Sbjct: 127 MGQNVTLECF--ALGNPVPDIRWRKVLEPMPSTAEISTSGA----VLKIFNIQLEDEGIY 180
Query: 781 SCRAYNDYGEAVTSASMKVQG 801
C A N G+ A + VQ
Sbjct: 181 ECEAENIRGKDKHQARIYVQA 201
Score = 76.5 bits (188), Expect = 1e-15
Identities = 42/259 (16%), Positives = 69/259 (26%), Gaps = 76/259 (29%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFC 1323
P E V V+E + + L +L+ F
Sbjct: 8 DPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSY-----------------RWLLNEFP 50
Query: 1324 LHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQN 1383
+ + +L I V D+G Y C + + I L
Sbjct: 51 VFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFS-------KFIPLIP 103
Query: 1384 QVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QS 1442
+ K P V Q +D M Q+
Sbjct: 104 IPERTT-------------------------------KPYPADIVVQ--FKDVYALMGQN 130
Query: 1443 TKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP------IYDFGYVAMNFGWVYPEDSG 1496
EC +G+P + W +P+P + I++ + ED G
Sbjct: 131 VTLECF--ALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFN----------IQLEDEG 178
Query: 1497 EYLCRATNLYGMDETRAIL 1515
Y C A N+ G D+ +A +
Sbjct: 179 IYECEAENIRGKDKHQARI 197
Score = 76.1 bits (187), Expect = 2e-15
Identities = 30/194 (15%), Positives = 50/194 (25%), Gaps = 49/194 (25%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+L W N P+ + R L I ++ A D Y+C ++
Sbjct: 38 DDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSK 97
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ P+ K P + DV +NV
Sbjct: 98 FIPL--------------------IPIPERTTKPYP------ADIVVQFKDVYALMGQNV 131
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
+C G +P + W +P+ + V+
Sbjct: 132 TLECFAL---------G----------NPVPDIRWRKVLEPMPSTAEISTSGA----VLK 168
Query: 187 IAYVQSHDSGEYVC 200
I +Q D G Y C
Sbjct: 169 IFNIQLEDEGIYEC 182
Score = 75.7 bits (186), Expect = 2e-15
Identities = 42/219 (19%), Positives = 65/219 (29%), Gaps = 48/219 (21%)
Query: 102 PELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEW 161
P + P +V KE + + C +L W
Sbjct: 2 PGSGYLDPFPPEERPEVRVKEGKGMVLLCDPPYH-----------------FPDDLSYRW 44
Query: 162 FHNGKPIFHK--NRVKMVSDFGFVVMDIAYVQSHDSGEYVC------------QWFVNNK 207
N P+F R + G + IA V++ D G Y C F+
Sbjct: 45 LLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLI 102
Query: 208 PLPAGAKFKTTHDFGYVALDIELMLKTLV-----------PFTEWFVNNKPLPAGAKFKT 256
P+P D D+ ++ V P W +P+P+ A+ T
Sbjct: 103 PIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEIST 162
Query: 257 THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ L I ED GIY +A N +G +
Sbjct: 163 SGA----VLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197
Score = 75.3 bits (185), Expect = 4e-15
Identities = 34/194 (17%), Positives = 50/194 (25%), Gaps = 45/194 (23%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
P + ++EG+ L W N P+ R F
Sbjct: 9 PFPPEERPEVR-VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGN 67
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR----------------------- 803
L I+ V D G YSC + +
Sbjct: 68 LYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALM 127
Query: 804 --SIILE-----------------SQLPKGMEVFISFH--EISPVYPEDCGQYSCRAYND 842
++ LE +P E+ S +I + ED G Y C A N
Sbjct: 128 GQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENI 187
Query: 843 YGEAVTSASMKVQG 856
G+ A + VQ
Sbjct: 188 RGKDKHQARIYVQA 201
Score = 74.5 bits (183), Expect = 5e-15
Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 14/163 (8%)
Query: 241 WFVNNKPLPAGA--KFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSG---TL 295
W +N P+ + + G L I A D G Y+ ++ + + L
Sbjct: 44 WLLNEFPVFITMDKRRFVSQTNG--NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPL 101
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
+ +QF+ + G+ E +G+ + + +P+ ++
Sbjct: 102 IPIPERTTKPYPADIVVQFKDVY-ALMGQNVTLEC--FALGNPVPDIRWRKVLEPMPSTA 158
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
I T A VL+I ++ED G+Y C A N G+ + +
Sbjct: 159 EISTSGA----VLKIFNIQLEDEGIYECEAENIRGKDKHQARI 197
Score = 73.4 bits (180), Expect = 1e-14
Identities = 38/208 (18%), Positives = 57/208 (27%), Gaps = 56/208 (26%)
Query: 492 FIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP--FAT 549
++ PFP + V E + C + W N P
Sbjct: 6 YLDPFPP------EERPE----VRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITM 55
Query: 550 GSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI-------------- 595
R G +L + V A D G Y C ++ T +K I
Sbjct: 56 DKRRFVSQTNG--NLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYP 113
Query: 596 ---------------------CKVL---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDI 631
C L + W + +P T + I +I
Sbjct: 114 ADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTS-GAVLKIFNI 172
Query: 632 LYCYEENSGVYECRATNKYGSDVTKASL 659
E+ G+YEC A N G D +A +
Sbjct: 173 Q---LEDEGIYECEAENIRGKDKHQARI 197
Score = 67.6 bits (165), Expect = 2e-12
Identities = 22/186 (11%), Positives = 39/186 (20%), Gaps = 39/186 (20%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
+P + V + E + C ++ W LN P+
Sbjct: 8 DPFPPEERPEVR-------VKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRF 60
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIE 1537
+ V D G Y C ++ +
Sbjct: 61 VSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPL------------------- 101
Query: 1538 KIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWL 1597
PE+ + V Q + G+ G P P + W
Sbjct: 102 ---------IPIPERTTKPYPAD----IVVQFKDVYALMGQNVTLECFALGNPVPDIRWR 148
Query: 1598 INGHTI 1603
+
Sbjct: 149 KVLEPM 154
Score = 57.2 bits (138), Expect = 6e-09
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+P I W K P+ + I ++ L I +++ +D IY C+A N+ G+
Sbjct: 140 NPVPDIRWRKVLEPMPSTAEISTSGA----VLKIFNIQLEDEGIYECEAENIRGKDKHQA 195
Query: 66 TLKIE 70
+ ++
Sbjct: 196 RIYVQ 200
Score = 51.4 bits (123), Expect = 4e-07
Identities = 19/95 (20%), Positives = 29/95 (30%), Gaps = 5/95 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP--FATGSRVKTVYDFG 1110
P + + + V E + C + W N P R G
Sbjct: 8 DPFPPEERPE-VRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNG 66
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+L + V A D G Y C ++ T +K I
Sbjct: 67 --NLYIANVEASDKGNYSCFVSSPSITKSVFSKFI 99
Score = 41.8 bits (98), Expect = 8e-04
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
L I + ED+G Y C A N G+ +A I
Sbjct: 166 VLKIFNIQLEDEGIYECEAENIRGKDKHQARIY 198
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND,
structural protein, muscle, antibo; 1.69A {Homo sapiens}
Length = 97
Score = 108 bits (273), Expect = 3e-28
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
E + C++ D S V W+ + L + + + G I
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIEN-YDQSTQVTWYFGVRQLENSEKYEITYEDGVAI 59
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQ 1012
L + D+ D G Y CK N +GE ++ +L VKG +
Sbjct: 60 LYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVR 96
Score = 103 bits (260), Expect = 2e-26
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
+ + + + EG + + ++ D +V W++ + ++ ++ + G
Sbjct: 1 GAMVSGQIMHAV-GEEGGHVKYVCKIENYDQS-TQVTWYFGVRQLENSEKYEITYEDGVA 58
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR 803
IL + + D G Y C+ NDYGE + A + V+G R
Sbjct: 59 ILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVR 96
Score = 95.1 bits (237), Expect = 3e-23
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 1745 FLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLII 1803
I AV G ++ KI + V W +++ +Y+ ED + L +
Sbjct: 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVK 63
Query: 1804 EAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
+ D G Y C +N+ GE AEL V+ +
Sbjct: 64 DITKLDDGTYRCKVVNDYGEDSSYAELFVKGVR 96
Score = 92.0 bits (229), Expect = 3e-22
Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 1113
+ + Q+ E G V + C++E D + ++ W+F R + + Y+ G
Sbjct: 2 AMVSGQIMH-AVGEEGGHVKYVCKIEN-YDQSTQVTWYFGVRQLENSEKYEITYEDGVAI 59
Query: 1114 LDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHD 1151
L + + D G Y C+ N +G + A++ K +
Sbjct: 60 LYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVRE 97
Score = 90.5 bits (225), Expect = 1e-21
Identities = 16/96 (16%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILI 1698
+ + +I E ++ + + T + W+ + +S ++I +IL
Sbjct: 2 AMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILY 61
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 1734
++ + D G + N G+ A L V+ R+
Sbjct: 62 VKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVRE 97
Score = 84.7 bits (210), Expect = 1e-19
Identities = 15/65 (23%), Positives = 27/65 (41%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
D + ++ W+ L + T++ G+ L + + D Y CK N GE S
Sbjct: 29 DQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYA 88
Query: 66 TLKIE 70
L ++
Sbjct: 89 ELFVK 93
Score = 83.9 bits (208), Expect = 2e-19
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ E G V + C++E D + ++ W+F R + + Y+ G L + +
Sbjct: 10 HAVGEEGGHVKYVCKIEN-YDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKL 68
Query: 573 DSGEYICRATNKWGTAMTKAKVICK 597
D G Y C+ N +G + A++ K
Sbjct: 69 DDGTYRCKVVNDYGEDSSYAELFVK 93
Score = 78.9 bits (195), Expect = 1e-17
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 1428 VTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMN 1486
V+ + + E K+ C++ D + +V W+ + L + ++ Y+ G +
Sbjct: 4 VSG-QIMHAVGEEGGHVKYVCKIENY-DQSTQVTWYFGVRQLENSEKYEITYEDGVAILY 61
Query: 1487 FGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ D G Y C+ N YG D + A L
Sbjct: 62 VKDITKLDDGTYRCKVVNDYGEDSSYAELF 91
Score = 78.9 bits (195), Expect = 1e-17
Identities = 12/82 (14%), Positives = 33/82 (40%), Gaps = 2/82 (2%)
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 468
+ I ++G + C + D +V W+ + + + + ++ + G +
Sbjct: 2 AMVSGQIMHAV-GEEGGHVKYVCKIEN-YDQSTQVTWYFGVRQLENSEKYEITYEDGVAI 59
Query: 469 MDIAYVQSHDSGEYVCRAWNNF 490
+ + + D G Y C+ N++
Sbjct: 60 LYVKDITKLDDGTYRCKVVNDY 81
Score = 75.8 bits (187), Expect = 1e-16
Identities = 12/93 (12%), Positives = 33/93 (35%), Gaps = 18/93 (19%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + +E +V + C++E D +V W+ + +
Sbjct: 2 AMVSGQIMHAVGEEGGHVKYVCKIEN------------------YDQSTQVTWYFGVRQL 43
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + ++ + G ++ + + D G Y C+
Sbjct: 44 ENSEKYEITYEDGVAILYVKDITKLDDGTYRCK 76
Score = 75.4 bits (186), Expect = 2e-16
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG 372
+ + EG + + DQ+ V + + + +E S + + G+ +L +
Sbjct: 6 GQIMHAVGEEGGHVKYVCKIENY-DQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKD 64
Query: 373 TKIEDTGVYTCRATNKWGQAEISVNLEC 400
D G Y C+ N +G+ L
Sbjct: 65 ITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 75.0 bits (185), Expect = 3e-16
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 590 TKAKVICKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECR 645
K +CK+ + V W++ ++L + +Y ++ G+ IL + + + G Y C+
Sbjct: 17 GHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCK 76
Query: 646 ATNKYGSDVTKASLKC 661
N YG D + A L
Sbjct: 77 VVNDYGEDSSYAELFV 92
Score = 72.4 bits (178), Expect = 2e-15
Identities = 13/58 (22%), Positives = 22/58 (37%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
W+ + L K++ T++ G L + D G Y K N G ++ L
Sbjct: 35 TWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFV 92
Score = 63.9 bits (156), Expect = 2e-12
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 1265 PRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFF---PFINISTAFLIFN 1321
+I +E V++ ++E D +V ++F + S + I
Sbjct: 2 AMVSGQIMHAVGEEGGHVKYVCKIENY-DQSTQVT------WYFGVRQ-LENSEKYEI-- 51
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
++ G L + + D G Y C+ ND+GE + A + K
Sbjct: 52 -----------TYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVK 93
Score = 47.7 bits (114), Expect = 9e-07
Identities = 7/45 (15%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRP-RVMWLINGHTIVN 1605
+ Q +EG ++ ++ Y + +V W + N
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLEN 45
Score = 40.4 bits (95), Expect = 4e-04
Identities = 6/30 (20%), Positives = 11/30 (36%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
V+ + +EG V C+I +
Sbjct: 1 GAMVSGQIMHAVGEEGGHVKYVCKIENYDQ 30
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain,
immunoglobulin fold, alternative splicing, signal, muscle
protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A
1tnm_A 1tnn_A
Length = 106
Score = 107 bits (268), Expect = 2e-27
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS 1692
S K K + +E + ARF + DG+P+PT+ W R+ +++S Q+ T
Sbjct: 8 SSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTK 67
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
KS + V D G ++V+ EN GK + L +++
Sbjct: 68 YKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQK 106
Score = 101 bits (253), Expect = 2e-25
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 2/94 (2%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
A LT P +T+ E A F C +P TV W G+ LS +R +
Sbjct: 14 AARILTKPRSMTVYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKST 71
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
EI+ V D G Y+ N G+ LT++
Sbjct: 72 FEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105
Score = 97.8 bits (244), Expect = 3e-24
Identities = 23/93 (24%), Positives = 34/93 (36%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
+ LT S + G+ ARF V WL+ G+ + R++ T
Sbjct: 13 LAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTF 72
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
I D G Y V N+ G+ E L +Q
Sbjct: 73 EISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105
Score = 91.3 bits (227), Expect = 7e-22
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 5/109 (4%)
Query: 692 HLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMK 751
H ++ A ++ + EGE+A F +P V W G+ +
Sbjct: 2 HHHHHHSSKTTL--AARILTKPRSMT-VYEGESARFSCDTD--GEPVPTVTWLRKGQVLS 56
Query: 752 TGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
T +R + EIS V D G YS N G+ ++ +Q
Sbjct: 57 TSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105
Score = 76.2 bits (188), Expect = 1e-16
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+P + W + G LS +R + T T I+S++A D Y+ N G+ +
Sbjct: 41 EPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEF 100
Query: 66 TLKIE 70
TL I+
Sbjct: 101 TLTIQ 105
Score = 74.3 bits (183), Expect = 6e-16
Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
++ + + V E F C + +P + W G+ +T +R +
Sbjct: 14 AARILTKPRS-MTVYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKS 70
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ ++ V A D G Y N G + +
Sbjct: 71 TFEISSVQASDEGNYSVVVENSEGKQEAEFTLT 103
Score = 72.8 bits (179), Expect = 2e-15
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
+ + +S+ + +G+SA F C +P V W G+ + R ++ +
Sbjct: 14 AARILTKPRSMT-VYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKS 70
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
+I+ VQ+ D G Y N
Sbjct: 71 TFEISSVQASDEGNYSVVVEN 91
Score = 68.9 bits (169), Expect = 4e-14
Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 5/101 (4%)
Query: 1417 YEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN 1475
+ + R +T+ + V +S +F C G+P V W G+ L R
Sbjct: 7 HSSKTTLAARILTKP--RSMTVYEGESARFSCDT--DGEPVPTVTWLRKGQVLSTSARHQ 62
Query: 1476 PIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
V D G Y N G E L
Sbjct: 63 VTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLT 103
Score = 67.4 bits (165), Expect = 2e-13
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 19/92 (20%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
++ + E E+ F C + G +P V W G+ +
Sbjct: 15 ARILTKPRSMTVYEGESARFSCDTD---------G----------EPVPTVTWLRKGQVL 55
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
R ++ + +I+ VQ+ D G Y
Sbjct: 56 STSARHQVTTTKYKSTFEISSVQASDEGNYSV 87
Score = 65.5 bits (160), Expect = 8e-13
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
++ V E F C + +P + W G+ +T +R + + ++ V A
Sbjct: 23 SMTVYEGESARFSCDTD--GEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQAS 80
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D G Y N G + +
Sbjct: 81 DEGNYSVVVENSEGKQEAEFTLT 103
Score = 62.4 bits (152), Expect = 1e-11
Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 7/93 (7%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
+++ EGE A F G+ TV +L G+ + S R +
Sbjct: 15 ARIL---TKPRSMTVYEGESARFSCDT--DGEPVPTVTWLRKGQVLSTSARHQVTTTKYK 69
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
EI + D G Y+ N G+ E L
Sbjct: 70 STFEISSVQASDEGNYSVVVENSEGKQEAEFTL 102
Score = 60.8 bits (148), Expect = 4e-11
Identities = 15/56 (26%), Positives = 21/56 (37%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W + L A+ + T +I A D G Y+V NS+G TL
Sbjct: 48 WLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLT 103
Score = 58.9 bits (143), Expect = 2e-10
Identities = 17/51 (33%), Positives = 22/51 (43%)
Query: 1555 EDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
K A +++P + V EGE ARF G P P V WL G +
Sbjct: 7 HSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLST 57
Score = 58.9 bits (143), Expect = 2e-10
Identities = 21/130 (16%), Positives = 30/130 (23%), Gaps = 49/130 (37%)
Query: 1256 EEDEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVEC 1300
R +T+ S+TV E E RF P V R +V
Sbjct: 6 HHSSKTTLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVT- 64
Query: 1301 SLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYN 1360
+ +I V D+G Y N
Sbjct: 65 ---------------------------------TTKYKSTFEISSVQASDEGNYSVVVEN 91
Query: 1361 DHGEAFTKAT 1370
G+ + T
Sbjct: 92 SEGKQEAEFT 101
Score = 58.5 bits (142), Expect = 2e-10
Identities = 11/58 (18%), Positives = 18/58 (31%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W G+ L R++ +I + G Y N G + +L
Sbjct: 46 VTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLT 103
Score = 48.5 bits (116), Expect = 8e-07
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
EIS V D G YS N G+ ++ +Q
Sbjct: 73 EISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105
Score = 43.5 bits (103), Expect = 4e-05
Identities = 7/30 (23%), Positives = 11/30 (36%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
A + + V EG + C G+P
Sbjct: 14 AARILTKPRSMTVYEGESARFSCDTDGEPV 43
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth
factor-receptor complex, receptor tyrosine kinase, CY
4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus
musculus}
Length = 289
Score = 113 bits (283), Expect = 2e-27
Identities = 47/293 (16%), Positives = 75/293 (25%), Gaps = 33/293 (11%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITAT---ETT 1617
APV V+ GE C G V W +T
Sbjct: 4 APVIEPSGPELVVEPGETVTLRC-VSNG----SVEWDGPISPYWTLDPESPGSTLTTRNA 58
Query: 1618 EMEHKGK---IQERVVDASEK------PAKPPVFTKKIQPCRAFEQDQARFE--VEFDGD 1666
++ G + A + Q E +A + D
Sbjct: 59 TFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPA 117
Query: 1667 PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG-GKAKCSA 1725
++ RE ++ FS I+R+ + DS + G
Sbjct: 118 LKDSVSLMREGGRQV--LRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGI 175
Query: 1726 NLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIP 1785
L V PP S V G+ A+ + + LK G +
Sbjct: 176 WLKVNRV------HPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLE 229
Query: 1786 DIRYKTLEEDNLF---TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+++ L + +D+G Y CVA N+ G V
Sbjct: 230 IPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282
Score = 112 bits (282), Expect = 4e-27
Identities = 41/237 (17%), Positives = 67/237 (28%), Gaps = 18/237 (7%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
L ++TG Y C +++L V K + + + + +G
Sbjct: 52 TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLY-V---KDPAHSWNLLAQEVT-VVEGQE 106
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 486
A C +T + V G + V S + I + DS YVC+
Sbjct: 107 AVLPCLIT-DPALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVCKT 163
Query: 487 WNNFIFIPPFPIFIFHQIRLPSP-----SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 541
N I++ P P L C +
Sbjct: 164 MVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVC--SATNAEVGFNVIL 221
Query: 542 FNGR---PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
G S + Y +L ++ V +D+G Y C A+N GT
Sbjct: 222 KRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQ 278
Score = 101 bits (252), Expect = 3e-23
Identities = 39/246 (15%), Positives = 65/246 (26%), Gaps = 37/246 (15%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
PV + +G +++W SP + + S S L
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPI-----SPYWTLDPESPGSTLT 54
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 1758
R +++G + + +L V++ S+ + GQ
Sbjct: 55 TRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDP---------AHSWNLLAQEVTVVEGQ 105
Query: 1759 LARFDAKISATKPLD-VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVA 1817
A I+ D V ++ G + + +I +A V DS Y C
Sbjct: 106 EAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVCKT 163
Query: 1818 MNNAGE-ARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKC 1876
M N E L V E P + G A + C
Sbjct: 164 MVNGRESTSTGIWLKVN---------------RVHPEPPQIKLEPSKLVRIRGEAAQIVC 208
Query: 1877 RITGKP 1882
T
Sbjct: 209 SATNAE 214
Score = 99.6 bits (248), Expect = 9e-23
Identities = 43/339 (12%), Positives = 83/339 (24%), Gaps = 88/339 (25%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP-----I 1477
P V + + +VE ++ C N VEW P + +P
Sbjct: 2 DPAPVIEPSGPELVVEPGETVTLRCV------SNGSVEWDGPISPYWTLDPESPGSTLTT 55
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIE 1537
+ +++G Y C T L
Sbjct: 56 RN----------ATFKNTGTYRCTELEDPMAGSTTIHLYVKDPA---------------- 89
Query: 1538 KIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGY-PRPRVM 1595
+ + V EG+ A C +T + V
Sbjct: 90 -------------------------HSWNLLAQEVTVVEGQEAVLPC-LITDPALKDSVS 123
Query: 1596 WLINGHTIVNEIVRKITATETT------EMEHKG------KIQERV-------VDASEKP 1636
+ G V + ++ + R + +
Sbjct: 124 LMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVH 183
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED---FPITSSPDFQIHTFST 1693
+PP + + A+ + + I + DFQ + +
Sbjct: 184 PEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKK 243
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L + V +D+G+++ +A N G + N V E
Sbjct: 244 VRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVES 282
Score = 97.7 bits (243), Expect = 5e-22
Identities = 48/345 (13%), Positives = 77/345 (22%), Gaps = 109/345 (31%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
APV + + GE + VEW P T +
Sbjct: 4 APVIEPSGPELV-VEPGETVTLRCVSNGS------VEWDGPISPYWT-LDPESPGS---- 51
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE----------------- 808
L ++ G Y C D T+ + V+
Sbjct: 52 TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPC 111
Query: 809 ------------------SQLPKGMEVFISFH---EISPVYPEDCGQYSCRAYNDYGEAV 847
Q+ + F S I D Y C+ + G
Sbjct: 112 LITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVN-GRES 170
Query: 848 TSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHERED 907
TS + ++
Sbjct: 171 TSTGIWLK---------------------------------------------------- 178
Query: 908 RIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKT 967
+ + P+ P+ L A C + TN G
Sbjct: 179 -VNRVHPEPPQIKLEPSKLVRIRGEAAQIVC--SATNAEVGFNVILKRGDTKLEIPLNSD 235
Query: 968 INDFGFV---ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
D + L +N V +D+G+Y+C A+N G T + V
Sbjct: 236 FQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280
Score = 93.1 bits (231), Expect = 1e-20
Identities = 49/341 (14%), Positives = 79/341 (23%), Gaps = 97/341 (28%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P I PS L V V C ++W P+ T
Sbjct: 3 PAPVI---------EPSGPELVVEPGETVTLRCV------SNGSVEWDGPISPYWTLDPE 47
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI------------------ 595
+L +++G Y C T +
Sbjct: 48 SPGS-----TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVV 102
Query: 596 --------CKV----LTVIVEWFYNGKK-LPHGHRYRTFHDFGIVILDILYCYEENSGVY 642
C + L V G + + Y G +I +S Y
Sbjct: 103 EGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAK---VLDSNTY 159
Query: 643 ECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIE 702
C+ + V++
Sbjct: 160 VCKTMVNGRESTSTGIWLKVNRV------------------------------------- 182
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGK---PMKTGSRFRTF 759
H + P + S + GE A + T+ G + S F+
Sbjct: 183 HPEPPQIKLEPSKL-VRIRGEAAQIVC--SATNAEVGFNVILKRGDTKLEIPLNSDFQDN 239
Query: 760 CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L ++ V +D G YSC A ND G + + +V
Sbjct: 240 YYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280
Score = 90.4 bits (224), Expect = 1e-19
Identities = 45/317 (14%), Positives = 83/317 (26%), Gaps = 81/317 (25%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIE 70
+EW P + TL+ + ++ Y C +T L ++
Sbjct: 32 VEWDGPISP-----YWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVK 86
Query: 71 DRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDC 130
D P + +V E + C
Sbjct: 87 D----------------------PAHSWNLLAQ-------------EVTVVEGQEAVLPC 111
Query: 131 RVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYV 190
+ + V G + V S + I
Sbjct: 112 LI------------------TDPALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKA 151
Query: 191 QSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV-------------- 236
+ DS YVC+ VN + + + + I+L LV
Sbjct: 152 KVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSAT 211
Query: 237 ----PFTEWFVNNK---PLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSA 289
F +P + F+ + AL + +D+GIY+ A+N G+
Sbjct: 212 NAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTR 271
Query: 290 TTSGTLKCLERLFVNHN 306
T + + +E +H+
Sbjct: 272 TATMNFQVVESHHHHHH 288
Score = 86.2 bits (213), Expect = 3e-18
Identities = 38/299 (12%), Positives = 75/299 (25%), Gaps = 70/299 (23%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P L ++ G++ C N VEW P + + S
Sbjct: 4 APVIEPSGPELV-VEPGETVTLRCV---SNGS---VEWDGPISPYWTLDPESPGS----- 51
Query: 468 VMDIAYVQSHDSGEYVCRAWNN--------FIFIP-PFPIFIFHQIRLPSPSQDNLDVPE 518
+ ++G Y C + +++ P + + V E
Sbjct: 52 TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWN--------LLAQEVTVVE 103
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 578
+ C + + G V + + DS Y+
Sbjct: 104 GQEAVLPCLI-TDPALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYV 160
Query: 579 CRATNKWGTAMTKAKVICKVLTVIVE---------------------------------- 604
C+ G T + KV V E
Sbjct: 161 CKTMVN-GRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNV 219
Query: 605 WFYNGKK---LPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
G +P ++ + + L + +++G+Y C A+N G+ + +
Sbjct: 220 ILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQ 278
Score = 83.1 bits (205), Expect = 4e-17
Identities = 36/235 (15%), Positives = 59/235 (25%), Gaps = 46/235 (19%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
A + ++T+ E A C +T +V G + + +
Sbjct: 87 DPAHSWNLLAQEVTVVEGQEAVLPCLIT-DPALKDSVSLMREGGRQVLRKTVYFFSPWR- 144
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
I + DS Y CK G +TS + +K +
Sbjct: 145 -GFIIRKAKVLDSNTYVCKTMVN-GRESTSTGIWLKVNRVH------------------- 183
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 1093
P PP + L C +
Sbjct: 184 -----------------PEPPQIKLEPSK-LVRIRGEAAQIVC--SATNAEVGFNVILKR 223
Query: 1094 GR---PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
G S + Y +L ++ V +D+G Y C A+N GT
Sbjct: 224 GDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQ 278
Score = 76.5 bits (188), Expect = 5e-15
Identities = 50/332 (15%), Positives = 83/332 (25%), Gaps = 71/332 (21%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
+PV ++ + E V C S VEW P
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCVSNGS-----------------------VEWDGPISP 40
Query: 168 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQW-------------FVNNKPLPAGAK 214
+ + S + ++G Y C +V +
Sbjct: 41 YWTLDPESPGS-----TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHS---- 91
Query: 215 FKTTHDFGYVALDIELMLK------TLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIV 268
+ V E +L L + I
Sbjct: 92 WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRG--FIIR 149
Query: 269 GAYAEDSGIYTVKATNS-KGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAH 327
A DS Y K + + S +T LK P L+ L GE A
Sbjct: 150 KAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEP---PQIKLEPSKLV-RIRGEAAQ 205
Query: 328 F--EASLIPVGDQTMTVEFLYNGK---PIEASHRIRTVHAFGMVVLEILGTKIEDTGVYT 382
A+ + L G I + + + + L + +D G+Y+
Sbjct: 206 IVCSAT----NAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYS 261
Query: 383 CRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
C A+N G ++N + V+ H
Sbjct: 262 CVASNDVGTRTATMNFQVVES----HHHHHHH 289
Score = 76.1 bits (187), Expect = 9e-15
Identities = 26/227 (11%), Positives = 49/227 (21%), Gaps = 56/227 (24%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
AP + +L + C + +VEW +
Sbjct: 4 APVIEPSGPELVVEPGETVTLRCV------SNGSVEWDGPISPYWTLDPESPGS-----T 52
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
L + +++G Y C +T+ L VK
Sbjct: 53 LTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKD------------------------- 87
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
P + L + V E + C + + G
Sbjct: 88 -----------------PAHSWNLLAQEVTVVEGQEAVLPCLI-TDPALKDSVSLMREGG 129
Query: 1096 PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
V + + DS Y+C+ + +
Sbjct: 130 RQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVCKTMVNGRESTSTG 174
Score = 69.2 bits (169), Expect = 2e-12
Identities = 32/268 (11%), Positives = 53/268 (19%), Gaps = 90/268 (33%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L ++ G Y C D
Sbjct: 52 TLTTRNATFKNTGTYRCTELEDPMAG---------------------------------- 77
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
++ I+L K P + + +VE Q C V
Sbjct: 78 ------STTIHLY--------VKDPAHSWNLLAQEVTVVEGQEAVLPCL-ITDPALKDSV 122
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
G + + + DS Y+C+ + I
Sbjct: 123 SLMREGGRQVLRKTVYFFSPWRGFIIRK--AKVLDSNTYVCKTMVNGRESTSTGI----- 175
Query: 1520 KPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEP 1579
L + E P +P GE
Sbjct: 176 --------------------------------WLKVNRVHPEPPQIKLEPSKLVRIRGEA 203
Query: 1580 ARF-CTRVTGYPRPRVMWLINGHTIVNE 1606
A+ C+ T + L G T +
Sbjct: 204 AQIVCS-ATNAEVGFNVILKRGDTKLEI 230
Score = 65.4 bits (159), Expect = 3e-11
Identities = 42/300 (14%), Positives = 64/300 (21%), Gaps = 98/300 (32%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
VEW + L +N+G Y C + T L V
Sbjct: 32 VEWDGPISPYW-----TLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLY-V 85
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
A + + + + EG
Sbjct: 86 ----------------------------------------KDPAHSWNLLAQEVT-VVEG 104
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
+ A +T K V G F + I D Y C
Sbjct: 105 QEAVLPCLIT-DPALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVC 161
Query: 783 RAYNDYGEAVTSASMKV------------------------------------------- 799
+ + G TS + +
Sbjct: 162 KTMVN-GRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVI 220
Query: 800 ----QGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
K I L S + ++ V +D G YSC A ND G + + +V
Sbjct: 221 LKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVV 280
Score = 59.6 bits (144), Expect = 3e-09
Identities = 22/199 (11%), Positives = 37/199 (18%), Gaps = 55/199 (27%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ + G L + + I + DS Y CK E+ ST
Sbjct: 117 ALKDSVSLMREGGRQVLRKTVYFFSPWR--GFIIRKAKVLDSNTYVCKTMVNGRESTST- 173
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
+ + + P + + E
Sbjct: 174 ------------------------------GIWLKVNRVHPEPPQIKLEPSKLVRIRGEA 203
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
C N G D + +
Sbjct: 204 AQIVCSAT-------------------NAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKV 244
Query: 186 D---IAYVQSHDSGEYVCQ 201
+ V D+G Y C
Sbjct: 245 RALSLNAVDFQDAGIYSCV 263
Score = 51.9 bits (124), Expect = 9e-07
Identities = 15/72 (20%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Query: 4 RADPNLKIEWFKNG---VPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
K G + + L S + + + LS+N++ D+ IY+C A+N +G
Sbjct: 211 TNAEVGFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGT 270
Query: 61 AVSTCTLKIEDR 72
+T ++ +
Sbjct: 271 RTATMNFQVVES 282
Score = 50.3 bits (120), Expect = 2e-06
Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 51/188 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
I D YVC+ + E
Sbjct: 145 GFIIRKAKVLDSNTYVCKTMVNGRE----------------------------------- 169
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMK 1458
++ I+L +PP+ +++ + ++ + C
Sbjct: 170 ----STSTGIWLK----VNRVHPEPPQI--KLEPSKLVRIRGEAAQIVCS--ATNAEVGF 217
Query: 1459 VEWFLNGK---PLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
G +P + F Y A++ V +D+G Y C A+N G
Sbjct: 218 NVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNF 277
Query: 1516 KTTGKPGI 1523
+
Sbjct: 278 QVVESHHH 285
Score = 41.1 bits (96), Expect = 0.003
Identities = 14/95 (14%), Positives = 22/95 (23%), Gaps = 12/95 (12%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
PV L V V C ++W P+ T
Sbjct: 2 DPAPVIEPS-GPELVVEPGETVTLRCV------SNGSVEWDGPISPYWTLDPESPGS--- 51
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+L +++G Y C T +
Sbjct: 52 --TLTTRNATFKNTGTYRCTELEDPMAGSTTIHLY 84
Score = 40.7 bits (95), Expect = 0.003
Identities = 18/133 (13%), Positives = 33/133 (24%), Gaps = 32/133 (24%)
Query: 1259 EIPEEPPRFITEIESVTVQEAEPVRFETRVE----PRV----DPRLRVECSLSTAFFFPF 1310
+ EPP+ E + E + ++E L++ F +
Sbjct: 181 RVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEIPLNSDFQDNY 240
Query: 1311 INISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
+L ++ V +D G Y C A ND G
Sbjct: 241 YKKVR------------------------ALSLNAVDFQDAGIYSCVASNDVGTRTATMN 276
Query: 1371 ISCKKIPTIQLQN 1383
+ +
Sbjct: 277 FQVVESHHHHHHH 289
Score = 29.9 bits (67), Expect = 8.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
D AP + + V+ G VTL+C G
Sbjct: 2 DPAPVIEPSGPELVVEPGETVTLRCVSNG 30
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich
fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1
b.1.1.4
Length = 212
Score = 110 bits (277), Expect = 2e-27
Identities = 40/214 (18%), Positives = 67/214 (31%), Gaps = 31/214 (14%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI---------HT 1690
+ E + + + G P ++W T+ + T
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA--NLVVEEKRQGGRGGVVPPSFLTT 1748
FS+ I V +D+G + + GG+ +L V VPPS T
Sbjct: 62 FSSSGITF-SSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL----------VPPSKPTI 110
Query: 1749 ISSAVINVGQLARFD-AKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF--------T 1799
+ + +G A ++ + P + W K+G ++ KT N
Sbjct: 111 SVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGD 170
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
L+ DSG Y C A N G A +
Sbjct: 171 LIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204
Score = 90.4 bits (224), Expect = 3e-20
Identities = 48/247 (19%), Positives = 72/247 (29%), Gaps = 66/247 (26%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW-----------FHNGKALSAGSRI 965
T +D+ + E+ C T + S VEW +N + + +
Sbjct: 2 GSVYTAQSDVQVPENESIKLTC--TYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADR 59
Query: 966 KTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFA 1025
T + G + + V +D+G YTC + + G+ + + V
Sbjct: 60 VTFSSSG---ITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHL----------TVLV--- 103
Query: 1026 NATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT 1085
PP + V + C E P
Sbjct: 104 ---------------------------PPSKPTISVP-SSVTIGNRAVLTCS-EHDGSPP 134
Query: 1086 MRIDWFFNGRPFATGSRVKTVYDFGFI--------SLDMDYVYARDSGEYICRATNKWGT 1137
WF +G T KT L D V A DSGEY C+A N +GT
Sbjct: 135 SEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGT 194
Query: 1138 AMTKAKV 1144
AM
Sbjct: 195 AMRSEAA 201
Score = 82.3 bits (203), Expect = 2e-17
Identities = 35/204 (17%), Positives = 58/204 (28%), Gaps = 37/204 (18%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTE--- 1618
+ +V E E + CT +G+ PRV W + + T
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCT-YSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60
Query: 1619 -------------MEHKGK---IQERVVDASEKPAK-------PPVFTKKIQPCRAFEQD 1655
+ G+ + + PP P +
Sbjct: 61 TFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGN 120
Query: 1656 QARFE-VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI--------LIMRQVFMED 1706
+A E DG P WF++ + ++ + F S LI V D
Sbjct: 121 RAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFD 180
Query: 1707 SGVFAVIAENRGGKAKCSANLVVE 1730
SG + A+N G A S ++
Sbjct: 181 SGEYYCQAQNGYGTAMRSEAAHMD 204
Score = 81.9 bits (202), Expect = 2e-17
Identities = 44/278 (15%), Positives = 65/278 (23%), Gaps = 85/278 (30%)
Query: 1265 PRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS--------TA 1316
T V V E E ++ C+ S F + TA
Sbjct: 2 GSVYTAQSDVQVPENESIKLT--------------CTYSG---FSSPRVEWKFVQGSTTA 44
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKI 1376
+ +N + A F + V +D GEY C + G+ + + +I
Sbjct: 45 LVCYNSQITAPYADRVTFSSS--GITFSSVTRKDNGEYTCMVSEEGGQNYGEVSI----- 97
Query: 1377 PTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQ 1436
L VP P K
Sbjct: 98 ---HLTVLVP--------------------------------PSKPTIS--------VPS 114
Query: 1437 LVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW------ 1489
V + C G P + WF +G + +
Sbjct: 115 SVTIGNRAVLTCS-EHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIF 173
Query: 1490 --VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIY 1525
V DSGEY C+A N YG +
Sbjct: 174 DPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELNVG 211
Score = 81.6 bits (201), Expect = 3e-17
Identities = 36/209 (17%), Positives = 57/209 (27%), Gaps = 53/209 (25%)
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ YN + TF GI + +++G Y C + + G + + S+
Sbjct: 41 STTALVCYNSQITAPYADRVTFSSSGITFSSVT---RKDNGEYTCMVSEEGGQNYGEVSI 97
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
L +P P +
Sbjct: 98 H--------LTVLVP--------------------------------PSKPTISVPSS-V 116
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI--------LEISP 771
G A P + WF +G M T +T L P
Sbjct: 117 TIGNRAVLTCS-EHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDP 175
Query: 772 VYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
V D G+Y C+A N YG A+ S + +
Sbjct: 176 VTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204
Score = 78.9 bits (194), Expect = 2e-16
Identities = 32/160 (20%), Positives = 52/160 (32%), Gaps = 16/160 (10%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISV 396
+ T YN + T + G + +D G YTC + + GQ V
Sbjct: 39 QGSTTALVCYNSQITAPYADRVTFSSSG---ITFSSVTRKDNGEYTCMVSEEGGQNYGEV 95
Query: 397 NLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN 456
++ PP + + G+ A C+ P + WF +G + +
Sbjct: 96 SIHLTVLV---PPSKPTISVPSS-VTIGNRAVLTCS-EHDGSPPSEYSWFKDGISMLTAD 150
Query: 457 RVKMVSDFGFVVMD--------IAYVQSHDSGEYVCRAWN 488
K + V + DSGEY C+A N
Sbjct: 151 AKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQN 190
Score = 78.5 bits (193), Expect = 3e-16
Identities = 34/195 (17%), Positives = 50/195 (25%), Gaps = 66/195 (33%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
S V +D G+Y+C + G+ G+ SI L +P
Sbjct: 68 TFSSVTRKDNGEYTCMVSEEGGQNY--------GEVSIHLTVLVP--------------- 104
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
P T ++ A C
Sbjct: 105 ----------------------------------PSKPTISVPSSVTIGNRAVLTCS-EH 129
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI--------LEINDVYLRDSGLYTCKAT 994
P WF +G ++ KT L + V DSG Y C+A
Sbjct: 130 DGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQ 189
Query: 995 NKHGEATTSCKLTVK 1009
N +G A S +
Sbjct: 190 NGYGTAMRSEAAHMD 204
Score = 77.3 bits (190), Expect = 8e-16
Identities = 47/223 (21%), Positives = 65/223 (29%), Gaps = 42/223 (18%)
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEW-FHNGKPI--FHKNRVKMVSDFG 465
+ ++ + +S CT + +VEW F G N
Sbjct: 2 GSVYTAQSDVQVPE-NESIKLTCTYS--GFSSPRVEWKFVQGSTTALVCYNSQITAPYAD 58
Query: 466 FVVMD-----IAYVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPS 508
V + V D+GEY C + +PP P+
Sbjct: 59 RVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPP---------SKPT 109
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI------ 562
S V + C E P WF +G T KT
Sbjct: 110 ISVP-SSVTIGNRAVLTCS-EHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPK 167
Query: 563 --SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
L D V A DSGEY C+A N +GTAM + + V
Sbjct: 168 SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVELNV 210
Score = 69.2 bits (169), Expect = 5e-13
Identities = 27/214 (12%), Positives = 49/214 (22%), Gaps = 72/214 (33%)
Query: 6 DPNLKIEWFKNG----------VPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKAT 55
+ ++EW ++ R TF ++ +S+ D+ YTC +
Sbjct: 28 FSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSS--GITFSSVTRKDNGEYTCMVS 85
Query: 56 NLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL 115
G+ ++ + V P +
Sbjct: 86 EEGGQNYGEVSIHLT----------------------------------VLVPPSKPTIS 111
Query: 116 NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVK 175
C P + WF +G + + K
Sbjct: 112 VPSSVTIGNRAVLTCSEHDG------------------SPPSEYSWFKDGISMLTADAKK 153
Query: 176 MVSDFGFVVMD--------IAYVQSHDSGEYVCQ 201
+ V + DSGEY CQ
Sbjct: 154 TRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQ 187
Score = 65.0 bits (158), Expect = 2e-11
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 8/77 (10%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--------TLSINSLRADDSAIYTCK 53
E P + WFK+G+ + ++ L + + A DS Y C+
Sbjct: 128 EHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQ 187
Query: 54 ATNLLGEAVSTCTLKIE 70
A N G A+ + ++
Sbjct: 188 AQNGYGTAMRSEAAHMD 204
Score = 63.8 bits (155), Expect = 3e-11
Identities = 22/152 (14%), Positives = 35/152 (23%), Gaps = 30/152 (19%)
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL----- 1797
S T S + + + S V W + Y +
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVT 61
Query: 1798 ---FTLLIIEAVVEDSGAYECVAMNNAGEARCEA--ELVVQSKKAPGKQAPAPGAAVAQD 1852
+ +D+G Y C+ G+ E L V
Sbjct: 62 FSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL------------------- 102
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCR-ITGKPR 1883
P+ +V G+ L C G P
Sbjct: 103 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPP 134
Score = 61.9 bits (150), Expect = 2e-10
Identities = 32/207 (15%), Positives = 55/207 (26%), Gaps = 62/207 (29%)
Query: 707 PVFTVPLSNIDDLREGENAHFE--ARLTPT-------DDPKLKVEWFWNGKPMKTGSRFR 757
S++ + E E+ + +N + +
Sbjct: 2 GSVYTAQSDVQ-VPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRV 60
Query: 758 TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMK--VQGKRSIILESQ---LP 812
TF G + S V +D G+Y+C + G+ S+ V S S +
Sbjct: 61 TFSSSG---ITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVT 117
Query: 813 KGMEVFISFHE--------------------------------------------ISPVY 828
G ++ E PV
Sbjct: 118 IGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVT 177
Query: 829 PEDCGQYSCRAYNDYGEAVTSASMKVQ 855
D G+Y C+A N YG A+ S + +
Sbjct: 178 AFDSGEYYCQAQNGYGTAMRSEAAHMD 204
Score = 61.9 bits (150), Expect = 2e-10
Identities = 25/143 (17%), Positives = 41/143 (28%), Gaps = 15/143 (10%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
+ +D+G YT + G ++ L V P S ++ G
Sbjct: 67 ITFSSVTRKDNGEYTCMVSEEGGQNYGEVSI----HLTV-LVPPSKPTISVPSS-VTIGN 120
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV--------LEILGTKIE 376
A S G + +G + + +T L
Sbjct: 121 RAVLTCS-EHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAF 179
Query: 377 DTGVYTCRATNKWGQAEISVNLE 399
D+G Y C+A N +G A S
Sbjct: 180 DSGEYYCQAQNGYGTAMRSEAAH 202
Score = 61.5 bits (149), Expect = 2e-10
Identities = 35/198 (17%), Positives = 59/198 (29%), Gaps = 49/198 (24%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFAT-------GSRVKTVYDFGF 561
+Q ++ VPE + C + R++W F G A + F
Sbjct: 7 AQSDVQVPENESIKLTC--TYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS 64
Query: 562 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVL---------------------- 599
+ V +D+GEY C + + G + + VL
Sbjct: 65 SGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVL 124
Query: 600 ---------TVIVEWFYNGKKLPHG--HRYRTFHDFGIVI------LDILYCYEENSGVY 642
WF +G + + R F + I L +SG Y
Sbjct: 125 TCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEY 184
Query: 643 ECRATNKYGSDVTKASLK 660
C+A N YG+ + +
Sbjct: 185 YCQAQNGYGTAMRSEAAH 202
Score = 61.1 bits (148), Expect = 2e-10
Identities = 35/212 (16%), Positives = 56/212 (26%), Gaps = 52/212 (24%)
Query: 1425 PRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEW-FLNGKPLPHKNRFNPIYDFGYV 1483
T Q+ E +S K C G + +VEW F+ G + I
Sbjct: 2 GSVYTAQSDV-QVPENESIKLTCT--YSGFSSPRVEWKFVQGSTTALVCYNSQITAPYAD 58
Query: 1484 AMNFGW-------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSI 1536
+ F V +D+GEY C + G + + T
Sbjct: 59 RVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLT------------------ 100
Query: 1537 EKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVM 1595
V P + V G A C+ G P
Sbjct: 101 -----------------VL-----VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYS 138
Query: 1596 WLINGHTIVNEIVRKITATETTEMEHKGKIQE 1627
W +G +++ +K A + K +
Sbjct: 139 WFKDGISMLTADAKKTRAFMNSSFTIDPKSGD 170
Score = 52.3 bits (125), Expect = 3e-07
Identities = 41/235 (17%), Positives = 58/235 (24%), Gaps = 81/235 (34%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEW-FHNGKP 167
+ +DV+ ENE++ C G +VEW F G
Sbjct: 2 GSVYTAQSDVQVPENESIKLTCTYS---------G----------FSSPRVEWKFVQGST 42
Query: 168 I--FHKNRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHD 220
N V + V D+GEY C V+ +
Sbjct: 43 TALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCM--VSE-------------E 87
Query: 221 FGYVALDIELMLKTLVP--FTE-----------------------------WFVNNKPLP 249
G ++ + L LVP WF + +
Sbjct: 88 GGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISML 147
Query: 250 AGAKFKTTHDFGYVA--------LDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
KT L A DSG Y +A N G+A S
Sbjct: 148 TADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAH 202
Score = 41.1 bits (96), Expect = 0.001
Identities = 23/115 (20%), Positives = 28/115 (24%), Gaps = 22/115 (19%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINIS------TA 1316
PP T +V CS P S +
Sbjct: 103 VPPSKPTISVPSSVTIGNRAVLT--------------CSEHDGS--PPSEYSWFKDGISM 146
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
A + S D L D V D GEY C+A N +G A
Sbjct: 147 LTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAA 201
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative
splicing, ATP-binding, calcium, calmodulin-binding,
cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O*
2wwm_C 2wwk_O
Length = 107
Score = 106 bits (266), Expect = 4e-27
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Query: 910 EEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIN 969
D G P FL P + + A +C + +P V W G+ L+A R+
Sbjct: 7 SGDQGSPPCFLRFPRPVRVVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPA 64
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
D L + D+G+Y C+A N GEA + +TV
Sbjct: 65 DGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVL 104
Score = 100 bits (252), Expect = 3e-25
Identities = 23/101 (22%), Positives = 41/101 (40%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
+S PP F + +P R +A + G+P P + W + + +S
Sbjct: 6 SSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPAD 65
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+ L++ D+GV+ A N G+A +A + V E
Sbjct: 66 GAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106
Score = 99.4 bits (248), Expect = 1e-24
Identities = 27/95 (28%), Positives = 37/95 (38%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
PP FL + G A + P V W K G+++ R + L
Sbjct: 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGL 71
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
L+ A+ D+G Y C A N AGEA A + V
Sbjct: 72 LLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106
Score = 94.4 bits (235), Expect = 7e-23
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Query: 696 TETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR 755
+ + + P F + + G A + + +P V W G+ + R
Sbjct: 3 MKASSGDQGSPPCFLRFPRPVR-VVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASER 59
Query: 756 FRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
D L ++ P D G Y CRA N GEA +A++ V
Sbjct: 60 LSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106
Score = 79.0 bits (195), Expect = 1e-17
Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Query: 1047 DEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 1106
++ +PP F + + V + C + +P + W G+ A R+
Sbjct: 7 SGDQGSPPCFLRFPRP-VRVVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFP 63
Query: 1107 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
D L + D+G Y+CRA N G A A V
Sbjct: 64 ADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102
Score = 77.0 bits (190), Expect = 6e-17
Identities = 16/68 (23%), Positives = 29/68 (42%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P + W K G L+ R+ D L + + D+ +Y C+A N GEA +
Sbjct: 38 LGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYA 97
Query: 64 TCTLKIED 71
+ + +
Sbjct: 98 AAAVTVLE 105
Score = 75.5 bits (186), Expect = 3e-16
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 5/105 (4%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP 1476
++ PP F+ + V + +C + +G+P V W G+ L R +
Sbjct: 7 SGDQGSPPCFLRFP--RPVRVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSF 62
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
D + P D+G Y+CRA N G A + P
Sbjct: 63 PADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107
Score = 73.2 bits (180), Expect = 2e-15
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
Query: 402 DKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 461
+G PP F + + + G A +C + +P V W G+ + R+
Sbjct: 7 SGDQGSPPCFLRFPRPVRVV-SGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFP 63
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+D + + D+G YVCRA N
Sbjct: 64 ADGAEHGLLLTAALPTDAGVYVCRARN 90
Score = 67.4 bits (165), Expect = 1e-13
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V + C + +P + W G+ A R+ D L +
Sbjct: 22 PVRVVSGAEAELKCVVL--GEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPT 79
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
D+G Y+CRA N G A A +TV+
Sbjct: 80 DAGVYVCRARNAAGEAYAAAA-----VTVLE 105
Score = 65.9 bits (161), Expect = 6e-13
Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 7/94 (7%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P F + + G A + + +G+ V + G+ + AS R+
Sbjct: 14 PCFL---RFPRPVRVVSGAEAELKCVV--LGEPPPVVVWEKGGQQLAASERLSFPADGAE 68
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L + D GVY CRA N G+A + +
Sbjct: 69 HGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102
Score = 65.1 bits (159), Expect = 1e-12
Identities = 19/108 (17%), Positives = 29/108 (26%), Gaps = 25/108 (23%)
Query: 93 KPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPV 152
K + P P F+ V C V G
Sbjct: 4 KASSGDQGSP------PCFLRFPRPVRVVSGAEAELKCVVL---------G--------- 39
Query: 153 NDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+P V W G+ + R+ +D + + D+G YVC
Sbjct: 40 -EPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVC 86
Score = 64.3 bits (157), Expect = 2e-12
Identities = 26/135 (19%), Positives = 33/135 (24%), Gaps = 50/135 (37%)
Query: 1252 PEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRL 1296
P + + PP F+ V V + V P V RL
Sbjct: 2 PMKASSGD-QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERL 60
Query: 1297 RVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVC 1356
D L + P D G YVC
Sbjct: 61 SFP----------------------------------ADGAEHGLLLTAALPTDAGVYVC 86
Query: 1357 RAYNDHGEAFTKATI 1371
RA N GEA+ A +
Sbjct: 87 RARNAAGEAYAAAAV 101
Score = 63.2 bits (154), Expect = 5e-12
Identities = 14/60 (23%), Positives = 23/60 (38%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W + L A + D L + A D+G+Y +A N+ G A + +
Sbjct: 43 PVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102
Score = 60.9 bits (148), Expect = 3e-11
Identities = 16/58 (27%), Positives = 23/58 (39%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W G++L R D L + ++GVY CRA N G A++
Sbjct: 45 VVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVT 102
Score = 58.2 bits (141), Expect = 3e-10
Identities = 13/50 (26%), Positives = 17/50 (34%)
Query: 1554 VEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
P F+ P +V G A V G P P V+W G +
Sbjct: 5 ASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQL 54
Score = 48.5 bits (116), Expect = 8e-07
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 1842 APAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P ++ Q P + V G+ LKC + G+P
Sbjct: 1 GPMKASSGDQGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPP 42
Score = 48.5 bits (116), Expect = 8e-07
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
++ P D G Y CRA N GEA +A++ V
Sbjct: 72 LLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEP 106
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural
genomics, IG-fold I-SET, RGD motif, homophilic adhesion,
arterial smooth muscle cells; 0.96A {Homo sapiens}
Length = 99
Score = 105 bits (263), Expect = 1e-26
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS-RIKTINDFGF 973
P F + D ++ E R+ +P V W N + + R + G
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGL 61
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
L I D+G YTCKA N++G +L V+G
Sbjct: 62 CRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRG 98
Score = 101 bits (255), Expect = 9e-26
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD-IRYKTLEEDNLFT 1799
PP+F ++ + GQ ++ V WL+N + + PD R+ E L
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
L I+ A D+G Y C A+N G +CEA L V+ +
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 97.7 bits (244), Expect = 3e-24
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS-RFRTFCDF 762
+ P F V L + +REG++ R+ +PK V W N +P++ RF +
Sbjct: 3 KAPPTFKVSLMDQS-VREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEG 59
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
G L I D G Y+C+A N+YG A ++V+G+
Sbjct: 60 GLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 93.5 bits (233), Expect = 1e-22
Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST-KSI 1696
PP F + E + G+P P + W R P+
Sbjct: 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCR 63
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L + D+G + A N G +C A L V +
Sbjct: 64 LRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 79.2 bits (196), Expect = 1e-17
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVKTVYDFGF 1111
PP F L D V E V R++ +P + W N +P R + G
Sbjct: 5 PPTFKVSLMD-QSVREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGL 61
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + D+G Y C+A N++G +A++ + +
Sbjct: 62 CRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 75.8 bits (187), Expect = 2e-16
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Query: 1422 KQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPL-PHKNRFNPIYD 1479
K PP F + DQ V Q ++ G+P V W N +P+ P + RF +
Sbjct: 3 KAPPTFKVSL--MDQSVREGQDVIMSIRV--QGEPKPVVSWLRNRQPVRPDQRRFAEEAE 58
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGK 1520
G + D+G Y C+A N YG + A L+ G+
Sbjct: 59 GGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 75.8 bits (187), Expect = 2e-16
Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 4 RADPNLKIEWFKNGVPLSLGS-RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
+ +P + W +N P+ R + GL L I + D+ YTCKA N G
Sbjct: 30 QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQ 89
Query: 63 STCTLKIE 70
L++
Sbjct: 90 CEARLEVR 97
Score = 70.4 bits (173), Expect = 1e-14
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH-KNRVKMVSDFGF 466
PP F + +++G + +P+ V W N +P+ + R ++ G
Sbjct: 5 PPTFKVSLMDQS-VREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGL 61
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF 490
+ I + D+G Y C+A N +
Sbjct: 62 CRLRILAAERGDAGFYTCKAVNEY 85
Score = 67.7 bits (166), Expect = 9e-14
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 20/94 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F L D +E ++V RV+ G +P+ V W N +P+
Sbjct: 6 PTFKVSLMDQSVREGQDVIMSIRVQ---------G----------EPKPVVSWLRNRQPV 46
Query: 169 FH-KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ R ++ G + I + D+G Y C+
Sbjct: 47 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80
Score = 65.0 bits (159), Expect = 1e-12
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 3/86 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP-FATGSRVKTVYDFGFISLDMDYVYA 571
+ V E V R++ +P + W N +P R + G L +
Sbjct: 14 DQSVREGQDVIMSIRVQ--GEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAER 71
Query: 572 RDSGEYICRATNKWGTAMTKAKVICK 597
D+G Y C+A N++G +A++ +
Sbjct: 72 GDAGFYTCKAVNEYGARQCEARLEVR 97
Score = 64.2 bits (157), Expect = 2e-12
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS-HRIRTVHAFG 364
P F L + S EG+ + G+ V +L N +P+ R G
Sbjct: 6 PTFK---VSLMDQSVREGQDVIMSIRV--QGEPKPVVSWLRNRQPVRPDQRRFAEEAEGG 60
Query: 365 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ L IL + D G YTC+A N++G + LE
Sbjct: 61 LCRLRILAAERGDAGFYTCKAVNEYGARQCEARLE 95
Score = 64.2 bits (157), Expect = 2e-12
Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 38/123 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV----EPRV------DPRLRVECSLSTAFFFPFI 1311
+ PP F + +V+E + V RV +P V P +
Sbjct: 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQP----------------V 46
Query: 1312 NISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
+ G L I D G Y C+A N++G +A +
Sbjct: 47 RPDQRRFAEEA------------EGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARL 94
Query: 1372 SCK 1374
+
Sbjct: 95 EVR 97
Score = 63.1 bits (154), Expect = 4e-12
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 603 VEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W N + + P R+ + G+ L IL ++G Y C+A N+YG+ +A L+
Sbjct: 37 VSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLE 95
Score = 62.7 bits (153), Expect = 7e-12
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 237 PFTEWFVNNKPL-PAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W N +P+ P +F + G L I+ A D+G YT KA N G+ L
Sbjct: 35 PVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARL 94
Query: 296 K 296
+
Sbjct: 95 E 95
Score = 59.6 bits (145), Expect = 9e-11
Identities = 16/44 (36%), Positives = 20/44 (45%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
K P F Q V+EG+ RV G P+P V WL N +
Sbjct: 3 KAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 46
Score = 55.0 bits (133), Expect = 3e-09
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
I D G Y+C+A N+YG A ++V+G+
Sbjct: 65 RILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 99
Score = 44.6 bits (106), Expect = 1e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
PT L DQ+V+EG V + R+ G+P+
Sbjct: 1 GSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPK 34
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein,
cell membrane, cytoplasm, cytoskeleton, disease mutation,
immunoglobulin domain; NMR {Homo sapiens}
Length = 100
Score = 104 bits (262), Expect = 1e-26
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI-NDFGFV 974
P F+ P ++++ E + +++ P+ V W+ NG+ + + K I ++ G
Sbjct: 5 PPRFIQVPENMSIDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLH 62
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQ 1012
L V D+G Y C A N+ GEAT + +L V ++
Sbjct: 63 SLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAKE 100
Score = 103 bits (260), Expect = 2e-26
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYK-TLEED 1795
G + PP F+ + I+ G+ R D K+S P DV W NG+ + D +K + E
Sbjct: 1 GAMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAP-DVSWYLNGRTVQSDDLHKMIVSEK 59
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
L +L+ D+GAY CVA N AGEA +L V +K+
Sbjct: 60 GLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAKE 100
Score = 95.9 bits (239), Expect = 2e-23
Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF-STK 1694
PP F + + E R + + G P P + W+ + S ++
Sbjct: 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL 61
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
LI V D+G +A +A+NR G+A + L V K
Sbjct: 62 HSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 87.8 bits (218), Expect = 1e-20
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDFG 763
P F N+ + EG + +++ P V W+ NG+ +++ + + G
Sbjct: 4 GPPRFIQVPENMS-IDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKG 60
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L V D G Y+C A N GEA + + V K
Sbjct: 61 LHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 76.6 bits (189), Expect = 9e-17
Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 4/98 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGF 1111
PP F ++ + + E D ++ P + W+ NGR + K + + G
Sbjct: 5 PPRFIQVPEN-MSIDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGL 61
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
SL + V A D+G Y C A N+ G A ++ AK
Sbjct: 62 HSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 73.5 bits (181), Expect = 1e-15
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P + W+ NG + + + GL +L +RA D+ Y C A N GEA T
Sbjct: 32 LPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFT 91
Query: 65 CTLKIEDR 72
L + +
Sbjct: 92 VQLDVLAK 99
Score = 72.0 bits (177), Expect = 3e-15
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV-SDFG 465
PP+F +++ + +G + ++ P V W+ NG+ + + KM+ S+ G
Sbjct: 4 GPPRFIQVPENMS-IDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKG 60
Query: 466 FVVMDIAYVQSHDSGEYVCRAWN 488
+ V++ D+G Y C A N
Sbjct: 61 LHSLIFEVVRASDAGAYACVAKN 83
Score = 70.4 bits (173), Expect = 1e-14
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P FI ++ E D +V G P V W+ NG+ +
Sbjct: 6 PRFIQVPENMSIDEGRFCRMDFKVS---------G----------LPAPDVSWYLNGRTV 46
Query: 169 FHKNRVKMV-SDFGFVVMDIAYVQSHDSGEYVC 200
+ KM+ S+ G + V++ D+G Y C
Sbjct: 47 QSDDLHKMIVSEKGLHSLIFEVVRASDAGAYAC 79
Score = 67.7 bits (166), Expect = 1e-13
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY-DFG 1481
PPRF+ + + E + + + ++ G P V W+LNG+ + + I + G
Sbjct: 4 GPPRFIQVPENMS-IDEGRFCRMDFKV--SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKG 60
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGK 1520
++ F V D+G Y C A N G L K
Sbjct: 61 LHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 67.0 bits (164), Expect = 2e-13
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 8/93 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGFISLDMDYVYA 571
N+ + E D ++ P + W+ NGR + K + + G SL + V A
Sbjct: 14 NMSIDEGRFCRMDFKVS--GLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRA 71
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
D+G Y C A N+ G A + L V+ +
Sbjct: 72 SDAGAYACVAKNRAGEATFTVQ-----LDVLAK 99
Score = 63.5 bits (155), Expect = 4e-12
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR-TVHAFG 364
P F Q N+S EG + + G V + NG+ +++ + V G
Sbjct: 6 PRFI---QVPENMSIDEGRFCRMDFKV--SGLPAPDVSWYLNGRTVQSDDLHKMIVSEKG 60
Query: 365 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ L + D G Y C A N+ G+A +V L+
Sbjct: 61 LHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLD 95
Score = 62.0 bits (151), Expect = 1e-11
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATE 1615
P F+ PE + EG R +V+G P P V W +NG T+ ++ + K+ +E
Sbjct: 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSE 58
Score = 61.6 bits (150), Expect = 2e-11
Identities = 26/127 (20%), Positives = 37/127 (29%), Gaps = 48/127 (37%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTA 1305
PPRFI E++++ E R + +V P V D ++ S
Sbjct: 2 AMGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVS---- 57
Query: 1306 FFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ G SL + V D G Y C A N GEA
Sbjct: 58 -----------------------------EKGLHSLIFEVVRASDAGAYACVAKNRAGEA 88
Query: 1366 FTKATIS 1372
+
Sbjct: 89 TFTVQLD 95
Score = 58.9 bits (143), Expect = 2e-10
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 237 PFTEWFVNNKPLPAGAKFK-TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W++N + + + K + G +L A D+G Y A N G AT + L
Sbjct: 35 PDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQL 94
Query: 296 KCLER 300
L +
Sbjct: 95 DVLAK 99
Score = 57.3 bits (139), Expect = 5e-10
Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Query: 603 VEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
V W+ NG+ + ++ + G+ L ++G Y C A N+ G L
Sbjct: 37 VSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKNRAGEATFTVQLDV 96
Query: 662 VSK 664
++K
Sbjct: 97 LAK 99
Score = 48.5 bits (116), Expect = 7e-07
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
V D G Y+C A N GEA + + V K
Sbjct: 65 IFEVVRASDAGAYACVAKNRAGEATFTVQLDVLAK 99
Score = 41.9 bits (99), Expect = 1e-04
Identities = 5/31 (16%), Positives = 14/31 (45%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + ++ ++ EG + +++G P
Sbjct: 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPA 34
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin,
actin-associated scaffold, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 110
Score = 104 bits (262), Expect = 1e-26
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK-TINDFG 972
G P FL P DLT+ E L +C+++ P+ + W +GK + S K + + G
Sbjct: 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENG 64
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L I V RD+G+YTC ATN+ G+ + S +L V +
Sbjct: 65 VHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAK 103
Score = 101 bits (254), Expect = 2e-25
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYK-TLEEDNLF 1798
P FL + G+L R D K+S P D+ W +GK + PD +K + E+ +
Sbjct: 8 FRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTP-DLSWQLDGKPVRPDSAHKMLVRENGVH 66
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+L+I D+G Y C+A N AG+ ELVV +K++
Sbjct: 67 SLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESG 106
Score = 96.7 bits (241), Expect = 1e-23
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI-HT 1690
+S P F + E R + + G P P + W + P+ ++
Sbjct: 2 SSGSSGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVR 61
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQG 1735
+ LI+ V D+G++ IA NR G+ S LVV K G
Sbjct: 62 ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKESG 106
Score = 89.7 bits (223), Expect = 2e-21
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR-TFCDFG 763
P F ++ ++EG+ + +++ P + W +GKP++ S + + G
Sbjct: 8 FRPHFLQAPGDLT-VQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENG 64
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
L I PV D G Y+C A N G+ S + V K S
Sbjct: 65 VHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKES 105
Score = 74.7 bits (184), Expect = 6e-16
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 10/110 (9%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGF 1111
P F D L V E DC++ PT + W +G+P S K + + G
Sbjct: 9 RPHFLQAPGD-LTVQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENGV 65
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
SL ++ V +RD+G Y C ATN+ G +++ + + P S
Sbjct: 66 HSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELV------VAAKESGPSS 109
Score = 73.9 bits (182), Expect = 9e-16
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)
Query: 403 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV- 461
S G P F L +++G +C ++ P + W +GKP+ + KM+
Sbjct: 4 GSSGFRPHFLQAPGDLT-VQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLV 60
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ G + I V S D+G Y C A N
Sbjct: 61 RENGVHSLIIEPVTSRDAGIYTCIATN 87
Score = 72.0 bits (177), Expect = 4e-15
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF-DFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P + W +G P+ S + + G+ +L I + + D+ IYTC ATN G+ +
Sbjct: 36 LPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS 95
Query: 65 CTLKIEDR 72
L + +
Sbjct: 96 LELVVAAK 103
Score = 70.1 bits (172), Expect = 2e-14
Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
P F+ D V+ + + +C++ G P + W L+GKP+ + +
Sbjct: 4 GSSGFRPHFLQAP--GDLTVQEGKLCRMDCKV--SGLPTPDLSWQLDGKPVRPDSAHKML 59
Query: 1478 Y-DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ G ++ V D+G Y C ATN G + L K
Sbjct: 60 VRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKE 104
Score = 68.2 bits (167), Expect = 1e-13
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F+ D+ +E + DC+V G P + W +GKP+
Sbjct: 10 PHFLQAPGDLTVQEGKLCRMDCKVS---------G----------LPTPDLSWQLDGKPV 50
Query: 169 FHKNRVKMV-SDFGFVVMDIAYVQSHDSGEYVC 200
+ KM+ + G + I V S D+G Y C
Sbjct: 51 RPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTC 83
Score = 65.1 bits (159), Expect = 1e-12
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-DFGFISLDMDYVYA 571
+L V E DC++ PT + W +G+P S K + + G SL ++ V +
Sbjct: 18 DLTVQEGKLCRMDCKVS--GLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTS 75
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
RD+G Y C ATN+ G + L V +
Sbjct: 76 RDAGIYTCIATNRAGQNSFSLE-----LVVAAK 103
Score = 63.2 bits (154), Expect = 6e-12
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA-FG 364
P F Q +L+ EG++ + + G T + + +GKP+ + + G
Sbjct: 10 PHFL---QAPGDLTVQEGKLCRMDCKV--SGLPTPDLSWQLDGKPVRPDSAHKMLVRENG 64
Query: 365 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
+ L I D G+YTC ATN+ GQ S+ L V + P
Sbjct: 65 VHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELV-VAAKESGPS 108
Score = 61.6 bits (150), Expect = 2e-11
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET 1616
P F+ P VQEG+ R +V+G P P + W ++G + + K+ E
Sbjct: 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVREN 63
Score = 59.3 bits (144), Expect = 1e-10
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTH-DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W ++ KP+ + K + G +L I + D+GIYT ATN G + S L
Sbjct: 39 PDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLEL 98
Query: 296 K 296
Sbjct: 99 V 99
Score = 58.5 bits (142), Expect = 2e-10
Identities = 22/123 (17%), Positives = 34/123 (27%), Gaps = 48/123 (39%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTAFFF 1308
P F+ +TVQE + R + +V P + D ++
Sbjct: 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVR------- 61
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
+ G SL I+ V D G Y C A N G+
Sbjct: 62 --------------------------ENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFS 95
Query: 1369 ATI 1371
+
Sbjct: 96 LEL 98
Score = 55.8 bits (135), Expect = 2e-09
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 603 VEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ W +GK + ++ + G+ L I ++G+Y C ATN+ G + L
Sbjct: 41 LSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIATNRAGQNSFSLELV 99
Score = 50.1 bits (120), Expect = 2e-07
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 859
I PV D G Y+C A N G+ S + V K S
Sbjct: 69 IIEPVTSRDAGIYTCIATNRAGQNSFSLELVVAAKES 105
Score = 47.0 bits (112), Expect = 3e-06
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1846 GAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
G++ + P + D V+EG + C+++G P
Sbjct: 1 GSSGSSGFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPT 38
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle
isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: b.1.1.4
Length = 114
Score = 105 bits (263), Expect = 1e-26
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEED 1795
G G P + + G+ K++ T+P+ W+K K+I K +
Sbjct: 1 GSSGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSE 60
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK-KAPGKQAPAPGAA 1848
N L I+ A E G Y + N G + + L V K P P +
Sbjct: 61 NGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGTPSGPSSG 114
Score = 100 bits (251), Expect = 5e-25
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 7/107 (6%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
P + + + + + G T W + I S ++ S L
Sbjct: 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLT 66
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSF 1745
+ E G + ++ EN+ G + NL V +K PP+
Sbjct: 67 ILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD-------PPAG 106
Score = 97.4 bits (243), Expect = 7e-24
Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P+ + P D + ++T +T W K + +K N
Sbjct: 7 GPQIIQFPEDQKVRAGESVELFGKVTG--TQPITCTWMKFRKQIQESEHMKVENSENGSK 64
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L I G YT NK G LTV +
Sbjct: 65 LTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDK 100
Score = 85.1 bits (211), Expect = 1e-19
Identities = 17/100 (17%), Positives = 29/100 (29%), Gaps = 3/100 (3%)
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF 762
P + +R GE+ ++T + W K ++ +
Sbjct: 4 GSSGPQIIQFPEDQK-VRAGESVELFGKVTG--TQPITCTWMKFRKQIQESEHMKVENSE 60
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L I E CG Y+ N G ++ V K
Sbjct: 61 NGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDK 100
Score = 73.9 bits (182), Expect = 1e-15
Identities = 12/67 (17%), Positives = 22/67 (32%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ W K + ++ L+I + R + YT N LG +
Sbjct: 34 TQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQV 93
Query: 66 TLKIEDR 72
L + D+
Sbjct: 94 NLTVVDK 100
Score = 73.9 bits (182), Expect = 1e-15
Identities = 14/102 (13%), Positives = 28/102 (27%), Gaps = 3/102 (2%)
Query: 1421 KKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF 1480
P+ + + Q ++ +S + ++ G + W K +
Sbjct: 4 GSSGPQIIQFPEDQ-KVRAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSE 60
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
+ E G Y N G + + L KP
Sbjct: 61 NGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102
Score = 70.8 bits (174), Expect = 1e-14
Identities = 13/87 (14%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
S P+ + + ++ G+S +T + W K I +K+ +
Sbjct: 3 SGSSGPQIIQFPEDQK-VRAGESVELFGKVTG--TQPITCTWMKFRKQIQESEHMKVENS 59
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ I + G Y N
Sbjct: 60 ENGSKLTILAARQEHCGCYTLLVENKL 86
Score = 69.7 bits (171), Expect = 3e-14
Identities = 12/93 (12%), Positives = 22/93 (23%), Gaps = 3/93 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P +D V V ++ + W + +K
Sbjct: 7 GPQIIQFPED-QKVRAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSENGS 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + G Y NK G+ + +
Sbjct: 64 KLTILAARQEHCGCYTLLVENKLGSRQAQVNLT 96
Score = 68.5 bits (168), Expect = 9e-14
Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG 372
Q + GE + G Q +T ++ K I+ S ++ ++ L IL
Sbjct: 12 QFPEDQKVRAGESVELFGKV--TGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILA 69
Query: 373 TKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT 412
+ E G YT NK G + VNL VD K PP T
Sbjct: 70 ARQEHCGCYTLLVENKLGSRQAQVNLTVVD--KPDPPAGT 107
Score = 63.5 bits (155), Expect = 5e-12
Identities = 14/92 (15%), Positives = 24/92 (26%), Gaps = 19/92 (20%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P I D + + E+V +V G + W K I
Sbjct: 8 PQIIQFPEDQKVRAGESVELFGKVT---------G----------TQPITCTWMKFRKQI 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+K+ + + I + G Y
Sbjct: 49 QESEHMKVENSENGSKLTILAARQEHCGCYTL 80
Score = 62.0 bits (151), Expect = 1e-11
Identities = 10/84 (11%), Positives = 21/84 (25%), Gaps = 2/84 (2%)
Query: 512 DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYA 571
++ V V ++ + W + +K L +
Sbjct: 15 EDQKVRAGESVELFGKVT--GTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQ 72
Query: 572 RDSGEYICRATNKWGTAMTKAKVI 595
G Y NK G+ + +
Sbjct: 73 EHCGCYTLLVENKLGSRQAQVNLT 96
Score = 59.6 bits (145), Expect = 1e-10
Identities = 24/107 (22%), Positives = 32/107 (29%), Gaps = 23/107 (21%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET 1616
P + PE QKV+ GE +VTG W+ I K+ +E
Sbjct: 2 SSGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSEN 61
Query: 1617 --------TEMEHKGK---------------IQERVVDASEKPAKPP 1640
EH G + VVD + PA P
Sbjct: 62 GSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPDPPAGTP 108
Score = 58.9 bits (143), Expect = 2e-10
Identities = 14/64 (21%), Positives = 21/64 (32%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W K + K + L I+ A E G YT+ N GS L
Sbjct: 37 ITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLT 96
Query: 297 CLER 300
+++
Sbjct: 97 VVDK 100
Score = 53.9 bits (130), Expect = 1e-08
Identities = 15/62 (24%), Positives = 23/62 (37%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
W K++ + + L IL +E+ G Y NK GS + +L V
Sbjct: 39 CTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVV 98
Query: 663 SK 664
K
Sbjct: 99 DK 100
Score = 52.3 bits (126), Expect = 3e-08
Identities = 17/131 (12%), Positives = 25/131 (19%), Gaps = 49/131 (37%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLSTAF 1306
P+ I E V+ E V +V ++VE
Sbjct: 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVE------- 57
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
L I E G Y N G
Sbjct: 58 ---------------------------NSENGSKLTILAARQEHCGCYTLLVENKLGSRQ 90
Query: 1367 TKATISCKKIP 1377
+ ++ P
Sbjct: 91 AQVNLTVVDKP 101
Score = 45.8 bits (109), Expect = 7e-06
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
I E CG Y+ N G ++ V K
Sbjct: 66 TILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDK 100
Score = 45.8 bits (109), Expect = 7e-06
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 1848 AVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ P + + +DQ V+ G +V L ++TG
Sbjct: 1 GSSGSSGPQIIQFPEDQKVRAGESVELFGKVTGTQP 36
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix
bundle cytokine, receptor tyrosine kinase glycosylation;
HET: NAG BMA; 3.00A {Homo sapiens}
Length = 292
Score = 110 bits (276), Expect = 2e-26
Identities = 47/282 (16%), Positives = 80/282 (28%), Gaps = 28/282 (9%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
+VE+ P + + +L ++TG Y C +++L
Sbjct: 31 SVEWDGPPSPHWTLYSDGSSS-----ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYV 85
Query: 401 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKNRVK 459
D P + + + + + A C LT E V G+P+
Sbjct: 86 KD-----PARPWNVLAQEVVVFEDQDALLPCLLT-DPVLEAGVSLVRVRGRPLMRHTNYS 139
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSP-----SQDNL 514
GF I + S +Y C A + I + Q +P P L
Sbjct: 140 FSPWHGFT---IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAEL 196
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI--SLDMDYVYAR 572
C D + N A + + +L++D V +
Sbjct: 197 VRIRGEAAQIVCSAS-SVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQ 255
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPH 614
+G Y C A+N G T V+ + H
Sbjct: 256 HAGNYSCVASNVQGKHSTSM-----FFRVVESAGNSHHHHHH 292
Score = 105 bits (262), Expect = 1e-24
Identities = 47/290 (16%), Positives = 75/290 (25%), Gaps = 33/290 (11%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CT---RVTGYPRPRVMWLINGHTIVNE-IVRKITAT--- 1614
PV V+ G C V P W + + T
Sbjct: 5 PVIEPSVPELVVKPGATVTLRCVGNGSVEWDGPPSPHWTLYSDGSSSILSTNNATFQNTG 64
Query: 1615 ------ETTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFE-VEFDGDP 1667
+ I V D + Q FE A + D
Sbjct: 65 TYRCTEPGDPLGGSAAIHLYVKDP------ARPWNVLAQEVVVFEDQDALLPCLLTDPVL 118
Query: 1668 LPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG-KAKCSAN 1726
+ R ++FS + + S + A G S
Sbjct: 119 EAGVSLVRVRGRPL--MRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIR 176
Query: 1727 LVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIP 1785
L V++ G PP+ + V G+ A+ S+ DV+ N K+
Sbjct: 177 LKVQKVIPG------PPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAI 230
Query: 1786 DIRYKTL--EEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ + TL + + + +G Y CVA N G+ V
Sbjct: 231 PQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVV 280
Score = 100 bits (249), Expect = 7e-23
Identities = 48/353 (13%), Positives = 85/353 (24%), Gaps = 107/353 (30%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
PV + + ++ G + VEW P + + D I
Sbjct: 5 PVIEPSVPELV-VKPGATVTLRCVGNGS------VEWDGPPSP-----HWTLYSDGSSSI 52
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE------------------ 808
L + ++ G Y C D + + V+
Sbjct: 53 LSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCL 112
Query: 809 -----------------SQLPKGMEVFISFHE---ISPVYPEDCGQYSCRAYNDYGEAVT 848
L + S I Y C A G V
Sbjct: 113 LTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMG-GRKVM 171
Query: 849 SASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDR 908
S S+++ +
Sbjct: 172 SISIRL-----------------------------------------------------K 178
Query: 909 IEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI 968
+++ + P P +L A C + + D + V HN L+ +
Sbjct: 179 VQKVIPGPPALTLVPAELVRIRGEAAQIVCSAS-SVDVNFDVFLQHNNTKLAIPQQSDFH 237
Query: 969 NDFGFV--ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
N+ L ++ V + +G Y+C A+N G+ +TS V G
Sbjct: 238 NNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVESAGNSHHHH 290
Score = 99.7 bits (248), Expect = 1e-22
Identities = 31/247 (12%), Positives = 65/247 (26%), Gaps = 39/247 (15%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
PV + +G +++W SP + +++ + SIL
Sbjct: 4 IPVIEPSVPELVVKPGATVTLRCVGNG----SVEWDGPP-----SPHWTLYSDGSSSILS 54
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 1758
+++G + + +L V++ + V+ Q
Sbjct: 55 TNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDP---------ARPWNVLAQEVVVFEDQ 105
Query: 1759 LARFDAKISATKP-LDVYWLK-NGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECV 1816
A ++ V ++ G+ ++ Y I A S Y+C
Sbjct: 106 DALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWH---GFTIHRAKFIQSQDYQCS 162
Query: 1817 AMNNAGEAR-CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLK 1875
A+ + L VQ P + + G A +
Sbjct: 163 ALMGGRKVMSISIRLKVQ---------------KVIPGPPALTLVPAELVRIRGEAAQIV 207
Query: 1876 CRITGKP 1882
C +
Sbjct: 208 CSASSVD 214
Score = 97.3 bits (242), Expect = 6e-22
Identities = 46/337 (13%), Positives = 75/337 (22%), Gaps = 88/337 (26%)
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
PS L V V C ++W P T + L +
Sbjct: 8 EPSVPELVVKPGATVTLRCVGN------GSVEWDGPPSPHWTLYSDGSSS-----ILSTN 56
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI--------------------------CKV--- 598
+++G Y C + C +
Sbjct: 57 NATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDP 116
Query: 599 -LTVIVEWFY-NGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
L V G+ L Y G I + S Y+C A ++
Sbjct: 117 VLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKF---IQSQDYQCSALMGGRKVMSI 173
Query: 657 ASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNI 716
+ L+ + P T+ + +
Sbjct: 174 S---------------------------------IRLKVQKV----IPGPPALTLVPAEL 196
Query: 717 DDLREGENAHFEARLTPTDDPK-LKVEWFWNGKPMKTGSR--FRTFCDFGFVILEISPVY 773
GE A + + V N + + F + L + V
Sbjct: 197 V-RIRGEAAQIVC--SASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVD 253
Query: 774 PEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 810
+ G YSC A N G+ TS +V
Sbjct: 254 FQHAGNYSCVASNVQGKHSTSMFFRVVESAGNSHHHH 290
Score = 91.2 bits (226), Expect = 7e-20
Identities = 44/333 (13%), Positives = 88/333 (26%), Gaps = 78/333 (23%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P + +V+ + C N VEW +G P PH ++ D
Sbjct: 4 IPVIEPS--VPELVVKPGATVTLRCVG------NGSVEW--DGPPSPHWTLYS---DGSS 50
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
++ +++G Y C L
Sbjct: 51 SILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLY-------------------------- 84
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGY-PRPRVMWL-ING 1600
V+D A + + V E + A +T V + + G
Sbjct: 85 -----------VKDP----ARPWNVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRG 129
Query: 1601 HTIVNE-----------IVRKITATE------TTEMEHKGKIQERV-VDASEKPAKPPVF 1642
++ + + + + M + + + + + PP
Sbjct: 130 RPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPAL 189
Query: 1643 TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED---FPITSSPDFQIHTFSTKSILIM 1699
T + A+ + + + + I DF + + L +
Sbjct: 190 TLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNL 249
Query: 1700 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
QV + +G ++ +A N GK S V E
Sbjct: 250 DQVDFQHAGNYSCVASNVQGKHSTSMFFRVVES 282
Score = 89.3 bits (221), Expect = 3e-19
Identities = 42/300 (14%), Positives = 76/300 (25%), Gaps = 68/300 (22%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
G P + L +K G + C VEW P + S
Sbjct: 2 GSIPVIEPSVPELV-VKPGATVTLRCVGNG------SVEWDGPPSPHWTLYSDGSSS--- 51
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNN--------FIFIPPFPIFIFHQIRLPSPSQDNLDVP 517
++ ++G Y C + +++ + + V
Sbjct: 52 --ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPW-------NVLAQEVVVF 102
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGE 576
E C L + GRP + GF + S +
Sbjct: 103 EDQDALLPCLL-TDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFT---IHRAKFIQSQD 158
Query: 577 YICRATNKWGTAMT------------------------------KAKVICKV----LTVI 602
Y C A M+ A+++C +
Sbjct: 159 YQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218
Query: 603 VEWFYNGKKLPHGHRYR--TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V +N KL + ++ L++ +++G Y C A+N G T +
Sbjct: 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Score = 86.9 bits (215), Expect = 2e-18
Identities = 41/318 (12%), Positives = 83/318 (26%), Gaps = 83/318 (26%)
Query: 10 KIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKI 69
+EW P S+ LS N+ ++ Y C + L +
Sbjct: 31 SVEWDGPPSPHWTLYSDGSSS-----ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYV 85
Query: 70 EDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFD 129
+D + + +V E+++
Sbjct: 86 KDP-----------------------------------ARPWNVLAQEVVVFEDQDALLP 110
Query: 130 CRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFGFVVMDIA 188
C + E V G+P+ GF I
Sbjct: 111 CLL------------------TDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFT---IH 149
Query: 189 YVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV------------ 236
+ S +Y C + + + + + + L+ LV
Sbjct: 150 RAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCS 209
Query: 237 ------PFTEWFVNNK---PLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKG 287
F + +N +P + F + L++ + +G Y+ A+N +G
Sbjct: 210 ASSVDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQG 269
Query: 288 SATTSGTLKCLERLFVNH 305
+TS + +E +H
Sbjct: 270 KHSTSMFFRVVESAGNSH 287
Score = 83.9 bits (207), Expect = 2e-17
Identities = 37/233 (15%), Positives = 58/233 (24%), Gaps = 46/233 (19%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGSRIKTINDFGFV 974
A + ++ + E A C LT V G+ L + GF
Sbjct: 89 ARPWNVLAQEVVVFEDQDALLPCLLT-DPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFT 147
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
I + S Y C A + S + +K V+ +
Sbjct: 148 I---HRAKFIQSQDYQCSALMGGRK-VMSISIRLK------VQKVIPG------------ 185
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
PP T L C D + N
Sbjct: 186 ------------------PPALTLVPA-ELVRIRGEAAQIVCSAS-SVDVNFDVFLQHNN 225
Query: 1095 RPFATGSRVKTVYDFGFI--SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
A + + +L++D V + +G Y C A+N G T
Sbjct: 226 TKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Score = 81.2 bits (200), Expect = 2e-16
Identities = 56/329 (17%), Positives = 89/329 (27%), Gaps = 66/329 (20%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
PV + ++ K V C S VEW P
Sbjct: 4 IPVIEPSVPELVVKPGATVTLRCVGNGS-----------------------VEWDGPPSP 40
Query: 168 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAK-----------FK 216
+ S ++ ++G Y C PL A +
Sbjct: 41 HWTLYSDGSSS-----ILSTNNATFQNTGTYRCT--EPGDPLGGSAAIHLYVKDPARPWN 93
Query: 217 TTHDFGYVALDIELMLKTLVP-------FTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
V D + +L L+ + V +PL + + G I
Sbjct: 94 VLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSFSPWHG---FTIHR 150
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF- 328
A S Y A G S +++ L+ V P +L L GE A
Sbjct: 151 AKFIQSQDYQCSALMG-GRKVMSISIR-LKVQKVIPGPPALTLVPAELV-RIRGEAAQIV 207
Query: 329 -EASLIPVGDQTMTVEFLYNGK--PIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRA 385
AS + V V +N I ++ L + + G Y+C A
Sbjct: 208 CSASSVDVN---FDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVA 264
Query: 386 TNKWGQAEISVNLECVDKSKGQPPKFTSH 414
+N G+ S+ V+ + H
Sbjct: 265 SNVQGKHSTSMFFRVVE-----SAGNSHH 288
Score = 75.8 bits (186), Expect = 1e-14
Identities = 32/227 (14%), Positives = 52/227 (22%), Gaps = 58/227 (25%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
P + +L + C + +VEW +D IL
Sbjct: 5 PVIEPSVPELVVKPGATVTLRCVG------NGSVEWDGPP-----SPHWTLYSDGSSSIL 53
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
N+ +++G Y C + + L VK
Sbjct: 54 STNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKD-------------------------- 87
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGR 1095
P + L + V E C L + GR
Sbjct: 88 ----------------PARPWNVLAQEVVVFEDQDALLPCLL-TDPVLEAGVSLVRVRGR 130
Query: 1096 PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
P + GF + S +Y C A M+ +
Sbjct: 131 PLMRHTNYSFSPWHGFT---IHRAKFIQSQDYQCSALMGGRKVMSIS 174
Score = 73.5 bits (180), Expect = 8e-14
Identities = 50/312 (16%), Positives = 76/312 (24%), Gaps = 102/312 (32%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
VEW +G PH Y + + +N+G Y C L V
Sbjct: 32 VEW--DGPPSPHWTLYSDGSSSILSTNNAT---FQNTGTYRCTEPGDPLGGSAAIHLY-V 85
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
A + V + + E
Sbjct: 86 ----------------------------------------KDPARPWNVLAQEVV-VFED 104
Query: 723 ENAHFEARLTPTDDPKLKVEWFW---NGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
++A LT DP L+ G+P+ + + GF I
Sbjct: 105 QDALLPCLLT---DPVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKF---IQSQD 158
Query: 780 YSCRAYNDYGEAVT-SASMKVQGKR----SIILESQ---LPKGMEVFIS----------- 820
Y C A + ++ S +KVQ ++ L +G I
Sbjct: 159 YQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFD 218
Query: 821 -----------------FHE----------ISPVYPEDCGQYSCRAYNDYGEAVTSASMK 853
FH + V + G YSC A N G+ TS +
Sbjct: 219 VFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFR 278
Query: 854 VQGKRSIILESQ 865
V
Sbjct: 279 VVESAGNSHHHH 290
Score = 73.1 bits (179), Expect = 1e-13
Identities = 20/142 (14%), Positives = 36/142 (25%), Gaps = 27/142 (19%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
P ++ V+ G + + V W P + + + L
Sbjct: 3 SIPVIEPSVPELVVKPGATVTLRCVGNGS----VEWDGP-----PSPHWTLYSDGSSSIL 53
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEP 1860
A +++G Y C + L V +D A
Sbjct: 54 STNNATFQNTGTYRCTEPGDPLGGSAAIHLYV------------------KDPARPWNVL 95
Query: 1861 LKDQNVKEGSAVTLKCRITGKP 1882
++ V E L C +T
Sbjct: 96 AQEVVVFEDQDALLPCLLTDPV 117
Score = 66.5 bits (162), Expect = 1e-11
Identities = 33/273 (12%), Positives = 61/273 (22%), Gaps = 94/273 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L + ++ G Y C D
Sbjct: 52 ILSTNNATFQNTGTYRCTEPGDPLGG---------------------------------- 77
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMK 1458
++ I+L D P R + Q+ +V Q C
Sbjct: 78 ------SAAIHLYVKD--------PARPWNVL-AQEVVVFEDQDALLPCL-LTDPVLEAG 121
Query: 1459 VEWF-LNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKT 1517
V + G+PL ++ G+ S +Y C A + +I
Sbjct: 122 VSLVRVRGRPLMRHTNYSFSPWHGFTIHR---AKFIQSQDYQCSALMGGRKVMSISI--- 175
Query: 1518 TGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEG 1577
+L + P P G
Sbjct: 176 ----------------------------------RLKVQKVIPGPPALTLVPAELVRIRG 201
Query: 1578 EPARF-CTRVTGYPRPRVMWLINGHTIVNEIVR 1609
E A+ C+ + ++L + +T + +
Sbjct: 202 EAAQIVCS-ASSVDVNFDVFLQHNNTKLAIPQQ 233
Score = 61.5 bits (149), Expect = 6e-10
Identities = 36/272 (13%), Positives = 66/272 (24%), Gaps = 69/272 (25%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLI 1319
+ + + + V V E + + DP L SL P
Sbjct: 85 VKDPARPWNVLAQEVVVFEDQDALLPCLLT---DPVLEAGVSLVRVRGRP---------- 131
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
++ + I +Y C A +
Sbjct: 132 -------LMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRK--------------- 169
Query: 1380 QLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVE 1439
+ I L + PP T + + +
Sbjct: 170 ------------------------VMSISIRLK----VQKVIPGPPAL-TLVPAELVRIR 200
Query: 1440 MQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAM---NFGWVYPEDSG 1496
++ + C A D N V N L + + ++ Y + N V + +G
Sbjct: 201 GEAAQIVCS-ASSVDVNFDVFLQHNNTKLAIPQQSD-FHNNRYQKVLTLNLDQVDFQHAG 258
Query: 1497 EYLCRATNLYGMDETRAILKTTGKPGIIYESQ 1528
Y C A+N+ G T + G +
Sbjct: 259 NYSCVASNVQGKHSTSMFFRVVESAGNSHHHH 290
Score = 60.4 bits (146), Expect = 1e-09
Identities = 23/199 (11%), Positives = 44/199 (22%), Gaps = 55/199 (27%)
Query: 6 DPNLKIEWFK-NGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+ + G PL + + G I+ + S Y C A + +S
Sbjct: 117 VLEAGVSLVRVRGRPLMRHTNYSFSPWHGFT---IHRAKFIQSQDYQCSALMGGRKVMS- 172
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
+R +++ P ++ E
Sbjct: 173 ------------------------------ISIRLKVQKVIPGPPALTLVPAELVRIRGE 202
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
C D V HN + + ++ V
Sbjct: 203 AAQIVCSAS---------S---------VDVNFDVFLQHNNTKLAIPQQSDFHNNRYQKV 244
Query: 185 MD--IAYVQSHDSGEYVCQ 201
+ + V +G Y C
Sbjct: 245 LTLNLDQVDFQHAGNYSCV 263
Score = 53.8 bits (129), Expect = 2e-07
Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDSAIYTCKATNLLGEAVS 63
D N + N L++ + + TL+++ + + Y+C A+N+ G+ +
Sbjct: 214 DVNFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHST 273
Query: 64 TCTLKIEDR 72
+ ++ +
Sbjct: 274 SMFFRVVES 282
Score = 39.6 bits (92), Expect = 0.008
Identities = 13/93 (13%), Positives = 21/93 (22%), Gaps = 12/93 (12%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PV L V V C ++W P T +
Sbjct: 4 IPVIEPS-VPELVVKPGATVTLRCVGN------GSVEWDGPPSPHWTLYSDGSSS----- 51
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + +++G Y C +
Sbjct: 52 ILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLY 84
Score = 30.7 bits (69), Expect = 4.1
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITGK 1881
P + + + VK G+ VTL+C G
Sbjct: 2 GSIPVIEPSVPELVVKPGATVTLRCVGNGS 31
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm,
cytoskeleton, disease mutation, immunoglobulin domain;
NMR {Homo sapiens}
Length = 116
Score = 104 bits (260), Expect = 3e-26
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Query: 904 EREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS 963
+ +AP F+ P + E EC+ + P + W N + + +
Sbjct: 3 HHHHHHSHEHKRAPMFIYKPQSKKVLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNT 60
Query: 964 RIKTI--NDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
++ ++ G V L I DV +D+G YT A N+ G T + +L V R
Sbjct: 61 DRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTAR 110
Score = 94.8 bits (236), Expect = 6e-23
Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 1719 GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWL 1777
G + + P F+ S + G + + +ISA P ++W
Sbjct: 2 GHHHHHHSHEHKR----------APMFIYKPQSKKVLEGDSVKLECQISAIPPP-KLFWK 50
Query: 1778 KNGKKIIPDIRYKTLEEDN--LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+N + + + +L +DN TLLI + +D+G Y A+N AG C L V ++
Sbjct: 51 RNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTAR 110
Query: 1836 KAPGKQAP 1843
P + P
Sbjct: 111 --PNQTLP 116
Score = 91.3 bits (227), Expect = 8e-22
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + + P+F K Q + E D + E + P P + W R + + + D
Sbjct: 8 HSHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQ 67
Query: 1692 ST--KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+ L+++ V +D+G + V A N G C+ L V +
Sbjct: 68 DNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTAR 110
Score = 88.6 bits (220), Expect = 7e-21
Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF 756
EH++AP+F + + EG++ E + + P K+ W N + ++ +
Sbjct: 6 HHHSHEHKRAPMFIYKPQSKK-VLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNTDR 62
Query: 757 RTFC--DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL 807
+ + G V L I V +D G Y+ A N+ G + + V + + L
Sbjct: 63 ISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQTL 115
Score = 75.5 bits (186), Expect = 3e-16
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
Query: 1047 DEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 1106
E P+F + Q V E V +C+ + P ++ W N + ++
Sbjct: 9 SHEHKRAPMFIYKPQS-KKVLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNTDRISL 65
Query: 1107 Y--DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIV 1153
Y + G ++L + V +D+G Y A N+ G ++ A+ +
Sbjct: 66 YQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQT 114
Score = 74.4 bits (183), Expect = 8e-16
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP 1476
E K+ P F+ + Q + V S K ECQ P K+ W N + +
Sbjct: 9 SHEHKRAPMFIYKP--QSKKVLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNTDRIS 64
Query: 1477 IY--DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGII 1524
+Y + G V + V +D+G Y A N G+ L T +P
Sbjct: 65 LYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDVTARPNQT 114
Score = 69.0 bits (169), Expect = 5e-14
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTF--DFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
A P K+ W +N + + S + + G VTL I + D+ YT A N G
Sbjct: 40 SAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVT 99
Query: 62 VSTCTLKIEDR 72
L + R
Sbjct: 100 TCNTRLDVTAR 110
Score = 64.0 bits (156), Expect = 4e-12
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 390 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG 449
G + E + P F +S + + +GDS EC ++ P K+ W N
Sbjct: 2 GHHHHHHSHE-----HKRAPMFIYKPQSKK-VLEGDSVKLECQIS--AIPPPKLFWKRNN 53
Query: 450 KPI-FHKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVCRAWN 488
+ + F+ +R+ + D G V + I V D+G Y A N
Sbjct: 54 EMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVN 94
Score = 62.8 bits (153), Expect = 9e-12
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 1556 DEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
+ K AP+F+ +P+++KV EG+ + +++ P P++ W N + R
Sbjct: 9 SHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISL 65
Score = 62.0 bits (151), Expect = 2e-11
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 9/93 (9%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY--DFGFISLDMDYVY 570
+ V E V +C+ + P ++ W N + ++Y + G ++L + V
Sbjct: 24 SKKVLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVN 81
Query: 571 ARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+D+G Y A N+ G + L V
Sbjct: 82 KKDAGWYTVSAVNEAGVTTCNTR-----LDVTA 109
Score = 60.5 bits (147), Expect = 6e-11
Identities = 25/128 (19%), Positives = 41/128 (32%), Gaps = 31/128 (24%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV--EPRVDPRLR-----VECSLSTAFFFPFINI 1313
+ P FI + +S V E + V+ E ++ P P+L +T + +
Sbjct: 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPP--PKLFWKRNNEMVQFNTDRISLYQD- 68
Query: 1314 STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISC 1373
+ G V+L I V +D G Y A N+ G +
Sbjct: 69 ---------------------NTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLDV 107
Query: 1374 KKIPTIQL 1381
P L
Sbjct: 108 TARPNQTL 115
Score = 60.1 bits (146), Expect = 7e-11
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 21/95 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P+FI + E ++V +C++ P K+ W N + +
Sbjct: 16 PMFIYKPQSKKVLEGDSVKLECQIS---------A----------IPPPKLFWKRNNEMV 56
Query: 169 -FHKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVCQ 201
F+ +R+ + D G V + I V D+G Y
Sbjct: 57 QFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVS 91
Score = 58.2 bits (141), Expect = 4e-10
Identities = 21/109 (19%), Positives = 34/109 (31%), Gaps = 14/109 (12%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAF 363
P+F + EG+ E + + N + ++ +
Sbjct: 16 PMFI---YKPQSKKVLEGDSVKLECQ--ISAIPPPKLFWKRNNEMVQFNTDRISLYQDNT 70
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT 412
G V L I +D G YT A N+ G + L+ V P T
Sbjct: 71 GRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRLD-VT----ARPNQT 114
Score = 55.1 bits (133), Expect = 5e-09
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 241 WFVNNKPLPAGAKFKTTH--DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W NN+ + + + + G V L I +D+G YTV A N G T + L
Sbjct: 49 WKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRL 105
Score = 53.2 bits (128), Expect = 2e-08
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 603 VEWFYNGKKL-PHGHRYRTFHD-FGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W N + + + R + D G V L I ++++G Y A N+ G L
Sbjct: 47 LFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTVSAVNEAGVTTCNTRL 105
Score = 44.7 bits (106), Expect = 2e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 1847 AAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ AP + + V EG +V L+C+I+ P
Sbjct: 8 HSHEHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPP 44
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 110
Score = 103 bits (259), Expect = 4e-26
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 4/99 (4%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI--NDF 971
AP F + E F CR+ +P + WF +GK +S S TI +
Sbjct: 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLD 63
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
G L L D G YT A N G + + +L V+
Sbjct: 64 GTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQA 102
Score = 101 bits (253), Expect = 3e-25
Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 8/115 (6%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + P F K++ + FE F G+P P I WF++ I+ D
Sbjct: 1 GSSGSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQR 60
Query: 1692 STKSI--LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 1744
L ++D G + ++A N G+ C+ L+V+ G P S
Sbjct: 61 DLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSG------PSS 109
Score = 95.5 bits (238), Expect = 3e-23
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL--EEDNLFT 1799
P F + I G F +++ +YW K+GK+I P + T+ + D +
Sbjct: 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCS 67
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
L + ++D G Y +A N G C L+VQ+ +
Sbjct: 68 LHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNSG 106
Score = 90.1 bits (224), Expect = 2e-21
Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT--FCDF 762
AP F + L + + EG F R+ +PK K+ WF +GK + S T
Sbjct: 7 GAPFFEMKLKHYK-IFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLD 63
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
G L + +D G Y+ A N G + + VQ S
Sbjct: 64 GTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVNS 105
Score = 73.9 bits (182), Expect = 9e-16
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 1423 QPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY--D 1479
P F ++ + + E F C++ G+P K+ WF +GK + K+ I
Sbjct: 7 GAPFFEMKL--KHYKIFEGMPVTFTCRV--AGNPKPKIYWFKDGKQISPKSDHYTIQRDL 62
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
G +++ +D G Y A N G L
Sbjct: 63 DGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLMVQAVN 104
Score = 73.5 bits (181), Expect = 1e-15
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTF--DFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+P KI WFK+G +S S + G +L + DD YT A N G
Sbjct: 33 AGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRI 92
Query: 62 VSTCTLKIED 71
T L ++
Sbjct: 93 SCTGRLMVQA 102
Score = 72.4 bits (178), Expect = 3e-15
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY- 1107
P F +L+ + E V F CR+ +P +I WF +G+ + S T+
Sbjct: 4 GSSGAPFFEMKLKH-YKIFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQR 60
Query: 1108 -DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
G SL D G Y A N G +++
Sbjct: 61 DLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLM 99
Score = 69.7 bits (171), Expect = 3e-14
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 5/88 (5%)
Query: 403 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS 462
P F +K + + +G F C + +P+ K+ WF +GK I K+ +
Sbjct: 3 SGSSGAPFFEMKLKHYK-IFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQ 59
Query: 463 --DFGFVVMDIAYVQSHDSGEYVCRAWN 488
G + D G Y A N
Sbjct: 60 RDLDGTCSLHTTASTLDDDGNYTIMAAN 87
Score = 63.9 bits (156), Expect = 3e-12
Identities = 22/94 (23%), Positives = 30/94 (31%), Gaps = 21/94 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F L + E V F CRV G +P+ K+ WF +GK I
Sbjct: 9 PFFEMKLKHYKIFEGMPVTFTCRVA---------G----------NPKPKIYWFKDGKQI 49
Query: 169 FHKNRVKMVS--DFGFVVMDIAYVQSHDSGEYVC 200
K+ + G + D G Y
Sbjct: 50 SPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTI 83
Score = 62.8 bits (153), Expect = 9e-12
Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 33/126 (26%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV----EPRV----DPRLRVECSLSTAFFFPFIN 1312
P F +++ + E PV F RV +P++ D + I+
Sbjct: 5 SSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQ--------------IS 50
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+ G SL +D G Y A N G +
Sbjct: 51 PKSDHYTIQRD-----------LDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLM 99
Query: 1373 CKKIPT 1378
+ + +
Sbjct: 100 VQAVNS 105
Score = 62.4 bits (152), Expect = 1e-11
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY--DFGFISLDMDYVY 570
+ + E V F CR+ +P +I WF +G+ + S T+ G SL
Sbjct: 17 HYKIFEGMPVTFTCRVA--GNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTAST 74
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI 595
D G Y A N G +++
Sbjct: 75 LDDDGNYTIMAANPQGRISCTGRLM 99
Score = 60.1 bits (146), Expect = 7e-11
Identities = 23/106 (21%), Positives = 34/106 (32%), Gaps = 10/106 (9%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAF 363
P F L + EG F + G+ + + +GK I H
Sbjct: 9 PFFE---MKLKHYKIFEGMPVTFTCRV--AGNPKPKIYWFKDGKQISPKSDHYTIQRDLD 63
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
G L + ++D G YT A N G+ + L V P
Sbjct: 64 GTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRLM-VQAVNSGPS 108
Score = 59.7 bits (145), Expect = 1e-10
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTH--DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
P WF + K + + T G +L + +D G YT+ A N +G + +G
Sbjct: 38 PKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGR 97
Query: 295 L 295
L
Sbjct: 98 L 98
Score = 58.9 bits (143), Expect = 2e-10
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 1558 KPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
AP F + + K+ EG P F RV G P+P++ W +G I +
Sbjct: 4 GSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPK 52
Score = 55.8 bits (135), Expect = 2e-09
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 603 VEWFYNGKKL-PHGHRYRTFHD-FGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ WF +GK++ P Y D G L ++ G Y A N G L
Sbjct: 40 IYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMAANPQGRISCTGRL 98
Score = 46.6 bits (111), Expect = 4e-06
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 1847 AAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ AP LK + EG VT CR+ G P+
Sbjct: 1 GSSGSSGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPK 37
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human
coxsackievirus A21, cryo-electron
microscopy,virus-receptor complex, icosahedral virus;
HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3
b.1.1.4 b.1.1.4 b.1.1.4
Length = 450
Score = 113 bits (282), Expect = 4e-26
Identities = 58/495 (11%), Positives = 109/495 (22%), Gaps = 122/495 (24%)
Query: 351 IEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPK 410
IE + + G + +++ C + GQ+ L P+
Sbjct: 33 IETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVY-----WTPE 87
Query: 411 FTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 469
G + C + L V K + + V + V
Sbjct: 88 RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREP---AVGEPAEVTT 144
Query: 470 DIAYVQSHDSGEYVCRAWNNFI---------FIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
+ + H + CR + P+ + F P +
Sbjct: 145 TVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDT 204
Query: 521 KVHFDCRLE---PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY 577
+ C L+ P S+ + + + T + F + V A D G
Sbjct: 205 QGTVVCSLDGLFPVSEAQVH--LALGDQRL---NPTVTYGNDSFSAKASVSVTAEDEGTQ 259
Query: 578 --ICRATNKWGTAMTKAKVICKVL----------------------------TVIVEWFY 607
C + T V V +
Sbjct: 260 RLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVP 319
Query: 608 NGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNL 667
P L + E+N + C AT +
Sbjct: 320 AQPLGPRAQ------------LLLKATPEDNGRSFSCSATLEVAG--------------- 352
Query: 668 ILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNID-DLREGENAH 726
+ + +T ++ P + E
Sbjct: 353 -----------------------QLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQT 389
Query: 727 FEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYN 786
+ +P +++ +G I E V + G Y CRA +
Sbjct: 390 PMCQ--AWGNPLPELKCLKDGTFPLP-------------IGESVTVTRDLEGTYLCRARS 434
Query: 787 DYGEAVTSASMKVQG 801
GE ++ V
Sbjct: 435 TQGEVTREVTVNVLS 449
Score = 95.3 bits (236), Expect = 2e-20
Identities = 55/432 (12%), Positives = 102/432 (23%), Gaps = 85/432 (19%)
Query: 272 AEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEAS 331
++ + G +T L + P S G+
Sbjct: 57 VQEDSQPMCYSNCPDGQSTAKTFLTV-------YWTPERVELAPLPSWQPVGKNLTLRCQ 109
Query: 332 LIPVG-DQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 390
+ +TV L K + R V V +L + ++CR
Sbjct: 110 VEGGAPRANLTVVLLRGEKEL---KREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLR 166
Query: 391 QAEISVNLECVDKSKGQ---PPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWF 446
+ + + Q P + S L+ C+L + E +V
Sbjct: 167 PQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLA 226
Query: 447 HNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEY--VCRAWNNFIFIPPFPIFIFHQI 504
+ + N + F V + D G C +
Sbjct: 227 LGDQRL---NPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSF 283
Query: 505 RLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISL 564
P+ +V E +V C P+ + ++ G R L
Sbjct: 284 PAPNVILTKPEVSEGTEVTVKCEAHPR--AKVTLNGVPAQPL---GPRA---------QL 329
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI---------------------- 602
+ + + C AT + K + L V+
Sbjct: 330 LLKATPEDNGRSFSCSATLEVA-GQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQ 388
Query: 603 -------------VEWFYNGKK-LPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
++ +G LP G + G Y CRA +
Sbjct: 389 TPMCQAWGNPLPELKCLKDGTFPLPIGESVTV--------------TRDLEGTYLCRARS 434
Query: 649 KYGSDVTKASLK 660
G + ++
Sbjct: 435 TQGEVTREVTVN 446
Score = 95.3 bits (236), Expect = 3e-20
Identities = 57/571 (9%), Positives = 121/571 (21%), Gaps = 185/571 (32%)
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 562
Q + SPS + +P G V C + I+ + + G
Sbjct: 1 QTSV-SPS--KVILPRGGSVLVTCSTSCDQPMLLGIETPLPKK---------ELLLPGNN 48
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI--------------------------C 596
+ ++ + +C + G + K + C
Sbjct: 49 RKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRC 108
Query: 597 KVLTV------IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
+V V K+L R + V +L + + + CR
Sbjct: 109 QVEGGAPRANLTVVLLRGEKEL---KREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDL 165
Query: 651 GSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFT 710
+ + ++ P
Sbjct: 166 RPQGLELFE----------------------------------NTSAPYQLQTFVLPATP 191
Query: 711 VPLSNIDDLREGENAHFEARLT---PTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVIL 767
L + L L P + +V + + + F
Sbjct: 192 PQLVSPRVLEVDTQGTVVCSLDGLFPV--SEAQVHLALGDQRLNPTVTYGND-SFSAKAS 248
Query: 768 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK---RSIILESQLPKGMEVFI----- 819
E + +C T ++ + I+ + ++ +G EV +
Sbjct: 249 VSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAH 308
Query: 820 ------------------SFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 861
+ + ++ +SC A + + ++
Sbjct: 309 PRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVA------GQLIHKNQTRE 362
Query: 862 LESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFL- 920
L P
Sbjct: 363 LRVLYG-------------------------------------------------PRLDE 373
Query: 921 -TTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEIN 979
P + T E++ C+ +P ++ +G T+
Sbjct: 374 RDCPGNWTWPENSQQTPMCQ--AWGNPLPELKCLKDGTFPLPIGESVTVT---------- 421
Query: 980 DVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
G Y C+A + GE T + V
Sbjct: 422 ---RDLEGTYLCRARSTQGEVTREVTVNVLS 449
Score = 94.6 bits (234), Expect = 5e-20
Identities = 47/481 (9%), Positives = 100/481 (20%), Gaps = 115/481 (23%)
Query: 1431 IKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW 1489
+ ++ S C + + +E L K L +Y+ V
Sbjct: 4 VSPSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGNNRKVYELSNV------ 57
Query: 1490 VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHT 1549
++ + +C + G + L P
Sbjct: 58 ---QEDSQPMCYSNCPDGQSTAKTFLTVYWTP---------------------------- 86
Query: 1550 PEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR--VMWLINGHTIVNE 1606
P G+ C G PR V+ L + E
Sbjct: 87 -------------ERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE 133
Query: 1607 IVRKITATET-----TEMEHKGKIQ-----------ERVVDASEKPAKPPVFTK------ 1644
A T H + + + P + F
Sbjct: 134 PAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQ 193
Query: 1645 KIQPCRAFEQDQARFEVEFDGD---PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 1701
+ P Q DG + D + + + +FS K+ + +
Sbjct: 194 LVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVT- 252
Query: 1702 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLAR 1761
E + + + + P+ ++ ++ G
Sbjct: 253 AEDEGTQRLTCAVILGNQSQETLQTVTIY----------SFPAPNVILTKPEVSEGTEVT 302
Query: 1762 FDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNA 1821
+ + + + LL+ ++ ++ C A
Sbjct: 303 VKCEAHPRAKVTLNGVPAQP------------LGPRAQLLLKATPEDNGRSFSCSATLEV 350
Query: 1822 GEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGK 1881
+ + + + E S T C+ G
Sbjct: 351 AGQLIHKNQTRELRV----LYGPR---------LDERDCPGNWTWPENSQQTPMCQAWGN 397
Query: 1882 P 1882
P
Sbjct: 398 P 398
Score = 92.6 bits (229), Expect = 2e-19
Identities = 45/435 (10%), Positives = 90/435 (20%), Gaps = 92/435 (21%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVG-DPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
P V ++ CQ+ N+ V K L + +
Sbjct: 84 WTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVG---EPA 140
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
V + CR P+G++ E
Sbjct: 141 EVTTTVLVRRDHHGANFSCRTELDLR----------------------PQGLELFENTSA 178
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQK-VQEGEPARFCTRVTG---YPRPRVMWL 1597
P Q + + ++ + G +V
Sbjct: 179 PYQLQTFVL------------PATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLA 226
Query: 1598 INGHTIVNEIVRK-----ITATETTEMEHKGKIQERVVDASEKPAK-----------PPV 1641
+ + + A+ + E +G Q P
Sbjct: 227 LGDQRLNPTVTYGNDSFSAKASVSVTAEDEG-TQRLTCAVILGNQSQETLQTVTIYSFPA 285
Query: 1642 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 1701
+ E + + E T+ + L+++
Sbjct: 286 PNVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPR------------AQLLLKA 333
Query: 1702 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI--SSAVINVGQL 1759
++ F+ A N E + + P +
Sbjct: 334 TPEDNGRSFSCSATLEVAGQLIHKNQTRELR------VLYGPRLDERDCPGNWTWPENSQ 387
Query: 1760 ARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMN 1819
+ ++ LK+G +P + + G Y C A +
Sbjct: 388 QTPMCQAWGNPLPELKCLKDGTFPLP-------------IGESVTVTRDLEGTYLCRARS 434
Query: 1820 NAGEARCEAELVVQS 1834
GE E + V S
Sbjct: 435 TQGEVTREVTVNVLS 449
Score = 92.2 bits (228), Expect = 3e-19
Identities = 63/509 (12%), Positives = 119/509 (23%), Gaps = 130/509 (25%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
L IE L L G + + C + G++ +
Sbjct: 29 MLLGIETPLPKKELLLP---------GNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTF 79
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
L + PE V +P +N+
Sbjct: 80 LTVYWT-----------------------------PERVELAP------LPSWQPVGKNL 104
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
C+VE P L V K + + V + V
Sbjct: 105 TLRCQVEGGA--------------PR--ANLTVVLLRGEKELKREP---AVGEPAEVTTT 145
Query: 187 IAYVQSHDSGEYVCQ-------------------------WFVNNKPLPAGAKFKTTHDF 221
+ + H + C+ P +
Sbjct: 146 VLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQ 205
Query: 222 GYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIY--T 279
G V ++ + + ++ L T + + A V AED G T
Sbjct: 206 GTVVCSLDGLFPVSEAQVHLALGDQRLNP---TVTYGNDSFSAKASVSVTAEDEGTQRLT 262
Query: 280 VKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQT 339
S T T+ +++P ++ +SEG + P
Sbjct: 263 CAVILGNQSQETLQTVTI-------YSFPAPNVILTK-PEVSEGTEVTVKCEAHPR--AK 312
Query: 340 MTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+T+ + + L + T ++ ++C AT + I N
Sbjct: 313 VTLNGVPAQPLGPRAQ------------LLLKATPEDNGRSFSCSATLEVAGQLIHKNQT 360
Query: 400 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 459
+ P + C +P +++ +G
Sbjct: 361 RELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAW--GNPLPELKCLKDGTFPLP----- 413
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ + V G Y+CRA +
Sbjct: 414 --------IGESVTVTRDLEGTYLCRARS 434
Score = 89.2 bits (220), Expect = 2e-18
Identities = 62/507 (12%), Positives = 115/507 (22%), Gaps = 105/507 (20%)
Query: 131 RVEPSKDATMKIGK---LLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDI 187
V PS + G + C+ + L +E K + V ++
Sbjct: 3 SVSPS-KVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGN-------NRKVYEL 54
Query: 188 AYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDF-----------GYVALDIELMLKTLV 236
+ VQ + + +C + N + AK T + + + L L+ V
Sbjct: 55 SNVQ--EDSQPMC--YSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQV 110
Query: 237 P-------FT-EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGS 288
T K L + V ++ ++ +
Sbjct: 111 EGGAPRANLTVVLLRGEKELKREP---AVGEPAEVTTTVLVRRDHHGANFSCRTELDLRP 167
Query: 289 ATTSGTLKCLERLFVNHNY-PLFSLQFQHLSNLSEGEIAHFE---ASLIPVGDQTMTVEF 344
+ P Q L L PV V
Sbjct: 168 QGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPV--SEAQVHL 225
Query: 345 LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY--TCRATNKWGQAEISVNLECVD 402
+ + + T + ED G TC E +
Sbjct: 226 ALGDQRL---NPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY- 281
Query: 403 KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVS 462
P + E + +G +C P ++ + R +++
Sbjct: 282 ----SFPAPNVILTKPE-VSEGTEVTVKCEAHPR--AKVTLNGVPAQPLG---PRAQLL- 330
Query: 463 DFGFVVMDIAYVQSHDSGEYVCRAWNNF--------------IFIPPFPIFIFHQIRLPS 508
+ + + C A + P + P
Sbjct: 331 --------LKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGP----RLDERDCPG 378
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
N PE + C + +P + +G TV
Sbjct: 379 ----NWTWPENSQQTPMC--QAWGNPLPELKCLKDGTFPLPIGESVTVT----------- 421
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVI 595
G Y+CRA + G + V
Sbjct: 422 --RDLEGTYLCRARSTQGEVTREVTVN 446
Score = 88.8 bits (219), Expect = 3e-18
Identities = 52/457 (11%), Positives = 97/457 (21%), Gaps = 88/457 (19%)
Query: 694 RRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLT-PTDDPKLKVEWFWNGKPMKT 752
+ T + P G+N ++ L V K +K
Sbjct: 73 QSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132
Query: 753 GSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS--IILESQ 810
+ V + +SCR D +
Sbjct: 133 EPAVG---EPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA 189
Query: 811 LPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPK-- 868
P + + C + + + + +R +
Sbjct: 190 TPPQLVSPRVLEVDTQG------TVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSF 243
Query: 869 GMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTL 928
+ ++ AE EG + +E + P T +
Sbjct: 244 SAKASVSVTAEDEGTQRLT--------CAVILGNQSQETLQTVTIYSFPAPNVILTKPEV 295
Query: 929 AESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGL 988
+E T +C P +T+ L + +
Sbjct: 296 SEGTEVTVKCEAHPR--AKVTLNGVPAQPLGPRAQ------------LLLKATPEDNGRS 341
Query: 989 YTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDE 1048
++C AT + T + + V LY
Sbjct: 342 FSCSATLEVAGQLIHKNQTRE----LRV---------------------LYG-------- 368
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
P + N PE + C + +P + +G T
Sbjct: 369 ----PRLDERDCPGNWTWPENSQQTPMC--QAWGNPLPELKCLKDGTFPLPIGESVT--- 419
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
V G Y+CRA + G + V
Sbjct: 420 ----------VTRDLEGTYLCRARSTQGEVTREVTVN 446
Score = 84.2 bits (207), Expect = 1e-16
Identities = 47/334 (14%), Positives = 80/334 (23%), Gaps = 44/334 (13%)
Query: 1568 QPEAQKVQEGEPARF-CTRVTGYPRPRVMWLI-NGHTIVNEIVRKITATETTEMEHKGKI 1625
P + G C+ + + + E + ++ +
Sbjct: 5 SPSKVILPRGGSVLVTCS-TSCDQPMLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQP 63
Query: 1626 QERVVDASEK---------PAKPPVFTKKIQPCRAFEQDQARFE--VEFDGDPLP--TIK 1672
+ P P VE G P T+
Sbjct: 64 MCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVE-GGAPRANLTVV 122
Query: 1673 WFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
R + + P T ++L+ R F+ E
Sbjct: 123 LLRGEKELKREPAVGEPAEVTTTVLVRRD---HHGANFSCRTELDLRPQGLELFENTSAP 179
Query: 1733 RQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP---LDVYWLKNGKKIIPDIRY 1789
Q V+P + +S V+ V + P V+ +++ P +
Sbjct: 180 YQLQTF-VLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV-- 236
Query: 1790 KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAV 1849
T D+ + ED G G E V P
Sbjct: 237 -TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFP----------- 284
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
AP V L V EG+ VT+KC + +
Sbjct: 285 ----APNVI--LTKPEVSEGTEVTVKCEAHPRAK 312
Score = 81.1 bits (199), Expect = 1e-15
Identities = 49/506 (9%), Positives = 108/506 (21%), Gaps = 143/506 (28%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G S C+ + L +E K + V +++ VQ + + +
Sbjct: 14 GGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGN-------NRKVYELSNVQ--EDSQPM 64
Query: 484 CRAWNNFIFI-PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE-PKSDPTMRIDWF 541
C + + ++ + P + C++E + +
Sbjct: 65 CYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLL 124
Query: 542 FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN------------------ 583
+ V ++ + + CR
Sbjct: 125 RGEKELKREPAVGEP---AEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQ 181
Query: 584 ----------------KWGTAMTKAKVICKVL------TVIVEWFYNGKKLPHGHRYRTF 621
+ T+ V+C + V ++L + T+
Sbjct: 182 LQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL---NPTVTY 238
Query: 622 HDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGL 681
+ + E+ G G+ +
Sbjct: 239 GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ---------------------- 276
Query: 682 EKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKV 741
T I AP + + EG + P K+ +
Sbjct: 277 ----------------TVTIYSFPAPNVILTKPEVS---EGTEVTVKCEAHPR--AKVTL 315
Query: 742 EWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAV----TSASM 797
L + ++ +SC A + + + +
Sbjct: 316 NGVPAQPLGPRAQ------------LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTREL 363
Query: 798 KVQGKRSIILESQ-----LPKGMEVFIS----------------------FHEISPVYPE 830
+V + P+ + E V +
Sbjct: 364 RVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRD 423
Query: 831 DCGQYSCRAYNDYGEAVTSASMKVQG 856
G Y CRA + GE ++ V
Sbjct: 424 LEGTYLCRARSTQGEVTREVTVNVLS 449
Score = 77.6 bits (190), Expect = 1e-14
Identities = 46/398 (11%), Positives = 83/398 (20%), Gaps = 73/398 (18%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
NL + + L + VT ++ R A ++C+ L
Sbjct: 117 ANLTVVLLRGEKELKREPAVGEP---AEVTTTVLVRRDHHGANFSCRTELDLRP------ 167
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC-KENEN 125
+ LE + F P L + +
Sbjct: 168 ----------------------QGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQ 205
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
C ++ E +V + + N + F
Sbjct: 206 GTVVCSLDGLFPV----------------SEAQVHLALGDQRL---NPTVTYGNDSFSAK 246
Query: 186 DIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGY----VALDIELMLKTLVPFTEW 241
V + D G V T + E+ T V
Sbjct: 247 ASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCE 306
Query: 242 FVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERL 301
+ + L + ++ ++ AT L
Sbjct: 307 -AHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQ--TREL 363
Query: 302 FVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVH 361
V + L E G+ ++ L +G TV
Sbjct: 364 RVLYGPRLDERDCPGNWTWPENSQQTPMCQ--AWGNPLPELKCLKDGTFPLPIGESVTV- 420
Query: 362 AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ G Y CRA + G+ V +
Sbjct: 421 ------------TRDLEGTYLCRARSTQGEVTREVTVN 446
Score = 75.7 bits (185), Expect = 5e-14
Identities = 61/603 (10%), Positives = 123/603 (20%), Gaps = 169/603 (28%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDV 981
+P+ + L C + + +E K L + E+++V
Sbjct: 5 SPSKVILPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGN-------NRKVYELSNV 57
Query: 982 YLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRK 1041
++ C + G++T LTV
Sbjct: 58 --QEDSQPMCYSNCPDGQSTAKTFLTV--------------------------------- 82
Query: 1042 DELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE-PKSDPTMRIDWFFNGRPFATG 1100
P P + C++E + + +
Sbjct: 83 ---------YWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKRE 133
Query: 1101 SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPD 1160
V ++ + + CR + + S
Sbjct: 134 PAVGEP---AEVTTTVLVRRDHHGANFSCRTELD---------LRPQGLELFENTSAPYQ 181
Query: 1161 SMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--DSELSEYQKERAN 1218
+ + +P +E D L+ + Q D L+ +
Sbjct: 182 LQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGND 241
Query: 1219 ESTELEKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIP---EEPPRFITEIESVT 1275
+ + E + ++ + +E P +
Sbjct: 242 SFSAKASVSVTAEDEGTQRLTCA-------VILGNQSQETLQTVTIYSFPAPNVILTKPE 294
Query: 1276 VQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFD 1335
V E V + PR L
Sbjct: 295 VSEGTEVTVKCEAHPRAKVTLN-------------------------------GVPAQPL 323
Query: 1336 LGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEAL 1395
L + ++ + C A + + +L+
Sbjct: 324 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQT------RELRVLYG--------- 368
Query: 1396 IQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQ-LVEMQSTKFECQLAPVGD 1454
PR + + E CQ G+
Sbjct: 369 -----------------------------PRLDERDCPGNWTWPENSQQTPMCQ--AWGN 397
Query: 1455 PNMKVEWFLNGK-PLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRA 1513
P +++ +G PLP V + G YLCRA + G
Sbjct: 398 PLPELKCLKDGTFPLPIGESVT--------------VTRDLEGTYLCRARSTQGEVTREV 443
Query: 1514 ILK 1516
+
Sbjct: 444 TVN 446
Score = 56.4 bits (135), Expect = 5e-08
Identities = 32/265 (12%), Positives = 60/265 (22%), Gaps = 49/265 (18%)
Query: 902 GHEREDRIEEDLGKAPEFLT-TPTDLTLAESTLAHFECRLTPTN-DPSMTVEWFHNGKAL 959
+ + + PE + P C++ ++TV K L
Sbjct: 71 DGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKEL 130
Query: 960 SAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
+ V + ++C+ QG+++
Sbjct: 131 KREPAVGEP---AEVTTTVLVRRDHHGANFSCRTELDLRP------------QGLELFEN 175
Query: 1020 VSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE 1079
SA + T P QL + + C L+
Sbjct: 176 TSAPYQLQTF----------------------VLPATPPQLVSPRVLEVDTQGTVVCSLD 213
Query: 1080 ---PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY--ICRATNK 1134
P S+ + + + T + F + V A D G C
Sbjct: 214 GLFPVSEAQVH--LALGDQRL---NPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILG 268
Query: 1135 WGTAMTKAKVICKAKHDIVTESQLP 1159
+ T V + P
Sbjct: 269 NQSQETLQTVTIYSFPAPNVILTKP 293
Score = 56.4 bits (135), Expect = 6e-08
Identities = 55/426 (12%), Positives = 102/426 (23%), Gaps = 93/426 (21%)
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
L G + + L +E K + + E+S V ++
Sbjct: 11 LPRGGSVLVTCSTSCDQPMLLGIETPLPKKELLLPGN-------NRKVYELSNV--QEDS 61
Query: 779 QYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQY--- 835
Q C + G++ + V + + LP V G+
Sbjct: 62 QPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPV---------------GKNLTL 106
Query: 836 SCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKI 895
C+ A + + +G++ + E + + E T + + +G RT +
Sbjct: 107 RCQVEGGAPRANLTVVLL-RGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDL 165
Query: 896 AELEGYGHEREDRIEEDLGKAPEFLTT--PTDLTLAESTLAHFECRLTPTN-DPSMTVEW 952
E + + L T C L V
Sbjct: 166 RPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHL 225
Query: 953 FHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLY--TCKATNKHGEATTSCKLTVKG 1010
+ L+ T + F V D G TC + T +T+
Sbjct: 226 ALGDQRLN---PTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY- 281
Query: 1011 RQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAG 1070
P P V + +V E
Sbjct: 282 --------------------------------------SFPAPNVILT----KPEVSEGT 299
Query: 1071 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 1130
+V C P+ + ++ G R L + + + C
Sbjct: 300 EVTVKCEAHPR--AKVTLNGVPAQPL---GPRA---------QLLLKATPEDNGRSFSCS 345
Query: 1131 ATNKWG 1136
AT +
Sbjct: 346 ATLEVA 351
Score = 50.3 bits (119), Expect = 5e-06
Identities = 22/200 (11%), Positives = 45/200 (22%), Gaps = 74/200 (37%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
E + + G R L + + D+ ++C AT +
Sbjct: 306 EAHPRAKVTLNGVPAQPL---GPR---------AQLLLKATPEDNGRSFSCSATLEVAGQ 353
Query: 62 VSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECK 121
+ E + L P+ +D P +
Sbjct: 354 LIHKNQTRE-----------------LRVLYGPRLDERDCPG-------------NWTWP 383
Query: 122 ENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 181
EN C+ +P +++ +G
Sbjct: 384 ENSQQTPMCQAW-------------------GNPLPELKCLKDGTFPLP----------- 413
Query: 182 FVVMDIAYVQSHDSGEYVCQ 201
+ + V G Y+C+
Sbjct: 414 --IGESVTVTRDLEGTYLCR 431
Score = 47.6 bits (112), Expect = 3e-05
Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 13/67 (19%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P +++ K+G L ++ D Y C+A + GE
Sbjct: 395 WGNPLPELKCLKDGTFP-------------LPIGESVTVTRDLEGTYLCRARSTQGEVTR 441
Query: 64 TCTLKIE 70
T+ +
Sbjct: 442 EVTVNVL 448
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A
{Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Length = 154
Score = 104 bits (260), Expect = 8e-26
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 7/150 (4%)
Query: 1705 EDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDA 1764
S + I N+ V EEK V P F TI + G ARFD
Sbjct: 10 SGSSPTSPINANKVENEDAFLEEVAEEKPH------VKPYFTKTILDMEVVEGSAARFDC 63
Query: 1765 KISATKPLDVYWLKNGKKIIPDIRYK-TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGE 1823
K+ +V W K+ + ++ +E+ +L I E +D Y C A+N+ GE
Sbjct: 64 KVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGE 123
Query: 1824 ARCEAELVVQSKKAPGKQAPAPGAAVAQDE 1853
A C AEL+V++ G+ ++E
Sbjct: 124 ATCTAELLVETMGKEGEGEGEGEEDEEEEE 153
Score = 104 bits (260), Expect = 9e-26
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 906 EDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRI 965
E+ EE P F T D+ + E + A F+C++ P V WF + +
Sbjct: 31 EEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEG--YPDPEVMWFKDDNPVKESRHF 88
Query: 966 K-TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
+ ++ G L I++V D YTCKA N GEAT + +L V+
Sbjct: 89 QIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETM 135
Score = 102 bits (255), Expect = 4e-25
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI-HT 1690
A EKP P FTK I E ARF+ + +G P P + WF++D P+ S FQI +
Sbjct: 34 AEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYD 93
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRG 1738
L + +V +D + A N G+A C+A L+VE + G G
Sbjct: 94 EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKEGEG 141
Score = 93.4 bits (232), Expect = 5e-22
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 696 TETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR 755
E A+ + P FT + +++ + EG A F+ ++ P +V WF + P+K
Sbjct: 31 EEVAEEKPHVKPYFTKTILDME-VVEGSAARFDCKVEG--YPDPEVMWFKDDNPVKESRH 87
Query: 756 FR-TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
F+ + + G L IS V +D +Y+C+A N GEA +A + V+
Sbjct: 88 FQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKE 138
Score = 79.1 bits (195), Expect = 5e-17
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 373 TKIEDTGVYTCRATNKWGQAEISVNLEC-VDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
+ + +G N LE ++ P FT I +E + +G +A F+C
Sbjct: 5 SGRKASGSSPTSPINANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVV-EGSAARFDC 63
Query: 432 TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVCRAWN 488
+ P+ +V WF + P+ ++ D G + I+ V D +Y C+A N
Sbjct: 64 KVEG--YPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVN 119
Score = 78.0 bits (192), Expect = 1e-16
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 1043 ELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR 1102
E + +E+ P FT + D ++V E FDC++E P + WF + P
Sbjct: 31 EEVAEEKPHVKPYFTKTILD-MEVVEGSAARFDCKVE--GYPDPEVMWFKDDNPVKESRH 87
Query: 1103 VKTVYD-FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
+ YD G SL + V D +Y C+A N G A A+++ + E +
Sbjct: 88 FQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMG---KEGEGEGE 144
Query: 1162 MSAEKLKELE 1171
++ +E E
Sbjct: 145 GEEDEEEEEE 154
Score = 77.6 bits (191), Expect = 2e-16
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFD-FGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P+ ++ WFK+ P+ + +D G +L+I+ + DD A YTCKA N LGEA
Sbjct: 66 EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEAT 125
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKE 96
T L +E ED E+ +E
Sbjct: 126 CTAELLVETM-----GKEGEGEGEGEEDEEEEEE 154
Score = 74.9 bits (184), Expect = 1e-15
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
E + P F I + +VE + +F+C++ G P+ +V WF + P+ F
Sbjct: 35 EEKPHVKPYFTKTILDME-VVEGSAARFDCKV--EGYPDPEVMWFKDDNPVKESRHFQID 91
Query: 1478 YD-FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
YD G ++ V +D +Y C+A N G A L
Sbjct: 92 YDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVETMG 136
Score = 71.0 bits (174), Expect = 3e-14
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 11/150 (7%)
Query: 273 EDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEA 330
+ SG N+ L+ + H P F+ + + ++ EG A F+
Sbjct: 8 KASGSSPTSPINANKVENEDAFLEEVAEEKP-HVKPYFT---KTILDMEVVEGSAARFDC 63
Query: 331 SLIPVGDQTMTVEFLYNGKPIEASHRIR-TVHAFGMVVLEILGTKIEDTGVYTCRATNKW 389
+ G V + + P++ S + G L I +D YTC+A N
Sbjct: 64 KV--EGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSL 121
Query: 390 GQAEISVNLECVDKSKGQPPKFTSHIKSLE 419
G+A + L ++ G+ + + E
Sbjct: 122 GEATCTAELLV--ETMGKEGEGEGEGEEDE 149
Score = 68.3 bits (167), Expect = 3e-13
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 20/110 (18%)
Query: 92 EKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTP 151
+ + + E P F + D+E E FDC+VE G
Sbjct: 25 NEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVE---------G-------- 67
Query: 152 VNDPELKVEWFHNGKPIFHKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVC 200
P+ +V WF + P+ ++ D G + I+ V D +Y C
Sbjct: 68 --YPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTC 115
Score = 66.4 bits (162), Expect = 1e-12
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD-FGFISLDMDYVYA 571
+++V E FDC++E P + WF + P + YD G SL + V
Sbjct: 50 DMEVVEGSAARFDCKVE--GYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCG 107
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKVL 599
D +Y C+A N G A A+++ + +
Sbjct: 108 DDDAKYTCKAVNSLGEATCTAELLVETM 135
Score = 65.6 bits (160), Expect = 2e-12
Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 48/156 (30%)
Query: 1239 SAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-- 1292
S ++E E +E P P F I + V E RF+ +V +P V
Sbjct: 16 SPINANKVENEDAFLEEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMW 75
Query: 1293 ---------DPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDI 1343
+++ + G SL I
Sbjct: 76 FKDDNPVKESRHFQIDYD---------------------------------EEGNCSLTI 102
Query: 1344 DYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
V +D +Y C+A N GEA A + + +
Sbjct: 103 SEVCGDDDAKYTCKAVNSLGEATCTAELLVETMGKE 138
Score = 61.8 bits (150), Expect = 6e-11
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
+ V +EKP P F +V EG ARF +V GYP P VMW + + +
Sbjct: 31 EEVAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKES 85
Score = 60.3 bits (146), Expect = 2e-10
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 240 EWFVNNKPLPAGAKFKTTHD-FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
WF ++ P+ F+ +D G +L I +D YT KA NS G AT + L
Sbjct: 74 MWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELL 131
Score = 60.3 bits (146), Expect = 2e-10
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 603 VEWFYNGKKLPHGHRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V WF + + ++ + + G L I ++ Y C+A N G A L
Sbjct: 73 VMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELL 131
Score = 49.9 bits (119), Expect = 7e-07
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 13/77 (16%)
Query: 1807 VEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNV 1866
+ SG+ +N +A L +++ P P + + D V
Sbjct: 7 RKASGSSPTSPINANKVENEDAFLEEVAEEKPH-------------VKPYFTKTILDMEV 53
Query: 1867 KEGSAVTLKCRITGKPR 1883
EGSA C++ G P
Sbjct: 54 VEGSAARFDCKVEGYPD 70
Score = 49.1 bits (117), Expect = 1e-06
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELE 881
IS V +D +Y+C+A N GEA +A + V+ + + EG D+ E E
Sbjct: 101 TISEVCGDDDAKYTCKAVNSLGEATCTAELLVET-----MGKEGEGEGEGEEDEEEEEE 154
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody,
immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S
3cm9_S 3chn_J 3cm9_J
Length = 585
Score = 113 bits (283), Expect = 1e-25
Identities = 72/493 (14%), Positives = 127/493 (25%), Gaps = 73/493 (14%)
Query: 357 IRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIK 416
+ G V+ I +D+G Y C V+LE Q P + K
Sbjct: 66 LTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVS-----QGPGLLNDTK 120
Query: 417 SLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIF------------HKNRVKMVSD- 463
+ C N + K + G + R+++
Sbjct: 121 VYTVDLGR-TVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQG 179
Query: 464 ---FGFVVMDIAYVQSHDSGEYVCRAWN---------NFIFIPPFPIFIFHQIRLPSPSQ 511
F V+ I ++ D+G+Y+C+A + + + P P ++ +R
Sbjct: 180 TGQLLFSVV-INQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFH 238
Query: 512 DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF---GFISLDMDY 568
L A F CR S + G+ + G S+ +
Sbjct: 239 CALGPEVANVAKFLCR--QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITG 296
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVI 628
+ D+G Y+C A + ++ + G +
Sbjct: 297 LRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSV------- 349
Query: 629 LDILYC----YEENSGVYECRATNKYGSDV-----TKASLKCVSKTNL-ILESQLPEGME 678
+ C E S Y C ++ +K + L +LE
Sbjct: 350 --AVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFT 407
Query: 679 GGLEKIQTLED-------AAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARL 731
L ++ T D T + + GE
Sbjct: 408 VILNQL-TSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHF 466
Query: 732 TP--TDDPKLKVEWFWNGKPMKTGSRFRTFCDF-------GFVILEISPVYPEDCGQYSC 782
+ K +W G F V L ++ V D G Y C
Sbjct: 467 PCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWC 526
Query: 783 RAYNDYGEAVTSA 795
+ T+A
Sbjct: 527 GVKQGHFYGETAA 539
Score = 109 bits (272), Expect = 2e-24
Identities = 78/538 (14%), Positives = 132/538 (24%), Gaps = 69/538 (12%)
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
+V E +V C P+ K C + + R +
Sbjct: 9 EVNSVEGNSVSITCYYPPTS-VNRHTRKYWCRQGARGGCITLISS-EGYVSSKYAGRANL 66
Query: 177 VSD--FGFVVMDIAYVQSHDSGEYVCQ--------WFVNNKPLPAGAKFKTTHDFGYVAL 226
+ G V++IA + DSG Y C F + + G V L
Sbjct: 67 TNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDL 126
Query: 227 DIELMLKTLV-----PFTEWFVNNKPLPAGAKFKTTH-----------------DFGYVA 264
+ + + L ++ +
Sbjct: 127 GRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFS 186
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPL-FSLQFQHLSNLSEG 323
+ I D+G Y +A + S + L+ L+ L S+ F
Sbjct: 187 VVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVA 246
Query: 324 EIAHFEASLIPVGDQTMTVEFLYNGKPIEAS---HRIRTVHAFGMVVLEILGTKIEDTGV 380
+A F + V GK A + G + I G + ED G
Sbjct: 247 NVAKFLCR--QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGR 304
Query: 381 YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE 440
Y C A + E S ++ G S C
Sbjct: 305 YLCGAHSDGQLQEGSPIQAWQLFV--NEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKS 362
Query: 441 LK-------VEWFHNGKPIFHKNRVKMVSDFGFVVMD----------IAYVQSHDSGEYV 483
+K + + + VK + +++ + + S D+G Y
Sbjct: 363 IKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYW 422
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMR--IDWF 541
C + ++ I I N+ + C K + W
Sbjct: 423 CLTNGDTLWRTTVEIKIIEGEPNLKVPG-NVTAVLGETLKVPCHFPCKFSSYEKYWCKWN 481
Query: 542 FNGRPFATGSRVKTVYDF-------GFISLDMDYVYARDSGEYICRATNKWGTAMTKA 592
G F +SL ++ V D G Y C T A
Sbjct: 482 NTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAA 539
Score = 106 bits (265), Expect = 2e-23
Identities = 59/481 (12%), Positives = 127/481 (26%), Gaps = 92/481 (19%)
Query: 258 HDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHL 317
+ G ++I +DSG Y + + +L+ + + ++ ++++
Sbjct: 70 PENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTV----- 124
Query: 318 SNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI------------EASHRIRTV---HA 362
G Q + G + RIR
Sbjct: 125 ---DLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTG 181
Query: 363 FGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQ---PPKFTSHIKSLE 419
+ + I ++ D G Y C+A + + + +L+ + + +
Sbjct: 182 QLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCAL 241
Query: 420 GLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD--FGFVVMDIAYVQSH 477
G + + A F C + + ++ V + + R+ + G + I ++
Sbjct: 242 GPEVANVAKFLCRQSSGENCDVVV-NTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKE 300
Query: 478 DSGEYVCRAWNNFIFIPPFPIFIFHQIRLP----SPSQDNLDVPEAGKVHFDCRLEPKSD 533
D+G Y+C A ++ PI + S + V C
Sbjct: 301 DAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYN--RK 358
Query: 534 PTMRIDWFFNGRPFATGSRVKTVY-------------------DFGFISLDMDYVYARDS 574
+ I ++ G V G ++ ++ + +RD+
Sbjct: 359 ESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDA 418
Query: 575 GEYICRATNKWGTAMTKAKVICKVLTVIVE------------------------------ 604
G Y C T I + +
Sbjct: 419 GFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWC 478
Query: 605 -WFYNGKKL-------PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
W G + P + +V L + + G Y C + T
Sbjct: 479 KWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETA 538
Query: 657 A 657
A
Sbjct: 539 A 539
Score = 97.0 bits (240), Expect = 2e-20
Identities = 49/373 (13%), Positives = 95/373 (25%), Gaps = 71/373 (19%)
Query: 1566 VSQPEAQKVQEGEPARF-CT--RVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHK 1622
+ PE EG C + R W G + +++ +
Sbjct: 4 IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGR 63
Query: 1623 GKI--------------------------------QERVVDASEKPAKPPVFTKKIQPCR 1650
+ + D S + ++ P +
Sbjct: 64 ANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYT 123
Query: 1651 AFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI-----------------HTFST 1693
F + K + + T
Sbjct: 124 VDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQL 183
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV 1753
+++ Q+ + D+G + A + K +A+L V + + S +T +
Sbjct: 184 LFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGS-VTFHCALG 242
Query: 1754 INVGQLARFDAKISATKPLDVYWLKNGKKIIPD---IRYKTLEEDNLFTLLIIEAVVEDS 1810
V +A+F + S+ + DV GK+ I ++D F+++I ED+
Sbjct: 243 PEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA 302
Query: 1811 GAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGS 1870
G Y C A ++ Q P GS
Sbjct: 303 GRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIP---------------RSPTVVKGVAGS 347
Query: 1871 AVTLKCRITGKPR 1883
+V + C K
Sbjct: 348 SVAVLCPYNRKES 360
Score = 92.0 bits (227), Expect = 6e-19
Identities = 78/632 (12%), Positives = 141/632 (22%), Gaps = 143/632 (22%)
Query: 424 GDSAHFECTLTPVN-DPELKVEWFHNGKPIF--------------HKNRVKMVSD--FGF 466
G+S C P + + + W G + R + + G
Sbjct: 15 GNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGT 74
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
V++IA + DSG Y C N + Q V V +C
Sbjct: 75 FVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINC 134
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
+ ++ + + +
Sbjct: 135 PFKTENAQKR---------------------------------------KSLYKQIGL-- 153
Query: 587 TAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYR---TFHDFGIVILDILYCYEENSGVYE 643
V+V + R R + + I ++G Y
Sbjct: 154 ------------YPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYL 201
Query: 644 CRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEH 703
C+A + S+ A L+ + E +L G
Sbjct: 202 CQAGDDSNSNKKNADLQVLKP-----EPELVYEDLRG----------------------- 233
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPM-KTGSRF--RTFC 760
+V A F R + V GK R
Sbjct: 234 ------SVTFHCALGPEVANVAKFLCR--QSSGENCDVVVNTLGKRAPAFEGRILLNPQD 285
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFIS 820
G + I+ + ED G+Y C A++D S Q
Sbjct: 286 KDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQ---------LFVNEESTIPR 336
Query: 821 FHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAEL 880
+ C +++ +G ++ + L
Sbjct: 337 SPTVVKGVAGSSVAVLCPYNRKESKSIKYWC-LWEGAQNGRCPLLVDSEGWVKAQYEGRL 395
Query: 881 EGYGHEREDRTIDKIAELE-----------GYGHEREDRIEEDLGKAPEFLTTPTDLTLA 929
+ +L +E + + L P ++T
Sbjct: 396 SLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAV 455
Query: 930 ESTLAHFECRLTP--TNDPSMTVEWFHNGKALSAGSR-------IKTINDFGFVILEIND 980
C ++ +W + G + + V L +N
Sbjct: 456 LGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNL 515
Query: 981 VYLRDSGLYTCKATNKH-GEATTSCKLTVKGR 1011
V D G Y C H T + + V+ R
Sbjct: 516 VTRADEGWYWCGVKQGHFYGETAAVYVAVEER 547
Score = 90.8 bits (224), Expect = 1e-18
Identities = 76/681 (11%), Positives = 156/681 (22%), Gaps = 172/681 (25%)
Query: 1272 ESVTVQEAEPVRFETRVEPRVDPRLRVE--CSLSTAFFFPFINISTAFLIFNFCLHAVIF 1329
E V E V P R + C + S ++ + A +
Sbjct: 8 EEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLT 67
Query: 1330 SHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGM 1389
+ P + G ++I + +D G Y C + ++ + P +
Sbjct: 68 NFP--ENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLL--------- 116
Query: 1390 LKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQL 1449
+ T + ++ C
Sbjct: 117 ---------------------------------NDTKVYT-------VDLGRTVTINCPF 136
Query: 1450 APVGDPNMKVEWFLNGKPLP------------HKNRF-----NPIYDFGYVAMNFGWVYP 1492
K + G + R V +N +
Sbjct: 137 KTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQ--LRL 194
Query: 1493 EDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQ 1552
D+G+YLC+A + ++ A L+ + L
Sbjct: 195 SDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGS-------------------- 234
Query: 1553 LVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVR--- 1609
V+ A + A+F R + V+ G R
Sbjct: 235 -------------VTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILL 281
Query: 1610 -----------KITATETT---------EMEHKGKIQERVVDASEKPAKPPVFTKKIQPC 1649
IT + + + + + +
Sbjct: 282 NPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVV 341
Query: 1650 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI-------------------HT 1690
+ ++ +IK++ + +
Sbjct: 342 KGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEP 401
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
+ +I+ Q+ D+G + + K G + P +T +
Sbjct: 402 GNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVE-----IKIIEGEPNLKVPGNVTAVL 456
Query: 1751 SAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYK-------TLEEDNLFTLLII 1803
+ F K S+ + W G + +P E L +L +
Sbjct: 457 GE--TLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLN 514
Query: 1804 EAVVEDSGAYECVAMNN-AGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLK 1862
D G Y C + V+ +KA G +D + A+
Sbjct: 515 LVTRADEGWYWCGVKQGHFYGETAAVYVAVEERKAAGS----------RDVSLAKADAAP 564
Query: 1863 DQNVKEGSAVTLKCRITGKPR 1883
D+ V + ++ + PR
Sbjct: 565 DEKVLDSGFREIENKAIQDPR 585
Score = 83.5 bits (205), Expect = 3e-16
Identities = 68/563 (12%), Positives = 122/563 (21%), Gaps = 137/563 (24%)
Query: 1247 EKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAF 1306
N + + P + + + TV V + + + +
Sbjct: 95 GINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLY 154
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
I+ S+ ++ N+ + L F S+ I+ + D G+Y+C+A +D
Sbjct: 155 PVLVID-SSGYVNPNYTGRIRLDIQGTGQLLF-SVVINQLRLSDAGQYLCQAGDDSNSNK 212
Query: 1367 TKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPR 1426
A + K + + +T PE
Sbjct: 213 KNADLQVLKPEPELVYEDLRGS----------------------VTFHCALGPEVA---- 246
Query: 1427 FVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN-----RFNPIYDFG 1481
KF C+ + N V GK P
Sbjct: 247 --------------NVAKFLCRQS--SGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSF 290
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
V + + ED+G YLC A +
Sbjct: 291 SVVITG--LRKEDAGRYLCGAHSDGQ---------------------------------- 314
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLING 1600
Q E P K G C + +
Sbjct: 315 ----LQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLC-PYNRKESKSIKYWCLW 369
Query: 1601 HTIVNEIVRKITATETTEMEHKG----------------KIQE-RVVDA----------S 1633
N + +E + + DA +
Sbjct: 370 EGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDT 429
Query: 1634 EKPAKPPVFTKKIQPCRAFEQD-----------QARFEVEFDGDPLPTIKWFREDFPITS 1682
+ + +P + F +F KW
Sbjct: 430 LWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALP 489
Query: 1683 SPD-------FQIHTFSTKSILIMRQVFMEDSGVFA-VIAENRGGKAKCSANLVVEEKRQ 1734
S D S L + V D G + + + + + VEE++
Sbjct: 490 SQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERKA 549
Query: 1735 GGRGGVVPPSFLTTISSAVINVG 1757
G V V++ G
Sbjct: 550 AGSRDVSLAKADAAPDEKVLDSG 572
Score = 82.4 bits (202), Expect = 7e-16
Identities = 66/558 (11%), Positives = 132/558 (23%), Gaps = 103/558 (18%)
Query: 902 GHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGK---- 957
+ ++ + P L T+ C N + G
Sbjct: 98 SRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL 157
Query: 958 --------ALSAGSRIKTINDF---GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKL 1006
+ RI+ + IN + L D+G Y C+A + + L
Sbjct: 158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADL 217
Query: 1007 TVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDV 1066
V E + L
Sbjct: 218 QVLKP----------------------------------EPELVYEDLRGSVTFHCALGP 243
Query: 1067 PEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF---GFISLDMDYVYARD 1123
A F CR S + G+ + G S+ + + D
Sbjct: 244 EVANVAKFLCR--QSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKED 301
Query: 1124 SGEYICRATNKWGTAMTKAKVICKAK-HDIVTESQLPDSMSAEKLK--ELEKNYTPEEIE 1180
+G Y+C A + + ++ T + P + + Y +
Sbjct: 302 AGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRK--- 358
Query: 1181 EDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEKHDIVTESQLPDSMSA 1240
+ + + L + + + ++ + P + +
Sbjct: 359 --------ESKSIKYWCLWEGAQNGRCPLLVD----SEGWVKAQYEGRLSLLEEPGNGTF 406
Query: 1241 E-KLKELE-----------KNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRV 1288
L +L T + E + +VT E ++
Sbjct: 407 TVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHF 466
Query: 1289 EPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYP 1348
+ + C + N L + F + + VSL ++ V
Sbjct: 467 PCKFSSYEKYWCKWN--------NTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTR 518
Query: 1349 EDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSE 1408
D+G Y C H T A + + V + + + A +
Sbjct: 519 ADEGWYWCGVKQGHFYGETAA---------VYV--AVEERKAAGSRDVSLAKADAAPDEK 567
Query: 1409 IYLTEDDLYEPEKKQPPR 1426
+ + E + Q PR
Sbjct: 568 VLDSGFREIENKAIQDPR 585
Score = 81.2 bits (199), Expect = 2e-15
Identities = 68/614 (11%), Positives = 139/614 (22%), Gaps = 143/614 (23%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGS----------------RIRSTFDFGLVTLSINSLRAD 45
+ + + W + G + + + + G ++I L D
Sbjct: 26 PTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85
Query: 46 DSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELV 105
DS Y C +L++
Sbjct: 86 DSGRYKCGLGINSRGLSFDVSLEV------------------------------------ 109
Query: 106 FDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKI-----GKLLCTLTPVNDPELKVE 160
P ++ V +C + K G + +
Sbjct: 110 SQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPN- 168
Query: 161 WFHNGKPIFHKNRVKMVSD----FGFVVMDIAYVQSHDSGEYVC---------QWFVNNK 207
+ R+++ F V+ I ++ D+G+Y+C + + +
Sbjct: 169 ---------YTGRIRLDIQGTGQLLFSVV-INQLRLSDAGQYLCQAGDDSNSNKKNADLQ 218
Query: 208 PLPAGAKFKTTHDFGYVALDIEL-------------MLKTLVPFTEWFVNNKPLPAG--- 251
L + G V L K PA
Sbjct: 219 VLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGR 278
Query: 252 AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFS 311
G ++ I G ED+G Y A + S + P
Sbjct: 279 ILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIP--- 335
Query: 312 LQFQHLSNLSEGEIAHFE----------------------ASLIPVGDQTMTVEFLYNGK 349
+ + G + D V+ Y G+
Sbjct: 336 -RSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGR 394
Query: 350 PIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
+ G + + D G Y C + + P
Sbjct: 395 -----LSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVP 449
Query: 410 KFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHK-----NRVKMVSDF 464
++ ++ G HF C + K W + G ++ + D
Sbjct: 450 ---GNVTAVLGETLKVPCHFPCKFSSYEKYWCK--WNNTGCQALPSQDEGPSKAFVNCDE 504
Query: 465 G---FVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGK 521
+ + V D G Y C + +++ + R + ++ + +A
Sbjct: 505 NSRLVSLT-LNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEER-KAAGSRDVSLAKADA 562
Query: 522 VHFDCRLEPKSDPT 535
+ L+
Sbjct: 563 APDEKVLDSGFREI 576
Score = 78.1 bits (191), Expect = 2e-14
Identities = 74/630 (11%), Positives = 155/630 (24%), Gaps = 120/630 (19%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTN-DPSMTVEWFHNGKALSAGSRIKT------ 967
K+P + P ++ E C PT+ + W G + I +
Sbjct: 1 KSP--IFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSS 58
Query: 968 -------INDF---GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVE 1017
+ +F G ++ I + DSG Y C + L V G+ +
Sbjct: 59 KYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND 118
Query: 1018 PQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCR 1077
+V + T I P + + + Q L
Sbjct: 119 TKVYTVDLGRTVTIN------------CPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVN 166
Query: 1078 LEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 1137
+ I TG + +V ++ + D+G+Y+C+A + +
Sbjct: 167 PNYTGRIRLDIQG--------TGQLLFSVV--------INQLRLSDAGQYLCQAGDDSNS 210
Query: 1138 AMTKAKVICKAKHDIVTESQLPDSMSAE-KLKELEKNYTPEEIEEDEIPEEPPRLNQSRY 1196
A + + L S++ L N + +
Sbjct: 211 NKKNADLQVLKPEPELVYEDLRGSVTFHCALGPEVANVAKFLCRQ----SSGENCDVVVN 266
Query: 1197 KKQNQSAWYDSELSEYQKERANEST----ELEKHD------IVTESQLPDSMSAEKLKEL 1246
++ ++ + +++ + L K D S + +
Sbjct: 267 TLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQ- 325
Query: 1247 EKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAF 1306
E V V + ++ C A
Sbjct: 326 ------------LFVNEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQ 373
Query: 1307 FFPFINI--STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
+ S ++ + + P G ++ ++ + D G Y C D
Sbjct: 374 NGRCPLLVDSEGWVKAQYEGRLSLLEEP--GNGTFTVILNQLTSRDAGFYWCLTNGDTLW 431
Query: 1365 AFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQP 1424
T + P +++ V +L + + +
Sbjct: 432 RTTVEIKIIEGEPNLKVPGNVT-AVLGETLKVPCH-----------------FPCKFSSY 473
Query: 1425 PRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVA 1484
K+ C+ + + + P + +
Sbjct: 474 E------------------KYWCK---WNNTGCQALPSQDEGPSKAFVNCDENSRLVSLT 512
Query: 1485 MNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
+N V D G Y C + ET A+
Sbjct: 513 LNL--VTRADEGWYWCGVKQGHFYGETAAV 540
Score = 77.3 bits (189), Expect = 2e-14
Identities = 77/566 (13%), Positives = 150/566 (26%), Gaps = 117/566 (20%)
Query: 611 KLPHGHRY--RTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLI 668
+ R F + G +++I +++SG Y+C SL+ L+
Sbjct: 57 SSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLL 116
Query: 669 LESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFE 728
++++ G I + ++ + ++Q ++ V + + +
Sbjct: 117 NDTKVYTVDLGRTVTINCPFKTENAQKRK---SLYKQIGLYPVLVIDSSGYVNPN---YT 170
Query: 729 ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDY 788
R+ G+ F + I+ + D GQY C+A +D
Sbjct: 171 GRIRLDIQ----------------GTGQLLF------SVVINQLRLSDAGQYLCQAGDDS 208
Query: 789 GEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVT 848
+A ++V ++ L ++FH + ++ CR + V
Sbjct: 209 NSNKKNADLQVLKPEPELVYEDLRGS----VTFHCALGPEVANVAKFLCRQSSGENCDVV 264
Query: 849 ----SASMKVQGKRSIILESQLPKGMEGTIDKIAEL-EG-Y--GHEREDRTIDKIAELEG 900
R ++ I + + G Y G + + +
Sbjct: 265 VNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAW 324
Query: 901 YGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALS 960
E+ +PT + + C S+ G
Sbjct: 325 QLFVNEEST---------IPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNG 375
Query: 961 AGSRIKTINDF-----------------GFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ + G + +N + RD+G Y C TT
Sbjct: 376 RCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTV 435
Query: 1004 CKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDN 1063
++G + V V+A+ L +
Sbjct: 436 EIKIIEGEPNLKVPGNVTAV------------------------------------LGET 459
Query: 1064 LDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF-------GFISLDM 1116
L VP HF C+ + W G F +SL +
Sbjct: 460 LKVP----CHFPCKFSSYEKYWCK--WNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTL 513
Query: 1117 DYVYARDSGEYICRATNKWGTAMTKA 1142
+ V D G Y C T A
Sbjct: 514 NLVTRADEGWYWCGVKQGHFYGETAA 539
Score = 75.8 bits (185), Expect = 7e-14
Identities = 56/492 (11%), Positives = 120/492 (24%), Gaps = 103/492 (20%)
Query: 720 REGENAHFEARLTPT-DDPKLKVEWFWNGKPMKTGSRFRT----------------FCDF 762
EG + PT + + W G + + F +
Sbjct: 13 VEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPEN 72
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVF-ISF 821
G ++ I+ + +D G+Y C + S++V ++ ++++ ++
Sbjct: 73 GTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTI 132
Query: 822 HEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ----GKRSIILESQLPKGMEGTIDKI 877
+ + + Y V +S V G+ + ++ I+++
Sbjct: 133 NCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQL 192
Query: 878 AELEGYGHERED--------RTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLA 929
D + + E +T L
Sbjct: 193 --------RLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYEDLRGSVTFHCALGPE 244
Query: 930 ESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF---GFVILEINDVYLRDS 986
+ +A F CR + + V GK A +N G + I + D+
Sbjct: 245 VANVAKFLCRQSS--GENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDA 302
Query: 987 GLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIP 1046
G Y C A + S +
Sbjct: 303 GRYLCGAHSDGQLQEGSPIQAWQ------------------------------------- 325
Query: 1047 DEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 1106
N + + V C + I ++ G V
Sbjct: 326 --LFVNEESTIPRSPTVVKGVAGSSVAVLCPYN--RKESKSIKYWCLWEGAQNGRCPLLV 381
Query: 1107 Y-------------------DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICK 1147
G ++ ++ + +RD+G Y C T I +
Sbjct: 382 DSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIE 441
Query: 1148 AKHDIVTESQLP 1159
+ ++ +
Sbjct: 442 GEPNLKVPGNVT 453
Score = 74.3 bits (181), Expect = 2e-13
Identities = 62/498 (12%), Positives = 113/498 (22%), Gaps = 125/498 (25%)
Query: 1 VEPRADPNLKIEWFKNGVPLSL------------GSRIRSTFDF---GLVTLSINSLRAD 45
+ K + + G+ L RIR L ++ IN LR
Sbjct: 136 FKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLS 195
Query: 46 DSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELV 105
D+ Y C+A + L++ L
Sbjct: 196 DAGQYLCQAGDDSNSNKKNADLQVLKPEPELVYE-------------------------- 229
Query: 106 FDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
+V F C + P K LC + + ++ V
Sbjct: 230 ---------------DLRGSVTFHCALGPEVANV---AKFLCRQSSGENCDVVV-NTLGK 270
Query: 166 KPIFHKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGY 223
+ + R+ + G + I ++ D+G Y+C ++
Sbjct: 271 RAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCG--AHSDGQLQEGSPIQAWQLFV 328
Query: 224 VALDIELMLKTLVPFTE--------------------WFVNNKPLPAGAKFKTTHD---- 259
T+V W + +
Sbjct: 329 NEESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVK 388
Query: 260 --------------FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNH 305
G + + + D+G Y TT + +
Sbjct: 389 AQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTT-------VEIKIIE 441
Query: 306 NYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHR-------IR 358
P + + L E + ++ G S +
Sbjct: 442 GEPNLKVPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPSQDEGPSKAFVN 501
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE-ISVNLECVDKSKGQPPKFTSHIKS 417
+V L + D G Y C E +V + V++ K + S
Sbjct: 502 CDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVA-VEERKAAGSRDVS---- 556
Query: 418 LEGLKDGDSAHFECTLTP 435
L D+A E L
Sbjct: 557 ---LAKADAAPDEKVLDS 571
Score = 61.9 bits (149), Expect = 2e-09
Identities = 58/516 (11%), Positives = 122/516 (23%), Gaps = 119/516 (23%)
Query: 1063 NLDVPEAGKVHFDCRLEPKS-DPTMRIDWFFNGRPFATGSRVKT-------------VYD 1108
++ E V C P S + R W G + + + + +
Sbjct: 9 EVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTN 68
Query: 1109 F---GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAE 1165
F G +++ + DSG Y C + ++ + + +
Sbjct: 69 FPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLND---TKVYTVD 125
Query: 1166 KLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEK 1225
+ + N E + +S YK+ + S Y L+
Sbjct: 126 LGRTVTIN--------CPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPNYTGRIRLDI 177
Query: 1226 HDIVTESQLPDSMSAEKLKELE-KNYTPE-----------EIEEDEIPEEPPRFITEIES 1273
+ + L + + ++ + E E
Sbjct: 178 QG-----------TGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPEL 226
Query: 1274 VTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPI 1333
V V F + P V + C S+ + + F ++
Sbjct: 227 VYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQD- 285
Query: 1334 FDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTE 1393
G S+ I + ED G Y+C A++D + +
Sbjct: 286 -KDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFV---------------- 328
Query: 1394 ALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVG 1453
+ + T + V S C
Sbjct: 329 -----------------------------NEESTIPRSPTVVKGVAGSSVAVLCPYN--R 357
Query: 1454 DPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW-------------------VYPED 1494
+ ++++ + + + G+V + + D
Sbjct: 358 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 417
Query: 1495 SGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLP 1530
+G Y C T I G+P + +
Sbjct: 418 AGFYWCLTNGDTLWRTTVEIKIIEGEPNLKVPGNVT 453
Score = 55.4 bits (132), Expect = 1e-07
Identities = 35/282 (12%), Positives = 78/282 (27%), Gaps = 58/282 (20%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFE---VEFDGDPLPTIKWFRE-----DFPITSSPDFQIH 1689
K P+F + + E + + W R+ + SS +
Sbjct: 1 KSPIFGPEEV--NSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSS 58
Query: 1690 TFSTKS-----------ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRG 1738
++ ++ ++ + Q+ +DSG + +L V +
Sbjct: 59 KYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQ------- 111
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKK---IIPDIRYKTLEE 1794
P L +++G+ + K ++ D
Sbjct: 112 ---GPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGYVNPN 168
Query: 1795 DN-------------LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQ 1841
LF+++I + + D+G Y C A +++ + A+L V +
Sbjct: 169 YTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPEPELVY 228
Query: 1842 APAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
G+ T L + + CR +
Sbjct: 229 EDLRGSV-------TFHCALG---PEVANVAKFLCRQSSGEN 260
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling
protein/receptor, growth regulation/complex, vitamin
K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Length = 195
Score = 103 bits (257), Expect = 7e-25
Identities = 24/209 (11%), Positives = 56/209 (26%), Gaps = 31/209 (14%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFE--VEFDGDPLPTIKWFREDFPITSSPDFQIHT----- 1690
+ F ++ G+P P + W R+ + + Q
Sbjct: 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEP-PEVHWLRDGQILELADSTQTQVPLGED 59
Query: 1691 ----FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSF 1745
+ S L + + + D+G + + + +E P F
Sbjct: 60 EQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE----------GLPYF 109
Query: 1746 LTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIE 1804
L + + +P+D+ WL++ + +L +
Sbjct: 110 LEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPG-----HGPQRSLHVPG 164
Query: 1805 AVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ + ++ C A N G +
Sbjct: 165 --LNKTSSFSCEAHNAKGVTTSRTATITV 191
Score = 96.1 bits (239), Expect = 2e-22
Identities = 37/236 (15%), Positives = 64/236 (27%), Gaps = 62/236 (26%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV-- 974
F+ P ++T A C+L +P V W +G+ L +T G
Sbjct: 3 SPFVGNPGNITGARGLTGTLRCQLQVQGEP-PEVHWLRDGQILELADSTQTQVPLGEDEQ 61
Query: 975 -------ILEINDVYLRDSGLYTCKATNKHGEATT-SCKLTVKGRQGIDVEPQVSAIFAN 1026
L I + L D+G Y C H + + ++G
Sbjct: 62 DDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEG---------------- 105
Query: 1027 ATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTM 1086
P F + +D V + C+ + +P
Sbjct: 106 --------------------------LPYFLEEPED-RTVAANTPFNLSCQAQGPPEPV- 137
Query: 1087 RIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
+ W + P AT L+ + + C A N G ++
Sbjct: 138 DLLWLQDAVPLATAPGHGPQRSLHVPGLN-------KTSSFSCEAHNAKGVTTSRT 186
Score = 87.6 bits (217), Expect = 1e-19
Identities = 32/206 (15%), Positives = 63/206 (30%), Gaps = 40/206 (19%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+ F + ++ G + G + C L V +V W +G+ + + + G
Sbjct: 1 EESPFVGNPGNITGAR-GLTGTLRCQL-QVQGEPPEVHWLRDGQILELADSTQTQVPLGE 58
Query: 467 VVMD---------IAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRL 506
D I +Q D+G+Y C + + P+ F+
Sbjct: 59 DEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPY--FLEE---- 112
Query: 507 PSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDM 566
P + V + C+ + +P + W + P AT L+
Sbjct: 113 PE----DRTVAANTPFNLSCQAQGPPEPV-DLLWLQDAVPLATAPGHGPQRSLHVPGLN- 166
Query: 567 DYVYARDSGEYICRATNKWGTAMTKA 592
+ + C A N G ++
Sbjct: 167 ------KTSSFSCEAHNAKGVTTSRT 186
Score = 84.6 bits (209), Expect = 2e-18
Identities = 26/192 (13%), Positives = 49/192 (25%), Gaps = 55/192 (28%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
+ FV + + CQ V +V W +G+ L + G
Sbjct: 1 EESPFVGNP--GNITGARGLTGTLRCQ-LQVQGEPPEVHWLRDGQILELADSTQTQVPLG 57
Query: 1482 YVAMNFGW---------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKG 1532
+ + D+G+Y C + ++
Sbjct: 58 EDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVG--------------- 102
Query: 1533 MKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP 1592
+E P F+ +PE + V P + G P P
Sbjct: 103 ---------------------LE-----GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEP 136
Query: 1593 -RVMWLINGHTI 1603
++WL + +
Sbjct: 137 VDLLWLQDAVPL 148
Score = 84.2 bits (208), Expect = 2e-18
Identities = 22/153 (14%), Positives = 49/153 (32%), Gaps = 30/153 (19%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKI---------IPDIRYKT 1791
F+ + G ++ +P +V+WL++G+ + +P +
Sbjct: 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQ 61
Query: 1792 LEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCE-AELVVQSKKAPGKQAPAPGAAVA 1850
+ + L I + D+G Y+C+ + + ++
Sbjct: 62 DDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLE----------------- 104
Query: 1851 QDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P E +D+ V + L C+ G P
Sbjct: 105 --GLPYFLEEPEDRTVAANTPFNLSCQAQGPPE 135
Score = 83.0 bits (205), Expect = 7e-18
Identities = 28/211 (13%), Positives = 55/211 (26%), Gaps = 45/211 (21%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITAT----- 1614
E FV P G C P V WL +G + +
Sbjct: 1 EESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDE 60
Query: 1615 ------------ETTEMEHKGK----IQERVVDASEKPAK-----PPVFTKKIQPCRAFE 1653
+ ++ G+ + +P P F ++ +
Sbjct: 61 QDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAA 120
Query: 1654 QDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 1712
+ G P P + W ++ P+ ++P +S+ + + + F+
Sbjct: 121 NTPFNLSCQAQGPPEPVDLLWLQDAVPLATAP----GHGPQRSLHVPG---LNKTSSFSC 173
Query: 1713 IAENRGGKAKCSANLVVEEKRQGGRGGVVPP 1743
A N G + V+P
Sbjct: 174 EAHNAKGVTTSRTATIT----------VLPQ 194
Score = 75.3 bits (185), Expect = 3e-15
Identities = 32/264 (12%), Positives = 56/264 (21%), Gaps = 83/264 (31%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFI-------NIST 1315
E F+ ++T C L P + +
Sbjct: 1 EESPFVGNPGNITGARGLTGTLR--------------CQLQVQGEPPEVHWLRDGQILEL 46
Query: 1316 AFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKK 1375
A + L I + D G+Y C + H ++
Sbjct: 47 ADSTQTQVPLGEDEQDDWIVVS--QLRITSLQLSDTGQYQCLVFLGHQTFVSQ------- 97
Query: 1376 IPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQD 1435
+ + P F+ + +D
Sbjct: 98 --PGYVGLEG--------------------------------------LPYFLEEP--ED 115
Query: 1436 QLVEM-QSTKFECQLAPVGDPN-MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPE 1493
+ V CQ G P + + W + PL P
Sbjct: 116 RTVAANTPFNLSCQ--AQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPG-------LN 166
Query: 1494 DSGEYLCRATNLYGMDETRAILKT 1517
+ + C A N G+ +R T
Sbjct: 167 KTSSFSCEAHNAKGVTTSRTATIT 190
Score = 70.3 bits (172), Expect = 1e-13
Identities = 25/202 (12%), Positives = 50/202 (24%), Gaps = 71/202 (35%)
Query: 10 KIEWFKNGVPLSLGSRIRSTFDFGLV---------TLSINSLRADDSAIYTCKATNLLGE 60
++ W ++G L L ++ G L I SL+ D+ Y C
Sbjct: 34 EVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQT 93
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
VS ++ + P F+ D
Sbjct: 94 FVS-------QPGYV----------------------------GLEGLPYFLEEPEDRTV 118
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPE-LKVEWFHNGKPIFHKNRVKMVSD 179
N + C+ + G PE + + W + P+
Sbjct: 119 AANTPFNLSCQAQ---------G----------PPEPVDLLWLQDAVPLATAPGHGPQR- 158
Query: 180 FGFVVMDIAYVQSHDSGEYVCQ 201
+ + + + + C+
Sbjct: 159 ----SLHVPGLN--KTSSFSCE 174
Score = 62.6 bits (152), Expect = 7e-11
Identities = 23/186 (12%), Positives = 45/186 (24%), Gaps = 47/186 (25%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI---------S 563
N+ C+L + W +G+ +T G
Sbjct: 11 NITGARGLTGTLRCQL-QVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQ 69
Query: 564 LDMDYVYARDSGEYICRATNKWGTAMT-KAKVI-------------------------CK 597
L + + D+G+Y C T ++ V C+
Sbjct: 70 LRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQ 129
Query: 598 V----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
V + W + L + + L + + C A N G
Sbjct: 130 AQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGL-------NKTSSFSCEAHNAKGVT 182
Query: 654 VTKASL 659
++ +
Sbjct: 183 TSRTAT 188
Score = 62.2 bits (151), Expect = 1e-10
Identities = 27/188 (14%), Positives = 53/188 (28%), Gaps = 44/188 (23%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+ F NI G +L +P +V W +G+ ++ +T G
Sbjct: 1 EESPFVGNPGNIT-GARGLTGTLRCQLQVQGEP-PEVHWLRDGQILELADSTQTQVPLGE 58
Query: 765 V---------ILEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRSIILESQ---- 810
L I+ + D GQY C + + V+ + ++G + E +
Sbjct: 59 DEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTV 118
Query: 811 --------------LPK---------GMEVFISFHEISP-----VYPEDCGQYSCRAYND 842
P+ + + + +SC A+N
Sbjct: 119 AANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQRSLHVPGLNKTSSFSCEAHNA 178
Query: 843 YGEAVTSA 850
G +
Sbjct: 179 KGVTTSRT 186
Score = 61.8 bits (150), Expect = 1e-10
Identities = 22/168 (13%), Positives = 47/168 (27%), Gaps = 28/168 (16%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYV---------ALDIVGAYAEDSGIYTVKATNSKG 287
P W + + L +T G L I D+G Y
Sbjct: 33 PEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQ 92
Query: 288 SATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTVEFL 345
+ + + + P F + + ++ + +A P + + + +L
Sbjct: 93 TFVSQPG-----YVGL-EGLPYFLEEPEDR-TVAANTPFNLSCQAQGPP---EPVDLLWL 142
Query: 346 YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+ P+ + L + + T ++C A N G
Sbjct: 143 QDAVPLATAPGHGPQR-----SLHV--PGLNKTSSFSCEAHNAKGVTT 183
Score = 61.1 bits (148), Expect = 2e-10
Identities = 28/215 (13%), Positives = 55/215 (25%), Gaps = 59/215 (27%)
Query: 107 DSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
+ F+ + ++ C++ V +V W +G+
Sbjct: 1 EESPFVGNPGNITGARGLTGTLRCQL------------------QVQGEPPEVHWLRDGQ 42
Query: 167 PIFHKNRVKMVSDFGFVVMD---------IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKT 217
+ + + G D I +Q D+G+Y C V
Sbjct: 43 ILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCL--VFL---GHQTFVSQ 97
Query: 218 TH--------DFGYVALDIELMLKTLVPFT------------EWFVNNKPLPAGAKFKTT 257
F D + T + W + PL
Sbjct: 98 PGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGHGPQ 157
Query: 258 HDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
+L + G + ++ +A N+KG T+
Sbjct: 158 R-----SLHVPG--LNKTSSFSCEAHNAKGVTTSR 185
Score = 60.7 bits (147), Expect = 3e-10
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 10/89 (11%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPS-MTVEWFHNGKALSAGSRIKTINDFGFV 974
P FL P D T+A +T + C+ P + + W + L+
Sbjct: 106 LPYFLEEPEDRTVAANTPFNLSCQ--AQGPPEPVDLLWLQDAVPLATAPGHGPQR----- 158
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTS 1003
L + + + ++C+A N G T+
Sbjct: 159 SLHVPGL--NKTSSFSCEAHNAKGVTTSR 185
Score = 59.9 bits (145), Expect = 5e-10
Identities = 26/204 (12%), Positives = 51/204 (25%), Gaps = 63/204 (30%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIV---------ILDILYCYEENSGVYECRATNKYGSD 653
V W +G+ L +T G L I ++G Y+C + +
Sbjct: 35 VHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTF 94
Query: 654 VTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPL 713
V++ + P F
Sbjct: 95 VSQ-----------------------------------------PGYVGLEGLPYFLEEP 113
Query: 714 SNIDDLREGENAHF--EARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISP 771
+ + + +A+ P P + + W + P+ T L +
Sbjct: 114 EDRT-VAANTPFNLSCQAQGPPE--P-VDLLWLQDAVPLATAPG-----HGPQRSLHVPG 164
Query: 772 VYPEDCGQYSCRAYNDYGEAVTSA 795
+ +SC A+N G +
Sbjct: 165 L--NKTSSFSCEAHNAKGVTTSRT 186
Score = 52.2 bits (125), Expect = 2e-07
Identities = 13/99 (13%), Positives = 27/99 (27%), Gaps = 11/99 (11%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
F + + C+L + W +G+ +T G
Sbjct: 2 ESPFVGNPGN-ITGARGLTGTLRCQL-QVQGEPPEVHWLRDGQILELADSTQTQVPLGED 59
Query: 1113 ---------SLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
L + + D+G+Y C T +++
Sbjct: 60 EQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQP 98
Score = 51.1 bits (122), Expect = 5e-07
Identities = 10/56 (17%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
Query: 9 LKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+ + W ++ VPL+ S++ + ++ ++C+A N G S
Sbjct: 137 VDLLWLQDAVPLATAPGHGPQ-------RSLHVPGLNKTSSFSCEAHNAKGVTTSR 185
Score = 40.3 bits (94), Expect = 0.003
Identities = 12/82 (14%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 801 GKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQGKRS 859
++ + + + + +S I+ + D GQY C + + V+ + ++G
Sbjct: 49 STQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPY 108
Query: 860 IILESQLPKGMEGTIDKIAELE 881
+ E P+ + L
Sbjct: 109 FLEE---PEDRTVAANTPFNLS 127
Score = 36.0 bits (83), Expect = 0.061
Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 25/108 (23%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
E P F+ E E TV P + + +P +++ +L
Sbjct: 104 EGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEP----------------VDLL--WLQDA 145
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKA 1369
L P L L + C A+N G ++
Sbjct: 146 VPLATAPGHGPQRSLHVPGL-------NKTSSFSCEAHNAKGVTTSRT 186
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing,
ATP-binding, calcium, calmodulin-binding, cardiomyopathy;
1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T
2wwm_D 2y9r_T*
Length = 100
Score = 99.3 bits (248), Expect = 9e-25
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 4/99 (4%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDF 971
G P+ P+D+++ E + C T +P+ V W G+ + R N
Sbjct: 3 GIPPKIEALPSDISIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTD 60
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
L I DV +D GLYT N+ G + + + ++
Sbjct: 61 DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99
Score = 94.7 bits (236), Expect = 3e-23
Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD--IRYKTLEEDNLF 1798
+PP S I+ G++ + +V W G+KI R+ D+L
Sbjct: 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLT 63
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
TL+I++ +D G Y N G + ++S
Sbjct: 64 TLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99
Score = 94.7 bits (236), Expect = 4e-23
Identities = 21/97 (21%), Positives = 34/97 (35%), Gaps = 2/97 (2%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK- 1694
P PP E F G+P P + W I S + H +T
Sbjct: 2 PGIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDD 61
Query: 1695 -SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 1730
+ LI+ V +D G++ + N G + N+ +
Sbjct: 62 LTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIR 98
Score = 84.3 bits (209), Expect = 2e-19
Identities = 20/99 (20%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS--RFRTFCDF 762
P S+I + EG+ T +P +V W G+ + + RF
Sbjct: 4 IPPKIEALPSDIS-IDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTD 60
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L I V +D G Y+ N++G + ++ ++
Sbjct: 61 DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99
Score = 70.8 bits (174), Expect = 1e-14
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 2/68 (2%)
Query: 6 DPNLKIEWFKNGVPL--SLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P ++ W G + R L TL I ++ D +YT N G +
Sbjct: 32 EPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSA 91
Query: 64 TCTLKIED 71
T + I
Sbjct: 92 TVNIHIRS 99
Score = 67.3 bits (165), Expect = 1e-13
Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF--ATGSRVKTVYDFG 1110
PP + D + + E + C +PT + W GR R
Sbjct: 5 PPKIEALPSD-ISIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDD 61
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+L + V +D G Y N++G+ +
Sbjct: 62 LTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96
Score = 66.2 bits (162), Expect = 3e-13
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 5/85 (5%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN--RVKMVSD 463
G PPK + + + +G C T +P +V W G+ I + R + +
Sbjct: 3 GIPPKIEALPSDIS-IDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENT 59
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWN 488
+ I VQ D G Y N
Sbjct: 60 DDLTTLIIMDVQKQDGGLYTLSLGN 84
Score = 65.8 bits (161), Expect = 5e-13
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN--RFNPIYDF 1480
PP+ + E + C G+P +V W G+ + + RF+
Sbjct: 4 IPPKIEALPSDI-SIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTD 60
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ V +D G Y N +G D +
Sbjct: 61 DLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96
Score = 60.8 bits (148), Expect = 3e-11
Identities = 20/88 (22%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS--HRIRTVHAFGMVVLEI 370
S++S EG++ + G+ T V + G+ I + R + + L I
Sbjct: 10 ALPSDISIDEGKVLTVACAF--TGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLII 67
Query: 371 LGTKIEDTGVYTCRATNKWGQAEISVNL 398
+ + +D G+YT N++G +VN+
Sbjct: 68 MDVQKQDGGLYTLSLGNEFGSDSATVNI 95
Score = 60.0 bits (146), Expect = 5e-11
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 21/94 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + +D+ E + + C G +P +V W G+ I
Sbjct: 6 PKIEALPSDISIDEGKVLTVACAFT---------G----------EPTPEVTWSCGGRKI 46
Query: 169 FHKN--RVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+ R + + + I VQ D G Y
Sbjct: 47 HSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80
Score = 60.0 bits (146), Expect = 6e-11
Identities = 15/86 (17%), Positives = 28/86 (32%), Gaps = 4/86 (4%)
Query: 512 DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF--ATGSRVKTVYDFGFISLDMDYV 569
++ + E + C +PT + W GR R +L + V
Sbjct: 13 SDISIDEGKVLTVACAFT--GEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDV 70
Query: 570 YARDSGEYICRATNKWGTAMTKAKVI 595
+D G Y N++G+ +
Sbjct: 71 QKQDGGLYTLSLGNEFGSDSATVNIH 96
Score = 59.2 bits (144), Expect = 1e-10
Identities = 14/58 (24%), Positives = 20/58 (34%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATET 1616
P P + P + EG+ TG P P V W G I ++ + T
Sbjct: 2 PGIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENT 59
Score = 58.1 bits (141), Expect = 3e-10
Identities = 18/133 (13%), Positives = 29/133 (21%), Gaps = 51/133 (38%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-------------DPRLRVECSLS 1303
P PP+ +++ E + + P V R +E
Sbjct: 2 PGIPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIEN--- 58
Query: 1304 TAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHG 1363
+L I V +D G Y N+ G
Sbjct: 59 -------------------------------TDDLTTLIIMDVQKQDGGLYTLSLGNEFG 87
Query: 1364 EAFTKATISCKKI 1376
I + I
Sbjct: 88 SDSATVNIHIRSI 100
Score = 57.7 bits (140), Expect = 3e-10
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 603 VEWFYNGKKLPH--GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W G+K+ R+ + + L I+ +++ G+Y N++GSD ++
Sbjct: 37 VTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96
Score = 56.6 bits (137), Expect = 8e-10
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 241 WFVNNKPLPA--GAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W + + + +F + L I+ +D G+YT+ N GS + + +
Sbjct: 39 WSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIH 96
Score = 43.8 bits (104), Expect = 3e-05
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + D ++ EG +T+ C TG+P
Sbjct: 5 PPKIEALPSDISIDEGKVLTVACAFTGEPT 34
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 99
Score = 98.2 bits (245), Expect = 2e-24
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 910 EEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIN 969
+ AP F + D + E +C + P + W NG+ +
Sbjct: 5 SSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---C 59
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ G L I D D G YTC A N G+ + S +TV
Sbjct: 60 EAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 92.0 bits (229), Expect = 3e-22
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
V PSF + + + GQ + T + WL NG+ I E + L
Sbjct: 10 VAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARST---CEAGVAEL 66
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
I +A+ ED G Y C+A N G+ C A + V
Sbjct: 67 HIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99
Score = 91.2 bits (227), Expect = 6e-22
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR 757
+ AP F+ L + + EG++ + + P ++ W NG+P++ R
Sbjct: 3 SGSSGMEVAPSFSSVLKDCA-VIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYA---R 56
Query: 758 TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ C+ G L I PED G Y+C A N G+ SA + V
Sbjct: 57 STCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99
Score = 91.2 bits (227), Expect = 6e-22
Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S P F+ ++ C E + G P+P I W PI +
Sbjct: 4 GSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARSTCEAGV 63
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
+ L ++ ED G + +AEN G+ CSA + V
Sbjct: 64 AE---LHIQDALPEDHGTYTCLAENALGQVSCSAWVTV 98
Score = 74.3 bits (183), Expect = 5e-16
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP 1476
+ P F + + +D V E Q +C + G P ++ W LNG+P+ +
Sbjct: 5 SSGMEVAPSFSSVL--KDCAVIEGQDFVLQCSV--RGTPVPRITWLLNGQPIQYARST-- 58
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ G ++ PED G Y C A N G A +
Sbjct: 59 -CEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 73.9 bits (182), Expect = 8e-16
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
R P +I W NG P+ RST + G+ L I +D YTC A N LG+
Sbjct: 36 RGTPVPRITWLLNGQPIQYA---RSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSC 92
Query: 64 TCTLKI 69
+ + +
Sbjct: 93 SAWVTV 98
Score = 72.4 bits (178), Expect = 2e-15
Identities = 26/93 (27%), Positives = 32/93 (34%), Gaps = 6/93 (6%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P F+S L+D V E C + P RI W NG+P + G
Sbjct: 11 APSFSSVLKD-CAVIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---CEAGVA 64
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + D G Y C A N G A V
Sbjct: 65 ELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 65.0 bits (159), Expect = 8e-13
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 402 DKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 461
P F+S +K + +G +C++ P ++ W NG+PI R
Sbjct: 5 SSGMEVAPSFSSVLKDCA-VIEGQDFVLQCSVR--GTPVPRITWLLNGQPI-QYAR--ST 58
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ G + I D G Y C A N
Sbjct: 59 CEAGVAELHIQDALPEDHGTYTCLAEN 85
Score = 62.0 bits (151), Expect = 1e-11
Identities = 21/83 (25%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V E C + P RI W NG+P + G L +
Sbjct: 20 DCAVIEGQDFVLQCSVR--GTPVPRITWLLNGQPIQYARST---CEAGVAELHIQDALPE 74
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D G Y C A N G A V
Sbjct: 75 DHGTYTCLAENALGQVSCSAWVT 97
Score = 61.6 bits (150), Expect = 1e-11
Identities = 23/111 (20%), Positives = 35/111 (31%), Gaps = 22/111 (19%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFN 1321
E P F + ++ V E + + V R P R+ + I
Sbjct: 9 EVAPSFSSVLKDCAVIEGQDFVLQCSV--RGTPVPRIT------WLLNGQPIQY------ 54
Query: 1322 FCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+ + G L I PED G Y C A N G+ A ++
Sbjct: 55 --------ARSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 61.6 bits (150), Expect = 1e-11
Identities = 22/92 (23%), Positives = 29/92 (31%), Gaps = 22/92 (23%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P F S L D E ++ C V G P ++ W NG+PI
Sbjct: 12 PSFSSVLKDCAVIEGQDFVLQCSVR---------G----------TPVPRITWLLNGQPI 52
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
R + G + I D G Y C
Sbjct: 53 -QYAR--STCEAGVAELHIQDALPEDHGTYTC 81
Score = 61.2 bits (149), Expect = 2e-11
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P FS L + + EG+ + S+ G + +L NG+PI+ + G+
Sbjct: 12 PSFS---SVLKDCAVIEGQDFVLQCSV--RGTPVPRITWLLNGQPIQYARSTCEA---GV 63
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L I ED G YTC A N GQ S +
Sbjct: 64 AELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 59.6 bits (145), Expect = 8e-11
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W +N +P+ ++T + G L I A ED G YT A N+ G + S +
Sbjct: 41 PRITWLLNGQPIQYA---RSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 57.3 bits (139), Expect = 5e-10
Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ W NG+ + + R+ + G+ L I E+ G Y C A N G A +
Sbjct: 43 ITWLLNGQPIQYA---RSTCEAGVAELHIQDALPEDHGTYTCLAENALGQVSCSAWVT 97
Score = 56.9 bits (138), Expect = 6e-10
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 1556 DEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
+ AP F S + V EG+ V G P PR+ WL+NG I
Sbjct: 5 SSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPI 52
Score = 50.8 bits (122), Expect = 1e-07
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I PED G Y+C A N G+ SA + V
Sbjct: 67 HIQDALPEDHGTYTCLAENALGQVSCSAWVTVH 99
Score = 45.8 bits (109), Expect = 5e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 1847 AAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ + AP+ + LKD V EG L+C + G P
Sbjct: 4 GSSGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPV 40
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 99
Score = 96.7 bits (241), Expect = 7e-24
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G + + L CRL D ++ W +G L+ +R + +
Sbjct: 1 GSSGSSGVEVESFLVHPGDLLQLRCRLR---DDVQSINWLRDGVQLAESNRTRITGE--- 54
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+E+ D DSGLY C ++ G TT + V
Sbjct: 55 -EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89
Score = 77.0 bits (190), Expect = 5e-17
Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
S + S +++ G L + ++ + WL++G ++ R + E +
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDD-VQSINWLRDGVQLAESNRTRITGE----EVE 57
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPG 1846
+ ++V DSG Y CV + +G + V G P+ G
Sbjct: 58 VQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSG---PSSG 99
Score = 68.6 bits (168), Expect = 6e-14
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 10 KIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKI 69
I W ++GV L+ +R R T + + + DS +Y C ++ G + ++ +
Sbjct: 33 SINWLRDGVQLAESNRTRITGE----EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNV 88
Query: 70 EDR 72
D
Sbjct: 89 SDA 91
Score = 66.6 bits (163), Expect = 2e-13
Identities = 14/94 (14%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
+++ D + D +I W R+ + S +I T +
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRI----TGEEVE 57
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
++ DSG++A + + G ++ V +
Sbjct: 58 VQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDA 91
Score = 65.5 bits (160), Expect = 6e-13
Identities = 19/99 (19%), Positives = 33/99 (33%), Gaps = 8/99 (8%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
+ V + + + G+ RL D + W +G + +R R
Sbjct: 3 SGSSGVEVESFL-VHPGDLLQLRCRLR---DDVQSINWLRDGVQLAESNRTR----ITGE 54
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
+E+ P D G Y+C + G T S+ V
Sbjct: 55 EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALP 93
Score = 65.5 bits (160), Expect = 7e-13
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 8/85 (9%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
G ++S + GD C + D + W +G + NR ++ +
Sbjct: 1 GSSGSSGVEVESFL-VHPGDLLQLRC---RLRDDVQSINWLRDGVQLAESNRTRITGE-- 54
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF 490
+++ DSG Y C +
Sbjct: 55 --EVEVQDSVPADSGLYACVTSSPS 77
Score = 63.6 bits (155), Expect = 3e-12
Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 1052 NPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 1111
+ +++ V + CRL D I+W +G A +R + +
Sbjct: 2 SSGSSGVEVES-FLVHPGDLLQLRCRL---RDDVQSINWLRDGVQLAESNRTRITGE--- 54
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+++ DSG Y C ++ G+ T V
Sbjct: 55 -EVEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87
Score = 61.6 bits (150), Expect = 2e-11
Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 22/105 (20%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP------ 1476
++ + LV + C + D + W +G L NR
Sbjct: 3 SGSSGVEV--ESFLVHPGDLLQLRC---RLRDDVQSINWLRDGVQLAESNRTRITGEEVE 57
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ D P DSG Y C ++ G D T + +
Sbjct: 58 VQD----------SVPADSGLYACVTSSPSGSDTTYFSVNVSDAL 92
Score = 60.1 bits (146), Expect = 5e-11
Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 8/102 (7%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
++ + + G++ + D ++ +L +G + S+R R
Sbjct: 4 GSSGVEVESFL-VHPGDLLQLRC---RLRDDVQSINWLRDGVQLAESNRTR----ITGEE 55
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
+E+ + D+G+Y C ++ G ++ D P
Sbjct: 56 VEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALPSGPS 97
Score = 57.4 bits (139), Expect = 4e-10
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
++ V + CRL D I+W +G A +R + + +++
Sbjct: 7 GVEVESFLVHPGDLLQLRCRL---RDDVQSINWLRDGVQLAESNRTRITGE----EVEVQ 59
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI 595
DSG Y C ++ G+ T V
Sbjct: 60 DSVPADSGLYACVTSSPSGSDTTYFSVN 87
Score = 52.4 bits (126), Expect = 2e-08
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W +G +L +R R +++ +SG+Y C ++ GSD T S+
Sbjct: 34 INWLRDGVQLAESNRTR----ITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSV 86
Score = 52.4 bits (126), Expect = 2e-08
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W + L + + T + +++ + DSG+Y ++ GS TT ++
Sbjct: 32 QSINWLRDGVQLAESNRTRITGEE----VEVQDSVPADSGLYACVTSSPSGSDTTYFSVN 87
Query: 297 CLERL 301
+ L
Sbjct: 88 VSDAL 92
Score = 51.2 bits (123), Expect = 6e-08
Identities = 14/123 (11%), Positives = 28/123 (22%), Gaps = 52/123 (42%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVE---PRV-----------DPRLRVECSLSTAFFFP 1309
E+ES V + ++ R+ + R R+
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDVQSINWLRDGVQLAESNRTRITGE-------- 54
Query: 1310 FINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKA 1369
+++ P D G Y C + G T
Sbjct: 55 ------------------------------EVEVQDSVPADSGLYACVTSSPSGSDTTYF 84
Query: 1370 TIS 1372
+++
Sbjct: 85 SVN 87
Score = 50.5 bits (121), Expect = 1e-07
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 24/95 (25%)
Query: 107 DSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
S + + + CR+ D + W +G
Sbjct: 2 SSGSSGVEVESFLVHPGDLLQLRCRLR--------------------DDVQSINWLRDGV 41
Query: 167 PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ NR ++ + +++ DSG Y C
Sbjct: 42 QLAESNRTRITGE----EVEVQDSVPADSGLYACV 72
Score = 43.1 bits (102), Expect = 4e-05
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 859
E+ P D G Y+C + G T S+ V
Sbjct: 57 EVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDALP 93
Score = 42.4 bits (100), Expect = 8e-05
Identities = 7/44 (15%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
+ + E+ V G+ + R+ + WL +G +
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAE 45
Score = 35.4 bits (82), Expect = 0.023
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ + ++ V G + L+CR+
Sbjct: 3 SGSSGVEVESFLVHPGDLLQLRCRLRDDV 31
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil,
immunoglobulin, immune system, extracellular; HET: NAG;
3.10A {Homo sapiens} PDB: 3o4o_B*
Length = 349
Score = 104 bits (259), Expect = 8e-24
Identities = 47/331 (14%), Positives = 86/331 (25%), Gaps = 48/331 (14%)
Query: 310 FSLQFQHLSNLSEGEIAHFEASLI---------PVGDQTMTVEFLYNGKPIEASHRIRTV 360
+ L + E E A + L +T+ + + + + I
Sbjct: 9 WGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFR 68
Query: 361 HAFGMV-----VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHI 415
+ VL T + DTG YTC N ++++ LE V K +
Sbjct: 69 LPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPV 128
Query: 416 KSLEGLKDGDSAHFECTLT---PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIA 472
L C + + + W+ I + N V +
Sbjct: 129 HKLYIE--YGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMN----LSFL 182
Query: 473 YVQSHDSGEYVCRAWNNF------------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
++G Y C + + P + +
Sbjct: 183 IALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGE 242
Query: 521 KVHFDCR--LEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR------ 572
++ C D + W +G+ + T+ + S D +
Sbjct: 243 ELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKK 302
Query: 573 -----DSGEYICRATNKWGTAMTKAKVICKV 598
Y+C A + G AKV KV
Sbjct: 303 VTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333
Score = 93.0 bits (230), Expect = 5e-20
Identities = 46/330 (13%), Positives = 80/330 (24%), Gaps = 70/330 (21%)
Query: 1566 VSQPEAQKVQEGEPARF-----------CTRVTGYPRPRVMWLINGHTIVNEIVRKITAT 1614
+ +V E EPAR ++W E
Sbjct: 11 LDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLP 70
Query: 1615 ETTEMEHKGKIQERVVDAS-------------------------EKPAKPPVFTKKIQPC 1649
E + K + R + +K + K
Sbjct: 71 ENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHK 130
Query: 1650 RAFEQDQARF-----EVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 1704
E R + F PTI W+ + I + + L +
Sbjct: 131 LYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFN----NVIPEGMNLSFLIALI 186
Query: 1705 EDSG----VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLA 1760
++G V R + + V VPP + V
Sbjct: 187 SNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP----KNAVPPVIHSPNDHVVYEKEPGE 242
Query: 1761 RFDAKISATKPLD------VYWLKNGKKIIPD---------IRYKTLEEDNLFTLLIIEA 1805
+ V+W +GKK I + E++ +L I+
Sbjct: 243 ELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKK 302
Query: 1806 VVED--SGAYECVAMNNAGEARCEAELVVQ 1833
V + +Y C A + GE A++ +
Sbjct: 303 VTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332
Score = 91.1 bits (225), Expect = 2e-19
Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 24/244 (9%)
Query: 264 ALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEG 323
L D+G YT N+ + + L+ +++ N P+ +
Sbjct: 80 VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSC-FNSPMKLPVHKLYIEYGIQ 138
Query: 324 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 383
I T+ + I+ + + + L L I + G YTC
Sbjct: 139 RITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVI----PEGMNLSFLIALISNNGNYTC 194
Query: 384 RAT----NKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLK--DGDSAHFEC--TLTP 435
T + ++ ++ V K P + G+ C +
Sbjct: 195 VVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSF 254
Query: 436 VNDPELKVEWFHNGKPIFH----------KNRVKMVSDFGFVVMDIAYVQSHD-SGEYVC 484
+ D +V W +GK + + + ++ I V S D YVC
Sbjct: 255 LMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVC 314
Query: 485 RAWN 488
A +
Sbjct: 315 HARS 318
Score = 86.8 bits (214), Expect = 5e-18
Identities = 37/244 (15%), Positives = 67/244 (27%), Gaps = 26/244 (10%)
Query: 1648 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST-----KSILIMRQV 1702
C FE +F T+ W+ K +L R
Sbjct: 28 KCPLFE-HFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPT 86
Query: 1703 FMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARF 1762
+ D+G + + N +K + L V +K + P I + +
Sbjct: 87 LLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRI-TCPNV 145
Query: 1763 DAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG 1822
D ++ + W K I + E L + A++ ++G Y CV
Sbjct: 146 DGYFPSSVKPTITWYMGCYK-IQNFNNVIPEGM---NLSFLIALISNNGNYTCVVTYPEN 201
Query: 1823 EARCE--AELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQN--VKEGSAVTLKCRI 1878
L V+ +P P P + P + G + + C +
Sbjct: 202 GRTFHLTRTLTVKVVGSPKNAVP-----------PVIHSPNDHVVYEKEPGEELLIPCTV 250
Query: 1879 TGKP 1882
Sbjct: 251 YFSF 254
Score = 85.7 bits (211), Expect = 1e-17
Identities = 51/330 (15%), Positives = 85/330 (25%), Gaps = 57/330 (17%)
Query: 720 REGENAHFE---------ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI---- 766
E E A + + L + W+W + +
Sbjct: 20 FEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD 79
Query: 767 -LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEIS 825
L P D G Y+C N + + ++V K S +++I +
Sbjct: 80 VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQR 139
Query: 826 PVYPEDCGQYSCRAYNDYGEAVT--SASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
C + +T K+Q ++I E GM +
Sbjct: 140 IT----CPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPE-----GMNLSFLIA------ 184
Query: 884 GHEREDR---TIDKIAELEGYGHEREDRI-----EEDLGKAPEFLTTPTDLTLAESTLAH 935
+ T G + P + +P D + E
Sbjct: 185 --LISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGE 242
Query: 936 ---FECR--LTPTNDPSMTVEWFHNGKALSAG----------SRIKTINDFGFVILEIND 980
C + D V W +GK S +T ++ IL I
Sbjct: 243 ELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKK 302
Query: 981 VYLRD-SGLYTCKATNKHGEATTSCKLTVK 1009
V D Y C A + GE + K+ K
Sbjct: 303 VTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332
Score = 85.7 bits (211), Expect = 1e-17
Identities = 37/343 (10%), Positives = 71/343 (20%), Gaps = 108/343 (31%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
P D G Y+C N + + ++V K S
Sbjct: 82 WFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPM----------------- 124
Query: 883 YGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTP 942
+ + +
Sbjct: 125 -----------------------------------KLPVHKLYIEYGIQRITCPNVDGYF 149
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKH----G 998
+ T+ W+ + + + L + ++G YTC T
Sbjct: 150 PSSVKPTITWYMGCYKIQNFNNVIPEGMN----LSFLIALISNNGNYTCVVTYPENGRTF 205
Query: 999 EATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTS 1058
T + + V G V P + + +
Sbjct: 206 HLTRTLTVKVVGSPKNAVPPVIHSPNDHVV------------------------------ 235
Query: 1059 QLQDNLDVPEAGKVHFDCR--LEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDM 1116
+ ++ C D + W +G+ + T+ + S
Sbjct: 236 -----YEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTE 290
Query: 1117 DYVYAR-----------DSGEYICRATNKWGTAMTKAKVICKA 1148
D + Y+C A + G AKV K
Sbjct: 291 DETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333
Score = 82.2 bits (202), Expect = 2e-16
Identities = 50/353 (14%), Positives = 85/353 (24%), Gaps = 101/353 (28%)
Query: 513 NLDVPEAGKVHFDCRL---------EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 563
+ V E C L + + W++ + + IS
Sbjct: 16 QIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRIS 75
Query: 564 LDMDY-----VYARDSGEYICRATNKWGTAMTKAKV------------------------ 594
+ D D+G Y C N + +
Sbjct: 76 KEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEY 135
Query: 595 -----ICKVLTVI--------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGV 641
C + + W+ K+ + + L L N+G
Sbjct: 136 GIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMN----LSFLIALISNNGN 191
Query: 642 YECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADI 701
Y C T + L
Sbjct: 192 YTCVVTYPENGRTFHLT--------------------------------RTLTVKVVGSP 219
Query: 702 EHRQAPVFTVPLSNID-DLREGENAHF--EARLTPTDDPKLKVEWFWNGKP--------- 749
++ PV P ++ + GE + D + +V W +GK
Sbjct: 220 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVT 279
Query: 750 -MKTGSRFRTFCDFGFVILEISPVYPEDCG-QYSCRAYNDYGEAVTSASMKVQ 800
++ S RT + IL I V ED Y C A + GE +A +K +
Sbjct: 280 INESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQK 332
Score = 78.0 bits (191), Expect = 4e-15
Identities = 48/343 (13%), Positives = 97/343 (28%), Gaps = 56/343 (16%)
Query: 112 ISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHK 171
+ + ++ E+E C + L + + L + W+ + +
Sbjct: 11 LDTMRQIQVFEDEPARIKCPLFE--------HFLKFNYSTAHSAGLTLIWYWTRQDRDLE 62
Query: 172 NRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCQWFVNN-----------KPLPAGAKF 215
+ + + +D+G Y C + N + + + F
Sbjct: 63 EPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCM--LRNTTYCSKVAFPLEVVQKDSCF 120
Query: 216 KTTHDFGYVALDIELMLKTLV-PFTEWFVNNKPLPAGAKFK--------TTHDFGYVALD 266
+ L IE ++ + P + + + P + + L
Sbjct: 121 NSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGMNLS 180
Query: 267 IVGAYAEDSGIYTVKAT----NSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSE 322
+ A ++G YT T T + T+K + + S +
Sbjct: 181 FLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEP 240
Query: 323 GEIAHF--EASLIPVGDQTMTVEFLYNGKPI----------EASHRIRTVHAFGMVVLEI 370
GE + D V + +GK E+ RT +L I
Sbjct: 241 GEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSI 300
Query: 371 LGTKIEDTGV-YTCRATNKWGQAEISVNLECVDKSKGQPPKFT 412
ED Y C A + G+ + + K K P++T
Sbjct: 301 KKVTSEDLKRSYVCHARSAKGEVAKAAKV----KQKVPAPRYT 339
Score = 72.6 bits (177), Expect = 2e-13
Identities = 41/354 (11%), Positives = 79/354 (22%), Gaps = 100/354 (28%)
Query: 1438 VEMQSTKFECQLA---------PVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFG 1488
E + + +C L + + W+ + + N ++
Sbjct: 20 FEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKD 79
Query: 1489 W-----VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREME 1543
D+G Y C N + L+
Sbjct: 80 VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLE--------------------------- 112
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTR----VTGYPRPRVMWLI 1598
V +K + P + E R C +P + W +
Sbjct: 113 ----------VV-QKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYM 161
Query: 1599 NGHTIVNEIVRKITATETT------EMEHKGK-----------IQERV-------VDASE 1634
+ I N + + + G + V S
Sbjct: 162 GCYKIQNF--NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP 219
Query: 1635 KPAKPPVFTKKIQPCRAFEQDQARFEVE------FDGDPLPTIKWFREDFPITSSPDFQI 1688
K A PPV ++ + F D + W +
Sbjct: 220 KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVT 279
Query: 1689 HTFSTK----------SILIMRQVFMEDSGV-FAVIAENRGGKAKCSANLVVEE 1731
S IL +++V ED + A + G+ +A + +
Sbjct: 280 INESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVKQKV 333
Score = 71.4 bits (174), Expect = 6e-13
Identities = 32/238 (13%), Positives = 55/238 (23%), Gaps = 57/238 (23%)
Query: 941 TPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI-----LEINDVYLRDSGLYTCKATN 995
+ + +T+ W+ + I + L L D+G YTC N
Sbjct: 41 STAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRN 100
Query: 996 KHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPV 1055
+ + L V +K +
Sbjct: 101 TTYCSKVAFPLEVV---------------------------------------QKDSCFN 121
Query: 1056 FTSQLQDNLDVPEAGKVHFDC---RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
+L + E G C S I W+ + V
Sbjct: 122 SPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNNVIPEGM---- 177
Query: 1113 SLDMDYVYARDSGEYICRATNKWG------TAMTKAKVICKAKHDIVTESQLPDSMSA 1164
+L ++G Y C T T KV+ K+ + P+
Sbjct: 178 NLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVV 235
Score = 70.3 bits (171), Expect = 2e-12
Identities = 40/340 (11%), Positives = 72/340 (21%), Gaps = 95/340 (27%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-----TLSINSLRADDSAIYTCKATN 56
L + W+ L I + L +D+ YTC N
Sbjct: 41 STAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRN 100
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLN 116
+ L++ + ++ + +
Sbjct: 101 TTYCSKVAFPLEVVQKD--------SCFNSPMKLPVHKLYIEYGIQRIT----------- 141
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
C + D S + + W+ I + N V
Sbjct: 142 ---CP-----NVDGYFPSS-------------------VKPTITWYMGCYKIQNFNNVIP 174
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVC-----------------QWFVNNKPL---PAGAKFK 216
+ ++G Y C V P P
Sbjct: 175 EGMN----LSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSP 230
Query: 217 TTHDFGYVALDIELMLKTLV---------PFTEWFVNNKPLPAGAKF----------KTT 257
H EL++ V W ++ K +T
Sbjct: 231 NDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTE 290
Query: 258 HDFGYVALDIVGAYAED-SGIYTVKATNSKGSATTSGTLK 296
+ L I +ED Y A ++KG + +K
Sbjct: 291 DETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVK 330
Score = 58.0 bits (139), Expect = 1e-08
Identities = 28/294 (9%), Positives = 68/294 (23%), Gaps = 80/294 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L D G Y C N + + +
Sbjct: 80 VLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPL------EVV------------------- 114
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
+D + K P V ++ + + + + +
Sbjct: 115 ------------QKDSCFNSPMKLP---VHKLYIEYGIQRITCPNVDGY--FPSSVKPTI 157
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
W++ + + N P ++F ++G Y C T G
Sbjct: 158 TWYMGCYKIQNFNNVIPEGMN----LSFLIALISNNGNYTCVVTYPEN-----------G 202
Query: 1520 KPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEP 1579
+ + + ++ + + P + + + + GE
Sbjct: 203 RTFHLTRTL---------TVKVVGSPKNAVPPVI----------HSPNDHVVYEKEPGEE 243
Query: 1580 ARFCTRVT----GYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGKIQERV 1629
V R V W I+G + + + + + + ++
Sbjct: 244 LLIPCTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQI 297
Score = 57.2 bits (137), Expect = 3e-08
Identities = 26/191 (13%), Positives = 43/191 (22%), Gaps = 52/191 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L + G Y C T T+ ++
Sbjct: 178 NLSFLIALISNNGNYTCVVTYPENGRTFHLT------RTLTVKVVG-------------- 217
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQST-KFECQ--LAPVGDPN 1456
P+ PP + E C + + D
Sbjct: 218 ------------------SPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSR 259
Query: 1457 MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW----------VYPED-SGEYLCRATNL 1505
+V W ++GK I + + V ED Y+C A +
Sbjct: 260 NEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSA 319
Query: 1506 YGMDETRAILK 1516
G A +K
Sbjct: 320 KGEVAKAAKVK 330
Score = 55.3 bits (132), Expect = 9e-08
Identities = 36/249 (14%), Positives = 61/249 (24%), Gaps = 75/249 (30%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
+ I W+ + + + LS ++ YTC T
Sbjct: 149 FPSSVKPTITWYMGCYKIQNFNNVIPEGM----NLSFLIALISNNGNYTCVVTYPENGRT 204
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLND---VE 119
T + ++ + PK P I ND E
Sbjct: 205 FHLTRTLT-----------------VKVVGSPK----------NAVPPVIHSPNDHVVYE 237
Query: 120 CKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH--------- 170
+ E + C V + + D +V W +GK
Sbjct: 238 KEPGEELLIPCTV---------------YFSFLMDSRNEVWWTIDGKKPDDITIDVTINE 282
Query: 171 -KNRVKMVSDFGFVVMDIAYVQSHD-SGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDI 228
+ + + ++ I V S D YVC + G VA
Sbjct: 283 SISHSRTEDETRTQILSIKKVTSEDLKRSYVCH--ARSA-------------KGEVAKAA 327
Query: 229 ELMLKTLVP 237
++ K P
Sbjct: 328 KVKQKVPAP 336
Score = 51.0 bits (121), Expect = 2e-06
Identities = 21/251 (8%), Positives = 51/251 (20%), Gaps = 54/251 (21%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILD-----ILYCYEENSGVYECRATNKYGSDVTKA 657
+ W++ + + + ++G Y C N
Sbjct: 50 LIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAF 109
Query: 658 SLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNID 717
L+ +++ L + I +
Sbjct: 110 PLE-------VVQKDSCFNSPMKLPVHKLYI------EYGIQRITCPNVDGY-------- 148
Query: 718 DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDC 777
K + W+ ++ + + L +
Sbjct: 149 ---------------FPSSVKPTITWYMGCYKIQNFNNVI----PEGMNLSFLIALISNN 189
Query: 778 GQYSCRAYNDYGEAVTSAS----MKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCG 833
G Y+C + +KV G + + + H + P +
Sbjct: 190 GNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPND-----HVVYEKEPGEEL 244
Query: 834 QYSCRAYNDYG 844
C Y +
Sbjct: 245 LIPCTVYFSFL 255
Score = 49.5 bits (117), Expect = 7e-06
Identities = 50/358 (13%), Positives = 82/358 (22%), Gaps = 66/358 (18%)
Query: 1056 FTSQLQDNLDVPEAGKVHFDCRL---------EPKSDPTMRIDWFFNGRPFATGSRVKTV 1106
+ + V E C L + + W++ + +
Sbjct: 9 WGLDTMRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFR 68
Query: 1107 YDFGFISLDMDY-----VYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
IS + D D+G Y C N + + K P
Sbjct: 69 LPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNS---PMK 125
Query: 1162 MSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY-DSELSEYQKERANES 1220
+ KL D + + WY + E
Sbjct: 126 LPVHKLYIEYGIQRITCPNVDGYFPSSVKPTIT---------WYMGCYKIQNFNNVIPEG 176
Query: 1221 TELEKHDIVTESQLPDS-------MSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIES 1273
L + + ++ E + T P I
Sbjct: 177 MNL----SFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPND 232
Query: 1274 VTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAF-------LIFNFCLHA 1326
V E EP L + C T +F ++ + +
Sbjct: 233 HVVYEKEP-----------GEELLIPC---TVYFSFLMDSRNEVWWTIDGKKPDDITIDV 278
Query: 1327 VI-----FSHPIFDLGFVSLDIDYVYPEDQG-EYVCRAYNDHGEAFTKATISCKKIPT 1378
I S + L I V ED YVC A + GE A + +K+P
Sbjct: 279 TINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKVK-QKVPA 335
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 103
Score = 95.9 bits (239), Expect = 2e-23
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 7/98 (7%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
A F T+L + E A F C+ P+ TV W L A + + +
Sbjct: 6 SGANCFTEELTNLQVEEKGTAVFTCKTE---HPAATVTWRKGLLELRASGKHQPSQEGLT 62
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
+ L I+ + DS YTC G+A + +L V+GR
Sbjct: 63 LRLTISALEKADSDTYTCDI----GQAQSRAQLLVQGR 96
Score = 95.5 bits (238), Expect = 2e-23
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 5/104 (4%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + FT+++ + E+ A F + P T+ W + + +S Q
Sbjct: 1 GSSGSSGANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQE 59
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQG 1735
L + + DS + G+A+ A L+V+ +R G
Sbjct: 60 GLTLRLTISALEKADSDTYTCDI----GQAQSRAQLLVQGRRSG 99
Score = 89.3 bits (222), Expect = 3e-21
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
F +++ + A F K V W K ++ +++ +E L
Sbjct: 8 ANCFTEELTNLQVEEKGTAVFTCKTEHPAA-TVTWRKGLLELRASGKHQPSQEGLTLRLT 66
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
I DS Y C G+A+ A+L+VQ +++
Sbjct: 67 ISALEKADSDTYTCD----IGQAQSRAQLLVQGRRSG 99
Score = 86.6 bits (215), Expect = 3e-20
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 8/102 (7%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
A FT L+N+ + E A F + P V W ++ + + +
Sbjct: 7 GANCFTEELTNLQ-VEEKGTAVFTCKTE---HPAATVTWRKGLLELRASGKHQPSQEGLT 62
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 806
+ L IS + D Y+C G+A + A + VQG+RS
Sbjct: 63 LRLTISALEKADSDTYTCDI----GQAQSRAQLLVQGRRSGP 100
Score = 76.6 bits (189), Expect = 1e-16
Identities = 14/83 (16%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
FT + +L+ +++ +A F C P V W + + + +
Sbjct: 4 GSSGANCFTEELTNLQ-VEEKGTAVFTCK---TEHPAATVTWRKGLLELRASGKHQPSQE 59
Query: 464 FGFVVMDIAYVQSHDSGEYVCRA 486
+ + I+ ++ DS Y C
Sbjct: 60 GLTLRLTISALEKADSDTYTCDI 82
Score = 71.2 bits (175), Expect = 6e-15
Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
FT +L + L V E G F C+ P + W + + + +
Sbjct: 8 ANCFTEELTN-LQVEEKGTAVFTCKT---EHPAATVTWRKGLLELRASGKHQPSQEGLTL 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + + DS Y C G A ++A+++ + +
Sbjct: 64 RLTISALEKADSDTYTCDI----GQAQSRAQLLVQGR 96
Score = 70.8 bits (174), Expect = 1e-14
Identities = 14/93 (15%), Positives = 28/93 (30%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F L +++ +E F C+ E P V W +
Sbjct: 9 NCFTEELTNLQVEEKGTAVFTCKTE--------------------HPAATVTWRKGLLEL 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + + + + I+ ++ DS Y C
Sbjct: 49 RASGKHQPSQEGLTLRLTISALEKADSDTYTCD 81
Score = 68.9 bits (169), Expect = 4e-14
Identities = 19/104 (18%), Positives = 32/104 (30%), Gaps = 8/104 (7%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
F ++ Q+ E + F C+ P V W L + P
Sbjct: 2 SSGSSGANCFTEELTNL-QVEEKGTAVFTCK---TEHPAATVTWRKGLLELRASGKHQPS 57
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ + + + DS Y C G ++RA L G+
Sbjct: 58 QEGLTLRLTISALEKADSDTYTCDI----GQAQSRAQLLVQGRR 97
Score = 65.8 bits (161), Expect = 6e-13
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P + W K + L + + + + + L+I++L DS YTC G+A S
Sbjct: 33 EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDI----GQAQSR 88
Query: 65 CTLKIEDR 72
L ++ R
Sbjct: 89 AQLLVQGR 96
Score = 59.7 bits (145), Expect = 7e-11
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 7/83 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
NL V E G F C+ P + W + + + + L + +
Sbjct: 17 NLQVEEKGTAVFTCKT---EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKA 73
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
DS Y C G A ++A+++
Sbjct: 74 DSDTYTCDI----GQAQSRAQLL 92
Score = 58.1 bits (141), Expect = 3e-10
Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 16/108 (14%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
F+ + L+NL E A F TV + + AS + +
Sbjct: 9 NCFT---EELTNLQVEEKGTAVFTCK---TEHPAATVTWRKGLLELRASGKHQPSQEGLT 62
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
+ L I + D+ YTC +A++ V +G+ +S
Sbjct: 63 LRLTISALEKADSDTYTCDIGQAQSRAQLLV--------QGRRSGPSS 102
Score = 50.8 bits (122), Expect = 1e-07
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W L A K + + + + L I DS YT G A + L
Sbjct: 37 ATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDI----GQAQSRAQL 91
Score = 50.0 bits (120), Expect = 2e-07
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
V W +L +++ + + L I + +S Y C G ++A L
Sbjct: 39 VTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCDI----GQAQSRAQL 91
Score = 45.8 bits (109), Expect = 5e-06
Identities = 18/124 (14%), Positives = 32/124 (25%), Gaps = 38/124 (30%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRV-------ECSLSTAFFFPFINIS 1314
F E+ ++ V+E F + E P V E S
Sbjct: 6 SGANCFTEELTNLQVEEKGTAVFTCKTE---HPAATVTWRKGLLELRASGKHQP------ 56
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
+ + L I + D Y C G+A ++A + +
Sbjct: 57 ------------------SQEGLTLRLTISALEKADSDTYTCDI----GQAQSRAQLLVQ 94
Query: 1375 KIPT 1378
+
Sbjct: 95 GRRS 98
Score = 44.2 bits (105), Expect = 2e-05
Identities = 9/44 (20%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
A F + +V+E A F + P V W +
Sbjct: 6 SGANCFTEELTNLQVEEKGTAVFTCKTEH-PAATVTWRKGLLEL 48
Score = 41.2 bits (97), Expect = 2e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 861
IS + D Y+C G+A + A + VQG+RS
Sbjct: 66 TISALEKADSDTYTCDI----GQAQSRAQLLVQGRRSGP 100
Score = 36.9 bits (86), Expect = 0.007
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
A E L + V+E C+
Sbjct: 7 GANCFTEELTNLQVEEKGTAVFTCKTEH 34
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain,
cytokine decoy RE virus/viral protein, type-1
interferon, soluble A/B-IFNR; HET: EPE; 2.10A
{Ectromelia virus}
Length = 329
Score = 102 bits (255), Expect = 2e-23
Identities = 39/247 (15%), Positives = 63/247 (25%), Gaps = 27/247 (10%)
Query: 367 VLEILGTKIEDTG-VYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L I D+ Y C T K G + + K PP L D
Sbjct: 90 DLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRK----PPSCIPETYELG-THDKY 144
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCR 485
C + + W+ N + + K ++ I + DSG Y C
Sbjct: 145 GIDLYCGILY-AKHYNNITWYKNNQELIIDGT-KYSQSGQNLI--IHNPELEDSGRYDCY 200
Query: 486 AWNNFIFI---------PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCR--LEPKSDP 534
+ + I + R ++V + C
Sbjct: 201 VHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVD 260
Query: 535 TMRIDWFFNGRPFATG-----SRVKTVYDFGFISLDMDYVYARDSGE-YICRATNKWGTA 588
+ IDW S + + +L + V G Y CR N +
Sbjct: 261 DVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320
Query: 589 MTKAKVI 595
V+
Sbjct: 321 TLTTTVV 327
Score = 96.4 bits (239), Expect = 2e-21
Identities = 38/310 (12%), Positives = 72/310 (23%), Gaps = 49/310 (15%)
Query: 1563 PVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEH- 1621
GEP + + + E + K +++
Sbjct: 30 SCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNG 89
Query: 1622 -----------------------KGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQAR 1658
G + +V KPP + ++
Sbjct: 90 DLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVR--SHIRKPPSCIPETYELGTHDKYGID 147
Query: 1659 FEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 1717
I W++ + + + LI+ +EDSG +
Sbjct: 148 LYCGILYAKHYNNITWYKNNQELIID---GTKYSQSGQNLIIHNPELEDSGRYDCYVHYD 204
Query: 1718 GGKAKCSANLVVEEKRQGGRGGVVPPS----FLTTISSAVINVGQLARFDAKISAT---- 1769
+ K + + V+P L + +G+ A +T
Sbjct: 205 DVRIKNDIVVSRCKILT-----VIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLV 259
Query: 1770 KPLDVYWLKNGKKIIP--DIRYKTLEEDNLF---TLLIIEAVVEDSGA-YECVAMNNAGE 1823
+ + W II Y L TL E G Y C N +
Sbjct: 260 DDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFD 319
Query: 1824 ARCEAELVVQ 1833
+V++
Sbjct: 320 KTLTTTVVLE 329
Score = 93.0 bits (230), Expect = 3e-20
Identities = 32/252 (12%), Positives = 65/252 (25%), Gaps = 30/252 (11%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPIT----SSPDFQIHTFST 1693
P A + + D L + ++ +D + ++
Sbjct: 28 NPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVK 87
Query: 1694 KSILIMRQVFMEDSG-VFAVIAENRGGKA-KCSANLVVEEKRQGGRGGVVPPSFLTTISS 1751
L + DS + + G + + PPS +
Sbjct: 88 NGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHI----------RKPPSCIPETYE 137
Query: 1752 AVINVGQLARFD-AKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDS 1810
+ + A ++ W KN +++I D + L+I +EDS
Sbjct: 138 LGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQ---NLIIHNPELEDS 194
Query: 1811 GAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGS 1870
G Y+C + + + + +QD + NV G
Sbjct: 195 GRYDCYVHYDDVRIKNDIVVSRC---------KILTVIPSQDHRFKLILD-PKINVTIGE 244
Query: 1871 AVTLKCRITGKP 1882
+ C
Sbjct: 245 PANITCTAVSTS 256
Score = 89.9 bits (222), Expect = 3e-19
Identities = 34/252 (13%), Positives = 58/252 (23%), Gaps = 46/252 (18%)
Query: 902 GHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
G + + + K P + +L + C + + W+ N + L
Sbjct: 114 GDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGIL-YAKHYNNITWYKNNQELII 172
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
K L I++ L DSG Y C ++ V
Sbjct: 173 DGT-KYSQSGQ--NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRC------KILTVI 223
Query: 1022 AIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCR--LE 1079
F L ++V + C
Sbjct: 224 ----------------------------PSQDHRFKLILDPKINVTIGEPANITCTAVST 255
Query: 1080 PKSDPTMRIDWFFNGRPFATG-----SRVKTVYDFGFISLDMDYVYARDSGE-YICRATN 1133
+ IDW S + + +L + V G Y CR N
Sbjct: 256 SLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHN 315
Query: 1134 KWGTAMTKAKVI 1145
+ V+
Sbjct: 316 YYFDKTLTTTVV 327
Score = 85.7 bits (211), Expect = 1e-17
Identities = 41/309 (13%), Positives = 85/309 (27%), Gaps = 79/309 (25%)
Query: 530 PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAM 589
+D ++W G+ + +I+ +Y Y+C T K G +
Sbjct: 62 RYNDKDNVVNWEKIGKTRRP-LNRRVKNGDLWIA---NYTSNDSHRRYLCTVTTKNGDCV 117
Query: 590 T--------------------------KAKVICKVL----TVIVEWFYNGKKLPHGHRYR 619
+ C +L + W+ N ++L
Sbjct: 118 QGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKY 177
Query: 620 TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEG 679
+ ++I + E+SG Y+C
Sbjct: 178 SQSGQNLIIHNP---ELEDSGRYDCYVHYDDVRI-------------------------- 208
Query: 680 GLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHF--EARLTPTDDP 737
++ + R + + Q F + L ++ GE A+ A T
Sbjct: 209 --------KNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVD 260
Query: 738 KLKVEWFWNGKPMKTG-----SRFRTFCDFGFVILEISPVYPEDCGQ-YSCRAYNDYGEA 791
+ ++W + S + L V E G Y+CR +N Y +
Sbjct: 261 DVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320
Query: 792 VTSASMKVQ 800
+ ++ ++
Sbjct: 321 TLTTTVVLE 329
Score = 80.3 bits (197), Expect = 6e-16
Identities = 51/336 (15%), Positives = 87/336 (25%), Gaps = 41/336 (12%)
Query: 87 LIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLL 146
+ E K ++ + + + E C +
Sbjct: 8 ITEFFNKMRDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLS------- 60
Query: 147 CTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC------ 200
ND + V W GK NR V + + + + Y+C
Sbjct: 61 ---HRYNDKDNVVNWEKIGKTRRPLNRR--VKNGDLWIANY--TSNDSHRRYLCTVTTKN 113
Query: 201 ----QWFVNNKPLPA-----GAKFKTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAG 251
Q V + THD + L ++ W+ NN+ L
Sbjct: 114 GDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIID 173
Query: 252 AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVN-HNYPLF 310
K + L I EDSG Y + + L V F
Sbjct: 174 GT-KYSQSGQN--LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRF 230
Query: 311 SLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEAS-----HRIRTVHAF 363
L N++ GE A+ A + + +++ I + +
Sbjct: 231 KLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGI 290
Query: 364 GMVVLEILGTKIEDTG-VYTCRATNKWGQAEISVNL 398
L E G YTCR N + ++ +
Sbjct: 291 TEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTV 326
Score = 79.5 bits (195), Expect = 1e-15
Identities = 32/238 (13%), Positives = 67/238 (28%), Gaps = 23/238 (9%)
Query: 265 LDIVGAYAEDSG-IYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEG 323
L I + DS Y T G + + P + + +
Sbjct: 91 LWIANYTSNDSHRRYLCTVTTKNGDCVQG-------IVRSHIRKPPSCIPETYELGTHDK 143
Query: 324 EIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 383
I + + N + + + + L I ++ED+G Y C
Sbjct: 144 YGIDLY-CGILYAKHYNNITWYKNNQELIIDGT-KYSQSGQN--LIIHNPELEDSGRYDC 199
Query: 384 RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLE---GLKDGDSAHFEC--TLTPVND 438
+ + + + P + L+ + G+ A+ C T +
Sbjct: 200 YVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLV 259
Query: 439 PELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMD---IAYVQSHDSGE-YVCRAWNNF 490
++ ++W + I +++ G + V G Y CR N +
Sbjct: 260 DDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYY 317
Score = 77.6 bits (190), Expect = 5e-15
Identities = 43/301 (14%), Positives = 67/301 (22%), Gaps = 81/301 (26%)
Query: 424 GDSAHFECTLTP-------VNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQS 476
G+ +C ND + V W GK NR V + + + +
Sbjct: 44 GEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRR--VKNGDLWIANY--TSN 99
Query: 477 HDSGEYVCRAWN----------NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
Y+C P P L + + C
Sbjct: 100 DSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCI---------PETYELGTHDKYGIDLYC 150
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
+ + I W+ N + Y +L + DSG Y C
Sbjct: 151 GI-LYAKHYNNITWYKNNQELIIDGTK---YSQSGQNLIIHNPELEDSGRYDCYVHYDDV 206
Query: 587 TAMT----------------------------------KAKVICKV-------LTVIVEW 605
A + C V+++W
Sbjct: 207 RIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDW 266
Query: 606 FYNGKKLPHG--HRYRTFHDFGIVILDILYCY---EENSG-VYECRATNKYGSDVTKASL 659
+ Y G + LY EE G Y CR N Y ++
Sbjct: 267 ENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTV 326
Query: 660 K 660
Sbjct: 327 V 327
Score = 77.6 bits (190), Expect = 5e-15
Identities = 42/343 (12%), Positives = 75/343 (21%), Gaps = 108/343 (31%)
Query: 720 REGENAHFEARLTP-------TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPV 772
GE + +D V W GK + +R D L I+
Sbjct: 42 ALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGD-----LWIANY 96
Query: 773 YPEDCG-QYSCRAYNDYGEAVTSA----------------SMKVQGKRSIILE------- 808
D +Y C G+ V + K I L
Sbjct: 97 TSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAK 156
Query: 809 -----------SQLPKGMEVFISFH---EISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
+L + I ED G+Y C + D +
Sbjct: 157 HYNNITWYKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSR 216
Query: 855 QGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLG 914
++I
Sbjct: 217 CKILTVIPSQDHRF---------------------------------------------- 230
Query: 915 KAPEFLTTPTDLTLAESTLAHFECR--LTPTNDPSMTVEWFHNGKALSAG-----SRIKT 967
L + + A+ C T + ++W + + S + +
Sbjct: 231 ----KLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTS 286
Query: 968 INDFGFVILEINDVYLRDSG-LYTCKATNKHGEATTSCKLTVK 1009
L +V G YTC+ N + + T + + ++
Sbjct: 287 SGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVLE 329
Score = 71.4 bits (174), Expect = 5e-13
Identities = 32/381 (8%), Positives = 72/381 (18%), Gaps = 111/381 (29%)
Query: 1254 EIEEDEIPEEPPRFITE------IESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFF 1307
D +P + +++ + EP + C
Sbjct: 13 NKMRDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAK--------------CPPIEDSL 58
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPED-QGEYVCRAYNDHGEAF 1366
++ + L I D Y+C +G+
Sbjct: 59 LSHRYNDKDNVVNWEKIGKTRRPLNRRVKNG-DLWIANYTSNDSHRRYLCTVTTKNGDCV 117
Query: 1367 TKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPR 1426
+++ + ++PP
Sbjct: 118 QGI-----------VRSHI------------------------------------RKPPS 130
Query: 1427 FVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMN 1486
+ + + C + + W+ N + L Y +
Sbjct: 131 CIPETYEL-GTHDKYGIDLYCGILY-AKHYNNITWYKNNQELIIDGTK---YSQSGQNLI 185
Query: 1487 FGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASW 1546
EDSG Y C + ++ +I
Sbjct: 186 IHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVI---------------------- 223
Query: 1547 QHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRP----RVMWLINGHT 1602
++ + V GEPA + W
Sbjct: 224 -----------PSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGW 272
Query: 1603 IVNEIVRKITATETTEMEHKG 1623
I+ + ++ +
Sbjct: 273 IIGLDFGVYSILTSSGGITEA 293
Score = 70.6 bits (172), Expect = 9e-13
Identities = 43/382 (11%), Positives = 82/382 (21%), Gaps = 99/382 (25%)
Query: 1395 LIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAP--- 1451
+I +E I ++ + + P + +C
Sbjct: 1 MIDIENEITEFF-NKMRDTLPAKDSKWLNPSCMFGGTMND-MAALGEPFSAKCPPIEDSL 58
Query: 1452 ----VGDPNMKVEWFLNGKPLPHKNRFNP-----IYDFGYVAMNFGWVYPEDSGE-YLCR 1501
D + V W GK NR I + DS YLC
Sbjct: 59 LSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIAN----------YTSNDSHRRYLCT 108
Query: 1502 ATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKE 1561
T G + ++
Sbjct: 109 VTTKNGDCVQGIVRSH-----------------------------------------IRK 127
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATET---- 1616
P + + + C + + W N ++ + + + +
Sbjct: 128 PPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQNLIIH 187
Query: 1617 -TEMEHKGK----------------IQERVVDASEKPAKPPVFTKKIQP-CRAFEQDQAR 1658
E+E G+ + R + P++ F + P + A
Sbjct: 188 NPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIGEPAN 247
Query: 1659 FEVEFDGDPLP----TIKWFREDFPITSSPDFQIHTFSTK-----SILIMRQVFMEDSG- 1708
L I W I ++ + L V E G
Sbjct: 248 ITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGN 307
Query: 1709 VFAVIAENRGGKAKCSANLVVE 1730
+ N + +V+E
Sbjct: 308 TYTCRGHNYYFDKTLTTTVVLE 329
Score = 70.2 bits (171), Expect = 1e-12
Identities = 29/223 (13%), Positives = 53/223 (23%), Gaps = 56/223 (25%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
A I W+KN L + S L I++ +DS Y C
Sbjct: 153 LYAKHYNNITWYKNNQELIIDGTKYSQSG---QNLIIHNPELEDSGRYDCYVHYDDVRIK 209
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
+ + K + + D + +
Sbjct: 210 NDIVVSRC------------------------KILTVIPSQ---DHRFKLILDPKINVTI 242
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDF 180
E + C T + ++ ++W + I +++
Sbjct: 243 GEPANITCTA---------------VSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSS 287
Query: 181 GFVVMD---IAYVQSHDSGE-YVCQWFVNNKPLPAGAKFKTTH 219
G + V G Y C+ +N K TT
Sbjct: 288 GGITEATLYFENVTEEYIGNTYTCR--GHNY---YFDKTLTTT 325
Score = 69.5 bits (169), Expect = 2e-12
Identities = 37/324 (11%), Positives = 67/324 (20%), Gaps = 94/324 (29%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSI-NSLRADDSAIYTCKATNLLGEAVST 64
D + + W K G + G L I N D Y C T G+ V
Sbjct: 65 DKDNVVNWEKIGKTRR---PLNRRVKNG--DLWIANYTSNDSHRRYLCTVTTKNGDCVQG 119
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
+ P I ++ +
Sbjct: 120 IVRSH-----------------------------------IRKPPSCIPETYELGTHDKY 144
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
+ C + + W+ N + + K ++
Sbjct: 145 GIDLYCGI------------------LYAKHYNNITWYKNNQELIIDGT-KYSQSGQNLI 185
Query: 185 MDIAYVQSHDSGEYVCQWFVNN-----------------KPLPAGAKFKTTHDFGYVALD 227
I + DSG Y C ++ P V +
Sbjct: 186 --IHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLILDPKINVTIG 243
Query: 228 IELMLK---------TLVPFTEWFVNNKPLPAG-----AKFKTTHDFGYVALDIVGAYAE 273
+ +W + + + ++ L E
Sbjct: 244 EPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEE 303
Query: 274 DSG-IYTVKATNSKGSATTSGTLK 296
G YT + N T + T+
Sbjct: 304 YIGNTYTCRGHNYYFDKTLTTTVV 327
Score = 67.2 bits (163), Expect = 1e-11
Identities = 32/220 (14%), Positives = 50/220 (22%), Gaps = 61/220 (27%)
Query: 934 AHFECRLTP-------TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDS 986
+C ND V W GK + N L I + DS
Sbjct: 47 FSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRR-PLNRRVKNG----DLWIANYTSNDS 101
Query: 987 G-LYTCKATNKHGEATTSC-KLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDEL 1044
Y C T K+G+ + ++
Sbjct: 102 HRRYLCTVTTKNGDCVQGIVRSHIR----------------------------------- 126
Query: 1045 IPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK 1104
PP + + L + + C + + I W+ N +
Sbjct: 127 -------KPPSCIPETYE-LGTHDKYGIDLYCGI-LYAKHYNNITWYKNNQELIIDGTK- 176
Query: 1105 TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
Y +L + DSG Y C V
Sbjct: 177 --YSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVV 214
Score = 59.1 bits (142), Expect = 5e-09
Identities = 25/205 (12%), Positives = 46/205 (22%), Gaps = 50/205 (24%)
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+V W GK +R + + I + ++ Y C T K G V
Sbjct: 69 VVNWEKIGKTRRPLNR--RVKNGDLWIANYTS--NDSHRRYLCTVTTKNGDCVQG----- 119
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
R+ P + +
Sbjct: 120 ------------------------------------IVRSHIRKPPSCIPETYELG-THD 142
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYS 781
+ + W+ N + + + L I ED G+Y
Sbjct: 143 KYGIDLYCGIL-YAKHYNNITWYKNNQELIIDGTKYSQ---SGQNLIIHNPELEDSGRYD 198
Query: 782 CRAYNDYGEAVTSASMKVQGKRSII 806
C + D + ++I
Sbjct: 199 CYVHYDDVRIKNDIVVSRCKILTVI 223
Score = 55.6 bits (133), Expect = 7e-08
Identities = 26/185 (14%), Positives = 43/185 (23%), Gaps = 48/185 (25%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L I ED G Y C + D +S KI T+
Sbjct: 183 NLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTV-------------------- 222
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLA--PVGDPNM 1457
Q RF + + + + C + ++
Sbjct: 223 --------------------IPSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDV 262
Query: 1458 KVEWFLNGKPLPHKNR-----FNPIYDFGYVAMNFGWVYPEDSGE-YLCRATNLYGMDET 1511
++W + + + F V E G Y CR N Y
Sbjct: 263 LIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTL 322
Query: 1512 RAILK 1516
+
Sbjct: 323 TTTVV 327
Score = 51.8 bits (123), Expect = 1e-06
Identities = 13/75 (17%), Positives = 26/75 (34%), Gaps = 6/75 (8%)
Query: 2 EPRADPNLKIEWFKNGVPLSLG-----SRIRSTFDFGLVTLSINSLRADDS-AIYTCKAT 55
++ I+W + S + S+ TL ++ + YTC+
Sbjct: 255 TSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGH 314
Query: 56 NLLGEAVSTCTLKIE 70
N + T T+ +E
Sbjct: 315 NYYFDKTLTTTVVLE 329
Score = 40.6 bits (94), Expect = 0.004
Identities = 41/355 (11%), Positives = 84/355 (23%), Gaps = 66/355 (18%)
Query: 1040 RKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKS-------DPTMRIDWFF 1092
+D L + K P N C S D ++W
Sbjct: 15 MRDTLPAKDSKWLNPSCMFGGTMNDMAALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEK 74
Query: 1093 NGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK-AKVICKAKHD 1151
G+ + +I+ +Y Y+C T K G + + +
Sbjct: 75 IGKTRRP-LNRRVKNGDLWIA---NYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPS 130
Query: 1152 IVTESQ---LPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWY--D 1206
+ E+ D + + I WY +
Sbjct: 131 CIPETYELGTHDKYGIDLYCGILYAKHYNNIT-----------------------WYKNN 167
Query: 1207 SELSEYQKERANESTELEKHDIVTESQLPDS-----MSAEKLKELEKNYTPEEIEEDEI- 1260
EL + + L H+ E DS ++ + + +
Sbjct: 168 QELIIDGTKYSQSGQNLIIHNPELE----DSGRYDCYVHYDDVRIKNDIVVSRCKILTVI 223
Query: 1261 -PEEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFINISTAF 1317
++ + + V EP + + ++ + +
Sbjct: 224 PSQDHRFKLILDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLDF----- 278
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGE-YVCRAYNDHGEAFTKATI 1371
+ +L + V E G Y CR +N + + T+
Sbjct: 279 -------GVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTV 326
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P
structural and functional analyses, riken structural
genomics/proteomics initiative; NMR {Homo sapiens}
Length = 113
Score = 95.9 bits (239), Expect = 2e-23
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 15/123 (12%)
Query: 1716 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVY 1775
+ G + SA L V +P F + + G A ++S K V
Sbjct: 2 SSGSSGRTSAMLTVRA---------LPIKFTEGLRNEEATEGATAVLRCELS--KMAPVE 50
Query: 1776 WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
W K + + R+ ++ L I V ED+G Y C+ G+ R A L V++
Sbjct: 51 WWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCM----CGKERTSAMLTVRAM 106
Query: 1836 KAP 1838
+
Sbjct: 107 PSG 109
Score = 89.7 bits (223), Expect = 3e-21
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 8/99 (8%)
Query: 913 LGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFG 972
+F + E A C L+ VEW+ + L G R D
Sbjct: 16 RALPIKFTEGLRNEEATEGATAVLRCELSK--MA--PVEWWKGHETLRDGDRHSLRQDGA 71
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L+I + D+G Y C G+ TS LTV+
Sbjct: 72 RCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAM 106
Score = 84.0 bits (208), Expect = 3e-19
Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
A P FT+ ++ A E A E ++W++ + + +
Sbjct: 17 ALPIKFTEGLRNEEATEGATAVLRCELSKMA--PVEWWKGHETLRDGDRHSLRQDGARCE 74
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L +R + ED+G + + GK + SA L V
Sbjct: 75 LQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAM 106
Score = 75.9 bits (187), Expect = 2e-16
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 9/97 (9%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
FT L N + EG A L+ VEW+ + ++ G R D
Sbjct: 19 PIKFTEGLRNEE-ATEGATAVLRCELSK--MAP--VEWWKGHETLRDGDRHSLRQDGARC 73
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L+I + ED G+Y C G+ TSA + V+
Sbjct: 74 ELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAM 106
Score = 70.9 bits (174), Expect = 1e-14
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 9/97 (9%)
Query: 390 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG 449
S L + P KFT +++ E +G +A C L+ VEW+
Sbjct: 5 SSGRTSAMLTV----RALPIKFTEGLRNEE-ATEGATAVLRCELSK--MAP--VEWWKGH 55
Query: 450 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 486
+ + +R + D + I + + D+GEY+C
Sbjct: 56 ETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC 92
Score = 65.1 bits (159), Expect = 2e-12
Identities = 27/132 (20%), Positives = 40/132 (30%), Gaps = 23/132 (17%)
Query: 284 NSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMT 341
+S S TS L F+ + L N EG A L +
Sbjct: 2 SSGSSGRTSAMLTVRALP------IKFT---EGLRNEEATEGATAVLRCELSKMA----P 48
Query: 342 VEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 401
VE+ + + R L+I G ED G Y C + A ++V
Sbjct: 49 VEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMCGKERTSAMLTV----- 103
Query: 402 DKSKGQPPKFTS 413
+ P +S
Sbjct: 104 ---RAMPSGPSS 112
Score = 64.7 bits (158), Expect = 2e-12
Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 21/93 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F L + E E C + VEW+ + +
Sbjct: 20 IKFTEGLRNEEATEGATAVLRCELSK-------------------MAP--VEWWKGHETL 58
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+R + D + I + + D+GEY+C
Sbjct: 59 RDGDRHSLRQDGARCELQIRGLVAEDAGEYLCM 91
Score = 64.3 bits (157), Expect = 2e-12
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 9/97 (9%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P FT L++ + E C L ++W+ G R D
Sbjct: 19 PIKFTEGLRN-EEATEGATAVLRCELSK--MAP--VEWWKGHETLRDGDRHSLRQDGARC 73
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + + A D+GEY+C G T A + +A
Sbjct: 74 ELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAM 106
Score = 63.2 bits (154), Expect = 6e-12
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+EW+K L G R D L I L A+D+ Y C G+ +
Sbjct: 42 ELSKMAPVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERT 97
Query: 64 TCTLKIEDR 72
+ L +
Sbjct: 98 SAMLTVRAM 106
Score = 59.3 bits (144), Expect = 1e-10
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 11/102 (10%)
Query: 1421 KKQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
+ P +F ++ ++ E + C+L+ VEW+ + L +R + D
Sbjct: 16 RALPIKFTEGLR--NEEATEGATAVLRCELS--KMA--PVEWWKGHETLRDGDRHSLRQD 69
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ + ED+GEYLC G + T A+L P
Sbjct: 70 GARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTVRAMP 107
Score = 54.3 bits (131), Expect = 7e-09
Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 8/87 (9%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
N + E C L ++W+ G R D L + + A
Sbjct: 28 NEEATEGATAVLRCELSK--MAP--VEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAE 83
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVL 599
D+GEY+C G T A + + +
Sbjct: 84 DAGEYLCMC----GKERTSAMLTVRAM 106
Score = 50.4 bits (121), Expect = 2e-07
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
EW+ ++ L G + D L I G AED+G Y + SA
Sbjct: 50 EWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMCGKERTSAM 100
Score = 50.1 bits (120), Expect = 3e-07
Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
VEW+ + L G R+ D L I E++G Y C G + T A L
Sbjct: 49 VEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAML 101
Score = 49.7 bits (119), Expect = 3e-07
Identities = 16/125 (12%), Positives = 30/125 (24%), Gaps = 35/125 (28%)
Query: 1259 EIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFINI 1313
+ P +F + + E + +
Sbjct: 14 TVRALPIKFTEGLRNEEATEGATAVLRCELSK--MAPVEWWKGHETLRDGDRHSL----- 66
Query: 1314 STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISC 1373
D L I + ED GEY+C G+ T A ++
Sbjct: 67 -------------------RQDGARCELQIRGLVAEDAGEYLCMC----GKERTSAMLTV 103
Query: 1374 KKIPT 1378
+ +P+
Sbjct: 104 RAMPS 108
Score = 49.7 bits (119), Expect = 3e-07
Identities = 10/64 (15%), Positives = 21/64 (32%), Gaps = 18/64 (28%)
Query: 1819 NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRI 1878
++ R A L V++ E L+++ EG+ L+C +
Sbjct: 2 SSGSSGRTSAMLTVRAL------------------PIKFTEGLRNEEATEGATAVLRCEL 43
Query: 1879 TGKP 1882
+
Sbjct: 44 SKMA 47
Score = 40.0 bits (94), Expect = 8e-04
Identities = 7/65 (10%), Positives = 14/65 (21%), Gaps = 10/65 (15%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEH 1621
F ++ EG A ++ V W + + +
Sbjct: 19 PIKFTEGLRNEEATEGATAVLRCELSK--MAPVEWWKGH--------ETLRDGDRHSLRQ 68
Query: 1622 KGKIQ 1626
G
Sbjct: 69 DGARC 73
Score = 37.7 bits (88), Expect = 0.006
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+I + ED G+Y C G+ TSA + V+
Sbjct: 76 QIRGLVAEDAGEYLCMC----GKERTSAMLTVRAM 106
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein
complex, growth factor-receptor complex, TRA hormone
complex; HET: NDG NAG; 2.30A {Homo sapiens}
Length = 289
Score = 101 bits (252), Expect = 2e-23
Identities = 34/269 (12%), Positives = 68/269 (25%), Gaps = 26/269 (9%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
V + + F VL + DTG Y C + G
Sbjct: 27 PVVWERMSQEPPQEMAKAQDGTFS-SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLY 85
Query: 401 VD-KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 459
+ + L + C V DP+L V + +
Sbjct: 86 IFVPDPTVGFLPNDAEELFIFLTEITEITIPC---RVTDPQLVVTLHEKKGDV----ALP 138
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSP----SQDNLD 515
+ D + + Y+C+ + +++++ S +
Sbjct: 139 VPYDHQ-----RGFSGIFEDRSYICKTTIG-DREVDSDAYYVYRLQVSSINVSVNAVQTV 192
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNG----RPFATGSRVKTVYDFGFIS-LDMDYVY 570
V + + C + + +W + R + + S L +
Sbjct: 193 VRQGENITLMC--IVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAE 250
Query: 571 ARDSGEYICRATNKWGTAMTKAKVICKVL 599
DSG Y C T + + V+
Sbjct: 251 LEDSGTYTCNVTESVNDHQDEKAINITVV 279
Score = 91.7 bits (227), Expect = 5e-20
Identities = 43/283 (15%), Positives = 79/283 (27%), Gaps = 70/283 (24%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
+ C+ + V W + + F V+ + + D+GEY
Sbjct: 15 SSTFVLTCSGSA------PVVWERMSQEPPQEMAKAQDGTFSSVLT-LTNLTGLDTGEYF 67
Query: 484 CRAWNN-----------FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKS 532
C ++ +IF+P + + + + E ++ CR+ +
Sbjct: 68 CTHNDSRGLETDERKRLYIFVPDPTVGFLPN----DAEELFIFLTEITEITIPCRV---T 120
Query: 533 DPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 592
DP + + V + GF + + YIC+ T + A
Sbjct: 121 DPQLVVTLHEKKGD--VALPVPYDHQRGFSGIF-------EDRSYICKTTIGDREVDSDA 171
Query: 593 KVI----------------------------CKVL---TVIVEWFYNGKKLPHGHRYRTF 621
+ C V+ V EW Y K+ T
Sbjct: 172 YYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLVEPVTD 231
Query: 622 HDFGIV-----ILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ IL I E+SG Y C T + ++
Sbjct: 232 FLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAI 274
Score = 85.9 bits (212), Expect = 4e-18
Identities = 37/258 (14%), Positives = 72/258 (27%), Gaps = 28/258 (10%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W ++ P F V L + D+G Y +S+G T
Sbjct: 29 VWERMSQEPPQEMAKAQDGTFSSV-LTLTNLTGLDTGEYFCTHNDSRGLETDERKRL--- 84
Query: 300 RLFVNHNYPLF--SLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI 357
+FV F + + L+E V D + V +
Sbjct: 85 YIFVPDPTVGFLPNDAEELFIFLTEITEITIPCR---VTDPQLVVTLHEKKGDVALPVPY 141
Query: 358 RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKS 417
F + I + Y C+ T + + V + + + +
Sbjct: 142 DHQRGF---------SGIFEDRSYICKTTIGDREVDSDAYY--VYRLQVSSINVSVNAVQ 190
Query: 418 LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH--KNRVKMVSDFGFVVMD---IA 472
++ G++ C + + + EW + K + + D + + I
Sbjct: 191 TV-VRQGENITLMCIVI--GNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIP 247
Query: 473 YVQSHDSGEYVCRAWNNF 490
+ DSG Y C +
Sbjct: 248 SAELEDSGTYTCNVTESV 265
Score = 83.2 bits (205), Expect = 4e-17
Identities = 40/332 (12%), Positives = 71/332 (21%), Gaps = 97/332 (29%)
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
+P L + + C + W + F + L +
Sbjct: 4 TPPGPELVLNVSSTFVLTCSGSAP------VVWERMSQEPPQEMAKAQDGTFSSV-LTLT 56
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI-------------------------------- 595
+ D+GEY C + G + K +
Sbjct: 57 NLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIP 116
Query: 596 CKVL--TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
C+V ++V + Y H G + Y C+ T
Sbjct: 117 CRVTDPQLVVTLHEKKGDVALPVPYD--HQRGFSGI-------FEDRSYICKTTIGDREV 167
Query: 654 VTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPL 713
+ A + +V
Sbjct: 168 DSDAYYVYR---------------------------------------LQVSSINVSVNA 188
Query: 714 SNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV-----ILE 768
+R+GEN + + EW + K T IL
Sbjct: 189 VQTV-VRQGENITLMC--IVIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILH 245
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
I ED G Y+C + ++ +
Sbjct: 246 IPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277
Score = 80.9 bits (199), Expect = 2e-16
Identities = 42/309 (13%), Positives = 74/309 (23%), Gaps = 61/309 (19%)
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
L + V W + F V L ++ + D G
Sbjct: 12 LNVSSTFVLTCSGSAP------VVWERMSQEPPQEMAKAQDGTFSSV-LTLTNLTGLDTG 64
Query: 779 QYSCRAYNDYGEAVTSASM---KVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQY 835
+Y C + G V L + E+FI EI+ +
Sbjct: 65 EYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAE---ELFIFLTEITEI------TI 115
Query: 836 SCRAYNDYGEAVTSASMKVQ-----GKRSIILESQLPKGMEGTIDK-----IAELEGYGH 885
CR VT + V G ++ + +G G + +
Sbjct: 116 PCR--------VTDPQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREV 167
Query: 886 EREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTND 945
+ + + ++ + + + C +
Sbjct: 168 DSDAYYVYRLQ-----------------VSSINVSVNAVQTVVRQGENITLMC--IVIGN 208
Query: 946 PSMTVEWFHNGKALSAGSRIKTINDFGFV-----ILEINDVYLRDSGLYTCKATNKHGEA 1000
+ EW + K T IL I L DSG YTC T +
Sbjct: 209 EVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH 268
Query: 1001 TTSCKLTVK 1009
+ +
Sbjct: 269 QDEKAINIT 277
Score = 80.1 bits (197), Expect = 4e-16
Identities = 20/173 (11%), Positives = 47/173 (27%), Gaps = 21/173 (12%)
Query: 1666 DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 1725
DP + + + + + + + + + A
Sbjct: 121 DPQLVVTLHEKKGDVALP----VPYDHQRGFSGI-----FEDRSYICKTTIGDREVDSDA 171
Query: 1726 NLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIP 1785
V + V + V+ G+ + + ++ W K+
Sbjct: 172 YYVYRLQ-------VSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGR 224
Query: 1786 DIRYKTLEEDNLF-----TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ T ++ L I A +EDSG Y C + + + E + +
Sbjct: 225 LVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277
Score = 71.3 bits (174), Expect = 4e-13
Identities = 44/324 (13%), Positives = 76/324 (23%), Gaps = 88/324 (27%)
Query: 10 KIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC-TLK 68
+ W + F L++ +L D+ Y C + G L
Sbjct: 27 PVVWERMSQEPPQEMAKAQDGTFSS-VLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLY 85
Query: 69 IEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHF 128
I + D E +F E +
Sbjct: 86 I-----------------FVPDPTVGFLPNDAEELFIFL-------------TEITEITI 115
Query: 129 DCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIA 188
CRV DP+L V + + + D
Sbjct: 116 PCRVT--------------------DPQLVVTLHEKKGDV----ALPVPYDHQ-----RG 146
Query: 189 YVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV------------ 236
+ + Y+C+ + + ++++ + V
Sbjct: 147 FSGIFEDRSYICK--TTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCI 204
Query: 237 ------PFTEWFVNNKPLPAGAKFKTTH--DFGYVA---LDIVGAYAEDSGIYTVKATNS 285
EW K + T D Y L I A EDSG YT T S
Sbjct: 205 VIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTES 264
Query: 286 KG--SATTSGTLKCLERLFVNHNY 307
+ + +E +H++
Sbjct: 265 VNDHQDEKAINITVVESGHHHHHH 288
Score = 70.1 bits (171), Expect = 1e-12
Identities = 33/307 (10%), Positives = 66/307 (21%), Gaps = 64/307 (20%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
+ C + V W + P + F V + + D+GEY C
Sbjct: 16 STFVLTCS------GSAPVVWERMSQEPPQEMAKAQDGTFSSV-LTLTNLTGLDTGEYFC 68
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
+ G++ I+
Sbjct: 69 THNDSRGLETDERKRLY------IFV-------------------------------PDP 91
Query: 1561 EAPVFVSQPEAQKVQ--EGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
+ E + E C RVT P+ V + + +
Sbjct: 92 TVGFLPNDAEELFIFLTEITEITIPC-RVTD-PQLVVTLHEKKGDVALPVPYDHQRGFSG 149
Query: 1618 EMEH----------KGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDP 1667
E ++ + + + G+
Sbjct: 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNE 209
Query: 1668 LPTIKWFRED----FPITSSPDFQIHTFSTK-SILIMRQVFMEDSGVFAVIAENRGGKAK 1722
+ +W + DF + SIL + +EDSG + +
Sbjct: 210 VVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQ 269
Query: 1723 CSANLVV 1729
+ +
Sbjct: 270 DEKAINI 276
Score = 69.7 bits (170), Expect = 1e-12
Identities = 33/241 (13%), Positives = 60/241 (24%), Gaps = 55/241 (22%)
Query: 924 TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYL 983
+L L S+ C S V W + F V L + ++
Sbjct: 8 PELVLNVSSTFVLTCS------GSAPVVWERMSQEPPQEMAKAQDGTFSSV-LTLTNLTG 60
Query: 984 RDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDE 1043
D+G Y C + G T K I V
Sbjct: 61 LDTGEYFCTHNDSRGLETDERKRLY-----IFVPD------------------------- 90
Query: 1044 LIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 1103
+ + + + E ++ CR+ +DP + + V
Sbjct: 91 ------PTVGFLPNDAEELFIFLTEITEITIPCRV---TDPQLVVTLHEKKGD--VALPV 139
Query: 1104 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMS 1163
+ GF + + YIC+ T + A + + + + S
Sbjct: 140 PYDHQRGFSGIF-------EDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTV 192
Query: 1164 A 1164
Sbjct: 193 V 193
Score = 69.0 bits (168), Expect = 2e-12
Identities = 28/285 (9%), Positives = 54/285 (18%), Gaps = 95/285 (33%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L + + D GEY C + G +
Sbjct: 52 VLTLTNLTGLDTGEYFCTHNDSRGLETDERK----------------------------- 82
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
+Y+ + P+ + L E+ C+ V DP + V
Sbjct: 83 --------RLYI-----FVPDPTVGFLPNDAEELFIFLTEITEITIPCR---VTDPQLVV 126
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
+ ++ G+ + Y+C+ T ++ A
Sbjct: 127 TLHEKKGDVALPVPYDH---------QRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRL 177
Query: 1520 KPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEP 1579
+ V++GE
Sbjct: 178 QVSS---------------------------------------INVSVNAVQTVVRQGEN 198
Query: 1580 ARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKG 1623
C V G W + +
Sbjct: 199 ITLMCI-VIGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRS 242
Score = 68.6 bits (167), Expect = 2e-12
Identities = 29/229 (12%), Positives = 50/229 (21%), Gaps = 59/229 (25%)
Query: 921 TTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEIND 980
+ L E T CR+T DP + V + + GF +
Sbjct: 100 AEELFIFLTEITEITIPCRVT---DPQLVVTLHEKKG--DVALPVPYDHQRGFSGIF--- 151
Query: 981 VYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYR 1040
+ Y CK T E + +
Sbjct: 152 ----EDRSYICKTTIGDREVDSDAYYVYR------------------------------- 176
Query: 1041 KDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG----RP 1096
+ S V + + C + + +W + R
Sbjct: 177 ---------LQVSSINVSVNAVQTVVRQGENITLMC--IVIGNEVVNFEWTYPRKESGRL 225
Query: 1097 FATGSRVKTVYDFGFIS-LDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ + S L + DSG Y C T + +
Sbjct: 226 VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAI 274
Score = 66.6 bits (162), Expect = 1e-11
Identities = 35/299 (11%), Positives = 62/299 (20%), Gaps = 95/299 (31%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
V W ++ P F V L + ++G Y C + G + +
Sbjct: 28 VVWERMSQEPPQEMAKAQDGTFSSV-LTLTNLTGLDTGEYFCTHNDSRGLETDERKR--- 83
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
L + P + L E
Sbjct: 84 ----LYIFVPDP-----------------------------TVGFLPNDAEELFIFLTEI 110
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
R+T DP+L V + + + + Y C
Sbjct: 111 TEITIPCRVT---DPQLVVTLHEKKGDVALPVPYD---------HQRGFSGIFEDRSYIC 158
Query: 783 RAYNDYGEAVTSASMKVQGKRSIILESQLPK------GMEVFI----------------- 819
+ E + A + + S I S G + +
Sbjct: 159 KTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYP 218
Query: 820 -----------------------SFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
S I ED G Y+C + ++ +
Sbjct: 219 RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINIT 277
Score = 65.1 bits (158), Expect = 3e-11
Identities = 28/221 (12%), Positives = 58/221 (26%), Gaps = 42/221 (19%)
Query: 1669 PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 1728
+ W R + + S+L + + D+G + + G +
Sbjct: 26 APVVWERMSQEP-PQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRL 84
Query: 1729 ---VEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS--ATKP-LDVYWLKNGKK 1782
V + G F+ + + I T P L V +
Sbjct: 85 YIFVPDPTVGFLPNDAEELFIF------LTEIT----EITIPCRVTDPQLVVTLHEKKGD 134
Query: 1783 IIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQA 1842
+ + Y + + + +Y C E +A V + + +
Sbjct: 135 VALPVPY---------DHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSS---- 181
Query: 1843 PAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
V+ V++G +TL C + G
Sbjct: 182 ------------INVSVNAVQTVVRQGENITLMCIVIGNEV 210
Score = 64.3 bits (156), Expect = 6e-11
Identities = 37/307 (12%), Positives = 69/307 (22%), Gaps = 72/307 (23%)
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
+ C V W + + F
Sbjct: 13 NVSSTFVLTCSGSAP-----------------------VVWERMSQEPPQEMAKAQDGTF 49
Query: 181 GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE 240
V+ + + D+GEY C N+ + K + +V L
Sbjct: 50 SSVLT-LTNLTGLDTGEYFCT--HNDSRGLETDERKRLYI--FVPDPTVGFLPNDAEELF 104
Query: 241 -----------------------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
+ + F + +
Sbjct: 105 IFLTEITEITIPCRVTDPQLVVTLHEKKGDVALPVPYDHQRGF---------SGIFEDRS 155
Query: 278 YTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGD 337
Y K T + + + S+ + +GE +I G+
Sbjct: 156 YICKTTIGDREVDSDAYYV----YRLQVSSINVSVNAVQTV-VRQGENITLMCIVI--GN 208
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMV-----VLEILGTKIEDTGVYTCRATNKWGQA 392
+ + E+ Y K T M +L I ++ED+G YTC T
Sbjct: 209 EVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH 268
Query: 393 EISVNLE 399
+ +
Sbjct: 269 QDEKAIN 275
Score = 50.1 bits (119), Expect = 3e-06
Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 5/71 (7%)
Query: 4 RADPNLKIEWFKNG--VPLSLGSRIRSTFDFGLV---TLSINSLRADDSAIYTCKATNLL 58
+ + EW + D L I S +DS YTC T +
Sbjct: 206 IGNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESV 265
Query: 59 GEAVSTCTLKI 69
+ + I
Sbjct: 266 NDHQDEKAINI 276
Score = 49.3 bits (117), Expect = 6e-06
Identities = 20/176 (11%), Positives = 41/176 (23%), Gaps = 53/176 (30%)
Query: 1345 YVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKK 1404
+ + Y+C+ E + A +
Sbjct: 147 FSGIFEDRSYICKTTIGDREVDSDA---------YYVYRLQV------------------ 179
Query: 1405 YTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLN 1464
V+ Q + + ++ C + G+ + EW
Sbjct: 180 -------------------SSINVSVNAVQTVVRQGENITLMCIVI--GNEVVNFEWTYP 218
Query: 1465 GKPLPH--KNRFNPIYDFGYVA---MNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
K + + + D Y ++ EDSG Y C T + +
Sbjct: 219 RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAI 274
Score = 48.2 bits (114), Expect = 1e-05
Identities = 28/233 (12%), Positives = 47/233 (20%), Gaps = 77/233 (33%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
DP L + + ++L + Y CK T E S
Sbjct: 121 DPQLVVTLHEKKGDVALPVPYDH---------QRGFSGIFEDRSYICKTTIGDREVDSDA 171
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
L S + ++ EN
Sbjct: 172 YYVY---------------------------------RLQVSSINVSVNAVQTVVRQGEN 198
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH--KNRVKMVSDFGFV 183
+ C V + + EW + K + + D +
Sbjct: 199 ITLMCIVI-------------------GNEVVNFEWTYPRKESGRLVEPVTDFLLDMPYH 239
Query: 184 VMD---IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT------HDFGYVALD 227
+ I + DSG Y C V + G+
Sbjct: 240 IRSILHIPSAELEDSGTYTCN--VTE---SVNDHQDEKAINITVVESGHHHHH 287
Score = 40.8 bits (95), Expect = 0.003
Identities = 12/85 (14%), Positives = 23/85 (27%), Gaps = 7/85 (8%)
Query: 1061 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 1120
L + + C + W + F + L + +
Sbjct: 7 GPELVLNVSSTFVLTCSGSAP------VVWERMSQEPPQEMAKAQDGTFSSV-LTLTNLT 59
Query: 1121 ARDSGEYICRATNKWGTAMTKAKVI 1145
D+GEY C + G + K +
Sbjct: 60 GLDTGEYFCTHNDSRGLETDERKRL 84
Score = 38.5 bits (89), Expect = 0.017
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
L I ED G Y C + + I+
Sbjct: 243 ILHIPSAELEDSGTYTCNVTESVNDHQDEKAIN 275
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system;
HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Length = 262
Score = 100 bits (250), Expect = 3e-23
Identities = 47/255 (18%), Positives = 70/255 (27%), Gaps = 49/255 (19%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
T+WF+N + I A DSG Y + S S
Sbjct: 34 TQWFLNGTATQTSTP----------SYRITSASVNDSGEYRCQRGLSGRSDP-------- 75
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+ + + LQ +EGE V + NGK + H
Sbjct: 76 --IQLEIHRGWLLLQVSS-RVFTEGEPLALRCH-AWKDKLVYNVLYYRNGKAFKFFHWNS 131
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSL 418
L IL T I G Y C K +++ V K P +
Sbjct: 132 N--------LTILKTNISHNGTYHCSGMGKHRYTSAGISVT-V---KELFPAPVLNASVT 179
Query: 419 EGLKDGDSAHFEC--TLTPVN-DPELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMDIAY 473
L +G+ C L +L ++ K + + + I
Sbjct: 180 SPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSS----------EYQILT 229
Query: 474 VQSHDSGEYVCRAWN 488
+ DSG Y C A
Sbjct: 230 ARREDSGLYWCEAAT 244
Score = 97.3 bits (242), Expect = 3e-22
Identities = 41/292 (14%), Positives = 80/292 (27%), Gaps = 56/292 (19%)
Query: 322 EGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTG 379
+ E E +P + + ++ NG + S I + D+G
Sbjct: 15 QEETVTLHCEVLHLP---GSSSTQWFLNGTATQTSTP----------SYRITSASVNDSG 61
Query: 380 VYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP 439
Y C+ I + + + S +G+ C +
Sbjct: 62 EYRCQRGLSGRSDPIQLEI--------HRGWLLLQVSSRV-FTEGEPLALRCH-AWKDKL 111
Query: 440 ELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFP 497
V ++ NGK FH N + I +G Y C +
Sbjct: 112 VYNVLYYRNGKAFKFFHWNSN----------LTILKTNISHNGTYHCSGMGKHRYTSA-G 160
Query: 498 IFIFHQIRLPSP---SQDNLDVPEAGKVHFDCRLE---PKSDPTMRIDWFFNGRPFATGS 551
I + + P+P + + E V C + + + ++ + +
Sbjct: 161 ISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRN 220
Query: 552 RVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+ DSG Y C A + G + ++ L + V
Sbjct: 221 TSSE--------YQILTARREDSGLYWCEAATEDGNVLKRS----PELELQV 260
Score = 94.6 bits (235), Expect = 3e-21
Identities = 44/286 (15%), Positives = 80/286 (27%), Gaps = 41/286 (14%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNE----IVRKITATET 1616
V QP V + E C V P W +NG + + ++
Sbjct: 2 AVITLQPPWVSVFQEETVTLHC-EVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDS 60
Query: 1617 TEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWFR 1675
E + + R D + ++ E + D + + ++R
Sbjct: 61 GEYRCQRGLSGRS-DPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYR 119
Query: 1676 EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQG 1735
S L + + + +G + + ++ V+E
Sbjct: 120 NGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKE---- 167
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARF--DAKISATKP---LDVYWLKNGKKIIPDIRYK 1790
+ P L ++ + G L + K+ +P L + K +
Sbjct: 168 ----LFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSS 223
Query: 1791 TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEAR---CEAELVVQ 1833
+ I+ A EDSG Y C A G E EL V
Sbjct: 224 EYQ--------ILTARREDSGLYWCEAATEDGNVLKRSPELELQVL 261
Score = 90.7 bits (225), Expect = 6e-20
Identities = 45/272 (16%), Positives = 72/272 (26%), Gaps = 67/272 (24%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
++ C + + +WF NG I +DSGEY
Sbjct: 16 EETVTLHCEVLHLPGSS-STQWFLNGTATQTSTPS----------YRITSASVNDSGEYR 64
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 543
C+ P + I L S E + C K + ++ N
Sbjct: 65 CQR-GLSGRSDPIQLEIHRGWLLLQVSSRV--FTEGEPLALRCHA-WKDKLVYNVLYYRN 120
Query: 544 GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVL---- 599
G+ F L + +G Y C K V K L
Sbjct: 121 GKAFKFFHWNSN--------LTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAP 172
Query: 600 -------TVIVE------------------------WFYNGKKLPHGHRYRTFHDFGIVI 628
+ ++E ++ K L + + I
Sbjct: 173 VLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSEYQ-----I 227
Query: 629 LDILYCYEENSGVYECRATNKYGSDVTKASLK 660
L E+SG+Y C A + G+ V K S +
Sbjct: 228 LTAR---REDSGLYWCEAATEDGN-VLKRSPE 255
Score = 87.3 bits (216), Expect = 9e-19
Identities = 41/249 (16%), Positives = 74/249 (29%), Gaps = 54/249 (21%)
Query: 1640 PVFTKKIQP--CRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSI 1696
V T +QP F+++ E P + +WF +S
Sbjct: 2 AVIT--LQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLNGTATQTS----------TPS 49
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
+ + DSG + G S + +E + L +SS V
Sbjct: 50 YRITSASVNDSGEYRCQRGLSGR----SDPIQLE---------IHRGWLLLQVSSRVFTE 96
Query: 1757 GQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
G+ K + +V + +NGK K ++ L I++ + +G Y C
Sbjct: 97 GEPLALRCHAWKDKLVYNVLYYRNGKAF------KFFHWNS--NLTILKTNISHNGTYHC 148
Query: 1816 VAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLK 1875
M + V+ P + + + EG+ VTL
Sbjct: 149 SGMGKHRYTSAGISVTVKELFPA----------------PVLNASVTSP-LLEGNLVTLS 191
Query: 1876 CRITGKPRK 1884
C ++
Sbjct: 192 CETKLLLQR 200
Score = 85.7 bits (212), Expect = 3e-18
Identities = 51/317 (16%), Positives = 82/317 (25%), Gaps = 98/317 (30%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V + V C + + WF NG T + S +
Sbjct: 10 WVSVFQEETVTLHCEVLHLPGSS-STQWFLNGTATQTSTP----------SYRITSASVN 58
Query: 573 DSGEYICRATN-------------KWGTAMTKAKVI---------CKVL----TVIVEWF 606
DSGEY C+ W ++V C V ++
Sbjct: 59 DSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYY 118
Query: 607 YNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTN 666
NGK H IL ++G Y C K+ S+
Sbjct: 119 RNGKAFKFFHWNSNLT-----ILKTN---ISHNGTYHCSGMGKHRYTSAGISV------- 163
Query: 667 LILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAH 726
++ E APV ++ L EG
Sbjct: 164 ----------------TVK----------------ELFPAPVLNASVT--SPLLEGNLVT 189
Query: 727 F--EARLTP-TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCR 783
E +L +L ++ K ++ + +I ED G Y C
Sbjct: 190 LSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSE--------YQILTARREDSGLYWCE 241
Query: 784 AYNDYGEAVTSASMKVQ 800
A + G V S +++
Sbjct: 242 AATEDG-NVLKRSPELE 257
Score = 81.1 bits (200), Expect = 1e-16
Identities = 50/303 (16%), Positives = 76/303 (25%), Gaps = 72/303 (23%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V V + E V C V +WF NG
Sbjct: 2 AVITLQPPWVSVFQEETVTLHCEVLH------------------LPGSSSTQWFLNGTAT 43
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDI 228
I +DSGEY CQ + G++ L +
Sbjct: 44 QTSTPS----------YRITSASVNDSGEYRCQ--RGLSGR--SDPIQLEIHRGWLLLQV 89
Query: 229 ---------ELMLK------TLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAE 273
L L+ LV ++ N K L I+
Sbjct: 90 SSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSN--------LTILKTNIS 141
Query: 274 DSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EAS 331
+G Y + ++ V +P L S L EG + E
Sbjct: 142 HNGTYHCSGMGKHRYTSAGISVT------VKELFPAPVLNASVTSPLLEGNLVTLSCETK 195
Query: 332 LIPV-GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 390
L+ + F K + + +IL + ED+G+Y C A + G
Sbjct: 196 LLLQRPGLQLYFSFYMGSKTLRGRNTSSE--------YQILTARREDSGLYWCEAATEDG 247
Query: 391 QAE 393
Sbjct: 248 NVL 250
Score = 79.6 bits (196), Expect = 3e-16
Identities = 45/290 (15%), Positives = 64/290 (22%), Gaps = 103/290 (35%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+WF NG I +SG Y C+ SD + +
Sbjct: 34 TQWFLNGTATQTSTP----------SYRITSASVNDSGEYRCQRGLSGRSDPIQLE---I 80
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ L+L Q EG
Sbjct: 81 HRGWLLL-----------------------------------QVSSRVF--------TEG 97
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
E D V ++ NGK K L I G Y C
Sbjct: 98 EPLALRCH-AWKDKLVYNVLYYRNGKAFKFFHWNSN--------LTILKTNISHNGTYHC 148
Query: 783 RAYNDYGEAVTSASMKVQGKRS-----IILESQLPKGMEV------------------FI 819
+ S+ V+ + S L +G V F
Sbjct: 149 SGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFS 208
Query: 820 SFHE--------------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ I ED G Y C A + G V S +++
Sbjct: 209 FYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDG-NVLKRSPELE 257
Score = 78.0 bits (192), Expect = 1e-15
Identities = 34/241 (14%), Positives = 61/241 (25%), Gaps = 62/241 (25%)
Query: 904 EREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS 963
R D I+ ++ + L + + L C + V ++ NGKA
Sbjct: 71 GRSDPIQLEIHRGWLLLQVSSRVFTEGEPL-ALRCH-AWKDKLVYNVLYYRNGKAFKFFH 128
Query: 964 RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAI 1023
L I + +G Y C KH + +TVK
Sbjct: 129 WNSN--------LTILKTNISHNGTYHCSGMGKHRYTSAGISVTVK-------------- 166
Query: 1024 FANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE---P 1080
E PV + + + E V C +
Sbjct: 167 -------------------------ELFPAPVLNASVTS--PLLEGNLVTLSCETKLLLQ 199
Query: 1081 KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT 1140
+ + ++ + + + DSG Y C A + G +
Sbjct: 200 RPGLQLYFSFYMGSKTLRGRNTSSE--------YQILTARREDSGLYWCEAATEDGNVLK 251
Query: 1141 K 1141
+
Sbjct: 252 R 252
Score = 68.0 bits (166), Expect = 3e-12
Identities = 27/229 (11%), Positives = 50/229 (21%), Gaps = 66/229 (28%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
P +++ + C + S + +WF NG A +
Sbjct: 2 AVITLQPPWVSVFQEETVTLHCEVLHLPGSS-STQWFLNGTATQTSTPS----------Y 50
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
I + DSG Y C+ ++ ++
Sbjct: 51 RITSASVNDSGEYRCQRGLSGRSDP--------------IQLEIH--------------- 81
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 1096
Q+ + E + C K + ++ NG+
Sbjct: 82 ----------------RGWLLLQVSSRV-FTEGEPLALRCHA-WKDKLVYNVLYYRNGKA 123
Query: 1097 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
F L + +G Y C K V
Sbjct: 124 FKFFHWNSN--------LTILKTNISHNGTYHCSGMGKHRYTSAGISVT 164
Score = 65.3 bits (159), Expect = 3e-11
Identities = 43/305 (14%), Positives = 70/305 (22%), Gaps = 75/305 (24%)
Query: 1439 EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEY 1498
+ ++ C+ + +WFLNG I DSGEY
Sbjct: 15 QEETVTLHCE-VLHLPGSSSTQWFLNGTATQTSTPSYRITS----------ASVNDSGEY 63
Query: 1499 LCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEK 1558
C+ D + +
Sbjct: 64 RCQRGLSGRSDPIQLEIHR----------------------------------------- 82
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE------IVRKI 1611
+ Q ++ EGEP C V++ NG + K
Sbjct: 83 ----GWLLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKT 138
Query: 1612 TATE------TTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG 1665
+ + +H+ V E P + P E + E
Sbjct: 139 NISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSP--LLEGNLVTLSCETKL 196
Query: 1666 DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA-KCS 1724
F + +T S + EDSG++ A G K S
Sbjct: 197 LLQRPGLQLYFSF---YMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRS 253
Query: 1725 ANLVV 1729
L +
Sbjct: 254 PELEL 258
Score = 64.2 bits (156), Expect = 6e-11
Identities = 25/177 (14%), Positives = 46/177 (25%), Gaps = 40/177 (22%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
V T+ + + + E + +WF NG +T +
Sbjct: 2 AVITLQPPWVS-VFQEETVTLHCEVLHLPGS-SSTQWFLNGTATQTSTP----------S 49
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEA-----VTSASMKVQGKRSIILESQ---LP------ 812
I+ D G+Y C+ + + +Q + E + L
Sbjct: 50 YRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKD 109
Query: 813 ---------KGMEVFISFHE-----ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ + F FH I G Y C + S+ V+
Sbjct: 110 KLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVK 166
Score = 63.0 bits (153), Expect = 1e-10
Identities = 52/305 (17%), Positives = 75/305 (24%), Gaps = 101/305 (33%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+ +WF NG + + I S +DS Y C+
Sbjct: 30 GSSSTQWFLNGTATQTSTP----------SYRITSASVNDSGEYRCQRGL---------- 69
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
S R D + L E+ + L S VF E E +
Sbjct: 70 ------------SGRSDPIQL--------EIHRGWLLLQVSSRVFT---------EGEPL 100
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVV 184
C + V ++ NGK FH N
Sbjct: 101 ALRCHAWK------------------DKLVYNVLYYRNGKAFKFFHWNS----------N 132
Query: 185 MDIAYVQSHDSGEYVC-----------QWFVNNKPLPAGAKFKTTHDFGY-----VALDI 228
+ I +G Y C V K L + V L
Sbjct: 133 LTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASVTSPLLEGNLVTLSC 192
Query: 229 ELMLKTLVPFTEW-FVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKG 287
E L P + F T+ + I+ A EDSG+Y +A G
Sbjct: 193 ETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSE-----YQILTARREDSGLYWCEAATEDG 247
Query: 288 SATTS 292
+
Sbjct: 248 NVLKR 252
Score = 50.3 bits (120), Expect = 2e-06
Identities = 33/217 (15%), Positives = 56/217 (25%), Gaps = 38/217 (17%)
Query: 822 HEISPVYPEDCGQYSCRAYNDYGEA-----VTSASMKVQGKRSIILE----------SQL 866
+ I+ D G+Y C+ + + +Q + E +
Sbjct: 50 YRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGEPLALRCHAWKD 109
Query: 867 PKGMEGTIDKIAELEGYGHEREDRTIDKIAEL-------EGYGHEREDRIEEDL----GK 915
+ + + H + TI K G G R +
Sbjct: 110 KLVYNVLYYRNGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELF 169
Query: 916 APEFLTTPTDLTLAESTLAHFECR---LTPTNDPSMTVEWFHNGKALSAGSRIKTINDFG 972
L L E L C L + ++ K L +
Sbjct: 170 PAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRGRNTSSE----- 224
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATT-SCKLTV 1008
+I DSGLY C+A + G S +L +
Sbjct: 225 ---YQILTARREDSGLYWCEAATEDGNVLKRSPELEL 258
Score = 48.8 bits (116), Expect = 6e-06
Identities = 21/176 (11%), Positives = 30/176 (17%), Gaps = 61/176 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
S I D GEY C+ + I
Sbjct: 49 SYRITSASVNDSGEYRCQRGLSGRSDPIQLEIH--------------------------- 81
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
Q V E + C A V
Sbjct: 82 -----------------RGWLLLQVSSRVFT--------EGEPLALRCH-AWKDKLVYNV 115
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
++ NGK + N +G Y C + +
Sbjct: 116 LYYRNGKAFKFFHW-NSNLTILKTN-------ISHNGTYHCSGMGKHRYTSAGISV 163
Score = 48.8 bits (116), Expect = 8e-06
Identities = 26/176 (14%), Positives = 40/176 (22%), Gaps = 58/176 (32%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L I G Y C H ++ T++
Sbjct: 132 NLTILKTNISHNGTYHCSGMGKHRYTSAGISV------TVK------------------- 166
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQ---LAPVGDPN 1456
+ P V L+E C+ L
Sbjct: 167 ----------------------ELFPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQ 204
Query: 1457 MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETR 1512
+ +++ K L +N + Y EDSG Y C A G R
Sbjct: 205 LYFSFYMGSKTLRGRNT-SSEY-------QILTARREDSGLYWCEAATEDGNVLKR 252
Score = 42.2 bits (99), Expect = 0.001
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 8/61 (13%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
R L ++ L + I + R +DS +Y C+A G +
Sbjct: 199 QRPGLQLYFSFYMGSKTLRGRNTSS--------EYQILTARREDSGLYWCEAATEDGNVL 250
Query: 63 S 63
Sbjct: 251 K 251
Score = 39.5 bits (92), Expect = 0.006
Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 17/109 (15%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 1113
V T Q + V + V C + + WF NG T + S
Sbjct: 2 AVITLQPP-WVSVFQEETVTLHCEVLHLPGSS-STQWFLNGTATQTSTP----------S 49
Query: 1114 LDMDYVYARDSGEYICRATN-----KWGTAMTKAKVICKAKHDIVTESQ 1157
+ DSGEY C+ + + ++ + + TE +
Sbjct: 50 YRITSASVNDSGEYRCQRGLSGRSDPIQLEIHRGWLLLQVSSRVFTEGE 98
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 115
Score = 95.2 bits (237), Expect = 5e-23
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 14/124 (11%)
Query: 1721 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNG 1780
++ +V+ + + + + G A F +IS V+W +
Sbjct: 1 GSSGSSGLVQGR---------RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDK 51
Query: 1781 KKIIPDIRYKTLEEDNLFTLLIIEAV-VEDSGAYECVAMNNAGEARCEAELVVQSKKAPG 1839
+ + + + + +L + + ++DSG AG+ R A L V K +
Sbjct: 52 TPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE----AGDQRASAALRVTEKPSVF 107
Query: 1840 KQAP 1843
++
Sbjct: 108 SRSG 111
Score = 94.4 bits (235), Expect = 7e-23
Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 7/107 (6%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G+ + D+ + E + A F CR++P N V WF + L A + G
Sbjct: 11 GRRVHIIEDLEDVDVQEGSSATFRCRISPANYE--PVHWFLDKTPLHANELNEIDAQPGG 68
Query: 974 VI-LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
L + + L+DSG +A G+ S L V + +
Sbjct: 69 YHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKPSVFSRSG 111
Score = 88.2 bits (219), Expect = 1e-20
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 8/107 (7%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
+ L ++D ++EG +A F R++P + V WF + P+ G
Sbjct: 12 RRVHIIEDLEDVD-VQEGSSATFRCRISPANYEP--VHWFLDKTPLHANELNEIDAQPGG 68
Query: 765 VI-LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 810
L + + +D G A G+ SA+++V K S+ S
Sbjct: 69 YHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKPSVFSRSG 111
Score = 85.9 bits (213), Expect = 7e-20
Identities = 21/97 (21%), Positives = 36/97 (37%), Gaps = 5/97 (5%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
+ + ++ E A F + WF + P+ ++ +I
Sbjct: 11 GRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYH 70
Query: 1697 -LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L +RQ+ ++DSG A G + SA L V EK
Sbjct: 71 VLTLRQLALKDSGTIYFEA----GDQRASAALRVTEK 103
Score = 74.7 bits (184), Expect = 6e-16
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 405 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
+G+ ++ ++ +++G SA F C ++P N V WF + P+ ++ +
Sbjct: 10 QGRRVHIIEDLEDVD-VQEGSSATFRCRISPANYEP--VHWFLDKTPLHANELNEIDAQP 66
Query: 465 GFV-VMDIAYVQSHDSGEYVCRA 486
G V+ + + DSG A
Sbjct: 67 GGYHVLTLRQLALKDSGTIYFEA 89
Score = 70.1 bits (172), Expect = 2e-14
Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 9/113 (7%)
Query: 1050 KPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF 1109
+ L+D +DV E F CR+ P + + WF + P +
Sbjct: 10 QGRRVHIIEDLED-VDVQEGSSATFRCRISPANYEP--VHWFLDKTPLHANELNEIDAQP 66
Query: 1110 G-FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
G + L + + +DSG A G A + K + + S P S
Sbjct: 67 GGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKPSVFSRSG-PSS 114
Score = 69.0 bits (169), Expect = 6e-14
Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 20/94 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
I L DV+ +E + F CR+ P V WF + P+
Sbjct: 14 VHIIEDLEDVDVQEGSSATFRCRISP-------------------ANYEPVHWFLDKTPL 54
Query: 169 FHKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVCQ 201
++ + G V+ + + DSG +
Sbjct: 55 HANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE 88
Score = 65.1 bits (159), Expect = 2e-12
Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 10/110 (9%)
Query: 1421 KKQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
+ + + ++ D V E S F C+++ V WFL+ PL
Sbjct: 10 QGRRVHIIEDLE--DVDVQEGSSATFRCRIS--PANYEPVHWFLDKTPLHANELNEIDAQ 65
Query: 1480 FGYV-AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQ 1528
G + + +DSG A G A L+ T KP + S
Sbjct: 66 PGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVTEKPSVFSRSG 111
Score = 60.9 bits (148), Expect = 5e-11
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 5/68 (7%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-TLSINSLRADDSAIYTCKATNLLGEAVST 64
+ WF + PL G L++ L DS +A G+ ++
Sbjct: 40 ANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRAS 95
Query: 65 CTLKIEDR 72
L++ ++
Sbjct: 96 AALRVTEK 103
Score = 57.8 bits (140), Expect = 5e-10
Identities = 19/113 (16%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 300 RLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI 357
V + L ++ EG A F + V + + P+ A+
Sbjct: 6 SGLVQGRRVHII---EDLEDVDVQEGSSATFRCRI--SPANYEPVHWFLDKTPLHANELN 60
Query: 358 RTVHAFGMV-VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
G VL + ++D+G A ++ A + V + S+ P
Sbjct: 61 EIDAQPGGYHVLTLRQLALKDSGTIYFEAGDQRASAALRVTEKPSVFSRSGPS 113
Score = 57.8 bits (140), Expect = 5e-10
Identities = 18/91 (19%), Positives = 31/91 (34%), Gaps = 7/91 (7%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG-FISLDMDYVYA 571
++DV E F CR+ P + + WF + P + G + L + +
Sbjct: 22 DVDVQEGSSATFRCRISPANYEP--VHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLAL 79
Query: 572 RDSGEYICRATNKWGTAMTKAKVICKVLTVI 602
+DSG A G A + +
Sbjct: 80 KDSGTIYFEA----GDQRASAALRVTEKPSV 106
Score = 55.1 bits (133), Expect = 5e-09
Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 32/134 (23%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFINIS 1314
+ I ++E V VQE F R+ P + ++ +
Sbjct: 9 VQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTP-----------LHAN 57
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCK 1374
I G+ L + + +D G A G+ A +
Sbjct: 58 ELNEID------------AQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRVT 101
Query: 1375 KIPTIQLQNQVPKG 1388
+ P++ ++ G
Sbjct: 102 EKPSVFSRSGPSSG 115
Score = 52.4 bits (126), Expect = 4e-08
Identities = 12/56 (21%), Positives = 20/56 (35%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATE 1615
+ E VQEG A F R++ V W ++ + + +I A
Sbjct: 11 GRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQP 66
Score = 49.7 bits (119), Expect = 3e-07
Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTF-HDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
V WF + L G +L + ++SG A G A+L+
Sbjct: 45 VHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAALRV 100
Query: 662 VSKTNLILESQLPEG 676
K ++ S G
Sbjct: 101 TEKPSVFSRSGPSSG 115
Score = 48.5 bits (116), Expect = 8e-07
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 5/66 (7%)
Query: 236 VPFTEWFVNNKPLPAGAKFK-TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
WF++ PL A + GY L + +DSG +A G S
Sbjct: 42 YEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA----GDQRASAA 97
Query: 295 LKCLER 300
L+ E+
Sbjct: 98 LRVTEK 103
Score = 43.2 bits (102), Expect = 6e-05
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 1849 VAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ Q + E L+D +V+EGS+ T +CRI+
Sbjct: 8 LVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANY 42
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton,
immunoglobulin domain, muscle protein, phosphorylation,
repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A
1tiu_A 2rq8_A
Length = 93
Score = 93.9 bits (234), Expect = 6e-23
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 5/95 (5%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
K + F + A FE+E +P +W + P+ +SPD +I K I
Sbjct: 3 MALIEVEKPLYGVEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLAASPDCEIIEDGKKHI 61
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
LI+ + +G + A N K +ANL V+E
Sbjct: 62 LILHNCQLGMTGEVSFQAAN----TKSAANLKVKE 92
Score = 92.4 bits (230), Expect = 2e-22
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 7/95 (7%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
E + + AHFE L+ +P + +W G+ L+A + I D
Sbjct: 4 ALIEVEKPLYGVEVFVGETAHFEIELS---EPDVHGQWKLKGQPLAASPDCEIIEDGKKH 60
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
IL +++ L +G + +A N ++ L VK
Sbjct: 61 ILILHNCQLGMTGEVSFQAAN----TKSAANLKVK 91
Score = 82.3 bits (204), Expect = 7e-19
Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL 1797
G + + + VG+ A F+ ++S W G+ + + +E+
Sbjct: 1 GAMALIEVEKPLYGVEVFVGETAHFEIELSEPDV-HGQWKLKGQPLAASPDCEIIEDGKK 59
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
L++ + +G A + A L V+
Sbjct: 60 HILILHNCQLGMTGEVSFQ----AANTKSAANLKVK 91
Score = 77.7 bits (192), Expect = 3e-17
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 705 QAPV-FTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
A + PL ++ + GE AHFE L+ +P + +W G+P+ D
Sbjct: 3 MALIEVEKPLYGVE-VFVGETAHFEIELS---EPDVHGQWKLKGQPLAASPDCEIIEDGK 58
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
IL + G+ S +A ++A++KV+
Sbjct: 59 KHILILHNCQLGMTGEVSFQA----ANTKSAANLKVK 91
Score = 75.4 bits (186), Expect = 2e-16
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+ + +E + G++AHFE L+ +P++ +W G+P+ +++ D
Sbjct: 4 ALIEVEKPLYGVE-VFVGETAHFEIELS---EPDVHGQWKLKGQPLAASPDCEIIEDGKK 59
Query: 467 VVMDIAYVQSHDSGEYVCRAWN 488
++ + Q +GE +A N
Sbjct: 60 HILILHNCQLGMTGEVSFQAAN 81
Score = 70.0 bits (172), Expect = 2e-14
Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
L ++V HF+ L S+P + W G+P A + + D
Sbjct: 3 MALIEVEKPLYG-VEVFVGETAHFEIEL---SEPDVHGQWKLKGQPLAASPDCEIIEDGK 58
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTA 1138
L + +GE +A N A
Sbjct: 59 KHILILHNCQLGMTGEVSFQAANTKSAA 86
Score = 67.3 bits (165), Expect = 1e-13
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 20/91 (21%)
Query: 111 FISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH 170
L VE E HF+ + ++P++ +W G+P+
Sbjct: 8 VEKPLYGVEVFVGETAHFEIEL--------------------SEPDVHGQWKLKGQPLAA 47
Query: 171 KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+++ D ++ + Q +GE Q
Sbjct: 48 SPDCEIIEDGKKHILILHNCQLGMTGEVSFQ 78
Score = 66.6 bits (163), Expect = 2e-13
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
++P++ +W G PL+ D L +++ + + + +A N S
Sbjct: 30 SEPDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN----TKSA 85
Query: 65 CTLKIED 71
LK+++
Sbjct: 86 ANLKVKE 92
Score = 62.7 bits (153), Expect = 4e-12
Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
++V HF+ L S+P + W G+P A + + D L +
Sbjct: 14 GVEVFVGETAHFEIEL---SEPDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLG 70
Query: 573 DSGEYICRATNKWGTA 588
+GE +A N A
Sbjct: 71 MTGEVSFQAANTKSAA 86
Score = 62.7 bits (153), Expect = 5e-12
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 312 LQF-QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVL 368
++ + L + GE AHFE I + + + ++ G+P+ AS + +L
Sbjct: 6 IEVEKPLYGVEVFVGETAHFE---IELSEPDVHGQWKLKGQPLAASPDCEIIEDGKKHIL 62
Query: 369 EILGTKIEDTGVYTCRATNKWGQAEISV 396
+ ++ TG + +A N A + V
Sbjct: 63 ILHNCQLGMTGEVSFQAANTKSAANLKV 90
Score = 61.5 bits (150), Expect = 1e-11
Identities = 17/94 (18%), Positives = 34/94 (36%), Gaps = 8/94 (8%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ ++ ++ FE + + +P++ +W L G+PL I D
Sbjct: 4 ALIEVEKPLYGV-EVFVGETAHFEIE---LSEPDVHGQWKLKGQPLAASPDCEIIEDGKK 59
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ +GE +A N ++ A LK
Sbjct: 60 HILILHNCQLGMTGEVSFQAAN----TKSAANLK 89
Score = 53.5 bits (129), Expect = 9e-09
Identities = 11/51 (21%), Positives = 21/51 (41%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
+W + +PL A + D L + +G + +A N+K +A
Sbjct: 37 QWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTKSAAN 87
Score = 49.6 bits (119), Expect = 2e-07
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
V +W G+ L D IL + C +G +A N + A+L
Sbjct: 33 DVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN----TKSAANL 88
Query: 660 K 660
K
Sbjct: 89 K 89
Score = 46.1 bits (110), Expect = 4e-06
Identities = 13/116 (11%), Positives = 19/116 (16%), Gaps = 48/116 (41%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAFFFP 1309
+ V V E FE + + P +
Sbjct: 5 LIEVEKPLYGVEVFVGETAHFEIELSEPDVHGQWKLKGQPLAASPDCEII---------- 54
Query: 1310 FINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
D L + GE +A N A
Sbjct: 55 ------------------------EDGKKHILILHNCQLGMTGEVSFQAANTKSAA 86
Score = 42.3 bits (100), Expect = 9e-05
Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 9/62 (14%)
Query: 1565 FVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGK 1624
+V GE A F ++ P W + G + + A+ E+ GK
Sbjct: 8 VEKPLYGVEVFVGETAHFEIELS-EPDVHGQWKLKG--------QPLAASPDCEIIEDGK 58
Query: 1625 IQ 1626
Sbjct: 59 KH 60
Score = 35.0 bits (81), Expect = 0.034
Identities = 5/28 (17%), Positives = 9/28 (32%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
V +PL V G + ++
Sbjct: 6 IEVEKPLYGVEVFVGETAHFEIELSEPD 33
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} PDB: 2yz8_A
Length = 103
Score = 94.3 bits (235), Expect = 6e-23
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 5/101 (4%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + P F + ++ E A P +KW + + + +
Sbjct: 1 GSSGSSGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQE 59
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L++R + +DSG ++ G SA L V
Sbjct: 60 GAMLELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTAL 96
Score = 93.2 bits (232), Expect = 1e-22
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
F DL + E A C L+ P V+W + L G + + +
Sbjct: 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP---VKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L + ++ +DSG Y+C G+ TTS LTV
Sbjct: 64 ELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTAL 96
Score = 87.0 bits (216), Expect = 2e-20
Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 5/97 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
P F + + G A +S+ V W + P +Y +E + L+
Sbjct: 8 PVRFQEALKDLEVLEGGAATLRCVLSS-VAAPVKWCYGNNVLRPGDKYSLRQEGAMLELV 66
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+ +DSG Y C G+ A L V + +
Sbjct: 67 VRNLRPQDSGRYSCS----FGDQTTSATLTVTALPSG 99
Score = 79.3 bits (196), Expect = 1e-17
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
F L +++ + EG A L+ P V+W + ++ G ++ + +
Sbjct: 8 PVRFQEALKDLE-VLEGGAATLRCVLSSVAAP---VKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L + + P+D G+YSC G+ TSA++ V
Sbjct: 64 ELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTAL 96
Score = 77.8 bits (192), Expect = 3e-17
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P +F +K LE + +G +A C L+ V P V+W + + ++ + + +
Sbjct: 8 PVRFQEALKDLE-VLEGGAATLRCVLSSVAAP---VKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 468 VMDIAYVQSHDSGEYVCRA 486
+ + ++ DSG Y C
Sbjct: 64 ELVVRNLRPQDSGRYSCSF 82
Score = 71.2 bits (175), Expect = 7e-15
Identities = 13/93 (13%), Positives = 28/93 (30%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F L D+E E C + + V+W + +
Sbjct: 9 VRFQEALKDLEVLEGGAATLRCVL--------------------SSVAAPVKWCYGNNVL 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
++ + + + + + ++ DSG Y C
Sbjct: 49 RPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS 81
Score = 71.2 bits (175), Expect = 7e-15
Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P F L+D L+V E G C L S + W + G + + +
Sbjct: 8 PVRFQEALKD-LEVLEGGAATLRCVL---SSVAAPVKWCYGNNVLRPGDKYSLRQEGAML 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + + +DSG Y C G T A + A
Sbjct: 64 ELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTAL 96
Score = 67.7 bits (166), Expect = 1e-13
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 8/103 (7%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
P RF +K +++E + C + V+W L ++++
Sbjct: 3 SGSSGPVRFQEALKDL-EVLEGGAATLRCV---LSSVAAPVKWCYGNNVLRPGDKYSLRQ 58
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ + + + P+DSG Y C G T A L T P
Sbjct: 59 EGAMLELVVRNLRPQDSGRYSCSF----GDQTTSATLTVTALP 97
Score = 64.7 bits (158), Expect = 1e-12
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
++W L G + + ++ L + +LR DS Y+C G+ ++
Sbjct: 34 SVAAPVKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF----GDQTTSA 89
Query: 66 TLKIEDR 72
TL +
Sbjct: 90 TLTVTAL 96
Score = 61.6 bits (150), Expect = 2e-11
Identities = 18/108 (16%), Positives = 36/108 (33%), Gaps = 16/108 (14%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
F + L +L EG A + V++ Y + + M
Sbjct: 9 VRFQ---EALKDLEVLEGGAATLRCV---LSSVAAPVKWCYGNNVLRPGDKYSLRQEGAM 62
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
+ L + + +D+G Y+C ++ A ++V P +S
Sbjct: 63 LELVVRNLRPQDSGRYSCSFGDQTTSATLTV--------TALPSGPSS 102
Score = 60.0 bits (146), Expect = 6e-11
Identities = 19/87 (21%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+L+V E G C L S + W + G + + + L + + +
Sbjct: 17 DLEVLEGGAATLRCVL---SSVAAPVKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQ 73
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVL 599
DSG Y C G T A + L
Sbjct: 74 DSGRYSCSF----GDQTTSATLTVTAL 96
Score = 53.1 bits (128), Expect = 2e-08
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
+W N L G K+ + + L + +DSG Y+ + SAT
Sbjct: 40 KWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSFGDQTTSAT 90
Score = 52.7 bits (127), Expect = 2e-08
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
V+W Y L G +Y + ++ L + ++SG Y C G T A+L
Sbjct: 39 VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCSF----GDQTTSATL 91
Score = 48.9 bits (117), Expect = 5e-07
Identities = 17/131 (12%), Positives = 33/131 (25%), Gaps = 52/131 (39%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEP--------------RVDPRLRVECSLSTAFF 1307
P RF ++ + V E + R + +
Sbjct: 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAPVKWCYGNNVLRPGDKYSLR-------- 57
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
+ + L + + P+D G Y C G+ T
Sbjct: 58 --------------------------QEGAMLELVVRNLRPQDSGRYSCSF----GDQTT 87
Query: 1368 KATISCKKIPT 1378
AT++ +P+
Sbjct: 88 SATLTVTALPS 98
Score = 41.5 bits (98), Expect = 2e-04
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
E LKD V EG A TL+C ++
Sbjct: 8 PVRFQEALKDLEVLEGGAATLRCVLSSVA 36
Score = 41.2 bits (97), Expect = 2e-04
Identities = 10/71 (14%), Positives = 19/71 (26%), Gaps = 12/71 (16%)
Query: 1555 EDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITAT 1614
P F + +V EG A ++ P V W +
Sbjct: 4 GSSGP---VRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGN--------NVLRPG 51
Query: 1615 ETTEMEHKGKI 1625
+ + +G +
Sbjct: 52 DKYSLRQEGAM 62
Score = 37.7 bits (88), Expect = 0.004
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+ + P+D G+YSC G+ TSA++ V
Sbjct: 67 VRNLRPQDSGRYSCSF----GDQTTSATLTVTAL 96
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle
protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB:
1wiu_A
Length = 93
Score = 93.5 bits (233), Expect = 7e-23
Identities = 16/94 (17%), Positives = 27/94 (28%), Gaps = 2/94 (2%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P+ LT + + + E P T W + +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTTS 59
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+ DSG Y K N+ GE ++ V+
Sbjct: 60 IFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
Score = 92.4 bits (230), Expect = 2e-22
Identities = 17/93 (18%), Positives = 26/93 (27%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
+ P LT I G + W + + ++
Sbjct: 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSI 60
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
A DSG Y+ N GE E++VQ
Sbjct: 61 FFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
Score = 92.4 bits (230), Expect = 2e-22
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
P + + EV+F G P PT W D +P+ + S+ + +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 1730
DSG + + +N G+ + ++V+
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
Score = 80.4 bits (199), Expect = 3e-18
Identities = 14/95 (14%), Positives = 21/95 (22%), Gaps = 3/95 (3%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P I ++ G + E P W
Sbjct: 2 KPKILTASRKIK-IKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ D G Y + N+ GE + VQ
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
Score = 70.4 bits (173), Expect = 9e-15
Identities = 12/66 (18%), Positives = 22/66 (33%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P+ W +L + ++ S + DS Y K N LGE +
Sbjct: 28 GAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAI 87
Query: 65 CTLKIE 70
+ ++
Sbjct: 88 FEVIVQ 93
Score = 67.7 bits (166), Expect = 1e-13
Identities = 13/93 (13%), Positives = 24/93 (25%), Gaps = 3/93 (3%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P + + + + + + P W A +
Sbjct: 2 KPKILTASRK-IKIKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
S+ DSG Y + N+ G +VI
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGEDEAIFEVI 91
Score = 64.3 bits (157), Expect = 1e-12
Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
PK + + ++ +K G + + E P+ W + + +
Sbjct: 2 KPKILTASRKIK-IKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
+ + DSG Y + N
Sbjct: 59 SIFFPSAKRADSGNYKLKVKN 79
Score = 62.3 bits (152), Expect = 6e-12
Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 3/93 (3%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
P+ +T + ++ + E +G P+ W +
Sbjct: 2 KPKILTASRKI-KIKAGFTHNLEVDF--IGAPDPTATWTVGDSGAALAPELLVDAKSSTT 58
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
++ F DSG Y + N G DE +
Sbjct: 59 SIFFPSAKRADSGNYKLKVKNELGEDEAIFEVI 91
Score = 61.2 bits (149), Expect = 2e-11
Identities = 12/77 (15%), Positives = 22/77 (28%), Gaps = 2/77 (2%)
Query: 322 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
G + E I G T + + + + K D+G Y
Sbjct: 16 AGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNY 73
Query: 382 TCRATNKWGQAEISVNL 398
+ N+ G+ E +
Sbjct: 74 KLKVKNELGEDEAIFEV 90
Score = 60.8 bits (148), Expect = 2e-11
Identities = 12/84 (14%), Positives = 21/84 (25%), Gaps = 2/84 (2%)
Query: 512 DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYA 571
+ + + + P W A + S+
Sbjct: 10 RKIKIKAGFTHNLEVDFI--GAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKR 67
Query: 572 RDSGEYICRATNKWGTAMTKAKVI 595
DSG Y + N+ G +VI
Sbjct: 68 ADSGNYKLKVKNELGEDEAIFEVI 91
Score = 59.3 bits (144), Expect = 7e-11
Identities = 9/92 (9%), Positives = 21/92 (22%), Gaps = 19/92 (20%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P ++ ++ K + + G P+ W
Sbjct: 3 PKILTASRKIKIKAGFTHNLEVDFI---------GA----------PDPTATWTVGDSGA 43
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+ + + + + DSG Y
Sbjct: 44 ALAPELLVDAKSSTTSIFFPSAKRADSGNYKL 75
Score = 59.3 bits (144), Expect = 9e-11
Identities = 11/60 (18%), Positives = 17/60 (28%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W V + + ++ A DSG Y +K N G +
Sbjct: 32 PTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVI 91
Score = 53.5 bits (129), Expect = 9e-09
Identities = 9/56 (16%), Positives = 16/56 (28%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
P ++ K++ G G P P W + + A +T
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSST 57
Score = 52.7 bits (127), Expect = 2e-08
Identities = 7/58 (12%), Positives = 13/58 (22%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
W + +SG Y+ + N+ G D +
Sbjct: 34 ATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVI 91
Score = 45.8 bits (109), Expect = 5e-06
Identities = 14/123 (11%), Positives = 24/123 (19%), Gaps = 49/123 (39%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVE----PRV-----------DPRLRVECSLSTAFFF 1308
P+ +T + ++ E P P L V+
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVD--------- 52
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
S+ D G Y + N+ GE
Sbjct: 53 -------------------------AKSSTTSIFFPSAKRADSGNYKLKVKNELGEDEAI 87
Query: 1369 ATI 1371
+
Sbjct: 88 FEV 90
Score = 40.8 bits (96), Expect = 3e-04
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + +K G L+ G P
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPD 31
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 104
Score = 93.2 bits (232), Expect = 1e-22
Identities = 20/98 (20%), Positives = 31/98 (31%), Gaps = 5/98 (5%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
+ + E FEC L+ S W GK + + SR + IL
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHE-SASDPAMWTVGGKTVGSSSRFQATRQGRKYIL 67
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGI 1014
+ + D+G T+ L V+ R G
Sbjct: 68 VVREAAPSDAGEVVFSV----RGLTSKASLIVRERSGP 101
Score = 89.4 bits (222), Expect = 3e-21
Identities = 21/101 (20%), Positives = 34/101 (33%), Gaps = 5/101 (4%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + TK+++ E + FE W + SS FQ
Sbjct: 2 SSGSSGHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQ 61
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
K IL++R+ D+G A+L+V E+
Sbjct: 62 GRKYILVVREAAPSDAGEVVFSVRG----LTSKASLIVRER 98
Score = 88.2 bits (219), Expect = 7e-21
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
+ + + G+ F+ +S W GK + R++ + + L
Sbjct: 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYIL 67
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
++ EA D+G +A L+V+ + P
Sbjct: 68 VVREAAPSDAGEVVFS----VRGLTSKASLIVRERSGP 101
Score = 84.8 bits (210), Expect = 1e-19
Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
T L ++ + EGE+ FE L+ + W GK + + SRF+ I
Sbjct: 9 VGITKRLKTME-VLEGESCSFECVLSH-ESASDPAMWTVGGKTVGSSSRFQATRQGRKYI 66
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
L + P D G+ + AS+ V+ +
Sbjct: 67 LVVREAAPSDAGEVVFSV----RGLTSKASLIVRERSGP 101
Score = 78.6 bits (194), Expect = 2e-17
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
T +K++E + +G+S FEC L+ W GK + +R +
Sbjct: 8 HVGITKRLKTME-VLEGESCSFECVLSHE-SASDPAMWTVGGKTVGSSSRFQATRQGRKY 65
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
++ + D+GE V
Sbjct: 66 ILVVREAAPSDAGEVVFSVRG 86
Score = 72.0 bits (177), Expect = 4e-15
Identities = 14/93 (15%), Positives = 25/93 (26%), Gaps = 18/93 (19%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
L +E E E+ F+C + W GK +
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHE------------------SASDPAMWTVGGKTV 50
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+R + ++ + D+GE V
Sbjct: 51 GSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83
Score = 70.9 bits (174), Expect = 8e-15
Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
T +L+ ++V E F+C L + W G+ + SR +
Sbjct: 6 SGHVGITKRLKT-MEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSSRFQATRQGR 63
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTA 1138
L + D+GE + A
Sbjct: 64 KYILVVREAAPSDAGEVVFSVRGLTSKA 91
Score = 69.0 bits (169), Expect = 4e-14
Identities = 10/67 (14%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ W G + SR ++T L + D+ S
Sbjct: 36 SASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV----RGLTSKA 91
Query: 66 TLKIEDR 72
+L + +R
Sbjct: 92 SLIVRER 98
Score = 68.2 bits (167), Expect = 9e-14
Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
++KT +++E +S FEC L+ + W + GK + +RF
Sbjct: 8 HVGITKRLKTM-EVLEGESCSFECVLSH-ESASDPAMWTVGGKTVGSSSRFQATRQGRKY 65
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGI 1523
+ P D+GE + ++A L + G
Sbjct: 66 ILVVREAAPSDAGEVVFSVRG----LTSKASLIVRERSGP 101
Score = 65.9 bits (161), Expect = 6e-13
Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG 372
+ L + EGE FE + + + GK + +S R + +L +
Sbjct: 13 KRLKTMEVLEGESCSFECV-LSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVRE 71
Query: 373 TKIEDTGVYTCRATNKWGQAEISVN 397
D G +A + V
Sbjct: 72 AAPSDAGEVVFSVRGLTSKASLIVR 96
Score = 63.2 bits (154), Expect = 5e-12
Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
++V E F+C L + W G+ + SR + L +
Sbjct: 17 TMEVLEGESCSFECVL-SHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPS 75
Query: 573 DSGEYICRATNKWGTA 588
D+GE + A
Sbjct: 76 DAGEVVFSVRGLTSKA 91
Score = 55.9 bits (135), Expect = 2e-09
Identities = 11/67 (16%), Positives = 23/67 (34%)
Query: 224 VALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKAT 283
+ + L ++ W V K + + ++F+ T L + A D+G
Sbjct: 26 CSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR 85
Query: 284 NSKGSAT 290
A+
Sbjct: 86 GLTSKAS 92
Score = 51.6 bits (124), Expect = 6e-08
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
W GK + R++ IL + ++G +KASL
Sbjct: 41 AMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV----RGLTSKASLI 94
Score = 47.4 bits (113), Expect = 2e-06
Identities = 15/122 (12%), Positives = 28/122 (22%), Gaps = 34/122 (27%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRV-EPRVDPRLR-----VECSLSTAFFFPFINISTAF 1317
++++ V E E FE + + S+ F
Sbjct: 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKT-----------VGSSSRF 56
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
L + P D GE V +KA++ ++
Sbjct: 57 QA-------------TRQGRKYILVVREAAPSDAGEVVFSV----RGLTSKASLIVRERS 99
Query: 1378 TI 1379
Sbjct: 100 GP 101
Score = 44.7 bits (106), Expect = 2e-05
Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVN 1605
+ + +V EGE F C MW + G T+ +
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGS 52
Score = 37.4 bits (87), Expect = 0.005
Identities = 6/37 (16%), Positives = 12/37 (32%), Gaps = 4/37 (10%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 860
+ P D G+ + AS+ V+ +
Sbjct: 69 VREAAPSDAGEVVFSV----RGLTSKASLIVRERSGP 101
Score = 35.1 bits (81), Expect = 0.039
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ + LK V EG + + +C ++
Sbjct: 9 VGITKRLKTMEVLEGESCSFECVLSH 34
>1nn8_R CD155 antigen, poliovirus receptor; icosahedral virus,
picornavirus, virus/receptor complex; 15.00A {Homo
sapiens} SCOP: i.6.1.1 PDB: 1dgi_R
Length = 302
Score = 98.6 bits (245), Expect = 3e-22
Identities = 44/272 (16%), Positives = 82/272 (30%), Gaps = 28/272 (10%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFGMVV-----LEILGTKIEDTGVYTCRA-TNKWG 390
+M V G S R+ V A L + G ++ED G YTC T G
Sbjct: 45 SGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQG 104
Query: 391 QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK 450
+ + L + P+ T+ ++ ++ L C + P ++ W +
Sbjct: 105 SRSVDIWLRVLA-----KPQNTAEVQKVQ-LTGEPVPMARCV-STGGRPPAQITWHSDLG 157
Query: 451 PIFHKNRVKMVSDFGFVVMD---IAYVQSHDSGEYVCRAWNNFIFIP---PFPIFIFHQI 504
+ + ++V V + D C+ + P + +++
Sbjct: 158 GMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPP 217
Query: 505 RLPSPSQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWFFNGRPFATGSRVKTVYDFGFIS 563
+ DN + C S+P +W P + +
Sbjct: 218 EVSISGYDNNWYLGQNEATLTCDAR--SNPEPTGYNWSTTMGPLPPFAVAQGA------Q 269
Query: 564 LDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
L + V + IC TN G + V
Sbjct: 270 LLIRPVDKPINTTLICNVTNALGARQAELTVQ 301
Score = 92.9 bits (230), Expect = 3e-20
Identities = 37/317 (11%), Positives = 73/317 (23%), Gaps = 64/317 (20%)
Query: 1564 VFVSQPEAQKVQEGEPARF-CTRVTGYPRP-----RVMWLINGHTIVNEIVR-------- 1609
V V P G+ C + ++ W +G + +
Sbjct: 2 VVVQAPTQVPGFLGDSVTLPC-YLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYS 60
Query: 1610 -----KITATETTEMEHKGKIQERVVDAS-----------------EKPAK-----PPVF 1642
+ A ++ + P
Sbjct: 61 ESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQN 120
Query: 1643 TKKIQPCRAFEQDQARFE-VEFDGDPLPTIKWFREDFPITSSPDFQIH---TFSTKSILI 1698
T ++Q + + V G P I W + + ++ T + S+ I
Sbjct: 121 TAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWI 180
Query: 1699 MRQVFMEDSGVFAVIAENRGGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
+ D E+ + + NL V P ++ +
Sbjct: 181 LVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY---------YPPEVSISGYDNNWYLG 231
Query: 1757 GQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC 1815
A + +P W + P + + LLI + C
Sbjct: 232 QNEATLTCDARSNPEPTGYNWSTTMGPLPPF----AVAQGA--QLLIRPVDKPINTTLIC 285
Query: 1816 VAMNNAGEARCEAELVV 1832
N G + E + V
Sbjct: 286 NVTNALGARQAELTVQV 302
Score = 77.4 bits (190), Expect = 4e-15
Identities = 41/322 (12%), Positives = 82/322 (25%), Gaps = 54/322 (16%)
Query: 110 VFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH--NGKP 167
V + V ++V C ++ + +L + + FH G
Sbjct: 2 VVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWAR---HGESGSMAVFHQTQGPS 58
Query: 168 IFHKNRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH--- 219
R++ V+ + + ++ D G Y C FV P G++
Sbjct: 59 YSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCL-FVTF---PQGSRSVDIWLRV 114
Query: 220 ----DFGYVALDIELMLKTLVPFT------------EWFVNNKPLPAGAKFKTTHDFGYV 263
++L + + W + +P ++
Sbjct: 115 LAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVT 174
Query: 264 A---LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPL-FSLQFQHLSN 319
+V + D T K + T+ L V YP S+ +
Sbjct: 175 VTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTV----NLTVY--YPPEVSISGYDNNW 228
Query: 320 LSEGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIED 377
A +A P + + P+ + L I
Sbjct: 229 YLGQNEATLTCDARSNP---EPTGYNWSTTMGPLPPFAVAQGA------QLLIRPVDKPI 279
Query: 378 TGVYTCRATNKWGQAEISVNLE 399
C TN G + + ++
Sbjct: 280 NTTLICNVTNALGARQAELTVQ 301
Score = 73.2 bits (179), Expect = 9e-14
Identities = 30/233 (12%), Positives = 54/233 (23%), Gaps = 53/233 (22%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI- 975
P+ + L + C + P + W + + S++ +
Sbjct: 118 PQNTAEVQKVQLTGEPVPMARCV-STGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVT 176
Query: 976 --LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
+ D TCK ++ E + + V
Sbjct: 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVN------LTV----------------- 213
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWFF 1092
Y PP + DN + C S+P +W
Sbjct: 214 ----YY-------------PPEVSISGYDNNWYLGQNEATLTCDAR--SNPEPTGYNWST 254
Query: 1093 NGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
P + + L + V + IC TN G + V
Sbjct: 255 TMGPLPPFAVAQGA------QLLIRPVDKPINTTLICNVTNALGARQAELTVQ 301
Score = 73.2 bits (179), Expect = 1e-13
Identities = 38/365 (10%), Positives = 68/365 (18%), Gaps = 128/365 (35%)
Query: 708 VFTVPLSNIDDLREGENAHFEARLTPTDDP---KLKVEWFWNGKPMKTG----------- 753
V + + G++ L + ++ W +G+
Sbjct: 2 VVVQAPTQVP-GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYS 60
Query: 754 -------SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYND-YGEAVTSASMKVQGKRSI 805
R + L + + ED G Y+C G ++V K
Sbjct: 61 ESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQN 120
Query: 806 ILESQ------------------------------------------LPKGMEVFISFHE 823
E Q G S
Sbjct: 121 TAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWI 180
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
+ P D +C+ ++ E ++ L P
Sbjct: 181 LVPSSQVDGKNVTCKVEHESFEKPQLL--------TVNLTVYYPP--------------- 217
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
++ + A C +
Sbjct: 218 ---------------------------------EVSISGYDNNWYLGQNEATLTCDAR-S 243
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
N W L + + L I V + C TN G
Sbjct: 244 NPEPTGYNWSTTMGPLPPFAVAQGAQ------LLIRPVDKPINTTLICNVTNALGARQAE 297
Query: 1004 CKLTV 1008
+ V
Sbjct: 298 LTVQV 302
Score = 72.8 bits (178), Expect = 1e-13
Identities = 37/297 (12%), Positives = 70/297 (23%), Gaps = 72/297 (24%)
Query: 424 GDSAHFECTLTPVNDPE---LKVEWFHNGKP----IFHKNRVKMVSDFGFVVMD------ 470
GDS C L N ++ W +G+ +FH+ + S+ +
Sbjct: 15 GDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGA 74
Query: 471 --------IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQD-----NLDVP 517
+ ++ D G Y C P + +R+ + Q+ + +
Sbjct: 75 ELRNASLRMFGLRVEDEGNYTCLFVTF----PQGSRSVDIWLRVLAKPQNTAEVQKVQLT 130
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI---SLDMDYVYARDS 574
C P +I W + S+V + D
Sbjct: 131 GEPVPMARCV-STGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDG 189
Query: 575 GEYICRATNKWGTAMTKAKVI----------------------------CKV----LTVI 602
C+ ++ V C
Sbjct: 190 KNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTG 249
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
W LP + L I + + C TN G+ + ++
Sbjct: 250 YNWSTTMGPLPPFAVAQGA------QLLIRPVDKPINTTLICNVTNALGARQAELTV 300
Score = 70.1 bits (171), Expect = 1e-12
Identities = 37/334 (11%), Positives = 71/334 (21%), Gaps = 103/334 (30%)
Query: 3 PRADPNLKIEWFKNGVPLSLG------------------SRIRSTFDFGLVTLSINSLRA 44
++ W ++G S+ R + +L + LR
Sbjct: 29 MEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRV 88
Query: 45 DDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPEL 104
+D YTC + S LR
Sbjct: 89 EDEGNYTCLFVTFPQGSRSVDI------------WLR----------------------- 113
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
V P + + V+ C + P ++ W +
Sbjct: 114 VLAKPQNTAEVQKVQLTGEPVPMARCVSTGGR------------------PPAQITWHSD 155
Query: 165 GKPIFHKNRVKMVSDFGFVVMD---IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDF 221
+ + ++V V + D C+ V ++
Sbjct: 156 LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCK--VEHESFEKPQLLTVNLTV 213
Query: 222 GYVALDIELMLKTLVPFTE--------------------WFVNNKPLPAGAKFKTTHDFG 261
Y ++ + + W PLP A +
Sbjct: 214 YY-PPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGA---- 268
Query: 262 YVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
L I + TN+ G+ T+
Sbjct: 269 --QLLIRPVDKPINTTLICNVTNALGARQAELTV 300
Score = 69.7 bits (170), Expect = 1e-12
Identities = 42/335 (12%), Positives = 78/335 (23%), Gaps = 94/335 (28%)
Query: 1441 QSTKFECQLAPVGDPN---MKVEWFLNGKPLP-------HKNRFNPIYDFGYVAMNFGW- 1489
S C L ++ W +G+ ++ +VA G
Sbjct: 16 DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAE 75
Query: 1490 ----------VYPEDSGEYLCRA-TNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEK 1538
+ ED G Y C T G L+
Sbjct: 76 LRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLR---------------------- 113
Query: 1539 IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWL 1597
P ++ + ++ C G P ++ W
Sbjct: 114 --------------------VLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWH 153
Query: 1598 INGHTIVNEIVRKITATETTEM-----------EHKGKIQERVV-DASEKPA-------- 1637
+ + N + T + + +V ++ EKP
Sbjct: 154 SDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTV 213
Query: 1638 --KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTK 1694
P V Q++A + +P PT W P+ +
Sbjct: 214 YYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPP------FAVAQG 267
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
+ L++R V + N G + + V
Sbjct: 268 AQLLIRPVDKPINTTLICNVTNALGARQAELTVQV 302
Score = 69.4 bits (169), Expect = 2e-12
Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 27/236 (11%)
Query: 259 DFGYVALDIVGAYAEDSGIYTVKA-TNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHL 317
+ +L + G ED G YT T +GS + L+ L + P + + Q +
Sbjct: 75 ELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK-------PQNTAEVQKV 127
Query: 318 SNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV---LEILGTK 374
L+ + + G + + + + + ++ + + V ++ +
Sbjct: 128 Q-LTGEPVPMAR-CVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSS 185
Query: 375 IEDTGVYTCRATNKWGQAEI--SVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECT 432
D TC+ ++ + +VNL PP+ + + A C
Sbjct: 186 QVDGKNVTCKVEHESFEKPQLLTVNLTVYY-----PPEVSISGYDNNWYLGQNEATLTCD 240
Query: 433 LTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+P W P+ + + I V + +C N
Sbjct: 241 ARSNPEP-TGYNWSTTMGPL---PPFAVAQGAQLL---IRPVDKPINTTLICNVTN 289
Score = 64.7 bits (157), Expect = 5e-11
Identities = 37/352 (10%), Positives = 76/352 (21%), Gaps = 107/352 (30%)
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMR---IDWFFNGRP-------FATGSRV 553
+ + +P+ + V C L+ + + W +G G
Sbjct: 2 VVVQAPT--QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSY 59
Query: 554 KTVYDFGFI-----------SLDMDYVYARDSGEYICRATNKWGTAMTK----------- 591
F+ SL M + D G Y C + +
Sbjct: 60 SESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQ 119
Query: 592 ---------------AKVICKVL----TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDIL 632
C + W + +P+ + F + + +
Sbjct: 120 NTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLW 179
Query: 633 YCY---EENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLED 689
+ + C+ ++ ++ L P
Sbjct: 180 ILVPSSQVDGKNVTCKVEHESFEKPQLLTVN--------LTVYYP--------------- 216
Query: 690 AAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHF--EARLTPTDDPKLKVEWFWNG 747
P ++ + + A +AR P W
Sbjct: 217 -----------------PEVSISGYDNNWYLGQNEATLTCDARSNP---EPTGYNWSTTM 256
Query: 748 KPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
P+ + + L I PV C N G +++V
Sbjct: 257 GPLPPFAVAQGA------QLLIRPVDKPINTTLICNVTNALGARQAELTVQV 302
Score = 63.2 bits (153), Expect = 2e-10
Identities = 24/194 (12%), Positives = 44/194 (22%), Gaps = 37/194 (19%)
Query: 1697 LIMRQVFMEDSGVFA-VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
L M + +ED G + + G L V + P + +
Sbjct: 81 LRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV----------LAKPQNTAEVQKVQLT 130
Query: 1756 VGQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYKTLEEDNLFT---LLIIEAVVEDSG 1811
+ + +P + W + + P+ T L I+ + G
Sbjct: 131 GEPVPMARCVSTGGRPPAQITWHSDLGGM-PNTSQVPGFLSGTVTVTSLWILVPSSQVDG 189
Query: 1812 A-YECVAMNNAGEA--RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKE 1868
C + + E L V +
Sbjct: 190 KNVTCKVEHESFEKPQLLTVNLTVYYPP------------------EVSISGYDNNWYLG 231
Query: 1869 GSAVTLKCRITGKP 1882
+ TL C P
Sbjct: 232 QNEATLTCDARSNP 245
Score = 59.3 bits (143), Expect = 3e-09
Identities = 40/355 (11%), Positives = 72/355 (20%), Gaps = 106/355 (29%)
Query: 1267 FITEIESVTVQEAEPVRFETRVEPRVDPRLRVEC--------SLSTAFFFPFINISTAFL 1318
+ V + V ++ V S S A F S
Sbjct: 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPS---- 58
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
+ + +L SL + + ED+G Y C + +
Sbjct: 59 YSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSV---------D 109
Query: 1379 IQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV 1438
I L+ P+ T + QL
Sbjct: 110 IWLRVLAK--------------------------------PQ-------NTAEVQKVQLT 130
Query: 1439 EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYP---EDS 1495
C + G P ++ W + +P+ ++ + + P D
Sbjct: 131 GEPVPMARCV-STGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDG 189
Query: 1496 GEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVE 1555
C+ + + T + Y
Sbjct: 190 KNVTCKVEHESFEKPQLLTVNLT----VYYPP---------------------------- 217
Query: 1556 DEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIV 1608
V +S + A C P P W + V
Sbjct: 218 -------EVSISGYDNNWYLGQNEATLTC-DARSNPEPTGYNWSTTMGPLPPFAV 264
Score = 58.6 bits (141), Expect = 6e-09
Identities = 35/328 (10%), Positives = 70/328 (21%), Gaps = 99/328 (30%)
Query: 579 CRATNKWGTAMTKAKVI----CKVLTVIVEWFYNGKKLPHGHRYR--------TFHDFGI 626
C +++ + ++ V G R + +
Sbjct: 22 CYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASL 81
Query: 627 VILDILYCYEENSGVYECRA-TNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQ 685
+ + E+ G Y C T GS L+ ++K
Sbjct: 82 RMFGLR---VEDEGNYTCLFVTFPQGSRSVDIWLRVLAK--------------------- 117
Query: 686 TLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFW 745
P T + + L + P ++ W
Sbjct: 118 ---------------------PQNTAEVQKVQ-LTGEPVPMARCV-STGGRPPAQITWHS 154
Query: 746 NGKPMKTGSRFRTFCDFGFVI---LEISPVYPEDCGQYSCRAYNDYGEAVTSASMK--VQ 800
+ M S+ F + + P D +C+ ++ E ++ V
Sbjct: 155 DLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY 214
Query: 801 GKRSIILE----------------------------------SQLPKGMEVFISFHEISP 826
+ + LP + I P
Sbjct: 215 YPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRP 274
Query: 827 VYPEDCGQYSCRAYNDYGEAVTSASMKV 854
V C N G +++V
Sbjct: 275 VDKPINTTLICNVTNALGARQAELTVQV 302
Score = 57.4 bits (138), Expect = 1e-08
Identities = 32/252 (12%), Positives = 55/252 (21%), Gaps = 69/252 (27%)
Query: 919 FLTTPTDLTLAESTLAHFECRLTPTNDPSMT---VEWFHNGKAL-------SAGSRIKTI 968
+ PT + C L N + W +G++ + G
Sbjct: 3 VVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSES 62
Query: 969 NDFGFVI-----------LEINDVYLRDSGLYTCKA-TNKHGEATTSCKLTVKGRQGIDV 1016
FV L + + + D G YTC T G + L V
Sbjct: 63 KRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA------ 116
Query: 1017 EPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDC 1076
P T+++Q + + C
Sbjct: 117 ------------------------------------KPQNTAEVQK-VQLTGEPVPMARC 139
Query: 1077 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI---SLDMDYVYARDSGEYICRATN 1133
P +I W + S+V + D C+ +
Sbjct: 140 V-STGGRPPAQITWHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEH 198
Query: 1134 KWGTAMTKAKVI 1145
+ V
Sbjct: 199 ESFEKPQLLTVN 210
Score = 52.8 bits (126), Expect = 5e-07
Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
W PL + + L I + + C TN LG + T
Sbjct: 246 EPTGYNWSTTMGPLPPFAVAQGA------QLLIRPVDKPINTTLICNVTNALGARQAELT 299
Query: 67 LKI 69
+++
Sbjct: 300 VQV 302
Score = 47.8 bits (113), Expect = 2e-05
Identities = 14/93 (15%), Positives = 22/93 (23%), Gaps = 9/93 (9%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDP-NMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PP + + C +P W PLP G
Sbjct: 216 PPEVSISGYDNNWYLGQNEATLTCDAR--SNPEPTGYNWSTTMGPLPPFAVAQ-----GA 268
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ V + +C TN G + +
Sbjct: 269 Q-LLIRPVDKPINTTLICNVTNALGARQAELTV 300
Score = 46.6 bits (110), Expect = 4e-05
Identities = 19/125 (15%), Positives = 35/125 (28%), Gaps = 26/125 (20%)
Query: 1765 KISATKPLDVYWLKNGKKIIPDIRYK-----TLEEDNLFTLLIIEAVVEDSGAYECVAMN 1819
+ + + V+ G R + E +L + VED G Y C+ +
Sbjct: 41 RHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVT 100
Query: 1820 N-AGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR- 1877
G + L V +K P ++ + +C
Sbjct: 101 FPQGSRSVDIWLRVLAK-------------------PQNTAEVQKVQLTGEPVPMARCVS 141
Query: 1878 ITGKP 1882
G+P
Sbjct: 142 TGGRP 146
Score = 37.4 bits (86), Expect = 0.037
Identities = 7/33 (21%), Positives = 10/33 (30%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
L I V +C N G + T+
Sbjct: 269 QLLIRPVDKPINTTLICNVTNALGARQAELTVQ 301
Score = 30.5 bits (68), Expect = 6.1
Identities = 22/139 (15%), Positives = 34/139 (24%), Gaps = 24/139 (17%)
Query: 1055 VFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMR---IDWFFNGRP-------FATGSRVK 1104
V + V C L+ + + W +G G
Sbjct: 2 VVVQAPT-QVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYS 60
Query: 1105 TVYDFGFI-----------SLDMDYVYARDSGEYICRA-TNKWGTAMTKAKVICKAKHDI 1152
F+ SL M + D G Y C T G+ + AK
Sbjct: 61 ESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQN 120
Query: 1153 VTESQLPDSMSAEKLKELE 1171
E Q ++ E +
Sbjct: 121 TAEVQ-KVQLTGEPVPMAR 138
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold,
transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB:
1wip_A 1wiq_A 3t0e_E
Length = 363
Score = 99.9 bits (248), Expect = 3e-22
Identities = 35/298 (11%), Positives = 81/298 (27%), Gaps = 47/298 (15%)
Query: 1574 VQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGKIQERVVDA- 1632
++G+ + + W + + +++ + + + D
Sbjct: 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 65
Query: 1633 -----------------------SEKPAKPPVFTKKIQP-CRAFEQDQARFEVEFDGDPL 1668
++ + VF + +E
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSS 125
Query: 1669 PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 1728
P+++ L + Q+ ++DSG + K + ++V
Sbjct: 126 PSVQCRSPRGKN----------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 175
Query: 1729 VEEKRQG------GRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGK 1781
V ++ G V SF + + + A+ +++ K + LKN +
Sbjct: 176 VLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKE 235
Query: 1782 KIIP----DIRYKTLEEDNL-FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
+ D + + ++ L TL SG G+ E LVV
Sbjct: 236 VSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR 293
Score = 97.6 bits (242), Expect = 2e-21
Identities = 37/319 (11%), Positives = 83/319 (26%), Gaps = 74/319 (23%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L I KIED+ Y C ++ + ++ V F S L G S
Sbjct: 69 LIIKNLKIEDSDTYICEVEDQKEEVQLLV--------------FGLTANSDTHLLQGQSL 114
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
P V+ + + ++ ++ DSG + C
Sbjct: 115 TLTLESPP--GSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVL 162
Query: 488 NNF-----------IFIPPFPIFIF----HQIRLPSPSQ-DNLDVPEAGKVHFDCRLEPK 531
N + ++ Q+ P + +G++ +
Sbjct: 163 QNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASS 222
Query: 532 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD----YVYARDSGEYICRATNKWGT 587
S + D ++ + + L + SG K G
Sbjct: 223 SKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGK 282
Query: 588 AMTKAKVI------------CKVL-----TVIVEWFYNGKKLPHGHRYRTFHDFGIVILD 630
+ ++ C+V +++ K+ R +
Sbjct: 283 LHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREK----------- 331
Query: 631 ILYCYEENSGVYECRATNK 649
++ +G+++C ++
Sbjct: 332 AVWVLNPEAGMWQCLLSDS 350
Score = 88.7 bits (219), Expect = 1e-18
Identities = 49/418 (11%), Positives = 107/418 (25%), Gaps = 117/418 (27%)
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 177
V K+ + V C ++ W ++ + N+ +
Sbjct: 4 VLGKKGDTVELTCTAS-------------------QKKSIQFHWKNSNQIKILGNQGSFL 44
Query: 178 SDFGFVVMD-----------------IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHD 220
+ + D I ++ DS Y+C+ V ++ + +
Sbjct: 45 TKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE--VEDQK----EEVQLLVF 98
Query: 221 FGYVALDIELML-KTLV----------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVG 269
D L+ ++L P + G K L +
Sbjct: 99 GLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQ 148
Query: 270 AYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQ-------------- 315
+DSG +T ++ + V S+ ++
Sbjct: 149 LELQDSGTWTCTVLQNQKKVEFKIDIV------VLAFQKASSIVYKKEGEQVEFSFPLAF 202
Query: 316 HLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKI 375
+ L+ ++A +T + ++ + + + L + +
Sbjct: 203 TVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQA 262
Query: 376 ----EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
+G T K G+ VNL V ++ T C
Sbjct: 263 LPQYAGSGNLTLALEAKTGKLHQEVNLV-VMRATQLQKNLT------------------C 303
Query: 432 TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+ P+L + K R K V V + ++G + C ++
Sbjct: 304 EVWGPTSPKLMLSLKLENKEAKVSKREKAVW-----------VLNPEAGMWQCLLSDS 350
Score = 85.2 bits (210), Expect = 2e-17
Identities = 42/348 (12%), Positives = 102/348 (29%), Gaps = 75/348 (21%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I EDS Y + + K +F L ++L +G+
Sbjct: 69 LIIKNLKIEDSDTYICEVEDQKEEVQL----------------LVFGLTANSDTHLLQGQ 112
Query: 325 IAHF--EASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYT 382
E+ + +V+ + L + +++D+G +T
Sbjct: 113 SLTLTLESP----PGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWT 158
Query: 383 CRATNKWGQAEISVNL---------ECVDKSKGQPPKFTSHIK-SLEGLKDGDSAHFECT 432
C + E +++ V K +G+ +F+ + ++E L ++
Sbjct: 159 CTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAE 218
Query: 433 LTPVNDPELKVEWFHNGKPIF--HKNRVKMVSDFGFVVMDI--AYVQSHDSGEYVCRAWN 488
+ + + + + ++ + + + + A Q SG
Sbjct: 219 RASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEA 278
Query: 489 NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEA--GKVHFDCRLEPKSDPTMRIDWFFNGRP 546
+ NL V A + + C + + P + + +
Sbjct: 279 KTG---------------KLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKE 323
Query: 547 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 594
R K V +V ++G + C ++ G + ++ +
Sbjct: 324 AKVSKREKAV-----------WVLNPEAGMWQCLLSDS-GQVLLESNI 359
Score = 79.1 bits (194), Expect = 2e-15
Identities = 47/403 (11%), Positives = 104/403 (25%), Gaps = 77/403 (19%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD------------- 470
GD+ CT + ++ W ++ + N+ ++ + D
Sbjct: 9 GDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGN 66
Query: 471 ----IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
I ++ DS Y+C + + + + + + +
Sbjct: 67 FPLIIKNLKIEDSDTYICEVED--------QKEEVQLLVFGLTANSDTHLLQGQSLTLTL 118
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
P S P+ + G + +L + + +DSG + C
Sbjct: 119 ESPPGSSPS--VQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQK 166
Query: 587 TAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRA 646
K ++V F + + + + ++
Sbjct: 167 KVEFKI-------DIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAER 219
Query: 647 TNKYGSDVT---KASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAH-------LRRT 696
+ S +T K V + + Q+ + + L Q L A L
Sbjct: 220 ASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAK 279
Query: 697 ETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRF 756
+ V + + PKL + K K R
Sbjct: 280 TGKLHQEVNLVVMRAT---------QLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKR- 329
Query: 757 RTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
+ V + G + C + G+ + +++KV
Sbjct: 330 ----------EKAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361
Score = 74.8 bits (183), Expect = 6e-14
Identities = 35/307 (11%), Positives = 81/307 (26%), Gaps = 42/307 (13%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
Q VF + ++ L +G++ P V+ G +
Sbjct: 94 QLLVFGLTANSDTHLLQGQSLTLTLESPP--GSSPSVQCRSPRGKNIQGGK--------- 142
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFH-E 823
L +S + +D G ++C + + + V + +G +V SF
Sbjct: 143 -TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLA 201
Query: 824 ISPVYPEDCGQYSCRAY-NDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEG 882
+ G+ +A ++ + +K + + M + L
Sbjct: 202 FTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ 261
Query: 883 YGHEREDRTIDK-IAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLT 941
+ E + GK + + + C +
Sbjct: 262 ALPQYAGSGNLTLALEAK-------------TGKL-HQEVNLVVMRATQLQK-NLTCEVW 306
Query: 942 PTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEAT 1001
P + + K R + V ++G++ C ++ G+
Sbjct: 307 GPTSPKLMLSLKLENKEAKVSKR-----------EKAVWVLNPEAGMWQCLLSDS-GQVL 354
Query: 1002 TSCKLTV 1008
+ V
Sbjct: 355 LESNIKV 361
Score = 73.3 bits (179), Expect = 2e-13
Identities = 32/230 (13%), Positives = 61/230 (26%), Gaps = 43/230 (18%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEIN 979
LT +D L + P S +V+ G + L ++
Sbjct: 100 LTANSDTHLLQGQSLTLTLESPP--GSSPSVQCRSPRGKNIQGGKT----------LSVS 147
Query: 980 DVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALY 1039
+ L+DSG +TC + + V F A+ + K E
Sbjct: 148 QLELQDSGTWTCTVLQNQKKVEFKIDIVVLA-------------FQKASSIVYKKEGE-- 192
Query: 1040 RKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT 1099
E P FT + + +G++ + S + D
Sbjct: 193 -------QVEFSFPLAFTVE-----KLTGSGELWWQAERASSSKSWITFDLKNKEVSVKR 240
Query: 1100 GSRVKTVYDFGFISLDMD----YVYARDSGEYICRATNKWGTAMTKAKVI 1145
++ + + L + SG K G + ++
Sbjct: 241 VTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLV 290
Score = 72.1 bits (176), Expect = 4e-13
Identities = 34/250 (13%), Positives = 65/250 (26%), Gaps = 52/250 (20%)
Query: 1651 AFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI-------------- 1696
+ D W + T +
Sbjct: 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 65
Query: 1697 ---LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV 1753
LI++ + +EDS + E++ + + + LT S
Sbjct: 66 NFPLIIKNLKIEDSDTYICEVEDQKEEVQ------------------LLVFGLTANSDTH 107
Query: 1754 INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAY 1813
+ GQ + V K I + TL + + ++DSG +
Sbjct: 108 LLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTW 157
Query: 1814 ECVAMNNAGEARCEAELVVQS-KKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAV 1872
C + N + + ++VV + +KA G V + PL K +
Sbjct: 158 TCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQV------EFSFPLAFTVEKLTGSG 211
Query: 1873 TLKCRITGKP 1882
L +
Sbjct: 212 ELWWQAERAS 221
Score = 68.3 bits (166), Expect = 7e-12
Identities = 36/344 (10%), Positives = 79/344 (22%), Gaps = 86/344 (25%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT-----------------FCDF 762
++G+ T + ++ W + + G++ D
Sbjct: 7 KKGDTVELTC--TASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQ 64
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ------------ 810
G L I + ED Y C + E + +L+ Q
Sbjct: 65 GNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGS 124
Query: 811 -------LPKGMEVFISFH-EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL 862
P+G + +S + +D G ++C + + + V +
Sbjct: 125 SPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASS 184
Query: 863 ESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTT 922
+G + F
Sbjct: 185 IVYKKEGEQVEFS-------------------------------------------FPLA 201
Query: 923 PTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF----GFVILEI 978
T L S ++ ++ +T + + ++ ++ + + L
Sbjct: 202 FTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ 261
Query: 979 NDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSA 1022
SG T K G+ L V +
Sbjct: 262 ALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEV 305
Score = 67.1 bits (163), Expect = 2e-11
Identities = 47/451 (10%), Positives = 97/451 (21%), Gaps = 160/451 (35%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRI-----------------RSTFDFGLVTLSINSLRA 44
+++ W + LG++ RS +D G L I +L+
Sbjct: 17 TASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKI 76
Query: 45 DDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPEL 104
+DS Y C+ + + +EV+ L
Sbjct: 77 EDSDTYICEVED------------------------------------QKEEVQL----L 96
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
VF +D + +++ P V+
Sbjct: 97 VFGLTAN----SDTHLLQGQSLTLTLESPP-------------------GSSPSVQCRSP 133
Query: 165 GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ----------------WFVNNKP 208
+ + ++ ++ DSG + C
Sbjct: 134 RGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS 183
Query: 209 LPAGAKFKTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAK-----------FKTT 257
K +F + L + T W + T
Sbjct: 184 SIVYKKEGEQVEFSFP-LAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVT 242
Query: 258 HDFGYVA---------LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYP 308
D L SG T+ G L +
Sbjct: 243 QDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMR--------- 293
Query: 309 LFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVL 368
+ + + + + K + S R
Sbjct: 294 ------------ATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKR-----------E 330
Query: 369 EILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+ + + G++ C ++ GQ + N++
Sbjct: 331 KAVWVLNPEAGMWQCLLSDS-GQVLLESNIK 360
Score = 66.4 bits (161), Expect = 3e-11
Identities = 40/392 (10%), Positives = 96/392 (24%), Gaps = 101/392 (25%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-----------------DFGFISL 564
V C +++ W + + G++ + D G L
Sbjct: 12 VELTC--TASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPL 69
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTK-----------------AKVICKVL---TVIVE 604
+ + DS YIC ++ + + + V+
Sbjct: 70 IIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQ 129
Query: 605 WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSK 664
K G + L + ++SG + C K + ++
Sbjct: 130 CRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAF 179
Query: 665 TNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGEN 724
EG + F+ PL + +
Sbjct: 180 QKASSIVYKKEG----------------------------EQVEFSFPL-AFTVEKLTGS 210
Query: 725 AHFEARLTPTDDPKLKVEWFWNGK-----PMKTGSRFRTFCDFGFVI-LEISPVYPEDCG 778
+ K + + K + + + + L + G
Sbjct: 211 GELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSG 270
Query: 779 QYSCRAYNDYGEAVTSASMKVQ----GKRSIILESQLPKGMEVFISF------------H 822
+ G+ ++ V ++++ E P ++ +S
Sbjct: 271 NLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAKVSKRE 330
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
+ V + G + C + G+ + +++KV
Sbjct: 331 KAVWVLNPEAGMWQCLLSDS-GQVLLESNIKV 361
Score = 62.9 bits (152), Expect = 4e-10
Identities = 44/438 (10%), Positives = 100/438 (22%), Gaps = 132/438 (30%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW----------- 1489
+ + C +++ W + + N+ + + G +N
Sbjct: 10 DTVELTCT--ASQKKSIQFHWKNSNQIKILGNQGSFLTK-GPSKLNDRADSRRSLWDQGN 66
Query: 1490 -------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+ EDS Y+C + + + T
Sbjct: 67 FPLIIKNLKIEDSDTYICEVEDQKEEVQLL-VFGLTANSDT------------------- 106
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
+ +G+ P V
Sbjct: 107 ------------------------------HLLQGQSLTLTLESPPGSSPSVQCRSPRGK 136
Query: 1603 IVNE----IVRKITAT---------ETTEMEHKGKIQERVVDASEKPAKPPV-------- 1641
+ V ++ + + + KI V+ + +
Sbjct: 137 NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEF 196
Query: 1642 -FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMR 1700
F + + ++ E I + ++ ++ Q L +
Sbjct: 197 SFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLH 256
Query: 1701 ------QVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVI 1754
SG + E + GK NLVV Q LT
Sbjct: 257 LTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQ-------LQKNLTCEVWG-- 307
Query: 1755 NVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYE 1814
+ L + K+ R K + + ++G ++
Sbjct: 308 ------------PTSPKLMLSLKLENKEAKVSKREK-----------AVWVLNPEAGMWQ 344
Query: 1815 CVAMNNAGEARCEAELVV 1832
C+ +++G+ E+ + V
Sbjct: 345 CLL-SDSGQVLLESNIKV 361
Score = 58.3 bits (140), Expect = 1e-08
Identities = 25/229 (10%), Positives = 54/229 (23%), Gaps = 82/229 (35%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIN-----------------DFGFVIL 976
C T + S+ W ++ + G++ + D G L
Sbjct: 12 VELTC--TASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPL 69
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
I ++ + DS Y C+ ++ E + +
Sbjct: 70 IIKNLKIEDSDTYICEVEDQKEEVQL-----------LVFGLTAN--------------- 103
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 1096
+ + Q + P S P+ +
Sbjct: 104 --------------SDTHLLQGQ-----------SLTLTLESPPGSSPS--VQCRSPRGK 136
Query: 1097 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
G + +L + + +DSG + C K ++
Sbjct: 137 NIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 175
Score = 52.5 bits (125), Expect = 7e-07
Identities = 21/145 (14%), Positives = 36/145 (24%), Gaps = 44/145 (30%)
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLE-----------------EDNLF 1798
G S K + +W + + I + L + F
Sbjct: 8 KGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNF 67
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L+I +EDS Y C + E + LV
Sbjct: 68 PLIIKNLKIEDSDTYICEVEDQKEEVQL---LVFGLTANS-------------------- 104
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
D ++ +G ++TL
Sbjct: 105 ----DTHLLQGQSLTLTLESPPGSS 125
Score = 48.3 bits (114), Expect = 2e-05
Identities = 28/300 (9%), Positives = 74/300 (24%), Gaps = 54/300 (18%)
Query: 1272 ESVTVQEAEPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINISTAFLIFNFCLHAVI 1328
+ V ++ + V + + F+ + L +
Sbjct: 2 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSL 61
Query: 1329 FSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK-----------------ATI 1371
+ F L I + ED Y+C + E T+
Sbjct: 62 WDQGNF-----PLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTL 116
Query: 1372 SCKK----IPTIQLQNQVPKGMLKTEAL----IQMEAA----------IKKYTSEIYLTE 1413
+ + P++Q ++ K + + L ++++ + KK +I +
Sbjct: 117 TLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVV 176
Query: 1414 DDLYEPEKKQPPRFVTQIK-------TQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGK 1466
+ + Q++ T ++L ++ + A + +
Sbjct: 177 LAFQKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEV 236
Query: 1467 PLPHKNRFNPIYDFGYVAMNF----GWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
+ + + + ++ SG G L
Sbjct: 237 SVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQ 296
Score = 46.7 bits (110), Expect = 5e-05
Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 70/221 (31%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS--------------------CKKIPTI 1379
+L + + +D G + C + + K I
Sbjct: 143 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAF 202
Query: 1380 QLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRF-----------V 1428
++ G L +A A+ K L ++ Q P+ +
Sbjct: 203 TVEKLTGSGELWWQA---ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTL 259
Query: 1429 TQIKTQD---------------------QLVEMQSTK----FECQLAPVGDPNMKVEWFL 1463
Q Q LV M++T+ C++ P + + L
Sbjct: 260 PQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKL 319
Query: 1464 NGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATN 1504
K R + WV ++G + C ++
Sbjct: 320 ENKEAKVSKREKAV-----------WVLNPEAGMWQCLLSD 349
Score = 34.8 bits (79), Expect = 0.23
Identities = 9/74 (12%), Positives = 26/74 (35%), Gaps = 12/74 (16%)
Query: 1071 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 1130
+ + C + + P + + + R K V +V ++G + C
Sbjct: 298 QKNLTCEVWGPTSPKLMLSLKLENKEAKVSKREKAV-----------WVLNPEAGMWQCL 346
Query: 1131 ATNKWGTAMTKAKV 1144
++ G + ++ +
Sbjct: 347 LSDS-GQVLLESNI 359
Score = 33.2 bits (75), Expect = 0.80
Identities = 12/122 (9%), Positives = 36/122 (29%), Gaps = 2/122 (1%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFE-TRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
++ + + E V+ + P+ F ++ + + E + S+ + F + +
Sbjct: 180 QKASSIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVK 239
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
+ L ++L G G+ + + + +Q
Sbjct: 240 RVTQDPKLQMGKKLPL-HLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRATQLQ 298
Query: 1381 LQ 1382
Sbjct: 299 KN 300
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis,
ATP-binding, developmental protein, differentiation,
glycoprotein; 2.70A {Homo sapiens}
Length = 108
Score = 92.0 bits (229), Expect = 4e-22
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 4/97 (4%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
AP + T + C + +P + WF + + L S I +
Sbjct: 10 APTITGNLENQTTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--N 65
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQ 1012
L I V D GLYTC+A + G A ++G Q
Sbjct: 66 LTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQ 102
Score = 90.9 bits (226), Expect = 1e-21
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
V P+ + + ++G+ S P + W K+ + ++ D +D L
Sbjct: 9 VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVL--KDGNRNL 66
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
I ED G Y C A + G A+ EA +++ +
Sbjct: 67 TIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQEK 104
Score = 88.5 bits (220), Expect = 6e-21
Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
P T ++ + G+P P I WF+++ + + L
Sbjct: 10 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLT 67
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 1734
+R+V ED G++ A + G AK A ++E ++
Sbjct: 68 IRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQE 103
Score = 77.8 bits (192), Expect = 5e-17
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 5/98 (5%)
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
R AP T L N GE+ + +P ++ WF + + + S G
Sbjct: 8 RVAPTITGNLENQT-TSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVL--KDG 62
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L I V ED G Y+C+A + G A A ++G
Sbjct: 63 NRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEG 100
Score = 73.5 bits (181), Expect = 1e-15
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+P +I WFK+ L S I G L+I +R +D +YTC+A ++LG A
Sbjct: 35 SGNPPPQIMWFKDNETLVEDSGIV--LKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKV 92
Query: 64 TCTLKIE 70
IE
Sbjct: 93 EAFFIIE 99
Score = 66.6 bits (163), Expect = 3e-13
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P + ++Q + +S + C + G+P ++ WF + + L + + G
Sbjct: 10 APTITGNL--ENQTTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGI--VLKDGN 63
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ V ED G Y C+A ++ G + A G
Sbjct: 64 RNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQ 102
Score = 65.4 bits (160), Expect = 8e-13
Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 5/93 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P T L++ + C +P +I WF + S +
Sbjct: 10 APTITGNLEN-QTTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR-- 64
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+L + V D G Y C+A + G A +A I
Sbjct: 65 NLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI 97
Score = 63.1 bits (154), Expect = 5e-12
Identities = 16/81 (19%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P T ++++ G+S CT + +P ++ WF + + + + + + +
Sbjct: 10 APTITGNLENQT-TSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNRNL 66
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
I V+ D G Y C+A +
Sbjct: 67 T--IRRVRKEDEGLYTCQACS 85
Score = 57.7 bits (140), Expect = 4e-10
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 21/98 (21%)
Query: 104 LVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
L +P +L + E++ C G +P ++ WF
Sbjct: 6 LERVAPTITGNLENQTTSIGESIEVSCTAS---------G----------NPPPQIMWFK 46
Query: 164 NGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + + + + + + I V+ D G Y CQ
Sbjct: 47 DNETLVEDSGIVLKDGNRNLT--IRRVRKEDEGLYTCQ 82
Score = 57.0 bits (138), Expect = 9e-10
Identities = 18/128 (14%), Positives = 31/128 (24%), Gaps = 51/128 (39%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRV----EPRV-----------DPRLRVECSLST 1304
+ P +E+ T E + P++ D + ++
Sbjct: 6 LERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRN 65
Query: 1305 AFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
L I V ED+G Y C+A + G
Sbjct: 66 ------------------------------------LTIRRVRKEDEGLYTCQACSVLGC 89
Query: 1365 AFTKATIS 1372
A +A
Sbjct: 90 AKVEAFFI 97
Score = 57.0 bits (138), Expect = 9e-10
Identities = 18/83 (21%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
N + C +P +I WF + S + +L + V
Sbjct: 19 NQTTSIGESIEVSCTAS--GNPPPQIMWFKDNETLVEDSGIVLKDGNR--NLTIRRVRKE 74
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D G Y C+A + G A +A I
Sbjct: 75 DEGLYTCQACSVLGCAKVEAFFI 97
Score = 56.2 bits (136), Expect = 2e-09
Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P WF +N+ L + G L I ED G+YT +A + G A
Sbjct: 40 PQIMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI 97
Score = 55.8 bits (135), Expect = 2e-09
Identities = 13/60 (21%), Positives = 21/60 (35%)
Query: 1558 KPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
+ AP E Q GE +G P P++MW + T+V + +
Sbjct: 6 LERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLKDGNRN 65
Score = 53.5 bits (129), Expect = 1e-08
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P + +L N + GE + G+ + + + + + I G
Sbjct: 11 PTIT---GNLENQTTSIGESIEVSCTA--SGNPPPQIMWFKDNETLVEDSGIVLKD--GN 63
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
L I + ED G+YTC+A + G A++ ++ + T+
Sbjct: 64 RNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI-IE----GAQEKTN 106
Score = 50.0 bits (120), Expect = 2e-07
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ WF + + L G L I +E+ G+Y C+A + G +A
Sbjct: 42 IMWFKDNETLVEDSGIVLKD--GNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFI 97
Score = 46.9 bits (112), Expect = 3e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
I V ED G Y+C+A + G A A ++G
Sbjct: 67 TIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEG 100
Score = 43.9 bits (104), Expect = 4e-05
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 1849 VAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
V + APT+ L++Q G ++ + C +G P
Sbjct: 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNP 38
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U
twenty twenty, neurogenesis, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 118
Score = 91.8 bits (228), Expect = 6e-22
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P P + T+A C T P T+ W +G +S + G +
Sbjct: 8 PPVIRQGPVNQTVAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENG--V 63
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
L+I L D+G YTC A+ GEAT S + V+ P+ +
Sbjct: 64 LQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPT 109
Score = 80.2 bits (198), Expect = 9e-18
Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 2/104 (1%)
Query: 1735 GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEE 1794
G G PP + + V + + + W K+G + E
Sbjct: 1 GSSGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE 60
Query: 1795 DNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+ L I A + D+G Y C+A +GEA A + VQ P
Sbjct: 61 NG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVP 102
Score = 74.0 bits (182), Expect = 1e-15
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 4/102 (3%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD-FQIHT 1690
S + PPV + G P+PTI W ++ +++ +
Sbjct: 1 GSSGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLE 60
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L +R + D+G + IA G+A SA + V+E
Sbjct: 61 NGV---LQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEF 99
Score = 68.6 bits (168), Expect = 9e-14
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 5/105 (4%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
PV N + T P + W +G + T + G
Sbjct: 8 PPVIRQGPVNQT-VAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENG-- 62
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 810
+L+I D G+Y+C A GEA SA ++VQ + +
Sbjct: 63 VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPR 107
Score = 66.7 bits (163), Expect = 5e-13
Identities = 25/108 (23%), Positives = 34/108 (31%), Gaps = 5/108 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PPV N V G C P I W +G +T + G
Sbjct: 8 PPVIRQGPV-NQTVAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENG-- 62
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPD 1160
L + Y D+G Y C A+ G A A + + V + D
Sbjct: 63 VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 65.2 bits (159), Expect = 1e-12
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
P I W K+GV +S + G L I + D+ YTC A+ GEA +
Sbjct: 35 SPVPTILWRKDGVLVSTQDSRIKQLENG--VLQIRYAKLGDTGRYTCIASTPSGEATWSA 92
Query: 66 TLKIEDR 72
+++++
Sbjct: 93 YIEVQEF 99
Score = 61.7 bits (150), Expect = 3e-11
Identities = 24/111 (21%), Positives = 34/111 (30%), Gaps = 12/111 (10%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P+ P N V G C P I W +G +T
Sbjct: 6 SGPPVIRQG------PV--NQTVAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSR 55
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
+ G L + Y D+G Y C A+ G A A + + V V+
Sbjct: 56 IKQLENG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQ 104
Score = 57.9 bits (140), Expect = 6e-10
Identities = 18/102 (17%), Positives = 33/102 (32%), Gaps = 7/102 (6%)
Query: 1424 PPRFVTQIKTQDQLVEMQST-KFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PP +Q V + T C G P + W +G + ++ + G
Sbjct: 8 PPVIR--QGPVNQTVAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENG- 62
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGII 1524
+ + D+G Y C A+ G A ++ +
Sbjct: 63 -VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPV 103
Score = 55.9 bits (135), Expect = 3e-09
Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 5/81 (6%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
PP + + + C P + W +G + ++ + G
Sbjct: 8 PPVIRQGPVNQT-VAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENG-- 62
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
V+ I Y + D+G Y C A
Sbjct: 63 VLQIRYAKLGDTGRYTCIAST 83
Score = 55.2 bits (133), Expect = 4e-09
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 6/107 (5%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P+ + + ++ G T+ + +G + G+
Sbjct: 9 PVIRQGPVNQT-VAVDGTFVLSCV--ATGSPVPTILWRKDGVLVSTQDSRIKQLENGV-- 63
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG-QPPKFTS 413
L+I K+ DTG YTC A+ G+A S +E + QPP+ T
Sbjct: 64 LQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTD 110
Score = 50.9 bits (122), Expect = 1e-07
Identities = 13/50 (26%), Positives = 18/50 (36%), Gaps = 2/50 (4%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVR 1609
PV P Q V C TG P P ++W +G + + R
Sbjct: 7 GPPVIRQGPVNQTVAVDGTFVLSC-VATGSPVPTILWRKDGVLVSTQDSR 55
Score = 50.9 bits (122), Expect = 1e-07
Identities = 15/92 (16%), Positives = 26/92 (28%), Gaps = 21/92 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
PV + + C G P + W +G +
Sbjct: 9 PVIRQGPVNQTVAVDGTFVLSCVAT---------G----------SPVPTILWRKDGVLV 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
++ + G V+ I Y + D+G Y C
Sbjct: 50 STQDSRIKQLENG--VLQIRYAKLGDTGRYTC 79
Score = 48.6 bits (116), Expect = 8e-07
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W + + + G L I A D+G YT A+ G AT S +
Sbjct: 38 PTILWRKDGVLVSTQDSRIKQLENG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYI 94
Score = 46.7 bits (111), Expect = 4e-06
Identities = 21/117 (17%), Positives = 29/117 (24%), Gaps = 21/117 (17%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNF 1322
PP + TV P + + + +ST
Sbjct: 7 GPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTIL--------WRKDGVLVSTQDSRIK- 57
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
+ G L I Y D G Y C A GEA A I ++
Sbjct: 58 ----------QLENG--VLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVP 102
Score = 46.7 bits (111), Expect = 5e-06
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W +G + + G+ L I Y ++G Y C A+ G A +
Sbjct: 40 ILWRKDGVLVSTQDSRIKQLENGV--LQIRYAKLGDTGRYTCIASTPSGEATWSAYI 94
Score = 45.9 bits (109), Expect = 9e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 865
+I D G+Y+C A GEA SA ++VQ + +
Sbjct: 65 QIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPR 107
Score = 41.3 bits (97), Expect = 3e-04
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 1847 AAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ P + + +Q V L C TG P
Sbjct: 1 GSSGSSGPPVIRQGPVNQTVAVDGTFVLSCVATGSPV 37
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type
myosin-binding protein C, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 100
Score = 91.2 bits (227), Expect = 7e-22
Identities = 19/95 (20%), Positives = 31/95 (32%), Gaps = 6/95 (6%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
+ LT TD T+ +C ++ + +W NG + R+K +
Sbjct: 6 SGLKILTPLTDQTVNLGKEICLKCEISE--NI--PGKWTKNGLPVQESDRLKVVQKGRIH 61
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
L I + D G Y T K+ V
Sbjct: 62 KLVIANALTEDEGDYVFAPDA--YNVTLPAKVHVI 94
Score = 82.8 bits (205), Expect = 6e-19
Identities = 11/95 (11%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
+ + + + E + KW + P+ S ++
Sbjct: 5 SSGLKILTPLTDQTVNLGKEICLKCEISENI--PGKWTKNGLPVQESDRLKVVQKGRIHK 62
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
L++ ED G + + A + V
Sbjct: 63 LVIANALTEDEGDYVFAPDA--YNVTLPAKVHVIS 95
Score = 81.2 bits (201), Expect = 2e-18
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEED 1795
G G LT ++ +N+G+ +IS P W KNG + R K +++
Sbjct: 1 GSSGSSGLKILTPLTDQTVNLGKEICLKCEISENIP--GKWTKNGLPVQESDRLKVVQKG 58
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPG 1839
+ L+I A+ ED G Y +A A++ V S + G
Sbjct: 59 RIHKLVIANALTEDEGDYVFA--PDAYNVTLPAKVHVISGPSSG 100
Score = 71.2 bits (175), Expect = 7e-15
Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 7/95 (7%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
PL++ + G+ + ++ + +W NG P++ R +
Sbjct: 7 GLKILTPLTDQT-VNLGKEICLKCEISE--NIP--GKWTKNGLPVQESDRLKVVQKGRIH 61
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L I+ ED G Y D A + V
Sbjct: 62 KLVIANALTEDEGDYVFA--PDAYNVTLPAKVHVI 94
Score = 70.8 bits (174), Expect = 8e-15
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
S K + + + G +C ++ + +W NG P+ +R+K+V
Sbjct: 3 SGSSGLKILTPLTDQT-VNLGKEICLKCEISE--NIP--GKWTKNGLPVQESDRLKVVQK 57
Query: 464 FGFVVMDIAYVQSHDSGEYVCRA 486
+ IA + D G+YV
Sbjct: 58 GRIHKLVIANALTEDEGDYVFAP 80
Score = 67.0 bits (164), Expect = 2e-13
Identities = 18/95 (18%), Positives = 34/95 (35%), Gaps = 22/95 (23%)
Query: 107 DSPV-FISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
S + ++ L D + + C + S++ +W NG
Sbjct: 5 SSGLKILTPLTDQTVNLGKEICLKCEI--SENIP-------------------GKWTKNG 43
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
P+ +R+K+V + IA + D G+YV
Sbjct: 44 LPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVF 78
Score = 65.0 bits (159), Expect = 1e-12
Identities = 19/93 (20%), Positives = 27/93 (29%), Gaps = 5/93 (5%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
+ L D V ++ C + W NG P R+K V
Sbjct: 7 GLKILTPLTD-QTVNLGKEICLKCEISENIPGK----WTKNGLPVQESDRLKVVQKGRIH 61
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + D G+Y+ T K VI
Sbjct: 62 KLVIANALTEDEGDYVFAPDAYNVTLPAKVHVI 94
Score = 60.4 bits (147), Expect = 4e-11
Identities = 11/68 (16%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
N+ +W KNG+P+ R++ + L I + +D Y
Sbjct: 30 EISENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA--YNVTL 87
Query: 64 TCTLKIED 71
+ +
Sbjct: 88 PAKVHVIS 95
Score = 58.9 bits (143), Expect = 1e-10
Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 9/100 (9%)
Query: 1424 PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ +T + DQ V + +C+++ + +W NG P+ +R +
Sbjct: 7 GLKILTPL--TDQTVNLGKEICLKCEIS--ENI--PGKWTKNGLPVQESDRLKVVQKGRI 60
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
+ ED G+Y+ A + P
Sbjct: 61 HKLVIANALTEDEGDYVFAPDA--YNVTLPAKVHVISGPS 98
Score = 57.0 bits (138), Expect = 7e-10
Identities = 16/91 (17%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 312 LQF-QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVL 368
L+ L++ + G+ + + + ++ NG P++ S R++ V + L
Sbjct: 8 LKILTPLTDQTVNLGKEICLKCEISE----NIPGKWTKNGLPVQESDRLKVVQKGRIHKL 63
Query: 369 EILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
I ED G Y V++
Sbjct: 64 VIANALTEDEGDYVFAPDAYNVTLPAKVHVI 94
Score = 56.6 bits (137), Expect = 8e-10
Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 4/83 (4%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V ++ C + W NG P R+K V L +
Sbjct: 16 DQTVNLGKEICLKCEISENIPGK----WTKNGLPVQESDRLKVVQKGRIHKLVIANALTE 71
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D G+Y+ T K VI
Sbjct: 72 DEGDYVFAPDAYNVTLPAKVHVI 94
Score = 50.4 bits (121), Expect = 1e-07
Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
+W N P+ + K L I A ED G Y + T + +
Sbjct: 38 KWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA--YNVTLPAKVHVIS 95
Score = 48.9 bits (117), Expect = 5e-07
Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 596 CKVL-TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDV 654
C++ + +W NG + R + I L I E+ G Y +
Sbjct: 29 CEISENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDA--YNVT 86
Query: 655 TKASLK 660
A +
Sbjct: 87 LPAKVH 92
Score = 45.8 bits (109), Expect = 6e-06
Identities = 14/120 (11%), Positives = 32/120 (26%), Gaps = 29/120 (24%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPR-LR--VECSLSTAFFFPFINISTAFL 1318
+ +T + TV + + + + + + + + + S
Sbjct: 5 SSGLKILTPLTDQTVNLGKEICLKCEISENIPGKWTKNGLP-----------VQESDRLK 53
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
+ + L I ED+G+YV D A + P+
Sbjct: 54 V-------------VQKGRIHKLVIANALTEDEGDYVFA--PDAYNVTLPAKVHVISGPS 98
Score = 43.1 bits (102), Expect = 4e-05
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ + PL DQ V G + LKC I+
Sbjct: 3 SGSSGLKILTPLTDQTVNLGKEICLKCEISENI 35
Score = 40.8 bits (96), Expect = 3e-04
Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 10/65 (15%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEME 1620
++ Q V G+ ++ + W NG + ++ ++
Sbjct: 6 SGLKILTPLTDQTVNLGKEICLKCEISENIPGK--WTKNG--------LPVQESDRLKVV 55
Query: 1621 HKGKI 1625
KG+I
Sbjct: 56 QKGRI 60
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 103
Score = 90.8 bits (226), Expect = 9e-22
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + P K ++ + E P + W ++ I S + +
Sbjct: 1 GSSGSSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAIRKSQKYDVVCE 59
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
T ++L++R ++D+G + E +K +A+L VEEK
Sbjct: 60 GTMAMLVIRGASLKDAGEYTCEVEA----SKSTASLHVEEK 96
Score = 87.0 bits (216), Expect = 2e-20
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
P + + + + G+ ++S V+WLK+ K I +Y + E + L+
Sbjct: 8 PAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLV 66
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
I A ++D+G Y C ++ A L V+ K +
Sbjct: 67 IRGASLKDAGEYTCE----VEASKSTASLHVEEKASG 99
Score = 84.7 bits (210), Expect = 1e-19
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
+ D +A C L+ P V W + KA+ + + + +L
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCELSRAGTP---VHWLKDRKAIRKSQKYDVVCEGTMAML 65
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
I L+D+G YTC+ + ++ L V+ +
Sbjct: 66 VIRGASLKDAGEYTCEVEA----SKSTASLHVEEK 96
Score = 73.5 bits (181), Expect = 1e-15
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
PL + + GE+ L+ P V W + K ++ ++ C+ +
Sbjct: 9 AAIIKPLEDQW-VAPGEDVELRCELSRAGTP---VHWLKDRKAIRKSQKYDVVCEGTMAM 64
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L I +D G+Y+C + ++AS+ V+ K
Sbjct: 65 LVIRGASLKDAGEYTCEV----EASKSTASLHVEEK 96
Score = 69.3 bits (170), Expect = 4e-14
Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 4/81 (4%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P ++ + G+ C L+ P V W + K I + +V +
Sbjct: 8 PAAIIKPLEDQW-VAPGEDVELRCELSRAGTP---VHWLKDRKAIRKSQKYDVVCEGTMA 63
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
++ I D+GEY C
Sbjct: 64 MLVIRGASLKDAGEYTCEVEA 84
Score = 63.1 bits (154), Expect = 5e-12
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
I L D E+V C + + V W + K I
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCEL--------------------SRAGTPVHWLKDRKAI 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ +V + ++ I D+GEY C+
Sbjct: 49 RKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCE 81
Score = 61.9 bits (151), Expect = 1e-11
Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 4/86 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P L+D V V C L S + W + + + V +
Sbjct: 8 PAAIIKPLED-QWVAPGEDVELRCEL---SRAGTPVHWLKDRKAIRKSQKYDVVCEGTMA 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTA 1138
L + +D+GEY C TA
Sbjct: 64 MLVIRGASLKDAGEYTCEVEASKSTA 89
Score = 61.5 bits (150), Expect = 2e-11
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ W K+ + + + + L I D+ YTC+ + ST
Sbjct: 34 RAGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA----SKSTA 89
Query: 66 TLKIEDR 72
+L +E++
Sbjct: 90 SLHVEEK 96
Score = 58.9 bits (143), Expect = 1e-10
Identities = 14/98 (14%), Positives = 34/98 (34%), Gaps = 8/98 (8%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
P + ++ Q + + + C+ + V W + K + +++ + +
Sbjct: 8 PAAIIKPLEDQ-WVAPGEDVELRCE---LSRAGTPVHWLKDRKAIRKSQKYDVVCEGTMA 63
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ +D+GEY C ++ A L K
Sbjct: 64 MLVIRGASLKDAGEYTCEVEA----SKSTASLHVEEKA 97
Score = 58.5 bits (142), Expect = 2e-10
Identities = 20/92 (21%), Positives = 30/92 (32%), Gaps = 8/92 (8%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
+ L + GE + V +L + K I S + V M
Sbjct: 9 AAII---KPLEDQWVAPGEDVELRCE---LSRAGTPVHWLKDRKAIRKSQKYDVVCEGTM 62
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+L I G ++D G YTC A + V
Sbjct: 63 AMLVIRGASLKDAGEYTCEVEASKSTASLHVE 94
Score = 55.4 bits (134), Expect = 2e-09
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W + K + K+ + L I GA +D+G YT + SK +A+
Sbjct: 40 HWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEASKSTAS 90
Score = 51.9 bits (125), Expect = 4e-08
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 3/76 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ V V C L S + W + + + V + L + +
Sbjct: 17 DQWVAPGEDVELRCEL---SRAGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLK 73
Query: 573 DSGEYICRATNKWGTA 588
D+GEY C TA
Sbjct: 74 DAGEYTCEVEASKSTA 89
Score = 48.1 bits (115), Expect = 1e-06
Identities = 9/50 (18%), Positives = 19/50 (38%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
V W + K + +Y + + +L I +++G Y C +
Sbjct: 39 VHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEASKST 88
Score = 46.5 bits (111), Expect = 3e-06
Identities = 16/109 (14%), Positives = 23/109 (21%), Gaps = 30/109 (27%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFINISTA 1316
P I +E V E V + R + S +
Sbjct: 6 SGPAAIIKPLEDQWVAPGEDVELRCELS-RAGTPVHWLKDRKAIRKSQKYDV-------- 56
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ + L I +D GEY C A
Sbjct: 57 ----------------VCEGTMAMLVIRGASLKDAGEYTCEVEASKSTA 89
Score = 43.8 bits (104), Expect = 3e-05
Identities = 11/47 (23%), Positives = 15/47 (31%), Gaps = 2/47 (4%)
Query: 1558 KPKEAPV-FVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
P + E Q V GE ++ P V WL + I
Sbjct: 3 SGSSGPAAIIKPLEDQWVAPGEDVELRCELSRAGTP-VHWLKDRKAI 48
Score = 40.7 bits (96), Expect = 3e-04
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ +PL+DQ V G V L+C ++
Sbjct: 9 AAIIKPLEDQWVAPGEDVELRCELSRAG 36
Score = 35.7 bits (83), Expect = 0.022
Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
I +D G+Y+C + ++AS+ V+ K
Sbjct: 66 VIRGASLKDAGEYTCEV----EASKSTASLHVEEK 96
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2edl_A
2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Length = 108
Score = 90.1 bits (224), Expect = 2e-21
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
F +E A +C L+ VEW + L G R D
Sbjct: 7 GPARFTQDLKTKEASEGATATLQCELSK--VA--PVEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L+I+D+ + D+G Y+C G+ TS LTV+
Sbjct: 63 ELQIHDLSVADAGEYSCMC----GQERTSATLTVRAL 95
Score = 87.0 bits (216), Expect = 2e-20
Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + P FT+ ++ A E A + E ++W + + + +
Sbjct: 1 GSSGSSGPARFTQDLKTKEASEGATATLQCELSKVA--PVEWKKGPETLRDGGRYSLKQD 58
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
T+ L + + + D+G ++ + G+ + SA L V
Sbjct: 59 GTRCELQIHDLSVADAGEYSCMC----GQERTSATLTVRAL 95
Score = 85.5 bits (212), Expect = 7e-20
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 6/104 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
P F + + + G A ++S K V W K + + RY ++ L
Sbjct: 8 PARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETLRDGGRYSLKQDGTRCELQ 65
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAP 1845
I + V D+G Y C+ G+ R A L V++ A + P
Sbjct: 66 IHDLSVADAGEYSCM----CGQERTSATLTVRALPARFTEGSGP 105
Score = 77.8 bits (192), Expect = 4e-17
Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
FT L + EG A + L+ VEW + ++ G R+ D
Sbjct: 8 PARFTQDLKTKE-ASEGATATLQCELSKVAP----VEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPK 813
L+I + D G+YSC G+ TSA++ V+ + E P
Sbjct: 63 ELQIHDLSVADAGEYSCMC----GQERTSATLTVRALPARFTEGSGPS 106
Score = 75.5 bits (186), Expect = 3e-16
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
P +FT +K+ E +G +A +C L+ VEW + + R + D
Sbjct: 8 PARFTQDLKTKE-ASEGATATLQCELSK--VAP--VEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 468 VMDIAYVQSHDSGEYVCRA 486
+ I + D+GEY C
Sbjct: 63 ELQIHDLSVADAGEYSCMC 81
Score = 70.1 bits (172), Expect = 2e-14
Identities = 25/113 (22%), Positives = 33/113 (29%), Gaps = 9/113 (7%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
P FT L+ + E C L + W G R D
Sbjct: 4 GSSGPARFTQDLKT-KEASEGATATLQCELSK--VAPVE--WKKGPETLRDGGRYSLKQD 58
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
L + + D+GEY C G T A + +A TE P S
Sbjct: 59 GTRCELQIHDLSVADAGEYSCMC----GQERTSATLTVRALPARFTEGSGPSS 107
Score = 69.3 bits (170), Expect = 4e-14
Identities = 16/93 (17%), Positives = 23/93 (24%), Gaps = 21/93 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F L E E C + VEW + +
Sbjct: 9 ARFTQDLKTKEASEGATATLQCELSK-------------------VAP--VEWKKGPETL 47
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
R + D + I + D+GEY C
Sbjct: 48 RDGGRYSLKQDGTRCELQIHDLSVADAGEYSCM 80
Score = 64.7 bits (158), Expect = 1e-12
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+EW K L G R D L I+ L D+ Y+C G+ +
Sbjct: 31 ELSKVAPVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMC----GQERT 86
Query: 64 TCTLKIEDRHWLLNKSLRP 82
+ TL + + P
Sbjct: 87 SATLTVRALPARFTEGSGP 105
Score = 64.7 bits (158), Expect = 2e-12
Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 17/115 (14%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
F+ Q L EG A + L V VE+ + + R
Sbjct: 9 ARFT---QDLKTKEASEGATATLQCELSKVA----PVEWKKGPETLRDGGRYSLKQDGTR 61
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEG 420
L+I + D G Y+C + A ++V + P +FT G
Sbjct: 62 CELQIHDLSVADAGEYSCMCGQERTSATLTV--------RALPARFTEGSGPSSG 108
Score = 63.2 bits (154), Expect = 6e-12
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 9/108 (8%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
P RF +KT+ + E + +C+L+ V VEW + L R++ D
Sbjct: 8 PARFTQDLKTK-EASEGATATLQCELSKVAP----VEWKKGPETLRDGGRYSLKQDGTRC 62
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPK 1531
+ + D+GEY C G + T A L P E P
Sbjct: 63 ELQIHDLSVADAGEYSCMC----GQERTSATLTVRALPARFTEGSGPS 106
Score = 57.4 bits (139), Expect = 6e-10
Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 8/89 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ E C L + W G R D L + +
Sbjct: 17 TKEASEGATATLQCELSK--VAPVE--WKKGPETLRDGGRYSLKQDGTRCELQIHDLSVA 72
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTV 601
D+GEY C G T A + + L
Sbjct: 73 DAGEYSCMC----GQERTSATLTVRALPA 97
Score = 52.4 bits (126), Expect = 4e-08
Identities = 18/129 (13%), Positives = 33/129 (25%), Gaps = 31/129 (24%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPR-LR--VECSLSTAFFFPFINISTAFL 1318
P RF ++++ E + + + +
Sbjct: 6 SGPARFTQDLKTKEASEGATATLQCELSKVAPVEWKKGPETLRDGGRYSL---------- 55
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
D L I + D GEY C G+ T AT++ + +P
Sbjct: 56 --------------KQDGTRCELQIHDLSVADAGEYSCMC----GQERTSATLTVRALPA 97
Query: 1379 IQLQNQVPK 1387
+ P
Sbjct: 98 RFTEGSGPS 106
Score = 52.0 bits (125), Expect = 5e-08
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
EW + L G ++ D L I D+G Y+ + SAT
Sbjct: 39 EWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQERTSAT 89
Score = 51.2 bits (123), Expect = 8e-08
Identities = 19/73 (26%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
VEW + L G RY D L I ++G Y C G + T A+L
Sbjct: 38 VEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMC----GQERTSATLTVR 93
Query: 663 SKTNLILESQLPE 675
+ E P
Sbjct: 94 ALPARFTEGSGPS 106
Score = 40.1 bits (94), Expect = 6e-04
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ LK + EG+ TL+C ++
Sbjct: 4 GSSGPARFTQDLKTKEASEGATATLQCELSKVA 36
Score = 38.9 bits (91), Expect = 0.002
Identities = 7/43 (16%), Positives = 13/43 (30%), Gaps = 2/43 (4%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
F + ++ EG A ++ V W T+
Sbjct: 7 GPARFTQDLKTKEASEGATATLQCELS--KVAPVEWKKGPETL 47
Score = 37.4 bits (87), Expect = 0.006
Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPK 868
+I + D G+YSC G+ TSA++ V+ + E P
Sbjct: 65 QIHDLSVADAGEYSCMC----GQERTSATLTVRALPARFTEGSGPS 106
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon,
OKT3 FAB, signaling protein/antibiotic complex; 2.10A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Length = 204
Score = 93.4 bits (231), Expect = 2e-21
Identities = 34/207 (16%), Positives = 62/207 (29%), Gaps = 34/207 (16%)
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ + + WF +GK + + K + G + G+Y CK + +
Sbjct: 26 DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PRGMYQCKGSQNKSKP--- 75
Query: 1004 CKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDN 1063
L V R G + + A + K ++ +E+ + P
Sbjct: 76 --LQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP------------ 121
Query: 1064 LDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 1122
V +G V C P S+ I W N + K + ++
Sbjct: 122 YKVSISGTTVILTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELE 177
Query: 1123 DSGEYICRATNKWGTAMT-----KAKV 1144
SG Y+C +A+V
Sbjct: 178 QSGYYVCYPRGSKPEDANFYLYLRARV 204
Score = 88.0 bits (217), Expect = 1e-19
Identities = 28/194 (14%), Positives = 51/194 (26%), Gaps = 37/194 (19%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
I WFK+G + + + ++ G D +Y CK + + +
Sbjct: 28 EAKNITWFKDGKMIGFLTEDKKKWNLGSNAK-------DPRGMYQCKGSQNKSKPLQV-- 78
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ S + + K+ K + + I+ V
Sbjct: 79 -------YYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTV 131
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
C P ++ W HN K I K + +
Sbjct: 132 ILTCPQ---------------------YPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSL 170
Query: 187 IAYVQSHDSGEYVC 200
+ + SG YVC
Sbjct: 171 KEFSELEQSGYYVC 184
Score = 86.5 bits (213), Expect = 4e-19
Identities = 32/213 (15%), Positives = 52/213 (24%), Gaps = 48/213 (22%)
Query: 414 HIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAY 473
H+ + ++ S C + + WF +GK I K + G D
Sbjct: 8 HLVKVYDYQEDGSVLLTC-----DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD--- 59
Query: 474 VQSHDSGEYVCRAWNNF--------------------IFIPPFPIFIF------HQIRLP 507
G Y C+ N +
Sbjct: 60 ----PRGMYQCKGSQNKSKPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMG 115
Query: 508 SPSQDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDM 566
+Q V +G V C P S+ I W N + K +
Sbjct: 116 GITQTPYKVSISGTTVILTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHLSLK 171
Query: 567 DYVYARDSGEYICRATNKWGTAMT-----KAKV 594
++ SG Y+C +A+V
Sbjct: 172 EFSELEQSGYYVCYPRGSKPEDANFYLYLRARV 204
Score = 84.6 bits (208), Expect = 3e-18
Identities = 25/201 (12%), Positives = 50/201 (24%), Gaps = 27/201 (13%)
Query: 594 VICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
+ C + WF +GK + + + G D G+Y+C+ +
Sbjct: 23 LTCDAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PRGMYQCKGSQNKSKP 75
Query: 654 VTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPL 713
+ + + S + + +DA ++ + V +
Sbjct: 76 L---------QVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSI 126
Query: 714 SNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVY 773
S G P + + W N K + + +
Sbjct: 127 S-------GTTVILTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSE 175
Query: 774 PEDCGQYSCRAYNDYGEAVTS 794
E G Y C E
Sbjct: 176 LEQSGYYVCYPRGSKPEDANF 196
Score = 79.6 bits (195), Expect = 1e-16
Identities = 24/188 (12%), Positives = 49/188 (26%), Gaps = 37/188 (19%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGY 883
+ + G Y C+ + + +
Sbjct: 53 LGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSA--------------------------- 85
Query: 884 GHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPT 943
+D D + + + + + + TP ++++ +T+ C
Sbjct: 86 ----DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTV-ILTCPQ--- 137
Query: 944 NDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
P + W HN K + K I + L SG Y C E +
Sbjct: 138 -YPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPED-AN 195
Query: 1004 CKLTVKGR 1011
L ++ R
Sbjct: 196 FYLYLRAR 203
Score = 78.8 bits (193), Expect = 2e-16
Identities = 24/176 (13%), Positives = 43/176 (24%), Gaps = 22/176 (12%)
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA-KC 1723
I WF++ I K + + G++ K +
Sbjct: 26 DAEAKNITWFKDGKMIGFLT-------EDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQV 78
Query: 1724 SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLAR-----FDAKISATK-------- 1770
+ + + ++ + IS T
Sbjct: 79 YYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQY 138
Query: 1771 -PLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEAR 1825
++ W N K I D K + D L + +E SG Y C + E
Sbjct: 139 PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 194
Score = 77.6 bits (190), Expect = 5e-16
Identities = 24/170 (14%), Positives = 42/170 (24%), Gaps = 24/170 (14%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQA--- 392
+ + + +GK I + G + G+Y C+ + +
Sbjct: 26 DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PRGMYQCKGSQNKSKPLQV 78
Query: 393 -----EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECT---------LTPVND 438
+ K S + G LT
Sbjct: 79 YYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQY 138
Query: 439 PELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
P ++ W HN K I K + + + + SG YVC
Sbjct: 139 PGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRG 188
Score = 69.2 bits (168), Expect = 4e-13
Identities = 21/172 (12%), Positives = 44/172 (25%), Gaps = 22/172 (12%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATT----- 291
WF + K + + K + G A D G+Y K + +K
Sbjct: 30 KNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PRGMYQCKGSQNKSKPLQVYYRM 82
Query: 292 -SGTLKCLERLFVN---------HNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMT 341
S + + + I+ L
Sbjct: 83 GSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSE 142
Query: 342 VEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+ + +N K I + + + + +++E +G Y C +
Sbjct: 143 ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 194
Score = 66.1 bits (160), Expect = 5e-12
Identities = 21/171 (12%), Positives = 40/171 (23%), Gaps = 26/171 (15%)
Query: 1341 LDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEA 1400
++ + +G Y C+ + + QV M + + A
Sbjct: 51 WNLGSNAKDPRGMYQCKGSQNKSKPL-----------------QVYYRMGSADDAKKDAA 93
Query: 1401 AIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVE 1460
+ + E + ++ V C P ++
Sbjct: 94 KKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVI-----LTCPQ----YPGSEIL 144
Query: 1461 WFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDET 1511
W N K + I + E SG Y+C D
Sbjct: 145 WQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 195
Score = 62.6 bits (151), Expect = 8e-11
Identities = 26/180 (14%), Positives = 39/180 (21%), Gaps = 49/180 (27%)
Query: 153 NDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKP---- 208
+ + WF +GK I K + G D G Y C+ +
Sbjct: 26 DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PRGMYQCK--GSQNKSKPL 76
Query: 209 ---LPAGAKFKTTHDFGYVAL-------------DIELMLKTLVPFT------------- 239
G+ D + E+ T P+
Sbjct: 77 QVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCP 136
Query: 240 -------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
W N+K + K + E SG Y SK
Sbjct: 137 QYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANF 196
Score = 60.7 bits (146), Expect = 4e-10
Identities = 8/64 (12%), Positives = 15/64 (23%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ P +I W N + ++ + S Y C E
Sbjct: 133 LTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE 192
Query: 61 AVST 64
+
Sbjct: 193 DANF 196
Score = 59.1 bits (142), Expect = 1e-09
Identities = 28/198 (14%), Positives = 53/198 (26%), Gaps = 37/198 (18%)
Query: 1435 DQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPED 1494
E S C + WF +GK + ++ G +
Sbjct: 13 YDYQEDGSVLLTC-----DAEAKNITWFKDGKMIGFLTEDKKKWNLGS-------NAKDP 60
Query: 1495 SGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLV 1554
G Y C+ + L+ + G +++ K K + + E++
Sbjct: 61 RGMYQCKGSQNKS-----KPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMG 115
Query: 1555 EDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITA- 1613
++Q + G YP ++W N I + K
Sbjct: 116 G----------ITQTPYKVSISGTTVILTCPQ--YPGSEILWQHNDKNIGGDEDDKNIGS 163
Query: 1614 -------TETTEMEHKGK 1624
E +E+E G
Sbjct: 164 DEDHLSLKEFSELEQSGY 181
Score = 53.7 bits (128), Expect = 8e-08
Identities = 18/169 (10%), Positives = 36/169 (21%), Gaps = 34/169 (20%)
Query: 1588 GYPRPRVMWLINGHTIVNEIVRKIT---------------------ATETTEMEHKGKIQ 1626
+ W +G I K ++ ++ ++
Sbjct: 26 DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSA 85
Query: 1627 ERVVDASEKPAKPPVFTKKIQP----CRAFEQDQARFEVEFDG---------DPLPTIKW 1673
+ + K K Q ++V G P I W
Sbjct: 86 DDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILW 145
Query: 1674 FREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 1722
D I D + + + +E SG + +
Sbjct: 146 QHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 194
Score = 51.4 bits (122), Expect = 5e-07
Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 18/130 (13%)
Query: 1065 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDS 1124
D E G V C I WF +G+ + K ++ G + D
Sbjct: 14 DYQEDGSVLLTC-----DAEAKNITWFKDGKMIGFLTEDKKKWNLGSNAKD-------PR 61
Query: 1125 GEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEI 1184
G Y C+ + + + A + D+ + K+ + + E+
Sbjct: 62 GMYQCKGSQNKSKPLQVYYRMGSA------DDAKKDAAKKDDAKKDDAKKDGSDGNEEMG 115
Query: 1185 PEEPPRLNQS 1194
S
Sbjct: 116 GITQTPYKVS 125
Score = 49.5 bits (117), Expect = 2e-06
Identities = 19/122 (15%), Positives = 33/122 (27%), Gaps = 15/122 (12%)
Query: 1769 TKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC-- 1826
+ ++ W K+GK I K + + G Y+C N +
Sbjct: 27 AEAKNITWFKDGKMIGFLTEDKK-------KWNLGSNAKDPRGMYQCKGSQNKSKPLQVY 79
Query: 1827 ------EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ +KK K+ A +E + G+ V L C
Sbjct: 80 YRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPYKVSISGTTVILTCPQYP 139
Query: 1881 KP 1882
Sbjct: 140 GS 141
Score = 47.2 bits (111), Expect = 1e-05
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 12/94 (12%)
Query: 712 PLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISP 771
L + D +E + D + WF +GK + + + +
Sbjct: 8 HLVKVYDYQEDGSVLLT-----CDAEAKNITWFKDGKMIGFLTEDKK-------KWNLGS 55
Query: 772 VYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
+ G Y C+ + + + +
Sbjct: 56 NAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAK 89
Score = 33.7 bits (76), Expect = 0.32
Identities = 6/31 (19%), Positives = 8/31 (25%)
Query: 1337 GFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
++ E G YVC E
Sbjct: 165 EDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 195
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2,
structural genomics, NPPSFA; NMR {Mus musculus}
Length = 106
Score = 89.8 bits (223), Expect = 2e-21
Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
E L DLT+ + A F+C ++ D +T +W+ NG + RI + F
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVS---DEKVTGKWYKNGVEVRPSKRITISHVGRFHK 64
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
L I+DV D G YT S KL
Sbjct: 65 LVIDDVRPEDEGDYTFVPDGYALSL--SAKLNFL 96
Score = 84.0 bits (208), Expect = 3e-19
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 9/113 (7%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 1691
S + + I +QA F+ E + T KW++ + S I
Sbjct: 1 GSSGSSGQLEVLQDIADLTVKAAEQAVFKCEVSDEK-VTGKWYKNGVEVRPSKRITISHV 59
Query: 1692 STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 1744
L++ V ED G + + + SA L E + V PS
Sbjct: 60 GRFHKLVIDDVRPEDEGDYTFVPDG--YALSLSAKLNFLEIK------VSGPS 104
Score = 83.2 bits (206), Expect = 4e-19
Identities = 25/105 (23%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
L I+ + + A F ++S K W KNG ++ P R L+
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEKV-TGKWYKNGVEVRPSKRITISHVGRFHKLV 66
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPG 1846
I + ED G Y V A A+L K P+ G
Sbjct: 67 IDDVRPEDEGDYTFVPDGYALS--LSAKLNFLEIK---VSGPSSG 106
Score = 75.9 bits (187), Expect = 2e-16
Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
+ I L +K + A F+C V+D ++ +W+ NG + R+ + F
Sbjct: 8 QLEVLQDIADLT-VKAAEQAVFKCE---VSDEKVTGKWYKNGVEVRPSKRITISHVGRFH 63
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
+ I V+ D G+Y
Sbjct: 64 KLVIDDVRPEDEGDYTFVPDG 84
Score = 72.4 bits (178), Expect = 3e-15
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
++++ ++ E A F+ ++ D K+ +W+ NG ++ R F
Sbjct: 8 QLEVLQDIADLT-VKAAEQAVFKCEVS---DEKVTGKWYKNGVEVRPSKRITISHVGRFH 63
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L I V PED G Y+ SA +
Sbjct: 64 KLVIDDVRPEDEGDYTFVPDGYALSL--SAKLNFL 96
Score = 72.4 bits (178), Expect = 3e-15
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 4/93 (4%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
+ D L V A + F C + SD + W+ NG R+ + F
Sbjct: 8 QLEVLQDIAD-LTVKAAEQAVFKCEV---SDEKVTGKWYKNGVEVRPSKRITISHVGRFH 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L +D V D G+Y + K +
Sbjct: 64 KLVIDDVRPEDEGDYTFVPDGYALSLSAKLNFL 96
Score = 67.4 bits (165), Expect = 2e-13
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + D+ K E F C V +D ++ +W+ NG +
Sbjct: 9 LEVLQDIADLTVKAAEQAVFKCEV--------------------SDEKVTGKWYKNGVEV 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
R+ + F + I V+ D G+Y
Sbjct: 49 RPSKRITISHVGRFHKLVIDDVRPEDEGDYTFV 81
Score = 65.9 bits (161), Expect = 6e-13
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 21/121 (17%)
Query: 287 GSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEF 344
GS+ +SG L+ + Q +++L+ E A F+ V D+ +T ++
Sbjct: 1 GSSGSSGQLE-----VL-----------QDIADLTVKAAEQAVFKCE---VSDEKVTGKW 41
Query: 345 LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKS 404
NG + S RI H L I + ED G YT +N + S
Sbjct: 42 YKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSAKLNFLEIKVS 101
Query: 405 K 405
Sbjct: 102 G 102
Score = 64.7 bits (158), Expect = 1e-12
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+L V A + F C + SD + W+ NG R+ + F L +D V
Sbjct: 17 DLTVKAAEQAVFKCEV---SDEKVTGKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPE 73
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D G+Y + K +
Sbjct: 74 DEGDYTFVPDGYALSLSAKLNFL 96
Score = 61.6 bits (150), Expect = 2e-11
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+D + +W+KNGV + RI + L I+ +R +D YT +
Sbjct: 33 SDEKVTGKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSL--S 90
Query: 65 CTLKIED 71
L +
Sbjct: 91 AKLNFLE 97
Score = 61.6 bits (150), Expect = 2e-11
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 6/93 (6%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
+ I + + F+C+ V D + +W+ NG + R + +
Sbjct: 8 QLEVLQDIADL-TVKAAEQAVFKCE---VSDEKVTGKWYKNGVEVRPSKRITISHVGRFH 63
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ V PED G+Y A L
Sbjct: 64 KLVIDDVRPEDEGDYTFVPDG--YALSLSAKLN 94
Score = 52.4 bits (126), Expect = 3e-08
Identities = 11/51 (21%), Positives = 18/51 (35%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
+W+ N + + +H + L I ED G YT S +
Sbjct: 40 KWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALSLS 90
Score = 49.3 bits (118), Expect = 3e-07
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 6/68 (8%)
Query: 596 CKV--LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
C+V V +W+ NG ++ R H L I E+ G Y S
Sbjct: 30 CEVSDEKVTGKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGYALS- 88
Query: 654 VTKASLKC 661
S K
Sbjct: 89 ---LSAKL 93
Score = 44.7 bits (106), Expect = 1e-05
Identities = 20/131 (15%), Positives = 31/131 (23%), Gaps = 48/131 (36%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAFF 1307
+ +I +TV+ AE F+ V + R+ +
Sbjct: 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVTGKWYKNGVEVRPSKRITISH------- 58
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
F L ID V PED+G+Y
Sbjct: 59 ---------------------------VGRFHKLVIDDVRPEDEGDYTFVPDGYALSLSA 91
Query: 1368 KATISCKKIPT 1378
K K+
Sbjct: 92 KLNFLEIKVSG 102
Score = 42.8 bits (101), Expect = 7e-05
Identities = 10/69 (14%), Positives = 20/69 (28%), Gaps = 9/69 (13%)
Query: 1558 KPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT 1617
+ V+ E A F V+ + W NG ++ ++
Sbjct: 4 GSSGQLEVLQDIADLTVKAAEQAVFKCEVSD-EKVTGKWYKNG--------VEVRPSKRI 54
Query: 1618 EMEHKGKIQ 1626
+ H G+
Sbjct: 55 TISHVGRFH 63
Score = 38.9 bits (91), Expect = 0.002
Identities = 6/29 (20%), Positives = 11/29 (37%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
V + + D VK KC ++ +
Sbjct: 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEK 36
Score = 33.9 bits (78), Expect = 0.11
Identities = 9/32 (28%), Positives = 11/32 (34%), Gaps = 2/32 (6%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I V PED G Y+ SA +
Sbjct: 67 IDDVRPEDEGDYTFVPDGYALSL--SAKLNFL 96
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor
tyrosine kinase, class III, recep ligand complex,
cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A
{Mus musculus}
Length = 290
Score = 95.6 bits (237), Expect = 2e-21
Identities = 47/289 (16%), Positives = 69/289 (23%), Gaps = 28/289 (9%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKIT-ATETTEME 1620
P V+ G+ C V W + +K E E
Sbjct: 13 PSIHPAQSELIVEAGDTLSLTCI-----DPDFVRWTFKTYFNEMVENKKNEWIQEKAEAT 67
Query: 1621 HKGKIQERVVDASEKPA-----KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR 1675
G + P P E A +
Sbjct: 68 RTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIE 127
Query: 1676 EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQ 1734
D + D I I A+ G L V E +
Sbjct: 128 CD-GKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIK 186
Query: 1735 GGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKNGKKI--IPDIRYKT 1791
P +S ++ G I ++ WLK + I +++ +
Sbjct: 187 A------IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNS 240
Query: 1792 LEEDNLF-----TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+ TL I A V+DSG + C A N G A L V K
Sbjct: 241 WHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 92.5 bits (229), Expect = 3e-20
Identities = 39/268 (14%), Positives = 80/268 (29%), Gaps = 34/268 (12%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
V + + E + + TG YTC +N + I V +
Sbjct: 39 FVRWTFKTYFNEMVENKKNE-------WIQEKAEATRTGTYTCSNSNGLT-SSIYVFVR- 89
Query: 401 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHKNRVK 459
P K L K+ A C LT + + +GK +
Sbjct: 90 ------DPAKLFLVGLPLF-GKEDSDALVRCPLT--DPQVSQYSLIECDGKSLPTDLTFV 140
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFI--PPFPIFIFHQIRLP---SPSQDNL 514
G + ++ +++ C A + ++ F + + I+ S + +
Sbjct: 141 PNPKAGITIKNV--KRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSH 198
Query: 515 DVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI-------SLDMD 567
+ + C ++ ++ W ++VK +L +
Sbjct: 199 LLKKGDTFTVVCTIK-DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTIS 257
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI 595
DSG ++C A N +G+A +
Sbjct: 258 SARVDDSGVFMCYANNTFGSANVTTTLK 285
Score = 92.5 bits (229), Expect = 3e-20
Identities = 46/328 (14%), Positives = 85/328 (25%), Gaps = 87/328 (26%)
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
P+Q L V + C + W F K +
Sbjct: 16 HPAQSELIVEAGDTLSLTCIDPDF------VRWTFKTYFNEMVENKKN-------EWIQE 62
Query: 568 YVYARDSGEYICRATNKWGTAM----------------------TKAKVICKV----LTV 601
A +G Y C +N +++ + A V C + ++
Sbjct: 63 KAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQ 122
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+GK LP + GI I ++ + C A +
Sbjct: 123 YSLIECDGKSLPTDLTFVPNPKAGITIKNVKR--AYHRLCVRCAAQRDGTWLHSDKFTLK 180
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
V + + PV +VP ++ L++
Sbjct: 181 VREA-------------------------------------IKAIPVVSVPETSH-LLKK 202
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV-------ILEISPVYP 774
G+ + + W + ++ + L IS
Sbjct: 203 GDTFTVVCTIK-DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARV 261
Query: 775 EDCGQYSCRAYNDYGEAVTSASMKVQGK 802
+D G + C A N +G A + ++KV K
Sbjct: 262 DDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 83.2 bits (205), Expect = 4e-17
Identities = 40/328 (12%), Positives = 82/328 (25%), Gaps = 70/328 (21%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
P S + + G+ V W + + +
Sbjct: 11 SPPSIHPAQSELI-VEAGDTLSLTCIDPDF------VRWTFKTYFNEMVENKKN------ 57
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGMEVFISF 821
G Y+C N +S + V+ + L + + +
Sbjct: 58 -EWIQEKAEATRTGTYTCSNSNGLT---SSIYVFVRDPAKLFLVGLPLFGKEDSDALVR- 112
Query: 822 HEISPVYPEDCGQYSCRA----------YNDYGEAV-TSASMKVQGKRSIILESQLPKGM 870
C G+++ T + K I +++
Sbjct: 113 ---------------CPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYH 157
Query: 871 EGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAE 930
+ A+ +G + T+ ++ E + P T L +
Sbjct: 158 RLCVRCAAQRDGTWLHSDKFTL---------------KVREAIKAIPVVSVPETSHLLKK 202
Query: 931 STLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV-------ILEINDVYL 983
C + S+ W +++K + L I+ +
Sbjct: 203 GDTFTVVCTIK-DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARV 261
Query: 984 RDSGLYTCKATNKHGEATTSCKLTVKGR 1011
DSG++ C A N G A + L V +
Sbjct: 262 DDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 80.5 bits (198), Expect = 3e-16
Identities = 39/302 (12%), Positives = 65/302 (21%), Gaps = 75/302 (24%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
PP L ++ GD+ C V W K
Sbjct: 11 SPPSIHPAQSELI-VEAGDTLSLTCIDPD------FVRWTFKTYFNEMVENKKNE----- 58
Query: 467 VVMDIAYVQSHDSGEYVCRAWNN-----FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGK 521
++ +G Y C N ++F+ L +
Sbjct: 59 --WIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKLF-----LVGLPL----FGKEDS 107
Query: 522 -VHFDCRLEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYIC 579
C + +G+ T G + A C
Sbjct: 108 DALVRCP--LTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKN--VKRAYHRLCVRC 163
Query: 580 RATNKWGTAMTK------------------------------AKVICKV----LTVIVEW 605
A + V+C + +V W
Sbjct: 164 AAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMW 223
Query: 606 FYNGKKLPHGHRYRTFHDFGIV-------ILDILYCYEENSGVYECRATNKYGSDVTKAS 658
+ H + + L I ++SGV+ C A N +GS +
Sbjct: 224 LKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTT 283
Query: 659 LK 660
LK
Sbjct: 284 LK 285
Score = 78.2 bits (192), Expect = 2e-15
Identities = 36/237 (15%), Positives = 60/237 (25%), Gaps = 51/237 (21%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGSRIKTINDFGFVI 975
+ L E + A C T+ +GK+L G I
Sbjct: 92 AKLFLVGLPLFGKEDSDALVRCP--LTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITI 149
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
N C A G S K T+K R+ I
Sbjct: 150 --KNVKRAYHRLCVRCAAQR-DGTWLHSDKFTLKVREAI--------------------- 185
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
PV + +L + + C ++ ++ W
Sbjct: 186 ---------------KAIPVVSVPETSHL-LKKGDTFTVVCTIK-DVSTSVNSMWLKMNP 228
Query: 1096 PFATGSRVKTVYDFGFI-------SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
++VK +L + DSG ++C A N +G+A +
Sbjct: 229 QPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLK 285
Score = 72.1 bits (176), Expect = 2e-13
Identities = 29/249 (11%), Positives = 58/249 (23%), Gaps = 45/249 (18%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
PP D ++W + + + K+
Sbjct: 10 PSPPSIHPAQSELIVEAGDTLSLTCIDPD----FVRWTFKTYFNEMVEN-------KKNE 58
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 1756
I + +G + N S + V + P
Sbjct: 59 WIQEKAEATRTGTYTCSNSNGLTS---SIYVFVRD----------PAKLFLVGLPLFGKE 105
Query: 1757 GQLARFDAKISATKPLDVYWLK-NGKKIIPDIRYKTLEEDNLFTLLIIEAV-VEDSGAYE 1814
A ++ + ++ +GK + D+ + + + I
Sbjct: 106 DSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVP---NPKAGITIKNVKRAYHRLCVR 162
Query: 1815 CVAMNNAGE-ARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVT 1873
C A + + L V+ A P V+ P +K+G T
Sbjct: 163 CAAQRDGTWLHSDKFTLKVR---------------EAIKAIPVVSVPETSHLLKKGDTFT 207
Query: 1874 LKCRITGKP 1882
+ C I
Sbjct: 208 VVCTIKDVS 216
Score = 69.0 bits (168), Expect = 2e-12
Identities = 41/318 (12%), Positives = 84/318 (26%), Gaps = 64/318 (20%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P +++ + + + C V W
Sbjct: 13 PSIHPAQSELIVEAGDTLSLTCIDPDF-----------------------VRWTFKTYFN 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ----------WFVNNKPLPAGAKFKTT 218
K ++ +G Y C FV + F
Sbjct: 50 EMVENKKNE-------WIQEKAEATRTGTYTCSNSNGLTSSIYVFVRDPAKL----FLVG 98
Query: 219 HDFGYVALDIELMLKTLV-----PFTEWF-VNNKPLPAGAKFKTTHDFGYVALDIVGAYA 272
+ D + +++ + + K LP F G ++ A
Sbjct: 99 LPL-FGKEDSDALVRCPLTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKNVK--RA 155
Query: 273 EDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASL 332
A G+ S L+ P+ S+ L +G+ +
Sbjct: 156 YHRLCVRCAAQR-DGTWLHSDKFT-LKVREAIKAIPVVSVPETSHL-LKKGDTFTVVCT- 211
Query: 333 IPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMV-------VLEILGTKIEDTGVYTCRA 385
I ++ +L + +++ L I +++D+GV+ C A
Sbjct: 212 IKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYA 271
Query: 386 TNKWGQAEISVNLECVDK 403
N +G A ++ L+ V+K
Sbjct: 272 NNTFGSANVTTTLKVVEK 289
Score = 66.7 bits (162), Expect = 1e-11
Identities = 42/342 (12%), Positives = 71/342 (20%), Gaps = 87/342 (25%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
P + PP +++ + + C V W +
Sbjct: 7 PGEPSPPSI-HPAQSELIVEAGDTLSLTCIDPD------FVRWTFKTYFNEMVENKKNEW 59
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEK 1538
+G Y C +N SI
Sbjct: 60 IQEKA-------EATRTGTYTCSNSNGLT--------------------------SSIYV 86
Query: 1539 IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMW-- 1596
V D +E A +T +
Sbjct: 87 F--------------VRD-----PAKLFLVGLPLFGKEDSDALVRCPLTDPQVSQYSLIE 127
Query: 1597 -----LINGHTIVNEIVRKITATETTEMEHKG------KIQERVVDAS-------EKPAK 1638
L T V IT H+ + + + E
Sbjct: 128 CDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKA 187
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFST---- 1693
PV + + D W + + + +++
Sbjct: 188 IPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFN 247
Query: 1694 ---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+ L + ++DSGVF A N G A + L V EK
Sbjct: 248 YERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVEK 289
Score = 65.5 bits (159), Expect = 3e-11
Identities = 35/320 (10%), Positives = 72/320 (22%), Gaps = 94/320 (29%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTL 67
+ W + ++ A + YTC +N L ++
Sbjct: 37 PDFVRWTFKTYFNEMVENKKNE-------WIQEKAEATRTGTYTCSNSNGLTSSIYV--- 86
Query: 68 KIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVH 127
V D + KE+ +
Sbjct: 87 ------------------------------------FVRDPAKLFLVGLPLFGKEDSDAL 110
Query: 128 FDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH-NGKPIFHKNRVKMVSDFGFVVMD 186
C + + + +GK + G + +
Sbjct: 111 VRCPLT-------------------DPQVSQYSLIECDGKSLPTDLTFVPNPKAGITIKN 151
Query: 187 IAYVQSHDSGEYVCQWFVNNK------------PLPAGAKFKTTHDFGYVAL---DIELM 231
+ +++ C + + + ++ ++
Sbjct: 152 V--KRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVV 209
Query: 232 LKTL---VPFT-EWFVNNKPLPAGAKFKTTHDF-------GYVALDIVGAYAEDSGIYTV 280
W N A+ K L I A +DSG++
Sbjct: 210 CTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMC 269
Query: 281 KATNSKGSATTSGTLKCLER 300
A N+ GSA + TLK +E+
Sbjct: 270 YANNTFGSANVTTTLKVVEK 289
Score = 56.7 bits (136), Expect = 2e-08
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKATNL 57
++ W K ++++ TL+I+S R DDS ++ C A N
Sbjct: 215 VSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNT 274
Query: 58 LGEAVSTCTLKIEDR 72
G A T TLK+ ++
Sbjct: 275 FGSANVTTTLKVVEK 289
Score = 56.3 bits (135), Expect = 3e-08
Identities = 39/307 (12%), Positives = 64/307 (20%), Gaps = 109/307 (35%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
V W + + +G Y C +N S +
Sbjct: 40 VRWTFKTYFNEMVENKKN-------EWIQEKAEATRTGTYTCSNSNGLTSSIY------- 85
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ R + + +E
Sbjct: 86 --------------------------------------VFVRDPAKLFLVGLPLF-GKED 106
Query: 723 ENAHFEARLTPTDDPKLKVEWF-WNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYS 781
+A TD + +GK + T F G I +
Sbjct: 107 SDALVRCP--LTDPQVSQYSLIECDGKSLPTDLTFVPNPKAGITI--KNVKRAYHRLCVR 162
Query: 782 CRAYNDYGEAVTSA-SMKVQGKRSII-------LESQLPKGMEVFI-------------- 819
C A D + ++KV+ I L KG +
Sbjct: 163 CAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSM 222
Query: 820 -----------------------------SFHEISPVYPEDCGQYSCRAYNDYGEAVTSA 850
IS +D G + C A N +G A +
Sbjct: 223 WLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTT 282
Query: 851 SMKVQGK 857
++KV K
Sbjct: 283 TLKVVEK 289
Score = 54.4 bits (130), Expect = 1e-07
Identities = 20/146 (13%), Positives = 36/146 (24%), Gaps = 33/146 (22%)
Query: 1737 RGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDN 1796
G PPS S ++ G V W + + E+
Sbjct: 7 PGEPSPPSIHPAQSELIVEAGDTLSLTCIDPDF----VRWTF-------KTYFNEMVENK 55
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
+ +A +G Y C N + + V+ +
Sbjct: 56 KNEWIQEKAEATRTGTYTCSNSNGLTSS---IYVFVR-------------------DPAK 93
Query: 1857 VAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ KE S ++C +T
Sbjct: 94 LFLVGLPLFGKEDSDALVRCPLTDPQ 119
Score = 52.8 bits (126), Expect = 4e-07
Identities = 30/287 (10%), Positives = 51/287 (17%), Gaps = 99/287 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+ G Y C N
Sbjct: 58 EWIQEKAEATRTGTYTCSNSNGLT------------------------------------ 81
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMK 1458
S IY+ D P + + + C L +
Sbjct: 82 -------SSIYVFVRD--------PAKLF--LVGLPLFGKEDSDALVRCPLT--DPQVSQ 122
Query: 1459 VEWF-LNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKT 1517
+GK LP F + + C A +
Sbjct: 123 YSLIECDGKSLPTDLTF--VPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKF--- 177
Query: 1518 TGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEG 1577
L E K PV + +++G
Sbjct: 178 ----------------------------------TLKVREAIKAIPVVSVPETSHLLKKG 203
Query: 1578 EPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATETTEMEHK 1622
+ CT + MWL + K + + ++
Sbjct: 204 DTFTVVCT-IKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYE 249
Score = 52.4 bits (125), Expect = 5e-07
Identities = 22/227 (9%), Positives = 39/227 (17%), Gaps = 64/227 (28%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
P ++L + C V W K
Sbjct: 13 PSIHPAQSELIVEAGDTLSLTCIDPDF------VRWTFKTYFNEMVENKKNE-------W 59
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
+G YTC +N + + V+ + +
Sbjct: 60 IQEKAEATRTGTYTCSNSNGLTSSIY---VFVRDPAKLFLVG------------------ 98
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGR 1095
P+F + D C + +G+
Sbjct: 99 ----------------LPLFGKEDSD---------ALVRCP--LTDPQVSQYSLIECDGK 131
Query: 1096 PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKA 1142
T G + A C A +
Sbjct: 132 SLPTDLTFVPNPKAGITIK--NVKRAYHRLCVRCAAQRDGTWLHSDK 176
Score = 51.3 bits (122), Expect = 1e-06
Identities = 40/324 (12%), Positives = 84/324 (25%), Gaps = 52/324 (16%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
P+PP Q L V + C + W F K
Sbjct: 10 PSPPSIHPA-QSELIVEAGDTLSLTCIDPDF------VRWTFKTYFNEMVENKKN----- 57
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKEL 1170
+ A +G Y C +N +++ + V + KL +
Sbjct: 58 --EWIQEKAEATRTGTYTCSNSNGLTSSI----------YVFVRDP--------AKLFLV 97
Query: 1171 EKNYTPEEIEEDEIP---EEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEKHD 1227
+E + + +P S + + L N + +
Sbjct: 98 GLPLFGKEDSDALVRCPLTDPQVSQYSLIECDGK------SLPTDLTFVPNPKAGITIKN 151
Query: 1228 IVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETR 1287
+ A + + ++ E + P S +++ +
Sbjct: 152 VKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCT 211
Query: 1288 VEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVY 1347
++ V + + + + H F++ + +L I
Sbjct: 212 IK-DVSTSVNSM------WLKMNPQPQHIAQVKHNSWHRGDFNYERQE----TLTISSAR 260
Query: 1348 PEDQGEYVCRAYNDHGEAFTKATI 1371
+D G ++C A N G A T+
Sbjct: 261 VDDSGVFMCYANNTFGSANVTTTL 284
Score = 49.3 bits (117), Expect = 5e-06
Identities = 24/203 (11%), Positives = 45/203 (22%), Gaps = 59/203 (29%)
Query: 7 PNLKIEWFK-NGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ + +G L G+ N RA C A S
Sbjct: 119 QVSQYSLIECDGKSLPTDLTFVPNPKAGI--TIKNVKRAYHRLCVRCAAQRDGTWLHS-- 174
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
+ L A+P++ E ++ + +
Sbjct: 175 ------DKFTLKVREAIKAIPVVSVPETSHLLK-----------------------KGDT 205
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV-- 183
C ++ + W H +VK S
Sbjct: 206 FTVVCTIK------------------DVSTSVNSMWLKMNPQPQHIAQVKHNSWHRGDFN 247
Query: 184 -----VMDIAYVQSHDSGEYVCQ 201
+ I+ + DSG ++C
Sbjct: 248 YERQETLTISSARVDDSGVFMCY 270
Score = 47.0 bits (111), Expect = 3e-05
Identities = 21/181 (11%), Positives = 37/181 (20%), Gaps = 52/181 (28%)
Query: 1343 IDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAI 1402
+ + C A D
Sbjct: 150 KNVKRAYHRLCVRCAAQRDGTW-------------------------------------- 171
Query: 1403 KKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWF 1462
++ + L K P V+ +T L + + C ++ W
Sbjct: 172 -LHSDKFTLK----VREAIKAIP-VVSVPETSHLLKKGDTFTVVCT-IKDVSTSVNSMWL 224
Query: 1463 LNGKPLPHKNRFNPIYDFGYVAMNFGW-------VYPEDSGEYLCRATNLYGMDETRAIL 1515
H + +DSG ++C A N +G L
Sbjct: 225 KMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTL 284
Query: 1516 K 1516
K
Sbjct: 285 K 285
Score = 32.0 bits (72), Expect = 1.5
Identities = 7/37 (18%), Positives = 15/37 (40%)
Query: 1845 PGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGK 1881
P A+ + P++ + V+ G ++L C
Sbjct: 3 PSASPGEPSPPSIHPAQSELIVEAGDTLSLTCIDPDF 39
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 100
Score = 89.4 bits (222), Expect = 3e-21
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P L P + TLA A +C+ T DP + W G TI + G
Sbjct: 8 PPIILQGPANQTLAVDGTALLKCK--ATGDPLPVISWLKEGFTFPGRDPRATIQEQGT-- 63
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
L+I ++ + D+G YTC AT+ GE + S L V
Sbjct: 64 LQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 84.0 bits (208), Expect = 2e-19
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
PP L ++ + V A K + + WLK G T++E TL
Sbjct: 8 PPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQEQG--TLQ 65
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
I + D+G Y CVA +++GE A L V
Sbjct: 66 IKNLRISDTGTYTCVATSSSGETSWSAVLDVT 97
Score = 75.1 bits (185), Expect = 3e-16
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI-TSSPDFQIHT 1690
S + PP+ + A + + GDPLP I W +E F P I
Sbjct: 1 GSSGSSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE 60
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
T L ++ + + D+G + +A + G+ SA L V E
Sbjct: 61 QGT---LQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 67.4 bits (165), Expect = 1e-13
Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 12/104 (11%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
PP+ N + G C+ DP I W G F T+ + G
Sbjct: 8 PPIILQGPA-NQTLAVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPRATIQEQG-- 62
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTES 1156
+L + + D+G Y C AT+ G A + VTES
Sbjct: 63 TLQIKNLRISDTGTYTCVATSSSGETSWSAVL-------DVTES 99
Score = 65.1 bits (159), Expect = 9e-13
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
DP I W K G + + G TL I +LR D+ YTC AT+ GE +
Sbjct: 35 DPLPVISWLKEGFTFPGRDPRATIQEQG--TLQIKNLRISDTGTYTCVATSSSGETSWSA 92
Query: 66 TLKIED 71
L + +
Sbjct: 93 VLDVTE 98
Score = 62.8 bits (153), Expect = 7e-12
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 5/96 (5%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P+ +N L A + + T DP + W G T + G
Sbjct: 8 PPIILQGPANQT-LAVDGTALLKCK--ATGDPLPVISWLKEGFTFPGRDPRATIQEQGT- 63
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L+I + D G Y+C A + GE SA + V
Sbjct: 64 -LQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 60.5 bits (147), Expect = 3e-11
Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 17/109 (15%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
PI + P+ N + G C+ DP I W G F
Sbjct: 6 SGPPIILQG------PA--NQTLAVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPR 55
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI 602
T+ + G +L + + D+G Y C AT+ G A L V
Sbjct: 56 ATIQEQG--TLQIKNLRISDTGTYTCVATSSSGETSWSAV-----LDVT 97
Score = 59.7 bits (145), Expect = 6e-11
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PP + +Q + + + +C+ GDP + W G P ++ I + G
Sbjct: 8 PPIIL--QGPANQTLAVDGTALLKCK--ATGDPLPVISWLKEGFTFPGRDPRATIQEQG- 62
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ + D+G Y C AT+ G A+L
Sbjct: 63 -TLQIKNLRISDTGTYTCVATSSSGETSWSAVL 94
Score = 56.2 bits (136), Expect = 1e-09
Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P+ + + L+ A + A+ GD + +L G T+ G
Sbjct: 9 PIILQGPANQT-LAVDGTALLKCKAT----GDPLPVISWLKEGFTFPGRDPRATIQEQG- 62
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L+I +I DTG YTC AT+ G+ S L+
Sbjct: 63 -TLQIKNLRISDTGTYTCVATSSSGETSWSAVLD 95
Score = 54.3 bits (131), Expect = 5e-09
Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 5/81 (6%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
PP + L +A +C T DP + W G ++ + + G
Sbjct: 8 PPIILQGPANQT-LAVDGTALLKCKAT--GDPLPVISWLKEGFTFPGRDPRATIQEQG-- 62
Query: 468 VMDIAYVQSHDSGEYVCRAWN 488
+ I ++ D+G Y C A +
Sbjct: 63 TLQIKNLRISDTGTYTCVATS 83
Score = 53.2 bits (128), Expect = 1e-08
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVR 1609
P+ + P Q + A C + TG P P + WL G T R
Sbjct: 7 GPPIILQGPANQTLAVDGTALLKC-KATGDPLPVISWLKEGFTFPGRDPR 55
Score = 51.2 bits (123), Expect = 6e-08
Identities = 13/92 (14%), Positives = 27/92 (29%), Gaps = 21/92 (22%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P+ + + + C+ G DP + W G
Sbjct: 9 PIILQGPANQTLAVDGTALLKCKAT---------G----------DPLPVISWLKEGFTF 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
++ + + G + I ++ D+G Y C
Sbjct: 50 PGRDPRATIQEQG--TLQIKNLRISDTGTYTC 79
Score = 50.9 bits (122), Expect = 9e-08
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W P T + G L I D+G YT AT+S G + S L
Sbjct: 38 PVISWLKEGFTFPGRDPRATIQEQG--TLQIKNLRISDTGTYTCVATSSSGETSWSAVL 94
Score = 48.9 bits (117), Expect = 5e-07
Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W G P T + G L I ++G Y C AT+ G A L
Sbjct: 40 ISWLKEGFTFPGRDPRATIQEQGT--LQIKNLRISDTGTYTCVATSSSGETSWSAVL 94
Score = 45.5 bits (108), Expect = 7e-06
Identities = 16/112 (14%), Positives = 28/112 (25%), Gaps = 21/112 (18%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
PP + + T+ + + P + +
Sbjct: 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVIS--------WLKEGFTFPGRDPRA 56
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
I + G +L I + D G Y C A + GE A +
Sbjct: 57 T-----------IQEQG--TLQIKNLRISDTGTYTCVATSSSGETSWSAVLD 95
Score = 43.2 bits (102), Expect = 5e-05
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
+I + D G Y+C A + GE SA + V
Sbjct: 65 QIKNLRISDTGTYTCVATSSSGETSWSAVLDVTE 98
Score = 41.6 bits (98), Expect = 2e-04
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + +Q + LKC+ TG P
Sbjct: 7 GPPIILQGPANQTLAVDGTALLKCKATGDPL 37
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase,
heparin-binding, nucleotide-binding, immunoglobulin
domain, alternatice splicing; NMR {Mus musculus}
Length = 95
Score = 88.3 bits (219), Expect = 5e-21
Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 7/92 (7%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
L + L CRL D ++ W +G L +R + + +
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRCRLR---DDVQSINWLRDGVQLVESNRTRITGE----EV 62
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
E+ D DSGLY C ++ G TT + V
Sbjct: 63 EVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 71.4 bits (175), Expect = 6e-15
Identities = 17/93 (18%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFT 1799
P + S +++ G L + ++ + WL++G +++ R + E
Sbjct: 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDVQ-SINWLRDGVQLVESNRTRITGE----E 61
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
+ + +++ DSG Y CV + +G + V
Sbjct: 62 VEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 68.7 bits (168), Expect = 5e-14
Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 8/84 (9%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
QP ++SL + GD C + D + W +G + NR ++ +
Sbjct: 8 QPWGVPVEVESLL-VHPGDLLQLRC---RLRDDVQSINWLRDGVQLVESNRTRITGE--- 60
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF 490
+++ DSG Y C +
Sbjct: 61 -EVEVRDSIPADSGLYACVTSSPS 83
Score = 67.9 bits (166), Expect = 9e-14
Identities = 22/101 (21%), Positives = 36/101 (35%), Gaps = 10/101 (9%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
PE+ QP ++ + LV + C + D + W +G L NR
Sbjct: 4 PEQAQPWGVPVEV--ESLLVHPGDLLQLRC---RLRDDVQSINWLRDGVQLVESNRTRIT 58
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTT 1518
+ + P DSG Y C ++ G D T + +
Sbjct: 59 GEE----VEVRDSIPADSGLYACVTSSPSGSDTTYFSVNVS 95
Score = 66.0 bits (161), Expect = 3e-13
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 8/98 (8%)
Query: 702 EHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCD 761
E Q V + ++ + G+ RL D + W +G + +R R +
Sbjct: 5 EQAQPWGVPVEVESLL-VHPGDLLQLRCRLR---DDVQSINWLRDGVQLVESNRTRITGE 60
Query: 762 FGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
+E+ P D G Y+C + G T S+ V
Sbjct: 61 ----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 66.0 bits (161), Expect = 4e-13
Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
D I W ++GV L +R R T + + + DS +Y C ++ G +
Sbjct: 34 RDDVQSINWLRDGVQLVESNRTRITGE----EVEVRDSIPADSGLYACVTSSPSGSDTTY 89
Query: 65 CTLKI 69
++ +
Sbjct: 90 FSVNV 94
Score = 64.8 bits (158), Expect = 1e-12
Identities = 20/99 (20%), Positives = 35/99 (35%), Gaps = 7/99 (7%)
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
P + P ++L V + CRL D I+W +G +R +
Sbjct: 1 PTLPEQAQPWGVPVEVESLLVHPGDLLQLRCRL---RDDVQSINWLRDGVQLVESNRTRI 57
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ +++ DSG Y C ++ G+ T V
Sbjct: 58 TGE----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92
Score = 62.9 bits (153), Expect = 4e-12
Identities = 17/93 (18%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 1696
A+P +++ D + D +I W R+ + S +I T
Sbjct: 7 AQPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRI----TGEE 61
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
+ +R DSG++A + + G ++ V
Sbjct: 62 VEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 59.4 bits (144), Expect = 7e-11
Identities = 14/91 (15%), Positives = 33/91 (36%), Gaps = 7/91 (7%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
P + G++ + D ++ +L +G + S+R R
Sbjct: 9 PWGVPVEVESLLVHPGDLLQLRC---RLRDDVQSINWLRDGVQLVESNRTRITGE----E 61
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
+E+ + D+G+Y C ++ G ++
Sbjct: 62 VEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92
Score = 58.3 bits (141), Expect = 2e-10
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
++L V + CRL D I+W +G +R + + +++
Sbjct: 16 VESLLVHPGDLLQLRCRL---RDDVQSINWLRDGVQLVESNRTRITGE----EVEVRDSI 68
Query: 571 ARDSGEYICRATNKWGTAMTKAKV 594
DSG Y C ++ G+ T V
Sbjct: 69 PADSGLYACVTSSPSGSDTTYFSV 92
Score = 54.4 bits (131), Expect = 4e-09
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W +G +L +R R + +++ +SG+Y C ++ GSD T S+
Sbjct: 40 INWLRDGVQLVESNRTRITGE----EVEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92
Score = 52.9 bits (127), Expect = 2e-08
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 24/93 (25%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + + + CR+ D + W +G +
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRCRLR--------------------DDVQSINWLRDGVQL 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
NR ++ + +++ DSG Y C
Sbjct: 50 VESNRTRITGE----EVEVRDSIPADSGLYACV 78
Score = 51.3 bits (123), Expect = 6e-08
Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W + L + + T + +++ + DSG+Y ++ GS TT ++
Sbjct: 38 QSINWLRDGVQLVESNRTRITGEE----VEVRDSIPADSGLYACVTSSPSGSDTTYFSV 92
Score = 48.6 bits (116), Expect = 5e-07
Identities = 15/124 (12%), Positives = 31/124 (25%), Gaps = 52/124 (41%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVE---PRV-----------DPRLRVECSLSTAFFF 1308
+P E+ES+ V + ++ R+ + R R+
Sbjct: 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDVQSINWLRDGVQLVESNRTRITGE------- 60
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
+++ P D G Y C + G T
Sbjct: 61 -------------------------------EVEVRDSIPADSGLYACVTSSPSGSDTTY 89
Query: 1369 ATIS 1372
+++
Sbjct: 90 FSVN 93
Score = 42.5 bits (100), Expect = 8e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
E+ P D G Y+C + G T S+ V
Sbjct: 63 EVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94
Score = 38.2 bits (89), Expect = 0.002
Identities = 8/43 (18%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 1563 PVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
+ E+ V G+ + R+ + WL +G +V
Sbjct: 10 WGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVE 51
Score = 31.3 bits (71), Expect = 0.56
Identities = 7/33 (21%), Positives = 13/33 (39%)
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
Q + V ++ V G + L+CR+
Sbjct: 5 EQAQPWGVPVEVESLLVHPGDLLQLRCRLRDDV 37
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich,
IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 102
Score = 87.8 bits (218), Expect = 9e-21
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
+ ++ A C + V W+ +GK LS+ S+++ L
Sbjct: 12 AKEQPAHREVQAEAGASATLSCEVA---QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRL 68
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
+ ++G Y+C+A G S +L V G+
Sbjct: 69 VVQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQ 99
Score = 80.9 bits (200), Expect = 3e-18
Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 5/105 (4%)
Query: 1631 DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
S + +A A E + W+++ ++SS ++
Sbjct: 3 SGSSGKVVFAKEQPAHREVQAEAGASATLSCEV-AQAQTEVTWYKDGKKLSSSSKVRVEA 61
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQG 1735
L+++Q ++G ++ A G + S L V + G
Sbjct: 62 VGCTRRLVVQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQCFG 102
Score = 80.1 bits (198), Expect = 4e-18
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFT 1799
VV G A +++ + +V W K+GKK+ + +
Sbjct: 9 VVFAKEQPAHREVQAEAGASATLSCEVAQAQT-EVTWYKDGKKLSSSSKVRVEAVGCTRR 67
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
L++ +A ++G Y C AG + L V +
Sbjct: 68 LVVQQAGQAEAGEYSCE----AGGQQLSFRLQVAGQ 99
Score = 71.7 bits (176), Expect = 5e-15
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 9/99 (9%)
Query: 706 APVFTVPLSNIDDLR--EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
VF +++ G +A + + +V W+ +GK + + S+ R
Sbjct: 8 KVVFAKEQPAHREVQAEAGASATLSCEVA---QAQTEVTWYKDGKKLSSSSKVRVEAVGC 64
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L + + G+YSC A G S ++V G+
Sbjct: 65 TRRLVVQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQ 99
Score = 67.8 bits (166), Expect = 1e-13
Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 405 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
K K + ++ + G SA C V + +V W+ +GK + ++V++ +
Sbjct: 8 KVVFAKEQPAHREVQ-AEAGASATLSCE---VAQAQTEVTWYKDGKKLSSSSKVRVEAVG 63
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWN 488
+ + ++GEY C A
Sbjct: 64 CTRRLVVQQAGQAEAGEYSCEAGG 87
Score = 67.0 bits (164), Expect = 2e-13
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
A ++ W+K+G LS S++R L + ++ Y+C+A G +
Sbjct: 36 AQAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEA----GGQQLS 91
Query: 65 CTLKIEDR 72
L++ +
Sbjct: 92 FRLQVAGQ 99
Score = 62.0 bits (151), Expect = 1e-11
Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 22/101 (21%)
Query: 101 EPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVE 160
++VF +V+ + + C V + +V
Sbjct: 6 SGKVVF--AKEQPAHREVQAEAGASATLSCEV--------------------AQAQTEVT 43
Query: 161 WFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
W+ +GK + ++V++ + + + ++GEY C+
Sbjct: 44 WYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCE 84
Score = 60.9 bits (148), Expect = 3e-11
Identities = 13/102 (12%), Positives = 32/102 (31%), Gaps = 8/102 (7%)
Query: 1048 EEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY 1107
K ++ + C + + + W+ +G+ ++ S+V+
Sbjct: 6 SGKVVFAKEQPAHRE-VQAEAGASATLSCEV---AQAQTEVTWYKDGKKLSSSSKVRVEA 61
Query: 1108 DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L + ++GEY C A G ++ +
Sbjct: 62 VGCTRRLVVQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQ 99
Score = 59.7 bits (145), Expect = 7e-11
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 9/100 (9%)
Query: 1424 PPRFVTQIKT-QDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
F + ++ E S C+ V +V W+ +GK L ++
Sbjct: 8 KVVFAKEQPAHREVQAEAGASATLSCE---VAQAQTEVTWYKDGKKLSSSSKVRVEAVGC 64
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ ++GEY C A + L+ G+
Sbjct: 65 TRRLVVQQAGQAEAGEYSCEAGG----QQLSFRLQVAGQC 100
Score = 57.8 bits (140), Expect = 4e-10
Identities = 13/87 (14%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
P+ + C + + + W+ +G+ ++ S+V+ L +
Sbjct: 16 PAHREVQAEAGASATLSCEV---AQAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQ 72
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVI 595
++GEY C A G ++
Sbjct: 73 AGQAEAGEYSCEA----GGQQLSFRLQ 95
Score = 56.3 bits (136), Expect = 1e-09
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 3/75 (4%)
Query: 322 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
G A V V + +GK + +S ++R L + + G Y
Sbjct: 25 AGASATLSCE---VAQAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEY 81
Query: 382 TCRATNKWGQAEISV 396
+C A + + V
Sbjct: 82 SCEAGGQQLSFRLQV 96
Score = 50.5 bits (121), Expect = 2e-07
Identities = 10/50 (20%), Positives = 21/50 (42%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W+ + K L + +K + L + A ++G Y+ +A + S
Sbjct: 44 WYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGGQQLSFR 93
Score = 50.1 bits (120), Expect = 2e-07
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 4/63 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
V W+ +GKKL + R L + + +G Y C A G L+
Sbjct: 42 VTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEA----GGQQLSFRLQVA 97
Query: 663 SKT 665
+
Sbjct: 98 GQC 100
Score = 39.7 bits (93), Expect = 9e-04
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+ + G+YSC A G S ++V G+
Sbjct: 70 VQQAGQAEAGEYSCEA----GGQQLSFRLQVAGQ 99
Score = 36.6 bits (85), Expect = 0.009
Identities = 12/116 (10%), Positives = 19/116 (16%), Gaps = 48/116 (41%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAFFFP 1309
+ V + V + V ++RVE
Sbjct: 11 FAKEQPAHREVQAEAGASATLSCEVAQAQTEVTWYKDGKKLSSSSKVRVE---------- 60
Query: 1310 FINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
L + + GEY C A
Sbjct: 61 ------------------------AVGCTRRLVVQQAGQAEAGEYSCEAGGQQLSF 92
Score = 35.1 bits (81), Expect = 0.036
Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 12/72 (16%)
Query: 1556 DEKPKEAPVFVSQPEAQK---VQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
VF + A + + G A V + V W +G +K++
Sbjct: 2 SSGSSGKVVFAKEQPAHREVQAEAGASATLSCEVAQ-AQTEVTWYKDG--------KKLS 52
Query: 1613 ATETTEMEHKGK 1624
++ +E G
Sbjct: 53 SSSKVRVEAVGC 64
Score = 29.7 bits (67), Expect = 2.8
Identities = 6/37 (16%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 1846 GAAVAQDEAPTVAEP--LKDQNVKEGSAVTLKCRITG 1880
G++ + + E ++ + G++ TL C +
Sbjct: 1 GSSGSSGKVVFAKEQPAHREVQAEAGASATLSCEVAQ 37
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein,
skeletal muscle fast- isoform, MYBPCF, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 101
Score = 87.8 bits (218), Expect = 1e-20
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF----QI 1688
S + P + ++ + F D+ VE + + W + +T F +
Sbjct: 2 SSGSSGPVLIVTPLEDQQVFVGDRVEMAVEV-SEEGAQVMWMKNGVELTREDSFKARYRF 60
Query: 1689 HTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKR 1733
+ ILI V ED G + VI +C A L+VEEK+
Sbjct: 61 KKDGKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIVEEKQ 101
Score = 84.7 bits (210), Expect = 1e-19
Identities = 19/103 (18%), Positives = 31/103 (30%), Gaps = 11/103 (10%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAG----SRIKTIN 969
+T D + ++ + V W NG L+ +R +
Sbjct: 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVS---EEGAQVMWMKNGVELTREDSFKARYRFKK 62
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQ 1012
D IL +DV D G Y +L V+ +Q
Sbjct: 63 DGKRHILIFSDVVQEDRGRYQVITNG----GQCEAELIVEEKQ 101
Score = 83.9 bits (208), Expect = 3e-19
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD----IRYKTLEEDNL 1797
P +T + + VG ++S V W+KNG ++ + RY+ ++
Sbjct: 8 PVLIVTPLEDQQVFVGDRVEMAVEVSEEGA-QVMWMKNGVELTREDSFKARYRFKKDGKR 66
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
L+ + V ED G Y+ + +CEAEL+V+ K+
Sbjct: 67 HILIFSDVVQEDRGRYQVI----TNGGQCEAELIVEEKQ 101
Score = 70.8 bits (174), Expect = 1e-14
Identities = 21/101 (20%), Positives = 36/101 (35%), Gaps = 12/101 (11%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG----SRFRTFCDF 762
+ PL + + G+ ++ + +V W NG + +R+R D
Sbjct: 9 VLIVTPLEDQQ-VFVGDRVEMAVEVS---EEGAQVMWMKNGVELTREDSFKARYRFKKDG 64
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR 803
IL S V ED G+Y A + V+ K+
Sbjct: 65 KRHILIFSDVVQEDRGRYQVIT----NGGQCEAELIVEEKQ 101
Score = 67.7 bits (166), Expect = 1e-13
Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 8/85 (9%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI----FHKNRVKMVSD 463
P + ++ + + GD V++ +V W NG + K R + D
Sbjct: 8 PVLIVTPLEDQQ-VFVGDRVEMAVE---VSEEGAQVMWMKNGVELTREDSFKARYRFKKD 63
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWN 488
++ + V D G Y
Sbjct: 64 GKRHILIFSDVVQEDRGRYQVITNG 88
Score = 62.0 bits (151), Expect = 1e-11
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 24/97 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ ++ L D + + V V++ +V W NG +
Sbjct: 9 VLIVTPLEDQQVFVGDRVEMAVE--------------------VSEEGAQVMWMKNGVEL 48
Query: 169 ----FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
K R + D ++ + V D G Y
Sbjct: 49 TREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85
Score = 62.0 bits (151), Expect = 1e-11
Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 12/96 (12%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF--- 1480
P VT ++ Q Q+ + + V + +V W NG L ++ F Y F
Sbjct: 8 PVLIVTPLEDQ-QVFVGDRVEMAVE---VSEEGAQVMWMKNGVELTREDSFKARYRFKKD 63
Query: 1481 -GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ F V ED G Y + A L
Sbjct: 64 GKRHILIFSDVVQEDRGRYQVITNG----GQCEAEL 95
Score = 60.8 bits (148), Expect = 3e-11
Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 8/90 (8%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF----ATGSRVKTVYD 1108
P + + L+D V +V + S+ ++ W NG + +R + D
Sbjct: 8 PVLIVTPLED-QQVFVGDRVEMAVEV---SEEGAQVMWMKNGVELTREDSFKARYRFKKD 63
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTA 1138
L V D G Y A
Sbjct: 64 GKRHILIFSDVVQEDRGRYQVITNGGQCEA 93
Score = 59.7 bits (145), Expect = 6e-11
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 8/72 (11%)
Query: 5 ADPNLKIEWFKNGVPL----SLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
++ ++ W KNGV L S +R R D L + + +D Y
Sbjct: 33 SEEGAQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG---- 88
Query: 61 AVSTCTLKIEDR 72
L +E++
Sbjct: 89 GQCEAELIVEEK 100
Score = 52.3 bits (126), Expect = 3e-08
Identities = 16/88 (18%), Positives = 26/88 (29%), Gaps = 9/88 (10%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS----HRIRTVHAFGMVVL 368
L + G+ V ++ V ++ NG + R R +L
Sbjct: 13 TPLEDQQVFVGDRVEMAVE---VSEEGAQVMWMKNGVELTREDSFKARYRFKKDGKRHIL 69
Query: 369 EILGTKIEDTGVYTCRATNKWGQAEISV 396
ED G Y +AE+ V
Sbjct: 70 IFSDVVQEDRGRYQVITNGGQCEAELIV 97
Score = 51.2 bits (123), Expect = 6e-08
Identities = 14/80 (17%), Positives = 23/80 (28%), Gaps = 7/80 (8%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF----ATGSRVKTVYDFGFISLDMDY 568
+ V +V + S+ ++ W NG + +R + D L
Sbjct: 17 DQQVFVGDRVEMAVEV---SEEGAQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSD 73
Query: 569 VYARDSGEYICRATNKWGTA 588
V D G Y A
Sbjct: 74 VVQEDRGRYQVITNGGQCEA 93
Score = 46.9 bits (112), Expect = 3e-06
Identities = 18/109 (16%), Positives = 27/109 (24%), Gaps = 26/109 (23%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFINISTA 1316
P +T +E V + V V ++ VE + +F +
Sbjct: 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVS-EEGAQVMWMKNGVELTREDSFKARYRFKK-- 62
Query: 1317 FLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
D L V ED+G Y EA
Sbjct: 63 ------------------DGKRHILIFSDVVQEDRGRYQVITNGGQCEA 93
Score = 45.8 bits (109), Expect = 6e-06
Identities = 12/54 (22%), Positives = 16/54 (29%), Gaps = 4/54 (7%)
Query: 241 WFVNNKPLPAG----AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W N L A+++ D L ED G Y V + A
Sbjct: 41 WMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNGGQCEAE 94
Score = 42.3 bits (100), Expect = 9e-05
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
+ V+ E Q+V G+ V+ +VMW+ NG + E
Sbjct: 6 SGPVLIVTPLEDQQVFVGDRVEMAVEVSE-EGAQVMWMKNGVELTRE 51
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/61 (26%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 603 VEWFYNGKKLP----HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKAS 658
V W NG +L RYR D IL +E+ G Y+ +A
Sbjct: 39 VMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVITNG----GQCEAE 94
Query: 659 L 659
L
Sbjct: 95 L 95
Score = 36.5 bits (85), Expect = 0.011
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ PL+DQ V G V + ++ +
Sbjct: 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG 36
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein
C, immunoglobulin domain, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2yxm_A
Length = 100
Score = 87.4 bits (217), Expect = 1e-20
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 1736 GRGGVVPPSFLTTISSAV-INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEE 1794
G G +F + A ++ G RF +++ K +V W KNG++I P +Y +
Sbjct: 1 GSSGSSGAAFAKILDPAYQVDKGGRVRFVVELADPKL-EVKWYKNGQEIRPSTKYIFEHK 59
Query: 1795 DNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPG 1839
L I + D Y AG+ +C EL V+S + G
Sbjct: 60 GCQRILFINNCQMTDDSEYYVT----AGDEKCSTELFVRSGPSSG 100
Score = 87.4 bits (217), Expect = 1e-20
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 6/97 (6%)
Query: 1637 AKPPVFTKKIQPC-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS 1695
+ F K + P + + + RF VE DP +KW++ I S + +
Sbjct: 5 SSGAAFAKILDPAYQVDKGGRVRFVVEL-ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
IL + M D + V A G KCS L V
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSG 96
Score = 81.7 bits (202), Expect = 1e-18
Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 8/95 (8%)
Query: 916 APEFLTTPTDLTLA-ESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
F + F L DP + V+W+ NG+ + ++ +
Sbjct: 7 GAAFAKILDPAYQVDKGGRVRFVVELA---DPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
IL IN+ + D Y A G+ S +L V+
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVR 94
Score = 78.6 bits (194), Expect = 2e-17
Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 7/95 (7%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
F L + +G F L DPKL+V+W+ NG+ ++ +++
Sbjct: 7 GAAFAKILDPAYQVDKGGRVRFVVELA---DPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
IL I+ D +Y A G+ S + V+
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVR 94
Score = 73.6 bits (181), Expect = 1e-15
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
S F + + G F + DP+L+V+W+ NG+ I +
Sbjct: 3 SGSSGAAFAKILDPAYQVDKGGRVRFVVE---LADPKLEVKWYKNGQEIRPSTKYIFEHK 59
Query: 464 FGFVVMDIAYVQSHDSGEYVCRA 486
++ I Q D EY A
Sbjct: 60 GCQRILFINNCQMTDDSEYYVTA 82
Score = 70.5 bits (173), Expect = 1e-14
Identities = 18/97 (18%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
F L V + G+V F L +DP + + W+ NG+ ++ +
Sbjct: 7 GAAFAKILDPAYQVDKGGRVRFVVEL---ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L ++ D EY A G ++ ++
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSG 96
Score = 64.7 bits (158), Expect = 1e-12
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
ADP L+++W+KNG + ++ L IN+ + D + Y A G+ +
Sbjct: 33 ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCS 88
Query: 65 CTLKIED 71
L +
Sbjct: 89 TELFVRS 95
Score = 64.3 bits (157), Expect = 2e-12
Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 7/98 (7%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
F + Q+ + +F + + DP ++V+W+ NG+ + ++ +
Sbjct: 7 GAAFAKILDPAYQVDKGGRVRFVVE---LADPKLEVKWYKNGQEIRPSTKYIFEHKGCQR 63
Query: 1484 AMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ D EY A G ++ L P
Sbjct: 64 ILFINNCQMTDDSEYYVTA----GDEKCSTELFVRSGP 97
Score = 63.6 bits (155), Expect = 3e-12
Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 21/94 (22%)
Query: 109 PVFISHLND-VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
F L+ + + V F + DP+L+V+W+ NG+
Sbjct: 8 AAFAKILDPAYQVDKGGRVRFVVEL--------------------ADPKLEVKWYKNGQE 47
Query: 168 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
I + ++ I Q D EY
Sbjct: 48 IRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVT 81
Score = 58.9 bits (143), Expect = 1e-10
Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
F+ + +G F + D + V++ NG+ I S + H +
Sbjct: 8 AAFAKILDPAYQVDKGGRVRFVVE---LADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRI 64
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISV 396
L I ++ D Y A ++ E+ V
Sbjct: 65 LFINNCQMTDDSEYYVTAGDEKCSTELFV 93
Score = 58.5 bits (142), Expect = 2e-10
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 7/85 (8%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
V + G+V F L +DP + + W+ NG+ ++ + L ++
Sbjct: 15 DPAYQVDKGGRVRFVVEL---ADPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQ 71
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI 595
D EY A G ++
Sbjct: 72 MTDDSEYYVTA----GDEKCSTELF 92
Score = 47.8 bits (114), Expect = 1e-06
Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V+W+ NG+++ +Y H IL I C + Y A G + L
Sbjct: 39 VKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA----GDEKCSTELF 92
Score = 47.8 bits (114), Expect = 1e-06
Identities = 12/51 (23%), Positives = 18/51 (35%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
+W+ N + + K+ H L I D Y V A + K S
Sbjct: 40 KWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTAGDEKCSTE 90
Score = 40.1 bits (94), Expect = 6e-04
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 1561 EAPVFVSQ-PEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM 1619
F A +V +G RF + P+ V W NG ++I +
Sbjct: 6 SGAAFAKILDPAYQVDKGGRVRFVVEL-ADPKLEVKWYKNG--------QEIRPSTKYIF 56
Query: 1620 EHKGKIQ 1626
EHKG +
Sbjct: 57 EHKGCQR 63
Score = 37.4 bits (87), Expect = 0.005
Identities = 15/132 (11%), Positives = 26/132 (19%), Gaps = 53/132 (40%)
Query: 1262 EEPPRFITEIES-VTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAF 1306
F ++ V + VRF + + V + E
Sbjct: 5 SSGAAFAKILDPAYQVDKGGRVRFVVELADPKLEVKWYKNGQEIRPSTKYIFE------- 57
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
L I+ D EY A G+
Sbjct: 58 ---------------------------HKGCQRILFINNCQMTDDSEYYVTA----GDEK 86
Query: 1367 TKATISCKKIPT 1378
+ + P+
Sbjct: 87 CSTELFVRSGPS 98
Score = 31.2 bits (71), Expect = 0.62
Identities = 5/34 (14%), Positives = 9/34 (26%), Gaps = 1/34 (2%)
Query: 1850 AQDEAPTVAEPLKDQ-NVKEGSAVTLKCRITGKP 1882
+ A+ L V +G V +
Sbjct: 3 SGSSGAAFAKILDPAYQVDKGGRVRFVVELADPK 36
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage
capsid decorative protein, interaction with bacteria;
1.95A {Enterobacteria phage RB49}
Length = 304
Score = 93.7 bits (232), Expect = 1e-20
Identities = 48/311 (15%), Positives = 82/311 (26%), Gaps = 52/311 (16%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTG-YPRPRVM---WLINGHTIVNEIVRKITAT--- 1614
A Q + G+ V G P P + W + N TAT
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN-----TATLTV 56
Query: 1615 ETTEMEHKGKIQERVVDA-----------SEKPAKPPVFTKKIQPCRAFEQDQARFEVEF 1663
E+ G + V D + A+ V + Q Q
Sbjct: 57 ADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATV 116
Query: 1664 D---GDPLP-----TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 1715
G W + + I ++ D I F+ + +GV+ V
Sbjct: 117 KFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTA-----------DKNGVYTVKVW 165
Query: 1716 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDV- 1774
+ SA+ + VV + + +N S L +
Sbjct: 166 GESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIK 225
Query: 1775 ---YWLKNGKKIIPDIRYKTLEEDNLFT------LLIIEAVVEDSGAYECVAMNNAGEAR 1825
Y + G+ I + E F+ L A +D+ + CVA
Sbjct: 226 YNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIED 285
Query: 1826 CEAELVVQSKK 1836
E+ + +
Sbjct: 286 ETVEVAASTSR 296
Score = 89.1 bits (220), Expect = 5e-19
Identities = 33/254 (12%), Positives = 70/254 (27%), Gaps = 57/254 (22%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP---TIKWFREDFPITSSPDFQIHTFSTK 1694
+ + D GD PLP T W ++D P ++
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNT---------- 51
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVI 1754
+ L + E++G + V ++ + + + E+ +T +
Sbjct: 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEA-------ELIVNITEPQHFYV 104
Query: 1755 NVGQLARFDAKISAT--------KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAV 1806
+ A + + L W K I D + I E
Sbjct: 105 SSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVI-----------DTTQDITIQEFT 153
Query: 1807 VEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNV 1866
+ +G Y + ++ A + V QD ++ + V
Sbjct: 154 ADKNGVYTVKVWGESEDSAASASTKIM----------LATMNVDQD-------VVESKTV 196
Query: 1867 KEGSAVTLKCRITG 1880
G+ ++L ++
Sbjct: 197 ALGNEISLNYVVSE 210
Score = 86.8 bits (214), Expect = 3e-18
Identities = 34/319 (10%), Positives = 78/319 (24%), Gaps = 51/319 (15%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASL--IPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
S+Q G+ A++ +T + + +P E +
Sbjct: 3 FTVSIQSNK-RCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTAT-------- 53
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGD 425
L + E+ G Y + + + +++ + + + +
Sbjct: 54 --LTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEE--AELIVNITEPQHFY-VSSQT 108
Query: 426 SAHFECTLT------PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDS 479
T+ P ++ EL W I + I + +
Sbjct: 109 DVELHATVKFSGGKTPADNYELHYSWSKGEDVID-----------TTQDITIQEFTADKN 157
Query: 480 GEYVCRAWNNF----------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE 529
G Y + W I + + + + +
Sbjct: 158 GVYTVKVWGESEDSAASASTKIMLATMNVDQDVVESKTVALGNEISLNYVVSEDIVGDSS 217
Query: 530 PKSDPTMRIDWFFNG----RPFATGSRVKTVYDFGFISLDMDYVYAR----DSGEYICRA 581
+ T++ +W+ P GS V + I+ D D+ ++ C A
Sbjct: 218 GMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVA 277
Query: 582 TNKWGTAMTKAKVICKVLT 600
+V
Sbjct: 278 KLYQQIEDETVEVAASTSR 296
Score = 83.3 bits (205), Expect = 4e-17
Identities = 26/272 (9%), Positives = 72/272 (26%), Gaps = 58/272 (21%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W +++P L + A +E++G Y V ++ + +
Sbjct: 39 TWTKDDQPHENNTA----------TLTVADATSENAGSYKVTVQDTDTMTSVESEV---- 84
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLI------PVGDQTMTVEFLYNGKPIEA 353
+ + ++ +S A++ P + + + I+
Sbjct: 85 -FLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT 143
Query: 354 SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTS 413
+ + I + GVYT + + + S + + +
Sbjct: 144 TQD-----------ITIQEFTADKNGVYTVKVWGESEDSAASASTKIM-----LATMNVD 187
Query: 414 HIKSLEG-LKDGDSAHFECTL--------TPVNDPELKVEWFHN----------GKPIFH 454
+ G+ + + + + +K W+ G +
Sbjct: 188 QDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGE 247
Query: 455 KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 486
++ G + D+ ++ C A
Sbjct: 248 ALEGFSITPDGHLF--KESATYDDTAKFWCVA 277
Score = 78.7 bits (193), Expect = 1e-15
Identities = 19/238 (7%), Positives = 47/238 (19%), Gaps = 69/238 (28%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
A + ++T W + + +
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTAT-------- 53
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQK 1033
L + D ++G Y + + ++ +
Sbjct: 54 --LTVADATSENAGSYKVTVQDTDTMTSVESEVFLM------------------------ 87
Query: 1034 LEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE------PKSDPTMR 1087
E+ V ++ Q + V V ++ P + +
Sbjct: 88 ---------------EEAELIVNITEPQ-HFYVSSQTDVELHATVKFSGGKTPADNYELH 131
Query: 1088 IDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
W T + + A +G Y + + + A
Sbjct: 132 YSWSKGEDVIDTTQ-----------DITIQEFTADKNGVYTVKVWGESEDSAASASTK 178
Score = 74.5 bits (182), Expect = 4e-14
Identities = 20/144 (13%), Positives = 44/144 (30%), Gaps = 30/144 (20%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKP----LDVYWLKNGKKIIPDIRYKTLEEDN 1796
+ + + G A ++ +P L W K+ + E+N
Sbjct: 1 MAFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPH----------ENN 50
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
TL + +A E++G+Y+ + E+E+ + + + E
Sbjct: 51 TATLTVADATSENAGSYKVTVQDTDTMTSVESEVFL----------------MEEAELIV 94
Query: 1857 VAEPLKDQNVKEGSAVTLKCRITG 1880
+ V + V L +
Sbjct: 95 NITEPQHFYVSSQTDVELHATVKF 118
Score = 71.8 bits (175), Expect = 3e-13
Identities = 26/253 (10%), Positives = 61/253 (24%), Gaps = 58/253 (22%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLT------PTNDPSMTVEWFHNGKALSAGSRIKTIND 970
+T P ++ T + P ++ + W +
Sbjct: 93 IVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQD------ 146
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKN 1030
+ I + +G+YT K + ++ S + + ++
Sbjct: 147 -----ITIQEFTADKNGVYTVKVWGESEDSAASASTKI-------MLATMNV-------- 186
Query: 1031 IQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 1090
++ T L + + + + T++ +W
Sbjct: 187 ------------------DQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNW 228
Query: 1091 FFNG----RPFATGSRVKTVYDFGFISLDMDYVYAR----DSGEYICRATNKWGTAMTKA 1142
+ P GS V + I+ D D+ ++ C A
Sbjct: 229 YLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETV 288
Query: 1143 KVICKAKHDIVTE 1155
+V E
Sbjct: 289 EVAASTSRKCSME 301
Score = 65.6 bits (159), Expect = 3e-11
Identities = 25/215 (11%), Positives = 49/215 (22%), Gaps = 49/215 (22%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLT--PVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
+ L GD T+ L W + +P + V+D
Sbjct: 2 AFTVSIQSNKRCFLA-GDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVAD-- 58
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPFPIFIFHQIRLPSPSQDNL 514
S ++G Y + + + I P +
Sbjct: 59 --------ATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNI------TEPQ--HF 102
Query: 515 DVPEAGKVHFDCRLE------PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY 568
V V ++ P + + W T + +
Sbjct: 103 YVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQE 151
Query: 569 VYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
A +G Y + + + A + T+ V
Sbjct: 152 FTADKNGVYTVKVWGESEDSAASASTKIMLATMNV 186
Score = 64.1 bits (155), Expect = 1e-10
Identities = 38/344 (11%), Positives = 82/344 (23%), Gaps = 92/344 (26%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLT--PTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
A ++ + G+ A + L W + +P + +
Sbjct: 2 AFTVSIQSNKRC-FLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTA-------- 52
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVF----I 819
L ++ E+ G Y + + + + + +I+ P+ V +
Sbjct: 53 --TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDV 110
Query: 820 SFH----------------------------------EISPVYPEDCGQYSCRAYNDYGE 845
H I + G Y+ + + + +
Sbjct: 111 ELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQDITIQEFTADKNGVYTVKVWGESED 170
Query: 846 AVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHER 905
+ SAS K+ + + K L + D + + G
Sbjct: 171 SAASASTKIMLATMNV-------DQDVVESKTVALGNEISLNYVVSEDIVGDSSGMP--- 220
Query: 906 EDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRI 965
+LT+ + E +L+PT S E G
Sbjct: 221 -------------------NLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGH-- 259
Query: 966 KTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
L D+ + C A + ++
Sbjct: 260 ----------LFKESATYDDTAKFWCVAKLYQQIEDETVEVAAS 293
Score = 62.2 bits (150), Expect = 5e-10
Identities = 35/328 (10%), Positives = 74/328 (22%), Gaps = 76/328 (23%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKP 167
+ N + V L W + +P
Sbjct: 2 AFTVSIQSNKRCFLAGDGFTLTATV---------------AGDEPLPSNLTYTWTKDDQP 46
Query: 168 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ-----------------WFVNNKPLP 210
+ V+D S ++G Y
Sbjct: 47 HENNTATLTVAD----------ATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNI 96
Query: 211 AGAKFKTTHDFGYVALDIELMLKTLVPFTE-------WFVNNKPLPAGAKFKTTHDFGYV 263
+ V L + + W +
Sbjct: 97 TEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ----------- 145
Query: 264 ALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER-LFVNHNYPLFSLQFQHLSNLSE 322
+ I A+ +G+YTVK + S + K + + V+ + S + +S
Sbjct: 146 DITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDVVE-SKTVALGNEISL 204
Query: 323 GEIAHFEASLIPVGDQTMTVEF------------LYNGKPIEASHRIRTVHAFGMVVLEI 370
+ + G +T+++ G + + ++ G L
Sbjct: 205 NYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDG--HLFK 262
Query: 371 LGTKIEDTGVYTCRATNKWGQAEISVNL 398
+DT + C A + +V +
Sbjct: 263 ESATYDDTAKFWCVAKLYQQIEDETVEV 290
Score = 60.6 bits (146), Expect = 1e-09
Identities = 23/195 (11%), Positives = 45/195 (23%), Gaps = 65/195 (33%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
NL W K+ P + TL++ ++++ Y +
Sbjct: 34 SNLTYTWTKDDQPHENNTA----------TLTVADATSENAGSYKVTVQDTDTMTSVESE 83
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ + + + E V I+ +V
Sbjct: 84 VFL---------------------------MEEAEL------IVNITEPQHFYVSSQTDV 110
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
V+ S TP ++ EL W I +
Sbjct: 111 ELHATVKFSGGK-----------TPADNYELHYSWSKGEDVI-----------DTTQDIT 148
Query: 187 IAYVQSHDSGEYVCQ 201
I + +G Y +
Sbjct: 149 IQEFTADKNGVYTVK 163
Score = 59.5 bits (143), Expect = 3e-09
Identities = 20/171 (11%), Positives = 43/171 (25%), Gaps = 57/171 (33%)
Query: 636 EENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRR 695
EN+G Y+ + ++
Sbjct: 61 SENAGSYKVTVQDTDTMTSVES-------------------------------------- 82
Query: 696 TETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLT------PTDDPKLKVEWFWNGKP 749
E +E + V + + + A + P D+ +L W
Sbjct: 83 -EVFLMEEAELIVNITEPQHFY-VSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDV 140
Query: 750 MKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ T + I + G Y+ + + + ++ SAS K+
Sbjct: 141 IDTTQD-----------ITIQEFTADKNGVYTVKVWGESEDSAASASTKIM 180
Score = 55.6 bits (133), Expect = 6e-08
Identities = 40/312 (12%), Positives = 77/312 (24%), Gaps = 81/312 (25%)
Query: 534 PTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAK 593
+ W + +P + TV D + ++G Y + +++
Sbjct: 34 SNLTYTWTKDDQPHENNTATLTVAD----------ATSENAGSYKVTVQDTDTMTSVESE 83
Query: 594 ---VICKVLTVIVE-------------------WFYNGKKLPHGH--RYRTFHDFGIV-- 627
+ L V + F GK + Y ++
Sbjct: 84 VFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT 143
Query: 628 --ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQ 685
+ I + +GVY + + AS K + T
Sbjct: 144 TQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLAT-------------------- 183
Query: 686 TLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFW 745
+++ TV L N L + + + +K W+
Sbjct: 184 -------------MNVDQDVVESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYL 230
Query: 746 NGK----PMKTGSRFRTFCDFGFVI-----LEISPVYPEDCGQYSCRAYNDYGEAVTSAS 796
+ P GS GF I L +D ++ C A +
Sbjct: 231 QREGQLSPTLIGSEV-GEALEGFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVE 289
Query: 797 MKVQGKRSIILE 808
+ R +E
Sbjct: 290 VAASTSRKCSME 301
Score = 54.8 bits (131), Expect = 1e-07
Identities = 21/209 (10%), Positives = 50/209 (23%), Gaps = 66/209 (31%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P + L W K + ++I AD + +YT K ++
Sbjct: 124 PADNYELHYSWSKGEDVID-----------TTQDITIQEFTADKNGVYTVKVWGESEDSA 172
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
++ + KI + D V +
Sbjct: 173 ASASTKI------------------------------MLATMNVDQDV----VESKTVAL 198
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN----------GKPIFHKN 172
+ + V ++ + + + +K W+ G +
Sbjct: 199 GNEISLNYVVS---------EDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEAL 249
Query: 173 RVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
++ G + D+ ++ C
Sbjct: 250 EGFSITPDGHLF--KESATYDDTAKFWCV 276
Score = 51.8 bits (123), Expect = 1e-06
Identities = 32/340 (9%), Positives = 69/340 (20%), Gaps = 87/340 (25%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDP---NMKVEWFLNGKPLPHKNRFNPIYDF 1480
Q + + +P N+ W + +P + + D
Sbjct: 2 AFTVSIQSNKR-CFLAGDGFTLTAT-VAGDEPLPSNLTYTWTKDDQPHENNTATLTVAD- 58
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
E++G Y + M + + +
Sbjct: 59 ---------ATSENAGSYKVTVQDTDTMTSVESEVFLMEEA------------------- 90
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF---CTRVTGYPRPRVM-- 1595
E V +++P+ V G
Sbjct: 91 --------------------ELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYEL 130
Query: 1596 ---WLINGHTIVNEIVRKIT-ATETTEMEHK-------GKIQER----VVDASEKPAKPP 1640
W I I T + ++ A+ +
Sbjct: 131 HYSWSKGEDVIDTTQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMNVDQDV 190
Query: 1641 VFTKKIQPCRAFE---QDQARFEVEFDGDPLPTIK--WFRED--------FPITSSPDFQ 1687
V +K + + G P TIK W+ + +
Sbjct: 191 VESKTVALGNEISLNYVVSEDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALE 250
Query: 1688 IHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANL 1727
+ + L +D+ F +A+ + +
Sbjct: 251 GFSITPDGHLFKESATYDDTAKFWCVAKLYQQIEDETVEV 290
Score = 44.0 bits (103), Expect = 3e-04
Identities = 11/191 (5%), Positives = 33/191 (17%), Gaps = 63/191 (32%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L + E+ G Y + ++ + +
Sbjct: 53 TLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAE--------------------- 91
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQL------APVG 1453
+T+ + + + + P
Sbjct: 92 ------------------------LIVNITEPQHF-YVSSQTDVELHATVKFSGGKTPAD 126
Query: 1454 DPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRA 1513
+ + W + + + +G Y + A
Sbjct: 127 NYELHYSWSKGEDVID-----------TTQDITIQEFTADKNGVYTVKVWGESEDSAASA 175
Query: 1514 ILKTTGKPGII 1524
K +
Sbjct: 176 STKIMLATMNV 186
Score = 39.4 bits (91), Expect = 0.008
Identities = 26/260 (10%), Positives = 58/260 (22%), Gaps = 75/260 (28%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNF 1322
E ITE + V V V+ L ++ I T
Sbjct: 91 ELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT------ 144
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
+ I + G Y + + + ++ A+
Sbjct: 145 ----------------QDITIQEFTADKNGVYTVKVWGESEDSAASASTKIMLATMN--- 185
Query: 1383 NQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQS 1442
++ + + L + S
Sbjct: 186 ------------------------------------VDQDVVESKTVALGNEISLNYVVS 209
Query: 1443 TKFECQLAPVGDPNMKVEWFL--NGKPLP---------HKNRFNPIYDFGYVAMNFGWVY 1491
+ + + +K W+L G+ P F+ D +
Sbjct: 210 EDIVGDSSGMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKES---AT 266
Query: 1492 PEDSGEYLCRATNLYGMDET 1511
+D+ ++ C A +++
Sbjct: 267 YDDTAKFWCVAKLYQQIEDE 286
Score = 34.4 bits (78), Expect = 0.34
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 3 PRADPNLKIEWFKNG----VPLSLGSRIRSTFDFGLVT----LSINSLRADDSAIYTCKA 54
+ +K W+ P +GS + + +T L S DD+A + C A
Sbjct: 218 GMPNLTIKYNWYLQREGQLSPTLIGSEVGEALEGFSITPDGHLFKESATYDDTAKFWCVA 277
Query: 55 TNLLGEAVSTCTL 67
T +
Sbjct: 278 KLYQQIEDETVEV 290
Score = 31.3 bits (70), Expect = 3.0
Identities = 4/43 (9%), Positives = 12/43 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
L + +D ++ C A ++ ++
Sbjct: 259 HLFKESATYDDTAKFWCVAKLYQQIEDETVEVAASTSRKCSME 301
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle,
hypertrophic cardiomyopathy, actin-binding, cell
adhesion, disease mutation; NMR {Homo sapiens}
Length = 95
Score = 87.4 bits (217), Expect = 1e-20
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS 1692
+KP F+KK + A FE E + ++W R I++S + + T
Sbjct: 4 GKKP--VSAFSKKPRSVEVAAGSPAVFEAETERAG-VKVRWQRGGSDISASNKYGLATEG 60
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
T+ L +R+V D G +AVIA G +K +L V E
Sbjct: 61 TRHTLTVREVGPADQGSYAVIA----GSSKVKFDLKVIE 95
Score = 85.5 bits (212), Expect = 5e-20
Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
F P + +A + A FE + V W G +SA ++ + L
Sbjct: 9 SAFSKKPRSVEVAAGSPAVFEAETE---RAGVKVRWQRGGSDISASNKYGLATEGTRHTL 65
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+ +V D G Y A G + L V
Sbjct: 66 TVREVGPADQGSYAVIA----GSSKVKFDLKVI 94
Score = 78.9 bits (195), Expect = 1e-17
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
+F S + G A F+A+ V W + G I +Y E TL
Sbjct: 8 VSAFSKKPRSVEVAAGSPAVFEAETERAGV-KVRWQRGGSDISASNKYGLATEGTRHTLT 66
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ E D G+Y + AG ++ + +L V
Sbjct: 67 VREVGPADQGSYAVI----AGSSKVKFDLKVI 94
Score = 73.5 bits (181), Expect = 7e-16
Identities = 20/94 (21%), Positives = 35/94 (37%), Gaps = 8/94 (8%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
F+ +++ + G A FEA +KV W G + +++ +
Sbjct: 9 SAFSKKPRSVE-VAAGSPAVFEAETE---RAGVKVRWQRGGSDISASNKYGLATEGTRHT 64
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L + V P D G Y+ A G + +KV
Sbjct: 65 LTVREVGPADQGSYAVIA----GSSKVKFDLKVI 94
Score = 70.4 bits (173), Expect = 9e-15
Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSD 463
K F+ +S+E + G A FE +KV W G I N+ + ++
Sbjct: 4 GKKPVSAFSKKPRSVE-VAAGSPAVFEAE---TERAGVKVRWQRGGSDISASNKYGLATE 59
Query: 464 FGFVVMDIAYVQSHDSGEYVCRA 486
+ + V D G Y A
Sbjct: 60 GTRHTLTVREVGPADQGSYAVIA 82
Score = 66.6 bits (163), Expect = 3e-13
Identities = 17/110 (15%), Positives = 36/110 (32%), Gaps = 15/110 (13%)
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
P+ K F+ + + ++V F+ +++ W G + ++
Sbjct: 1 PEPGKKPVSAFSKKPRS-VEVAAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGL 56
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTE 1155
+ +L + V D G Y A G++ K + V E
Sbjct: 57 ATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDL-------KVIE 95
Score = 65.4 bits (160), Expect = 7e-13
Identities = 15/93 (16%), Positives = 23/93 (24%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
F VE F+ E +KV W G I
Sbjct: 9 SAFSKKPRSVEVAAGSPAVFEAETE--------------------RAGVKVRWQRGGSDI 48
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
N+ + ++ + + V D G Y
Sbjct: 49 SASNKYGLATEGTRHTLTVREVGPADQGSYAVI 81
Score = 64.7 bits (158), Expect = 1e-12
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 8/99 (8%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
EP KK F + ++ ++ FE + +KV W G + N++
Sbjct: 2 EPGKKPVSAFSKKPRSV-EVAAGSPAVFEAE---TERAGVKVRWQRGGSDISASNKYGLA 57
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ + V P D G Y A G + + LK
Sbjct: 58 TEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLK 92
Score = 59.7 bits (145), Expect = 7e-11
Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+K+ W + G +S ++ + TL++ + D Y A G +
Sbjct: 33 ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVK 88
Query: 65 CTLKIE 70
LK+
Sbjct: 89 FDLKVI 94
Score = 55.8 bits (135), Expect = 1e-09
Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 12/90 (13%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+++V F+ +++ W G + ++ + +L + V
Sbjct: 17 SVEVAAGSPAVFEAET---ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPA 73
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVLTVI 602
D G Y A G++ K L VI
Sbjct: 74 DQGSYAVIA----GSSKVKFD-----LKVI 94
Score = 53.9 bits (130), Expect = 7e-09
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 5/84 (5%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILG 372
+ ++ G A FEA + V + G I AS++ L +
Sbjct: 13 KKPRSVEVAAGSPAVFEAE---TERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVRE 69
Query: 373 TKIEDTGVYTCRATNKWGQAEISV 396
D G Y A + + ++ V
Sbjct: 70 VGPADQGSYAVIAGSSKVKFDLKV 93
Score = 48.5 bits (116), Expect = 5e-07
Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W G + ++Y + L + + G Y A GS K LK
Sbjct: 39 VRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----GSSKVKFDLK 92
Score = 48.1 bits (115), Expect = 7e-07
Identities = 11/50 (22%), Positives = 16/50 (32%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W + A K+ + L + D G Y V A +SK
Sbjct: 41 WQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIAGSSKVKFD 90
Score = 42.7 bits (101), Expect = 6e-05
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 1557 EKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
+KP F +P + +V G PA F +V W G I
Sbjct: 5 KKPV--SAFSKKPRSVEVAAGSPAVFEAETER-AGVKVRWQRGGSDISA 50
Score = 41.6 bits (98), Expect = 2e-04
Identities = 25/126 (19%), Positives = 38/126 (30%), Gaps = 39/126 (30%)
Query: 1252 PEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAF 1306
PE ++ F + SV V P FE E R ++R + S S
Sbjct: 1 PEPGKKP-----VSAFSKKPRSVEVAAGSPAVFEAETE-RAGVKVRWQRGGSDISAS--- 51
Query: 1307 FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
++T + +L + V P DQG Y A G +
Sbjct: 52 --NKYGLAT-------------------EGTRHTLTVREVGPADQGSYAVIA----GSSK 86
Query: 1367 TKATIS 1372
K +
Sbjct: 87 VKFDLK 92
Score = 34.2 bits (79), Expect = 0.064
Identities = 3/28 (10%), Positives = 7/28 (25%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
++ + V GS +
Sbjct: 9 SAFSKKPRSVEVAAGSPAVFEAETERAG 36
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA,
receptor-ligand complex transferase; HET: NAG NDG MAN
BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Length = 347
Score = 94.0 bits (233), Expect = 2e-20
Identities = 26/203 (12%), Positives = 54/203 (26%), Gaps = 22/203 (10%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 1699
P ++ D + +G L W + +++ + + + +
Sbjct: 159 PTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSAT-VMKSGGLPSLGLTLA 217
Query: 1700 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQL 1759
+ AEN G+A+ S + V SF ++
Sbjct: 218 NVTSDLNRKNVTCWAENDVGRAEVSVQVNV--------------SFPASVQLHTAVEMHH 263
Query: 1760 ARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLF-------TLLIIEAVVEDSGA 1812
+ + WL NG + T + L + + ++G
Sbjct: 264 WCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGN 323
Query: 1813 YECVAMNNAGEARCEAELVVQSK 1835
Y +A N G+A
Sbjct: 324 YTLLAANPFGQASASIMAAFMDN 346
Score = 85.2 bits (210), Expect = 2e-17
Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 20/191 (10%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRK-------IT 1612
P Q V G+ C +V G + W++ +++ +T
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRC-QVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLT 215
Query: 1613 ATETTEMEHKGKIQ---ERVVDASEKPAKPPV-FTKKIQPCRAFEQDQARFEVEFDGDPL 1668
T ++ + E V +E + V F +Q A E DG P
Sbjct: 216 LANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPA 275
Query: 1669 PTIKWFREDFPITSSPDFQIHTFSTK-------SILIMRQVFMEDSGVFAVIAENRGGKA 1721
P+++W + + L + Q ++G + ++A N G+A
Sbjct: 276 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 335
Query: 1722 KCSANLVVEEK 1732
S +
Sbjct: 336 SASIMAAFMDN 346
Score = 80.9 bits (199), Expect = 4e-16
Identities = 30/219 (13%), Positives = 49/219 (22%), Gaps = 36/219 (16%)
Query: 473 YVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKS 532
+ + G + + + N V V C++E
Sbjct: 127 WEEEGLGGVPEQKLQCHGQGPLAHMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVE--G 184
Query: 533 DPTMRIDWFFN-GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
+ W AT + + G + + C A N G A
Sbjct: 185 RGLEQAGWILTELEQSATVMKSGGLPSLG--LTLANVTSDLNRKNVTCWAENDVGRAEVS 242
Query: 592 AKV------------------ICKVLTVI------VEWFYNGKKLPHGHRYRTFHDFGIV 627
+V C +V + W +NG L T
Sbjct: 243 VQVNVSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAA 302
Query: 628 I-------LDILYCYEENSGVYECRATNKYGSDVTKASL 659
L + N+G Y A N +G
Sbjct: 303 NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 341
Score = 77.5 bits (190), Expect = 6e-15
Identities = 41/335 (12%), Positives = 82/335 (24%), Gaps = 56/335 (16%)
Query: 295 LKCLERLFVNHNYPLFSLQ---FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPI 351
+ L L++ + L L+ + L L I + F +
Sbjct: 30 AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD----AFHFTPRLSRL 85
Query: 352 EASH-RIRTVH--AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG-- 406
S + ++ + L+ L C +W Q L V + K
Sbjct: 86 NLSFNALESLSWKTVQGLSLQELVL---SGNPLHCSCALRWLQRWEEEGLGGVPEQKLQC 142
Query: 407 --------------QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
P + + + GD C + + W
Sbjct: 143 HGQGPLAHMPNASCGVPTLKVQVPNAS-VDVGDDVLLRCQVE--GRGLEQAGWILTELEQ 199
Query: 453 FHKN-RVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF----IFIPPFPIFIFHQIRLP 507
+ + G + ++ + C A N+ + + F
Sbjct: 200 SATVMKSGGLPSLGLTLANVT--SDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHT 257
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY-------DFG 560
+ + ++ P + W FNG S + T +
Sbjct: 258 AVEMHH--------WCIPFSVD--GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVR 307
Query: 561 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
L ++ ++G Y A N +G A
Sbjct: 308 HGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAA 342
Score = 75.2 bits (184), Expect = 4e-14
Identities = 30/237 (12%), Positives = 50/237 (21%), Gaps = 61/237 (25%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA-GSRIKTINDFGFVI 975
P + ++ C+ W SA + + G +
Sbjct: 159 PTLKVQVPNASVDVGDDVLLRCQ--VEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTL 216
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
N + TC A N G A S ++ V
Sbjct: 217 --ANVTSDLNRKNVTCWAENDVGRAEVSVQVNVS-------------------------- 248
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
E ++ P + W FNG
Sbjct: 249 ---------------------FPASVQLHTAVEMHHWCIPFSVD--GQPAPSLRWLFNGS 285
Query: 1096 PFATGSRVKTVY-------DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
S + T + L ++ ++G Y A N +G A
Sbjct: 286 VLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAA 342
Score = 65.9 bits (160), Expect = 3e-11
Identities = 25/204 (12%), Positives = 47/204 (23%), Gaps = 38/204 (18%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + + ++V C+VE G + W
Sbjct: 159 PTLKVQVPNASVDVGDDVLLRCQVE---------G----------RGLEQAGWILTELEQ 199
Query: 169 FHKN-RVKMVSDFGFVVMDIAYVQSHDSGEYVC---------QWFVNNKPLPAGAKFKTT 218
+ + G + ++ + C + V + T
Sbjct: 200 SATVMKSGGLPSLGLTLANVT--SDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHT 257
Query: 219 HDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYV-------ALDIVGAY 271
+ + P W N L + T L +
Sbjct: 258 AVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPT 317
Query: 272 AEDSGIYTVKATNSKGSATTSGTL 295
++G YT+ A N G A+ S
Sbjct: 318 HVNNGNYTLLAANPFGQASASIMA 341
Score = 64.0 bits (155), Expect = 2e-10
Identities = 22/100 (22%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKT-------IN 969
F + T E + PS+ W NG L+ S I T
Sbjct: 247 VSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLR--WLFNGSVLNETSFIFTEFLEPAANE 304
Query: 970 DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
L +N ++G YT A N G+A+ S
Sbjct: 305 TVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFM 344
Score = 63.2 bits (153), Expect = 3e-10
Identities = 28/168 (16%), Positives = 46/168 (27%), Gaps = 26/168 (15%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIV-GAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
W + A + + L + + T A N G A S +
Sbjct: 192 WILTELEQSA--TVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVN--- 246
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEI-AHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
F Q + + F G ++ +L+NG + + I
Sbjct: 247 --------VSFPASVQLHTAVEMHHWCIPFSVD----GQPAPSLRWLFNGSVLNETSFIF 294
Query: 359 TVHAFGMV-------VLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
T L + + G YT A N +GQA S+
Sbjct: 295 TEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAA 342
Score = 62.4 bits (151), Expect = 5e-10
Identities = 28/208 (13%), Positives = 47/208 (22%), Gaps = 59/208 (28%)
Query: 603 VEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
W + + G+ + ++ + N C A N G +
Sbjct: 190 AGWILTELEQSATVMKSGGLPSLGLTLANVTS--DLNRKNVTCWAENDVGRAEVSVQVN- 246
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
VS + TA H F+V
Sbjct: 247 VS--------------------------FPASVQLHTAVEMHHWCIPFSV---------- 270
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-------LEISPVYP 774
P + W +NG + S T L ++
Sbjct: 271 ------------DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTH 318
Query: 775 EDCGQYSCRAYNDYGEAVTSASMKVQGK 802
+ G Y+ A N +G+A S
Sbjct: 319 VNNGNYTLLAANPFGQASASIMAAFMDN 346
Score = 59.4 bits (143), Expect = 5e-09
Identities = 20/205 (9%), Positives = 41/205 (20%), Gaps = 67/205 (32%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+ W + S + ++S L N + TC A N +G A
Sbjct: 183 EGRGLEQAGWILTELEQS-ATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEV 241
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
+ + F + + E
Sbjct: 242 SVQVN----------------------------------------VSFPASVQLHTAVEM 261
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRV-------KM 176
+ V+ P + W NG + + +
Sbjct: 262 HHWCIPFSVD-------------------GQPAPSLRWLFNGSVLNETSFIFTEFLEPAA 302
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + ++G Y
Sbjct: 303 NETVRHGCLRLNQPTHVNNGNYTLL 327
Score = 56.3 bits (135), Expect = 4e-08
Identities = 29/195 (14%), Positives = 52/195 (26%), Gaps = 47/195 (24%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWN-GKPMKTGSRFRTFCDFG 763
P V + N + G++ + + W + T + G
Sbjct: 157 GVPTLKVQVPNAS-VDVGDDVLLRCQ--VEGRGLEQAGWILTELEQSATVMKSGGLPSLG 213
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILE--------------- 808
+ ++ + +C A ND G A S + V S+ L
Sbjct: 214 LTLANVTS--DLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQLHTAVEMHHWCIPFSVD 271
Query: 809 -------------SQLPKGMEVFISFHE-------------ISPVYPEDCGQYSCRAYND 842
S L + +F F E ++ + G Y+ A N
Sbjct: 272 GQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANP 331
Query: 843 YGEAVTSASMKVQGK 857
+G+A S
Sbjct: 332 FGQASASIMAAFMDN 346
Score = 55.9 bits (134), Expect = 5e-08
Identities = 23/186 (12%), Positives = 38/186 (20%), Gaps = 62/186 (33%)
Query: 1343 IDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAI 1402
+ ++ C A ND G A ++Q+ P +
Sbjct: 217 ANVTSDLNRKNVTCWAENDVGRAEV----------SVQVNVSFPASV------------- 253
Query: 1403 KKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWF 1462
VEM + G P + W
Sbjct: 254 ------------------------------QLHTAVEMHHWCIPFSV--DGQPAPSLRWL 281
Query: 1463 LNGKPLPHKNRFNPIYDFGYVAMNFGW-------VYPEDSGEYLCRATNLYGMDETRAIL 1515
NG L + + ++G Y A N +G +
Sbjct: 282 FNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 341
Query: 1516 KTTGKP 1521
P
Sbjct: 342 AFMDNP 347
Score = 53.6 bits (128), Expect = 3e-07
Identities = 17/75 (22%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKATN 56
P + W NG L+ S I + F L +N ++ YT A N
Sbjct: 271 DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 330
Query: 57 LLGEAVSTCTLKIED 71
G+A ++ D
Sbjct: 331 PFGQASASIMAAFMD 345
Score = 49.7 bits (118), Expect = 6e-06
Identities = 23/178 (12%), Positives = 38/178 (21%), Gaps = 52/178 (29%)
Query: 1430 QIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN-RFNPIYDFGYVAMNF 1487
+++ + V++ CQ G + W L + + G N
Sbjct: 162 KVQVPNASVDVGDDVLLRCQ--VEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANV 219
Query: 1488 GWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQ 1547
+ C A N G E +
Sbjct: 220 --TSDLNRKNVTCWAENDVGRAEVSVQVN------------------------------- 246
Query: 1548 HTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
F + + E V G P P + WL NG +
Sbjct: 247 ---------------VSFPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNE 289
Score = 38.6 bits (89), Expect = 0.020
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
L ++ + G Y A N G+A
Sbjct: 310 CLRLNQPTHVNNGNYTLLAANPFGQASASIMA 341
Score = 33.6 bits (76), Expect = 0.60
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
PT+ + + +V G V L+C++ G+
Sbjct: 157 GVPTLKVQVPNASVDVGDDVLLRCQVEGRGL 187
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW-
type/skeletal muscle SLOW-isoform, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Length = 103
Score = 85.5 bits (212), Expect = 7e-20
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKII--PDIRYKTLE 1793
G G + G+ + ++S +V W KNG++II P RY+
Sbjct: 1 GSSGSSGIMVTKQLEDTTAYCGERVELECEVSEDDA-NVKWFKNGEEIIPGPKSRYRIRV 59
Query: 1794 EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
E L+I A D+ Y + + A+L V K P
Sbjct: 60 EGKKHILIIEGATKADAAEYSVM----TTGGQSSAKLSVDLKSGP 100
Score = 84.3 bits (209), Expect = 2e-19
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 9/100 (9%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAG--SRIKTINDFGF 973
D T EC ++ + V+WF NG+ + G SR + +
Sbjct: 7 GIMVTKQLEDTTAYCGERVELECEVS---EDDANVKWFKNGEEIIPGPKSRYRIRVEGKK 63
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQG 1013
IL I D+ Y+ T +S KL+V + G
Sbjct: 64 HILIIEGATKADAAEYSVMTTG----GQSSAKLSVDLKSG 99
Score = 82.8 bits (205), Expect = 7e-19
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 7/98 (7%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS--TK 1694
+ + TK+++ A+ ++ E E D +KWF+ I P + K
Sbjct: 5 SSGIMVTKQLEDTTAYCGERVELECEVSEDD-ANVKWFKNGEEIIPGPKSRYRIRVEGKK 63
Query: 1695 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
ILI+ D+ ++V+ + SA L V+ K
Sbjct: 64 HILIIEGATKADAAEYSVMTTG----GQSSAKLSVDLK 97
Score = 70.4 bits (173), Expect = 1e-14
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 10/99 (10%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG--SRFRTFCDFG 763
+ T L + GE E ++ + V+WF NG+ + G SR+R +
Sbjct: 7 GIMVTKQLEDTT-AYCGERVELECEVS---EDDANVKWFKNGEEIIPGPKSRYRIRVEGK 62
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
IL I D +YS +SA + V K
Sbjct: 63 KHILIIEGATKADAAEYSVMT----TGGQSSAKLSVDLK 97
Score = 70.0 bits (172), Expect = 2e-14
Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 404 SKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH--KNRVKMV 461
S T ++ G+ EC V++ + V+WF NG+ I K+R ++
Sbjct: 3 SGSSGIMVTKQLEDTT-AYCGERVELECE---VSEDDANVKWFKNGEEIIPGPKSRYRIR 58
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ ++ I D+ EY
Sbjct: 59 VEGKKHILIIEGATKADAAEYSVMTTG 85
Score = 62.7 bits (153), Expect = 6e-12
Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 23/97 (23%)
Query: 108 SPV-FISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
S + L D E V +C V++ + V+WF NG+
Sbjct: 6 SGIMVTKQLEDTTAYCGERVELECE--------------------VSEDDANVKWFKNGE 45
Query: 167 PIFH--KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
I K+R ++ + ++ I D+ EY
Sbjct: 46 EIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM 82
Score = 62.0 bits (151), Expect = 1e-11
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 10/99 (10%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG--SRVKTVYDFG 1110
+ T QL+D +V +C + S+ + WF NG G SR + +
Sbjct: 7 GIMVTKQLED-TTAYCGERVELECEV---SEDDANVKWFKNGEEIIPGPKSRYRIRVEGK 62
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
L ++ D+ EY T + AK+ K
Sbjct: 63 KHILIIEGATKADAAEYSVMTTG----GQSSAKLSVDLK 97
Score = 60.8 bits (148), Expect = 3e-11
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Query: 5 ADPNLKIEWFKNGVPLSLG--SRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
++ + ++WFKNG + G SR R + L I D+A Y+ T
Sbjct: 32 SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQ 87
Query: 63 STCTLKIEDR 72
S+ L ++ +
Sbjct: 88 SSAKLSVDLK 97
Score = 58.5 bits (142), Expect = 2e-10
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 10/97 (10%)
Query: 1421 KKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPH--KNRFNPIY 1478
Q++ + + EC+ V + + V+WF NG+ + K+R+
Sbjct: 4 GSSGIMVTKQLEDT-TAYCGERVELECE---VSEDDANVKWFKNGEEIIPGPKSRYRIRV 59
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ + D+ EY T ++ A L
Sbjct: 60 EGKKHILIIEGATKADAAEYSVMTTG----GQSSAKL 92
Score = 54.6 bits (132), Expect = 4e-09
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPI--EASHRIRTVHAFGMVVLEI 370
+ L + + GE E V + V++ NG+ I R R +L I
Sbjct: 12 KQLEDTTAYCGERVELECE---VSEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILII 68
Query: 371 LGTKIEDTGVYTCRATNKWGQAEISVNL 398
G D Y+ T A++SV+L
Sbjct: 69 EGATKADAAEYSVMTTGGQSSAKLSVDL 96
Score = 53.1 bits (128), Expect = 2e-08
Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG--SRVKTVYDFGFISLDMDYVY 570
+ +V +C + S+ + WF NG G SR + + L ++
Sbjct: 16 DTTAYCGERVELECEV---SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGAT 72
Query: 571 ARDSGEYICRATNKWGTA 588
D+ EY T +A
Sbjct: 73 KADAAEYSVMTTGGQSSA 90
Score = 47.3 bits (113), Expect = 2e-06
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 241 WFVNNKPLPAGA--KFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
WF N + + G +++ + L I GA D+ Y+V T + SA
Sbjct: 40 WFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTGGQSSAK 91
Score = 44.6 bits (106), Expect = 2e-05
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 603 VEWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
V+WF NG+++ G RYR + IL I + ++ Y T + A L
Sbjct: 38 VKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG----GQSSAKL 92
Score = 43.1 bits (102), Expect = 6e-05
Identities = 10/54 (18%), Positives = 15/54 (27%), Gaps = 2/54 (3%)
Query: 1560 KEAPV-FVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
+ + Q E GE V+ V W NG I+ +
Sbjct: 4 GSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYR 56
Score = 41.9 bits (99), Expect = 1e-04
Identities = 15/118 (12%), Positives = 21/118 (17%), Gaps = 46/118 (38%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRV---EPRV-----------DPRLRVECSLSTAFF 1307
++E T E V E V + V P+ R
Sbjct: 5 SSGIMVTKQLEDTTAYCGERVELECEVSEDDANVKWFKNGEEIIPGPKSRYRIR------ 58
Query: 1308 FPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ L I+ D EY A
Sbjct: 59 --------------------------VEGKKHILIIEGATKADAAEYSVMTTGGQSSA 90
Score = 37.7 bits (88), Expect = 0.004
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
V + L+D G V L+C ++
Sbjct: 7 GIMVTKQLEDTTAYCGERVELECEVSEDD 35
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin
domain, fibronectin type III repeat, CE adhesion; 1.80A
{Homo sapiens}
Length = 215
Score = 88.3 bits (219), Expect = 1e-19
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 5/100 (5%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--SAGSRIKTINDFGF 973
AP+ P + E + C PS T+ WF +G+ L S S IK N
Sbjct: 19 APKL-QGPVAVYTWEGNQVNITCE--VFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSA 75
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQG 1013
LE+ D G Y C A N+ G+ + L
Sbjct: 76 SYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPS 115
Score = 76.8 bits (189), Expect = 1e-15
Identities = 23/96 (23%), Positives = 34/96 (35%), Gaps = 3/96 (3%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD--FQIHTFSTKSI 1696
P +E +Q E P TI WFR+ + SS +I+ + S
Sbjct: 19 APKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASY 77
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L + D G + A NR G+ LV +
Sbjct: 78 LEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Score = 76.0 bits (187), Expect = 2e-15
Identities = 18/122 (14%), Positives = 36/122 (29%), Gaps = 8/122 (6%)
Query: 1719 GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK 1778
+++ +V + P + G ++ A + W +
Sbjct: 1 ATYAAASSALVPRGSH-----MYAPKLQGP-VAVYTWEGNQVNITCEVFAYPSATISWFR 54
Query: 1779 NGKKIIPD--IRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
+G+ + K + L + D G Y C A+N G+ E LV
Sbjct: 55 DGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTP 114
Query: 1837 AP 1838
+
Sbjct: 115 SS 116
Score = 75.6 bits (186), Expect = 4e-15
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 6/107 (5%)
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG--SR 755
H AP P++ EG + + P + WF +G+ + + S
Sbjct: 11 VPRGSHMYAPKLQGPVAVY--TWEGNQVNITCEVFA--YPSATISWFRDGQLLPSSNYSN 66
Query: 756 FRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
+ + LE++P D G Y+C A N G+ +
Sbjct: 67 IKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Score = 69.1 bits (169), Expect = 5e-13
Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 2/74 (2%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLG--SRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLL 58
E A P+ I WF++G L S I+ L + +D Y C A N +
Sbjct: 40 CEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRI 99
Query: 59 GEAVSTCTLKIEDR 72
G+ L D
Sbjct: 100 GQESLEFILVQADT 113
Score = 63.7 bits (155), Expect = 4e-11
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 6/115 (5%)
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKP 350
T V +++ + Q + EG + + T+ + +G+
Sbjct: 1 ATYAAASSALVPRGSHMYAPKLQGPVAVYTWEGNQVNITCE--VFAYPSATISWFRDGQL 58
Query: 351 IEAS--HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
+ +S I+ + LE+ D G Y C A N+ GQ + L D
Sbjct: 59 LPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Score = 63.7 bits (155), Expect = 4e-11
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 21/116 (18%)
Query: 379 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFT--SHIKSLEGLKDGDSAHFECTLTPV 436
Y ++ + S PK + + EG + + C +
Sbjct: 1 ATYAAASSALVPR-----------GSHMYAPKLQGPVAVYTWEG----NQVNITCEVFA- 44
Query: 437 NDPELKVEWFHNGKPIFHKN--RVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
P + WF +G+ + N +K+ + +++ +D G Y C A N
Sbjct: 45 -YPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRI 99
Score = 63.3 bits (154), Expect = 5e-11
Identities = 24/107 (22%), Positives = 33/107 (30%), Gaps = 6/107 (5%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN-P 1476
P+ Q E C+ P+ + WF +G+ LP N N
Sbjct: 13 RGSHMYAPKL--QGPVAVYTWEGNQVNITCE--VFAYPSATISWFRDGQLLPSSNYSNIK 68
Query: 1477 IYDFGYVAM-NFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
IY+ + D G Y C A N G + IL P
Sbjct: 69 IYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPS 115
Score = 59.8 bits (145), Expect = 7e-10
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 1042 DELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG- 1100
L+P P Q + E +V+ C E + P+ I WF +G+ +
Sbjct: 8 SALVPRGSHMYAPKL--QGPVAVYTWEGNQVNITC--EVFAYPSATISWFRDGQLLPSSN 63
Query: 1101 -SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
S +K L++ D G Y C A N+ G + ++
Sbjct: 64 YSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILV 109
Score = 57.5 bits (139), Expect = 5e-09
Identities = 22/122 (18%), Positives = 40/122 (32%), Gaps = 19/122 (15%)
Query: 480 GEYVCRAWN----NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPT 535
Y + P ++ P + E +V+ C E + P+
Sbjct: 1 ATYAAASSALVPRGSHMYAPK-------LQGPV----AVYTWEGNQVNITC--EVFAYPS 47
Query: 536 MRIDWFFNGRPFATG--SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAK 593
I WF +G+ + S +K L++ D G Y C A N+ G +
Sbjct: 48 ATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFI 107
Query: 594 VI 595
++
Sbjct: 108 LV 109
Score = 53.7 bits (129), Expect = 9e-08
Identities = 16/102 (15%), Positives = 29/102 (28%), Gaps = 21/102 (20%)
Query: 102 PELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEW 161
P + V E V+ C V P + W
Sbjct: 12 PRGSHMYAPKLQGPVAVYTWEGNQVNITCEVFA-------------------YPSATISW 52
Query: 162 FHNGKPIFHKN--RVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
F +G+ + N +K+ + +++ +D G Y C
Sbjct: 53 FRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94
Score = 53.7 bits (129), Expect = 1e-07
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 603 VEWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ WF +G+ LP + ++ L++ E + G Y C A N+ G + + L
Sbjct: 50 ISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILV 109
Score = 49.8 bits (119), Expect = 2e-06
Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 240 EWFVNNKPLPAG--AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
WF + + LP+ + K + L++ D G Y A N G + L
Sbjct: 51 SWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQ 110
Query: 298 LER 300
+
Sbjct: 111 ADT 113
Score = 46.4 bits (110), Expect = 3e-05
Identities = 16/73 (21%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 1544 ASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
A++ LV AP P A EG V YP + W +G +
Sbjct: 1 ATYAAASSALVPRGSHMYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLL 59
Query: 1604 VNEIVRKITATET 1616
+ I T
Sbjct: 60 PSSNYSNIKIYNT 72
Score = 43.7 bits (103), Expect = 2e-04
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
E++P D G Y+C A N G+ +
Sbjct: 79 EVTPDSENDFGNYNCTAVNRIGQESLEFILVQADT 113
Score = 36.3 bits (84), Expect = 0.059
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
L++ D G Y C A N G+ + +
Sbjct: 77 YLEVTPDSENDFGNYNCTAVNRIGQESLEFILV 109
Score = 35.2 bits (81), Expect = 0.14
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 1842 APAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ A + AP + P EG+ V + C + P
Sbjct: 7 SSALVPRGSHMYAPKLQGP-VAVYTWEGNQVNITCEVFAYP 46
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell
adhesion molecule, immunoglobuline superfamily,
alternative splicing, cell adhesion; 2.19A {Mus musculus}
PDB: 3mj7_B* 2npl_X
Length = 214
Score = 87.8 bits (217), Expect = 2e-19
Identities = 33/217 (15%), Positives = 53/217 (24%), Gaps = 41/217 (18%)
Query: 1647 QPCRAFEQDQARFEVEFDGDPLPT----IKWFREDFPITSSPDFQIHTF----------- 1691
Q + + A +F P I+W I
Sbjct: 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPD 67
Query: 1692 -------------STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRG 1738
S + + + + + D G + + G A L V
Sbjct: 68 LKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTV--------- 118
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKNGKKIIPDIRYKTLEEDNL 1797
+V PS +G + + + PL W K +
Sbjct: 119 -LVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSP- 176
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
+ + A E SG Y C N G +C L V
Sbjct: 177 -VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212
Score = 72.8 bits (178), Expect = 3e-14
Identities = 23/134 (17%), Positives = 34/134 (25%), Gaps = 9/134 (6%)
Query: 355 HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
H G + + ++ D G Y C+ G A L V P T
Sbjct: 73 HFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLT-VLV----KPSGTRC 127
Query: 415 IKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYV 474
+ G+ +C L+ EW + +
Sbjct: 128 FVDGS-EEIGNDFKLKCE-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVIS--VKNA 183
Query: 475 QSHDSGEYVCRAWN 488
S SG Y C N
Sbjct: 184 SSEYSGTYSCTVQN 197
Score = 70.9 bits (173), Expect = 1e-13
Identities = 32/248 (12%), Positives = 55/248 (22%), Gaps = 72/248 (29%)
Query: 923 PTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAG------------------ 962
+ A+ A+ C+ T P + + +EW +
Sbjct: 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYP 66
Query: 963 ------SRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDV 1016
G + + ++ L D G Y CK G A LTV
Sbjct: 67 DLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV------ 120
Query: 1017 EPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDC 1076
P T D C
Sbjct: 121 ------------------------------------KPSGTRCFVD-GSEEIGNDFKLKC 143
Query: 1077 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 1136
+ ++ +W + IS+ + SG Y C N+ G
Sbjct: 144 E-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKN--ASSEYSGTYSCTVQNRVG 200
Query: 1137 TAMTKAKV 1144
+ ++
Sbjct: 201 SDQCMLRL 208
Score = 69.7 bits (170), Expect = 4e-13
Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 43/204 (21%)
Query: 424 GDSAHFEC--TLTPVNDPELKVEWFHNGKPIFH---------------------KNRVKM 460
G++A+ C TL+P + L +EW + K RV
Sbjct: 15 GETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHF 74
Query: 461 VSDF---GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRL-----PSPSQD 512
S+ G +++ +Q D G Y C+ P + L PS ++
Sbjct: 75 TSNDVKSGDASINVTNLQLSDIGTYQCKVKKA-------PGVANKKFLLTVLVKPSGTRC 127
Query: 513 NLD--VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
+D C + ++ +W + IS+
Sbjct: 128 FVDGSEEIGNDFKLKCE-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKN--AS 184
Query: 571 ARDSGEYICRATNKWGTAMTKAKV 594
+ SG Y C N+ G+ ++
Sbjct: 185 SEYSGTYSCTVQNRVGSDQCMLRL 208
Score = 64.7 bits (157), Expect = 2e-11
Identities = 13/93 (13%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P D + +C + EW + + + +
Sbjct: 121 KPSGTRCFVDGSEEIGNDFKLKCE-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSP--V 177
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + + SG Y+C N+ G +L V
Sbjct: 178 ISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDV 210
Score = 64.3 bits (156), Expect = 2e-11
Identities = 31/210 (14%), Positives = 50/210 (23%), Gaps = 64/210 (30%)
Query: 710 TVPLSNIDDLREGENAHFE--ARLTPTDDPKLKVEWFWNGKPMKTG-------------- 753
T P I+ +GE A+ L+P D L +EW + +
Sbjct: 4 TTPEQRIE-KAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYD 62
Query: 754 ----------SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR 803
G + ++ + D G Y C+ G A + V K
Sbjct: 63 NYYPDLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKP 122
Query: 804 SII---LESQLPKGMEV--------------------------FISFHE--------ISP 826
S ++ G + + +
Sbjct: 123 SGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVISVKN 182
Query: 827 VYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
E G YSC N G + V
Sbjct: 183 ASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212
Score = 64.3 bits (156), Expect = 2e-11
Identities = 30/294 (10%), Positives = 60/294 (20%), Gaps = 89/294 (30%)
Query: 510 SQDNLDVPEAGKVHFDCRL--EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
+ ++ + + C+ P+ + I+W + +V +Y
Sbjct: 6 PEQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGD------- 58
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIV 627
+Y + R H G
Sbjct: 59 KIYDNYYPDLKGRV----------------------------------HFTSNDVKSGDA 84
Query: 628 ILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTL 687
+++ + G Y+C+ G K L
Sbjct: 85 SINVTNLQLSDIGTYQCKVKKAPGVANKKFLLT--------------------------- 117
Query: 688 EDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNG 747
P T + G + + L+ EW
Sbjct: 118 ---------------VLVKPSGTRCFVDGS-EEIGNDFKLKCE-PKEGSLPLQFEWQKLS 160
Query: 748 KPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
+ + ++ + E G YSC N G + V
Sbjct: 161 DSQTMPTPWLAEMTSP--VISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVVP 212
Score = 60.1 bits (145), Expect = 6e-10
Identities = 21/146 (14%), Positives = 41/146 (28%), Gaps = 11/146 (7%)
Query: 254 FKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQ 313
G ++++ D G Y K + G A L L + P + +
Sbjct: 75 TSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK-------PSGT-R 126
Query: 314 FQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGT 373
+ G + G + E+ V+ +
Sbjct: 127 CFVDGSEEIGNDFKLKCE-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSP--VISVKNA 183
Query: 374 KIEDTGVYTCRATNKWGQAEISVNLE 399
E +G Y+C N+ G + + L+
Sbjct: 184 SSEYSGTYSCTVQNRVGSDQCMLRLD 209
Score = 59.3 bits (143), Expect = 1e-09
Identities = 26/224 (11%), Positives = 43/224 (19%), Gaps = 80/224 (35%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFD------------------------FGLVTL 37
P L IEW + + ++ + G ++
Sbjct: 27 SPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86
Query: 38 SINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEV 97
++ +L+ D Y CK G A L
Sbjct: 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLT----------------------------- 117
Query: 98 RKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPEL 157
V P D + + C + L
Sbjct: 118 -------VLVKPSGTRCFVDGSEEIGNDFKLKCEPKEG------------------SLPL 152
Query: 158 KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ EW + + S SG Y C
Sbjct: 153 QFEWQKLSDSQTMPTPWLAEMTSPVIS--VKNASSEYSGTYSCT 194
Score = 57.8 bits (139), Expect = 4e-09
Identities = 28/190 (14%), Positives = 43/190 (22%), Gaps = 52/190 (27%)
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVP 1386
V F+ G S+++ + D G Y C+ G A L V
Sbjct: 72 VHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANK----------KFLLTVLVK 121
Query: 1387 KGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFE 1446
P T+ K +
Sbjct: 122 --------------------------------------PSG-TRCFVDGSEEIGNDFKLK 142
Query: 1447 CQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLY 1506
C+ G ++ EW + + + E SG Y C N
Sbjct: 143 CE-PKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPVI--SVKNASSEYSGTYSCTVQNRV 199
Query: 1507 GMDETRAILK 1516
G D+ L
Sbjct: 200 GSDQCMLRLD 209
Score = 55.8 bits (134), Expect = 2e-08
Identities = 19/204 (9%), Positives = 39/204 (19%), Gaps = 69/204 (33%)
Query: 1441 QSTKFECQLA--PVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVY------- 1491
++ C+ P + +EW ++ ++ +Y + N+
Sbjct: 16 ETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFT 75
Query: 1492 -----------------PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMK 1534
D G Y C+ G+ + +L
Sbjct: 76 SNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLT------------------ 117
Query: 1535 SIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR 1593
V P + G + C G +
Sbjct: 118 -------------------V-----LVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQ 153
Query: 1594 VMWLINGHTIVNEIVRKITATETT 1617
W + T
Sbjct: 154 FEWQKLSDSQTMPTPWLAEMTSPV 177
Score = 54.3 bits (130), Expect = 6e-08
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
L+ EW K ++ + + +S+ + ++ S Y+C N +G
Sbjct: 149 SLPLQFEWQKLSDSQTMPTPWLAEMTSP--VISVKNASSEYSGTYSCTVQNRVGSDQCML 206
Query: 66 TLKI 69
L +
Sbjct: 207 RLDV 210
Score = 51.6 bits (123), Expect = 4e-07
Identities = 15/87 (17%), Positives = 25/87 (28%), Gaps = 20/87 (22%)
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTV 1857
++ + + D G Y+C G A + L V P+
Sbjct: 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVL-------------------VKPSG 124
Query: 1858 AEPLKDQNVKEGSAVTLKCRIT-GKPR 1883
D + + G+ LKC G
Sbjct: 125 TRCFVDGSEEIGNDFKLKCEPKEGSLP 151
Score = 51.6 bits (123), Expect = 5e-07
Identities = 35/204 (17%), Positives = 62/204 (30%), Gaps = 29/204 (14%)
Query: 118 VECKENENVHFDCRV--EPSKDATMKIGKLLCTLTPVNDPELKVEWF----HNGKPIFHK 171
+E + E + C+ P + I L+ ++ + + ++ K
Sbjct: 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLK 69
Query: 172 NRVKMVSDF---GFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAK----------FKTT 218
RV S+ G +++ +Q D G Y C+ V P A K
Sbjct: 70 GRVHFTSNDVKSGDASINVTNLQLSDIGTYQCK--VKKAPGVANKKFLLTVLVKPSGTRC 127
Query: 219 HDFGYVALDIELMLK------TLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYA 272
G + + LK +L EW + + + + A +
Sbjct: 128 FVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWLAEMTSPV--ISVKNASS 185
Query: 273 EDSGIYTVKATNSKGSATTSGTLK 296
E SG Y+ N GS L
Sbjct: 186 EYSGTYSCTVQNRVGSDQCMLRLD 209
Score = 41.6 bits (97), Expect = 0.001
Identities = 15/111 (13%), Positives = 33/111 (29%), Gaps = 26/111 (23%)
Query: 1061 QDNLDVPEAGKVHFDCRL--EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI------ 1112
+ ++ + + C+ P+ + I+W + +V +Y I
Sbjct: 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYP 66
Query: 1113 ------------------SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
S+++ + D G Y C+ G A K +
Sbjct: 67 DLKGRVHFTSNDVKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLT 117
Score = 31.2 bits (70), Expect = 2.2
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 1856 TVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
++ P + +G L C+ T P
Sbjct: 2 SITTPEQRIEKAKGETAYLPCKFTLSPE 29
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 184
Score = 86.2 bits (213), Expect = 4e-19
Identities = 28/190 (14%), Positives = 50/190 (26%), Gaps = 30/190 (15%)
Query: 1655 DQARFEVEFDGDPLPTI--KWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 1712
+ + +W + + + + G ++
Sbjct: 14 SKILLTCSLNDSATEVTGHRWLKGGVVLKEDAL-------PGQKTEFKVDSDDQWGEYSC 66
Query: 1713 IAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP 1771
+ +AN+ + PP SS IN G+ A K +
Sbjct: 67 VFLPEPMG---TANIQLH----------GPPRVKAVKSSEHINEGETAMLVCKSESVPPV 113
Query: 1772 LDVYWLKNGKKIIPDI------RYKTLEEDNLFTLLIIEAVVE-DSGAYECVAMNNAGEA 1824
D W K + R+ L I +E D G Y C ++ G
Sbjct: 114 TDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSD 173
Query: 1825 RCEAELVVQS 1834
+ L V+S
Sbjct: 174 QAIITLRVRS 183
Score = 76.2 bits (187), Expect = 1e-15
Identities = 28/187 (14%), Positives = 47/187 (25%), Gaps = 36/187 (19%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G C+L W G + + GEY
Sbjct: 13 GSKILLTCSLNDSATEVTGHRWLKGGVVLKE-------DALPGQKTEFKVDSDDQWGEYS 65
Query: 484 CRAWNN-------FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE--PKSDP 534
C + PP +++ S+ + E C+ E P P
Sbjct: 66 CVFLPEPMGTANIQLHGPP-------RVKAVKSSE---HINEGETAMLVCKSESVP---P 112
Query: 535 TMRIDWFFNGR------PFATGSRVKTVYDFGFISLDMDYV-YARDSGEYICRATNKWGT 587
W+ + SR G L ++ + D G+Y C T+ G+
Sbjct: 113 VTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGS 172
Query: 588 AMTKAKV 594
+
Sbjct: 173 DQAIITL 179
Score = 68.1 bits (166), Expect = 7e-13
Identities = 29/220 (13%), Positives = 48/220 (21%), Gaps = 65/220 (29%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKA 993
C L + W G L + E G Y+C
Sbjct: 16 ILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQK-------TEFKVDSDDQWGEYSCVF 68
Query: 994 TNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNP 1053
E + + + G P
Sbjct: 69 LP---EPMGTANIQLHG------------------------------------------P 83
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLE--PKSDPTMRIDWFFNGR------PFATGSRVKT 1105
P + + + E C+ E P P W+ + SR
Sbjct: 84 PRVKAVKS-SEHINEGETAMLVCKSESVP---PVTDWAWYKITDSEDKALMNGSESRFFV 139
Query: 1106 VYDFGFISLDMDYV-YARDSGEYICRATNKWGTAMTKAKV 1144
G L ++ + D G+Y C T+ G+ +
Sbjct: 140 SSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITL 179
Score = 67.4 bits (164), Expect = 1e-12
Identities = 20/137 (14%), Positives = 36/137 (26%), Gaps = 31/137 (22%)
Query: 1748 TISSAVINVGQLARFDAKISATKP--LDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEA 1805
T+ + V ++G ++ + WLK G + D
Sbjct: 4 TVFTTVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKED-------ALPGQKTEFKVD 56
Query: 1806 VVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQN 1865
+ G Y CV + A + + P V ++
Sbjct: 57 SDDQWGEYSCVFLPEPM---GTANIQLHGP-------------------PRVKAVKSSEH 94
Query: 1866 VKEGSAVTLKCRITGKP 1882
+ EG L C+ P
Sbjct: 95 INEGETAMLVCKSESVP 111
Score = 65.0 bits (158), Expect = 7e-12
Identities = 23/181 (12%), Positives = 44/181 (24%), Gaps = 56/181 (30%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
G L + W G +K + E + G+Y
Sbjct: 12 LGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQK-------TEFKVDSDDQWGEY 64
Query: 781 SCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGME----------------VFISFH-- 822
SC E + +A++++ G + E +++
Sbjct: 65 SCVFLP---EPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKI 121
Query: 823 ---------------------------EISPVYPE-DCGQYSCRAYNDYGEAVTSASMKV 854
I + E D GQY C + G +++V
Sbjct: 122 TDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181
Query: 855 Q 855
+
Sbjct: 182 R 182
Score = 64.3 bits (156), Expect = 1e-11
Identities = 29/178 (16%), Positives = 42/178 (23%), Gaps = 40/178 (22%)
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSG 575
K+ C L + W G + +F S D G
Sbjct: 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDD-------QWG 62
Query: 576 EYICRATNKWGTAMT----------------------KAKVICKV----LTVIVEWFYNG 609
EY C + A ++CK W+
Sbjct: 63 EYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKIT 122
Query: 610 KKLP------HGHRYRTFHDFGIVILDILYC-YEENSGVYECRATNKYGSDVTKASLK 660
R+ G L I E + G Y C T+ GSD +L+
Sbjct: 123 DSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 180
Score = 61.6 bits (149), Expect = 1e-10
Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL------SAGSRIKTIND 970
P + + E A C+ + P W+ + + SR +
Sbjct: 84 PRVKAVKSSEHINEGETAMLVCKSE-SVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS 142
Query: 971 FGFVILEINDVYLR-DSGLYTCKATNKHGEATTSCKLTVK 1009
G L I ++ + D G Y C T+ G L V+
Sbjct: 143 QGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRVR 182
Score = 58.5 bits (141), Expect = 2e-09
Identities = 35/210 (16%), Positives = 54/210 (25%), Gaps = 65/210 (30%)
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
W G L +F + ++ G Y C +
Sbjct: 29 VTGHRWLKGGVVLKEDALPGQKTEFKVD-------SDDQWGEYSCVFLPEPMG------- 74
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
TA+I+ P S+ +
Sbjct: 75 --------------------------------------TANIQLHGPPRVKAVKSSEH-I 95
Query: 720 REGENAHF--EARLTPTDDPKLKVEWF----WNGKPMKTGS--RFRTFCDFGFVILEISP 771
EGE A ++ P P W+ K + GS RF G L I
Sbjct: 96 NEGETAMLVCKSESVP---PVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIEN 152
Query: 772 VYPE-DCGQYSCRAYNDYGEAVTSASMKVQ 800
+ E D GQY C + G +++V+
Sbjct: 153 LNMEADPGQYRCNGTSSKGSDQAIITLRVR 182
Score = 56.6 bits (136), Expect = 6e-09
Identities = 26/208 (12%), Positives = 41/208 (19%), Gaps = 71/208 (34%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ A W K GV L + D Y+C E
Sbjct: 22 LNDSATEVTGHRWLKGGVVLKEDALPGQK-------TEFKVDSDDQWGEYSCVFLP---E 71
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
+ T ++ + P + +
Sbjct: 72 PMGTANIQ------------------------------------LHGPPRVKAVKSSEHI 95
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKN------RV 174
E E C+ E P W+ R
Sbjct: 96 NEGETAMLVCKSE---------S---------VPPVTDWAWYKITDSEDKALMNGSESRF 137
Query: 175 KMVSDFGFVVMDIAYVQ-SHDSGEYVCQ 201
+ S G + I + D G+Y C
Sbjct: 138 FVSSSQGRSELHIENLNMEADPGQYRCN 165
Score = 55.0 bits (132), Expect = 2e-08
Identities = 26/173 (15%), Positives = 50/173 (28%), Gaps = 18/173 (10%)
Query: 1574 VQEGEPARF-CTRVTGYPRP--RVMWLINGHTIVNEIVRKITAT-ETTEMEHKGK----- 1624
G C + WL G + + + + + G+
Sbjct: 10 EDLGSKILLTC-SLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVF 68
Query: 1625 IQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPI--- 1680
+ E + A+ + PP E + A + + P T W++
Sbjct: 69 LPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKA 128
Query: 1681 ---TSSPDFQIHTFSTKSILIMRQVFME-DSGVFAVIAENRGGKAKCSANLVV 1729
S F + + +S L + + ME D G + + G + L V
Sbjct: 129 LMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 181
Score = 54.3 bits (130), Expect = 3e-08
Identities = 30/171 (17%), Positives = 43/171 (25%), Gaps = 27/171 (15%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFV 204
L C+L W G + + GEY C F+
Sbjct: 18 LTCSLNDSATEVTGHRWLKGGVVLKE-------DALPGQKTEFKVDSDDQWGEYSCV-FL 69
Query: 205 NNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFT------------EWF----VNNKPL 248
A + V + W+ +K L
Sbjct: 70 PEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKAL 129
Query: 249 PAGA--KFKTTHDFGYVALDIVGA-YAEDSGIYTVKATNSKGSATTSGTLK 296
G+ +F + G L I D G Y T+SKGS TL+
Sbjct: 130 MNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 180
Score = 53.9 bits (129), Expect = 5e-08
Identities = 23/165 (13%), Positives = 42/165 (25%), Gaps = 24/165 (14%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLER 300
W L A + + G Y+
Sbjct: 34 WLKGGVVLKEDALPGQK-------TEFKVDSDDQWGEYSCVFLPEPMGTAN--------- 77
Query: 301 LFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQ---TMTVEFLYNGKPIEASH 355
+ + P + +++EGE A ++ +P + +
Sbjct: 78 --IQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSES 135
Query: 356 RIRTVHAFGMVVLEILGTKIE-DTGVYTCRATNKWGQAEISVNLE 399
R + G L I +E D G Y C T+ G + + L
Sbjct: 136 RFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLR 180
Score = 51.6 bits (123), Expect = 3e-07
Identities = 19/170 (11%), Positives = 31/170 (18%), Gaps = 55/170 (32%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
C L W G L +F + + GEY C
Sbjct: 14 SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDS-------DDQWGEYSC 66
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
E +
Sbjct: 67 VFLP--------------------------------------EPMGTANIQLHG------ 82
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIV 1608
P + ++ + EGE A C + P W + ++
Sbjct: 83 -PPRVKAVKSSEHINEGETAMLVC-KSESVPPVTDWAWYKITDSEDKALM 130
Score = 46.9 bits (111), Expect = 1e-05
Identities = 24/185 (12%), Positives = 44/185 (23%), Gaps = 62/185 (33%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+ + GEY C +
Sbjct: 50 KTEFKVDSDDQWGEYSCVFLPEPMGTAN-------------------------------- 77
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDP-NMK 1458
+ PPR ++ + E ++ C+ P
Sbjct: 78 -------------------IQLHGPPRVKAVKSSEH-INEGETAMLVCKS--ESVPPVTD 115
Query: 1459 VEWF--LNGKPLPHKN----RFNPIYDFGYVAMNFGWVYPE-DSGEYLCRATNLYGMDET 1511
W+ + + N RF G ++ + E D G+Y C T+ G D+
Sbjct: 116 WAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKGSDQA 175
Query: 1512 RAILK 1516
L+
Sbjct: 176 IITLR 180
Score = 46.6 bits (110), Expect = 2e-05
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Query: 7 PNLKIEWFKNG------VPLSLGSRIRSTFDFGLVTLSINSL-RADDSAIYTCKATNLLG 59
P W+K + SR + G L I +L D Y C T+ G
Sbjct: 112 PVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKG 171
Query: 60 EAVSTCTLKI 69
+ TL++
Sbjct: 172 SDQAIITLRV 181
Score = 43.9 bits (103), Expect = 1e-04
Identities = 14/92 (15%), Positives = 21/92 (22%), Gaps = 10/92 (10%)
Query: 1066 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSG 1125
K+ C L + W G + +F S D G
Sbjct: 10 EDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDD-------QWG 62
Query: 1126 EYICRATNKWGTAMTKAKVICKAKHDIVTESQ 1157
EY C + M A + +
Sbjct: 63 EYSCVFLPE---PMGTANIQLHGPPRVKAVKS 91
Score = 41.2 bits (96), Expect = 0.001
Identities = 10/50 (20%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEG 872
E + G+YSC E + +A++++ G + EG
Sbjct: 52 EFKVDSDDQWGEYSCVFLP---EPMGTANIQLHGPPRVKAVKSSEHINEG 98
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease
MU ectodermal dysplasia, glycoprotein, heparin-binding,
immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A*
3euu_A 3dar_A 1wvz_A
Length = 100
Score = 82.9 bits (205), Expect = 5e-19
Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 7/99 (7%)
Query: 915 KAPEFLTT----PTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIND 970
+AP + T + + F C +P T+ W NGK RI
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKV 60
Query: 971 FGFV-ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
L + V D G YTC N++G + L V
Sbjct: 61 RNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 79.4 bits (196), Expect = 9e-18
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 5/96 (5%)
Query: 1742 PPSFLTTI----SSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLE-EDN 1796
P + T + +F + WLKNGK+ + R + +
Sbjct: 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQ 63
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
++L++ V D G Y CV N G L V
Sbjct: 64 HWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 76.7 bits (189), Expect = 8e-17
Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 5/98 (5%)
Query: 1637 AKPPVFTKKIQPCRAF----EQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS 1692
+ P +T + + + +F G+P+PT++W + +
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVR 61
Query: 1693 T-KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
LIM V D G + + EN G + +L V
Sbjct: 62 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 70.9 bits (174), Expect = 8e-15
Identities = 23/101 (22%), Positives = 35/101 (34%), Gaps = 6/101 (5%)
Query: 703 HRQAPVFTVPLSNIDDL---REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTF 759
+++AP +T L F +P + W NGK K R +
Sbjct: 1 NKRAPYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGY 58
Query: 760 CDFGFV-ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
L + V P D G Y+C N+YG + + V
Sbjct: 59 KVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 69.0 bits (169), Expect = 4e-14
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 16/104 (15%)
Query: 1422 KQPPRFVTQIKTQDQLVEM---QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
K+ P + K + +L + + KF C G+P + W NGK ++R
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRI---- 55
Query: 1479 DFGYVAMNFGW------VYPEDSGEYLCRATNLYGMDETRAILK 1516
GY N W V P D G Y C N YG L
Sbjct: 56 -GGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98
Score = 67.5 bits (165), Expect = 2e-13
Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 6 DPNLKIEWFKNGVPLSLGSRI-RSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+P + W KNG RI +L + S+ D YTC N G T
Sbjct: 35 NPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 94
Query: 65 CTLKI 69
L +
Sbjct: 95 YHLDV 99
Score = 67.1 bits (164), Expect = 2e-13
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 6/97 (6%)
Query: 1053 PPVFTSQLQD---NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF 1109
P +T+ + VP A V F C +P + W NG+ F R+
Sbjct: 4 APYWTNTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGYKVR 61
Query: 1110 -GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
SL M+ V D G Y C N++G+ +
Sbjct: 62 NQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98
Score = 63.2 bits (154), Expect = 4e-12
Identities = 25/107 (23%), Positives = 36/107 (33%), Gaps = 12/107 (11%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P + + VP A V F C +P + W NG+ F R+
Sbjct: 5 PYWT----NTEKMEKRLHAVPAANTVKFRCPAG--GNPMPTMRWLKNGKEFKQEHRIGGY 58
Query: 557 YDF-GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI 602
SL M+ V D G Y C N++G+ L V+
Sbjct: 59 KVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYH-----LDVV 100
Score = 58.6 bits (142), Expect = 2e-10
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 407 QPPKFTSHIK---SLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVS 462
+ P +T+ K L + ++ F C P +P + W NGK ++R+
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRC---PAGGNPMPTMRWLKNGKEFKQEHRIGGYK 59
Query: 463 DFGFV-VMDIAYVQSHDSGEYVCRAWN 488
+ + V D G Y C N
Sbjct: 60 VRNQHWSLIMESVVPSDKGNYTCVVEN 86
Score = 55.5 bits (134), Expect = 2e-09
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAF-GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
T+ +L NGK + HRI L + D G YTC N++G + +L+
Sbjct: 39 TMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98
Score = 51.3 bits (123), Expect = 6e-08
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 1/59 (1%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDF-GIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ W NGK+ HR + L + + G Y C N+YGS L
Sbjct: 40 MRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98
Score = 50.5 bits (121), Expect = 1e-07
Identities = 12/57 (21%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYV-ALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
W N K + +L + D G YT N GS + L
Sbjct: 42 WLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 98
Score = 49.4 bits (118), Expect = 3e-07
Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 1560 KEAPVFVS----QPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
K AP + + + V +F G P P + WL NG E
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQE 52
Score = 45.9 bits (109), Expect = 5e-06
Identities = 16/97 (16%), Positives = 24/97 (24%), Gaps = 24/97 (24%)
Query: 109 PVFIS----HLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
P + + V F C G P + W N
Sbjct: 5 PYWTNTEKMEKRLHAVPAANTVKFRCPAG---------GN----------PMPTMRWLKN 45
Query: 165 GKPIFHKNRVKMVSDFGFV-VMDIAYVQSHDSGEYVC 200
GK ++R+ + + V D G Y C
Sbjct: 46 GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTC 82
Score = 44.7 bits (106), Expect = 1e-05
Identities = 18/113 (15%), Positives = 30/113 (26%), Gaps = 22/113 (19%)
Query: 1262 EEPPRFITEI----ESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAF 1317
+ P + V A V+F +P + + F I
Sbjct: 2 KRAPYWTNTEKMEKRLHAVPAANTVKFRCPAGG--NPMPTMRWLKNGKEFKQEHRIGGYK 59
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
+ SL ++ V P D+G Y C N++G
Sbjct: 60 VRNQHW----------------SLIMESVVPSDKGNYTCVVENEYGSINHTYH 96
Score = 43.6 bits (103), Expect = 3e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
+ V P D G Y+C N+YG + + V
Sbjct: 68 IMESVVPSDKGNYTCVVENEYGSINHTYHLDV 99
Score = 35.5 bits (82), Expect = 0.023
Identities = 8/35 (22%), Positives = 10/35 (28%), Gaps = 4/35 (11%)
Query: 1853 EAPTVAEPLK----DQNVKEGSAVTLKCRITGKPR 1883
AP K V + V +C G P
Sbjct: 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPM 37
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region
plasiticity, cell adhesion; HET: PG6; 2.50A {Homo
sapiens} PDB: 3alp_A* 3u82_B 3sku_E* 2l7j_A
Length = 331
Score = 89.0 bits (220), Expect = 8e-19
Identities = 36/320 (11%), Positives = 76/320 (23%), Gaps = 64/320 (20%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVM---WL-INGHTIVNEIVRKITATETT 1617
V ++ G C+ P ++ W + N + + +
Sbjct: 15 SQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSV 74
Query: 1618 EMEHKGKIQE----------RVVDASEK-------------------------PAKPPVF 1642
++ +++ R+ + AKP +
Sbjct: 75 LAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNW 134
Query: 1643 TKKIQPCRAFEQDQARFEVEF-----DGDPLPTIKWFRED--FPITSSPDFQIHTFSTKS 1695
+ Q ++ Q + +G P + W T + S
Sbjct: 135 IEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS 194
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
+ A I + K S L V+ + P +
Sbjct: 195 RYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYE---------PEVTIEGFDGNWYL 245
Query: 1756 VGQLARFDAKISAT-KPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAV-VEDSGAY 1813
+ K A + +W + + + TL + +G Y
Sbjct: 246 QRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNR------TLFFKGPINYSLAGTY 299
Query: 1814 ECVAMNNAGEARCEAELVVQ 1833
C A N G + E+ +
Sbjct: 300 ICEATNPIGTRSGQVEVNIT 319
Score = 87.5 bits (216), Expect = 2e-18
Identities = 43/261 (16%), Positives = 77/261 (29%), Gaps = 19/261 (7%)
Query: 337 DQTMTVEFLYNGKPIEASHRIR---TVHAFGMVVLEILGTKIEDTGVYTCRA-TNKWGQA 392
Q + + G + A +R R +F + + ++ED GVY C T G
Sbjct: 60 KQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNR 119
Query: 393 EISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
E +NL V + T + + +D CT + P V W K
Sbjct: 120 ESQLNLT-VMAKPTNWIEGTQAVLRAKKGQDDKVLVATCT-SANGKPPSVVSWETRLKGE 177
Query: 453 FHKNRVKMVSDFGFVVMD---IAYVQSHDSGEYVCRAWNNFIFIP-PFPIFIFHQIRLPS 508
++ + V+ + + C + + + ++ +
Sbjct: 178 AEYQEIR-NPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTI 236
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
D + V C + ++P W G +
Sbjct: 237 EGFDGNWYLQRMDVKLTC--KADANPPATEYHWTTLNGSLPKGVEAQ-----NRTLFFKG 289
Query: 568 YVYARDSGEYICRATNKWGTA 588
+ +G YIC ATN GT
Sbjct: 290 PINYSLAGTYICEATNPIGTR 310
Score = 77.1 bits (189), Expect = 7e-15
Identities = 36/315 (11%), Positives = 69/315 (21%), Gaps = 75/315 (23%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE--LKVEWFHNGKPIF------------ 453
P + S+ G G C+ +V W +
Sbjct: 14 PSQVVQVNDSMYGFI-GTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGV 72
Query: 454 -----HKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVCRAWNNF-----------IFIPPF 496
++ RV+ + F + ++ ++ D G Y+C + P
Sbjct: 73 SVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPT 132
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
Q L + + + C P + W + A ++
Sbjct: 133 NWIEGTQAVLRAKK-----GQDDKVLVATCTS-ANGKPPSVVSWETRLKGEAEYQEIRNP 186
Query: 557 YDFGFIS--LDMDYVYARDSGEYICRATNKWGTAMTKAKVI------------------- 595
+ + C +
Sbjct: 187 NGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQ 246
Query: 596 -------CKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYEC 644
CK W LP G + F ++ +G Y C
Sbjct: 247 RMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTLFFKGPIN-----YSLAGTYIC 301
Query: 645 RATNKYGSDVTKASL 659
ATN G+ + +
Sbjct: 302 EATNPIGTRSGQVEV 316
Score = 75.2 bits (184), Expect = 3e-14
Identities = 29/229 (12%), Positives = 57/229 (24%), Gaps = 22/229 (9%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
+ + ED G+Y + S L + N+ + + +
Sbjct: 94 IRLSRLELEDEGVYICEFATFPTGNRESQL--NLTVMAKPTNWIEGTQAVLRAKKGQDDK 151
Query: 325 IAHFE---ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
+ A+ P + + E + TV ++ ++
Sbjct: 152 VLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVIS--RYRLVPSREAHQQSL 209
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLT--PVNDP 439
C + + S+ L V P+ T C P P
Sbjct: 210 ACIVNYHMDRFKESLTLN-VQ----YEPEVTIEGFDGNWYLQRMDVKLTCKADANP---P 261
Query: 440 ELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ W + K V + + +G Y+C A N
Sbjct: 262 ATEYHWTTLNGSL-----PKGVEAQNRTLFFKGPINYSLAGTYICEATN 305
Score = 72.9 bits (178), Expect = 2e-13
Identities = 37/350 (10%), Positives = 75/350 (21%), Gaps = 77/350 (22%)
Query: 107 DSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
D + + + +V C + +V W +
Sbjct: 13 DPSQVVQVNDSMYGFIGTDVVLHCSFANPLP---------------SVKITQVTWQKSTN 57
Query: 167 PIF-----------------HKNRVKMVSD-FGFVVMDIAYVQSHDSGEYVCQWF----- 203
++ RV+ + F + ++ ++ D G Y+C++
Sbjct: 58 GSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTG 117
Query: 204 ---------VNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV------PFTEWFVNNKPL 248
V KP + D L+ W K
Sbjct: 118 NRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGE 177
Query: 249 PAGAKFKTTHDFGYVA--LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHN 306
+ + + V +V + S TL V +
Sbjct: 178 AEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLN------VQY- 230
Query: 307 YPLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFG 364
P +++ + + A P + + +
Sbjct: 231 EPEVTIEGFDGNWYLQRMDVKLTCKADANP---PATEYHWTTLNGSLPKGVEAQ-----N 282
Query: 365 MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
+ G Y C ATN G V + + H
Sbjct: 283 RTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITE-----AAALEHH 327
Score = 72.1 bits (176), Expect = 3e-13
Identities = 42/335 (12%), Positives = 87/335 (25%), Gaps = 43/335 (12%)
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLT--PTDDPKLKVEWFWNGKPMK---- 751
T + + P V +++ G + +V W + K
Sbjct: 5 TGGQQMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVA 64
Query: 752 -------------TGSRFRTFCD-FGFVILEISPVYPEDCGQYSCRAYND-YGEAVTSAS 796
R F + +S + ED G Y C G + +
Sbjct: 65 IYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLN 124
Query: 797 MKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
+ V K + +E + +C + + + +
Sbjct: 125 LTVMAKPTNWIEGTQAVL--------RAKKGQDDKVLVATCTS----ANGKPPSVVSWET 172
Query: 857 KRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDK-IAELEGYGHEREDRIEEDLGK 915
+ E Q + GT+ I+ + I ++ + ++
Sbjct: 173 RLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMD--RFKESLTLNVQY 230
Query: 916 APEFLTTPTD-LTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
PE D + C+ N P+ W +L G +
Sbjct: 231 EPEVTIEGFDGNWYLQRMDVKLTCKAD-ANPPATEYHWTTLNGSLPKGVEAQ-----NRT 284
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+ + +G Y C+ATN G + ++ +
Sbjct: 285 LFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319
Score = 72.1 bits (176), Expect = 3e-13
Identities = 32/230 (13%), Positives = 47/230 (20%), Gaps = 58/230 (25%)
Query: 917 PEFLTTPTDLTL-----AESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF 971
P T L + + C + P V W K + I+ N
Sbjct: 131 PTNWIEGTQAVLRAKKGQDDKVLVATCT-SANGKPPSVVSWETRLKGEAEYQEIRNPNGT 189
Query: 972 GFV--ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATK 1029
V + C S L V+
Sbjct: 190 VTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY------------------- 230
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT-MRI 1088
P T + D + V C + ++P
Sbjct: 231 -----------------------EPEVTIEGFDGNWYLQRMDVKLTC--KADANPPATEY 265
Query: 1089 DWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
W G + + +G YIC ATN GT
Sbjct: 266 HWTTLNGSLPKGVEAQ-----NRTLFFKGPINYSLAGTYICEATNPIGTR 310
Score = 70.9 bits (173), Expect = 8e-13
Identities = 38/349 (10%), Positives = 73/349 (20%), Gaps = 109/349 (31%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPT--MRIDWFFNGRP---------FATGSRVKTVY-- 557
D++ V C ++ W + + G V Y
Sbjct: 21 NDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRE 80
Query: 558 -------DFGFISLDMDYVYARDSGEYICRA-TNKWGTAMTKAKVI-------------- 595
F ++ + + D G YIC T G ++ +
Sbjct: 81 RVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQA 140
Query: 596 ----------------CKVLT----VIVEWFYNGKKLPHGHRYRTFHDFGIV--ILDILY 633
C +V W K R + V ++
Sbjct: 141 VLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVP 200
Query: 634 CYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHL 693
E + C +L
Sbjct: 201 SREAHQQSLACIVNYHMDRFKESLTL---------------------------------- 226
Query: 694 RRTETADIEHRQAPVFTVPLSNIDDLREGENAHFE--ARLTPTDDPKLKVEWFWNGKPMK 751
++++ P T+ + + + + A P P + W +
Sbjct: 227 ------NVQY--EPEVTIEGFDGNWYLQRMDVKLTCKADANP---PATEYHWTTLNGSLP 275
Query: 752 TGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
G + + P+ G Y C A N G + +
Sbjct: 276 KGVEAQ-----NRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNIT 319
Score = 70.2 bits (171), Expect = 1e-12
Identities = 44/352 (12%), Positives = 80/352 (22%), Gaps = 84/352 (23%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPN--MKVEWFLNGKPLP---------HK 1471
+ P V Q+ C A +V W +
Sbjct: 12 RDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMG 71
Query: 1472 NRFNPIYDFGYVAMNFGW---------VYPEDSGEYLCRA-TNLYGMDETRAILKTTGKP 1521
Y + + + ED G Y+C T G E++ L KP
Sbjct: 72 VSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKP 131
Query: 1522 GIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPAR 1581
E A+K Q+ +
Sbjct: 132 TNWIEGTQA-------------------------------------VLRAKKGQDDKVLV 154
Query: 1582 F-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM----------EHKGKIQERV- 1629
CT G P V W + T + H+ + V
Sbjct: 155 ATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214
Query: 1630 --VDASEKPAK------PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPI 1680
+D ++ P V + ++ + + D +P T W + +
Sbjct: 215 YHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSL 274
Query: 1681 TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+++ + +G + A N G + + E
Sbjct: 275 PKG-----VEAQNRTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEA 321
Score = 64.4 bits (156), Expect = 1e-10
Identities = 31/276 (11%), Positives = 62/276 (22%), Gaps = 61/276 (22%)
Query: 1639 PPVFTKKIQPCRAFEQDQA----RFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK 1694
P + F F + + W + + +
Sbjct: 14 PSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVS 73
Query: 1695 SI------------------LIMRQVFMEDSGVFA-VIAENRGGKAKCSANLVVEEKRQG 1735
+ + + ++ +ED GV+ A G + NL V
Sbjct: 74 VLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTV------ 127
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKI------SATKPLDVYWLKNGKKIIPDIRY 1789
+ P+ + AV+ + + + P V W K
Sbjct: 128 ----MAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEI 183
Query: 1790 KTLEEDNLF--TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGA 1847
+ ++ + + C+ + + L VQ
Sbjct: 184 RNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQ-------------- 229
Query: 1848 AVAQDEAPTVA-EPLKDQNVKEGSAVTLKCRITGKP 1882
P V E + V L C+ P
Sbjct: 230 -----YEPEVTIEGFDGNWYLQRMDVKLTCKADANP 260
Score = 61.7 bits (149), Expect = 7e-10
Identities = 28/359 (7%), Positives = 67/359 (18%), Gaps = 93/359 (25%)
Query: 1257 EDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTA 1316
++ +P + + +S+ V + + + + N++
Sbjct: 7 GQQMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIY 66
Query: 1317 FLIFNFCLHAVIFSHPIF---DLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISC 1373
+ A F ++ + + ED+G Y+C
Sbjct: 67 NPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRES----- 121
Query: 1374 KKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKT 1433
+ L P
Sbjct: 122 ----QLNLTVMAK--------------------------------PTNWIEGTQAVL--R 143
Query: 1434 QDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLP-HKNRFNPIYDFGYVAM-NFGWVY 1491
+ + + C + G P V W K ++ NP ++
Sbjct: 144 AKKGQDDKVLVATCT-SANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSR 202
Query: 1492 PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPE 1551
C + L +P
Sbjct: 203 EAHQQSLACIVNYHMDRFKESLTLNVQYEP------------------------------ 232
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIV 1608
V + + + + C + P W ++ +
Sbjct: 233 -----------EVTIEGFDGNWYLQRMDVKLTC-KADANPPATEYHWTTLNGSLPKGVE 279
Score = 57.8 bits (139), Expect = 1e-08
Identities = 24/201 (11%), Positives = 44/201 (21%), Gaps = 60/201 (29%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--TLSINSLRADDSAIYTCKATNLLGE 60
P + W + IR+ V + R C +
Sbjct: 160 ANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDR 219
Query: 61 AVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVEC 120
+ TL + +P+ V I +
Sbjct: 220 FKESLTLNV---------------------QYEPE--------------VTIEGFDGNWY 244
Query: 121 KENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 180
+ +V C+ DA N P + W + K V
Sbjct: 245 LQRMDVKLTCKA----DA--------------NPPATEYHWTTLNGSL-----PKGVEAQ 281
Query: 181 GFVVMDIAYVQSHDSGEYVCQ 201
+ + +G Y+C+
Sbjct: 282 NRTLFFKGPINYSLAGTYICE 302
Score = 54.4 bits (130), Expect = 2e-07
Identities = 16/106 (15%), Positives = 31/106 (29%), Gaps = 8/106 (7%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDP-NMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P + + ++ K C+ +P + W LP +
Sbjct: 231 EPEVTIEGFDGNWYLQRMDVKLTCKAD--ANPPATEYHWTTLNGSLP-----KGVEAQNR 283
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQ 1528
G + +G Y+C ATN G + + T + +
Sbjct: 284 TLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAALEHHHH 329
Score = 51.7 bits (123), Expect = 1e-06
Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 5/65 (7%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
P + W L G ++ + + Y C+ATN +G
Sbjct: 261 PATEYHWTTLNGSLPKGVEAQNR-----TLFFKGPINYSLAGTYICEATNPIGTRSGQVE 315
Query: 67 LKIED 71
+ I +
Sbjct: 316 VNITE 320
Score = 51.3 bits (122), Expect = 1e-06
Identities = 25/252 (9%), Positives = 49/252 (19%), Gaps = 64/252 (25%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKTIN----- 969
+ + + T C + V W + I +
Sbjct: 15 SQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSV 74
Query: 970 -------------DFGFVILEINDVYLRDSGLYTCKA-TNKHGEATTSCKLTVKGRQGID 1015
F + ++ + L D G+Y C+ T G + LTV
Sbjct: 75 LAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVM------ 128
Query: 1016 VEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGK-VHF 1074
KP + +Q + K +
Sbjct: 129 ---------------------------------AKPTNWIEGTQAVLRAKKGQDDKVLVA 155
Query: 1075 DCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS--LDMDYVYARDSGEYICRAT 1132
C P + W + A ++ + + C
Sbjct: 156 TCTS-ANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVN 214
Query: 1133 NKWGTAMTKAKV 1144
+
Sbjct: 215 YHMDRFKESLTL 226
Score = 48.6 bits (115), Expect = 1e-05
Identities = 40/322 (12%), Positives = 78/322 (24%), Gaps = 97/322 (30%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTF---DFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
N+ I GV + R R F F T+ ++ L +D +Y C+
Sbjct: 60 KQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNR 119
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
+ +L A P +R + + +
Sbjct: 120 ES------------QLNLTVMAKPTNWIEGTQAVLRAKKGQ------------------D 149
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 182
++ + C K P V W K ++ +
Sbjct: 150 DKVLVATCTSANGK------------------PPSVVSWETRLKGEAEYQEIR-NPNGTV 190
Query: 183 VVMD---IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDI----ELMLKTL 235
V+ + + C VN ++ + L++ E+ ++
Sbjct: 191 TVISRYRLVPSREAHQQSLACI--VNY---HMDRFKES------LTLNVQYEPEVTIEGF 239
Query: 236 VPFT----------------------EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAE 273
W N LP G + +
Sbjct: 240 DGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRT-----LFFKGPINYS 294
Query: 274 DSGIYTVKATNSKGSATTSGTL 295
+G Y +ATN G+ + +
Sbjct: 295 LAGTYICEATNPIGTRSGQVEV 316
Score = 45.1 bits (106), Expect = 1e-04
Identities = 28/172 (16%), Positives = 48/172 (27%), Gaps = 38/172 (22%)
Query: 1735 GGRGGVVPPSFLTTISSAVINVGQLA----RFDAKISATKPLDVYWLKNGKKIIPDI--- 1787
G + G P + S +G F + + K V W K+ ++
Sbjct: 7 GQQMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIY 66
Query: 1788 --------------RYKTLE-EDNLFTLLIIEAVVEDSGAYEC-VAMNNAGEARCEAELV 1831
R + L T+ + +ED G Y C A G + L
Sbjct: 67 NPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLT 126
Query: 1832 VQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRI-TGKP 1882
V +K + L+ + ++ + C GKP
Sbjct: 127 VMAKPTNWIEGTQA--------------VLRAKKGQDDKVLVATCTSANGKP 164
Score = 36.3 bits (83), Expect = 0.096
Identities = 22/140 (15%), Positives = 41/140 (29%), Gaps = 22/140 (15%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT--MRIDWFFNGRP---------FATGS 1101
P Q+ D++ V C ++ W + + G
Sbjct: 13 DPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGV 72
Query: 1102 RVKTVY---------DFGFISLDMDYVYARDSGEYICRA-TNKWGTAMTKAKVICKAKHD 1151
V Y F ++ + + D G YIC T G ++ + AK
Sbjct: 73 SVLAPYRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPT 132
Query: 1152 IVTESQLPDSMSAEKLKELE 1171
E + A+K ++ +
Sbjct: 133 NWIEGT-QAVLRAKKGQDDK 151
Score = 35.5 bits (81), Expect = 0.15
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQ 1380
+ G Y+C A N G + ++ + ++
Sbjct: 285 LFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITEAAALE 325
Score = 30.5 bits (68), Expect = 5.2
Identities = 6/37 (16%), Positives = 9/37 (24%)
Query: 1846 GAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
G + V + G+ V L C
Sbjct: 6 GGQQMGRDPSQVVQVNDSMYGFIGTDVVLHCSFANPL 42
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 113
Score = 82.9 bits (205), Expect = 8e-19
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS 1695
+ V+ A ++ E P ++W ++ + SP + T
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTCEL-CRPWAEVRWTKDGEEVVESPALLLQKEDTVR 68
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L++ V +EDSG + S + V E
Sbjct: 69 RLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEP 101
Score = 82.1 bits (203), Expect = 1e-18
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 7/108 (6%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
+ + + C L P V W +G+ + + +
Sbjct: 12 SWIVYPSGKVYVAAVRLERVVLTCELC---RPWAEVRWTKDGEEVVESPALLLQKEDTVR 68
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSA 1022
L + V L DSG Y C+ + + S +TV + S+
Sbjct: 69 RLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSGPSS 112
Score = 77.5 bits (191), Expect = 6e-17
Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 1736 GRGGVVPPSFLTTIS---SAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL 1792
G G S++ S + ++ +V W K+G++++
Sbjct: 4 GSSGTDVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWA-EVRWTKDGEEVVESPALLLQ 62
Query: 1793 EEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+ED + L++ +EDSG Y C + + V
Sbjct: 63 KEDTVRRLVLPAVQLEDSGEYLCE----IDDESASFTVTVTEP 101
Score = 69.0 bits (169), Expect = 6e-14
Identities = 19/107 (17%), Positives = 32/107 (29%), Gaps = 9/107 (8%)
Query: 706 APVFTVPLSNIDDL--REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
+ V S + E L P +V W +G+ + +
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTCELC---RPWAEVRWTKDGEEVVESPALLLQKEDT 66
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 810
L + V ED G+Y C + S ++ V I+ S
Sbjct: 67 VRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSG 109
Score = 64.8 bits (158), Expect = 2e-12
Identities = 20/113 (17%), Positives = 32/113 (28%), Gaps = 9/113 (7%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
+ + V+ S + +V C L P + W +G + +
Sbjct: 9 DVSSWIVYPSGKVY-VAAVRLERVVLTCEL---CRPWAEVRWTKDGEEVVESPALLLQKE 64
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDS 1161
L + V DSGEY+C V + S P S
Sbjct: 65 DTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYS-GPSS 112
Score = 64.0 bits (156), Expect = 4e-12
Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 5/85 (5%)
Query: 404 SKGQPPKFTSHIKSLEGLK--DGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 461
S + + + + C L P +V W +G+ + + +
Sbjct: 6 SGTDVSSWIVYPSGKVYVAAVRLERVVLTCELC---RPWAEVRWTKDGEEVVESPALLLQ 62
Query: 462 SDFGFVVMDIAYVQSHDSGEYVCRA 486
+ + + VQ DSGEY+C
Sbjct: 63 KEDTVRRLVLPAVQLEDSGEYLCEI 87
Score = 61.7 bits (150), Expect = 2e-11
Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P ++ W K+G + + + + L + +++ +DS Y C+ + ++
Sbjct: 38 CRPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEI----DDESAS 93
Query: 65 CTLKIEDR 72
T+ + +
Sbjct: 94 FTVTVTEP 101
Score = 61.3 bits (149), Expect = 3e-11
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 1424 PPRFVTQIKTQDQL--VEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
++ + + V ++ C+ + P +V W +G+ + +
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTCE---LCRPWAEVRWTKDGEEVVESPALLLQKEDT 66
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQ 1528
+ V EDSGEYLC + + + T P I S
Sbjct: 67 VRRLVLPAVQLEDSGEYLCEIDD----ESASFTVTVTEPPVRIIYSG 109
Score = 60.5 bits (147), Expect = 5e-11
Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 24/128 (18%)
Query: 287 GSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEF 344
GS+ +SGT + + ++ E + V +
Sbjct: 1 GSSGSSGTDV-----------SSWIVYPSGKVYVAAVRLERVVLTCE---LCRPWAEVRW 46
Query: 345 LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKS 404
+G+ + S + + L + ++ED+G Y C ++ ++V
Sbjct: 47 TKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDESASFTVTV-------- 98
Query: 405 KGQPPKFT 412
P +
Sbjct: 99 TEPPVRII 106
Score = 59.4 bits (144), Expect = 1e-10
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 20/93 (21%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V+ S V E V C + P +V W +G+ +
Sbjct: 14 IVYPSGKVYVAAVRLERVVLTCEL--------------------CRPWAEVRWTKDGEEV 53
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + + + + VQ DSGEY+C+
Sbjct: 54 VESPALLLQKEDTVRRLVLPAVQLEDSGEYLCE 86
Score = 58.2 bits (141), Expect = 4e-10
Identities = 16/110 (14%), Positives = 29/110 (26%), Gaps = 15/110 (13%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
+ ++ + + +V C L P + W +G +
Sbjct: 11 SSWIVY--------PSGKVYVAAVRLERVVLTCEL---CRPWAEVRWTKDGEEVVESPAL 59
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+ L + V DSGEY+C V V +
Sbjct: 60 LLQKEDTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRI 105
Score = 48.6 bits (116), Expect = 9e-07
Identities = 9/50 (18%), Positives = 16/50 (32%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W + + + + L + EDSG Y + + S T
Sbjct: 46 WTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDDESASFT 95
Score = 45.9 bits (109), Expect = 6e-06
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
V W +G+++ + + L + E+SG Y C + ++
Sbjct: 44 VRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVTVT 99
Query: 663 SKTNLILESQ 672
I+ S
Sbjct: 100 EPPVRIIYSG 109
Score = 35.9 bits (83), Expect = 0.019
Identities = 7/67 (10%), Positives = 17/67 (25%), Gaps = 9/67 (13%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTE 1618
V+ S E + P V W +G ++ +
Sbjct: 10 VSSWIVYPSGKVYVAAVRLERVVLTCELCR-PWAEVRWTKDG--------EEVVESPALL 60
Query: 1619 MEHKGKI 1625
++ + +
Sbjct: 61 LQKEDTV 67
Score = 35.9 bits (83), Expect = 0.024
Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 865
+ V ED G+Y C + S ++ V I+ S
Sbjct: 72 LPAVQLEDSGEYLCEI----DDESASFTVTVTEPPVRIIYSG 109
Score = 33.2 bits (76), Expect = 0.20
Identities = 19/125 (15%), Positives = 32/125 (25%), Gaps = 41/125 (32%)
Query: 1263 EPPRFI---TEIESVTVQEAEPVRFETRV---EPRV----DPRLRVECSLSTAFFFPFIN 1312
+ +I + V E V + V D +
Sbjct: 9 DVSSWIVYPSGKVYVAAVRLERVVLTCELCRPWAEVRWTKDGEE--------------VV 54
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
S A L+ + L + V ED GEY+C + T++
Sbjct: 55 ESPALLL-------------QKEDTVRRLVLPAVQLEDSGEYLCEI----DDESASFTVT 97
Query: 1373 CKKIP 1377
+ P
Sbjct: 98 VTEPP 102
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2;
IG domain, structural protein; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 104
Score = 82.0 bits (203), Expect = 1e-18
Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 1627 ERVVDASEKPAKPPVFTKKIQPC-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD 1685
EK F KK++P + + + R VE D +KW + I S
Sbjct: 5 HHHSSMDEKK--STAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGS 61
Query: 1686 -FQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
+ + K L + Q + D + + G KCS L V+E
Sbjct: 62 KYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFVKE 104
Score = 80.5 bits (199), Expect = 3e-18
Identities = 23/109 (21%), Positives = 36/109 (33%), Gaps = 11/109 (10%)
Query: 903 HEREDRIEEDLGKAPEFLTTPTDL-TLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
H ++E K+ F +++ L D V+W NG+ +
Sbjct: 4 HHHHSSMDEK--KSTAFQKKLEPAYQVSKGHKIRLTVELA---DHDAEVKWLKNGQEIQM 58
Query: 962 -GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
GS+ + L I+ L D Y C G S +L VK
Sbjct: 59 SGSKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFVK 103
Score = 79.3 bits (196), Expect = 1e-17
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Query: 1742 PPSFLTTISSAV-INVGQLARFDAKISATKPLDVYWLKNGKKIIPD-IRYKTLEEDNLFT 1799
+F + A ++ G R +++ +V WLKNG++I +Y T
Sbjct: 15 STAFQKKLEPAYQVSKGHKIRLTVELADHDA-EVKWLKNGQEIQMSGSKYIFESIGAKRT 73
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
L I + + D AY+CV G +C EL V+
Sbjct: 74 LTISQCSLADDAAYQCV----VGGEKCSTELFVK 103
Score = 78.2 bits (193), Expect = 3e-17
Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 8/107 (7%)
Query: 695 RTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMK-TG 753
+ ++ +++ F L + +G L D +V+W NG+ ++ +G
Sbjct: 4 HHHHSSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELA---DHDAEVKWLKNGQEIQMSG 60
Query: 754 SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
S++ L IS D Y C G S + V+
Sbjct: 61 SKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKCSTELFVK 103
Score = 71.6 bits (176), Expect = 5e-15
Identities = 13/80 (16%), Positives = 25/80 (31%), Gaps = 4/80 (5%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI-FHKNRVKMVSDFGF 466
F ++ + G + D + +V+W NG+ I ++ S
Sbjct: 15 STAFQKKLEPAYQVSKGHKIRLTVE---LADHDAEVKWLKNGQEIQMSGSKYIFESIGAK 71
Query: 467 VVMDIAYVQSHDSGEYVCRA 486
+ I+ D Y C
Sbjct: 72 RTLTISQCSLADDAAYQCVV 91
Score = 68.2 bits (167), Expect = 9e-14
Identities = 15/91 (16%), Positives = 30/91 (32%), Gaps = 4/91 (4%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF-ATGSRVKTVY 1107
++ F +L+ V + K+ L +D + W NG+ +GS+
Sbjct: 11 DEKKSTAFQKKLEPAYQVSKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFES 67
Query: 1108 DFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
+L + D Y C + +
Sbjct: 68 IGAKRTLTISQCSLADDAAYQCVVGGEKCST 98
Score = 63.9 bits (156), Expect = 3e-12
Identities = 12/97 (12%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPL-PHKNRFNPIY 1478
++K+ F +++ Q+ + + + + D + +V+W NG+ + +++
Sbjct: 11 DEKKSTAFQKKLEPAYQVSKGHKIRLTVE---LADHDAEVKWLKNGQEIQMSGSKYIFES 67
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ D Y C ++ L
Sbjct: 68 IGAKRTLTISQCSLADDAAYQCVVGG----EKCSTEL 100
Score = 61.6 bits (150), Expect = 2e-11
Identities = 14/96 (14%), Positives = 26/96 (27%), Gaps = 22/96 (22%)
Query: 108 SPVFISHLND-VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGK 166
S F L + + + + D + +V+W NG+
Sbjct: 15 STAFQKKLEPAYQVSKGHKIRLTVEL--------------------ADHDAEVKWLKNGQ 54
Query: 167 PI-FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
I ++ S + I+ D Y C
Sbjct: 55 EIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCV 90
Score = 60.1 bits (146), Expect = 5e-11
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 5 ADPNLKIEWFKNGVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
AD + +++W KNG + + GS+ TL+I+ D A Y C G
Sbjct: 41 ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV----GGEKC 96
Query: 64 TCTLKIED 71
+ L +++
Sbjct: 97 STELFVKE 104
Score = 58.9 bits (143), Expect = 1e-10
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 4/90 (4%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS-HRIRTVHAFGMV 366
F + + +S+G + D V++L NG+ I+ S +
Sbjct: 16 TAFQKKLEPAYQVSKGHKIRLTVE---LADHDAEVKWLKNGQEIQMSGSKYIFESIGAKR 72
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISV 396
L I + D Y C + E+ V
Sbjct: 73 TLTISQCSLADDAAYQCVVGGEKCSTELFV 102
Score = 55.1 bits (133), Expect = 4e-09
Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 4/79 (5%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF-ATGSRVKTVYDFGFISLDMDYV 569
+ V + K+ L +D + W NG+ +GS+ +L +
Sbjct: 23 EPAYQVSKGHKIRLTVEL---ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQC 79
Query: 570 YARDSGEYICRATNKWGTA 588
D Y C + +
Sbjct: 80 SLADDAAYQCVVGGEKCST 98
Score = 47.4 bits (113), Expect = 2e-06
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 591 KAKVICKVL--TVIVEWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
K ++ ++ V+W NG+++ G +Y L I C + Y+C
Sbjct: 33 KIRLTVELADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV- 91
Query: 648 NKYGSDVTKASL 659
G + L
Sbjct: 92 ---GGEKCSTEL 100
Score = 47.0 bits (112), Expect = 2e-06
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 1/52 (1%)
Query: 240 EWFVNNKPL-PAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
+W N + + +G+K+ L I D Y K S
Sbjct: 48 KWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVGGEKCSTE 99
Score = 42.4 bits (100), Expect = 9e-05
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Query: 1559 PKEAPVFVSQ-PEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
K++ F + A +V +G R + V WL NG I
Sbjct: 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVELAD-HDAEVKWLKNGQEIQMS 59
Score = 36.6 bits (85), Expect = 0.011
Identities = 16/113 (14%), Positives = 28/113 (24%), Gaps = 34/113 (30%)
Query: 1261 PEEPPRFITEIE-SVTVQEAEPVRFETRVEPRVDPRLRV-------ECSLSTAFFFPFIN 1312
++ F ++E + V + +R + D V E I
Sbjct: 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVELA---DHDAEVKWLKNGQE-----------IQ 57
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+S + IF +L I D Y C +
Sbjct: 58 MSGSKYIF------------ESIGAKRTLTISQCSLADDAAYQCVVGGEKCST 98
Score = 36.2 bits (84), Expect = 0.013
Identities = 4/37 (10%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 1847 AAVAQDEAPTVAEPLKD-QNVKEGSAVTLKCRITGKP 1882
+++ + ++ + L+ V +G + L +
Sbjct: 8 SSMDEKKSTAFQKKLEPAYQVSKGHKIRLTVELADHD 44
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 104
Score = 80.1 bits (198), Expect = 6e-18
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 10/97 (10%)
Query: 916 APEFLTTP---TDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFG 972
P + +P LT S C L+ W+ +G+ + + D
Sbjct: 7 GPVHILSPQDKVSLTFTTSERVVLTCELS---RVDFPATWYKDGQKVEESELLVVKMDGR 63
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
L + + ++DSG + C+ + +TV+
Sbjct: 64 KHRLILPEAKVQDSGEFECRT----EGVSAFFGVTVQ 96
Score = 75.9 bits (187), Expect = 2e-16
Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 1736 GRGGVVPPSFLTT---ISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL 1792
G G P + + S + ++S W K+G+K+
Sbjct: 1 GSSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDF-PATWYKDGQKVEESELLVVK 59
Query: 1793 EEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+ L++ EA V+DSG +EC + VQ P
Sbjct: 60 MDGRKHRLILPEAKVQDSGEFECR----TEGVSAFFGVTVQDPSGP 101
Score = 72.8 bits (179), Expect = 2e-15
Identities = 14/101 (13%), Positives = 30/101 (29%), Gaps = 8/101 (7%)
Query: 1634 EKPAKPPVF---TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
+ PV + ++ E W+++ + S +
Sbjct: 2 SSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDGQKVEESELLVVKM 60
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
K LI+ + ++DSG F E + V++
Sbjct: 61 DGRKHRLILPEAKVQDSGEFECRTEG----VSAFFGVTVQD 97
Score = 67.8 bits (166), Expect = 1e-13
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 9/97 (9%)
Query: 706 APVFTVPLSNIDDL--REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
PV + + L E L+ W+ +G+ ++ D
Sbjct: 7 GPVHILSPQDKVSLTFTTSERVVLTCELS---RVDFPATWYKDGQKVEESELLVVKMDGR 63
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L + +D G++ CR + VQ
Sbjct: 64 KHRLILPEAKVQDSGEFECRT----EGVSAFFGVTVQ 96
Score = 64.3 bits (157), Expect = 2e-12
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 11/90 (12%)
Query: 404 SKGQPPKFTSHIKSLEGLKD-----GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 458
S P I S + + C ++ + W+ +G+ + +
Sbjct: 3 SGSSGPVH---ILSPQDKVSLTFTTSERVVLTCE---LSRVDFPATWYKDGQKVEESELL 56
Query: 459 KMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ D + + + DSGE+ CR
Sbjct: 57 VVKMDGRKHRLILPEAKVQDSGEFECRTEG 86
Score = 61.6 bits (150), Expect = 2e-11
Identities = 9/67 (13%), Positives = 23/67 (34%), Gaps = 4/67 (5%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+ + W+K+G + + D L + + DS + C+ +
Sbjct: 35 SRVDFPATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT----EGVSAF 90
Query: 65 CTLKIED 71
+ ++D
Sbjct: 91 FGVTVQD 97
Score = 61.3 bits (149), Expect = 2e-11
Identities = 14/96 (14%), Positives = 30/96 (31%), Gaps = 23/96 (23%)
Query: 109 PVFISH---LNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
PV I + +E V C + + + W+ +G
Sbjct: 8 PVHILSPQDKVSLTFTTSERVVLTCEL--------------------SRVDFPATWYKDG 47
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + + + D + + + DSGE+ C+
Sbjct: 48 QKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECR 83
Score = 59.3 bits (144), Expect = 1e-10
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 308 PLFSLQFQHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGM 365
P+ L Q +L+ E + + +G+ +E S +
Sbjct: 8 PVHILSPQDKVSLTFTTSERVVLTCE---LSRVDFPATWYKDGQKVEESELLVVKMDGRK 64
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
L + K++D+G + CR ++V
Sbjct: 65 HRLILPEAKVQDSGEFECRTEGVSAFFGVTVQ 96
Score = 58.9 bits (143), Expect = 2e-10
Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 1053 PPVFTSQLQD--NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
PV QD +L + +V C L S W+ +G+ + D
Sbjct: 7 GPVHILSPQDKVSLTFTTSERVVLTCEL---SRVDFPATWYKDGQKVEESELLVVKMDGR 63
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTAM 1139
L + +DSGE+ CR
Sbjct: 64 KHRLILPEAKVQDSGEFECRTEGVSAFFG 92
Score = 58.6 bits (142), Expect = 2e-10
Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 8/93 (8%)
Query: 1424 PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P ++ + C+ + + W+ +G+ + D
Sbjct: 8 PVHILSPQDKVSLTFTTSERVVLTCE---LSRVDFPATWYKDGQKVEESELLVVKMDGRK 64
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+ +DSGE+ CR +
Sbjct: 65 HRLILPEAKVQDSGEFECRTEG----VSAFFGV 93
Score = 54.7 bits (132), Expect = 5e-09
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 8/93 (8%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P+ I L + +L + +V C L S W+ +G+ +
Sbjct: 8 PVHI-----LSPQDKVSLTFTTSERVVLTCEL---SRVDFPATWYKDGQKVEESELLVVK 59
Query: 557 YDFGFISLDMDYVYARDSGEYICRATNKWGTAM 589
D L + +DSGE+ CR
Sbjct: 60 MDGRKHRLILPEAKVQDSGEFECRTEGVSAFFG 92
Score = 49.3 bits (118), Expect = 4e-07
Identities = 7/51 (13%), Positives = 15/51 (29%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W+ + + + D L + A +DSG + +
Sbjct: 42 TWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRTEGVSAFFG 92
Score = 47.0 bits (112), Expect = 3e-06
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 4/57 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
W+ +G+K+ D L + ++SG +ECR +
Sbjct: 41 ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT----EGVSAFFGV 93
Score = 40.5 bits (95), Expect = 5e-04
Identities = 17/113 (15%), Positives = 28/113 (24%), Gaps = 33/113 (29%)
Query: 1261 PEEPPRFIT---EIESVTVQEAEPVRFETRVEPRVDPRLR-----VECSLSTAFFFPFIN 1312
P I + S+T +E V + RVD + +
Sbjct: 4 GSSGPVHILSPQDKVSLTFTTSERVVLTCELS-RVDFPATWYKDGQK-----------VE 51
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
S ++ D L + +D GE+ CR
Sbjct: 52 ESELLVV-------------KMDGRKHRLILPEAKVQDSGEFECRTEGVSAFF 91
Score = 40.5 bits (95), Expect = 5e-04
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 12/73 (16%)
Query: 1557 EKPKEAPVFVSQPEA---QKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITA 1613
PV + P+ E ++ W +G +K+
Sbjct: 2 SSGSSGPVHILSPQDKVSLTFTTSERVVLTCELSR-VDFPATWYKDG--------QKVEE 52
Query: 1614 TETTEMEHKGKIQ 1626
+E ++ G+
Sbjct: 53 SELLVVKMDGRKH 65
Score = 32.8 bits (75), Expect = 0.23
Identities = 4/33 (12%), Positives = 7/33 (21%), Gaps = 3/33 (9%)
Query: 1853 EAP---TVAEPLKDQNVKEGSAVTLKCRITGKP 1882
P + V L C ++
Sbjct: 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVD 38
>2ch8_A BARF1, P33, 33 kDa early protein; viral protein, immunoglobulin
domain, oncogene; HET: NAG MAN; 2.3A {Epstein-barr virus}
Length = 201
Score = 83.2 bits (205), Expect = 6e-18
Identities = 24/182 (13%), Positives = 47/182 (25%), Gaps = 31/182 (17%)
Query: 1665 GDPLPTIKWFREDFPITS-----------------SPDFQIHTFSTKSILIMRQVFMEDS 1707
P + WF+ F IH + L++ +
Sbjct: 20 LGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 79
Query: 1708 GVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS 1767
G + + + +L V V P + + + ++
Sbjct: 80 GNYLCRMKLGETEVTKQEHLSV----------VKPLTLSVHSERSQFPDFSVLTVTCTVN 129
Query: 1768 ATKPLDVYWL-KNGKKIIP---DIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGE 1823
A V WL G + P + ++ +L + + CV N+ E
Sbjct: 130 AFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEE 189
Query: 1824 AR 1825
A
Sbjct: 190 AH 191
Score = 75.8 bits (186), Expect = 2e-15
Identities = 24/195 (12%), Positives = 41/195 (21%), Gaps = 40/195 (20%)
Query: 424 GDSAHFECTLTPVN-DPELKVEWFHNGKPIF-----------------HKNRVKMVSDFG 465
G+ V+ PE++V WF G + +
Sbjct: 6 GERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSAN 65
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNN--------FIFIPPFPIFIFHQIRLPSPSQDNLDVP 517
+ + G Y+CR + + H P
Sbjct: 66 TFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVH------SE--RSQFP 117
Query: 518 EAGKVHFDCRLEPKSDPTMRIDWFFNGR----PFATGSRVKTVYDFGFISLDMDYVYARD 573
+ + C + + P + W P A V D +
Sbjct: 118 DFSVLTVTCTVN--AFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPW 175
Query: 574 SGEYICRATNKWGTA 588
C N A
Sbjct: 176 HLPVTCVGKNDKEEA 190
Score = 73.9 bits (181), Expect = 9e-15
Identities = 25/227 (11%), Positives = 41/227 (18%), Gaps = 67/227 (29%)
Query: 934 AHFECRLT-PTNDPSMTVEWFHNGKA-------------LSAGSRIKTI----NDFGFVI 975
+ P + V WF G + +
Sbjct: 9 VTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFF 68
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLE 1035
L + + G Y C+ E T L+V
Sbjct: 69 LVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVK------------------------- 103
Query: 1036 EALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGR 1095
P + + P+ + C + + P + W
Sbjct: 104 -----------------PLTLSVHSER-SQFPDFSVLTVTCTVN--AFPHPHVQWLMPEG 143
Query: 1096 ----PFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
P A V D + C N A
Sbjct: 144 VEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 190
Score = 71.6 bits (175), Expect = 6e-14
Identities = 25/154 (16%), Positives = 38/154 (24%), Gaps = 14/154 (9%)
Query: 339 TMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
M + ++ P I L + I G Y CR + +L
Sbjct: 42 RMHHDVIFIEWPFRGFFDIHRSANTFF--LVVTAANISHDGNYLCRMKLGETEVTKQEHL 99
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG----KPIFH 454
V +P + H + + D CT+ P V+W P
Sbjct: 100 SVV-----KPLTLSVHSERSQ-FPDFSVLTVTCTVN--AFPHPHVQWLMPEGVEPAPTAA 151
Query: 455 KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
V D V + C N
Sbjct: 152 NGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKN 185
Score = 70.4 bits (172), Expect = 2e-13
Identities = 21/142 (14%), Positives = 40/142 (28%), Gaps = 36/142 (25%)
Query: 1759 LARFDAKISATKPLDVYWLKNGKKIIPDI-----------------RYKTLEEDNLFTLL 1801
L + ++S ++V W K G + + N F L+
Sbjct: 11 LTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLV 70
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPL 1861
+ A + G Y C E + L V + T++
Sbjct: 71 VTAANISHDGNYLCRMKLGETEVTKQEHLSVV-------------------KPLTLSVHS 111
Query: 1862 KDQNVKEGSAVTLKCRITGKPR 1883
+ + S +T+ C + P
Sbjct: 112 ERSQFPDFSVLTVTCTVNAFPH 133
Score = 64.7 bits (157), Expect = 2e-11
Identities = 24/215 (11%), Positives = 39/215 (18%), Gaps = 76/215 (35%)
Query: 7 PNLKIEWFKNGVP-------------LSLGSRIRSTF----DFGLVTLSINSLRADDSAI 49
P +++ WFK G + + R F L + +
Sbjct: 22 PEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGN 81
Query: 50 YTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSP 109
Y C+ E L + +P
Sbjct: 82 YLCRMKLGETEVTKQEHLSVV------------------------------KP------L 105
Query: 110 VFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG---- 165
H + + + C V P V+W
Sbjct: 106 TLSVHSERSQFPDFSVLTVTCTVN---------A----------FPHPHVQWLMPEGVEP 146
Query: 166 KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
P V D V + C
Sbjct: 147 APTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTC 181
Score = 64.3 bits (156), Expect = 2e-11
Identities = 19/171 (11%), Positives = 44/171 (25%), Gaps = 21/171 (12%)
Query: 1565 FVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITAT---------E 1615
F P ++V G +P + +V + +
Sbjct: 29 FKLGPGEEQVLIG-RMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMK 87
Query: 1616 TTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR 1675
E E + VV KP + + + + + P P ++W
Sbjct: 88 LGETEVTKQEHLSVV-------KPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLM 140
Query: 1676 ED----FPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 1722
+ P ++ + S+ + + + +N +A
Sbjct: 141 PEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 191
Score = 60.0 bits (145), Expect = 6e-10
Identities = 11/88 (12%), Positives = 20/88 (22%), Gaps = 6/88 (6%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL----SAGSRIKTINDFG 972
+ ++ C + P V+W +A + D
Sbjct: 105 LTLSVHSERSQFPDFSVLTVTCTVN--AFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGS 162
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEA 1000
+ + TC N EA
Sbjct: 163 LSVAVDLSLPKPWHLPVTCVGKNDKEEA 190
Score = 58.9 bits (142), Expect = 1e-09
Identities = 21/181 (11%), Positives = 33/181 (18%), Gaps = 60/181 (33%)
Query: 1441 QSTKFECQLAPV-GDPNMKVEWFLNGKPL-----------------PHKNRFNPIYDFGY 1482
+ V P ++V WF G P + F+
Sbjct: 7 ERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANT 66
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+ G YLCR + L
Sbjct: 67 FFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSV------------------------- 101
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHT 1602
+ E + + V +P P V WL+
Sbjct: 102 -----------------VKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGV 144
Query: 1603 I 1603
Sbjct: 145 E 145
Score = 58.1 bits (140), Expect = 2e-09
Identities = 23/185 (12%), Positives = 40/185 (21%), Gaps = 60/185 (32%)
Query: 722 GENAHFEARLT-PTDDPKLKVEWFWNGKPMKT-----------------GSRFRTFCDFG 763
GE + + P+++V WF G + F
Sbjct: 6 GERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSAN 65
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ---LPKGMEVFI- 819
L ++ G Y CR E + V ++ + S+ P + +
Sbjct: 66 TFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVT 125
Query: 820 --------------------------------------SFHEISPVYPEDCGQYSCRAYN 841
S + +C N
Sbjct: 126 CTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKN 185
Query: 842 DYGEA 846
D EA
Sbjct: 186 DKEEA 190
Score = 57.3 bits (138), Expect = 5e-09
Identities = 19/151 (12%), Positives = 35/151 (23%), Gaps = 18/151 (11%)
Query: 249 PAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYP 308
P F L + A G Y + + T L ++
Sbjct: 53 PFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKP-------L 105
Query: 309 LFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEFLYNG----KPIEASHRIRTVHA 362
S+ + + + + V++L P A+ +
Sbjct: 106 TLSVHSERSQ-FPDFSVLTVTCTVN----AFPHPHVQWLMPEGVEPAPTAANGGVMKEKD 160
Query: 363 FGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+ V L TC N +A
Sbjct: 161 GSLSVAVDLSLPKPWHLPVTCVGKNDKEEAH 191
Score = 56.6 bits (136), Expect = 7e-09
Identities = 19/185 (10%), Positives = 29/185 (15%), Gaps = 53/185 (28%)
Query: 613 PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQ 672
P + L + + G Y CR + L V
Sbjct: 53 PFRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKP-------- 104
Query: 673 LPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFE--AR 730
+V +
Sbjct: 105 ----------------------------------LTLSVHSERSQ-FPDFSVLTVTCTV- 128
Query: 731 LTPTDDPKLKVEWFWNG----KPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYN 786
P V+W P D + + +C N
Sbjct: 129 ---NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKN 185
Query: 787 DYGEA 791
D EA
Sbjct: 186 DKEEA 190
Score = 56.6 bits (136), Expect = 9e-09
Identities = 28/254 (11%), Positives = 50/254 (19%), Gaps = 74/254 (29%)
Query: 1274 VTVQEAEPVRFETRVE-PRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHP 1332
VT E V + + P + V F LI + P
Sbjct: 1 VTAFLGERVTLTSYWRRVSLGPEIEVSW-------FKLGPGEEQVLIGRMHHDVIFIEWP 53
Query: 1333 I-------FDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQV 1385
L + G Y+CR E + + V
Sbjct: 54 FRGFFDIHRSANTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHL------------SV 101
Query: 1386 PKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV-EMQSTK 1444
+P + ++ +
Sbjct: 102 ------------------------------------VKPLTLS--VHSERSQFPDFSVLT 123
Query: 1445 FECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP---IYDFGYVAMNFGW-VYPEDSGEYLC 1500
C + P+ V+W + P N G +++ + C
Sbjct: 124 VTCTV--NAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTC 181
Query: 1501 RATNLYGMDETRAI 1514
N E +
Sbjct: 182 VGKNDKE--EAHGV 193
Score = 52.3 bits (125), Expect = 3e-07
Identities = 20/182 (10%), Positives = 33/182 (18%), Gaps = 50/182 (27%)
Query: 521 KVHFDCRLEPKS-DPTMRIDWFFNGRP-------------FATGSRVKTVY----DFGFI 562
+V S P + + WF G + +
Sbjct: 8 RVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTF 67
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI-------------------------CK 597
L + G Y+CR + + C
Sbjct: 68 FLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCT 127
Query: 598 VL---TVIVEWFYNGKKLPH----GHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
V V+W P D + + L + C N
Sbjct: 128 VNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDK 187
Query: 651 GS 652
Sbjct: 188 EE 189
Score = 48.1 bits (114), Expect = 7e-06
Identities = 12/60 (20%), Positives = 17/60 (28%), Gaps = 4/60 (6%)
Query: 6 DPNLKIEWFKNG----VPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
P+ ++W P + + D L SL TC N EA
Sbjct: 131 FPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 190
Score = 46.6 bits (110), Expect = 2e-05
Identities = 23/186 (12%), Positives = 39/186 (20%), Gaps = 45/186 (24%)
Query: 144 KLLCTLTPVN-DPELKVEWFHNGKPIF-----------------HKNRVKMVSDFGFVVM 185
L V+ PE++V WF G + + +
Sbjct: 10 TLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFL 69
Query: 186 DIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLV--------- 236
+ G Y+C+ + K H L + + +
Sbjct: 70 VVTAANISHDGNYLCR--MKL---GETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTV 124
Query: 237 ---------PFTEWFVNNKPLPA----GAKFKTTHDFGYVALDIVGAYAEDSGIYTVKAT 283
P +W + PA D + T
Sbjct: 125 TCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGK 184
Query: 284 NSKGSA 289
N K A
Sbjct: 185 NDKEEA 190
Score = 38.5 bits (89), Expect = 0.011
Identities = 7/49 (14%), Positives = 16/49 (32%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEG 872
++ G Y CR E + V ++ + S+ + +
Sbjct: 71 VTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDF 119
Score = 37.7 bits (87), Expect = 0.018
Identities = 11/107 (10%), Positives = 19/107 (17%), Gaps = 23/107 (21%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFI--NISTAFL 1318
+P E + + V P P + +
Sbjct: 103 KPLTLSVHSERSQFPDFSVLTVTCTVNAFPH-----------------PHVQWLMPEGVE 145
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEA 1365
+ + D + C ND EA
Sbjct: 146 PAPTAANGGVMKEK--DGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 190
Score = 35.8 bits (82), Expect = 0.068
Identities = 14/96 (14%), Positives = 23/96 (23%), Gaps = 16/96 (16%)
Query: 1050 KPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDF 1109
P V +L + G++H D F PF +
Sbjct: 21 GPEIEVSWFKLGPGEEQVLIGRMHHDV--------------IFIEWPFRGFFDIHR--SA 64
Query: 1110 GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + G Y+CR + +
Sbjct: 65 NTFFLVVTAANISHDGNYLCRMKLGETEVTKQEHLS 100
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A
{Caenorhabditis elegans} PDB: 1koa_A
Length = 573
Score = 88.4 bits (219), Expect = 9e-18
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 902 GHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
+ D + P F+ P + E A+F CR+ ++ P V W + + L
Sbjct: 468 EYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPP--VVTWHKDDRELKQ 525
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + L IN V D G YT +A N +G L V
Sbjct: 526 SVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 83.7 bits (207), Expect = 2e-16
Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 6/164 (3%)
Query: 1672 KWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
W D QI + I + + + R +E
Sbjct: 412 PWLTPG--NAPGRDSQIPSSRYTKIRDSIKTKYDAWPE-PLPPLGRISNYSSLRKHRPQE 468
Query: 1732 KRQGGR---GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIR 1788
P F+ + GQ A F ++ A+ P V W K+ +++ ++
Sbjct: 469 YSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVK 528
Query: 1789 YKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
Y N + L I +D G Y A N+ G L V
Sbjct: 529 YMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 76.0 bits (187), Expect = 6e-14
Identities = 20/99 (20%), Positives = 33/99 (33%)
Query: 1631 DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
++ P F K E A F P + W ++D + S +
Sbjct: 474 AFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRY 533
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
L + +V +D G + V A+N G + L V
Sbjct: 534 NGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 74.1 bits (182), Expect = 2e-13
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+K + E P G ++ + R D Q P F V + + EG
Sbjct: 440 TKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQ-PRFIVKPYGTE-VGEG 497
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
++A+F R+ + P V W + + +K ++ + L I+ V +D G+Y+
Sbjct: 498 QSANFYCRVIASSPPV--VTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTV 555
Query: 783 RAYNDYGEAVTSASMKV 799
RA N YG + V
Sbjct: 556 RAKNSYGTKEEIVFLNV 572
Score = 71.8 bits (176), Expect = 1e-12
Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 1041 KDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG 1100
+ P F + +V E +F CR+ S P + W + R
Sbjct: 470 SIRDAFWDRSEAQPRFIVKPYG-TEVGEGQSANFYCRVIASSPPV--VTWHKDDRELKQS 526
Query: 1101 SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ Y+ L ++ V D GEY RA N +GT +
Sbjct: 527 VKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLN 571
Score = 67.2 bits (164), Expect = 3e-11
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+V E +F CR+ S P + W + R + Y+ L ++ V
Sbjct: 491 GTEVGEGQSANFYCRVIASSPPV--VTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGD 548
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
D GEY RA N +GT +
Sbjct: 549 DKGEYTVRAKNSYGTKEEIVFLN 571
Score = 66.4 bits (162), Expect = 6e-11
Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 11/159 (6%)
Query: 1368 KATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYL--------TEDDLYEP 1419
A +IP+ + K +A + + + ++ L + D +
Sbjct: 418 NAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWD 477
Query: 1420 EKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
+ PRF+ + ++ E QS F C++ P V W + + L ++ Y+
Sbjct: 478 RSEAQPRFIVKPY-GTEVGEGQSANFYCRVIASSPP--VVTWHKDDRELKQSVKYMKRYN 534
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTT 1518
+ V +D GEY RA N YG E L T
Sbjct: 535 GNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLNVT 573
Score = 63.3 bits (154), Expect = 5e-10
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
V + P + W K+ L + ++ L+IN ++ DD YT +A N G
Sbjct: 506 VIASSPP--VVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGT 563
Query: 61 AVSTCTLKI 69
L +
Sbjct: 564 KEEIVFLNV 572
Score = 62.5 bits (152), Expect = 9e-10
Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRV 458
+ P+F E + +G SA+F C + + P V W + + + +
Sbjct: 473 DAFWDRSEAQPRFIVKPYGTE-VGEGQSANFYCRVIASSPPV--VTWHKDDRELKQSVKY 529
Query: 459 KMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ + I V+ D GEY RA N++
Sbjct: 530 MKRYNGNDYGLTINRVKGDDKGEYTVRAKNSY 561
Score = 59.1 bits (143), Expect = 1e-08
Identities = 16/60 (26%), Positives = 25/60 (41%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W +++ L K+ ++ L I +D G YTV+A NS G+ L
Sbjct: 512 PVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFLN 571
Score = 58.3 bits (141), Expect = 2e-08
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 592 AKVICKVLTV---IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATN 648
A C+V+ +V W + ++L +Y ++ L I ++ G Y RA N
Sbjct: 500 ANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKN 559
Query: 649 KYGSDVTKASLK 660
YG+ L
Sbjct: 560 SYGTKEEIVFLN 571
Score = 58.3 bits (141), Expect = 2e-08
Identities = 18/109 (16%), Positives = 32/109 (29%), Gaps = 19/109 (17%)
Query: 93 KPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPV 152
+ +R + P FI E E ++ +F CRV
Sbjct: 467 QEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVI------------------- 507
Query: 153 NDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
V W + + + + + + I V+ D GEY +
Sbjct: 508 ASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVR 556
Score = 54.8 bits (132), Expect = 2e-07
Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 3/111 (2%)
Query: 288 SATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYN 347
+ P F ++ + EG+ A+F +I V + +
Sbjct: 463 KHRPQEYSIRDAFWDRSEAQPRFIVKPYGTE-VGEGQSANFYCRVI--ASSPPVVTWHKD 519
Query: 348 GKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
+ ++ S + + L I K +D G YT RA N +G E V L
Sbjct: 520 DRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNSYGTKEEIVFL 570
Score = 50.2 bits (120), Expect = 5e-06
Identities = 27/133 (20%), Positives = 42/133 (31%), Gaps = 22/133 (16%)
Query: 1242 KLKELEKNYTPEEIEED---EIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRV 1298
L K+ E D + E PRFI + V E + F RV P +
Sbjct: 457 NYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTW 516
Query: 1299 ECSLSTAFFFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRA 1358
+ S ++ ++ L I+ V +D+GEY RA
Sbjct: 517 HKDDRE------LKQSVKYMKR-------------YNGNDYGLTINRVKGDDKGEYTVRA 557
Query: 1359 YNDHGEAFTKATI 1371
N +G +
Sbjct: 558 KNSYGTKEEIVFL 570
Score = 47.9 bits (114), Expect = 3e-05
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 1527 SQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEA----PVFVSQPEAQKVQEGEPARF 1582
P+ + + +I + +H P++ + + P F+ +P +V EG+ A F
Sbjct: 443 DAWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANF 502
Query: 1583 CTRVTGYPRPRVMWLINGHTIVN 1605
RV P V W + +
Sbjct: 503 YCRVIASSPPVVTWHKDDRELKQ 525
Score = 42.9 bits (101), Expect = 0.001
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
I+ V +D G+Y+ RA N YG + V
Sbjct: 542 INRVKGDDKGEYTVRAKNSYGTKEEIVFLNV 572
Score = 35.2 bits (81), Expect = 0.26
Identities = 8/55 (14%), Positives = 14/55 (25%)
Query: 1828 AELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ K P + + + P V EG + CR+
Sbjct: 456 SNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGEGQSANFYCRVIASS 510
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK
receptor, receptor tyrosine kinase, 3D-domain swapping,
transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB:
1hcf_X
Length = 103
Score = 78.6 bits (194), Expect = 2e-17
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI-----NDFGFVILEINDVYLRDSGLYT 990
+ P ++WF+NG L+ I T + L++++ ++G YT
Sbjct: 21 IPFTVKGNPKP--ALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYT 78
Query: 991 CKATNKHGEATTSCKLTVKGRQGID 1015
A N++G+ G GID
Sbjct: 79 LIAKNEYGKDEKQISAHFMGWPGID 103
Score = 75.2 bits (185), Expect = 3e-16
Identities = 17/99 (17%), Positives = 29/99 (29%), Gaps = 8/99 (8%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK---- 1694
P T P G+P P ++WF + S T
Sbjct: 4 APTITFLESP---TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEY 60
Query: 1695 -SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L + ++G + +IA+N GK + +
Sbjct: 61 HGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGW 99
Score = 69.4 bits (170), Expect = 4e-14
Identities = 13/74 (17%), Positives = 26/74 (35%), Gaps = 5/74 (6%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-----TLSINSLRADDSAIYTCKATNLL 58
+ +P ++WF NG L+ I + L +++ ++ YT A N
Sbjct: 26 KGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEY 85
Query: 59 GEAVSTCTLKIEDR 72
G+ +
Sbjct: 86 GKDEKQISAHFMGW 99
Score = 67.5 bits (165), Expect = 1e-13
Identities = 13/100 (13%), Positives = 25/100 (25%), Gaps = 8/100 (8%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL-----EED 1795
P+ T + S + + W NG + T +
Sbjct: 3 FAPTI-TFLESPT--SDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTE 59
Query: 1796 NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
L + ++G Y +A N G+ +
Sbjct: 60 YHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGW 99
Score = 66.3 bits (162), Expect = 4e-13
Identities = 21/105 (20%), Positives = 29/105 (27%), Gaps = 11/105 (10%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
P + G+P ++WF NG L
Sbjct: 4 APTITFLESP----TSDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTNH 57
Query: 1484 AMNFGW-----VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGI 1523
G ++G+Y A N YG DE + G PGI
Sbjct: 58 TEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGI 102
Score = 60.5 bits (147), Expect = 5e-11
Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 5/72 (6%)
Query: 736 DPKLKVEWFWNGKPMKTGSRFRTF-----CDFGFVILEISPVYPEDCGQYSCRAYNDYGE 790
+PK ++WF+NG + T L++ + G Y+ A N+YG+
Sbjct: 28 NPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGK 87
Query: 791 AVTSASMKVQGK 802
S G
Sbjct: 88 DEKQISAHFMGW 99
Score = 58.2 bits (141), Expect = 3e-10
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 341 TVEFLYNGKPIEASHRIRT-----VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
+++ YNG + S I T H L++ + G YT A N++G+ E
Sbjct: 32 ALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQ 91
Query: 396 VNLECVDK 403
++ +
Sbjct: 92 ISAHFMGW 99
Score = 57.1 bits (138), Expect = 7e-10
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 13/106 (12%)
Query: 1053 PPVFTSQLQDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT-----V 1106
P T L+ P + ++ +P + WF+NG + T
Sbjct: 4 APTITF-----LESPTSDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTN 56
Query: 1107 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDI 1152
+ L +D ++G+Y A N++G + I
Sbjct: 57 HTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGI 102
Score = 55.1 bits (133), Expect = 3e-09
Identities = 14/86 (16%), Positives = 27/86 (31%), Gaps = 11/86 (12%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKM-----VS 462
P I LE T+ +P+ ++WF+NG + +
Sbjct: 4 APT----ITFLESPTSDHHWCIPFTVKG--NPKPALQWFYNGAILNESKYICTKIHVTNH 57
Query: 463 DFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ + ++G+Y A N
Sbjct: 58 TEYHGCLQLDNPTHMNNGDYTLIAKN 83
Score = 54.0 bits (130), Expect = 7e-09
Identities = 16/93 (17%), Positives = 33/93 (35%), Gaps = 8/93 (8%)
Query: 509 PSQDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT-----VYDFGFI 562
P+ L+ P + ++ +P + WF+NG + T +
Sbjct: 5 PTITFLESPTSDHHWCIPFTVK--GNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHG 62
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
L +D ++G+Y A N++G +
Sbjct: 63 CLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAH 95
Score = 53.2 bits (128), Expect = 2e-08
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Query: 603 VEWFYNGKKLPHGHRYRTF-----HDFGIVILDILYCYEENSGVYECRATNKYGSDVTKA 657
++WFYNG L T H L + N+G Y A N+YG D +
Sbjct: 33 LQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQI 92
Query: 658 SLK 660
S
Sbjct: 93 SAH 95
Score = 48.6 bits (116), Expect = 7e-07
Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 5/69 (7%)
Query: 237 PFTEWFVNNKPLPAGAKFKT-----THDFGYVALDIVGAYAEDSGIYTVKATNSKGSATT 291
P +WF N L T H + L + ++G YT+ A N G
Sbjct: 31 PALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEK 90
Query: 292 SGTLKCLER 300
+ +
Sbjct: 91 QISAHFMGW 99
Score = 44.7 bits (106), Expect = 1e-05
Identities = 11/97 (11%), Positives = 27/97 (27%), Gaps = 26/97 (26%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
I+ L + + V+ G +P+ ++WF+NG +
Sbjct: 4 APTITFLESPT--SDHHWCIPFTVK---------G----------NPKPALQWFYNGAIL 42
Query: 169 FHKNRVKM-----VSDFGFVVMDIAYVQSHDSGEYVC 200
+ + + ++G+Y
Sbjct: 43 NESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTL 79
Score = 41.3 bits (97), Expect = 2e-04
Identities = 13/67 (19%), Positives = 19/67 (28%), Gaps = 3/67 (4%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM 1619
AP + V G P+P + W NG + T
Sbjct: 2 HFAPTIT---FLESPTSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHT 58
Query: 1620 EHKGKIQ 1626
E+ G +Q
Sbjct: 59 EYHGCLQ 65
Score = 40.1 bits (94), Expect = 5e-04
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
L +D + G+Y A N++G+ + + P I
Sbjct: 63 CLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPGI 102
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin,
beta-sandwich, mceacam1A - immunoglobulin FO spike NTD -
galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus
musculus} PDB: 1l6z_A*
Length = 208
Score = 82.0 bits (202), Expect = 2e-17
Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 30/210 (14%)
Query: 1642 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED----------FPITSSPDFQIHTF 1691
T + P + E + V L W++ + F S+ +F +
Sbjct: 2 VTIEAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAY 61
Query: 1692 STKSI------LIMRQVFMEDSGVFAVIAENRGGK-AKCSANLVVEEKRQGGRGGVVPPS 1744
S + I L+ + + M+D GV+ + + + + + V +
Sbjct: 62 SGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQP---------VTQ 112
Query: 1745 FLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIE 1804
+++ + + ++ WL N + + R + ++ L I
Sbjct: 113 PFLQVTNTTVKELDSVTLTCLSNDIGA-NIQWLFNSQSLQLTERMTLSQNNS--ILRIDP 169
Query: 1805 AVVEDSGAYECVAMNNAGEARCE-AELVVQ 1833
ED+G Y+C N R +L +
Sbjct: 170 IKREDAGEYQCEISNPVSVRRSNSIKLDII 199
Score = 74.7 bits (183), Expect = 6e-15
Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 9/121 (7%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L ++D GVYT T+ + P +++ + DS
Sbjct: 73 LLFQMITMKDMGVYTLDMTD-ENYRRTQATVRFHVHQPVTQPFLQVTNTTVK---ELDSV 128
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
C ND ++W N + + R+ + + ++ I ++ D+GEY C
Sbjct: 129 TLTCL---SNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEIS 183
Query: 488 N 488
N
Sbjct: 184 N 184
Score = 66.6 bits (162), Expect = 3e-12
Identities = 27/187 (14%), Positives = 55/187 (29%), Gaps = 50/187 (26%)
Query: 614 HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQL 673
+ R + + ++ I ++ GVY T++
Sbjct: 61 YSGREIIYSNGSLLFQMI---TMKDMGVYTLDMTDENY---------------------- 95
Query: 674 PEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTP 733
+ + + Q TV +E ++
Sbjct: 96 -----------RRTQATVRFHVHQPVTQPFLQVTNTTV--------KELDSVTLTCL--- 133
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT 793
++D ++W +N + ++ R + IL I P+ ED G+Y C N
Sbjct: 134 SNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVR-R 190
Query: 794 SASMKVQ 800
S S+K+
Sbjct: 191 SNSIKLD 197
Score = 65.1 bits (158), Expect = 1e-11
Identities = 27/186 (14%), Positives = 47/186 (25%), Gaps = 31/186 (16%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIF-------------------HKNRVKMVSDF 464
++ P+ W+ + R + S+
Sbjct: 14 DNNVLLLVHNLPLALGA--FAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNG 71
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQ--DNLDVPEAGKV 522
+ + D G Y + + + P N V E V
Sbjct: 72 SLL---FQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSV 128
Query: 523 HFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRAT 582
C +D I W FN + R+ + L +D + D+GEY C +
Sbjct: 129 TLTCL---SNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEIS 183
Query: 583 NKWGTA 588
N
Sbjct: 184 NPVSVR 189
Score = 62.4 bits (151), Expect = 9e-11
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 11/129 (8%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L +D G+YT+ T+ + R V+ LQ + + + E +
Sbjct: 73 LLFQMITMKDMGVYTLDMTDENY-----RRTQATVRFHVHQPVTQPFLQVTN-TTVKELD 126
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 384
D +++L+N + ++ + R+ +L I K ED G Y C
Sbjct: 127 SVTLTCL---SNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCE 181
Query: 385 ATNKWGQAE 393
+N
Sbjct: 182 ISNPVSVRR 190
Score = 62.4 bits (151), Expect = 1e-10
Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
+ T+ T+ E C +ND ++W N ++L R+ + IL
Sbjct: 111 TQPFLQVTNTTVKELDSVTLTCL---SNDIGANIQWLFNSQSLQLTERMTLSQNNS--IL 165
Query: 977 EINDVYLRDSGLYTCKATNKHGEATT-SCKLTV 1008
I+ + D+G Y C+ +N + S KL +
Sbjct: 166 RIDPIKREDAGEYQCEISNPVSVRRSNSIKLDI 198
Score = 57.4 bits (138), Expect = 6e-09
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
D I+W N L L R+ + + L I+ ++ +D+ Y C+ +N + S
Sbjct: 136 DIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVRRS 191
Score = 54.3 bits (130), Expect = 6e-08
Identities = 32/233 (13%), Positives = 55/233 (23%), Gaps = 64/233 (27%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI------ 975
+AE P W+ + + +
Sbjct: 5 EAVPPQVAEDNNVLLLVHNLPLALG--AFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYS 62
Query: 976 ----------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFA 1025
L + ++D G+YT T+++ T + + QV+
Sbjct: 63 GREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVT---- 118
Query: 1026 NATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT 1085
N V E V C +D
Sbjct: 119 -------------------------------------NTTVKELDSVTLTCL---SNDIG 138
Query: 1086 MRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
I W FN + R+ + L +D + D+GEY C +N
Sbjct: 139 ANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCEISNPVSVR 189
Score = 53.5 bits (128), Expect = 9e-08
Identities = 25/190 (13%), Positives = 43/190 (22%), Gaps = 58/190 (30%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI------------- 766
E N P W+ R +
Sbjct: 12 AEDNNVLLLVHNLPLALGA--FAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYS 69
Query: 767 ---LEISPVYPEDCGQYSCRAYNDYGEA-----------------VTSASMKVQGKRSII 806
L + +D G Y+ ++ + + V+ S+
Sbjct: 70 NGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKELDSVT 129
Query: 807 LESQLPKGMEVFISFH---------------------EISPVYPEDCGQYSCRAYNDYGE 845
L + L + I + I P+ ED G+Y C N
Sbjct: 130 L-TCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSV 188
Query: 846 AVTSASMKVQ 855
S S+K+
Sbjct: 189 R-RSNSIKLD 197
Score = 53.5 bits (128), Expect = 1e-07
Identities = 20/166 (12%), Positives = 42/166 (25%), Gaps = 56/166 (33%)
Query: 36 TLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPK 95
+L + D +YT T+ +
Sbjct: 72 SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPV--------------------- 110
Query: 96 EVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDP 155
+ + KE ++V C ND
Sbjct: 111 -------------TQPFLQVTNTTVKELDSVTLTCLS--------------------NDI 137
Query: 156 ELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
++W N + + R+ + + ++ I ++ D+GEY C+
Sbjct: 138 GANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKREDAGEYQCE 181
Score = 53.5 bits (128), Expect = 1e-07
Identities = 26/176 (14%), Positives = 44/176 (25%), Gaps = 54/176 (30%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
SL + +D G Y +++ P Q QV
Sbjct: 72 SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVT------------- 118
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMK 1458
+ V E+ S C D
Sbjct: 119 -----------------------------------NTTVKELDSVTLTCL---SNDIGAN 140
Query: 1459 VEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
++W N + L R + + + ED+GEY C +N + + +I
Sbjct: 141 IQWLFNSQSLQLTERMTLSQNNSI--LRIDPIKREDAGEYQCEISNPVSVRRSNSI 194
Score = 51.2 bits (122), Expect = 5e-07
Identities = 34/198 (17%), Positives = 50/198 (25%), Gaps = 59/198 (29%)
Query: 507 PSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG---------------- 550
P Q V E V P W+
Sbjct: 6 AVPPQ----VAEDNNVLLLVHNLPL--ALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQ 59
Query: 551 --SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKV---------- 598
S + +Y G SL + +D G Y T+ T+A V V
Sbjct: 60 AYSGREIIYSNG--SLLFQMITMKDMGVYTLDMTD-ENYRRTQATVRFHVHQPVTQPFLQ 116
Query: 599 -------------LTVIVE-------WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEEN 638
LT + W +N + L R + IL I E+
Sbjct: 117 VTNTTVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNS--ILRIDPIKRED 174
Query: 639 SGVYECRATNKYGSDVTK 656
+G Y+C +N +
Sbjct: 175 AGEYQCEISNPVSVRRSN 192
Score = 48.9 bits (116), Expect = 4e-06
Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 37/192 (19%)
Query: 122 ENENVHFDCRVEPS--------KDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNR 173
E+ NV P K T I K + P ++ + + R
Sbjct: 13 EDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQA--------YSGR 64
Query: 174 VKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLK 233
+ S+ + + D G Y + A + +++
Sbjct: 65 EIIYSNGSLL---FQMITMKDMGVYTLDM-TDENYRRTQATVRFHVHQPVTQPFLQVTNT 120
Query: 234 TL-----VPFTE----------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIY 278
T+ V T W N++ L + + + L I ED+G Y
Sbjct: 121 TVKELDSVTLTCLSNDIGANIQWLFNSQSLQLTERMTLSQNNSI--LRIDPIKREDAGEY 178
Query: 279 TVKATNSKGSAT 290
+ +N
Sbjct: 179 QCEISNPVSVRR 190
Score = 40.0 bits (93), Expect = 0.003
Identities = 13/84 (15%), Positives = 20/84 (23%), Gaps = 17/84 (20%)
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
+LL ++D G Y + A
Sbjct: 72 SLLFQMITMKDMGVYTLDMTDENYRRTQ-----------------ATVRFHVHQPVTQPF 114
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKP 1882
+ + VKE +VTL C
Sbjct: 115 LQVTNTTVKELDSVTLTCLSNDIG 138
Score = 36.6 bits (84), Expect = 0.047
Identities = 12/114 (10%), Positives = 23/114 (20%), Gaps = 41/114 (35%)
Query: 1490 VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHT 1549
+ +D G Y T+
Sbjct: 78 ITMKDMGVYTLDMTDENYRRTQAT------------------------------------ 101
Query: 1550 PEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
V + Q V+E + T ++ + WL N ++
Sbjct: 102 ----VRFHVHQPVTQPFLQVTNTTVKELDSVTL-TCLSNDIGANIQWLFNSQSL 150
Score = 33.5 bits (76), Expect = 0.47
Identities = 16/118 (13%), Positives = 27/118 (22%), Gaps = 22/118 (18%)
Query: 1066 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG------------------SRVKTVY 1107
V E V P W+ S + +Y
Sbjct: 11 VAEDNNVLLLVHNLPL--ALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY 68
Query: 1108 DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAE 1165
G SL + +D G Y T++ + Q+ ++ E
Sbjct: 69 SNG--SLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTTVKE 124
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C,
C-protein, skeletal muscle fast-isoform, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 79.0 bits (195), Expect = 2e-17
Identities = 21/126 (16%), Positives = 32/126 (25%), Gaps = 13/126 (10%)
Query: 1717 RGGKAKCSANLVVEEKRQGGRGGVVPPSFL---TTISSAVINVGQLARFDAKISATKPLD 1773
G + + + E PP + + VG+
Sbjct: 3 SGSSGTLAQPVTIREI-------AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQ 55
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
V W K G + R D + +A DSG YE + + V
Sbjct: 56 VVWTKGGAPLDTS-RVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVV 114
Query: 1834 SKKAPG 1839
K G
Sbjct: 115 EK--AG 118
Score = 75.1 bits (185), Expect = 4e-16
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 3/80 (3%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKA 993
+ P V W G L SR+ + + DSG Y
Sbjct: 42 LNLVVPFQGK--PRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSV 98
Query: 994 TNKHGEATTSCKLTVKGRQG 1013
++ + T + ++ V + G
Sbjct: 99 QIENMKDTATIRIRVVEKAG 118
Score = 75.1 bits (185), Expect = 5e-16
Identities = 23/102 (22%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Query: 1634 EKPAKPPVFT---KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
+ A+PP Q +Q V F G P P + W + P+ +S + T
Sbjct: 16 REIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLDTS-RVHVRT 74
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
++ +RQ DSG + + + K + + V EK
Sbjct: 75 SDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEK 116
Score = 69.3 bits (170), Expect = 4e-14
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 1/68 (1%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P ++ W K G PL SR+ + DS Y + +T
Sbjct: 50 GKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTAT 108
Query: 65 CTLKIEDR 72
+++ ++
Sbjct: 109 IRIRVVEK 116
Score = 67.4 bits (165), Expect = 2e-13
Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 702 EHRQAPVFTVPLSNIDDL--REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTF 759
E + P +P + GE + P+ +V W G P+ T SR
Sbjct: 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGK--PRPQVVWTKGGAPLDT-SRVHVR 73
Query: 760 CDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
+ + D G+Y + + + ++V K
Sbjct: 74 TSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEK 116
Score = 60.1 bits (146), Expect = 7e-11
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 9/106 (8%)
Query: 385 ATNKWGQAEISVNLECVDKSKGQPPKFT--SHIKSLEGLKDGDSAHFECTLTPVNDPELK 442
++ G V + + +PPK H++ K G+ + P +
Sbjct: 2 SSGSSGTLAQPVTI----REIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQG--KPRPQ 55
Query: 443 VEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
V W G P+ +RV + + V + DSGEY
Sbjct: 56 VVWTKGGAPL-DTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQI 100
Score = 60.1 bits (146), Expect = 8e-11
Identities = 19/105 (18%), Positives = 29/105 (27%), Gaps = 5/105 (4%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEM--QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
E +PP+ + + + G P +V W G PL +R +
Sbjct: 17 EIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQ--GKPRPQVVWTKGGAPLD-TSRVHVR 73
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
DSGEY D ++ K G
Sbjct: 74 TSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKAG 118
Score = 58.2 bits (141), Expect = 4e-10
Identities = 18/92 (19%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 563
IRLP + +++ + K P ++ W G P T SRV
Sbjct: 24 IRLPRHLRQTYIRKVGEQLNLVVPFQGK--PRPQVVWTKGGAPLDT-SRVHVRTSDFDTV 80
Query: 564 LDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+ DSGEY + ++
Sbjct: 81 FFVRQAARSDSGEYELSVQIENMKDTATIRIR 112
Score = 58.2 bits (141), Expect = 4e-10
Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 5/100 (5%)
Query: 1048 EEKPNPPVFT--SQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
E PP L+ +++ + K P ++ W G P T SRV
Sbjct: 16 REIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGK--PRPQVVWTKGGAPLDT-SRVHV 72
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ DSGEY + ++
Sbjct: 73 RTSDFDTVFFVRQAARSDSGEYELSVQIENMKDTATIRIR 112
Score = 57.8 bits (140), Expect = 5e-10
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 15/126 (11%)
Query: 282 ATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLS--EGEIAHFEASLIPV-GDQ 338
++ S G+ T++ + P L GE + +P G
Sbjct: 2 SSGSSGTLAQPVTIREIAE------PPKIRLPRHLRQTYIRKVGEQLNLV---VPFQGKP 52
Query: 339 TMTVEFLYNGKPIEASH-RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
V + G P++ S +RT V + D+G Y + + ++
Sbjct: 53 RPQVVWTKGGAPLDTSRVHVRTSD--FDTVFFVRQAARSDSGEYELSVQIENMKDTATIR 110
Query: 398 LECVDK 403
+ V+K
Sbjct: 111 IRVVEK 116
Score = 50.9 bits (122), Expect = 2e-07
Identities = 15/64 (23%), Positives = 22/64 (34%), Gaps = 1/64 (1%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
P W PL T DF V + A DSG Y + T + ++
Sbjct: 54 PQVVWTKGGAPLDTSRVHVRTSDFDTV-FFVRQAARSDSGEYELSVQIENMKDTATIRIR 112
Query: 297 CLER 300
+E+
Sbjct: 113 VVEK 116
Score = 46.6 bits (111), Expect = 4e-06
Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 20/86 (23%)
Query: 116 NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVK 175
K E ++ + GK P +V W G P+ +RV
Sbjct: 32 QTYIRKVGEQLNLVVPFQ---------GK----------PRPQVVWTKGGAPL-DTSRVH 71
Query: 176 MVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+ + V + DSGEY
Sbjct: 72 VRTSDFDTVFFVRQAARSDSGEYELS 97
Score = 46.6 bits (111), Expect = 5e-06
Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 1549 TPEQLVEDEKPKEAPVFVSQPEAQK---VQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
T Q V + E P ++ + GE G PRP+V+W G +
Sbjct: 8 TLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPL 65
Score = 46.2 bits (110), Expect = 5e-06
Identities = 11/58 (18%), Positives = 18/58 (31%), Gaps = 1/58 (1%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
V W G L + DF + + +SG YE + D ++
Sbjct: 56 VVWTKGGAPLDTSRVHVRTSDFD-TVFFVRQAARSDSGEYELSVQIENMKDTATIRIR 112
Score = 36.2 bits (84), Expect = 0.018
Identities = 5/33 (15%), Positives = 9/33 (27%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+ D GEY ++ + I
Sbjct: 80 VFFVRQAARSDSGEYELSVQIENMKDTATIRIR 112
Score = 32.7 bits (75), Expect = 0.26
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 5/52 (9%)
Query: 1837 APGKQAPAPGAAVAQD--EAPTVAEPLKDQN---VKEGSAVTLKCRITGKPR 1883
+ G ++ E P + P + K G + L GKPR
Sbjct: 2 SSGSSGTLAQPVTIREIAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPR 53
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU
genomics, berkeley structural genomics center, BSGC, cell
A; 2.30A {Homo sapiens} PDB: 3qqn_A
Length = 137
Score = 78.9 bits (194), Expect = 4e-17
Identities = 19/135 (14%), Positives = 35/135 (25%), Gaps = 20/135 (14%)
Query: 903 HEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAG 962
H + F+ P C P ++W+ G+ +
Sbjct: 8 HHHSSGLVPRGSHMAGFVQAPLSQQRWVGGSVELHCEAV--GSPVPEIQWWFEGQGPNDI 65
Query: 963 SRI-------------KTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
T + + I+ + D+G Y C+A+N + VK
Sbjct: 66 CSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVK 125
Query: 1010 GRQGIDVEPQVSAIF 1024
V Q +
Sbjct: 126 W-----VRAQAVVLV 135
Score = 70.8 bits (173), Expect = 2e-14
Identities = 16/114 (14%), Positives = 33/114 (28%), Gaps = 13/114 (11%)
Query: 1633 SEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP-------- 1684
+ + F + + + E G P+P I+W+ E
Sbjct: 15 VPRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGAR 74
Query: 1685 -----DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKR 1733
+ S + + + ED+G + A N + + V+ R
Sbjct: 75 LDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVR 128
Score = 66.6 bits (162), Expect = 8e-13
Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 16/113 (14%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGK-------PMKTGSRFR 757
F + G + P +++W++ G+ + G+R
Sbjct: 20 HMAGFVQAPLSQQ-RWVGGSVELHCEAV--GSPVPEIQWWFEGQGPNDICSQLWDGARLD 76
Query: 758 ------TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
T+ + I + ED G Y CRA ND + + +V+ R+
Sbjct: 77 RVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRA 129
Score = 63.5 bits (154), Expect = 8e-12
Identities = 20/110 (18%), Positives = 33/110 (30%), Gaps = 13/110 (11%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIR------------- 1788
F+ S VG + + ++ W G+
Sbjct: 21 MAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHI 80
Query: 1789 YKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+ T + T+ I V ED+G YEC A N+ V+ +A
Sbjct: 81 HATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQ 130
Score = 58.9 bits (142), Expect = 4e-10
Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 16/114 (14%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGK-------PLPHK 1471
P FV +Q Q S + C+ VG P +++W+ G+ L
Sbjct: 16 PRGSHMAGFVQAPLSQ-QRWVGGSVELHCEA--VGSPVPEIQWWFEGQGPNDICSQLWDG 72
Query: 1472 NRFNPIYDFGYVAMNFGW------VYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
R + ++ + + ED+G Y CRA+N + +
Sbjct: 73 ARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKW 126
Score = 58.5 bits (141), Expect = 4e-10
Identities = 19/113 (16%), Positives = 29/113 (25%), Gaps = 16/113 (14%)
Query: 1048 EEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV---- 1103
+ F G V C P I W+F G+
Sbjct: 16 PRGSHMAGFVQAPLS-QQRWVGGSVELHCEAV--GSPVPEIQWWFEGQGPNDICSQLWDG 72
Query: 1104 ---------KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICK 1147
T + ++ +D + D+G Y CRA+N K
Sbjct: 73 ARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVK 125
Score = 56.6 bits (136), Expect = 3e-09
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 13/77 (16%)
Query: 6 DPNLKIEWFKNG-------VPLSLGSRIRSTFDFGLV------TLSINSLRADDSAIYTC 52
P +I+W+ G L G+R+ T+SI++L +D+ Y C
Sbjct: 48 SPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYEC 107
Query: 53 KATNLLGEAVSTCTLKI 69
+A+N T ++
Sbjct: 108 RASNDPDRNHLTRAPRV 124
Score = 56.2 bits (135), Expect = 3e-09
Identities = 13/65 (20%), Positives = 19/65 (29%)
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGH 1601
M +S H + FV P +Q+ G G P P + W G
Sbjct: 1 MGSSHHHHHHSSGLVPRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQ 60
Query: 1602 TIVNE 1606
+
Sbjct: 61 GPNDI 65
Score = 55.4 bits (133), Expect = 5e-09
Identities = 21/119 (17%), Positives = 29/119 (24%), Gaps = 10/119 (8%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE--PRVDPRLRVECSLSTAFFFPFINISTAFLI 1319
F+ S V P P ++ N + L
Sbjct: 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSPV--PEIQWWFEGQG------PNDICSQLW 70
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
L V ++ ID + ED G Y CRA ND K +
Sbjct: 71 DGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRA 129
Score = 51.2 bits (122), Expect = 2e-07
Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 16/96 (16%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK-------PIFHKNRV 458
F S + G S C P +++W+ G+ ++ R+
Sbjct: 19 SHMAGFVQAPLSQQRW-VGGSVELHCEAV--GSPVPEIQWWFEGQGPNDICSQLWDGARL 75
Query: 459 KMVSDFGFVVMD------IAYVQSHDSGEYVCRAWN 488
V I + D+G Y CRA N
Sbjct: 76 DRVHIHATYHQHAASTISIDTLVEEDTGTYECRASN 111
Score = 50.4 bits (120), Expect = 4e-07
Identities = 15/63 (23%), Positives = 24/63 (38%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
L++G ++ H T H + I EDTG Y CRA+N + ++
Sbjct: 60 QGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLT 119
Query: 396 VNL 398
Sbjct: 120 RAP 122
Score = 49.2 bits (117), Expect = 9e-07
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 19/108 (17%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV-------------KTVYDF 559
+ G V C P I W+F G+ T +
Sbjct: 30 SQQRWVGGSVELHCEAV--GSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQH 87
Query: 560 GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVL----TVIV 603
++ +D + D+G Y CRA+N K + V+V
Sbjct: 88 AASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLV 135
Score = 46.2 bits (109), Expect = 9e-06
Identities = 14/109 (12%), Positives = 27/109 (24%), Gaps = 32/109 (29%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
F+ + +V C G P +++W+
Sbjct: 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAV---------G----------SPVPEIQWWFE 58
Query: 165 GK-------PIFHKNRVKMVSDFGFVVMD------IAYVQSHDSGEYVC 200
G+ ++ R+ V I + D+G Y C
Sbjct: 59 GQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYEC 107
Score = 44.6 bits (105), Expect = 3e-05
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
Query: 603 VEWFYNGKKLP-------------HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNK 649
++W++ G+ H + T+H + I EE++G YECRA+N
Sbjct: 53 IQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASND 112
Query: 650 YGSDVTKASLK 660
+ + +
Sbjct: 113 PDRNHLTRAPR 123
Score = 42.7 bits (100), Expect = 2e-04
Identities = 10/64 (15%), Positives = 18/64 (28%)
Query: 233 KTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
+ + L T H + I ED+G Y +A+N +
Sbjct: 60 QGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLT 119
Query: 293 GTLK 296
+
Sbjct: 120 RAPR 123
Score = 41.5 bits (97), Expect = 3e-04
Identities = 8/38 (21%), Positives = 10/38 (26%)
Query: 1846 GAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
G + Q G +V L C G P
Sbjct: 13 GLVPRGSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPV 50
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
b.1.1.4
Length = 126
Score = 78.1 bits (192), Expect = 5e-17
Identities = 23/119 (19%), Positives = 36/119 (30%), Gaps = 16/119 (13%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKAL---SAGSRIKTIND 970
F+ P T+ F ++ T++WF AG ++
Sbjct: 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRK-PTIKWFKGKWMDLASKAGKHLQLKET 65
Query: 971 F------GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQG----IDVEPQ 1019
F ++I +G Y C+ T K + S L V G ID P
Sbjct: 66 FERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNIDSGPS 124
Score = 77.3 bits (190), Expect = 1e-16
Identities = 25/124 (20%), Positives = 38/124 (30%), Gaps = 14/124 (11%)
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKISA----TKPLDVYWLKN---------GKK 1782
G G F+ + VG+ F AK+ A KP + W K GK
Sbjct: 1 GSSGSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKP-TIKWFKGKWMDLASKAGKH 59
Query: 1783 IIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQA 1842
+ ++ F + II+A +G Y C C +L V
Sbjct: 60 LQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGTTPNI 119
Query: 1843 PAPG 1846
+
Sbjct: 120 DSGP 123
Score = 73.1 bits (179), Expect = 3e-15
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 12/110 (10%)
Query: 1637 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDF---------PITSSP 1684
+ +F +K Q + F + + L PTIKWF+ + +
Sbjct: 5 SSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKE 64
Query: 1685 DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 1734
F+ H+ + + + +G + + CS +L V E
Sbjct: 65 TFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTG 114
Score = 62.7 bits (152), Expect = 1e-11
Identities = 17/116 (14%), Positives = 30/116 (25%), Gaps = 15/116 (12%)
Query: 702 EHRQAPVFTVPLSNIDDLREGENAHFEARLT---PTDDPKLKVEWF---WNGKPMKTGSR 755
+F ++ GE+ F A++ P ++WF W K G
Sbjct: 3 SGSSGILFIEKPQGGT-VKVGEDITFIAKVKAEDLLRKPT--IKWFKGKWMDLASKAGKH 59
Query: 756 FR------TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
+ ++I G Y C S ++V
Sbjct: 60 LQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGT 115
Score = 52.7 bits (126), Expect = 4e-08
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG 406
GK ++ ++I+ K G Y C T K S +LE V +S G
Sbjct: 56 AGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLE-VHESTG 114
Query: 407 QPPKFTS 413
P S
Sbjct: 115 TTPNIDS 121
Score = 50.0 bits (119), Expect = 4e-07
Identities = 12/72 (16%), Positives = 22/72 (30%), Gaps = 9/72 (12%)
Query: 10 KIEWFKN---------GVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
I+WFK G L L + I + + + Y C+ T
Sbjct: 41 TIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKF 100
Query: 61 AVSTCTLKIEDR 72
+ L++ +
Sbjct: 101 DSCSFDLEVHES 112
Score = 48.8 bits (116), Expect = 8e-07
Identities = 17/117 (14%), Positives = 30/117 (25%), Gaps = 15/117 (12%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNM---KVEWF---------LNGK 1466
F+ + + + + F ++ + + ++WF GK
Sbjct: 2 SSGSSGILFIEKPQGG-TVKVGEDITFIAKVK--AEDLLRKPTIKWFKGKWMDLASKAGK 58
Query: 1467 PLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGI 1523
L K F M +G Y C T D L+ G
Sbjct: 59 HLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTGT 115
Score = 48.8 bits (116), Expect = 8e-07
Identities = 15/104 (14%), Positives = 27/104 (25%), Gaps = 15/104 (14%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLE---PKSDPTMRIDWFFN---------GRPFATG 1100
+F + Q V + F +++ PT I WF G+
Sbjct: 7 GILFIEKPQG-GTVKVGEDITFIAKVKAEDLLRKPT--IKWFKGKWMDLASKAGKHLQLK 63
Query: 1101 SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ + + +G Y C T K +
Sbjct: 64 ETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDL 107
Score = 47.7 bits (113), Expect = 2e-06
Identities = 13/116 (11%), Positives = 28/116 (24%), Gaps = 19/116 (16%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE---PRVDPR---LRVECSLSTAFFFPFINIST 1315
FI + + TV+ E + F +V+ P + + + + +
Sbjct: 5 SSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKE 64
Query: 1316 AFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
F + + + I G Y C +
Sbjct: 65 TFERHS-------------RVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDL 107
Score = 45.4 bits (107), Expect = 1e-05
Identities = 9/39 (23%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYP---RPRVMWL 1597
+F+ +P+ V+ GE F +V +P + W
Sbjct: 7 GILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWF 45
Score = 45.0 bits (106), Expect = 2e-05
Identities = 20/112 (17%), Positives = 33/112 (29%), Gaps = 31/112 (27%)
Query: 107 DSPVFISHLNDVECKENENVHFDCRVE--PSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
+FI K E++ F +V+ P ++WF
Sbjct: 6 SGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRK----------------PT--IKWFKG 47
Query: 165 ---------GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK 207
GK + K + S M I + + +G Y C+ V K
Sbjct: 48 KWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCE--VTYK 97
Score = 44.6 bits (105), Expect = 2e-05
Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 16/100 (16%)
Query: 404 SKGQP-PKFTSHIKSLEGLKDGDSAHFECTLT---PVNDPELKVEWFHN---------GK 450
S G F + +K G+ F + + P ++WF GK
Sbjct: 2 SSGSSGILFIEKPQGGT-VKVGEDITFIAKVKAEDLLRKPT--IKWFKGKWMDLASKAGK 58
Query: 451 PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ K + S M I + + +G Y C
Sbjct: 59 HLQLKETFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKD 98
Score = 43.4 bits (102), Expect = 7e-05
Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 15/84 (17%)
Query: 592 AKVICKV------LTVIVEWF---------YNGKKLPHGHRYRTFHDFGIVILDILYCYE 636
I KV ++WF GK L + + I+ +
Sbjct: 25 ITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKD 84
Query: 637 ENSGVYECRATNKYGSDVTKASLK 660
+G Y C T K D L+
Sbjct: 85 NFAGNYRCEVTYKDKFDSCSFDLE 108
Score = 42.7 bits (100), Expect = 1e-04
Identities = 15/104 (14%), Positives = 24/104 (23%), Gaps = 19/104 (18%)
Query: 513 NLDVPEAGKVHFDCRLE---PKSDPTMRIDWFFN---------GRPFATGSRVKTVYDFG 560
V + F +++ PT I WF G+ +
Sbjct: 16 GGTVKVGEDITFIAKVKAEDLLRKPT--IKWFKGKWMDLASKAGKHLQLKETFERHSRVY 73
Query: 561 FISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
+ + +G Y C T K L V
Sbjct: 74 TFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFD-----LEVHES 112
Score = 39.2 bits (91), Expect = 0.002
Identities = 8/44 (18%), Positives = 15/44 (34%)
Query: 253 KFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
F+ + I+ A +G Y + T + S L+
Sbjct: 65 TFERHSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLE 108
Score = 38.8 bits (90), Expect = 0.003
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 1850 AQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ E + VK G +T ++ +
Sbjct: 3 SGSSGILFIEKPQGGTVKVGEDITFIAKVKAED 35
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor
tyrosine kinase, 3D-domain swapping, transferase; 1.90A
{Homo sapiens} SCOP: b.1.1.4
Length = 118
Score = 77.2 bits (190), Expect = 8e-17
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI-- 1696
PP +P E E G+P PT+ W P+ S + + I
Sbjct: 8 PPRVVSLEEPELRLE---HCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISE 64
Query: 1697 --LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
L+ + ++G + +IA+N G A + N ++
Sbjct: 65 GCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKE 102
Score = 75.6 bits (186), Expect = 3e-16
Identities = 23/107 (21%), Positives = 34/107 (31%), Gaps = 9/107 (8%)
Query: 923 PTDLTLAESTLAH---FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTI----NDFGFVI 975
P ++L E L E + +P T+ W HNG+ L I +
Sbjct: 9 PRVVSLEEPELRLEHCIEFVVR--GNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGC 66
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSA 1022
L N ++G YT A N G A + E +
Sbjct: 67 LLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVSPTP 113
Score = 69.8 bits (171), Expect = 3e-14
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 7/102 (6%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL--- 1797
PP ++ + + + P ++WL NG+ +
Sbjct: 7 YPPRVVSLEEP---ELRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEIS 63
Query: 1798 -FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
LL + ++G Y +A N G A + P
Sbjct: 64 EGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFP 105
Score = 66.8 bits (163), Expect = 4e-13
Identities = 18/73 (24%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTF----DFGLVTLSINSLRADDSAIYTCKATNLLG 59
R +P + W NG PL I + + L N ++ YT A N LG
Sbjct: 30 RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLG 89
Query: 60 EAVSTCTLKIEDR 72
A T
Sbjct: 90 TANQTINGHFLKE 102
Score = 64.8 bits (158), Expect = 2e-12
Identities = 21/109 (19%), Positives = 32/109 (29%), Gaps = 10/109 (9%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYV 1483
PPR V+ + E + G+P + W NG+PL + Y
Sbjct: 8 PPRVVSLEEP----ELRLEHCIEFVV--RGNPPPTLHWLHNGQPLRESKIIHVEYYQEGE 61
Query: 1484 AMN----FGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQ 1528
F ++G Y A N G +P + E
Sbjct: 62 ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVDEVS 110
Score = 64.1 bits (156), Expect = 4e-12
Identities = 14/101 (13%), Positives = 27/101 (26%), Gaps = 10/101 (9%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTF----CD 761
P E + +P + W NG+P++ +
Sbjct: 8 PPRVVSLEEPE----LRLEHCIEFVVRG--NPPPTLHWLHNGQPLRESKIIHVEYYQEGE 61
Query: 762 FGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L + + G Y+ A N G A + + +
Sbjct: 62 ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKE 102
Score = 60.6 bits (147), Expect = 6e-11
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 4/73 (5%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVV----LEILGTKIEDTGVYTCRATNKWGQAEISV 396
T+ +L+NG+P+ S I + + L + G YT A N G A ++
Sbjct: 36 TLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTI 95
Query: 397 NLECVDKSKGQPP 409
N + +
Sbjct: 96 NGHFLKEPFPVDE 108
Score = 60.2 bits (146), Expect = 7e-11
Identities = 19/97 (19%), Positives = 30/97 (30%), Gaps = 10/97 (10%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY----D 1108
PP S + L + + + PT + W NG+P + Y +
Sbjct: 8 PPRVVSLEEPELRLE----HCIEFVVRGNPPPT--LHWLHNGQPLRESKIIHVEYYQEGE 61
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + ++G Y A N GTA
Sbjct: 62 ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGH 98
Score = 56.7 bits (137), Expect = 1e-09
Identities = 18/106 (16%), Positives = 33/106 (31%), Gaps = 20/106 (18%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
PP+ S + L E + +P + W HNG+P+ + +
Sbjct: 8 PPRVVSLEEPELRL----EHCIEFVVR--GNPPPTLHWLHNGQPLRESKIIHVEYYQEGE 61
Query: 468 VMD----IAYVQSHDSGEYVCRAWNNF----------IFIPPFPIF 499
+ + +++G Y A N PFP+
Sbjct: 62 ISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFPVD 107
Score = 56.0 bits (135), Expect = 2e-09
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 6/78 (7%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY----DFGFISLDMDYVYARDSGEY 577
+ + PT + W NG+P + Y + L + ++G Y
Sbjct: 23 HCIEFVVRGNPPPT--LHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNY 80
Query: 578 ICRATNKWGTAMTKAKVI 595
A N GTA
Sbjct: 81 TLIAKNPLGTANQTINGH 98
Score = 51.7 bits (124), Expect = 7e-08
Identities = 12/62 (19%), Positives = 19/62 (30%), Gaps = 4/62 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVI----LDILYCYEENSGVYECRATNKYGSDVTKAS 658
+ W +NG+ L + I L N+G Y A N G+ +
Sbjct: 37 LHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTIN 96
Query: 659 LK 660
Sbjct: 97 GH 98
Score = 48.7 bits (116), Expect = 8e-07
Identities = 14/68 (20%), Positives = 22/68 (32%), Gaps = 4/68 (5%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVA----LDIVGAYAEDSGIYTVKATNSKGSATTS 292
P W N +PL + L ++G YT+ A N G+A +
Sbjct: 35 PTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQT 94
Query: 293 GTLKCLER 300
L+
Sbjct: 95 INGHFLKE 102
Score = 43.7 bits (103), Expect = 5e-05
Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 26/96 (27%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P +S + V G +P + W HNG+P+
Sbjct: 9 PRVVSLEEPEL---RLEHCIEFVVR---------G----------NPPPTLHWLHNGQPL 46
Query: 169 FHKNRVKMVSDFGFVVMD----IAYVQSHDSGEYVC 200
+ + + + +++G Y
Sbjct: 47 RESKIIHVEYYQEGEISEGCLLFNKPTHYNNGNYTL 82
Score = 41.0 bits (96), Expect = 4e-04
Identities = 6/35 (17%), Positives = 12/35 (34%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+ + G Y+ A N G A + + +
Sbjct: 68 LFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKE 102
Score = 39.8 bits (93), Expect = 9e-04
Identities = 14/62 (22%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Query: 1560 KEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM 1619
P VS E + E V G P P + WL NG + + + + E+
Sbjct: 6 YYPPRVVSLEEPELRLE---HCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEI 62
Query: 1620 EH 1621
Sbjct: 63 SE 64
Score = 39.0 bits (91), Expect = 0.002
Identities = 9/45 (20%), Positives = 13/45 (28%)
Query: 1335 DLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
++ L + + G Y A N G A K P
Sbjct: 61 EISEGCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKEPFP 105
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor,
CD32, immunoglobulin superfamily, low responder
polymorphism, cell membrane; HET: NAG; 1.50A {Homo
sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C*
2fcb_A
Length = 170
Score = 76.0 bits (187), Expect = 9e-16
Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 24/181 (13%)
Query: 408 PPKFTSHIKSLEG-LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
PPK ++ + DS C + + ++WFHNG I +
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNLIPTHTQP-------- 52
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDC 526
++DSGEY C+ + P +F + L +P + E + C
Sbjct: 53 --SYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLE---FQEGETIMLRC 107
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWG 586
K P +++ +F NG+ T + SG+Y C +
Sbjct: 108 HS-WKDKPLVKVTFFQNGKSQKFSHLDPT--------FSIPQANHSHSGDYHCTGNIGYT 158
Query: 587 T 587
Sbjct: 159 L 159
Score = 68.3 bits (167), Expect = 5e-13
Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 28/151 (18%)
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
++ ++++ +NG I + D+G YTC+ + +
Sbjct: 33 ESDSIQWFHNGNLIPTHTQP----------SYRFKANNNDSGEYTCQTGQTSLSDPVHLT 82
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNR 457
+ LE ++G++ C + + P +KV +F NGK +
Sbjct: 83 V--------LFEWLVLQTPHLE-FQEGETIMLRCH-SWKDKPLVKVTFFQNGKSQKFSHL 132
Query: 458 VKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
S I SG+Y C
Sbjct: 133 DPTFS--------IPQANHSHSGDYHCTGNI 155
Score = 64.1 bits (156), Expect = 1e-11
Identities = 34/198 (17%), Positives = 49/198 (24%), Gaps = 66/198 (33%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
++WF+NG +P + +SG Y C+ SD
Sbjct: 37 IQWFHNGNLIPTHTQP----------SYRFKANNNDSGEYTCQTGQTSLSD--------- 77
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
HL + V P +EG
Sbjct: 78 ---------------------------PVHL-------TVLFEWLVLQTPHLEF---QEG 100
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
E + D P +KV +F NGK K T I G Y C
Sbjct: 101 ETIMLRCH-SWKDKPLVKVTFFQNGKSQKFSHLDPT--------FSIPQANHSHSGDYHC 151
Query: 783 RAYNDYGEAVTSASMKVQ 800
Y +S + +
Sbjct: 152 TGNIGYTL-FSSKPVTIT 168
Score = 63.3 bits (154), Expect = 2e-11
Identities = 33/200 (16%), Positives = 49/200 (24%), Gaps = 36/200 (18%)
Query: 1639 PPVFTKKIQP--CRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKS 1695
PP K++P ++D + P +I+WF I +
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHT----------Q 51
Query: 1696 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 1755
+ DSG + +L V L T
Sbjct: 52 PSYRFKANNNDSGEYTCQTGQTSLSD--PVHLTVL----------FEWLVLQT-PHLEFQ 98
Query: 1756 VGQLARFDAKISATKPLDVY-WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYE 1814
G+ KPL + +NGK T I +A SG Y
Sbjct: 99 EGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTF--------SIPQANHSHSGDYH 150
Query: 1815 CVAMNNAGEAR-CEAELVVQ 1833
C + VQ
Sbjct: 151 CTGNIGYTLFSSKPVTITVQ 170
Score = 61.8 bits (150), Expect = 9e-11
Identities = 29/221 (13%), Positives = 53/221 (23%), Gaps = 66/221 (29%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
P + + + C+ + + +++WFHNG + ++
Sbjct: 5 AVLKLEPPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNLIPTHTQP----------S 53
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
DSG YTC+ + LTV
Sbjct: 54 YRFKANNNDSGEYTCQTGQ--TSLSDPVHLTVLFE------------------------- 86
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 1096
+ F E + C K P +++ +F NG+
Sbjct: 87 ---------WLVLQTPHLEFQ----------EGETIMLRCHS-WKDKPLVKVTFFQNGKS 126
Query: 1097 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 1137
T + SG+Y C +
Sbjct: 127 QKFSHLDPT--------FSIPQANHSHSGDYHCTGNIGYTL 159
Score = 59.8 bits (145), Expect = 4e-10
Identities = 34/185 (18%), Positives = 47/185 (25%), Gaps = 53/185 (28%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
PP + P V + V C+ + I WF NG T ++
Sbjct: 2 PPKAVLKLE----PPWIN----VLQEDSVTLTCQGARSPESD-SIQWFHNGNLIPTHTQ- 51
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI----------- 602
DSGEY C+ + V+ + L +
Sbjct: 52 ---------PSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGET 102
Query: 603 ---------------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
V +F NGK H TF I +SG Y C
Sbjct: 103 IMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPTFS-----IPQAN---HSHSGDYHCTGN 154
Query: 648 NKYGS 652
Y
Sbjct: 155 IGYTL 159
Score = 57.5 bits (139), Expect = 2e-09
Identities = 19/94 (20%), Positives = 28/94 (29%), Gaps = 11/94 (11%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
L TP E C + + P + V +F NGK+ T
Sbjct: 87 WLVLQTPHL-EFQEGETIMLRCH-SWKDKPLVKVTFFQNGKSQKFSHLDPT--------F 136
Query: 977 EINDVYLRDSGLYTCKATNKHGEAT-TSCKLTVK 1009
I SG Y C + + +TV+
Sbjct: 137 SIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170
Score = 57.5 bits (139), Expect = 3e-09
Identities = 29/153 (18%), Positives = 40/153 (26%), Gaps = 30/153 (19%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
+WF N +P + A DSG YT + + S
Sbjct: 37 IQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQTSLSDPVH------ 80
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+ + LQ H EGE + V F NGK + SH
Sbjct: 81 ----LTVLFEWLVLQTPH-LEFQEGETIMLRCH-SWKDKPLVKVTFFQNGKSQKFSHLDP 134
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 391
T I +G Y C +
Sbjct: 135 T--------FSIPQANHSHSGDYHCTGNIGYTL 159
Score = 54.1 bits (130), Expect = 3e-08
Identities = 22/179 (12%), Positives = 46/179 (25%), Gaps = 41/179 (22%)
Query: 706 APVFTVPLSNIDD-LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
P + L + + ++ + + + ++WF NG + T ++
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNLIPTHTQ--------- 51
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEA-----VTSASMKVQGKRSIILESQ--------L 811
D G+Y+C+ V + +Q E +
Sbjct: 52 -PSYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSW 110
Query: 812 PKGMEVFISFH---------------EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
V ++F I G Y C Y +S + +
Sbjct: 111 KDKPLVKVTFFQNGKSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTL-FSSKPVTIT 168
Score = 54.1 bits (130), Expect = 3e-08
Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 58/182 (31%)
Query: 1424 PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PP+ V +++ V + S CQ + ++WF NG +P + + +
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQ-GARSPESDSIQWFHNGNLIPTHTQPSYRFK--- 57
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
DSGEY C+
Sbjct: 58 -------ANNNDSGEYTCQTGQ-------------------------------------- 72
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGH 1601
+ P L + V Q + QEGE C P +V + NG
Sbjct: 73 --TSLSDPVHLTVLFEW-----LVLQTPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGK 125
Query: 1602 TI 1603
+
Sbjct: 126 SQ 127
Score = 54.1 bits (130), Expect = 3e-08
Identities = 30/194 (15%), Positives = 49/194 (25%), Gaps = 75/194 (38%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+ I+WF NG + ++ +DS YTC+
Sbjct: 33 ESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQ---------- 72
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ D + L V + + +E +E E +
Sbjct: 73 ------------TSLSDPVHLT----------------VLFEWLVLQT-PHLEFQEGETI 103
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
C + P +KV +F NGK + S
Sbjct: 104 MLRCHSWK------------------DKPLVKVTFFQNGKSQKFSHLDPTFS-------- 137
Query: 187 IAYVQSHDSGEYVC 200
I SG+Y C
Sbjct: 138 IPQANHSHSGDYHC 151
Score = 50.6 bits (121), Expect = 5e-07
Identities = 29/193 (15%), Positives = 45/193 (23%), Gaps = 47/193 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V + + ++V C+ S ++WFHNG I
Sbjct: 5 AVLKLEPPWINVLQEDSVTLTCQGARSP------------------ESDSIQWFHNGNLI 46
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWF-----------VNNKPLPAGAKFKT 217
+ ++DSGEY CQ V + L
Sbjct: 47 PTHTQP----------SYRFKANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLE 96
Query: 218 THDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
+ + L + +F N K T I A SG
Sbjct: 97 FQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKFSHLDPT--------FSIPQANHSHSGD 148
Query: 278 YTVKATNSKGSAT 290
Y +
Sbjct: 149 YHCTGNIGYTLFS 161
Score = 48.3 bits (115), Expect = 4e-06
Identities = 27/168 (16%), Positives = 44/168 (26%), Gaps = 61/168 (36%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
D GEY C+ ++S
Sbjct: 52 PSYRFKANNNDSGEYTCQTGQ--------TSLS--------------------------- 76
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
++LT L+E Q P + E ++ C + P +KV
Sbjct: 77 -------DPVHLTV--LFEWLVLQTP--------HLEFQEGETIMLRCH-SWKDKPLVKV 118
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYG 1507
+F NGK + +P + + SG+Y C Y
Sbjct: 119 TFFQNGKSQKFSHL-DPTF-------SIPQANHSHSGDYHCTGNIGYT 158
Score = 47.9 bits (114), Expect = 4e-06
Identities = 22/170 (12%), Positives = 39/170 (22%), Gaps = 21/170 (12%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATET 1616
PK V +P V + + C + P + W NG+ I + +
Sbjct: 3 PK--AVLKLEPPWINVLQEDSVTLTC-QGARSPESDSIQWFHNGNLIPTH--TQPSYRFK 57
Query: 1617 TEMEHKGKIQERVVDASEKPA-----KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLPT 1670
G+ + S + E + D PL
Sbjct: 58 ANNNDSGEYTCQTGQTSLSDPVHLTVLFEWLVLQTPHLEFQEGETIMLRCHSWKDKPLVK 117
Query: 1671 IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+ +F+ S + Q SG +
Sbjct: 118 VTFFQNGKSQKFS--------HLDPTFSIPQANHSHSGDYHCTGNIGYTL 159
Score = 47.9 bits (114), Expect = 5e-06
Identities = 17/116 (14%), Positives = 28/116 (24%), Gaps = 32/116 (27%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + + W NG I + +A DSG Y C +
Sbjct: 30 RSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQTSLSD-- 77
Query: 1827 EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
L V + V + +EG + L+C
Sbjct: 78 PVHLTVLFE-------------------WLVLQT-PHLEFQEGETIMLRCHSWKDK 113
Score = 47.1 bits (112), Expect = 7e-06
Identities = 12/57 (21%), Positives = 16/57 (28%), Gaps = 8/57 (14%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
P +K+ +F+NG T SI S Y C S
Sbjct: 114 PLVKVTFFQNGKSQKFSHLDP--------TFSIPQANHSHSGDYHCTGNIGYTLFSS 162
Score = 42.5 bits (100), Expect = 3e-04
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 12/82 (14%)
Query: 1053 PPVFTSQLQ-DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 1111
PP +L+ ++V + V C+ + I WF NG T ++
Sbjct: 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESD-SIQWFHNGNLIPTHTQ--------- 51
Query: 1112 ISLDMDYVYARDSGEYICRATN 1133
DSGEY C+
Sbjct: 52 -PSYRFKANNNDSGEYTCQTGQ 72
Score = 33.6 bits (77), Expect = 0.31
Identities = 4/25 (16%), Positives = 7/25 (28%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGE 1364
+ I G+Y C +
Sbjct: 135 TFSIPQANHSHSGDYHCTGNIGYTL 159
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like
protein 3, nephrin- like 2, structural genomics, NPPSFA;
NMR {Homo sapiens} SCOP: b.1.1.1
Length = 122
Score = 74.2 bits (182), Expect = 1e-15
Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 22/136 (16%)
Query: 1719 GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWL 1777
G + S L V PP ++ + G+ + I +T P + W
Sbjct: 1 GSSGSSGTLTVN----------GPPII-SSTQTQHALHGEKGQIKCFIRSTPPPDRIAWS 49
Query: 1778 KNGKKIIPD------IRYKTLEEDNLFTLLIIEAVVED-SGAYECVAMNNAGEARCEAEL 1830
+ + + EE + TL I V D Y C A N+ G L
Sbjct: 50 WKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRL 109
Query: 1831 VVQSKKAPGKQAPAPG 1846
Q + G P+ G
Sbjct: 110 KEQGSEMSG---PSSG 122
Score = 67.2 bits (164), Expect = 3e-13
Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS----RIKTIND 970
P +++ +C + + P + W L +G+ ++TI+
Sbjct: 12 NGPPIISSTQTQHALHGEKGQIKCFIR-STPPPDRIAWSWKENVLESGTSGRYTVETIST 70
Query: 971 FGFVI--LEINDVYLRD-SGLYTCKATNKHGEATTSCKLTVKG 1010
VI L I+++ D +Y C A N G T +L +G
Sbjct: 71 EEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQG 113
Score = 59.1 bits (143), Expect = 2e-10
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPK-LKVEWFWNGKPMKTGSRFR-----TF 759
P+ + + GE + + P ++ W W +++G+ R
Sbjct: 14 PPIISSTQTQH--ALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGTSGRYTVETIS 69
Query: 760 CDFGFV-ILEISPVYPEDCG-QYSCRAYNDYGEAVTSASMKVQGKR 803
+ G + L IS + D Y+C A+N +G +K QG
Sbjct: 70 TEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115
Score = 58.0 bits (140), Expect = 5e-10
Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 9/100 (9%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPD--FQIHTFST-- 1693
PP+ + Q A ++ + + P P I W ++ + S + + T ST
Sbjct: 14 PPIISST-QTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEE 72
Query: 1694 --KSILIMRQVFMED-SGVFAVIAENRGGKAKCSANLVVE 1730
S L + + D ++ A N G L +
Sbjct: 73 GVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQ 112
Score = 55.7 bits (134), Expect = 4e-09
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 8/75 (10%)
Query: 4 RADPN-LKIEWFKNGVPLSLGSRIR------STFDFGLVTLSI-NSLRADDSAIYTCKAT 55
R+ P +I W L G+ R ST + + TL+I N +RAD IY C A
Sbjct: 38 RSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAW 97
Query: 56 NLLGEAVSTCTLKIE 70
N G LK +
Sbjct: 98 NSFGSDTEIIRLKEQ 112
Score = 49.1 bits (117), Expect = 7e-07
Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 19/120 (15%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTM-RIDWFFNGRPFATGSRVK-----TV 1106
PP+ +S K C + S P RI W + +G+ +
Sbjct: 14 PPIISST--QTQHALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGTSGRYTVETIS 69
Query: 1107 YDFGFIS-LDMDYVYARD-SGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLPDSMSA 1164
+ G IS L + + D Y C A N +G+ ++ S++ S
Sbjct: 70 TEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRL-------KEQGSEMSGPSSG 122
Score = 48.7 bits (116), Expect = 1e-06
Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 15/108 (13%)
Query: 390 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG 449
G + S L V PP +S + G+ +C + P+ ++ W
Sbjct: 1 GSSGSSGTLT-V----NGPPIISST--QTQHALHGEKGQIKCFIRSTPPPD-RIAWSWKE 52
Query: 450 KPIF----HKNRVKMVSDFGFVVMD--IAYVQSHD-SGEYVCRAWNNF 490
+ + V+ +S V+ I+ + D Y C AWN+F
Sbjct: 53 NVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSF 100
Score = 48.3 bits (115), Expect = 1e-06
Identities = 22/115 (19%), Positives = 33/115 (28%), Gaps = 18/115 (15%)
Query: 1424 PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNM-KVEWFLNGKPLPHKNRFNPIYDFG 1481
PP TQ Q + + +C + P ++ W L + Y
Sbjct: 14 PPIIS---STQTQHALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGT--SGRYTVE 66
Query: 1482 YVAMNFGW--------VYPED-SGEYLCRATNLYGMDETRAILKTTGKPGIIYES 1527
++ G + D Y C A N +G D LK G S
Sbjct: 67 TISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSGPSS 121
Score = 43.3 bits (102), Expect = 6e-05
Identities = 19/94 (20%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTM-RIDWFFNGRPFATGSRVK-----TVYDFGFIS 563
S K C + S P RI W + +G+ + + G IS
Sbjct: 19 STQTQHALHGEKGQIKCFIR--STPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVIS 76
Query: 564 -LDMDYVYARD-SGEYICRATNKWGTAMTKAKVI 595
L + + D Y C A N +G+ ++
Sbjct: 77 TLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLK 110
Score = 42.6 bits (100), Expect = 1e-04
Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 12/88 (13%)
Query: 321 SEGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEAS----HRIRTVHAFGMV--VLEILG 372
GE P + + + +E+ + + T+ V L I
Sbjct: 26 LHGEKGQIKCFIRSTP---PPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISN 82
Query: 373 TKIEDTG-VYTCRATNKWGQAEISVNLE 399
D +Y C A N +G + L+
Sbjct: 83 IVRADFQTIYNCTAWNSFGSDTEIIRLK 110
Score = 41.8 bits (98), Expect = 3e-04
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 11/81 (13%)
Query: 591 KAKVICKVLTV----IVEWFYNGKKLPHGHRYR------TFHDFGIVILDILYCYEE-NS 639
K ++ C + + + W + L G R + + I L I
Sbjct: 30 KGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQ 89
Query: 640 GVYECRATNKYGSDVTKASLK 660
+Y C A N +GSD LK
Sbjct: 90 TIYNCTAWNSFGSDTEIIRLK 110
Score = 40.3 bits (94), Expect = 8e-04
Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 3/61 (4%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATETTEM 1619
P +S + Q GE + C + P P R+ W + + + + T +
Sbjct: 13 GPPIISSTQTQHALHGEKGQIKC-FIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTE 71
Query: 1620 E 1620
E
Sbjct: 72 E 72
Score = 36.0 bits (83), Expect = 0.026
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 7/63 (11%)
Query: 241 WFVNNKPLPAGAKFK-----TTHDFGYVA-LDIVGAYAED-SGIYTVKATNSKGSATTSG 293
W L +G + + + G ++ L I D IY A NS GS T
Sbjct: 48 WSWKENVLESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEII 107
Query: 294 TLK 296
LK
Sbjct: 108 RLK 110
Score = 34.5 bits (79), Expect = 0.082
Identities = 14/101 (13%), Positives = 25/101 (24%), Gaps = 27/101 (26%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPE-LKVEWFHNGKP 167
P IS E C + + P ++ W
Sbjct: 14 PPIISSTQTQHALHGEKGQIKCFIR-------------------STPPPDRIAWSWKENV 54
Query: 168 IF----HKNRVKMVSDFGFVVMD--IAYVQSHD-SGEYVCQ 201
+ + V+ +S V+ I+ + D Y C
Sbjct: 55 LESGTSGRYTVETISTEEGVISTLTISNIVRADFQTIYNCT 95
Score = 34.1 bits (78), Expect = 0.12
Identities = 10/62 (16%), Positives = 15/62 (24%), Gaps = 20/62 (32%)
Query: 1822 GEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGK 1881
G + L V P + + Q+ G +KC I
Sbjct: 1 GSSGSSGTLTVN--------------------GPPIISSTQTQHALHGEKGQIKCFIRST 40
Query: 1882 PR 1883
P
Sbjct: 41 PP 42
Score = 31.8 bits (72), Expect = 0.64
Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 1340 SLDIDYVYPED-QGEYVCRAYNDHGEAFTKATIS 1372
+L I + D Q Y C A+N G +
Sbjct: 77 TLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLK 110
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling
protein complex, angiogenesis, glycoprotein, HOST-virus
interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens}
PDB: 2x1x_R*
Length = 213
Score = 75.2 bits (184), Expect = 4e-15
Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 16/184 (8%)
Query: 1666 DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 1725
+ PD ++ +K + + +G+ A+ +
Sbjct: 35 ISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIM 94
Query: 1726 NLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFD--AKISATKPLDVYWLKNGKK- 1782
+VV + + L+ ++VG+ + A+ +D W K
Sbjct: 95 YIVVVVGYR------IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148
Query: 1783 -----IIPDIRYKTLEEDNLF--TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
+ D++ ++ E F TL I D G Y C A + + + V
Sbjct: 149 QHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208
Query: 1836 KAPG 1839
G
Sbjct: 209 PIEG 212
Score = 74.4 bits (182), Expect = 9e-15
Identities = 26/242 (10%), Positives = 57/242 (23%), Gaps = 56/242 (23%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW---FHNGKALSAGSRIKTINDF 971
+ +T ++ C + ++ V + + + G+RI +
Sbjct: 8 ASVSDQHGVVYITENKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPDGNRISWDSKK 64
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNI 1031
GF I + +G+ C+A + + V
Sbjct: 65 GFTI---PSYMISYAGMVFCEAKINDESYQSIMYIVVV---------------------- 99
Query: 1032 QKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 1091
+++ K+ +C + + + +W
Sbjct: 100 -----------------VGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 142
Query: 1092 FNGRPFATGSRVKTVYDFGFISLDMDY--------VYARDSGEYICRATNKWGTAMTKAK 1143
+ V S + V D G Y C A++ T
Sbjct: 143 YPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTF 202
Query: 1144 VI 1145
V
Sbjct: 203 VR 204
Score = 73.3 bits (179), Expect = 2e-14
Identities = 30/191 (15%), Positives = 52/191 (27%), Gaps = 25/191 (13%)
Query: 422 KDGDSAHFECTLTPVNDPELKVEWFHN-GKPIFHKNRVKMVSD--FGFVVMDIAYVQSHD 478
+ C + L V + F + ++ D GF I
Sbjct: 22 NKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPDGNRISWDSKKGFT---IPSYMISY 75
Query: 479 SGEYVCRAWNN------FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKS 532
+G C A N ++I + + + L L V E K+ +C +
Sbjct: 76 AGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGE--KLVLNCTARTEL 133
Query: 533 DPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDY--------VYARDSGEYICRATNK 584
+ + +W + V S + V D G Y C A++
Sbjct: 134 NVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 193
Query: 585 WGTAMTKAKVI 595
T V
Sbjct: 194 LMTKKNSTFVR 204
Score = 63.7 bits (154), Expect = 4e-11
Identities = 24/152 (15%), Positives = 38/152 (25%), Gaps = 13/152 (8%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG 406
+ + +RI G I I G+ C A + + + V +
Sbjct: 48 EKRFVPDGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYR- 103
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
L G+ CT + + W + HK V
Sbjct: 104 -IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQS 162
Query: 467 V--------VMDIAYVQSHDSGEYVCRAWNNF 490
+ I V D G Y C A +
Sbjct: 163 GSEMKKFLSTLTIDGVTRSDQGLYTCAASSGL 194
Score = 60.2 bits (145), Expect = 6e-10
Identities = 23/176 (13%), Positives = 49/176 (27%), Gaps = 11/176 (6%)
Query: 847 VTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDR-TIDKIAELEGYGHER 905
+ +++ V + +P G + D + + A++ ++
Sbjct: 33 GSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92
Query: 906 EDRIEEDLGKAPE--FLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS 963
I +G L+ + L+ C + + W +
Sbjct: 93 IMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK 152
Query: 964 RIK--------TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
+ + L I+ V D GLYTC A++ S + V
Sbjct: 153 LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208
Score = 58.6 bits (141), Expect = 2e-09
Identities = 25/214 (11%), Positives = 46/214 (21%), Gaps = 60/214 (28%)
Query: 492 FIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW---FFNGRPFA 548
FI + + V C S + + + R
Sbjct: 6 FIASVS---------DQHGVVYITENKNKTVVIPCLG---SISNLNVSLCARYPEKRFVP 53
Query: 549 TGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT------------------ 590
G+R+ GF + +G C A + +
Sbjct: 54 DGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLS 110
Query: 591 -----------KAKVICKV-----LTVIVEWFYNGKKLPHGHRYRTFHDFGIV------- 627
K + C + + W Y K H
Sbjct: 111 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL 170
Query: 628 -ILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
L I + G+Y C A++ + ++
Sbjct: 171 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 204
Score = 57.9 bits (139), Expect = 4e-09
Identities = 30/220 (13%), Positives = 52/220 (23%), Gaps = 55/220 (25%)
Query: 596 CKV----LTVIVEWFYNGKK-LPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
C L V + Y K+ +P G+R G I + +G+ C A
Sbjct: 31 CLGSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMI---SYAGMVFCEAKIND 87
Query: 651 GSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFT 710
S + + V +
Sbjct: 88 ESYQSIMYIVVVVGYRI---------------------------------------YDVV 108
Query: 711 VPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR--------TFCDF 762
+ S+ +L GE + + W + + +
Sbjct: 109 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L I V D G Y+C A + S ++V
Sbjct: 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208
Score = 56.3 bits (135), Expect = 1e-08
Identities = 28/176 (15%), Positives = 53/176 (30%), Gaps = 15/176 (8%)
Query: 236 VPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
V + + +P G + G+ I +G+ +A + S + +
Sbjct: 40 VSLCARYPEKRFVPDGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYI 96
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFE--ASLIPVGDQTMTVEF----LYNGK 349
+ V + L H LS GE A E+ + K
Sbjct: 97 ----VVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKK 152
Query: 350 PIEASHRIRTVHAFGMV--VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
+ + ++ L I G D G+YTC A++ + S + +
Sbjct: 153 LVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHED 208
Score = 53.6 bits (128), Expect = 1e-07
Identities = 29/269 (10%), Positives = 52/269 (19%), Gaps = 73/269 (27%)
Query: 1263 EPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNF 1322
+ +T + + V L V SL + + ++
Sbjct: 8 ASVSDQHGVVYITENKNKTVVIPCLGS---ISNLNV--SLCARYPEKRFVPDGNRISWDS 62
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQ 1382
GF I G C A +
Sbjct: 63 ------------KKGFT---IPSYMISYAGMVFCEAKINDES------------------ 89
Query: 1383 NQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQS 1442
Y S +Y+ + V +L +
Sbjct: 90 ----------------------YQSIMYIVV-----VVGYRIYDVVLSPSHGIELSVGEK 122
Query: 1443 TKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW--------VYPED 1494
C + + W HK N + + V D
Sbjct: 123 LVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD 182
Query: 1495 SGEYLCRATNLYGMDETRAILKTTGKPGI 1523
G Y C A++ + ++ P
Sbjct: 183 QGLYTCAASSGLMTKKNSTFVRVHEDPIE 211
Score = 52.9 bits (126), Expect = 2e-07
Identities = 18/143 (12%), Positives = 33/143 (23%), Gaps = 16/143 (11%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFT 1799
+ S + N + S L+V + + D+
Sbjct: 7 IASVSDQHGVVYITENKNKTVVIPCLGS-ISNLNVSLCARYPEKRFVPDGNRISWDSKKG 65
Query: 1800 LLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAE 1859
I ++ +G C A N + +VV V
Sbjct: 66 FTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRI---------------YDVVLS 110
Query: 1860 PLKDQNVKEGSAVTLKCRITGKP 1882
P + G + L C +
Sbjct: 111 PSHGIELSVGEKLVLNCTARTEL 133
Score = 49.4 bits (117), Expect = 2e-06
Identities = 28/207 (13%), Positives = 47/207 (22%), Gaps = 63/207 (30%)
Query: 6 DPNLKIEW---FKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
NL + + + G+RI G I S + + C+A
Sbjct: 35 ISNLNVSLCARYPEKRFVPDGNRISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQ 91
Query: 63 STCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
S + + + + V +S + +E
Sbjct: 92 SIMYIVVVVGYRI--------------------------------YDVVLSPSHGIELSV 119
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 182
E + L CT + + W + HK V
Sbjct: 120 GEKL-----------------VLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQS 162
Query: 183 V--------VMDIAYVQSHDSGEYVCQ 201
+ I V D G Y C
Sbjct: 163 GSEMKKFLSTLTIDGVTRSDQGLYTCA 189
Score = 49.4 bits (117), Expect = 3e-06
Identities = 27/193 (13%), Positives = 44/193 (22%), Gaps = 61/193 (31%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFW---NGKPMKTGSRFRTFCDFGFVILEISPVYPED 776
+ + + L V + + G+R GF I
Sbjct: 22 NKNKTVVIPCLGS---ISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTI---PSYMISY 75
Query: 777 CGQYSCRAYND--------------------------------YGEAVT----------- 793
G C A + GE +
Sbjct: 76 AGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNV 135
Query: 794 -------SASMKVQGKRSIILESQLPKGMEVFISFHE--ISPVYPEDCGQYSCRAYNDYG 844
S K Q K+ + + + G E+ I V D G Y+C A +
Sbjct: 136 GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM 195
Query: 845 EAVTSASMKVQGK 857
S ++V
Sbjct: 196 TKKNSTFVRVHED 208
Score = 49.4 bits (117), Expect = 3e-06
Identities = 19/207 (9%), Positives = 40/207 (19%), Gaps = 33/207 (15%)
Query: 1563 PVFVSQPEAQK--VQEGEPARFCTRVTGYPRPRVMW---------LINGHTIVNEIVRKI 1611
Q + + + V + +G+ I + +
Sbjct: 8 ASVSDQHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGF 66
Query: 1612 TATE-----------TTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFE 1660
T ++ + + V ++
Sbjct: 67 TIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLN 126
Query: 1661 --VEFDGDPLPTIKWFREDFPITS--------SPDFQIHTFSTKSILIMRQVFMEDSGVF 1710
+ + W S L + V D G++
Sbjct: 127 CTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLY 186
Query: 1711 AVIAENRGGKAKCSANLVVEEKRQGGR 1737
A + K S + V E GR
Sbjct: 187 TCAASSGLMTKKNSTFVRVHEDPIEGR 213
Score = 47.9 bits (113), Expect = 8e-06
Identities = 10/75 (13%), Positives = 25/75 (33%), Gaps = 8/75 (10%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--------TLSINSLRADDSAIYTCKATNL 57
+ + W + TL+I+ + D +YTC A++
Sbjct: 134 NVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 193
Query: 58 LGEAVSTCTLKIEDR 72
L ++ +++ +
Sbjct: 194 LMTKKNSTFVRVHED 208
Score = 44.4 bits (104), Expect = 1e-04
Identities = 28/228 (12%), Positives = 51/228 (22%), Gaps = 58/228 (25%)
Query: 102 PELVF-DSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVE 160
F S + + +N+ V C + L V
Sbjct: 2 YRSPFIASVSDQHGVVYITENKNKTVVIPCLG--------------------SISNLNVS 41
Query: 161 WFHN-GKPIFHKNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKT 217
+ F + ++ D GF I +G C+ +
Sbjct: 42 LCARYPEKRFVPDGNRISWDSKKGFT---IPSYMISYAGMVFCE--AKINDESYQSIMYI 96
Query: 218 THDFGYVALDIELMLKTLVPFTE---------------------WFVNNKPLPAGAKFK- 255
GY D+ L + + W +
Sbjct: 97 VVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNR 156
Query: 256 -------TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
+ L I G D G+YT A++ + S ++
Sbjct: 157 DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 204
Score = 44.0 bits (103), Expect = 2e-04
Identities = 19/187 (10%), Positives = 35/187 (18%), Gaps = 50/187 (26%)
Query: 1427 FVTQIKTQDQLVEM-----QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
F+ + Q +V + ++ C N+ V N I
Sbjct: 6 FIASVSDQHGVVYITENKNKTVVIPCL---GSISNLNVSLCARYPEKRFVPDGNRISWDS 62
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
+G C A
Sbjct: 63 KKGFTIPSYMISYAGMVFCEAKI------------------------------------- 85
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVM--WLI 1598
+ +V + V +S ++ GE CT + W
Sbjct: 86 -NDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCT-ARTELNVGIDFNWEY 143
Query: 1599 NGHTIVN 1605
+
Sbjct: 144 PSSKHQH 150
Score = 39.4 bits (91), Expect = 0.006
Identities = 15/112 (13%), Positives = 29/112 (25%), Gaps = 10/112 (8%)
Query: 1047 DEEKP-NPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW---FFNGRPFATGSR 1102
D P V + + V C S + + + R G+R
Sbjct: 1 DYRSPFIASVSDQHGVVYITENKNKTVVIPCLG---SISNLNVSLCARYPEKRFVPDGNR 57
Query: 1103 VKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVT 1154
+ GF + +G C A + + ++ + I
Sbjct: 58 ISWDSKKGFT---IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYD 106
Score = 37.5 bits (86), Expect = 0.022
Identities = 14/112 (12%), Positives = 29/112 (25%), Gaps = 9/112 (8%)
Query: 1261 PEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIF 1320
++ + + E + + + ++ + +P L+
Sbjct: 102 YRIYDVVLSPSHGIELSVGEKLVLNCTAR--TELNVGIDFNWE----YPSSKHQHKKLVN 155
Query: 1321 NFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
S +L ID V DQG Y C A + +
Sbjct: 156 R---DLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 204
Score = 32.1 bits (72), Expect = 1.2
Identities = 9/73 (12%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 792 VTSASMKVQGKRSIILESQLPKGMEVFISFHE---ISPVYPEDCGQYSCRAYNDYGEAVT 848
+ +++ V + +P G + + I G C A + +
Sbjct: 33 GSISNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQS 92
Query: 849 SASMKVQGKRSII 861
+ V I
Sbjct: 93 IMYIVVVVGYRIY 105
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states,
actin-binding, cardiomyopathy, cell adhesion, disease
mutation, immunoglobulin domain; 1.30A {Homo sapiens}
PDB: 2v6h_A 2avg_A
Length = 108
Score = 71.6 bits (175), Expect = 6e-15
Identities = 21/104 (20%), Positives = 32/104 (30%), Gaps = 12/104 (11%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPL---DVYWLKN---------GKKIIPDIRY 1789
F+ + VG F A+++ L V W K G+ + Y
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSY 63
Query: 1790 KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ LF L I +A +G+Y C L V
Sbjct: 64 DRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
Score = 69.6 bits (170), Expect = 3e-14
Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 12/105 (11%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHN---------GKALSAGSR 964
F+ P D + F R+ P V+WF G+ L
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKP-PVVKWFKGKWVDLSSKVGQHLQLHDS 62
Query: 965 IKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+ L I D +G Y C+ + K ++ LTV
Sbjct: 63 YDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
Score = 65.4 bits (159), Expect = 8e-13
Identities = 18/105 (17%), Positives = 28/105 (26%), Gaps = 12/105 (11%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSPDFQIHTFSTK- 1694
+F + Q F G L P +KWF+ + SS Q
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSY 63
Query: 1695 --------SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
L + +G + + + NL V E
Sbjct: 64 DRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVHE 108
Score = 60.0 bits (145), Expect = 7e-11
Identities = 19/105 (18%), Positives = 33/105 (31%), Gaps = 11/105 (10%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKL-KVEWF---WNGKPMKTGSRFRT--- 758
+F + + + + G + F AR+ K V+WF W K G +
Sbjct: 4 IGLFVMRPQDGE-VTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDS 62
Query: 759 ---FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L I+ P G Y C ++ ++ V
Sbjct: 63 YDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
Score = 50.0 bits (119), Expect = 2e-07
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 9/71 (12%)
Query: 10 KIEWFKN---------GVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
++WFK G L L L L I + + Y C+ +
Sbjct: 38 VVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKF 97
Query: 61 AVSTCTLKIED 71
S L + +
Sbjct: 98 DCSNFNLTVHE 108
Score = 49.2 bits (117), Expect = 4e-07
Identities = 10/53 (18%), Positives = 17/53 (32%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
G+ ++ + L I + TG Y C + K + NL
Sbjct: 53 VGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLT 105
Score = 45.0 bits (106), Expect = 1e-05
Identities = 13/117 (11%), Positives = 30/117 (25%), Gaps = 20/117 (17%)
Query: 1262 EEP-PRFITEIESVTVQEAEPVRFETRVE---PRVDPR---LRVECSLSTAFFFPFINIS 1314
++P F+ + V + F RV P + + ++ + +
Sbjct: 1 DDPIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLH 60
Query: 1315 TAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
++ + + L I P G Y C + +
Sbjct: 61 DSYDRAS-------------KVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNL 104
Score = 43.4 bits (102), Expect = 4e-05
Identities = 6/33 (18%), Positives = 11/33 (33%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I+ P G Y C ++ ++ V
Sbjct: 75 HITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107
Score = 43.4 bits (102), Expect = 5e-05
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 15/105 (14%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMK---VEWF---------LNGKPLPHK 1471
FV + + ++ S F ++A G +K V+WF G+ L
Sbjct: 4 IGLFVMRPQDG-EVTVGGSITFSARVA--GASLLKPPVVKWFKGKWVDLSSKVGQHLQLH 60
Query: 1472 NRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
+ ++ ++ P +G Y C + D + L
Sbjct: 61 DSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLT 105
Score = 43.4 bits (102), Expect = 5e-05
Identities = 15/98 (15%), Positives = 27/98 (27%), Gaps = 15/98 (15%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMR---IDWFFN---------GRPFATG 1100
+F + QD +V G + F R+ ++ + WF G+
Sbjct: 4 IGLFVMRPQD-GEVTVGGSITFSARV--AGASLLKPPVVKWFKGKWVDLSSKVGQHLQLH 60
Query: 1101 SRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 1138
L + +G Y C + K
Sbjct: 61 DSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFD 98
Score = 41.5 bits (97), Expect = 2e-04
Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 27/109 (24%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN--- 164
+F+ D E ++ F RV + + P V+WF
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGAS--------------LLKPPV--VKWFKGKWV 47
Query: 165 ------GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK 207
G+ + + S + I Q +G Y C+ V+ K
Sbjct: 48 DLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCE--VSTK 94
Score = 41.1 bits (96), Expect = 3e-04
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 1562 APVFVSQPEAQKVQEGEPARFCTRVTGYP---RPRVMWL 1597
+FV +P+ +V G F RV G P V W
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWF 42
Score = 40.4 bits (94), Expect = 6e-04
Identities = 16/95 (16%), Positives = 26/95 (27%), Gaps = 15/95 (15%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLT---PVNDPELKVEWFHN---------GKPIFHK 455
F + E + G S F + + P V+WF G+ +
Sbjct: 4 IGLFVMRPQDGE-VTVGGSITFSARVAGASLLKPPV--VKWFKGKWVDLSSKVGQHLQLH 60
Query: 456 NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ S + I Q +G Y C
Sbjct: 61 DSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKD 95
Score = 40.0 bits (93), Expect = 8e-04
Identities = 14/67 (20%), Positives = 21/67 (31%), Gaps = 9/67 (13%)
Query: 603 VEWFYN---------GKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
V+WF G+ L Y + L I +G Y C + K D
Sbjct: 39 VKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFD 98
Query: 654 VTKASLK 660
+ +L
Sbjct: 99 CSNFNLT 105
Score = 39.6 bits (92), Expect = 0.001
Identities = 16/104 (15%), Positives = 29/104 (27%), Gaps = 20/104 (19%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMR---IDWFFN---------G 544
PI +F + P + +V G + F R+ ++ + WF G
Sbjct: 3 PIGLF--VMRP----QDGEVTVGGSITFSARV--AGASLLKPPVVKWFKGKWVDLSSKVG 54
Query: 545 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 588
+ L + +G Y C + K
Sbjct: 55 QHLQLHDSYDRASKVYLFELHITDAQPAFTGSYRCEVSTKDKFD 98
Score = 38.8 bits (90), Expect = 0.002
Identities = 6/38 (15%), Positives = 11/38 (28%)
Query: 259 DFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLK 296
L I A +G Y + + ++ L
Sbjct: 68 KVYLFELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLT 105
Score = 33.4 bits (76), Expect = 0.15
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 1851 QDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
D +D V G ++T R+ G
Sbjct: 1 DDPIGLFVMRPQDGEVTVGGSITFSARVAGAS 32
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin
superfamily, integrin-binding, cell adhesion protein;
1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A
1vsc_A
Length = 202
Score = 74.4 bits (182), Expect = 7e-15
Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 20/166 (12%)
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 1724
G P W + I S + ++ T S L M V + + A K +
Sbjct: 27 GCESPFFSWRTQ---IDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKG 83
Query: 1725 ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP---LDVYWLKNGK 1781
+ + P S + G+ ++ P L++ LK
Sbjct: 84 IQVEIYS----------FPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH 133
Query: 1782 KIIPDIRYKTLEEDNLFT---LLIIEAVVEDSGA-YECVAMNNAGE 1823
+ + + +L T + V+ED G C A + E
Sbjct: 134 LMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179
Score = 66.7 bits (162), Expect = 3e-12
Identities = 21/154 (13%), Positives = 46/154 (29%), Gaps = 11/154 (7%)
Query: 349 KPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQP 408
I++ + + L + + Y C AT + + E + +E + P
Sbjct: 37 TQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE-IYSFPKDP 95
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFV 467
I L+ G +C++ V L+++ + + ++
Sbjct: 96 -----EIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLE 150
Query: 468 VMDIAY----VQSHDSGEYVCRAWNNFIFIPPFP 497
+ V VCRA + + P
Sbjct: 151 TKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVP 184
Score = 53.2 bits (127), Expect = 1e-07
Identities = 25/207 (12%), Positives = 47/207 (22%), Gaps = 55/207 (26%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
C T S W + G K N+ L +N V + Y C AT
Sbjct: 21 LTCSTT--GCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPVSFGNEHSYLCTATC 75
Query: 996 KHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPV 1055
+ + ++ + + P+
Sbjct: 76 ESRKLEKGIQVEIYSFPKDPEIHL--------------------------------SGPL 103
Query: 1056 FTSQLQDNLDVPEAGK-VHFDCRLE-PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 1113
EAGK + C + + ID + ++ +
Sbjct: 104 ------------EAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLET 151
Query: 1114 LDMDYVYAR----DSGEYICRATNKWG 1136
++ + +CRA
Sbjct: 152 KSLEVTFTPVIEDIGKVLVCRAKLHID 178
Score = 51.3 bits (122), Expect = 5e-07
Identities = 19/217 (8%), Positives = 52/217 (23%), Gaps = 59/217 (27%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ W + + L ++ + + TL++N + + Y C AT +
Sbjct: 28 CESPFFSW-RTQIDSPLNGKVTN--EGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGI 84
Query: 66 TLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENEN 125
++I PE+ P+ + +
Sbjct: 85 QVEIYSFPKD--------------------------PEIHLSGPL----------EAGKP 108
Query: 126 VHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM 185
+ C V L+++ + + ++
Sbjct: 109 ITVKCSVADVYPF----------------DRLEIDLLKGDHLMKSQEFLEDADRKSLETK 152
Query: 186 DIAY----VQSHDSGEYVCQWFVNNKPLPAGAKFKTT 218
+ V VC+ ++ + + +
Sbjct: 153 SLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQA 189
Score = 47.5 bits (112), Expect = 9e-06
Identities = 23/199 (11%), Positives = 44/199 (22%), Gaps = 43/199 (21%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 570
+ V C + W G K + +L M+ V
Sbjct: 8 ESRYLAQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPVS 62
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI-------------------------CKVL------ 599
+ Y+C AT + +V C V
Sbjct: 63 FGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFD 122
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCY----EENSGVYECRATNKYGSDVT 655
+ ++ + + + + E+ V CRA
Sbjct: 123 RLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEM-- 180
Query: 656 KASLKCVSKTNLILESQLP 674
S+ V + L+ +
Sbjct: 181 -DSVPTVRQAVKELQVYIS 198
Score = 45.5 bits (107), Expect = 4e-05
Identities = 17/133 (12%), Positives = 35/133 (26%), Gaps = 22/133 (16%)
Query: 1750 SSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVED 1809
S + +G + + W + K E TL + +
Sbjct: 9 SRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPVSFGN 65
Query: 1810 SGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEG 1869
+Y C A + + ++ + S P E ++ G
Sbjct: 66 EHSYLCTATCESRKLEKGIQVEIYSF-------------------PKDPEIHLSGPLEAG 106
Query: 1870 SAVTLKCRITGKP 1882
+T+KC +
Sbjct: 107 KPITVKCSVADVY 119
Score = 44.8 bits (105), Expect = 9e-05
Identities = 28/178 (15%), Positives = 45/178 (25%), Gaps = 22/178 (12%)
Query: 1564 VFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM--- 1619
+ + Q G+ C TG P W + +N V T T M
Sbjct: 3 IETTPESRYLAQIGDSVSLTC-STTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPV 61
Query: 1620 --EHKGKIQERVVDASEKPAK--------PPVFTKKIQPCRAFEQDQARFEVEFDGD--- 1666
++ S K K P + +
Sbjct: 62 SFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPF 121
Query: 1667 PLPTIKWFREDFPITSSP---DFQIHTFSTKSILIMRQVFMEDSG-VFAVIAENRGGK 1720
I + D + S D + TKS+ + +ED G V A+ +
Sbjct: 122 DRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDE 179
Score = 44.0 bits (103), Expect = 2e-04
Identities = 15/184 (8%), Positives = 45/184 (24%), Gaps = 54/184 (29%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L ++ V ++ Y+C A + + + ++
Sbjct: 55 TLTMNPVSFGNEHSYLCTATCESRKLEKGIQV------------EIYS------------ 90
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVG-DPNMK 1458
+I L + +C +A V ++
Sbjct: 91 -------------------------FPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLE 125
Query: 1459 VEWFLNGKPLPHKNRFNP----IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
++ + + + + + F V + +CRA ++
Sbjct: 126 IDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPT 185
Query: 1515 LKTT 1518
++
Sbjct: 186 VRQA 189
Score = 42.8 bits (100), Expect = 3e-04
Identities = 9/105 (8%), Positives = 25/105 (23%), Gaps = 12/105 (11%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTN-DPSMTVEWFHNGKALSAGSRIKTINDFGF-- 973
P+ L +C + + ++ + + ++ +
Sbjct: 92 PKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLET 151
Query: 974 --VILEINDVYLRDSGLYTCKATNKHGEA-------TTSCKLTVK 1009
+ + V + C+A E +L V
Sbjct: 152 KSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVY 196
Score = 40.9 bits (95), Expect = 0.002
Identities = 19/215 (8%), Positives = 47/215 (21%), Gaps = 54/215 (25%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
W P + + ++ + N Y C AT + +
Sbjct: 33 FSW-RTQIDSPLNGKVTNEGTTSTLTMNPVS--FGNEHSYLCTATCESRKLEKGIQV--- 86
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+ + L G
Sbjct: 87 ----------------------------------------EIYSFPKDPEIHLSGPLEAG 106
Query: 723 ENAHFEARLTPTD-DPKLKVEWFWNGKPMKTGSRFRTFCDFGF----VILEISPVYPEDC 777
+ + + +L+++ MK+ + + +PV +
Sbjct: 107 KPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIG 166
Query: 778 GQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLP 812
CRA E + +++ + L+ +
Sbjct: 167 KVLVCRAKLHIDEMDSVPTVR---QAVKELQVYIS 198
Score = 40.1 bits (93), Expect = 0.003
Identities = 16/146 (10%), Positives = 39/146 (26%), Gaps = 17/146 (11%)
Query: 255 KTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQF 314
K T++ L + + Y AT ++ + +
Sbjct: 46 KVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVE------I--YSFPKDPEI 97
Query: 315 QHLSNLSEGEIAHFE---ASLIPVGDQTMTVEFLYNGKPIEASHRI----RTVHAFGMVV 367
L G+ + A + P + ++ L +++ + R +
Sbjct: 98 HLSGPLEAGKPITVKCSVADVYPFD--RLEIDLLKGDHLMKSQEFLEDADRKSLETKSLE 155
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAE 393
+ + V CRA + +
Sbjct: 156 VTFTPVIEDIGKVLVCRAKLHIDEMD 181
Score = 38.2 bits (88), Expect = 0.012
Identities = 23/197 (11%), Positives = 46/197 (23%), Gaps = 52/197 (26%)
Query: 1427 FVTQIKTQDQLVEM--QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVA 1484
F + + + + S C G + W + N +
Sbjct: 1 FKIETTPESRYLAQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLNGKVTN---EGTTST 55
Query: 1485 MNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEA 1544
+ V + YLC AT E ++ P
Sbjct: 56 LTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFP----------------------- 92
Query: 1545 SWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR--VMWLINGH 1601
+ ++ G+P C+ YP R + L H
Sbjct: 93 -------------------KDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDH 133
Query: 1602 TIVNEIVRKITATETTE 1618
+ ++ + ++ E
Sbjct: 134 LMKSQEFLEDADRKSLE 150
Score = 38.2 bits (88), Expect = 0.013
Identities = 12/90 (13%), Positives = 24/90 (26%), Gaps = 6/90 (6%)
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT 793
T W + + L ++PV + Y C A + +
Sbjct: 26 TGCESPFFSW-RTQIDSPLNGKVTN--EGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82
Query: 794 SASMKVQGKR---SIILESQLPKGMEVFIS 820
+++ I L L G + +
Sbjct: 83 GIQVEIYSFPKDPEIHLSGPLEAGKPITVK 112
Score = 37.1 bits (85), Expect = 0.033
Identities = 17/184 (9%), Positives = 43/184 (23%), Gaps = 28/184 (15%)
Query: 128 FDCRVEPSKDATMKIG---KLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
F P +IG L C+ T W + K+ ++
Sbjct: 1 FKIETTPESRYLAQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLNG---KVTNEGTTST 55
Query: 185 MDIAYVQSHDSGEYVCQWFVNNKPLPAGAK--FKTTHDFGYVALDIELMLKTLVPFT--- 239
+ + V + Y+C ++ L G + + + L L +
Sbjct: 56 LTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSV 115
Query: 240 -----------EWFVNNKPLPAGAKFKTTHD----FGYVALDIVGAYAEDSGIYTVKATN 284
+ + + + + + + + + +A
Sbjct: 116 ADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKL 175
Query: 285 SKGS 288
Sbjct: 176 HIDE 179
Score = 36.7 bits (84), Expect = 0.037
Identities = 13/99 (13%), Positives = 23/99 (23%), Gaps = 5/99 (5%)
Query: 1061 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVY 1120
+ V C + W G K + +L M+ V
Sbjct: 8 ESRYLAQIGDSVSLTCSTT--GCESPFFSWRTQIDSPLNG---KVTNEGTTSTLTMNPVS 62
Query: 1121 ARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTESQLP 1159
+ Y+C AT + +V +
Sbjct: 63 FGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSG 101
Score = 34.0 bits (77), Expect = 0.32
Identities = 6/50 (12%), Positives = 14/50 (28%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEG 872
++PV + Y C A + + +++ G
Sbjct: 57 TMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAG 106
Score = 30.9 bits (69), Expect = 2.9
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
P + G +V+L C TG
Sbjct: 6 TPESRYLAQIGDSVSLTCSTTGCES 30
>1he7_A High affinity nerve growth factor receptor; transferase,
TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP:
b.1.1.4 PDB: 1wwa_X 1www_X
Length = 126
Score = 71.9 bits (176), Expect = 8e-15
Identities = 22/97 (22%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Query: 923 PTDLTLAESTLAHFEC-RLTPTNDPSMTVEWFHNGKALSAGSRIKTI-------NDFGFV 974
P + L + H C + P+ ++ W NG L+ S I T
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHG 63
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGR 1011
L +N ++G YT A N G+A+ S
Sbjct: 64 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 100
Score = 66.1 bits (161), Expect = 8e-13
Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 10/105 (9%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKATN 56
P + W NG L+ S I + F L +N ++ YT A N
Sbjct: 25 DGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 84
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDE 101
G+A ++ D + N D +P +KDE
Sbjct: 85 PFGQASASIMAAFMDNPFEFNP---EDPIPDTNSTSGDPVEKKDE 126
Score = 62.3 bits (151), Expect = 2e-11
Identities = 17/124 (13%), Positives = 32/124 (25%), Gaps = 10/124 (8%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK---- 1694
P + DG P P+++W + +
Sbjct: 3 MPASVQLHTAVEMHHWC---IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANET 59
Query: 1695 ---SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISS 1751
L + Q ++G + ++A N G+A S + P +T
Sbjct: 60 VRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTSGD 119
Query: 1752 AVIN 1755
V
Sbjct: 120 PVEK 123
Score = 56.9 bits (137), Expect = 1e-09
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 341 TVEFLYNGKPIEASHRIRT-------VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
++ +L+NG + + I T L + + G YT A N +GQA
Sbjct: 31 SLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQAS 90
Query: 394 ISVNLECVDKSKGQPPK 410
S+ +D P+
Sbjct: 91 ASIMAAFMDNPFEFNPE 107
Score = 56.5 bits (136), Expect = 2e-09
Identities = 17/95 (17%), Positives = 26/95 (27%), Gaps = 8/95 (8%)
Query: 716 IDDLREGENAHFEARLTPTD-DPKLKVEWFWNGKPMKTGSRFRT-------FCDFGFVIL 767
L H D P + W +NG + S T L
Sbjct: 6 SVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCL 65
Query: 768 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
++ + G Y+ A N +G+A S
Sbjct: 66 RLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDN 100
Score = 56.1 bits (135), Expect = 3e-09
Identities = 18/109 (16%), Positives = 25/109 (22%), Gaps = 15/109 (13%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPV-GDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P V QL C V G P + W NG L + +
Sbjct: 3 MPASV-------QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPA 55
Query: 1483 VAMNFGW-------VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGII 1524
++G Y A N +G + P
Sbjct: 56 ANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPFEF 104
Score = 53.8 bits (129), Expect = 2e-08
Identities = 14/77 (18%), Positives = 24/77 (31%), Gaps = 9/77 (11%)
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLF-------TLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ WL NG + T + L + + ++G Y +A N G+A
Sbjct: 32 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91
Query: 1827 EAELVVQSKKAPGKQAP 1843
P + P
Sbjct: 92 SIMAAFMDN--PFEFNP 106
Score = 53.0 bits (127), Expect = 3e-08
Identities = 14/91 (15%), Positives = 23/91 (25%), Gaps = 15/91 (16%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKM------ 460
P L H C V+ P + W NG + + +
Sbjct: 3 MPASVQ-------LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPA 55
Query: 461 -VSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
+ + ++G Y A N F
Sbjct: 56 ANETVRHGCLRLNQPTHVNNGNYTLLAANPF 86
Score = 51.5 bits (123), Expect = 9e-08
Identities = 12/65 (18%), Positives = 17/65 (26%), Gaps = 7/65 (10%)
Query: 603 VEWFYNGKKLPHGHRYRT-------FHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
+ W +NG L T L + N+G Y A N +G
Sbjct: 32 LRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASA 91
Query: 656 KASLK 660
Sbjct: 92 SIMAA 96
Score = 49.6 bits (118), Expect = 5e-07
Identities = 18/100 (18%), Positives = 29/100 (29%), Gaps = 15/100 (15%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDC-RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG- 1110
P + A ++H C P + W FNG S + T +
Sbjct: 3 MPASVQ-------LHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPA 55
Query: 1111 ------FISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
L ++ ++G Y A N +G A
Sbjct: 56 ANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASIMA 95
Score = 48.4 bits (115), Expect = 1e-06
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 514 LDVPEAGKVHFDC-RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG-------FISLD 565
+ + A ++H C P + W FNG S + T + L
Sbjct: 7 VQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLR 66
Query: 566 MDYVYARDSGEYICRATNKWGTAMTKAKV 594
++ ++G Y A N +G A
Sbjct: 67 LNQPTHVNNGNYTLLAANPFGQASASIMA 95
Score = 44.9 bits (106), Expect = 2e-05
Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 237 PFTEWFVNNKPLPAGAKFKT-------THDFGYVALDIVGAYAEDSGIYTVKATNSKGSA 289
P W N L + T + L + ++G YT+ A N G A
Sbjct: 30 PSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 89
Query: 290 TTSGTLKCLER 300
+ S ++
Sbjct: 90 SASIMAAFMDN 100
Score = 38.4 bits (89), Expect = 0.004
Identities = 6/54 (11%), Positives = 14/54 (25%), Gaps = 7/54 (12%)
Query: 154 DPELKVEWFHNGKPIFHKNRVKM-------VSDFGFVVMDIAYVQSHDSGEYVC 200
P + W NG + + + + + ++G Y
Sbjct: 27 QPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL 80
Score = 34.9 bits (80), Expect = 0.060
Identities = 8/38 (21%), Positives = 13/38 (34%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
L ++ + G Y A N G+A + P
Sbjct: 64 CLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNP 101
Score = 34.5 bits (79), Expect = 0.085
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 1569 PEAQKVQEGEPARF---CTRVTGYPRPRVMWLINGHTI 1603
P + ++ V G P P + WL NG +
Sbjct: 4 PASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVL 41
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich,
C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 96
Score = 69.4 bits (170), Expect = 2e-14
Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 1735 GGRGGVV--PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTL 1792
G G + + G ++ A ++W+K+G + L
Sbjct: 1 GSSGSSGLEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPL-------PL 53
Query: 1793 EEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
L++ E +D G Y CVA +++ + + +
Sbjct: 54 PPSP--VLILPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 69.4 bits (170), Expect = 3e-14
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 9/91 (9%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
+ + E P P I W ++ P+ P +LI
Sbjct: 10 EVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPPS---------PVLI 60
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
+ ++ +D G ++ +A + + S + +
Sbjct: 61 LPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 68.6 bits (168), Expect = 5e-14
Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
+ + P +A C PS + W +G L +
Sbjct: 10 EVQLVVEPEGGAVAPGGTVTLTCE--VPAQPSPQIHWMKDGVPLPLPPS---------PV 58
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
L + ++ +D G Y+C AT+ S +++
Sbjct: 59 LILPEIGPQDQGTYSCVATHSSHGPQESRAVSI 91
Score = 60.9 bits (148), Expect = 3e-11
Identities = 15/103 (14%), Positives = 31/103 (30%), Gaps = 12/103 (11%)
Query: 698 TADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR 757
++ + V + G P ++ W +G P+
Sbjct: 2 SSGSSGLEEVQLVVEPEGGA-VAPGGTVTLTCE--VPAQPSPQIHWMKDGVPLPLPPSP- 57
Query: 758 TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+L + + P+D G YSC A + S ++ +
Sbjct: 58 --------VLILPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 58.2 bits (141), Expect = 2e-10
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 16/98 (16%)
Query: 1423 QPPRFVTQIKTQDQLVEMQST-KFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN-PIYDF 1480
+ + V + + V T C+ P+ ++ W +G PLP + +
Sbjct: 9 EEVQLVVE--PEGGAVAPGGTVTLTCE--VPAQPSPQIHWMKDGVPLPLPPSPVLILPE- 63
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTT 1518
+ P+D G Y C AT+ + + +
Sbjct: 64 ---------IGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 58.2 bits (141), Expect = 3e-10
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
E A P+ +I W K+GVPL L L + + D Y+C AT+
Sbjct: 33 EVPAQPSPQIHWMKDGVPLPLPPS---------PVLILPEIGPQDQGTYSCVATHSSHGP 83
Query: 62 VSTCTLKI 69
+ + I
Sbjct: 84 QESRAVSI 91
Score = 53.6 bits (129), Expect = 9e-09
Identities = 12/89 (13%), Positives = 27/89 (30%), Gaps = 12/89 (13%)
Query: 401 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKM 460
S + + + + G + C P ++ W +G P+ +
Sbjct: 3 SGSSGLEEVQLVVEPEGGA-VAPGGTVTLTCE--VPAQPSPQIHWMKDGVPLPLPPSPVL 59
Query: 461 VSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+ + + D G Y C A ++
Sbjct: 60 I---------LPEIGPQDQGTYSCVATHS 79
Score = 53.6 bits (129), Expect = 1e-08
Identities = 18/92 (19%), Positives = 28/92 (30%), Gaps = 12/92 (13%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
+ + V G V C E + P+ +I W +G P
Sbjct: 10 EVQLVVEPEG-GAVAPGGTVTLTC--EVPAQPSPQIHWMKDGVPLPLPPSP--------- 57
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
L + + +D G Y C AT+ V
Sbjct: 58 VLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89
Score = 53.2 bits (128), Expect = 1e-08
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1561 EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
E V +PE V G V P P++ W+ +G +
Sbjct: 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPL 51
Score = 47.8 bits (114), Expect = 1e-06
Identities = 11/96 (11%), Positives = 21/96 (21%), Gaps = 28/96 (29%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
+ + V C V P ++ W +
Sbjct: 7 GLEEVQLVVEPEGGAVAPGGTVTLTCEVP---------A----------QPSPQIHWMKD 47
Query: 165 GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
G P+ ++ + + D G Y C
Sbjct: 48 GVPLPLPPSPVLI---------LPEIGPQDQGTYSC 74
Score = 46.6 bits (111), Expect = 3e-06
Identities = 19/119 (15%), Positives = 28/119 (23%), Gaps = 36/119 (30%)
Query: 1258 DEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFI----NI 1313
E + + E E V V E P P I +
Sbjct: 4 GSSGLEEVQLVVEPEGGAVAPGGTVTLT--CEVPAQPS-------------PQIHWMKD- 47
Query: 1314 STAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
P+ L + + P+DQG Y C A + +S
Sbjct: 48 ----------------GVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQESRAVS 90
Score = 45.9 bits (109), Expect = 4e-06
Identities = 18/87 (20%), Positives = 28/87 (32%), Gaps = 11/87 (12%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
V G V C E + P+ +I W +G P L + + +
Sbjct: 19 GGAVAPGGTVTLTC--EVPAQPSPQIHWMKDGVPLPLPPSP---------VLILPEIGPQ 67
Query: 573 DSGEYICRATNKWGTAMTKAKVICKVL 599
D G Y C AT+ V ++
Sbjct: 68 DQGTYSCVATHSSHGPQESRAVSISII 94
Score = 43.6 bits (103), Expect = 3e-05
Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 12/92 (13%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
++ + + ++ G + + ++ +G P+ V
Sbjct: 11 VQLVVEPEGGA-VAPGGTVTLTCE--VPAQPSPQIHWMKDGVPLPLPPS---------PV 58
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L + +D G Y+C AT+ + S +
Sbjct: 59 LILPEIGPQDQGTYSCVATHSSHGPQESRAVS 90
Score = 41.6 bits (98), Expect = 2e-04
Identities = 13/59 (22%), Positives = 19/59 (32%), Gaps = 9/59 (15%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
P W + PLP L + +D G Y+ AT+S S +
Sbjct: 40 PQIHWMKDGVPLPLPPSP---------VLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89
Score = 40.1 bits (94), Expect = 5e-04
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ + P+D G YSC A + S ++ +
Sbjct: 61 LPEIGPQDQGTYSCVATHSSHGPQESRAVSIS 92
Score = 39.7 bits (93), Expect = 8e-04
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
E + + V G VTL C + +P
Sbjct: 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPS 39
Score = 37.0 bits (86), Expect = 0.006
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 9/57 (15%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W +G LP +L + ++ G Y C AT+ ++
Sbjct: 42 IHWMKDGVPLPLPPSP---------VLILPEIGPQDQGTYSCVATHSSHGPQESRAV 89
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural
plasticity, cell-surface dimerizatio adhesion; HET: NAG
FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4
PDB: 1p53_A*
Length = 265
Score = 74.3 bits (182), Expect = 2e-14
Identities = 32/234 (13%), Positives = 53/234 (22%), Gaps = 57/234 (24%)
Query: 376 EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTP 435
E T TC E + P + E + +G +C P
Sbjct: 71 EGTQRLTCAVILGNQSQETLQTVTIY-----SFPAPNVILTKPE-VSEGTEVTVKCEAHP 124
Query: 436 VNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF----- 490
+ + NG P + + + + C A
Sbjct: 125 ------RAKVTLNGVPAQPLGPR--------AQLLLKATPEDNGRSFSCSATLEVAGQLI 170
Query: 491 ---------IFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF 541
+ P + P N PE + C + +P +
Sbjct: 171 HKNQTRELRVLYGP----RLDERDCPG----NWTWPENSQQTPMC--QAWGNPLPELKCL 220
Query: 542 FNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+G TV G Y+CRA + G + V
Sbjct: 221 KDGTFPLPIGESVTVT-------------RDLEGTYLCRARSTQGEVTREVTVN 261
Score = 69.7 bits (170), Expect = 1e-12
Identities = 34/296 (11%), Positives = 71/296 (23%), Gaps = 54/296 (18%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARFCTRVTGY---PRPRVMWLINGHTIVNEIVR------ 1609
P P VS ++ + G +V + + +
Sbjct: 3 PATPPQLVSPRV---LEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFS 59
Query: 1610 -KITATETTEMEHKGKIQERVVDASEKPAK--------PPVFTKKIQPCRAFEQDQARFE 1660
K + + T E E ++ V+ ++ P + E + +
Sbjct: 60 AKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVK 119
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
E P + + L+++ ++ F+ A
Sbjct: 120 CE--AHPRAKVTLNGVPAQPLGPR----------AQLLLKATPEDNGRSFSCSATLEVAG 167
Query: 1721 AKCSANLVVEEKRQGGRGGVVPPSFLTTI--SSAVINVGQLARFDAKISATKPLDVYWLK 1778
N E + + P + + ++ LK
Sbjct: 168 QLIHKNQTRELR------VLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLK 221
Query: 1779 NGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
+G +P + + G Y C A + GE E + V S
Sbjct: 222 DGTFPLP-------------IGESVTVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264
Score = 65.5 bits (159), Expect = 2e-11
Identities = 40/323 (12%), Positives = 72/323 (22%), Gaps = 81/323 (25%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVG-DPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
PP+ + + L C L + +V L + L +
Sbjct: 6 PPQ----LVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAK 61
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
+++ E + C ET +
Sbjct: 62 ASVSVTAE-DEGTQRLTCAVILGNQSQETLQTVTI------------------------- 95
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGH 1601
P +V EG C +PR +V NG
Sbjct: 96 -----------------YSFPAPNVILTKPEVSEGTEVTVKC---EAHPRAKVTL--NGV 133
Query: 1602 TIVNEIVRKITATETTEMEHKGKIQERVV--DASEKPAK----------PPVFTKKIQP- 1648
R + T ++ A + K P ++ P
Sbjct: 134 PAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPG 193
Query: 1649 -CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS 1707
E Q + G+PLP +K ++ + V +
Sbjct: 194 NWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGE-------------SVTVTRDLE 240
Query: 1708 GVFAVIAENRGGKAKCSANLVVE 1730
G + A + G+ + V
Sbjct: 241 GTYLCRARSTQGEVTREVTVNVL 263
Score = 64.7 bits (157), Expect = 4e-11
Identities = 35/285 (12%), Positives = 67/285 (23%), Gaps = 71/285 (24%)
Query: 414 HIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDI- 471
+ S L+ C+L + E +V + + V +D +
Sbjct: 8 QLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL--NPTVTYGNDSFSAKASVS 65
Query: 472 AYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPK 531
+ + C + P+ +V E +V C P+
Sbjct: 66 VTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPR 125
Query: 532 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
+ ++ G R L + + + C AT +
Sbjct: 126 --AKVTLNG---VPAQPLGPRA---------QLLLKATPEDNGRSFSCSATLEVAGQ-LI 170
Query: 592 AKVICKVLTVI-----------------------------------VEWFYNGKK-LPHG 615
K + L V+ ++ +G LP G
Sbjct: 171 HKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIG 230
Query: 616 HRYR-TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
T G Y CRA + G + ++
Sbjct: 231 ESVTVTRDL---------------EGTYLCRARSTQGEVTREVTV 260
Score = 62.8 bits (152), Expect = 2e-10
Identities = 33/253 (13%), Positives = 61/253 (24%), Gaps = 48/253 (18%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD---PLPTIKWFREDFPITSSPDFQIHTFS 1692
PA PP P Q DG + D + + + +FS
Sbjct: 3 PATPPQLV---SPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFS 59
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
K+ + + E + + + + P+ ++
Sbjct: 60 AKASVSVT-AEDEGTQRLTCAVILGNQSQETLQTVTI----------YSFPAPNVILTKP 108
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGA 1812
++ G + NG P L+++A ED+G
Sbjct: 109 EVSEGTEVTVKCEAHPR----AKVTLNGVPAQPLGPR---------AQLLLKATPEDNGR 155
Query: 1813 -YECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLK--DQNVKEG 1869
+ C A + + P + E + E
Sbjct: 156 SFSCSATLEVAGQLIHKNQTRE---------------LRVLYGPRLDERDCPGNWTWPEN 200
Query: 1870 SAVTLKCRITGKP 1882
S T C+ G P
Sbjct: 201 SQQTPMCQAWGNP 213
Score = 62.0 bits (150), Expect = 3e-10
Identities = 34/337 (10%), Positives = 72/337 (21%), Gaps = 110/337 (32%)
Query: 706 APVFTVPLSNIDDLREGENAHFE---ARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF 762
P P L L P + +V + + D
Sbjct: 6 PPQLVSP----RVLEVDTQGTVVCSLDGLFPV--SEAQVHLALGDQRLN--PTVTYGNDS 57
Query: 763 GFVILEISP-VYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL---ESQLPKGMEVF 818
+S E + +C T ++ + + + + ++ +G EV
Sbjct: 58 FSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVT 117
Query: 819 I-----------------------SFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ + + ++ +SC A + +
Sbjct: 118 VKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVA------GQLIH 171
Query: 856 GKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGK 915
++ L
Sbjct: 172 KNQTRELRVLYG------------------------------------------------ 183
Query: 916 APEFL--TTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
P P + T E++ C+ +P ++ +G T+
Sbjct: 184 -PRLDERDCPGNWTWPENSQQTPMCQ--AWGNPLPELKCLKDGTFPLPIGESVTVT---- 236
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
G Y C+A + GE T + V
Sbjct: 237 ---------RDLEGTYLCRARSTQGEVTREVTVNVLS 264
Score = 58.9 bits (142), Expect = 3e-09
Identities = 24/149 (16%), Positives = 44/149 (29%), Gaps = 27/149 (18%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATKPLD---VYWLKNGKKIIPDIRYKTLEEDN 1796
V+P + +S V+ V + P+ V+ +++ P + T D+
Sbjct: 1 VLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV---TYGNDS 57
Query: 1797 LFTLLIIEAVVEDSGA--YECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEA 1854
+ ED G C + + + S
Sbjct: 58 FSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS-------------------F 98
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P L V EG+ VT+KC + +
Sbjct: 99 PAPNVILTKPEVSEGTEVTVKCEAHPRAK 127
Score = 57.0 bits (137), Expect = 1e-08
Identities = 38/330 (11%), Positives = 69/330 (20%), Gaps = 100/330 (30%)
Query: 506 LPSPSQDNLDVP---EAGK-VHFDCRLE-PKSDPTMRIDWFFNGR---PFATGSRVKTVY 557
+ + L P E C L+ ++ + P T
Sbjct: 1 VLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSA 60
Query: 558 DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV-------------- 603
D + C + T V
Sbjct: 61 KASVSVTAED----EGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEV 116
Query: 604 ----------EWFYNGKKL-PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
+ NG P G R + L + E+N + C AT +
Sbjct: 117 TVKCEAHPRAKVTLNGVPAQPLGPRAQ---------LLLKATPEDNGRSFSCSATLEVAG 167
Query: 653 DVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVP 712
+ + + +T ++ P
Sbjct: 168 QL--------------------------------------IHKNQTRELRVLYGPRLDER 189
Query: 713 LSNID-DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISP 771
+ E + +P +++ +G I E
Sbjct: 190 DCPGNWTWPENSQQTPMCQ--AWGNPLPELKCLKDGTFPLP-------------IGESVT 234
Query: 772 VYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
V + G Y CRA + GE ++ V
Sbjct: 235 VTRDLEGTYLCRARSTQGEVTREVTVNVLS 264
Score = 57.0 bits (137), Expect = 1e-08
Identities = 35/245 (14%), Positives = 59/245 (24%), Gaps = 68/245 (27%)
Query: 902 GHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
+E + P T ++E T +C P +T+ A
Sbjct: 84 NQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVKCEAHPR--AKVTLNG---VPAQPL 138
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
G R + L + + ++C AT + T + + V
Sbjct: 139 GPRAQ---------LLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRE----LRV----- 180
Query: 1022 AIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQ-DNLDVPEAGKVHFDCRLEP 1080
LY P + N PE + C +
Sbjct: 181 ----------------LY-------------GPRLDERDCPGNWTWPENSQQTPMC--QA 209
Query: 1081 KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT 1140
+P + +G TV G Y+CRA + G
Sbjct: 210 WGNPLPELKCLKDGTFPLPIGESVTVT-------------RDLEGTYLCRARSTQGEVTR 256
Query: 1141 KAKVI 1145
+ V
Sbjct: 257 EVTVN 261
Score = 54.7 bits (131), Expect = 9e-08
Identities = 29/261 (11%), Positives = 64/261 (24%), Gaps = 28/261 (10%)
Query: 144 KLLCTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDI-AYVQSHDSGEYVCQ 201
++C+L + E +V + + V +D + + + C
Sbjct: 22 TVVCSLDGLFPVSEAQVHLALGDQRL--NPTVTYGNDSFSAKASVSVTAEDEGTQRLTCA 79
Query: 202 WFVNNKPLPAGAKF--KTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHD 259
+ N+ + + E+ T V + +
Sbjct: 80 VILGNQSQETLQTVTIYSFPAPNVILTKPEVSEGTEVTVK-CEAHPRAKVTLNGVPAQPL 138
Query: 260 FGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSN 319
L + ++ ++ AT + + Y + N
Sbjct: 139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKN----QTRELRVLYGPRLDERDCPGN 194
Query: 320 LS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIED 377
+ E G+ ++ L +G TV +
Sbjct: 195 WTWPENSQQTPMCQ--AWGNPLPELKCLKDGTFPLPIGESVTV-------------TRDL 239
Query: 378 TGVYTCRATNKWGQAEISVNL 398
G Y CRA + G+ V +
Sbjct: 240 EGTYLCRARSTQGEVTREVTV 260
Score = 52.8 bits (126), Expect = 4e-07
Identities = 26/198 (13%), Positives = 48/198 (24%), Gaps = 48/198 (24%)
Query: 690 AAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKP 749
+T I AP + + EG + P + + NG P
Sbjct: 84 NQSQETLQTVTIYSFPAPNVILTKPEV---SEGTEVTVKCEAHP------RAKVTLNGVP 134
Query: 750 MKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK---RSII 806
+ L + ++ +SC A + + + + + +
Sbjct: 135 AQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRL 186
Query: 807 LESQLPKGMEV----------------------------FISFHEISPVYPEDCGQYSCR 838
E P + E V + G Y CR
Sbjct: 187 DERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTVTRDLEGTYLCR 246
Query: 839 AYNDYGEAVTSASMKVQG 856
A + GE ++ V
Sbjct: 247 ARSTQGEVTREVTVNVLS 264
Score = 51.6 bits (123), Expect = 9e-07
Identities = 37/294 (12%), Positives = 72/294 (24%), Gaps = 73/294 (24%)
Query: 1260 IPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLI 1319
+P PP+ ++ ++ V CSL F + +
Sbjct: 2 LPATPPQLVS---PRVLEVDTQGT--------------VVCSLDGLFPVSEAQVH--LAL 42
Query: 1320 FNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTI 1379
+ L+ + S+ + E C + T T++ P
Sbjct: 43 GDQRLNPTVTYGNDSFSAKASVSVT-AEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 101
Query: 1380 QLQNQ--------------------------VPKGMLKTEALIQMEA----AIKKYTSEI 1409
+ VP L A + ++A + ++
Sbjct: 102 NVILTKPEVSEGTEVTVKCEAHPRAKVTLNGVPAQPLGPRAQLLLKATPEDNGRSFSCSA 161
Query: 1410 YLTEDDLYEPEKKQ-------PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEW 1461
L + + PR + + E CQ G+P +++
Sbjct: 162 TLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQ--AWGNPLPELKC 219
Query: 1462 FLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
+G V + G YLCRA + G +
Sbjct: 220 LKDGTFPLPIGESVT-------------VTRDLEGTYLCRARSTQGEVTREVTV 260
Score = 48.1 bits (114), Expect = 1e-05
Identities = 25/198 (12%), Positives = 46/198 (23%), Gaps = 72/198 (36%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
A P + NGVP L + + D+ ++C AT + +
Sbjct: 121 EAHPR--AKVTLNGVPAQPLG--------PRAQLLLKATPEDNGRSFSCSATLEVAGQLI 170
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
E + L P+ +D P + EN
Sbjct: 171 HKNQTRE-----------------LRVLYGPRLDERDCPG-------------NWTWPEN 200
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
C+ + P +++ +G V+
Sbjct: 201 SQQTPMCQAWGN-------------------PLPELKCLKDGTFPLPIGESVTVT----- 236
Query: 184 VMDIAYVQSHDSGEYVCQ 201
G Y+C+
Sbjct: 237 --------RDLEGTYLCR 246
Score = 45.8 bits (108), Expect = 6e-05
Identities = 31/310 (10%), Positives = 63/310 (20%), Gaps = 104/310 (33%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
++ L+ + ++S+ + + + TC + T
Sbjct: 34 SEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAED-EGTQRLTCAVILGNQSQETLQT 92
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ ++ P L E E V
Sbjct: 93 VT------------------------------------IYSFPAPNVILTKPEVSEGTEV 116
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
C P + + NG P +
Sbjct: 117 TVKCEAHP-----------------------RAKVTLNGVPAQPLGPR--------AQLL 145
Query: 187 IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLK------------T 234
+ + + C K +T ++ T
Sbjct: 146 LKATPEDNGRSFSCSA-TLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQT 204
Query: 235 LV--------PFTEWFVN-NKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNS 285
+ P + + PLP G T + G Y +A ++
Sbjct: 205 PMCQAWGNPLPELKCLKDGTFPLPIGESVTVT--------------RDLEGTYLCRARST 250
Query: 286 KGSATTSGTL 295
+G T T+
Sbjct: 251 QGEVTREVTV 260
Score = 42.7 bits (100), Expect = 6e-04
Identities = 10/69 (14%), Positives = 22/69 (31%), Gaps = 13/69 (18%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
+ +P +++ K+G + + D Y C+A + GE
Sbjct: 208 QAWGNPLPELKCLKDGTFPLPIGESVT-------------VTRDLEGTYLCRARSTQGEV 254
Query: 62 VSTCTLKIE 70
T+ +
Sbjct: 255 TREVTVNVL 263
Score = 41.2 bits (96), Expect = 0.002
Identities = 22/211 (10%), Positives = 41/211 (19%), Gaps = 59/211 (27%)
Query: 927 TLAESTLAHFECRLTPTN-DPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRD 985
L T C L V + L+ + + +
Sbjct: 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVT-AEDEG 72
Query: 986 SGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELI 1045
+ TC + T +T+
Sbjct: 73 TQRLTCAVILGNQSQETLQTVTIYSFP--------------------------------- 99
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 1105
P +V E +V C P+ + ++ G R
Sbjct: 100 -------APNVILT---KPEVSEGTEVTVKCEAHPR--AKVTLNG---VPAQPLGPRA-- 142
Query: 1106 VYDFGFISLDMDYVYARDSGEYICRATNKWG 1136
L + + + C AT +
Sbjct: 143 -------QLLLKATPEDNGRSFSCSATLEVA 166
Score = 35.4 bits (81), Expect = 0.16
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 1346 VYPEDQGEYVCRAYNDHGEAFTKATIS 1372
V + +G Y+CRA + GE + T++
Sbjct: 235 VTRDLEGTYLCRARSTQGEVTREVTVN 261
>2v9t_A Roundabout homolog 1; structural protein-receptor complex,
developmental protein, domain, roundabout, chemotaxis,
LRR domain; 1.70A {Homo sapiens}
Length = 117
Score = 70.2 bits (172), Expect = 3e-14
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 1741 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDI-----RYKTLEED 1795
PP + S +++ G+ A + K + W K G+++ D L
Sbjct: 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSG 67
Query: 1796 NLFTLLIIEAVV--EDSGAYECVAMNNAGEAR-CEAELVVQS 1834
+LF L I+ D G Y CVA N GEA +A L V +
Sbjct: 68 SLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAA 109
Score = 67.5 bits (165), Expect = 2e-13
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 10/103 (9%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALS-----AGSRIKTIND 970
P + P+DL +++ A C+ P+ T+EW+ G+ + S +
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCK--AEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS 66
Query: 971 FGFVILEINDVYLR--DSGLYTCKATNKHGEATT-SCKLTVKG 1010
L I D G+Y C A N GEA + L V
Sbjct: 67 GSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAA 109
Score = 56.7 bits (137), Expect = 1e-09
Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 10/96 (10%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVY----- 1107
PP D L V + +C+ E PT I+W+ G T +
Sbjct: 9 PPRIVEHPSD-LIVSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 1108 --DFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 1141
F+ + D G Y+C A N G A++
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH 101
Score = 55.6 bits (134), Expect = 3e-09
Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 706 APVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKT-----GSRFRTFC 760
P S++ + +GE A + P +EW+ G+ ++T S
Sbjct: 9 PPRIVEHPSDLI-VSKGEPATLNCKAEG--RPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 761 DFGFVILEI--SPVYPEDCGQYSCRAYNDYGEAVT-SASMKVQG 801
L I D G Y C A N GEAV+ AS++V
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAA 109
Score = 54.0 bits (130), Expect = 1e-08
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 18/115 (15%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD---FQIHTFSTKS 1695
PP + + + A + +G P PTI+W++ + + D + S
Sbjct: 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGS 68
Query: 1696 ILIMR----QVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSF 1745
+ +R + D GV+ +A N G+A A+L V
Sbjct: 69 LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVA----------AAAHH 113
Score = 52.9 bits (127), Expect = 3e-08
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 13/111 (11%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
++ PPR V D +V + C+ G P +EW+ G+ + +
Sbjct: 5 QEDFPPRIVEH--PSDLIVSKGEPATLNCK--AEGRPTPTIEWYKGGERVETDKDDPRSH 60
Query: 1479 -------DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETR-AILKTTGKP 1521
++ + G D G Y+C A N G + A L+
Sbjct: 61 RMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAAAA 111
Score = 52.1 bits (125), Expect = 4e-08
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE 1606
L +++ P P V P V +GEPA C + G P P + W G + +
Sbjct: 2 SLRQEDFP---PRIVEHPSDLIVSKGEPATLNC-KAEGRPTPTIEWYKGGERVETD 53
Score = 51.0 bits (122), Expect = 1e-07
Identities = 23/72 (31%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
Query: 6 DPNLKIEWFKNGVPLSL-----GSRIRSTFDFGLVTLSINSLRA--DDSAIYTCKATNLL 58
P IEW+K G + S L L I R D +Y C A N L
Sbjct: 36 RPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYL 95
Query: 59 GEAVS-TCTLKI 69
GEAVS +L++
Sbjct: 96 GEAVSHDASLEV 107
Score = 48.7 bits (116), Expect = 8e-07
Identities = 20/90 (22%), Positives = 31/90 (34%), Gaps = 10/90 (11%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI-----FHKNRVKMVS 462
PP+ H L K G+ A C P +EW+ G+ + ++ ++
Sbjct: 9 PPRIVEHPSDLIVSK-GEPATLNCKAEG--RPTPTIEWYKGGERVETDKDDPRSHRMLLP 65
Query: 463 DFGFVVMDI--AYVQSHDSGEYVCRAWNNF 490
+ I D G YVC A N
Sbjct: 66 SGSLFFLRIVHGRKSRPDEGVYVCVARNYL 95
Score = 48.3 bits (115), Expect = 1e-06
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 26/100 (26%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + H +D+ + E +C+ E G P +EW+ G+ +
Sbjct: 10 PRIVEHPSDLIVSKGEPATLNCKAE---------G----------RPTPTIEWYKGGERV 50
Query: 169 -----FHKNRVKMVSDFGFVVMDI--AYVQSHDSGEYVCQ 201
++ ++ + I D G YVC
Sbjct: 51 ETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCV 90
Score = 47.9 bits (114), Expect = 2e-06
Identities = 23/102 (22%), Positives = 36/102 (35%), Gaps = 17/102 (16%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTV 556
P + H PS +L V + +C+ E PT I+W+ G T
Sbjct: 10 PRIVEH------PS--DLIVSKGEPATLNCKAE--GRPTPTIEWYKGGERVETDKDDPRS 59
Query: 557 Y-------DFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
+ F+ + D G Y+C A N G A++
Sbjct: 60 HRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSH 101
Score = 45.6 bits (108), Expect = 1e-05
Identities = 23/132 (17%), Positives = 40/132 (30%), Gaps = 31/132 (23%)
Query: 1262 EEPPRFITEIESVTVQEAEPVRFETRVE----PRV-----DPRLRVECSLSTAFFFPFIN 1312
+ PPR + + V + EP + E P + R+ + + +
Sbjct: 7 DFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPS 66
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK-ATI 1371
S L F+ + D+G YVC A N GEA + A++
Sbjct: 67 GS---------------------LFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASL 105
Query: 1372 SCKKIPTIQLQN 1383
+
Sbjct: 106 EVAAAAHHHHHH 117
Score = 42.9 bits (101), Expect = 8e-05
Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 603 VEWFYNGKKLP-----HGHRYRTFHDFGIVILDILYCY--EENSGVYECRATNKYGSDVT 655
+EW+ G+++ + L I++ + GVY C A N G V+
Sbjct: 41 IEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVS 100
Query: 656 K-ASLK 660
ASL+
Sbjct: 101 HDASLE 106
Score = 40.9 bits (96), Expect = 4e-04
Identities = 16/80 (20%), Positives = 22/80 (27%), Gaps = 21/80 (26%)
Query: 347 NGKPIEASHRIRTVHAF-----GMVVLEIL--GTKIEDTGVYTCRATNKWGQ-----AEI 394
G+ +E H + L I+ D GVY C A N G+ A +
Sbjct: 46 GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHDASL 105
Query: 395 SVNLECVDKSKGQPPKFTSH 414
V H
Sbjct: 106 EVA---------AAAHHHHH 116
Score = 37.1 bits (86), Expect = 0.009
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 1846 GAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
G+ +D P + E D V +G TL C+ G+P
Sbjct: 1 GSLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPT 38
Score = 31.3 bits (71), Expect = 0.94
Identities = 11/62 (17%), Positives = 20/62 (32%), Gaps = 7/62 (11%)
Query: 237 PFTEWFVNNKPLPAGAKFKTTH-------DFGYVALDIVGAYAEDSGIYTVKATNSKGSA 289
P EW+ + + +H ++ + D G+Y A N G A
Sbjct: 39 PTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEA 98
Query: 290 TT 291
+
Sbjct: 99 VS 100
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET
immunoglobulin superfamily, H-bonded G strand PAIR,
single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4
PDB: 1xmw_A
Length = 186
Score = 72.2 bits (176), Expect = 3e-14
Identities = 36/219 (16%), Positives = 59/219 (26%), Gaps = 45/219 (20%)
Query: 921 TTPTDLTLAES-TLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK-TINDFGFVILEI 978
+ ++ S T C L D ++W NG+ L + DF V
Sbjct: 3 AENIEYKVSISGTSVELTCPL----DSDENLKWEKNGQELPQKHDKHLVLQDFSEV---- 54
Query: 979 NDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEAL 1038
DSG Y C + K V + ++
Sbjct: 55 -----EDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAA---------------KKDD 94
Query: 1039 YRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFA 1098
+KD+ D + N Q+ G V C I W +G +
Sbjct: 95 AKKDDAKKDGSQTNKAKNLVQVD---GSRGDGSVLLTC-----GLTDKTIKWLKDGSIIS 146
Query: 1099 TGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 1137
+ K ++ G + D G Y C+ +
Sbjct: 147 PLNATKNTWNLGNNAKD-------PRGTYQCQGAKETSN 178
Score = 62.6 bits (151), Expect = 6e-11
Identities = 30/189 (15%), Positives = 47/189 (24%), Gaps = 49/189 (25%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G S C L D + ++W NG+ + K+ +V + + DSG YV
Sbjct: 14 GTSVELTCPL----DSDENLKWEKNGQELPQKHDKHLVLQ--------DFSEVEDSGYYV 61
Query: 484 CRAWN---NFIFI----------------------PPFPIFIFHQIRLPSPSQDNLDVPE 518
C N Q
Sbjct: 62 CYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRG 121
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYI 578
G V C I W +G + + K ++ G + D G Y
Sbjct: 122 DGSVLLTC-----GLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKD-------PRGTYQ 169
Query: 579 CRATNKWGT 587
C+ +
Sbjct: 170 CQGAKETSN 178
Score = 56.4 bits (135), Expect = 8e-09
Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 41/163 (25%)
Query: 347 NGKPIEASH-RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD--- 402
NG+ + H + + F +++ED+G Y C + +
Sbjct: 34 NGQELPQKHDKHLVLQDF---------SEVEDSGYYVCYTPASNKNTYLYLKARVGSADD 84
Query: 403 ----------------KSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWF 446
K G ++ ++G + S C + ++W
Sbjct: 85 AKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTC-----GLTDKTIKWL 139
Query: 447 HNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+G I N K + G D G Y C+
Sbjct: 140 KDGSIISPLNATKNTWNLGNNAKD-------PRGTYQCQGAKE 175
Score = 53.0 bits (126), Expect = 1e-07
Identities = 30/191 (15%), Positives = 59/191 (30%), Gaps = 40/191 (20%)
Query: 603 VEWFYNGKKLPHGH-RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
++W NG++LP H ++ DF V E+SG Y C +
Sbjct: 29 LKWEKNGQELPQKHDKHLVLQDFSEV---------EDSGYYVCYTPASNKN--------- 70
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
T L L++++ + +DAA + D + + D
Sbjct: 71 ---TYLYLKARVGSADDAK-------KDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSR 120
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYS 781
G+ LT ++W +G + + + + + G Y
Sbjct: 121 GDG---SVLLT-CGLTDKTIKWLKDGSIISPLNATKN-------TWNLGNNAKDPRGTYQ 169
Query: 782 CRAYNDYGEAV 792
C+ + +
Sbjct: 170 CQGAKETSNPL 180
Score = 52.2 bits (124), Expect = 2e-07
Identities = 24/192 (12%), Positives = 49/192 (25%), Gaps = 36/192 (18%)
Query: 1653 EQDQARFEVEFDG---------DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 1703
+ + ++V G D +KW + + D K +++
Sbjct: 2 DAENIEYKVSISGTSVELTCPLDSDENLKWEKNGQELPQKHD--------KHLVLQDFSE 53
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFD 1763
+EDSG + V + + + A+
Sbjct: 54 VEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNL 113
Query: 1764 AKISATKPLD------------VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSG 1811
++ ++ + WLK+G I P K T + + G
Sbjct: 114 VQVDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKN-------TWNLGNNAKDPRG 166
Query: 1812 AYECVAMNNAGE 1823
Y+C
Sbjct: 167 TYQCQGAKETSN 178
Score = 51.4 bits (122), Expect = 4e-07
Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 29/166 (17%)
Query: 239 TEWFVNNKPLPAG-AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
+W N + LP K DF V EDSG Y S + +
Sbjct: 29 LKWEKNGQELPQKHDKHLVLQDFSEV---------EDSGYYVCYTPASNKNTYLYLKARV 79
Query: 298 LERLFVNHNY-----------PLFSLQFQHLSNLSEGEIAHFEASLI-PVGDQTMTVEFL 345
+ Q NL + + + + S++ G T+++L
Sbjct: 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKTIKWL 139
Query: 346 YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 391
+G I + + G + G Y C+ +
Sbjct: 140 KDGSIISPLNATKNTWNLGNNAK-------DPRGTYQCQGAKETSN 178
Score = 50.6 bits (120), Expect = 7e-07
Identities = 27/197 (13%), Positives = 47/197 (23%), Gaps = 48/197 (24%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
D + ++W KNG L + +DS Y C
Sbjct: 23 LDSDENLKWEKNGQELPQKHDKHLVLQ--------DFSEVEDSGYYVCYTPASNKNTYLY 74
Query: 65 CTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENE 124
++ + +D K + +KD + + + +
Sbjct: 75 LKARVGS-------ADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGS--- 124
Query: 125 NVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 184
V C + ++W +G I N K + G
Sbjct: 125 -VLLTC----------------------GLTDKTIKWLKDGSIISPLNATKNTWNLGNNA 161
Query: 185 MDIAYVQSHDSGEYVCQ 201
D G Y CQ
Sbjct: 162 KD-------PRGTYQCQ 171
Score = 47.2 bits (111), Expect = 1e-05
Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 14/116 (12%)
Query: 1773 DVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGE------ARC 1826
++ W KNG+++ P K L + + VEDSG Y C + AR
Sbjct: 28 NLKWEKNGQEL-PQKHDKHLVLQDF-------SEVEDSGYYVCYTPASNKNTYLYLKARV 79
Query: 1827 EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ + A A A + ++ + +V L C +T K
Sbjct: 80 GSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDKT 135
Score = 44.9 bits (105), Expect = 7e-05
Identities = 23/195 (11%), Positives = 43/195 (22%), Gaps = 70/195 (35%)
Query: 509 PSQDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
V +G V C L+ + + W NG+ V D
Sbjct: 3 AENIEYKVSISGTSVELTCPLDSDEN----LKWEKNGQELPQKHDKHLVLQ--------D 50
Query: 568 YVYARDSGEYICRATNKWGTAM-------------------------------------- 589
+ DSG Y+C
Sbjct: 51 FSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKA 110
Query: 590 ------------TKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEE 637
+ C + ++W +G + + + + G D
Sbjct: 111 KNLVQVDGSRGDGSVLLTCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKDP------ 164
Query: 638 NSGVYECRATNKYGS 652
G Y+C+ + +
Sbjct: 165 -RGTYQCQGAKETSN 178
Score = 42.6 bits (99), Expect = 4e-04
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 36/161 (22%)
Query: 1344 DYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIK 1403
D+ ED G YVC + + L +A + K
Sbjct: 50 DFSEVEDSGYYVCYTPASNKNTY-----------------------LYLKARVGSADDAK 86
Query: 1404 KYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFL 1463
K ++ + D + + Q + ++ + S C G + ++W
Sbjct: 87 KDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGD-GSVLLTC-----GLTDKTIKWLK 140
Query: 1464 NGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATN 1504
+G + N + N G + G Y C+
Sbjct: 141 DGSIISPLNATKNTW-------NLGNNAKDPRGTYQCQGAK 174
Score = 41.8 bits (97), Expect = 7e-04
Identities = 27/180 (15%), Positives = 47/180 (26%), Gaps = 54/180 (30%)
Query: 144 KLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC--- 200
+L C L D + ++W NG+ + K+ +V + + DSG YVC
Sbjct: 18 ELTCPL----DSDENLKWEKNGQELPQKHDKHLVLQ--------DFSEVEDSGYYVCYTP 65
Query: 201 -----------------------------QWFVNNKPLPAGAKF-KTTHDFGYVALDIEL 230
+ K + K D +
Sbjct: 66 ASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSV 125
Query: 231 MLKTLVPFTE--WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGS 288
+L + W + + K T + G A D G Y + +
Sbjct: 126 LLTCGLTDKTIKWLKDGSIISPLNATKNTWNLGNNAKD-------PRGTYQCQGAKETSN 178
Score = 40.2 bits (93), Expect = 0.002
Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
+ I+W K+G +S + ++T++ G D Y C+
Sbjct: 132 TDKTIKWLKDGSIISPLNATKNTWNLGNNAK-------DPRGTYQCQGAK 174
Score = 39.9 bits (92), Expect = 0.003
Identities = 31/173 (17%), Positives = 53/173 (30%), Gaps = 34/173 (19%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
S + C L D + ++W NG+ LP K+ + + +F V EDSG Y+C
Sbjct: 15 TSVELTCPL----DSDENLKWEKNGQELPQKHDKHLVLQ------DFSEV--EDSGYYVC 62
Query: 1501 RATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPK 1560
L + G +++ K K + + Q + +
Sbjct: 63 YTPA----SNKNTYLYLKARVGSADDAKKDAAKKDDAK----KDDAKKDGSQTNKAKNLV 114
Query: 1561 EAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKIT 1612
+ + C G + WL +G I K T
Sbjct: 115 QVDG---------SRGDGSVLLTC----GLTDKTIKWLKDGSIISPLNATKNT 154
Score = 37.5 bits (86), Expect = 0.019
Identities = 25/184 (13%), Positives = 46/184 (25%), Gaps = 39/184 (21%)
Query: 1567 SQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKG--- 1623
E + G + + W NG + + + + + +E+E G
Sbjct: 4 ENIEYKVSISGTSVELTCPL--DSDENLKWEKNGQELPQKHDKHLVLQDFSEVEDSGYYV 61
Query: 1624 --------------KIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQ------ARFEVEF 1663
K + D ++K A KK + Q
Sbjct: 62 CYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRG 121
Query: 1664 DG-------DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 1716
DG TIKW ++ I+ TK+ + + G +
Sbjct: 122 DGSVLLTCGLTDKTIKWLKDGSIISPLNA-------TKNTWNLGNNAKDPRGTYQCQGAK 174
Query: 1717 RGGK 1720
Sbjct: 175 ETSN 178
Score = 35.6 bits (81), Expect = 0.068
Identities = 17/117 (14%), Positives = 35/117 (29%), Gaps = 16/117 (13%)
Query: 1072 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 1131
V C L+ + + W NG+ V D+ DSG Y+C
Sbjct: 17 VELTCPLDSDEN----LKWEKNGQELPQKHDKHLVLQ--------DFSEVEDSGYYVCYT 64
Query: 1132 TNKWGTAMTKAKVICKAKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIPEEP 1188
+ KA+ +++ + + K+ K + + + +
Sbjct: 65 PAS----NKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVD 117
Score = 31.0 bits (69), Expect = 2.8
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 8/51 (15%)
Query: 736 DPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYN 786
D ++W NG+ + V+ + S V ED G Y C
Sbjct: 24 DSDENLKWEKNGQELPQKHDKH------LVLQDFSEV--EDSGYYVCYTPA 66
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1
(isoform 2); hydrolase, immunoglobulin domain, nucleus,
protease; 1.15A {Homo sapiens}
Length = 91
Score = 68.9 bits (169), Expect = 3e-14
Identities = 16/95 (16%), Positives = 27/95 (28%), Gaps = 11/95 (11%)
Query: 914 GKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
G + PT L + +C P +WF N L+ ++
Sbjct: 1 GSKLQICVEPTSQKLMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHETK--------- 49
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + V L G Y C N + +
Sbjct: 50 KLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 84
Score = 63.1 bits (154), Expect = 3e-12
Identities = 14/94 (14%), Positives = 31/94 (32%), Gaps = 10/94 (10%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 1698
+ + + G P+P +WF+ + P+T TK + +
Sbjct: 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTH---------ETKKLYM 53
Query: 1699 MRQVFMEDSGVFAVIAENRGGKAKCS-ANLVVEE 1731
+ V +E G + N ++++E
Sbjct: 54 VPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDE 87
Score = 62.4 bits (152), Expect = 6e-12
Identities = 11/91 (12%), Positives = 22/91 (24%), Gaps = 9/91 (9%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLL 1801
+S + G + W KN L + +
Sbjct: 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELP---------LTHETKKLYM 53
Query: 1802 IIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
+ +E G Y C N+ + ++
Sbjct: 54 VPYVDLEHQGTYWCHVYNDRDSQDSKKVEII 84
Score = 59.7 bits (145), Expect = 6e-11
Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 12/89 (13%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI 766
V ++ L G + P +WF N P+ ++ +
Sbjct: 4 LQICVEPTSQK-LMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHETKK---------L 51
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSA 795
+ V E G Y C YND +
Sbjct: 52 YMVPYVDLEHQGTYWCHVYNDRDSQDSKK 80
Score = 59.7 bits (145), Expect = 6e-11
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 12/85 (14%)
Query: 406 GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG 465
G + S + L G + +C P +WF N P+ H+ + +
Sbjct: 1 GSKLQICVEPTSQK-LMPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETKKLYM---- 53
Query: 466 FVVMDIAYVQSHDSGEYVCRAWNNF 490
+ YV G Y C +N+
Sbjct: 54 -----VPYVDLEHQGTYWCHVYNDR 73
Score = 57.7 bits (140), Expect = 3e-10
Identities = 19/93 (20%), Positives = 31/93 (33%), Gaps = 14/93 (15%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
+ + Q + + +C VG P +WF N PL H+ +Y Y
Sbjct: 3 KLQICVE--PTSQKLMPGSTLVLQCV--AVGSPIPHYQWFKNELPLTHET--KKLYMVPY 56
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
V E G Y C N +++ +
Sbjct: 57 VD-------LEHQGTYWCHVYNDRDSQDSKKVE 82
Score = 57.7 bits (140), Expect = 3e-10
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 9/59 (15%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P +WFKN +PL+ ++ + + + Y C N S
Sbjct: 30 SPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQDSK 79
Score = 57.0 bits (138), Expect = 5e-10
Identities = 14/93 (15%), Positives = 22/93 (23%), Gaps = 12/93 (12%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
+ + + C P WF N P ++
Sbjct: 3 KLQICVEPTS-QKLMPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETKK--------- 50
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ YV G Y C N + +K I
Sbjct: 51 LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEI 83
Score = 51.2 bits (123), Expect = 5e-08
Identities = 9/41 (21%), Positives = 13/41 (31%)
Query: 1563 PVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTI 1603
+P +QK+ G G P P W N +
Sbjct: 4 LQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPL 44
Score = 50.4 bits (121), Expect = 1e-07
Identities = 14/83 (16%), Positives = 22/83 (26%), Gaps = 11/83 (13%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR 572
+ + + C P WF N P ++ + YV
Sbjct: 12 SQKLMPGSTLVLQCVAV--GSPIPHYQWFKNELPLTHETKK---------LYMVPYVDLE 60
Query: 573 DSGEYICRATNKWGTAMTKAKVI 595
G Y C N + +K I
Sbjct: 61 HQGTYWCHVYNDRDSQDSKKVEI 83
Score = 44.6 bits (106), Expect = 1e-05
Identities = 15/98 (15%), Positives = 23/98 (23%), Gaps = 30/98 (30%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+ + C G P +WF N P+
Sbjct: 4 LQICVEPTSQKLMPGSTLVLQCVAV---------G----------SPIPHYQWFKNELPL 44
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNN 206
H+ + + + YV G Y C V N
Sbjct: 45 THETKKLYM---------VPYVDLEHQGTYWCH--VYN 71
Score = 43.9 bits (104), Expect = 2e-05
Identities = 17/107 (15%), Positives = 25/107 (23%), Gaps = 28/107 (26%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFC 1323
+ E S + + + P + F N
Sbjct: 3 KLQICVEPTSQKLMPGSTLVLQCVAV--GSPIPHYQW---------FKN----------- 40
Query: 1324 LHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
P+ + YV E QG Y C YND +K
Sbjct: 41 ------ELPLTHETKKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKV 81
Score = 42.7 bits (101), Expect = 6e-05
Identities = 11/55 (20%), Positives = 14/55 (25%), Gaps = 9/55 (16%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
WF N PL K + E G Y N + S +
Sbjct: 37 WFKNELPLTHETKKL---------YMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 82
Score = 39.6 bits (93), Expect = 6e-04
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSA 850
+ V E G Y C YND +
Sbjct: 54 VPYVDLEHQGTYWCHVYNDRDSQDSKK 80
Score = 39.6 bits (93), Expect = 6e-04
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 9/57 (15%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+WF N L H + + + Y E+ G Y C N S +K
Sbjct: 35 YQWFKNELPLTHETKK---------LYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVE 82
Score = 39.2 bits (92), Expect = 8e-04
Identities = 7/47 (14%), Positives = 13/47 (27%), Gaps = 9/47 (19%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
N P+ + + + +E G Y C N +
Sbjct: 40 NELPLTHETK---------KLYMVPYVDLEHQGTYWCHVYNDRDSQD 77
Score = 34.6 bits (80), Expect = 0.039
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ Q + GS + L+C G P
Sbjct: 4 LQICVEPTSQKLMPGSTLVLQCVAVGSP 31
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 76.2 bits (187), Expect = 1e-13
Identities = 101/624 (16%), Positives = 176/624 (28%), Gaps = 219/624 (35%)
Query: 1234 LPDSM--SAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRF----ETR 1287
+P + A +L+E PE E +EP T E V +F +
Sbjct: 22 VPTASFFIASQLQEQFNKILPEPTEGFAADDEP---TTPAELVG-------KFLGYVSSL 71
Query: 1288 VEP-RVDPRLRVECSLSTAF-FFPFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDY 1345
VEP +V +V L+ F +L N +HA+ L +
Sbjct: 72 VEPSKVGQFDQV---LNLCLTEF-----ENCYLEGN-DIHALA----------AKLLQEN 112
Query: 1346 VYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKY 1405
+ + + + Y A A K L V +G A +
Sbjct: 113 DTTLVKTKELIKNYI---TARIMAKRPFDKKSNSALFRAVGEG----------NAQL--V 157
Query: 1406 T-------SEIYLTE-DDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNM 1457
++ Y E DLY+ V L++ + +L
Sbjct: 158 AIFGGQGNTDDYFEELRDLYQT----YHVLV------GDLIKFSAETLS-ELIR------ 200
Query: 1458 KVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWV-YPED--SGEYLCRAT----------- 1503
++ G + W+ P + +YL
Sbjct: 201 ------------TTLDAEKVFTQGLNILE--WLENPSNTPDKDYLLSIPISCPLIGVIQL 246
Query: 1504 -------NLYGMD--ETRAILK--TTGKPGII----------YESQLPKGMKSIEK---- 1538
L G E R+ LK T G++ +ES K+I
Sbjct: 247 AHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFI 306
Query: 1539 -IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCT---RVTGYPRPRV 1594
+R ++ P + P + ++ + EG P + ++ + +V
Sbjct: 307 GVR----CYEAYPNTSLP-------PSILE--DSLENNEGVP----SPMLSISNLTQEQV 349
Query: 1595 ------------------MWLINGHT--IV----------NEIVRKITATETTEMEHKGK 1624
+ L+NG +V N +RK A G
Sbjct: 350 QDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAP-------SGL 402
Query: 1625 IQERVVDASEKPAK-----P---PVFTKKIQPCRA-FEQDQARFEVEFDGDPLPTIKWFR 1675
Q R+ + K P P + + P +D + V F+ +
Sbjct: 403 DQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDI------- 455
Query: 1676 EDFPI--TSS-PDFQIHTFS-TKSI--LIMRQ-VFMEDSGVFA---VIAENRGGKAKCSA 1725
P+ T D ++ + S ++ I I+R V E + F ++ GG +
Sbjct: 456 -QIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLG- 513
Query: 1726 NLVVEEKRQGGRG-GVVPPSFLTT 1748
L K G G V+ L
Sbjct: 514 VLTHRNKD--GTGVRVIVAGTLDI 535
Score = 70.5 bits (172), Expect = 6e-12
Identities = 98/582 (16%), Positives = 147/582 (25%), Gaps = 238/582 (40%)
Query: 689 DAAHLR--RTETADIEHRQAPVFTVP---LSNIDDLREGENAHFEARL-TPT------DD 736
DA R +EH V VP L+E F L PT D+
Sbjct: 2 DAYSTRPLTLSHGSLEH----VLLVPTASFFIASQLQE----QFNKILPEPTEGFAADDE 53
Query: 737 PKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSAS 796
P E +F G+V S V P GQ+ + V +
Sbjct: 54 PTTPAELV---------GKF-----LGYVS---SLVEPSKVGQF---------DQVLNLC 87
Query: 797 MKVQGKRSIILESQLPKGMEVFISFHEISPVYPED------CGQYSCRAYNDYGEAVTSA 850
+ E+ +G ++ H ++ ++ + + Y + +
Sbjct: 88 LT-------EFENCYLEGNDI----HALAAKLLQENDTTLVKTKELIKNY--ITARIMAK 134
Query: 851 SMKVQGKRSIILES--------------QLPKGMEGTIDK-IAEL----EGYGHEREDRT 891
+ S + + Q G D EL + Y D
Sbjct: 135 RPFDKKSNSALFRAVGEGNAQLVAIFGGQ------GNTDDYFEELRDLYQTYHVLVGD-L 187
Query: 892 IDKIAE-LEGYGHEREDR---------IEEDLGKAPEFLTTPTDLTLAEST--------- 932
I AE L D I E L + P TP L
Sbjct: 188 IKFSAETLSELIRTTLDAEKVFTQGLNILEWL-ENPS--NTPDKDYLLSIPISCPLIGVI 244
Query: 933 -LAHFE--CR---LTPTND-------------------PSMTVEW--FHNG--KALSA-- 961
LAH+ + TP + T W F KA++
Sbjct: 245 QLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF 304
Query: 962 --GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG--------- 1010
G R + L + + DS ++ E S L++
Sbjct: 305 FIGVRCY--EAYPNTSLPPSIL--EDSL--------ENNEGVPSPMLSISNLTQEQVQDY 352
Query: 1011 ----RQGIDVEPQVSAIFANATKNI---------QKLEEALYRK----DEL----IP-DE 1048
+ QV N KN+ L L RK L IP E
Sbjct: 353 VNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTL-RKAKAPSGLDQSRIPFSE 411
Query: 1049 EKPNP-----PV---FTSQL---------QD-----------NLDVP----EAGKVHFDC 1076
K PV F S L +D ++ +P G D
Sbjct: 412 RKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGS---DL 468
Query: 1077 RLEPKSDP--------TMRIDWFFNGRPFATGSRVKTVYDFG 1110
R+ S + + W T + + DFG
Sbjct: 469 RVLSGSISERIVDCIIRLPVKW-----ETTTQFKATHILDFG 505
Score = 50.0 bits (119), Expect = 9e-06
Identities = 57/368 (15%), Positives = 103/368 (27%), Gaps = 139/368 (37%)
Query: 1205 YDSELSEYQK---ERANESTELEKH-----DIVTESQLPDSM----SAEKLKELEKNYTP 1252
Y + S+ + RA+ + + + DIV + P ++ EK K + +NY+
Sbjct: 1636 YKT--SKAAQDVWNRADNHFK-DTYGFSILDIVINN--PVNLTIHFGGEKGKRIRENYSA 1690
Query: 1253 --EEIEEDEIPEEPPRF--ITE-IESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFF 1307
E D + F I E S T F + S T F
Sbjct: 1691 MIFETIVDGKLKTEKIFKEINEHSTSYT--------FR-------SEK--GLLSA-TQF- 1731
Query: 1308 FPFINIST--AFLIFNFCLHAVIFSHPIFDLGFV----SLDIDYVYPEDQGEY---VCRA 1358
T A + + S + SL GEY A
Sbjct: 1732 -------TQPALTLMEKAAFEDLKSKGLIPADATFAGHSL----------GEYAALASLA 1774
Query: 1359 YNDHGEAFT-KATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEIYLTEDDLY 1417
+ + ++ + + +Q VP+ L + M AI +++ L
Sbjct: 1775 -----DVMSIESLVEVVFYRGMTMQVAVPRDELG-RSNYGM-IAINPGRVAASFSQEALQ 1827
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN-P 1476
V ++ + T + ++ N +N
Sbjct: 1828 Y--------VVERVGKR--------TGWLVEIV---------------------N-YNVE 1849
Query: 1477 IYDFG--YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMK 1534
YVA +G+ L +D +L I +L K +
Sbjct: 1850 ----NQQYVA----------AGD-------LRALDTVTNVLNFIKLQKIDI-IELQKSL- 1886
Query: 1535 SIEKIREM 1542
S+E++
Sbjct: 1887 SLEEVEGH 1894
Score = 45.0 bits (106), Expect = 3e-04
Identities = 64/418 (15%), Positives = 132/418 (31%), Gaps = 119/418 (28%)
Query: 1524 IYESQLPKGMKSIEKIREMEASWQHTP-EQLVEDEKPKEAPVFVSQPE---------AQK 1573
SQL +E P E D++P + E +
Sbjct: 28 FIASQL----------QEQFNKILPEPTEGFAADDEPT------TPAELVGKFLGYVSSL 71
Query: 1574 VQEGEPARFC---TRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGKIQE--- 1627
V+ + +F + + H + ++ + +TT ++ K I+
Sbjct: 72 VEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKL---LQENDTTLVKTKELIKNYIT 128
Query: 1628 -RVV--DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEF--DGDPLPTIKWFREDFPITS 1682
R++ +K + +F RA + A+ F G+ T +F E
Sbjct: 129 ARIMAKRPFDKKSNSALF-------RAVGEGNAQLVAIFGGQGN---TDDYFEE------ 172
Query: 1683 SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRG---- 1738
+ + T +L+ ++ S ++E ++ ++ +G
Sbjct: 173 ---LR-DLYQTYHVLV--GDLIKFSA--ETLSE--------LIRTTLDAEKVFTQGLNIL 216
Query: 1739 ------GVVPP-SFLTT--ISSAVINVGQLARF--DAKISATKPLDVYWLKNGKKIIPDI 1787
P +L + IS +I V QLA + AK+ P ++ +
Sbjct: 217 EWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELR---------SYL 267
Query: 1788 RYKTLEEDNLFTLLIIEAVVEDSGAYECV--AMNNA---GEARC-EA-------ELVVQS 1834
+ T L T + I + V A+ G RC EA +++
Sbjct: 268 KGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIG-VRCYEAYPNTSLPPSILED 326
Query: 1835 KKAPGKQAPAPGAAVAQDEAPTVAEPLKDQN--VKEGSAV--TLKC--R---ITGKPR 1883
+ P+P +++ V + + N + G V +L + ++G P+
Sbjct: 327 SLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQ 384
Score = 42.3 bits (99), Expect = 0.002
Identities = 51/371 (13%), Positives = 95/371 (25%), Gaps = 148/371 (39%)
Query: 1527 SQLPKGM-----KSIEKIREMEASW----QHTPEQL------VEDEKPKEAPVFVSQPEA 1571
SQ +GM K+ + +++ W H + + P + +
Sbjct: 1626 SQE-QGMGMDLYKTSKAAQDV---WNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKG 1681
Query: 1572 QKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM-EHKGKIQERVV 1630
++++E A + +G +I ++I T+ ++ ++
Sbjct: 1682 KRIRENYSAMIFETIV-----------DGKLKTEKIFKEINEHSTSYTFRS----EKGLL 1726
Query: 1631 DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 1690
A++ FT QP +T
Sbjct: 1727 SATQ-------FT---QPA------------------------------LT--------- 1737
Query: 1691 FSTKSILIMRQVFMEDSGVF---AVIA-----ENRGGKAKCSANLVVEEKRQGGRGGVVP 1742
++ G+ A A E +A L V+
Sbjct: 1738 --LMEKAAFED--LKSKGLIPADATFAGHSLGEY-------AA-LA-------SLADVMS 1778
Query: 1743 PSFLTTISSAVINV---GQLARFDAKISATKPLDVYWLKNGK--KIIPDIRYKTLEEDNL 1797
I S V V G + P D N I P + ++ L
Sbjct: 1779 ------IESLVEVVFYRGMTMQVAV------PRDELGRSNYGMIAINPGRVAASFSQEAL 1826
Query: 1798 FTLLIIEAVVEDSGAYECVAMN-NAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPT 1856
++E V + +G + N N +Q A G A D
Sbjct: 1827 --QYVVERVGKRTGWLVEIV-NYNV----------------ENQQYVAAGDLRALDTVTN 1867
Query: 1857 VAEPLKDQNVK 1867
V +K Q +
Sbjct: 1868 VLNFIKLQKID 1878
Score = 37.7 bits (87), Expect = 0.053
Identities = 81/514 (15%), Positives = 136/514 (26%), Gaps = 191/514 (37%)
Query: 1044 LIPDEEKPNPPVFTSQLQD----NLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT 1099
L+P SQLQ+ L P G D EP + +
Sbjct: 21 LVP----TASFFIASQLQEQFNKILPEPTEGFAADD---EPTTPAEL------------- 60
Query: 1100 GSRVKTVYDF-GFISLDMDYVYARDSGEY---ICRATNKWGTAMTKAKVICKAKHDIVTE 1155
V F G++S V G++ + ++ + I H + +
Sbjct: 61 ------VGKFLGYVS---SLVEPSKVGQFDQVLNLCLTEFENCYLEGNDI----HALAAK 107
Query: 1156 SQLPDSMSAEKLKELEKNYTP--EEIEEDEIPEEPPRLNQSRYKK----------Q-NQS 1202
+ + K KEL KNY + + L ++ + Q N
Sbjct: 108 LLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTD 167
Query: 1203 AWYDSELSE-YQKERANESTELEKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIP 1261
+++ EL + YQ D++ SAE L EL +
Sbjct: 168 DYFE-ELRDLYQTYHVL------VGDLIKF-------SAETLSELIRT-----------T 202
Query: 1262 EEPPRFITE---IESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFF-FPFINISTAF 1317
+ + T+ I ++ P D L + P I +
Sbjct: 203 LDAEKVFTQGLNILEW-LENPSNT-------PDKD-------YLLSIPISCPLIGV-IQL 246
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCR---------AYNDHGEAFTK 1368
H V+ + LG + +G A D E+F
Sbjct: 247 ------AHYVVTAK---LLG---FTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFV 294
Query: 1369 ATIS-----------CKK------IPTIQLQNQVPKG------ML--KTEALIQMEAAIK 1403
+ C + +P L++ + ML Q++ +
Sbjct: 295 SVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVN 354
Query: 1404 KYTSEIYLTEDDLYEPEKKQ----------------PPR----FVTQIKTQDQLVEMQST 1443
K T L P KQ PP+ + +
Sbjct: 355 K-------TNSHL--PAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTL---------RKA 396
Query: 1444 KFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
K AP G ++ F K NRF P+
Sbjct: 397 K-----APSGLDQSRIP-FSERKLKFS-NRFLPV 423
Score = 36.6 bits (84), Expect = 0.10
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 59/191 (30%)
Query: 762 FGFVILEISPVYPEDC-----GQYSCRAYNDYG----EAVTSASMKV--------QGKRS 804
+GF IL+I P + G+ R +Y E + +K + S
Sbjct: 1657 YGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTS 1716
Query: 805 IILESQLPKG--------------MEVFISFHEISP--VYPEDC-------GQYS---CR 838
S KG ME F ++ + P D G+Y+
Sbjct: 1717 YTFRS--EKGLLSATQFTQPALTLMEKAA-FEDLKSKGLIPADATFAGHSLGEYAALASL 1773
Query: 839 AYNDYGEAVT-SASMKVQGKRSIILESQLPKGMEGT-------IDKIAELEGYGHEREDR 890
A + ++ + ++V R + ++ +P+ G I+ + E
Sbjct: 1774 A-----DVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQY 1828
Query: 891 TIDKIAELEGY 901
++++ + G+
Sbjct: 1829 VVERVGKRTGW 1839
Score = 36.6 bits (84), Expect = 0.11
Identities = 69/431 (16%), Positives = 118/431 (27%), Gaps = 201/431 (46%)
Query: 855 QGKRSIILESQLPKGMEGTIDKIAELEGYGHE---RE--DRTIDKIAELEGYGHEREDRI 909
QG SQ +GM G ++ Y ++ +R D + + YG D +
Sbjct: 1624 QG-------SQE-QGM-G-------MDLYKTSKAAQDVWNR-ADNHFK-DTYGFSILDIV 1665
Query: 910 EEDLGKAPEFLTTPTDLTLAESTLAHF---ECRLTPTNDPSMTVEWFHNGKALSAGSRIK 966
+ P +LT+ HF + + N +M E +GK + K
Sbjct: 1666 INN----------PVNLTI------HFGGEKGKRIRENYSAMIFETIVDGKLKTE----K 1705
Query: 967 TINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFAN 1026
+ + + GL AT + T Q P A+
Sbjct: 1706 IFKEINEHSTSY--TFRSEKGL--LSAT----QFT----------Q-----P---ALTL- 1738
Query: 1027 ATKNIQKLEEALYR--KDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDP 1084
+E+A + K + + P F AG H
Sbjct: 1739 -------MEKAAFEDLKSKGL----IPADATF------------AG--H----------- 1762
Query: 1085 TMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEY---ICRATNKWGTAMT- 1140
SL GEY A M+
Sbjct: 1763 ----------------------------SL----------GEYAALASLA----D-VMSI 1779
Query: 1141 --KAKVIC---KAKHDIVTESQLPDS---MSAEKLKELEKNYTPEEIEE--DEIPEEPPR 1190
+V+ V +L S M A + +++ E ++ + + +
Sbjct: 1780 ESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGW 1839
Query: 1191 L----NQSRYKKQNQSAWYDSELSEYQ-----KERA-NESTELEKH------DIVTESQL 1234
L N Y +NQ Q RA + T + DI+ +L
Sbjct: 1840 LVEIVN---YNVENQ-----------QYVAAGDLRALDTVTNVLNFIKLQKIDII---EL 1882
Query: 1235 PDSMSAEKLKE 1245
S+S E+++
Sbjct: 1883 QKSLSLEEVEG 1893
Score = 36.2 bits (83), Expect = 0.14
Identities = 52/263 (19%), Positives = 84/263 (31%), Gaps = 79/263 (30%)
Query: 71 DRHWL--LNKSLR------PDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKE 122
D H+ S+ P L + EK K +R++ ++F++ V D +
Sbjct: 1650 DNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIV------D-GKLK 1702
Query: 123 NENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH--KNRVKMVSDF 180
E + F E S T + K L + T P L K F K++
Sbjct: 1703 TEKI-FKEINEHSTSYTFRSEKGLLSATQFTQPAL----TLMEKAAFEDLKSK------- 1750
Query: 181 GFVVMDIAYVQSHDS-GEY---VCQWFVNNKPLPAGAKFKTTHDFGYVALDIE------- 229
G + D A H S GEY A + IE
Sbjct: 1751 GLIPAD-ATFAGH-SLGEYAALASL---------ADV------------MSIESLVEVVF 1787
Query: 230 ---LMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALD-IVGAYAEDSG----I--YT 279
+ ++ VP E +N + A + F AL +V + +G I Y
Sbjct: 1788 YRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNY- 1846
Query: 280 VKATNSKGSAT-TSGTLKCLERL 301
N + +G L+ L+ +
Sbjct: 1847 ----NVENQQYVAAGDLRALDTV 1865
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Length = 182
Score = 69.9 bits (171), Expect = 2e-13
Identities = 23/183 (12%), Positives = 53/183 (28%), Gaps = 39/183 (21%)
Query: 1665 GDPLPTIKWFREDFPITS----------SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 1714
D + IKW + F ++ I + + +D ++ V
Sbjct: 27 SDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKI-KHLKTDDQDIYKVSI 85
Query: 1715 ENRGGKAKCSA--NLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL 1772
+ GK +L ++E+ V P T + + ++
Sbjct: 86 YDTKGKNVLEKIFDLKIQER-------VSKPKISWTCINTTLTC--------EVMNGTDP 130
Query: 1773 DVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
++ ++GK + R ++ + S ++C A N + +
Sbjct: 131 ELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKVSKESSVEPVSC 179
Query: 1833 QSK 1835
K
Sbjct: 180 PEK 182
Score = 68.8 bits (168), Expect = 4e-13
Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 33/186 (17%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNG------------KPIFHKNRVKMVSDFGFVVMDI 471
G + + ++D ++W + K+ K+ + + I
Sbjct: 14 GQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKI 70
Query: 472 AYVQSHDSGEYVCRAWNNFIFIPPFPIFIFH-QIRLPSPSQDNLDVPEAGKVHFDCRLEP 530
++++ D Y ++ IF Q R+ P C +
Sbjct: 71 KHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPK----ISWTCINTTLTCEVMN 126
Query: 531 KSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMT 590
+DP ++ + +G+ RV T S ++ C A NK +
Sbjct: 127 GTDPE--LNLYQDGKHLKLSQRVIT------HKWTTS-----LSAKFKCTAGNKVSKESS 173
Query: 591 KAKVIC 596
V C
Sbjct: 174 VEPVSC 179
Score = 68.4 bits (167), Expect = 5e-13
Identities = 29/225 (12%), Positives = 54/225 (24%), Gaps = 68/225 (30%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK---------TINDFGFVILEINDVYLR 984
+ + +D ++W K T F L+I +
Sbjct: 17 INLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTD 76
Query: 985 DSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDEL 1044
D +Y + G+ +K ++ +VS
Sbjct: 77 DQDIYKVSIYDTKGKNVLEKIFDLK------IQERVS----------------------- 107
Query: 1045 IPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK 1104
P + C + +DP ++ + +G+ RV
Sbjct: 108 --------KPKISW---------TCINTTLTCEVMNGTDPE--LNLYQDGKHLKLSQRVI 148
Query: 1105 TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAK 1149
T S ++ C A NK + V C K
Sbjct: 149 T------HKWTTS-----LSAKFKCTAGNKVSKESSVEPVSCPEK 182
Score = 62.6 bits (152), Expect = 5e-11
Identities = 24/158 (15%), Positives = 47/158 (29%), Gaps = 35/158 (22%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
D+ +F + + + F L+I K +D +Y + G+ +
Sbjct: 39 SDKKKIAQFRKEKETFKEKDTYKL---FKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLE 95
Query: 396 VN-----LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK 450
E V K PK + + C + N + ++ + +GK
Sbjct: 96 KIFDLKIQERVSK-----PKISW---------TCINTTLTCEVM--NGTDPELNLYQDGK 139
Query: 451 PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ RV + S ++ C A N
Sbjct: 140 HLKLSQRVITHK-----------WTTSLSAKFKCTAGN 166
Score = 62.2 bits (151), Expect = 7e-11
Identities = 25/182 (13%), Positives = 48/182 (26%), Gaps = 51/182 (28%)
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGR------------PFATGSRVKTVYDFGFISLDMD 567
++ D SD I W F K ++ G +L +
Sbjct: 15 QDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK-LFKNG--TLKIK 71
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI----------------------CKVL---TVI 602
++ D Y + G + + C+V+
Sbjct: 72 HLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDPE 131
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ + +GK L R ++ S ++C A NK + + + C
Sbjct: 132 LNLYQDGKHLKLSQR--------VITHKWT---TSLSAKFKCTAGNKVSKESSVEPVSCP 180
Query: 663 SK 664
K
Sbjct: 181 EK 182
Score = 57.6 bits (139), Expect = 3e-09
Identities = 18/172 (10%), Positives = 49/172 (28%), Gaps = 39/172 (22%)
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNG------------KPMKTGSRFRTFCDFGFVILEI 769
G++ + + D ++W + K ++ F + L+I
Sbjct: 14 GQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKI 70
Query: 770 SPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR------------SIILESQLPKGMEV 817
+ +D Y Y+ G+ V ++ + + L ++ G +
Sbjct: 71 KHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTCINTTLTCEVMNGTDP 130
Query: 818 FISFHE------------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
++ ++ ++ C A N + + + K
Sbjct: 131 ELNLYQDGKHLKLSQRVITHKWTTSLSAKFKCTAGNKVSKESSVEPVSCPEK 182
Score = 54.5 bits (131), Expect = 3e-08
Identities = 12/82 (14%), Positives = 24/82 (29%), Gaps = 13/82 (15%)
Query: 930 ESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLY 989
C + N + + +GK L R+ T S +
Sbjct: 114 TCINTTLTCEVM--NGTDPELNLYQDGKHLKLSQRVITHK-----------WTTSLSAKF 160
Query: 990 TCKATNKHGEATTSCKLTVKGR 1011
C A NK + ++ ++ +
Sbjct: 161 KCTAGNKVSKESSVEPVSCPEK 182
Score = 53.3 bits (128), Expect = 7e-08
Identities = 21/203 (10%), Positives = 53/203 (26%), Gaps = 62/203 (30%)
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
I ++ + Y+ F + + I + ++ +Y+ + G +V +
Sbjct: 42 KKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLK---TDDQDIYKVSIYDTKGKNVLEKIF 98
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
+L ++ ++ + P +
Sbjct: 99 ------DLKIQERVSK-------------------------------PKISW-------- 113
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQ 779
N + DP+L + +GK +K R + +
Sbjct: 114 -TCINTTLTCEVMNGTDPELN--LYQDGKHLKLSQR-----------VITHKWTTSLSAK 159
Query: 780 YSCRAYNDYGEAVTSASMKVQGK 802
+ C A N + + + K
Sbjct: 160 FKCTAGNKVSKESSVEPVSCPEK 182
Score = 52.6 bits (126), Expect = 1e-07
Identities = 20/164 (12%), Positives = 43/164 (26%), Gaps = 27/164 (16%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
++ + +K + L I +D IY V ++KG
Sbjct: 46 QFRKEKETFKEKDTYKLFKNG---TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFD--- 99
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT 359
+ + + + + + +GK ++ S R+ T
Sbjct: 100 ---LKIQERVSKPKISW-----TCINTTLTCEV--MNGTDPELNLYQDGKHLKLSQRVIT 149
Query: 360 VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
+ + C A NK + + C +K
Sbjct: 150 HKW-----------TTSLSAKFKCTAGNKVSKESSVEPVSCPEK 182
Score = 51.8 bits (124), Expect = 2e-07
Identities = 34/214 (15%), Positives = 52/214 (24%), Gaps = 80/214 (37%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGL---------VTLSINSLRADDSAIYTCK 53
+D I+W K + + F TL I L+ DD IY
Sbjct: 25 QMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVS 84
Query: 54 ATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFIS 113
+ G+ V L + E + KPK IS
Sbjct: 85 IYDTKGKNVLEKIFD----------------LKIQERVSKPK----------------IS 112
Query: 114 HLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNR 173
N C V N + ++ + +GK + R
Sbjct: 113 W-------TCINTTLTCEVM-------------------NGTDPELNLYQDGKHLKLSQR 146
Query: 174 VKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK 207
V + S ++ C NK
Sbjct: 147 VITHK-----------WTTSLSAKFKCT--AGNK 167
Score = 48.3 bits (115), Expect = 4e-06
Identities = 11/71 (15%), Positives = 25/71 (35%), Gaps = 11/71 (15%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEA 61
E + ++ +++G L L R + + SA + C A N + +
Sbjct: 123 EVMNGTDPELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKVSKE 171
Query: 62 VSTCTLKIEDR 72
S + ++
Sbjct: 172 SSVEPVSCPEK 182
Score = 48.0 bits (114), Expect = 5e-06
Identities = 15/115 (13%), Positives = 27/115 (23%), Gaps = 27/115 (23%)
Query: 1769 TKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEA 1828
K + K + YK + TL I +D Y+ + G+ E
Sbjct: 40 DKKKIAQFRKEKETFKEKDTYKLFKN---GTLKIKHLKTDDQDIYKVSIYDTKGKNVLEK 96
Query: 1829 ELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVK-EGSAVTLKCRITGKP 1882
+ + E + + TL C +
Sbjct: 97 IFDL-----------------------KIQERVSKPKISWTCINTTLTCEVMNGT 128
Score = 46.8 bits (111), Expect = 1e-05
Identities = 19/193 (9%), Positives = 46/193 (23%), Gaps = 66/193 (34%)
Query: 145 LLCTLTPVNDPELKVEWFHNG------------KPIFHKNRVKMVSDFGFVVMDIAYVQS 192
L ++D ++W + K+ K+ + + I ++++
Sbjct: 19 LDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNG---TLKIKHLKT 75
Query: 193 HDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE------------ 240
D Y + + G L+ LK ++
Sbjct: 76 DDQDIYKVS--IYDTK-------------GKNVLEKIFDLKIQERVSKPKISWTCINTTL 120
Query: 241 -------------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKG 287
+ + K L + + S + A N
Sbjct: 121 TCEVMNGTDPELNLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKVS 169
Query: 288 SATTSGTLKCLER 300
++ + C E+
Sbjct: 170 KESSVEPVSCPEK 182
Score = 46.4 bits (110), Expect = 2e-05
Identities = 22/181 (12%), Positives = 48/181 (26%), Gaps = 65/181 (35%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
+L I ++ +DQ Y Y+ G+ + +++Q +V K
Sbjct: 67 TLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIF------DLKIQERVSK------------ 108
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
P+ +T C++ + ++
Sbjct: 109 -------------------------PKIS---------WTCINTTLTCEVM--NGTDPEL 132
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTG 1519
+ +GK L R + S ++ C A N + + +
Sbjct: 133 NLYQDGKHLKLSQR-----------VITHKWTTSLSAKFKCTAGNKVSKESSVEPVSCPE 181
Query: 1520 K 1520
K
Sbjct: 182 K 182
Score = 42.9 bits (101), Expect = 2e-04
Identities = 15/99 (15%), Positives = 27/99 (27%), Gaps = 20/99 (20%)
Query: 1634 EKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 1693
E+ +KP + E P + +++ + S H ++T
Sbjct: 104 ERVSKPKISW---------TCINTTLTCEVMNGTDPELNLYQDGKHLKLSQRVITHKWTT 154
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
S F A N+ K + EK
Sbjct: 155 -----------SLSAKFKCTAGNKVSKESSVEPVSCPEK 182
Score = 40.6 bits (95), Expect = 0.001
Identities = 12/87 (13%), Positives = 23/87 (26%), Gaps = 15/87 (17%)
Query: 1070 GKVHFDCRLEPKSDPTMRIDWFFNGR------------PFATGSRVKTVYDFGFISLDMD 1117
++ D SD I W F K ++ G +L +
Sbjct: 15 QDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK-LFKNG--TLKIK 71
Query: 1118 YVYARDSGEYICRATNKWGTAMTKAKV 1144
++ D Y + G + +
Sbjct: 72 HLKTDDQDIYKVSIYDTKGKNVLEKIF 98
Score = 31.4 bits (71), Expect = 2.0
Identities = 12/104 (11%), Positives = 28/104 (26%), Gaps = 20/104 (19%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNG------------KPLPHKNRFNPIYDFGYVAMNFG 1488
Q + + D ++W + K+ + ++ G +
Sbjct: 15 QDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYK-LFKNG--TLKIK 71
Query: 1489 WVYPEDSGEYLCRATNLYGMDETRA-----ILKTTGKPGIIYES 1527
+ +D Y + G + I + KP I +
Sbjct: 72 HLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISWTC 115
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit;
immunoglobulin fold, glycoprotein, IGE-binding Pro
immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP:
b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A*
1j88_A* 1j89_A* 1j87_A*
Length = 176
Score = 69.5 bits (170), Expect = 2e-13
Identities = 26/164 (15%), Positives = 49/164 (29%), Gaps = 23/164 (14%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G++ C + +WFHNG N ++I + DSGEY
Sbjct: 19 GENVTLTCNGNNFFEVS-STKWFHNGSLSEETNSS----------LNIVNAKFEDSGEYK 67
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 543
C+ P + + L + ++ V E + C ++ ++ ++ +
Sbjct: 68 CQHQQVNESEPVYLEVFSDWLLLQASAEV---VMEGQPLFLRCHG-WRNWDVYKVIYYKD 123
Query: 544 GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 587
G + + DSG Y C
Sbjct: 124 GEALKYWYENHN--------ISITNATVEDSGTYYCTGKVWQLD 159
Score = 67.6 bits (165), Expect = 7e-13
Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 32/153 (20%)
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+ + ++ +NG E ++ L I+ K ED+G Y C+ + +
Sbjct: 33 EVSSTKWFHNGSLSEETNS----------SLNIVNAKFEDSGEYKCQHQQVNESEPVYLE 82
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI--FHK 455
+ D Q + +G C N KV ++ +G+ + +++
Sbjct: 83 VF-SDWLLLQASAEV--------VMEGQPLFLRC-HGWRNWDVYKVIYYKDGEALKYWYE 132
Query: 456 NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
N + I DSG Y C
Sbjct: 133 NH----------NISITNATVEDSGTYYCTGKV 155
Score = 60.7 bits (147), Expect = 2e-10
Identities = 29/198 (14%), Positives = 52/198 (26%), Gaps = 66/198 (33%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+WF+NG + L+I+ E+SG Y+C+ S+
Sbjct: 37 TKWFHNGSLSEETNS----------SLNIVNAKFEDSGEYKCQHQQVNESE--------- 77
Query: 663 SKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREG 722
+L + QA V EG
Sbjct: 78 ---------------------------PVYLEVFSDWLL--LQASAEVV--------MEG 100
Query: 723 ENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSC 782
+ + KV ++ +G+ +K + I+ ED G Y C
Sbjct: 101 QPLFLRCH-GWRNWDVYKVIYYKDGEALKYWYENHN--------ISITNATVEDSGTYYC 151
Query: 783 RAYNDYGEAVTSASMKVQ 800
+ S + +
Sbjct: 152 TGKVWQLD-YESEPLNIT 168
Score = 60.3 bits (146), Expect = 3e-10
Identities = 27/186 (14%), Positives = 49/186 (26%), Gaps = 53/186 (28%)
Query: 493 IPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSR 552
+P P + P ++ + + V C + + WF NG +
Sbjct: 1 VPQKPKVSLN----PPWNR----IFKGENVTLTCNGNNFFEVS-STKWFHNGSLSEETNS 51
Query: 553 VKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTV----------- 601
SL++ DSGEY C+ + +V L +
Sbjct: 52 ----------SLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQ 101
Query: 602 ---------------IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRA 646
V ++ +G+ L + + E+SG Y C
Sbjct: 102 PLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNISITNAT--------VEDSGTYYCTG 153
Query: 647 TNKYGS 652
Sbjct: 154 KVWQLD 159
Score = 59.1 bits (143), Expect = 7e-10
Identities = 37/203 (18%), Positives = 57/203 (28%), Gaps = 39/203 (19%)
Query: 1636 PAKPPVFTKKIQP--CRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFS 1692
P KP V + P R F+ + + + KWF
Sbjct: 2 PQKPKV---SLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEE---------- 48
Query: 1693 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA 1752
T S L + EDSG + + S + +E V L S+
Sbjct: 49 TNSSLNIVNAKFEDSGEYKCQHQQVNE----SEPVYLE---------VFSDWLLLQASAE 95
Query: 1753 VINVGQLARFDAKISATKPLDVY-WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSG 1811
V+ GQ + + K+G+ + + I A VEDSG
Sbjct: 96 VVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHNI--------SITNATVEDSG 147
Query: 1812 AYECVAMNNAGEAR-CEAELVVQ 1833
Y C + + V
Sbjct: 148 TYYCTGKVWQLDYESEPLNITVI 170
Score = 54.9 bits (132), Expect = 2e-08
Identities = 16/94 (17%), Positives = 27/94 (28%), Gaps = 10/94 (10%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVIL 976
L + + E C N V ++ +G+AL +
Sbjct: 86 DWLLLQASAEVVMEGQPLFLRCH-GWRNWDVYKVIYYKDGEALKYWYENHN--------I 136
Query: 977 EINDVYLRDSGLYTCKATNKHGEAT-TSCKLTVK 1009
I + + DSG Y C + +TV
Sbjct: 137 SITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170
Score = 54.9 bits (132), Expect = 2e-08
Identities = 28/164 (17%), Positives = 45/164 (27%), Gaps = 35/164 (21%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
T+WF N +L+IV A EDSG Y + S
Sbjct: 37 TKWFHNGSLSEETNS----------SLNIVNAKFEDSGEYKCQHQQVNESEPVY------ 80
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+ LQ + EG+ V + +G+ ++ +
Sbjct: 81 ----LEVFSDWLLLQASA-EVVMEGQPLFLR-CHGWRNWDVYKVIYYKDGEALKYWYENH 134
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ-----AEISVN 397
+ I +ED+G Y C I+V
Sbjct: 135 N--------ISITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 170
Score = 53.0 bits (127), Expect = 9e-08
Identities = 28/179 (15%), Positives = 50/179 (27%), Gaps = 41/179 (22%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
Q P ++ + +GEN + +WF NG + +
Sbjct: 3 QKPKVSLNPPWNR-IFKGENVTLTCNGNNFFEVS-STKWFHNGSLSEETNS--------- 51
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEA-----VTSASMKVQGKRSIILESQ--------L 811
L I ED G+Y C+ V S + +Q +++E Q
Sbjct: 52 -SLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGW 110
Query: 812 PKGMEVFISFH---------------EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+ ++ I+ ED G Y C + S + +
Sbjct: 111 RNWDVYKVIYYKDGEALKYWYENHNISITNATVEDSGTYYCTGKVWQLD-YESEPLNIT 168
Score = 53.0 bits (127), Expect = 1e-07
Identities = 27/223 (12%), Positives = 51/223 (22%), Gaps = 66/223 (29%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
+ P+ P + + C + S + +WFHNG +
Sbjct: 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVS-STKWFHNGSLSEETNSS--------- 52
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKL 1034
L I + DSG Y C+ + ++V + A
Sbjct: 53 -LNIVNAKFEDSGEYKCQHQQVNESEPVY----------LEVFSDWLLLQA--------- 92
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
V E + C ++ ++ ++ +G
Sbjct: 93 ----------------SAEVVM-----------EGQPLFLRCHG-WRNWDVYKVIYYKDG 124
Query: 1095 RPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 1137
+ + DSG Y C
Sbjct: 125 EALKYWYENHN--------ISITNATVEDSGTYYCTGKVWQLD 159
Score = 52.6 bits (126), Expect = 1e-07
Identities = 25/197 (12%), Positives = 47/197 (23%), Gaps = 79/197 (40%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+WF NG + +L+I + + +DS Y C+
Sbjct: 33 EVSSTKWFHNGSLSEETNS----------SLNIVNAKFEDSGEYKCQHQQ---------- 72
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
+ L S + + E + +
Sbjct: 73 -----------------------------VNESEPVYLEVFSDWLLLQASAEVVMEGQPL 103
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVV 184
C N KV ++ +G+ + +++N
Sbjct: 104 FLRCHGWR------------------NWDVYKVIYYKDGEALKYWYENH----------N 135
Query: 185 MDIAYVQSHDSGEYVCQ 201
+ I DSG Y C
Sbjct: 136 ISITNATVEDSGTYYCT 152
Score = 49.9 bits (119), Expect = 9e-07
Identities = 34/199 (17%), Positives = 51/199 (25%), Gaps = 48/199 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + + ENV C +WFHNG
Sbjct: 5 PKVSLNPPWNRIFKGENVTLTCNGNNFF------------------EVSSTKWFHNGSLS 46
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQW-----------FVNNKPLPAGAKFKT 217
N ++I + DSGEY CQ V + L A +
Sbjct: 47 EETNSS----------LNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEV 96
Query: 218 THDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
+ + L V ++ + + L + + I A EDSG
Sbjct: 97 VMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYENHN--------ISITNATVEDSGT 148
Query: 278 YTVKATNSKGSATTSGTLK 296
Y + S L
Sbjct: 149 YYCTGKVWQLD-YESEPLN 166
Score = 48.0 bits (114), Expect = 4e-06
Identities = 18/177 (10%), Positives = 42/177 (23%), Gaps = 18/177 (10%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEH 1621
P P ++ +GE C + W NG E + E
Sbjct: 5 PKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLS-EETNSSLNIVNAKF-ED 62
Query: 1622 KGKIQ-----ERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFR 1675
G+ + + + E + + +++
Sbjct: 63 SGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYK 122
Query: 1676 EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEE 1731
+ + + + +EDSG + + + N+ V +
Sbjct: 123 DGEALKYW--------YENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIK 171
Score = 46.4 bits (110), Expect = 2e-05
Identities = 26/182 (14%), Positives = 46/182 (25%), Gaps = 58/182 (31%)
Query: 1424 PPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGY 1482
P + + + + ++ C +WF NG N I +
Sbjct: 2 PQKPKVSLNPPWNRIFKGENVTLTCN-GNNFFEVSSTKWFHNGSLSEETNSSLNIVN--- 57
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
EDSGEY C+ + +
Sbjct: 58 -------AKFEDSGEYKCQHQQVNESE--------------------------------- 77
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGH 1601
P L + Q A+ V EG+P C + +V++ +G
Sbjct: 78 -------PVYLEVFSDW-----LLLQASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGE 125
Query: 1602 TI 1603
+
Sbjct: 126 AL 127
Score = 45.3 bits (107), Expect = 4e-05
Identities = 24/168 (14%), Positives = 38/168 (22%), Gaps = 61/168 (36%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
SL+I ED GEY C+
Sbjct: 52 SLNIVNAKFEDSGEYKCQHQQ--------------------------------------- 72
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
+ + + Q + ++E Q C KV
Sbjct: 73 -----VNESEPVYLEVFSDWLLLQASA--------EVVMEGQPLFLRCH-GWRNWDVYKV 118
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYG 1507
++ +G+ L + N + EDSG Y C
Sbjct: 119 IYYKDGEALKYWYE-NHNI-------SITNATVEDSGTYYCTGKVWQL 158
Score = 44.9 bits (106), Expect = 5e-05
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 8/57 (14%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
K+ ++K+G L +SI + +DS Y C + S
Sbjct: 114 DVYKVIYYKDGEALKYWYENH--------NISITNATVEDSGTYYCTGKVWQLDYES 162
Score = 43.7 bits (103), Expect = 1e-04
Identities = 20/116 (17%), Positives = 29/116 (25%), Gaps = 32/116 (27%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + W NG +L I+ A EDSG Y+C
Sbjct: 30 NFFEVSSTKWFHNGSLSEETNS----------SLNIVNAKFEDSGEYKCQHQQVNES--- 76
Query: 1827 EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
E + QA + V EG + L+C
Sbjct: 77 EPVYLEVFSDWLLLQAS-------------------AEVVMEGQPLFLRCHGWRNW 113
Score = 41.0 bits (96), Expect = 0.001
Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 17/110 (15%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
P P + N + + V C + + WF NG +
Sbjct: 2 PQKPKVSLNPPWN-RIFKGENVTLTCNGNNFFEVS-STKWFHNGSLSEETNS-------- 51
Query: 1111 FISLDMDYVYARDSGEYICRATNKWGTA-----MTKAKVICKAKHDIVTE 1155
SL++ DSGEY C+ + + ++ +A ++V E
Sbjct: 52 --SLNIVNAKFEDSGEYKCQHQQVNESEPVYLEVFSDWLLLQASAEVVME 99
Score = 32.9 bits (75), Expect = 0.51
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGE 1364
++ I ED G Y C +
Sbjct: 135 NISITNATVEDSGTYYCTGKVWQLD 159
Score = 30.2 bits (68), Expect = 4.5
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
P V+ + +G VTL C
Sbjct: 5 PKVSLNPPWNRIFKGENVTLTCNGNNFF 32
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral
protein-immune system compl; HET: NAG SUC; 1.99A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B*
2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C*
3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A
3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Length = 184
Score = 68.9 bits (168), Expect = 4e-13
Identities = 28/197 (14%), Positives = 51/197 (25%), Gaps = 45/197 (22%)
Query: 1655 DQARFEVEFDGDPLPTIKWFRED----------FPITSSPDFQIHTFSTKSI-------L 1697
D W + F S +S+ L
Sbjct: 11 DTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPL 70
Query: 1698 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVG 1757
I++ + +EDS + C EE + G + G
Sbjct: 71 IIKNLKIEDSDTY-----------ICEVEDQKEEVQLLVFGLTANSD-------THLLQG 112
Query: 1758 QLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVA 1817
Q + V K I + TL + + ++DSG + C
Sbjct: 113 QSLTLTLESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTV 162
Query: 1818 MNNAGEARCEAELVVQS 1834
+ N + + ++VV +
Sbjct: 163 LQNQKKVEFKIDIVVLA 179
Score = 68.5 bits (167), Expect = 6e-13
Identities = 21/191 (10%), Positives = 52/191 (27%), Gaps = 39/191 (20%)
Query: 422 KDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD----------- 470
K GD+ CT + ++ W ++ + N+ ++ + D
Sbjct: 8 KKGDTVELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQ 65
Query: 471 ------IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHF 524
I ++ DS Y+C + + + + + + +
Sbjct: 66 GNFPLIIKNLKIEDSDTYICEVED--------QKEEVQLLVFGLTANSDTHLLQGQSLTL 117
Query: 525 DCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNK 584
E + + G + +L + + +DSG + C
Sbjct: 118 TL--ESPPGSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQN 165
Query: 585 WGTAMTKAKVI 595
K ++
Sbjct: 166 QKKVEFKIDIV 176
Score = 63.5 bits (154), Expect = 2e-11
Identities = 13/181 (7%), Positives = 44/181 (24%), Gaps = 35/181 (19%)
Query: 1574 VQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGKIQERVVD-- 1631
++G+ + + W + + +++ + + + D
Sbjct: 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQG 66
Query: 1632 --------------------ASEKPAKPPVFTKKI---QPCRAFEQDQARFEVEFDGDPL 1668
++ + + + + +E
Sbjct: 67 NFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSS 126
Query: 1669 PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 1728
P+++ L + Q+ ++DSG + K + ++V
Sbjct: 127 PSVQCRSPRGKN----------IQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 176
Query: 1729 V 1729
V
Sbjct: 177 V 177
Score = 61.5 bits (149), Expect = 1e-10
Identities = 22/126 (17%), Positives = 36/126 (28%), Gaps = 26/126 (20%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKD 423
G L I KIED+ Y C ++ + ++ V F S L
Sbjct: 66 GNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLV--------------FGLTANSDTHLLQ 111
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G S P V+ + + ++ ++ DSG +
Sbjct: 112 GQSLTLTLESPP--GSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWT 159
Query: 484 CRAWNN 489
C N
Sbjct: 160 CTVLQN 165
Score = 61.1 bits (148), Expect = 2e-10
Identities = 22/229 (9%), Positives = 50/229 (21%), Gaps = 82/229 (35%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTIN-----------------DFGFVIL 976
C + S+ W ++ + G++ + D G L
Sbjct: 13 VELTCT--ASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPL 70
Query: 977 EINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEE 1036
I ++ + DS Y C+ ++ E G+
Sbjct: 71 IIKNLKIEDSDTYICEVEDQKEEVQL-------LVFGLTANSDTH--------------- 108
Query: 1037 ALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 1096
+ + + E + +
Sbjct: 109 -----------------------------LLQGQSLTLTL--ESPPGSSPSVQCRSPRGK 137
Query: 1097 FATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
G + +L + + +DSG + C K ++
Sbjct: 138 NIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 176
Score = 59.6 bits (144), Expect = 6e-10
Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 12/91 (13%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEIN 979
LT +D L + P S +V+ G + L ++
Sbjct: 101 LTANSDTHLLQGQSLTLTLESPP--GSSPSVQCRSPRGKNIQGGKT----------LSVS 148
Query: 980 DVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
+ L+DSG +TC + + V
Sbjct: 149 QLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179
Score = 57.7 bits (139), Expect = 2e-09
Identities = 22/174 (12%), Positives = 48/174 (27%), Gaps = 39/174 (22%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSR-----------------FRTFCDF 762
++G+ + ++ W + + G++ R+ D
Sbjct: 8 KKGDTVELTCT--ASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQ 65
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ------------ 810
G L I + ED Y C + E + +L+ Q
Sbjct: 66 GNFPLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGS 125
Query: 811 -------LPKGMEVFISFH-EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
P+G + +S + +D G ++C + + + V
Sbjct: 126 SPSVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179
Score = 54.6 bits (131), Expect = 3e-08
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 12/97 (12%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF 764
Q VF + ++ L +G++ P V+ G +
Sbjct: 95 QLLVFGLTANSDTHLLQGQSLTLTLESPP--GSSPSVQCRSPRGKNIQGGK--------- 143
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
L +S + +D G ++C + + + V
Sbjct: 144 -TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179
Score = 53.4 bits (128), Expect = 7e-08
Identities = 19/145 (13%), Positives = 38/145 (26%), Gaps = 44/145 (30%)
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKIIPDIR-----------------YKTLEEDNLF 1798
G S K + +W + + I + ++L + F
Sbjct: 9 KGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNF 68
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVA 1858
L+I +EDS Y C + E + + +
Sbjct: 69 PLIIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANS----------------------- 105
Query: 1859 EPLKDQNVKEGSAVTLKCRITGKPR 1883
D ++ +G ++TL
Sbjct: 106 ----DTHLLQGQSLTLTLESPPGSS 126
Score = 48.1 bits (114), Expect = 5e-06
Identities = 23/211 (10%), Positives = 49/211 (23%), Gaps = 90/211 (42%)
Query: 7 PNLKIEWFKNGVPLSLGSRI-----------------RSTFDFGLVTLSINSLRADDSAI 49
+++ W + LG++ RS +D G L I +L+ +DS
Sbjct: 23 KSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82
Query: 50 YTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSP 109
Y C+ + E V + +
Sbjct: 83 YICEVEDQKEE-VQLLVFG------------------------------------LTANS 105
Query: 110 VFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIF 169
D + +++ P V+
Sbjct: 106 -------DTHLLQGQSLTLTLESPP-------------------GSSPSVQCRSPRGKNI 139
Query: 170 HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+ + ++ ++ DSG + C
Sbjct: 140 QGGK----------TLSVSQLELQDSGTWTC 160
Score = 46.5 bits (110), Expect = 2e-05
Identities = 20/176 (11%), Positives = 45/176 (25%), Gaps = 49/176 (27%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSR-----------------VKTVYDFGFISL 564
V C +++ W + + G++ ++++D G L
Sbjct: 13 VELTCTAS--QKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPL 70
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTK-----------------AKVICKVL---TVIVE 604
+ + DS YIC ++ + + + V+
Sbjct: 71 IIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQ 130
Query: 605 WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
K G + L + ++SG + C K +
Sbjct: 131 CRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 176
Score = 45.7 bits (108), Expect = 3e-05
Identities = 22/136 (16%), Positives = 43/136 (31%), Gaps = 30/136 (22%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I EDS Y + + K +F L ++L +G+
Sbjct: 70 LIIKNLKIEDSDTYICEVEDQKEEVQLL----------------VFGLTANSDTHLLQGQ 113
Query: 325 IAHFEASLIPVGDQTMTVEFL-YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTC 383
L + +V+ GK I+ L + +++D+G +TC
Sbjct: 114 SLTLT--LESPPGSSPSVQCRSPRGKNIQGGK-----------TLSVSQLELQDSGTWTC 160
Query: 384 RATNKWGQAEISVNLE 399
+ E +++
Sbjct: 161 TVLQNQKKVEFKIDIV 176
Score = 45.0 bits (106), Expect = 5e-05
Identities = 24/208 (11%), Positives = 54/208 (25%), Gaps = 65/208 (31%)
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMV 177
V K+ + V C ++ W ++ + N+ +
Sbjct: 5 VLGKKGDTVELTCTAS-------------------QKKSIQFHWKNSNQIKILGNQGSFL 45
Query: 178 SDFGFVVMD-----------------IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHD 220
+ + D I ++ DS Y+C+ V ++ + +
Sbjct: 46 TKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE--VEDQK----EEVQLLVF 99
Query: 221 FGYVALDIELML-KTLV----------PFTEWF-VNNKPLPAGAKFKTTHDFGYVALDIV 268
D L+ ++L P + K + G L +
Sbjct: 100 GLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGK-----------TLSVS 148
Query: 269 GAYAEDSGIYTVKATNSKGSATTSGTLK 296
+DSG +T ++ +
Sbjct: 149 QLELQDSGTWTCTVLQNQKKVEFKIDIV 176
Score = 44.2 bits (104), Expect = 9e-05
Identities = 9/64 (14%), Positives = 19/64 (29%), Gaps = 10/64 (15%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+ ++ G + TLS++ L DS +TC +
Sbjct: 124 GSSPSVQCRSPRGKNIQGGK----------TLSVSQLELQDSGTWTCTVLQNQKKVEFKI 173
Query: 66 TLKI 69
+ +
Sbjct: 174 DIVV 177
Score = 41.5 bits (97), Expect = 7e-04
Identities = 12/104 (11%), Positives = 28/104 (26%), Gaps = 12/104 (11%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
+ E+ Q F + L++ QS + + V+ +
Sbjct: 90 QKEEVQLLVFGLTANSDTHLLQGQSLTLTLESP--PGSSPSVQCRSPRGKNIQGGK---- 143
Query: 1478 YDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
++ + +DSG + C E + +
Sbjct: 144 ------TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQ 181
Score = 38.0 bits (88), Expect = 0.013
Identities = 13/180 (7%), Positives = 32/180 (17%), Gaps = 69/180 (38%)
Query: 1444 KFECQLAPVGDPNMKVEWFLNGKPL----------PHKNRFNPIYDFGYVAMNFGW---- 1489
+ C +++ W + + ++ N D + G
Sbjct: 14 ELTCT--ASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLI 71
Query: 1490 ---VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASW 1546
+ EDS Y+C + +
Sbjct: 72 IKNLKIEDSDTYICEVEDQKEEVQLL---------------------------------- 97
Query: 1547 QHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
++ + +G+ P V +
Sbjct: 98 ----------------VFGLTANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQG 141
Score = 36.9 bits (85), Expect = 0.030
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
+L + + +D G + C + + K I
Sbjct: 144 TLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIV 176
Score = 36.1 bits (83), Expect = 0.057
Identities = 13/96 (13%), Positives = 26/96 (27%), Gaps = 8/96 (8%)
Query: 1272 ESVTVQEAEPVRFETRVEPRVDPR---LRVECSLSTAFFFPFINISTAFLIFNFCLHAVI 1328
+ V ++ + V + + F+ + L
Sbjct: 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLN-----DRAD 57
Query: 1329 FSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGE 1364
++D G L I + ED Y+C + E
Sbjct: 58 SRRSLWDQGNFPLIIKNLKIEDSDTYICEVEDQKEE 93
Score = 29.6 bits (66), Expect = 7.8
Identities = 8/43 (18%), Positives = 13/43 (30%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQ 865
I + ED Y C + E + +L+ Q
Sbjct: 71 IIKNLKIEDSDTYICEVEDQKEEVQLLVFGLTANSDTHLLQGQ 113
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3;
immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A
{Branchiostoma floridae}
Length = 250
Score = 70.3 bits (171), Expect = 4e-13
Identities = 28/223 (12%), Positives = 45/223 (20%), Gaps = 61/223 (27%)
Query: 1665 GDPLPTIKWFREDFPITSSPDFQIH-----------------------------TFSTKS 1695
P I W + P S+ F+ +
Sbjct: 31 DTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLAAP 90
Query: 1696 ILIMRQVFMEDSG-----VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
L + V +D G V G S L V ++T
Sbjct: 91 TLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG------HTPSNNVHVSTAE 144
Query: 1751 SAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL------------- 1797
++ G + +V W N
Sbjct: 145 VVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIA 204
Query: 1798 --------FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
L+I A + D+G C GE + +
Sbjct: 205 GRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTI 247
Score = 69.2 bits (168), Expect = 9e-13
Identities = 40/323 (12%), Positives = 73/323 (22%), Gaps = 105/323 (32%)
Query: 710 TVPLSNIDDLREGENAHFEARLT-PTDDPKLKVEWFWNGKPMKTGSRFRTF--CDFGFVI 766
+ ++ + G D + W P ++ F+ +
Sbjct: 6 RTTHTEVE-VHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLG 64
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISP 826
S Y E G + RA S+ ++ ++
Sbjct: 65 FVESDSYKESFGDFLGRA-----------SVANLAAPTLR-----------------LTH 96
Query: 827 VYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHE 886
V+P+D G+Y C+ + G K L+ GH
Sbjct: 97 VHPQDGGRYWCQVAQWSI-----------------------RTEFGLDAKSVVLKVTGHT 133
Query: 887 REDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDP 946
++T + + E C T+
Sbjct: 134 ---------------------------PSNNVHVSTAEVVQVDEGNDITMTC--PCTDCA 164
Query: 947 SMTVEWFHNGKALSAGSR-----IKTINDFGFVI----------------LEINDVYLRD 985
+ V W+ + N FG L I + D
Sbjct: 165 NANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITD 224
Query: 986 SGLYTCKATNKHGEATTSCKLTV 1008
+G C+ GE T+
Sbjct: 225 AGRVWCELATGQGELDADRSSTI 247
Score = 65.3 bits (158), Expect = 2e-11
Identities = 30/281 (10%), Positives = 52/281 (18%), Gaps = 97/281 (34%)
Query: 921 TTPTDLTLAESTLAHFECRLTPTN-DPSMTVEWFHNGKALSAGSRIK------------- 966
TT T++ + C N + W + K
Sbjct: 7 TTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFV 66
Query: 967 ----------------TINDFGFVILEINDVYLRDSGLYTCKATNKH-----GEATTSCK 1005
++ + L + V+ +D G Y C+ G S
Sbjct: 67 ESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVV 126
Query: 1006 LTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLD 1065
L V G P+ V S + +
Sbjct: 127 LKVTGH--------------------------------------TPSNNVHVSTAE-VVQ 147
Query: 1066 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR--- 1122
V E + C + W+ F + + +
Sbjct: 148 VDEGNDITMTC--PCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAG 205
Query: 1123 ------------------DSGEYICRATNKWGTAMTKAKVI 1145
D+G C G
Sbjct: 206 RASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSST 246
Score = 63.4 bits (153), Expect = 8e-11
Identities = 22/249 (8%), Positives = 45/249 (18%), Gaps = 85/249 (34%)
Query: 424 GDSAHFECTLTPVN-DPELKVEWFHNGKPIFH---------------------------- 454
G + C+ N + W P
Sbjct: 17 GGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFG 76
Query: 455 --KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN-----------------FIFIPP 495
R + + + + +V D G Y C+ P
Sbjct: 77 DFLGRASVANLAAPTLR-LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPS 135
Query: 496 FPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 555
+ + + + + V E + C + W+ F
Sbjct: 136 NNVHV--------STAEVVQVDEGNDITMTC--PCTDCANANVTWYTGPTFFENYETGTY 185
Query: 556 VYDFGFISLDMDYVYAR---------------------DSGEYICRATNKWGTAMTKAKV 594
+ + + D+G C G
Sbjct: 186 QPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRS- 244
Query: 595 ICKVLTVIV 603
T++
Sbjct: 245 ----STILK 249
Score = 62.6 bits (151), Expect = 2e-10
Identities = 28/210 (13%), Positives = 42/210 (20%), Gaps = 68/210 (32%)
Query: 1428 VTQIKTQDQLVEM---QSTKFECQL-APVGDPNMKVEWFLNGKPLPHKNRFNPIY----- 1478
+ ++T VE+ + + C + W P F Y
Sbjct: 2 IMTVRTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGE 61
Query: 1479 ------------------------DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAI 1514
+ + V+P+D G Y C+ E
Sbjct: 62 GLGFVESDSYKESFGDFLGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLD 121
Query: 1515 LKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKV 1574
K+ L V VS E +V
Sbjct: 122 AKSV---------------------------------VLKVTGHTPSNNVHVSTAEVVQV 148
Query: 1575 QEGEPARF-CTRVTGYPRPRVMWLINGHTI 1603
EG C T V W
Sbjct: 149 DEGNDITMTCP-CTDCANANVTWYTGPTFF 177
Score = 54.1 bits (129), Expect = 1e-07
Identities = 39/321 (12%), Positives = 65/321 (20%), Gaps = 101/321 (31%)
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLE-PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 561
+R ++V G V C + I W P + K Y++
Sbjct: 4 TVRTTHTE---VEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQG 60
Query: 562 --ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPHGHRYR 619
+ Y G+++ RA+ A T
Sbjct: 61 EGLGFVESDSYKESFGDFLGRASVANLAAPT----------------------------- 91
Query: 620 TFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEG 679
+ + + ++ G Y C+ K L + P
Sbjct: 92 ------LRLTHVH---PQDGGRYWCQVAQWSIRTEFGLDAK---SVVLKVTGHTPS---- 135
Query: 680 GLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKL 739
V + + EG + TD
Sbjct: 136 --------------------------NNVHVSTAEVVQ-VDEGNDITMTC--PCTDCANA 166
Query: 740 KVEWFWNGKPMKTGSRFR-----TFCDFGFVI----------------LEISPVYPEDCG 778
V W+ + FG L I D G
Sbjct: 167 NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAG 226
Query: 779 QYSCRAYNDYGEAVTSASMKV 799
+ C GE S +
Sbjct: 227 RVWCELATGQGELDADRSSTI 247
Score = 49.9 bits (118), Expect = 3e-06
Identities = 15/98 (15%), Positives = 24/98 (24%), Gaps = 20/98 (20%)
Query: 1791 TLEEDNLFTLLIIEAVVEDSGAYECVAMNNA-----GEARCEAELVVQSKKAPGKQAPAP 1845
++ TL + +D G Y C + G L V
Sbjct: 83 SVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPS------- 135
Query: 1846 GAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
+ V EG+ +T+ C T
Sbjct: 136 --------NNVHVSTAEVVQVDEGNDITMTCPCTDCAN 165
Score = 49.1 bits (116), Expect = 4e-06
Identities = 29/247 (11%), Positives = 50/247 (20%), Gaps = 60/247 (24%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTF-----------------------------DFG 33
I W K P + + +
Sbjct: 29 ANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVANLA 88
Query: 34 LVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEK 93
TL + + D Y C+ ++ T L P
Sbjct: 89 APTLRLTHVHPQDGGRYWCQVAQ---WSIRTEFGLDAKSVVLKVTGHTPSN--------- 136
Query: 94 PKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVE--PSKDATMKIGKLLCTLTP 151
V +S V+ E ++ C + + T G
Sbjct: 137 ---------------NVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYE 181
Query: 152 VNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPA 211
+ G F S G + I + D+G C+ +
Sbjct: 182 TGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCE--LATGQGEL 239
Query: 212 GAKFKTT 218
A +T
Sbjct: 240 DADRSST 246
Score = 48.0 bits (113), Expect = 1e-05
Identities = 24/205 (11%), Positives = 43/205 (20%), Gaps = 65/205 (31%)
Query: 1333 IFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKT 1392
+ +L +L + +V+P+D G Y C+ +T
Sbjct: 84 VANLAAPTLRLTHVHPQDGGRYWCQVAQWSI---------------------------RT 116
Query: 1393 EALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEM-QSTKFECQLAP 1451
E + ++ + K T P V + V+ C
Sbjct: 117 EFGLDAKSVVLKVTGHT--------------PSNNVHVSTAEVVQVDEGNDITMTCP--C 160
Query: 1452 VGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVY-------------------- 1491
N V W+ + W
Sbjct: 161 TDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAA 220
Query: 1492 -PEDSGEYLCRATNLYGMDETRAIL 1515
D+G C G +
Sbjct: 221 KITDAGRVWCELATGQGELDADRSS 245
Score = 46.4 bits (109), Expect = 4e-05
Identities = 22/167 (13%), Positives = 39/167 (23%), Gaps = 28/167 (16%)
Query: 256 TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQ 315
+ + L + + +D G Y + T G L V + P ++
Sbjct: 83 SVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIR-TEFGLDAKSVVLKVTGHTPSNNVHVS 141
Query: 316 HLSNLS--EGEIAHFE----------------ASLIPVGDQTMTVEFLYNGK------PI 351
+ EG + + +
Sbjct: 142 TAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSS 201
Query: 352 EASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
E + R G L I KI D G C G+ + +
Sbjct: 202 EIAGR---ASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSS 245
Score = 46.1 bits (108), Expect = 5e-05
Identities = 19/111 (17%), Positives = 26/111 (23%), Gaps = 6/111 (5%)
Query: 1264 PPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFC 1323
++ E V V E + V FF + + L
Sbjct: 136 NNVHVSTAEVVQVDEGNDITMTCPCTD--CANANVTWYTGPTFFENYETGTYQPLANKNQ 193
Query: 1324 LHAVIFSHPIFD----LGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
FS I G +L I D G C GE +
Sbjct: 194 FGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRS 244
Score = 41.1 bits (95), Expect = 0.002
Identities = 10/89 (11%), Positives = 18/89 (20%), Gaps = 21/89 (23%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDF---------------------GLVTLSIN 40
N + W+ G L I
Sbjct: 159 PCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIR 218
Query: 41 SLRADDSAIYTCKATNLLGEAVSTCTLKI 69
+ + D+ C+ GE + + I
Sbjct: 219 AAKITDAGRVWCELATGQGELDADRSSTI 247
Score = 30.3 bits (67), Expect = 6.0
Identities = 7/25 (28%), Positives = 8/25 (32%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRIT 1879
TV + V G V L C
Sbjct: 3 MTVRTTHTEVEVHAGGTVELPCSYQ 27
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF
receptor, cancer, immune system-transfer complex; HET:
NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Length = 122
Score = 66.3 bits (161), Expect = 6e-13
Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 8/110 (7%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIK--------TINDF 971
L+ + L+ C + + W + + +
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 71
Query: 972 GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
L I+ V D GLYTC A++ S + V + + +
Sbjct: 72 FLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGME 121
Score = 56.7 bits (136), Expect = 1e-09
Identities = 19/113 (16%), Positives = 31/113 (27%), Gaps = 9/113 (7%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFR--------T 758
V P I+ L GE + + W + + +
Sbjct: 9 DVVLSPSHGIE-LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGS 67
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQL 811
L I V D G Y+C A + S ++V K + S +
Sbjct: 68 EMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGM 120
Score = 51.7 bits (123), Expect = 7e-08
Identities = 16/107 (14%), Positives = 34/107 (31%), Gaps = 10/107 (9%)
Query: 497 PIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK-- 554
P + + + L +++ K+ +C + + + +W + V
Sbjct: 3 PGYRIYDVVLSPSH--GIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRD 60
Query: 555 ------TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+ +L +D V D G Y C A++ T V
Sbjct: 61 LKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 107
Score = 49.4 bits (117), Expect = 5e-07
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 12/108 (11%)
Query: 1436 QLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGW------ 1489
+L + C + + W HK N + +
Sbjct: 19 ELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTI 78
Query: 1490 --VYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKS 1535
V D G Y C A++ + ++ KP + GM+S
Sbjct: 79 DGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFV----AFGSGMES 122
Score = 49.0 bits (116), Expect = 7e-07
Identities = 11/80 (13%), Positives = 27/80 (33%), Gaps = 8/80 (10%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDF--------GLVTLSINSLRADDSAIYTC 52
+ + W + L TL+I+ + D +YTC
Sbjct: 32 ARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTC 91
Query: 53 KATNLLGEAVSTCTLKIEDR 72
A++ L ++ +++ ++
Sbjct: 92 AASSGLMTKKNSTFVRVHEK 111
Score = 47.0 bits (111), Expect = 4e-06
Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 10/106 (9%)
Query: 1050 KPNPPVFTSQLQ--DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVK--- 1104
P ++ L +++ K+ +C + + + +W + V
Sbjct: 2 DPGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDL 61
Query: 1105 -----TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ +L +D V D G Y C A++ T V
Sbjct: 62 KTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVR 107
Score = 46.7 bits (110), Expect = 5e-06
Identities = 15/76 (19%), Positives = 21/76 (27%), Gaps = 8/76 (10%)
Query: 421 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF--------GFVVMDIA 472
L G+ CT + + W + HK V + I
Sbjct: 20 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTID 79
Query: 473 YVQSHDSGEYVCRAWN 488
V D G Y C A +
Sbjct: 80 GVTRSDQGLYTCAASS 95
Score = 44.7 bits (105), Expect = 2e-05
Identities = 17/87 (19%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Query: 1648 PCRAFEQDQARFEV--EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFME 1705
C A + + E+ K D S + + S L + V
Sbjct: 29 NCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFL----STLTIDGVTRS 84
Query: 1706 DSGVFAVIAENRGGKAKCSANLVVEEK 1732
D G++ A + K S + V EK
Sbjct: 85 DQGLYTCAASSGLMTKKNSTFVRVHEK 111
Score = 44.7 bits (105), Expect = 2e-05
Identities = 17/108 (15%), Positives = 30/108 (27%), Gaps = 10/108 (9%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDV--YWLKNGKKI-------IPDIR 1788
G + L+ ++VG+ + + + W K
Sbjct: 4 GYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKT 63
Query: 1789 YKTLEEDNLFTLLIIEAV-VEDSGAYECVAMNNAGEARCEAELVVQSK 1835
E + L I+ V D G Y C A + + + V K
Sbjct: 64 QSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK 111
Score = 42.8 bits (100), Expect = 1e-04
Identities = 15/118 (12%), Positives = 32/118 (27%), Gaps = 9/118 (7%)
Query: 1268 ITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAV 1327
++ + + E + ++ + +P L+
Sbjct: 12 LSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE------YPSSKHQHKKLVNRD---LK 62
Query: 1328 IFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQV 1385
S +L ID V DQG Y C A + + + P + + +
Sbjct: 63 TQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGM 120
Score = 42.0 bits (98), Expect = 2e-04
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQL 866
I V D G Y+C A + S ++V K + S +
Sbjct: 78 IDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGM 120
Score = 40.5 bits (94), Expect = 6e-04
Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 11/88 (12%)
Query: 125 NVHFDCRVEPSKDATMKIG---KLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF- 180
+D + PS + +G L CT + + W + HK V
Sbjct: 5 YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQ 64
Query: 181 -------GFVVMDIAYVQSHDSGEYVCQ 201
+ I V D G Y C
Sbjct: 65 SGSEMKKFLSTLTIDGVTRSDQGLYTCA 92
Score = 40.1 bits (93), Expect = 9e-04
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 8/92 (8%)
Query: 320 LSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR--------TVHAFGMVVLEIL 371
LS GE + + + + Y + + + + L I
Sbjct: 20 LSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTID 79
Query: 372 GTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
G D G+YTC A++ + S + +K
Sbjct: 80 GVTRSDQGLYTCAASSGLMTKKNSTFVRVHEK 111
Score = 39.3 bits (91), Expect = 0.002
Identities = 12/83 (14%), Positives = 23/83 (27%), Gaps = 13/83 (15%)
Query: 591 KAKVICKVL-----TVIVEWFYNGKKLPHGHRYR--------TFHDFGIVILDILYCYEE 637
K + C + W Y K H + + L I
Sbjct: 25 KLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRS 84
Query: 638 NSGVYECRATNKYGSDVTKASLK 660
+ G+Y C A++ + ++
Sbjct: 85 DQGLYTCAASSGLMTKKNSTFVR 107
Score = 37.8 bits (87), Expect = 0.006
Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Query: 241 WFVNNKPLPAGAKFK--------TTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
W + + L I G D G+YT A++ + S
Sbjct: 44 WEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS 103
Query: 293 GTLKCLERLFVNHNYPLFS 311
++ E+ FV + S
Sbjct: 104 TFVRVHEKPFVAFGSGMES 122
Score = 32.4 bits (73), Expect = 0.48
Identities = 9/63 (14%), Positives = 17/63 (26%), Gaps = 4/63 (6%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRV--MWLINGHTIVNEIVRKITATETTEM 1619
V +S ++ GE CT + W ++ + +
Sbjct: 9 DVVLSPSHGIELSVGEKLVLNCT-ARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGS 67
Query: 1620 EHK 1622
E K
Sbjct: 68 EMK 70
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta
sandwich, immunoglobulin-like, immune system receptor;
1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A
1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Length = 175
Score = 68.0 bits (166), Expect = 6e-13
Identities = 30/164 (18%), Positives = 48/164 (29%), Gaps = 23/164 (14%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
DS +C + + +WFHN I + I +DSGEY
Sbjct: 22 KDSVTLKCQGAY-SPEDNSTQWFHNESLISSQASS----------YFIDAATVNDSGEYR 70
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 543
C+ N P + + L + E +H C K+ ++ + N
Sbjct: 71 CQT-NLSTLSDPVQLEVHIGWLLLQAPRWV--FKEEDPIHLRCHS-WKNTALHKVTYLQN 126
Query: 544 GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 587
G+ + +DSG Y CR
Sbjct: 127 GKDRKYFHHNSD--------FHIPKATLKDSGSYFCRGLVGSKN 162
Score = 63.0 bits (153), Expect = 4e-11
Identities = 24/152 (15%), Positives = 41/152 (26%), Gaps = 28/152 (18%)
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+ + ++ +N I + I + D+G Y C+ + +
Sbjct: 36 EDNSTQWFHNESLISSQASS----------YFIDAATVNDSGEYRCQTNLSTLSDPVQLE 85
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNR 457
+ K+ D H C + N KV + NGK + +
Sbjct: 86 VHI-------GWLLLQA--PRWVFKEEDPIHLRCH-SWKNTALHKVTYLQNGKDRKYFHH 135
Query: 458 VKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
I DSG Y CR
Sbjct: 136 NSDFH--------IPKATLKDSGSYFCRGLVG 159
Score = 58.0 bits (140), Expect = 2e-09
Identities = 28/199 (14%), Positives = 46/199 (23%), Gaps = 66/199 (33%)
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+WF+N + I +SG Y C+ SD
Sbjct: 39 STQWFHNESLISSQAS----------SYFIDAATVNDSGEYRCQTNLSTLSD-------- 80
Query: 662 VSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLRE 721
+E + + +E
Sbjct: 81 ------------------------------------PVQLEVHIGWLLLQAPRWV--FKE 102
Query: 722 GENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYS 781
+ H + + KV + NGK K F I +D G Y
Sbjct: 103 EDPIHLRCH-SWKNTALHKVTYLQNGKDRKYFHHNSDF--------HIPKATLKDSGSYF 153
Query: 782 CRAYNDYGEAVTSASMKVQ 800
CR V+S ++ +
Sbjct: 154 CRGLVGSKN-VSSETVNIT 171
Score = 54.9 bits (132), Expect = 2e-08
Identities = 31/206 (15%), Positives = 57/206 (27%), Gaps = 39/206 (18%)
Query: 1633 SEKPAKPPVFTKKIQP--CRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIH 1689
+E K V ++P E+D + + P + +WF + I+S
Sbjct: 2 TEDLPKAVV---FLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISSQ------ 52
Query: 1690 TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI 1749
S + + DSG + + L V + L
Sbjct: 53 ----ASSYFIDAATVNDSGEY--RCQTNLSTLSDPVQLEVH----------IGWLLLQ-A 95
Query: 1750 SSAVINVGQLARFDAKISATKPLDVY-WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVE 1808
V L +L+NGK + I +A ++
Sbjct: 96 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLK 147
Query: 1809 DSGAYECVAMNNAGEAR-CEAELVVQ 1833
DSG+Y C + + + +
Sbjct: 148 DSGSYFCRGLVGSKNVSSETVNITIT 173
Score = 54.5 bits (131), Expect = 3e-08
Identities = 19/109 (17%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 902 GHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA 961
D ++ ++ L P E H C + N V + NGK
Sbjct: 75 LSTLSDPVQLEVHIGWLLLQAPRW-VFKEEDPIHLRCH-SWKNTALHKVTYLQNGKDRKY 132
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEAT-TSCKLTVK 1009
I L+DSG Y C+ + + +T+
Sbjct: 133 FHHNSD--------FHIPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 173
Score = 53.3 bits (128), Expect = 7e-08
Identities = 32/185 (17%), Positives = 49/185 (26%), Gaps = 53/185 (28%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P + P V E V C+ + WF N ++ +
Sbjct: 5 LPKAVVFLE----PQWYS----VLEKDSVTLKCQGAYSPEDN-STQWFHNESLISSQAS- 54
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI----------- 602
S +D DSGEY C+ + + +V L +
Sbjct: 55 ---------SYFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 105
Query: 603 ---------------VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
V + NGK + H FH I ++SG Y CR
Sbjct: 106 IHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFH-----IPKAT---LKDSGSYFCRGL 157
Query: 648 NKYGS 652
+
Sbjct: 158 VGSKN 162
Score = 52.2 bits (125), Expect = 2e-07
Identities = 30/152 (19%), Positives = 44/152 (28%), Gaps = 30/152 (19%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
T+WF N + + A + I A DSG Y + S S
Sbjct: 40 TQWFHNESLISSQAS----------SYFIDAATVNDSGEYRCQTNLSTLSDPV------- 82
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+L V+ + L E + H V +L NGK + H
Sbjct: 83 -QLEVHIGWLLLQAPRWVFK---EEDPIHLRCH-SWKNTALHKVTYLQNGKDRKYFHHNS 137
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 390
I ++D+G Y CR
Sbjct: 138 D--------FHIPKATLKDSGSYFCRGLVGSK 161
Score = 51.4 bits (123), Expect = 3e-07
Identities = 29/221 (13%), Positives = 58/221 (26%), Gaps = 72/221 (32%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
+C+ + + + + +WFHN +S+ + I+ + DSG Y C+
Sbjct: 27 LKCQGAYSPEDN-STQWFHNESLISSQASS----------YFIDAATVNDSGEYRCQTNL 75
Query: 996 KHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPV 1055
+ +L V + V
Sbjct: 76 --STLSDPVQLEVHIG----------------------------------WLLLQAPRWV 99
Query: 1056 FTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLD 1115
E +H C K+ ++ + NG+
Sbjct: 100 ----------FKEEDPIHLRCHS-WKNTALHKVTYLQNGKDRKYFHHNSD--------FH 140
Query: 1116 MDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDIVTES 1156
+ +DSG Y CR ++ I +T++
Sbjct: 141 IPKATLKDSGSYFCRGLVGSKNVSSETVNI------TITQA 175
Score = 51.0 bits (122), Expect = 4e-07
Identities = 30/195 (15%), Positives = 49/195 (25%), Gaps = 75/195 (38%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+ +WF N +S + + I++ +DS Y C+
Sbjct: 36 EDNSTQWFHNESLISSQAS----------SYFIDAATVNDSGEYRCQTNL---------- 75
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
S D + L V + + V KE + +
Sbjct: 76 ------------STLSDPVQLE----------------VHIGWLLLQAPRWVF-KEEDPI 106
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD 186
H C + N KV + NGK + +
Sbjct: 107 HLRCH------------------SWKNTALHKVTYLQNGKDRKYFHHNSDFH-------- 140
Query: 187 IAYVQSHDSGEYVCQ 201
I DSG Y C+
Sbjct: 141 IPKATLKDSGSYFCR 155
Score = 50.3 bits (120), Expect = 7e-07
Identities = 21/163 (12%), Positives = 44/163 (26%), Gaps = 40/163 (24%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQY 780
E ++ + + + + +WF N + + + I D G+Y
Sbjct: 21 EKDSVTLKCQGAYSPEDN-STQWFHNESLISSQAS----------SYFIDAATVNDSGEY 69
Query: 781 SCRAYNDYGEA-----VTSASMKVQGKRSIILESQ--------LPKGMEVFISFH----- 822
C+ V + +Q R + E +++
Sbjct: 70 RCQTNLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKD 129
Query: 823 ----------EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I +D G Y CR V+S ++ +
Sbjct: 130 RKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKN-VSSETVNIT 171
Score = 47.6 bits (113), Expect = 6e-06
Identities = 28/185 (15%), Positives = 46/185 (24%), Gaps = 58/185 (31%)
Query: 1422 KQPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDF 1480
+ P+ V ++ Q V E S +CQ + +WF N + + I
Sbjct: 3 EDLPKAVVFLEPQWYSVLEKDSVTLKCQ-GAYSPEDNSTQWFHNESLISSQASSYFIDA- 60
Query: 1481 GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
DSGEY C+ D + L+ ++
Sbjct: 61 ---------ATVNDSGEYRCQTNLSTLSDPVQ--LEVHIGWLLL---------------- 93
Query: 1541 EMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLIN 1599
Q +E +P C +V +L N
Sbjct: 94 ---------------------------QAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQN 126
Query: 1600 GHTIV 1604
G
Sbjct: 127 GKDRK 131
Score = 46.4 bits (110), Expect = 2e-05
Identities = 31/193 (16%), Positives = 47/193 (24%), Gaps = 47/193 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V E ++V C+ S + +WFHN I
Sbjct: 8 AVVFLEPQWYSVLEKDSVTLKCQGAYSP------------------EDNSTQWFHNESLI 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ-----------WFVNNKPLPAGAKFKT 217
+ I +DSGEY CQ V+ L A
Sbjct: 50 SSQASS----------YFIDAATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRWV 99
Query: 218 THDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
+ + L T + + N K I A +DSG
Sbjct: 100 FKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSD--------FHIPKATLKDSGS 151
Query: 278 YTVKATNSKGSAT 290
Y + + +
Sbjct: 152 YFCRGLVGSKNVS 164
Score = 42.6 bits (100), Expect = 3e-04
Identities = 17/116 (14%), Positives = 26/116 (22%), Gaps = 32/116 (27%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + W N I + I A V DSG Y C
Sbjct: 33 YSPEDNSTQWFHNESLISSQAS----------SYFIDAATVNDSGEYRCQTNL--STLSD 80
Query: 1827 EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+L V + + + KE + L+C
Sbjct: 81 PVQLEVHI-------------------GWLLLQAPRWV-FKEEDPIHLRCHSWKNT 116
Score = 42.2 bits (99), Expect = 4e-04
Identities = 21/183 (11%), Positives = 52/183 (28%), Gaps = 24/183 (13%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATET 1616
PK V +P+ V E + C + P W N I ++ +
Sbjct: 6 PK--AVVFLEPQWYSVLEKDSVTLKC-QGAYSPEDNSTQWFHNESLISSQ--ASSYFIDA 60
Query: 1617 TEMEHKGKIQERVVDASE-KPAK-----PPVFTKKIQPCRAFEQDQARFEVEFD-GDPLP 1669
+ G+ + + ++ P + + + + E+D L
Sbjct: 61 ATVNDSGEYRCQTNLSTLSDPVQLEVHIGWLLLQAPRW-VFKEEDPIHLRCHSWKNTALH 119
Query: 1670 TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR-GGKAKCSANLV 1728
+ + + S + + ++DSG + + + N+
Sbjct: 120 KVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNIT 171
Query: 1729 VEE 1731
+ +
Sbjct: 172 ITQ 174
Score = 41.8 bits (98), Expect = 6e-04
Identities = 11/63 (17%), Positives = 16/63 (25%), Gaps = 9/63 (14%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
K+ + +NG I DS Y C+ S T
Sbjct: 117 ALHKVTYLQNGKDRKYFHHNS--------DFHIPKATLKDSGSYFCRGLVGSKNVSSE-T 167
Query: 67 LKI 69
+ I
Sbjct: 168 VNI 170
Score = 41.4 bits (97), Expect = 7e-04
Identities = 27/168 (16%), Positives = 39/168 (23%), Gaps = 61/168 (36%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
S ID D GEY C+
Sbjct: 55 SYFIDAATVNDSGEYRCQTNLSTL------------------------------------ 78
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
+ + L + Q PR+V E C + KV
Sbjct: 79 ------SDPVQL--EVHIGWLLLQAPRWVF--------KEEDPIHLRCH-SWKNTALHKV 121
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYG 1507
+ NGK + + N + + +DSG Y CR
Sbjct: 122 TYLQNGKDRKYFHH-NSDF-------HIPKATLKDSGSYFCRGLVGSK 161
Score = 38.7 bits (90), Expect = 0.007
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 11/63 (17%)
Query: 1071 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 1130
V C+ + WF N ++ + S +D DSGEY C+
Sbjct: 24 SVTLKCQGAYSPEDN-STQWFHNESLISSQAS----------SYFIDAATVNDSGEYRCQ 72
Query: 1131 ATN 1133
Sbjct: 73 TNL 75
Score = 31.0 bits (70), Expect = 2.0
Identities = 6/25 (24%), Positives = 7/25 (28%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGE 1364
I +D G Y CR
Sbjct: 138 DFHIPKATLKDSGSYFCRGLVGSKN 162
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain,
cell adhesion, cell junction, glycoprotein,
immunoglobulin domain, membrane; HET: NAG FUC; 2.19A
{Mus musculus} PDB: 3mj7_A* 3mj9_A*
Length = 268
Score = 68.7 bits (167), Expect = 2e-12
Identities = 35/244 (14%), Positives = 61/244 (25%), Gaps = 57/244 (23%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLT-PVNDPELKVEWFHNGKPI-------------- 452
P T L G+S C + +V+W +
Sbjct: 5 LPGLTVSSPQLRVHV-GESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLS 63
Query: 453 ----FHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFH-QIR 505
+NR +V D + + VQ D G Y C + ++
Sbjct: 64 VPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLK----NESMVMKKPVELW 119
Query: 506 LPSPSQDNLDVPEAGKVHFDCRLEPKSDP-TMRIDWFFNGRPFATGS------------- 551
+ +L V C ++ + +++W F+
Sbjct: 120 VLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGK 179
Query: 552 ---------RVKTVYDF--GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLT 600
RV D S+ + V D G Y C + VL
Sbjct: 180 FQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTI-----VLH 234
Query: 601 VIVE 604
V+ +
Sbjct: 235 VVQD 238
Score = 65.3 bits (158), Expect = 3e-11
Identities = 33/252 (13%), Positives = 62/252 (24%), Gaps = 48/252 (19%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTND-PSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P + L + C + T + V+W + A + V
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVP 65
Query: 976 --------------------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGID 1015
L + DV D G+YTC+ K+ + +
Sbjct: 66 TGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL---- 121
Query: 1016 VEPQVSAIFANATKNIQKLEEALYRKDEL---IPDEEKPNPPVFTSQLQDNLDVPEAGKV 1072
+ + L + ++ I E+ E +
Sbjct: 122 ------------PEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVL 169
Query: 1073 HFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRAT 1132
+D + ++ F R TG + D S+ + V D G Y C
Sbjct: 170 SYDSNMRSGKFQSLGR---FRNRVDLTGDISRN--DG---SIKLQTVKESDQGIYTCSIY 221
Query: 1133 NKWGTAMTKAKV 1144
+ +
Sbjct: 222 VGKLESRKTIVL 233
Score = 64.9 bits (157), Expect = 3e-11
Identities = 42/327 (12%), Positives = 85/327 (25%), Gaps = 79/327 (24%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDD-PKLKVEWFWNGKPMKTGSRFRTFCDFGFV 765
P TV + + GE+ + T++ +V+W ++ + V
Sbjct: 6 PGLTVSSPQLR-VHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSV 64
Query: 766 ILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEIS 825
+ S++ +
Sbjct: 65 P------------------TGRFQNRSHLVGDTFHNDGSLL-----------------LQ 89
Query: 826 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGH 885
V D G Y+C V +++ + + P+ + + ++
Sbjct: 90 DVQKADEGIYTCEIRLKNESMVMKKPVELW------VLPEEPRDLRVRVGDTTQMRCSIQ 143
Query: 886 EREDRTIDKIAELEGYGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTND 945
E++ + K+ + G E+ + +L F R+ T D
Sbjct: 144 STEEKRVTKVNWMFSSGSHTEEETV--------LSYDSNMRSGKFQSLGRFRNRVDLTGD 195
Query: 946 PSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCK 1005
S ND +++ V D G+YTC E+ +
Sbjct: 196 ISR--------------------NDG---SIKLQTVKESDQGIYTCSIYVGKLESRKTIV 232
Query: 1006 LTVKGRQGIDVEPQVSAIFANATKNIQ 1032
L V + E Q + T Q
Sbjct: 233 LHV-----VQDEFQRTISPTPPTDKGQ 254
Score = 58.3 bits (140), Expect = 6e-09
Identities = 30/185 (16%), Positives = 54/185 (29%), Gaps = 39/185 (21%)
Query: 334 PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV-----LEILGTKIEDTGVYTCRATNK 388
D + V F Y+ + H G L + + D G+YTC K
Sbjct: 47 DKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLK 106
Query: 389 WGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL-KVEWFH 447
+ +E + +P ++ GD+ C++ + + KV W
Sbjct: 107 NESMVMKKPVE-LWVLPEEPRDLR--------VRVGDTTQMRCSIQSTEEKRVTKVNWMF 157
Query: 448 NGKP----------------------IFHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYV 483
+ +NRV + D + + V+ D G Y
Sbjct: 158 SSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYT 217
Query: 484 CRAWN 488
C +
Sbjct: 218 CSIYV 222
Score = 58.0 bits (139), Expect = 6e-09
Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 38/220 (17%)
Query: 599 LTVIVEWFYNGKKLPHGHRYR---------TFHDFGIVILDILYCYEENSGVYECRATNK 649
+ V ++Y+ +P G R++ +D +++ D+ + + G+Y C K
Sbjct: 51 ASEYVLFYYSNLSVPTG-RFQNRSHLVGDTFHNDGSLLLQDVQ---KADEGIYTCEIRLK 106
Query: 650 YGSDVTKASLKCVSKTNLILESQLPEGMEGGLE-KIQTLEDAAHLRRT-ETADIEHRQAP 707
S V K ++ + ++ G + IQ+ E+ + + H +
Sbjct: 107 NESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEE 166
Query: 708 VFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVIL 767
SN+ + F R+ T D GS +
Sbjct: 167 TVLSYDSNMRSGKFQSLGRFRNRVDLTGDI-----------SRNDGS------------I 203
Query: 768 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIIL 807
++ V D G Y+C Y E+ + + V
Sbjct: 204 KLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRT 243
Score = 56.4 bits (135), Expect = 2e-08
Identities = 25/229 (10%), Positives = 56/229 (24%), Gaps = 60/229 (26%)
Query: 1664 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI--------------------LIMRQVF 1703
+ + + W +S + + L+++ V
Sbjct: 33 EEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQ 92
Query: 1704 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFD 1763
D G++ + + + V P + + VG +
Sbjct: 93 KADEGIYTCEIRLKNESMVMKKPVEL----------WVLPEEPRDLR---VRVGDTTQMR 139
Query: 1764 AKISATKPLD---VYWLKNGKKIIPDIRYKTLEED------------------------N 1796
I +T+ V W+ + + + + + N
Sbjct: 140 CSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRN 199
Query: 1797 LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAP 1845
++ + D G Y C E+R L V + +P P
Sbjct: 200 DGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRTISPTP 248
Score = 53.7 bits (128), Expect = 2e-07
Identities = 32/229 (13%), Positives = 48/229 (20%), Gaps = 79/229 (34%)
Query: 513 NLDVPEAGKVHFDCRL-EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI--------- 562
L V V C + + R+DW F+ V Y +
Sbjct: 14 QLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRS 73
Query: 563 -----------SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI--------- 602
SL + V D G Y C K + + K V VL
Sbjct: 74 HLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPEEPRDLRVRVG 133
Query: 603 -------------------VEWFYNGKKLPHGHRYRTFH--------------------- 622
V W ++ ++
Sbjct: 134 DTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLT 193
Query: 623 ------DFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCVSKT 665
D I + + E + G+Y C L V
Sbjct: 194 GDISRNDGSIKLQTV---KESDQGIYTCSIYVGKLESRKTIVLHVVQDE 239
Score = 53.0 bits (126), Expect = 3e-07
Identities = 23/166 (13%), Positives = 44/166 (26%), Gaps = 45/166 (27%)
Query: 1740 VVPPSFLTTISSAVINVGQLARFDAKISATK---PLDVYWLKNGKKI------------- 1783
P + ++VG+ + T+ V WL + K
Sbjct: 3 QGLPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNL 62
Query: 1784 -IPDIRYK------TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
+P R++ N +LL+ + D G Y C + + +
Sbjct: 63 SVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELW--- 119
Query: 1837 APGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ E +D V+ G ++C I
Sbjct: 120 -------------------VLPEEPRDLRVRVGDTTQMRCSIQSTE 146
Score = 49.5 bits (117), Expect = 4e-06
Identities = 34/265 (12%), Positives = 60/265 (22%), Gaps = 37/265 (13%)
Query: 1264 PPRFITEIESVTVQEAEPVRFE---TRVEPRVDPR---LRVECSLSTAFFFPFINISTAF 1317
P + V E V R E + R L + + + F + +
Sbjct: 5 LPGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSV 64
Query: 1318 LIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
F + + + G SL + V D+G Y C + K + +P
Sbjct: 65 PTGRFQNRSHLVGDTFHNDG--SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP 122
Query: 1378 TIQLQNQVPKGMLKTEALIQME-AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQ 1436
+V G QM + + + ++
Sbjct: 123 EEPRDLRVRVGD-----TTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRS 177
Query: 1437 LVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSG 1496
+F ++ GD + D V D G
Sbjct: 178 GKFQSLGRFRNRVDLTGDISRN--------------------DGSIKLQT---VKESDQG 214
Query: 1497 EYLCRATNLYGMDETRAILKTTGKP 1521
Y C +L
Sbjct: 215 IYTCSIYVGKLESRKTIVLHVVQDE 239
Score = 47.2 bits (111), Expect = 2e-05
Identities = 32/262 (12%), Positives = 63/262 (24%), Gaps = 71/262 (27%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CT--RVTGYPRPRVMWLINGHTIVNEIVRKITATETTEM 1619
P +V GE C R RV WL + ++ + +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDK--DDASEYVLFYYSNLS 63
Query: 1620 EHKGKIQERVV--------DAS---------------------------EKPAKPPVFTK 1644
G+ Q R D S +KP + V +
Sbjct: 64 VPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLPE 123
Query: 1645 KIQPCRAFEQDQARFEVEFDGDPLP---TIKWFREDFPITSSPDFQIHTFSTKSI----- 1696
+ + R D + + W T + + +S
Sbjct: 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSL 183
Query: 1697 -------------------LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGR 1737
+ ++ V D G++ +++ + L V +
Sbjct: 184 GRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQDEFQRT 243
Query: 1738 GGVVPPSFLT-TISSAVINVGQ 1758
+ P+ T ++N Q
Sbjct: 244 ---ISPTPPTDKGQQGILNGNQ 262
Score = 45.6 bits (107), Expect = 7e-05
Identities = 23/227 (10%), Positives = 57/227 (25%), Gaps = 67/227 (29%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV--------------------TLSINSL 42
+++W + + + V +L + +
Sbjct: 32 TEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDV 91
Query: 43 RADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEP 102
+ D IYTC+ V +++
Sbjct: 92 QKADEGIYTCEIRLKNESMVMKKPVELW-------------------------------- 119
Query: 103 ELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWF 162
V D+ + + C ++ +++ + + + + E + +
Sbjct: 120 -------VLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYD 172
Query: 163 HNGKPIF------HKNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCQ 201
N + +NRV + D + + V+ D G Y C
Sbjct: 173 SNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCS 219
Score = 44.9 bits (105), Expect = 1e-04
Identities = 29/247 (11%), Positives = 54/247 (21%), Gaps = 77/247 (31%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
P + E+V C V+ +++ +V+W +
Sbjct: 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEE----------------KHVDRVDWLFSKDKD 49
Query: 169 ------------------FHKNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCQWFVNNKP 208
+NR +V D + + VQ D G Y C+ + K
Sbjct: 50 DASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCE--IRLKN 107
Query: 209 LPAGAKFKTT-------HDFGYVALDIELMLK--------TLVPFTEWFVNNKPLPAGAK 253
K V + ++ V W ++
Sbjct: 108 ESMVMKKPVELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEET 167
Query: 254 FKTTHDFGYVA------------------------LDIVGAYAEDSGIYTVKATNSKGSA 289
+ + + D GIYT K +
Sbjct: 168 VLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLES 227
Query: 290 TTSGTLK 296
+ L
Sbjct: 228 RKTIVLH 234
Score = 44.9 bits (105), Expect = 1e-04
Identities = 22/113 (19%), Positives = 30/113 (26%), Gaps = 22/113 (19%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRL-EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF 1111
P T L V V C + + R+DW F+ V Y
Sbjct: 5 LPGLTVS-SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLS 63
Query: 1112 I--------------------SLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+ SL + V D G Y C K + + K V
Sbjct: 64 VPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPV 116
Score = 44.5 bits (104), Expect = 2e-04
Identities = 26/194 (13%), Positives = 48/194 (24%), Gaps = 37/194 (19%)
Query: 1424 PPRFVTQIKTQDQLVEM-QSTKFECQL-APVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
P + V + +S C + +V+W + Y
Sbjct: 5 LPGLTVS--SPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNL 62
Query: 1482 YVA--------------------MNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
V + V D G Y C + ++ P
Sbjct: 63 SVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP 122
Query: 1522 GIIYESQLPKGM--------KSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQK 1573
+ ++ G +S E+ R + +W + E+E V +
Sbjct: 123 EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEE-----TVLSYDSNMRS 177
Query: 1574 VQEGEPARFCTRVT 1587
+ RF RV
Sbjct: 178 GKFQSLGRFRNRVD 191
Score = 42.9 bits (100), Expect = 6e-04
Identities = 27/205 (13%), Positives = 60/205 (29%), Gaps = 49/205 (23%)
Query: 241 WFVNNKPLPAG-----AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSG-- 293
++ +N +P G + +L + D GIYT + S
Sbjct: 57 FYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKADEGIYTCEIRLKNESMVMKKPV 116
Query: 294 --------------------TLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLI 333
++C + + F S+ E + +++++
Sbjct: 117 ELWVLPEEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMR 176
Query: 334 PVGDQTMT-----VEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK 388
Q++ V+ + + S +++TV D G+YTC
Sbjct: 177 SGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKE-------------SDQGIYTCSIYVG 223
Query: 389 WGQAEISVNLECVDKSKGQPPKFTS 413
++ ++ L V + T
Sbjct: 224 KLESRKTIVLHVVQD----EFQRTI 244
Score = 41.4 bits (96), Expect = 0.002
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
R+ + F+N V L+ ++ + +++ D IYTC E+
Sbjct: 176 RSGKFQSLGRFRNRVDLT------GDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRK 229
Query: 64 TCTLKI 69
T L +
Sbjct: 230 TIVLHV 235
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus}
SCOP: b.1.1.1 b.1.1.3
Length = 176
Score = 66.1 bits (161), Expect = 3e-12
Identities = 22/174 (12%), Positives = 46/174 (26%), Gaps = 29/174 (16%)
Query: 322 EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV-------LEILGTK 374
G + + D V + + R L+I
Sbjct: 10 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLT 69
Query: 375 IEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLT 434
+D+G Y + G ++ L+ P + +A C +
Sbjct: 70 RDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYW---------ECSNATLTCEVL 120
Query: 435 PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
D ELK + + + + ++Y ++ + C+A N
Sbjct: 121 EGTDVELK--LYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVN 161
Score = 65.0 bits (158), Expect = 7e-12
Identities = 22/181 (12%), Positives = 44/181 (24%), Gaps = 25/181 (13%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMD-----IAYVQS 476
G + + D +V W + F + + F ++ I +
Sbjct: 11 GHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTR 70
Query: 477 HDSGEYVCRAWNNFIFIPPFPIFIFH-QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPT 535
DSG Y ++ + P E C + +D
Sbjct: 71 DDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMI----YWECSNATLTCEVLEGTDVE 126
Query: 536 MRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
+ + + + M Y + + C+A N+ V
Sbjct: 127 --LKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVN 173
Query: 596 C 596
C
Sbjct: 174 C 174
Score = 60.4 bits (146), Expect = 3e-10
Identities = 20/176 (11%), Positives = 50/176 (28%), Gaps = 33/176 (18%)
Query: 1665 GDPLPTIKWFREDFPITS--------SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 1716
D + ++W R + + + I + + +DSG + V +
Sbjct: 24 TDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKI-KNLTRDDSGTYNVTVYS 82
Query: 1717 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 1776
G + L + V P S+A + ++ +++
Sbjct: 83 TNGTRILNKALDLRILEM-----VSKPMIYWECSNATLTC--------EVLEGTDVELKL 129
Query: 1777 LKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
+ + + +R KT+ ++C A+N + +
Sbjct: 130 YQGKE-HLRSLRQKTMSYQW----------TNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 60.4 bits (146), Expect = 3e-10
Identities = 24/218 (11%), Positives = 46/218 (21%), Gaps = 66/218 (30%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI-------LEINDVYLRDSGL 988
D V W ++ R L+I ++ DSG
Sbjct: 16 LNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGT 75
Query: 989 YTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDE 1048
Y + +G + L ++
Sbjct: 76 YNVTVYSTNGTRILNKALDLR-------------------------------------IL 98
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
E + P+ E C + +D + + + +
Sbjct: 99 EMVSKPMIYW---------ECSNATLTCEVLEGTDVE--LKLYQGKEHLRSLRQ------ 141
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVIC 1146
M Y + + C+A N+ V C
Sbjct: 142 -----KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 58.8 bits (142), Expect = 9e-10
Identities = 22/176 (12%), Positives = 47/176 (26%), Gaps = 47/176 (26%)
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRVKTVYDFGFISLDMDYVY 570
++ + +D + W A S + G L + +
Sbjct: 12 HGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG--DLKIKNLT 69
Query: 571 ARDSGEYICRATNKWGTAMTKAKVI----------------------CKVL---TVIVEW 605
DSG Y + GT + + C+VL V ++
Sbjct: 70 RDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELKL 129
Query: 606 FYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+ + L + + Y + ++C+A N+ + + C
Sbjct: 130 YQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 49.2 bits (117), Expect = 2e-06
Identities = 24/212 (11%), Positives = 51/212 (24%), Gaps = 78/212 (36%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKAT 55
D ++ W + ++ R F L I +L DDS Y
Sbjct: 22 QMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVY 81
Query: 56 NLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL 115
+ G + L + +E + KP I
Sbjct: 82 STNGTRILNKALDLRI----------------LEMVSKPM----------------IYW- 108
Query: 116 NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVK 175
E N C V +++++ + + + +
Sbjct: 109 ------ECSNATLTCEVL-------------------EGTDVELKLYQGKEHLRSLRQ-- 141
Query: 176 MVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK 207
++Y ++ + C+ N+
Sbjct: 142 ---------KTMSYQWTNLRAPFKCK--AVNR 162
Score = 48.8 bits (116), Expect = 2e-06
Identities = 20/168 (11%), Positives = 48/168 (28%), Gaps = 37/168 (22%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGK----------PMKTGSRFRTFCDFGFVILEIS 770
G + D +V W P F + L+I
Sbjct: 10 LGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGD---LKIK 66
Query: 771 PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR------------SIILESQLPKGMEVF 818
+ +D G Y+ Y+ G + + ++ ++ + L ++ +G +V
Sbjct: 67 NLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVE 126
Query: 819 ISFHE------------ISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
+ ++ +S + + C+A N + +
Sbjct: 127 LKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 46.9 bits (111), Expect = 1e-05
Identities = 20/162 (12%), Positives = 44/162 (27%), Gaps = 27/162 (16%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
E+ KP F+ + L I +DSG Y V ++ G+ + L
Sbjct: 40 AEFKRKMKPFLKSGAFEILANG---DLKIKNLTRDDSGTYNVTVYSTNGTRILNKALD-- 94
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+ + E A + + + ++ + + + +
Sbjct: 95 ----LRILEMVSKPMIYW-----ECSNATLTCEV--LEGTDVELKLYQGKEHLRSLRQ-- 141
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
+ + C+A N+ Q + C
Sbjct: 142 ---------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 46.1 bits (109), Expect = 2e-05
Identities = 21/171 (12%), Positives = 43/171 (25%), Gaps = 30/171 (17%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVVMD-----IAYVQSHDSGE 197
L + D +V W + F + + F ++ I + DSG
Sbjct: 16 LNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGT 75
Query: 198 YVCQWFVNNKPLPAGAKF-----------KTTHDFGYVALDIELMLKTLVPFTEWFVNNK 246
Y + N + L E++ T V + +
Sbjct: 76 YNVTVYSTNGTRILNKALDLRILEMVSKPMIYWECSNATLTCEVLEGTDVELK-LYQGKE 134
Query: 247 PLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
L + + ++ + + KA N + + C
Sbjct: 135 HLRSLRQKTMSYQWT-----------NLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 45.3 bits (107), Expect = 4e-05
Identities = 19/117 (16%), Positives = 31/117 (26%), Gaps = 29/117 (24%)
Query: 1773 DVYWLKNGKKII-------PDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEAR 1825
+V W + + P ++ E L I +DSG Y + G
Sbjct: 29 EVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRI 88
Query: 1826 CEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
L ++ + K P + E S TL C +
Sbjct: 89 LNKALDLRILEMVSK--------------PMI--------YWECSNATLTCEVLEGT 123
Score = 42.3 bits (99), Expect = 4e-04
Identities = 10/94 (10%), Positives = 30/94 (31%), Gaps = 15/94 (15%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
+ E ++ P E + A C + + ++ + + L + +
Sbjct: 96 RILEMVSKPM--IYWECSNATLTCEVL--EGTDVELKLYQGKEHLRSLRQ---------- 141
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
++ + + CKA N+ + + +
Sbjct: 142 -KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174
Score = 41.9 bits (98), Expect = 6e-04
Identities = 17/165 (10%), Positives = 38/165 (23%), Gaps = 65/165 (39%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L I + +D G Y Y+ +G +
Sbjct: 62 DLKIKNLTRDDSGTYNVTVYSTNGTRILNKAL---------------------------- 93
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
DL E P E + C++ + ++++
Sbjct: 94 ---------------DLRILEMVSKPMIY---------WECSNATLTCEV--LEGTDVEL 127
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATN 1504
+ + + L + + + + C+A N
Sbjct: 128 KLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVN 161
Score = 39.9 bits (93), Expect = 0.002
Identities = 12/84 (14%), Positives = 23/84 (27%), Gaps = 11/84 (13%)
Query: 1070 GKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRVKTVYDFGFISLDMDYVY 1120
++ + +D + W A S + G L + +
Sbjct: 12 HGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANG--DLKIKNLT 69
Query: 1121 ARDSGEYICRATNKWGTAMTKAKV 1144
DSG Y + GT + +
Sbjct: 70 RDDSGTYNVTVYSTNGTRILNKAL 93
Score = 39.2 bits (91), Expect = 0.005
Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 11/63 (17%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+++++ ++ L + T+S + A + CKA N + +
Sbjct: 122 GTDVELKLYQGKEHLRSLRQK---------TMSYQWT--NLRAPFKCKAVNRVSQESEME 170
Query: 66 TLK 68
+
Sbjct: 171 VVN 173
Score = 33.4 bits (76), Expect = 0.35
Identities = 19/184 (10%), Positives = 34/184 (18%), Gaps = 52/184 (28%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLP-HKNRFNPIYDFGYVAMNFGW------VYPE 1493
+ D +V W + K + P G + + +
Sbjct: 12 HGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRD 71
Query: 1494 DSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQL 1553
DSG Y + G L
Sbjct: 72 DSGTYNVTVYSTNGTRILNKALDLRILE-------------------------------- 99
Query: 1554 VEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITA 1613
VS+P E A V + + + + ++
Sbjct: 100 -----------MVSKP--MIYWECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQKTMSY 146
Query: 1614 TETT 1617
T
Sbjct: 147 QWTN 150
Score = 32.6 bits (74), Expect = 0.58
Identities = 6/35 (17%), Positives = 17/35 (48%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 857
+I + +D G Y+ Y+ G + + ++ ++
Sbjct: 64 KIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRIL 98
Score = 30.3 bits (68), Expect = 3.6
Identities = 5/36 (13%), Positives = 14/36 (38%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKK 1375
+ Y + + + C+A N + ++C +
Sbjct: 141 QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCPE 176
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse;
HET: NAG BMA MAN; 3.25A {Homo sapiens}
Length = 440
Score = 69.8 bits (171), Expect = 4e-12
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 910 EEDLG-KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGS---R 964
+ AP + P DL + E A +CR + +V W NG ++ G+ R
Sbjct: 334 QNYFTCYAPVIVEPPADLNVTEGMAAELKCR---ASTSLTSVSWITPNGTVMTHGAYKVR 390
Query: 965 IKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
I ++D G L +V ++D+G+YTC +N G T S L V G
Sbjct: 391 IAVLSD-G--TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTG 433
Score = 57.8 bits (140), Expect = 2e-08
Identities = 22/95 (23%), Positives = 35/95 (36%), Gaps = 8/95 (8%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK-NGKKIIPD---IRYKTLEEDNL 1797
P + + + G A + S + V W+ NG + +R L +
Sbjct: 341 APVIVEPPADLNVTEGMAAELKCRASTSLT-SVSWITPNGTVMTHGAYKVRIAVLSDG-- 397
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
TL V+D+G Y C+ N+ G A L V
Sbjct: 398 -TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431
Score = 49.7 bits (119), Expect = 6e-06
Identities = 25/96 (26%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGS---RVKTVYD 1108
PV D L+V E CR S + W NG G+ R+ V
Sbjct: 341 APVIVEPPAD-LNVTEGMAAELKCRA---STSLTSVSWITPNGTVMTHGAYKVRI-AVLS 395
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
G +L+ V +D+G Y C +N G A +
Sbjct: 396 DG--TLNFTNVTVQDTGMYTCMVSNSVGNTTASATL 429
Score = 49.0 bits (117), Expect = 1e-05
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFW-NGKPMKTGS---RFRTFC 760
APV P ++++ + EG A + R V W NG M G+ R
Sbjct: 340 YAPVIVEPPADLN-VTEGMAAELKCR---ASTSLTSVSWITPNGTVMTHGAYKVRIAVLS 395
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 801
D G L + V +D G Y+C N G SA++ V G
Sbjct: 396 D-G--TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTG 433
Score = 49.0 bits (117), Expect = 1e-05
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 10/86 (11%)
Query: 513 NLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGS---RVKTVYDFGFISLDMDY 568
+L+V E CR S + W NG G+ R+ V G +L+
Sbjct: 350 DLNVTEGMAAELKCRA---STSLTSVSWITPNGTVMTHGAYKVRI-AVLSDG--TLNFTN 403
Query: 569 VYARDSGEYICRATNKWGTAMTKAKV 594
V +D+G Y C +N G A +
Sbjct: 404 VTVQDTGMYTCMVSNSVGNTTASATL 429
Score = 47.8 bits (114), Expect = 2e-05
Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 17/98 (17%)
Query: 397 NLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHK 455
C P L + G +A +C + V W NG + H
Sbjct: 336 YFTC------YAPVIVEPPADLNVTE-GMAAELKC---RASTSLTSVSWITPNGTVMTHG 385
Query: 456 ---NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF 490
R+ ++SD G ++ V D+G Y C N+
Sbjct: 386 AYKVRIAVLSD-G--TLNFTNVTVQDTGMYTCMVSNSV 420
Score = 46.3 bits (110), Expect = 8e-05
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFL-NGKPLPHKNRFNPIYDFG 1481
P V + E + + +C+ V W NG + H I
Sbjct: 340 YAPVIVEPPADL-NVTEGMAAELKCR---ASTSLTSVSWITPNGTVMTHGAYKVRIAVLS 395
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+NF V +D+G Y C +N G A L TG
Sbjct: 396 DGTLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTH 435
Score = 42.8 bits (101), Expect = 0.001
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 5 ADPNLKIEWFK-NGVPLSLGS---RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ + W NG ++ G+ RI D G TL+ ++ D+ +YTC +N +G
Sbjct: 366 STSLTSVSWITPNGTVMTHGAYKVRIAVLSD-G--TLNFTNVTVQDTGMYTCMVSNSVGN 422
Query: 61 AVSTCTLKI 69
++ TL +
Sbjct: 423 TTASATLNV 431
Score = 42.4 bits (100), Expect = 0.001
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 9/94 (9%)
Query: 319 NLSEGEIAHFEASLIPVGDQTMTVE-FLYNGKPI-EASHRIR-TVHAFGMVVLEILGTKI 375
N++EG A + +V NG + ++++R V + G L +
Sbjct: 352 NVTEGMAAELKCR---ASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGT--LNFTNVTV 406
Query: 376 EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
+DTG+YTC +N G S L V +
Sbjct: 407 QDTGMYTCMVSNSVGNTTASATLN-VTGTHHHHH 439
Score = 41.7 bits (98), Expect = 0.002
Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 4/93 (4%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPITSSPDFQIHTFSTKSI 1696
PV + E A + L ++ W + + +I S
Sbjct: 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSD-GT 398
Query: 1697 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
L V ++D+G++ + N G SA L V
Sbjct: 399 LNFTNVTVQDTGMYTCMVSNSVGNTTASATLNV 431
Score = 40.1 bits (94), Expect = 0.006
Identities = 24/124 (19%), Positives = 37/124 (29%), Gaps = 32/124 (25%)
Query: 100 DEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKV 159
D+ +PV + D+ E CR V
Sbjct: 333 DQNYFTCYAPVIVEPPADLNVTEGMAAELKCRAS--------------------TSLTSV 372
Query: 160 EWFH-NGKPIFHK---NRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKF 215
W NG + H R+ ++SD G ++ V D+G Y C V+N G
Sbjct: 373 SWITPNGTVMTHGAYKVRIAVLSD-G--TLNFTNVTVQDTGMYTC--MVSN---SVGNTT 424
Query: 216 KTTH 219
+
Sbjct: 425 ASAT 428
Score = 39.3 bits (92), Expect = 0.012
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
Query: 608 NGKKLPHGH---RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
NG + HG R D G L+ +++G+Y C +N G+ A+L
Sbjct: 378 NGTVMTHGAYKVRIAVLSD-GT--LNFTNVTVQDTGMYTCMVSNSVGNTTASATL 429
Score = 39.0 bits (91), Expect = 0.014
Identities = 10/38 (26%), Positives = 15/38 (39%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
+L+ V +D G Y C N G AT++
Sbjct: 398 TLNFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTGTH 435
Score = 35.1 bits (81), Expect = 0.24
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
+ V +D G Y+C N G SA++ V G
Sbjct: 400 NFTNVTVQDTGMYTCMVSNSVGNTTASATLNVTG 433
Score = 33.2 bits (76), Expect = 0.83
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
L+ +D+G+YT +NS G+ T S TL
Sbjct: 399 LNFTNVTVQDTGMYTCMVSNSVGNTTASATL 429
Score = 31.3 bits (71), Expect = 3.2
Identities = 14/30 (46%), Positives = 16/30 (53%)
Query: 1853 EAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
AP + EP D NV EG A LKCR +
Sbjct: 340 YAPVIVEPPADLNVTEGMAAELKCRASTSL 369
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain, membrane,
transmembrane, receptor; 1.60A {Mus musculus} PDB:
3bp5_B 3rnq_B 3bov_A 3rnk_B
Length = 202
Score = 66.2 bits (161), Expect = 4e-12
Identities = 32/181 (17%), Positives = 52/181 (28%), Gaps = 16/181 (8%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIF------HKNRVKMVSDF---GFVVMDIAYV 474
G S EC E +E R ++ + G + I V
Sbjct: 17 GSSVSLECDFDRRECTE--LEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSV 74
Query: 475 QSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDP 534
Q DSG+Y C + + + L+VP G+V C+ P
Sbjct: 75 QVRDSGQYRCLVICG-AAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQAR--GYP 131
Query: 535 TMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 594
+ W P T + S+ + + S + C N +T A +
Sbjct: 132 LAEVSWQNVSVPANTSHIRTPEGLYQVTSVLR--LKPQPSRNFSCMFWNAHMKELTSAII 189
Query: 595 I 595
Sbjct: 190 D 190
Score = 62.4 bits (151), Expect = 8e-11
Identities = 22/162 (13%), Positives = 43/162 (26%), Gaps = 20/162 (12%)
Query: 336 GDQTMTVEFLYNGKPIE----ASHRIRTVH-----AFGMVVLEILGTKIEDTGVYTCRAT 386
+ +E + + R G + I ++ D+G Y C
Sbjct: 28 RRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87
Query: 387 NKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWF 446
+ + K + + LE G C P +V W
Sbjct: 88 CGAAWDYKYLTV------KVKASYMRIDTRILEVPGTG-EVQLTCQAR--GYPLAEVSWQ 138
Query: 447 HNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ P + + + V + ++ S + C WN
Sbjct: 139 NVSVPANTSHIR--TPEGLYQVTSVLRLKPQPSRNFSCMFWN 178
Score = 55.8 bits (134), Expect = 1e-08
Identities = 33/236 (13%), Positives = 59/236 (25%), Gaps = 62/236 (26%)
Query: 921 TTPTDLTLAE--STLAHFECRLTPTNDPSMTVEWFHNGKALSAG------SRIKTINDF- 971
T P ++ + S+ EC +E R + +
Sbjct: 6 TAPKEVYTVDVGSS-VSLECDFDR--RECTELEGIRASLQKVENDTSLQSERATLLEEQL 62
Query: 972 --GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATK 1029
G + I V +RDSG Y C + VK + ++ ++
Sbjct: 63 PLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVK-ASYMRIDTRIL-------- 113
Query: 1030 NIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRID 1089
+VP G+V C+ P +
Sbjct: 114 -----------------------------------EVPGTGEVQLTCQAR--GYPLAEVS 136
Query: 1090 WFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
W P T + S+ + + S + C N +T A +
Sbjct: 137 WQNVSVPANTSHIRTPEGLYQVTSVLR--LKPQPSRNFSCMFWNAHMKELTSAIID 190
Score = 52.4 bits (125), Expect = 2e-07
Identities = 22/178 (12%), Positives = 33/178 (18%), Gaps = 54/178 (30%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLP------HKNRFNPIYDF---GYVAMNFGWVY 1491
S EC ++E R + + G + V
Sbjct: 18 SSVSLECDFDR--RECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQ 75
Query: 1492 PEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREMEASWQHTPE 1551
DSG+Y C D +K I
Sbjct: 76 VRDSGQYRCLVICGAAWDYKYLTVKVKASYMRI--------------------------- 108
Query: 1552 QLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVR 1609
+V + + GYP V W +R
Sbjct: 109 ----------------DTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANTSHIR 150
Score = 51.6 bits (123), Expect = 4e-07
Identities = 18/186 (9%), Positives = 44/186 (23%), Gaps = 24/186 (12%)
Query: 1663 FDGDPLPTIKWFREDFPITSSPDFQIH---TFSTKSI------LIMRQVFMEDSGVFAVI 1713
FD ++ R + T + + + V + DSG + +
Sbjct: 26 FDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85
Query: 1714 AENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD 1773
+ V+ + + + +
Sbjct: 86 VICGAAWDYKYLTVKVK-----------ASYMRIDTRILEVPGTGEVQLTCQARGYPLAE 134
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLFTLL-IIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
V W + L+ + ++ + S + C+ N + A +
Sbjct: 135 VSWQNVSVPANTSH---IRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIIDP 191
Query: 1833 QSKKAP 1838
S+ P
Sbjct: 192 LSRMEP 197
Score = 51.2 bits (122), Expect = 5e-07
Identities = 29/196 (14%), Positives = 53/196 (27%), Gaps = 49/196 (25%)
Query: 708 VFTV--PLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTG---------SRF 756
+FTV P + G + E ++E +
Sbjct: 2 LFTVTAPKEVYT-VDVGSSVSLECDFDR--RECTELEGIRASLQKVENDTSLQSERATLL 58
Query: 757 RTFCDFGFVILEISPVYPEDCGQYSCRAYND--YGEAVTSASMKVQGKRSIILESQLPKG 814
G + I V D GQY C + + +K R ++P
Sbjct: 59 EEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGT 118
Query: 815 MEVFI----------------------SFHEISP-----------VYPEDCGQYSCRAYN 841
EV + + H +P + P+ +SC +N
Sbjct: 119 GEVQLTCQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWN 178
Query: 842 DYGEAVTSASMKVQGK 857
+ + +TSA + +
Sbjct: 179 AHMKELTSAIIDPLSR 194
Score = 49.7 bits (118), Expect = 2e-06
Identities = 23/188 (12%), Positives = 43/188 (22%), Gaps = 46/188 (24%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG------SRVKTVYDF---GF 561
++ V V +C + ++ R + + G
Sbjct: 9 KEVYTVDVGSSVSLECDFDR--RECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGK 66
Query: 562 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVI------------------- 602
+ V RDSG+Y C V K +
Sbjct: 67 ALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQ 126
Query: 603 --------VEWFYNGKKLPHGHR---YRTFHDFGIVILDILYCYEENSGVYECRATNKYG 651
V W H + ++ L + S + C N +
Sbjct: 127 ARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLK-----PQPSRNFSCMFWNAHM 181
Query: 652 SDVTKASL 659
++T A +
Sbjct: 182 KELTSAII 189
Score = 47.7 bits (113), Expect = 8e-06
Identities = 20/195 (10%), Positives = 46/195 (23%), Gaps = 36/195 (18%)
Query: 1569 PEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNE--------------------- 1606
E V G C + + V
Sbjct: 9 KEVYTVDVGSSVSLEC-DFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKA 67
Query: 1607 --IVRKITATE----TTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFE 1660
+ + + + + + K + + + + +
Sbjct: 68 LFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRI---DTRILEVPGTGEVQLT 124
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIH-TFSTKSILIMRQVFMEDSGVFAVIAENRGG 1719
+ G PL + W P +S + S+L ++ + S F+ + N
Sbjct: 125 CQARGYPLAEVSWQNVSVPANTSHIRTPEGLYQVTSVLRLKP---QPSRNFSCMFWNAHM 181
Query: 1720 KAKCSANLVVEEKRQ 1734
K SA + + +
Sbjct: 182 KELTSAIIDPLSRME 196
Score = 47.3 bits (112), Expect = 1e-05
Identities = 23/140 (16%), Positives = 42/140 (30%), Gaps = 29/140 (20%)
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYK-----TLEEDNL----FTLLII 1803
++VG + + ++ ++ + + + TL E+ L I
Sbjct: 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIP 72
Query: 1804 EAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKD 1863
V DSG Y C+ + A L V+ K + + +
Sbjct: 73 SVQVRDSGQYRCLVICGAAWD--YKYLTVKVKASYMRIDT------------------RI 112
Query: 1864 QNVKEGSAVTLKCRITGKPR 1883
V V L C+ G P
Sbjct: 113 LEVPGTGEVQLTCQARGYPL 132
Score = 46.2 bits (109), Expect = 3e-05
Identities = 22/169 (13%), Positives = 42/169 (24%), Gaps = 19/169 (11%)
Query: 235 LVPFTEWFVNNKPLPAG--AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
+ + N+ L + + G I DSG Y
Sbjct: 37 IRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWDYKY 96
Query: 293 GTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTVEFLYNGKP 350
T+K + + + +A P V + P
Sbjct: 97 LTVK---------VKASYMRIDTRILEVPGTGEVQLTCQARGYP----LAEVSWQNVSVP 143
Query: 351 IEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
SH + V +L K + + ++C N + S ++
Sbjct: 144 ANTSHIRTPEGLY--QVTSVLRLKPQPSRNFSCMFWNAHMKELTSAIID 190
Score = 45.0 bits (106), Expect = 7e-05
Identities = 25/195 (12%), Positives = 42/195 (21%), Gaps = 54/195 (27%)
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVP 1386
LG I V D G+Y C
Sbjct: 55 ATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAA----------------------- 91
Query: 1387 KGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFE 1446
+ ++ + + E +
Sbjct: 92 ----WDYKYLTVKVKASYMRIDTRILEV-----------------------PGTGEVQLT 124
Query: 1447 CQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLY 1506
CQ G P +V W P + P + V + P+ S + C N +
Sbjct: 125 CQAR--GYPLAEVSWQNVSVPANTSHIRTPEGLY-QVTSVLR-LKPQPSRNFSCMFWNAH 180
Query: 1507 GMDETRAILKTTGKP 1521
+ T AI+ +
Sbjct: 181 MKELTSAIIDPLSRM 195
Score = 43.5 bits (102), Expect = 2e-04
Identities = 28/174 (16%), Positives = 47/174 (27%), Gaps = 29/174 (16%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPIF------HKNRVKMVSDF---GFVVMDIAYVQSHDS 195
L C E +E R ++ + G + I VQ DS
Sbjct: 22 LECDFDRRECTE--LEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDS 79
Query: 196 GEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLK------TLV--------PFTEW 241
G+Y C V Y+ +D ++ L W
Sbjct: 80 GQYRC--LVICGAAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSW 137
Query: 242 FVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
N +PA T + Y ++ + S ++ N+ TS +
Sbjct: 138 Q--NVSVPANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAII 189
Score = 42.7 bits (100), Expect = 4e-04
Identities = 24/213 (11%), Positives = 47/213 (22%), Gaps = 69/213 (32%)
Query: 6 DPNLKIEWFKNGVPLSLG---------SRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
++E + + + + G I S++ DS Y C
Sbjct: 29 RECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVIC 88
Query: 57 LLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLN 116
T+K++ + LE P
Sbjct: 89 GAAWDYKYLTVKVKASYM----------RIDTRILEVP---------------------- 116
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
V C+ G P +V W + P +
Sbjct: 117 -----GTGEVQLTCQAR---------GY----------PLAEVSWQNVSVPANTSHIR-- 150
Query: 177 VSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPL 209
+ + V + ++ S + C N +
Sbjct: 151 TPEGLYQVTSVLRLKPQPSRNFSCM--FWNAHM 181
Score = 38.1 bits (88), Expect = 0.012
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
P ++ W VP + + T + S+ L+ S ++C N + +++
Sbjct: 131 PLAEVSWQNVSVPAN--TSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAI 188
Query: 67 LKIEDR 72
+ R
Sbjct: 189 IDPLSR 194
Score = 36.9 bits (85), Expect = 0.034
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 946 PSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCK 1005
P V W + + + + + + + + + S ++C N H + TS
Sbjct: 131 PLAEVSWQNVSVPAN--TSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHMKELTSAI 188
Query: 1006 LTVKGRQGIDVEPQV 1020
+ R +EP+V
Sbjct: 189 IDPLSR----MEPKV 199
Score = 34.2 bits (78), Expect = 0.25
Identities = 23/87 (26%), Positives = 33/87 (37%), Gaps = 4/87 (4%)
Query: 797 MKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
+Q +R+ +LE QLP G +F I V D GQY C ++KV+
Sbjct: 48 TSLQSERATLLEEQLPLGKALFH----IPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKA 103
Query: 857 KRSIILESQLPKGMEGTIDKIAELEGY 883
I L G + + GY
Sbjct: 104 SYMRIDTRILEVPGTGEVQLTCQARGY 130
Score = 29.6 bits (66), Expect = 6.5
Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 1346 VYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPK 1387
+ P+ + C +N H + T A I P +++ +VP+
Sbjct: 164 LKPQPSRNFSCMFWNAHMKELTSAII----DPLSRMEPKVPR 201
Score = 29.6 bits (66), Expect = 8.5
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 10/87 (11%)
Query: 603 VEWFYNGKKLPHGH------RYRTFHDF---GIVILDILYCYEENSGVYECRATNKYGSD 653
+E + R + G + I +SG Y C D
Sbjct: 34 LEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAWD 93
Query: 654 VTKASLKCVSKTNLILESQLPEGMEGG 680
++K V + + +++++ E G
Sbjct: 94 YKYLTVK-VKASYMRIDTRILEVPGTG 119
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody,
immune system; HET: NAG BMA MAN FUC; 2.20A {Homo
sapiens} PDB: 3sgk_C*
Length = 204
Score = 65.7 bits (160), Expect = 7e-12
Identities = 29/172 (16%), Positives = 48/172 (27%), Gaps = 23/172 (13%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
DS +C + + +WFHN I + I DSGEY
Sbjct: 22 KDSVTLKCQGAY-SPEDQSTQWFHNESLISSQASS----------YFIDAATVDDSGEYR 70
Query: 484 CRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFN 543
C+ P + + L + E +H C + ++ + N
Sbjct: 71 CQT-QLSTLSDPVQLEVHIGWLLLQAPRWV--FKEEDPIHLRCHSWKNTALH-KVTYLQN 126
Query: 544 GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
G+ + +DSG Y CR ++ I
Sbjct: 127 GKGRKYFHHNSD--------FYIPKATLKDSGSYFCRGLVGSKNVSSETVQI 170
Score = 60.3 bits (146), Expect = 5e-10
Identities = 29/154 (18%), Positives = 48/154 (31%), Gaps = 32/154 (20%)
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+ + ++ +N I + I ++D+G Y C+ + +
Sbjct: 36 EDQSTQWFHNESLISSQASS----------YFIDAATVDDSGEYRCQTQLSTLSDPVQLE 85
Query: 398 LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI--FHK 455
+ + Q P++ K+ D H C + N KV + NGK FH
Sbjct: 86 VH-IGWLLLQAPRWV--------FKEEDPIHLRC-HSWKNTALHKVTYLQNGKGRKYFHH 135
Query: 456 NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
N I DSG Y CR
Sbjct: 136 NSD----------FYIPKATLKDSGSYFCRGLVG 159
Score = 56.8 bits (137), Expect = 7e-09
Identities = 35/222 (15%), Positives = 55/222 (24%), Gaps = 72/222 (32%)
Query: 585 WGTAMTKAKVI--CKV----LTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEEN 638
W + K V C+ +WF+N + I ++
Sbjct: 16 WYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQAS----------SYFIDAATVDD 65
Query: 639 SGVYECRATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTET 698
SG Y C+ SD L
Sbjct: 66 SGEYRCQTQLSTLSD------------------------------------PVQL--EVH 87
Query: 699 ADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRT 758
QAP + +E + H + + KV + NGK K
Sbjct: 88 IGWLLLQAPRWVF--------KEEDPIHLRCH-SWKNTALHKVTYLQNGKGRKYFHHNSD 138
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
F I +D G Y CR V+S ++++
Sbjct: 139 F--------YIPKATLKDSGSYFCRGLVGSKN-VSSETVQIT 171
Score = 52.6 bits (126), Expect = 2e-07
Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 14/110 (12%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
L P E H C + N V + NGK
Sbjct: 89 GWLLLQAPRW-VFKEEDPIHLRCH-SWKNTALHKVTYLQNGKGRKYFHHNSD-------- 138
Query: 976 LEINDVYLRDSGLYTCKATNKHGEAT-TSCKLTVKGRQGIDVEPQVSAIF 1024
I L+DSG Y C+ + + ++T+ + +S+ F
Sbjct: 139 FYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAV---STISSFF 185
Score = 52.2 bits (125), Expect = 2e-07
Identities = 37/221 (16%), Positives = 63/221 (28%), Gaps = 57/221 (25%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P + P + V E V C+ + WF N ++ +
Sbjct: 5 LPKAVVFLE----PQWYR----VLEKDSVTLKCQGAYSPEDQ-STQWFHNESLISSQAS- 54
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATN-------------KWGTAMTKAKVI----- 595
S +D DSGEY C+ W V
Sbjct: 55 ---------SYFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDP 105
Query: 596 ----CKVL----TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT 647
C V + NGK + H F+ ++SG Y CR
Sbjct: 106 IHLRCHSWKNTALHKVTYLQNGKGRKYFHHNSDFYIPKAT--------LKDSGSYFCRGL 157
Query: 648 NKYGSDVTKASLKC-VSK--TNLILESQLPEGMEGGLEKIQ 685
+ V+ +++ +++ + S P G +G +K +
Sbjct: 158 VGSKN-VSSETVQITITQGLAVSTISSFFPPGYQGKKKKKK 197
Score = 51.4 bits (123), Expect = 4e-07
Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 50/198 (25%)
Query: 721 EGENAHF--EARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
E ++ + +P D +WF N + + + I +D G
Sbjct: 21 EKDSVTLKCQGAYSPED---QSTQWFHNESLISSQAS----------SYFIDAATVDDSG 67
Query: 779 QYSCRAYNDYGEA-----VTSASMKVQGKRSIILESQL----------PKGMEV------ 817
+Y C+ V + +Q R + E +V
Sbjct: 68 EYRCQTQLSTLSDPVQLEVHIGWLLLQAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNG 127
Query: 818 --FISFHE-----ISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ---GKRSIILESQLP 867
FH I +D G Y CR V+S ++++ G + S P
Sbjct: 128 KGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKN-VSSETVQITITQGLAVSTISSFFP 186
Query: 868 KGMEGTIDKIAELEGYGH 885
G +G K + +G+ H
Sbjct: 187 PGYQG---KKKKKKGHHH 201
Score = 49.9 bits (119), Expect = 2e-06
Identities = 34/197 (17%), Positives = 49/197 (24%), Gaps = 79/197 (40%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+ +WF N +S + + I++ DDS Y C+
Sbjct: 36 EDQSTQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQTQL---------- 75
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENV 126
S D + L V + + V KE + +
Sbjct: 76 ------------STLSDPVQLE----------------VHIGWLLLQAPRWVF-KEEDPI 106
Query: 127 HFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI--FHKNRVKMVSDFGFVV 184
H C N KV + NGK FH N
Sbjct: 107 HLRCHSWK------------------NTALHKVTYLQNGKGRKYFHHNS----------D 138
Query: 185 MDIAYVQSHDSGEYVCQ 201
I DSG Y C+
Sbjct: 139 FYIPKATLKDSGSYFCR 155
Score = 49.5 bits (118), Expect = 2e-06
Identities = 28/210 (13%), Positives = 52/210 (24%), Gaps = 66/210 (31%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
+C+ + + + +WFHN +S+ + I+ + DSG Y C+
Sbjct: 27 LKCQGAYSPEDQ-STQWFHNESLISSQASS----------YFIDAATVDDSGEYRCQTQL 75
Query: 996 KHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPV 1055
+ +L V L P
Sbjct: 76 --STLSDPVQLEV-----------------------------HIGWLLLQA----PRWVF 100
Query: 1056 FTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLD 1115
E +H C + ++ + NG+
Sbjct: 101 K-----------EEDPIHLRCHSWKNTALH-KVTYLQNGKGRKYFHHNSD--------FY 140
Query: 1116 MDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
+ +DSG Y CR ++ I
Sbjct: 141 IPKATLKDSGSYFCRGLVGSKNVSSETVQI 170
Score = 49.1 bits (117), Expect = 3e-06
Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 39/206 (18%)
Query: 1633 SEKPAKPPVFTKKIQP--CRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIH 1689
+E K V ++P R E+D + + P + +WF + I+S
Sbjct: 2 TEDLPKAVV---FLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQ------ 52
Query: 1690 TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI 1749
S + ++DSG + + + S + +E V L
Sbjct: 53 ----ASSYFIDAATVDDSGEYRCQTQL----STLSDPVQLE---------VHIGWLLLQA 95
Query: 1750 SSAVINVGQLARFDAKISATKPLDVY-WLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVE 1808
V L +L+NGK + I +A ++
Sbjct: 96 PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY--------FHHNSDFYIPKATLK 147
Query: 1809 DSGAYECVAMNNAGEAR-CEAELVVQ 1833
DSG+Y C + + ++ +
Sbjct: 148 DSGSYFCRGLVGSKNVSSETVQITIT 173
Score = 48.7 bits (116), Expect = 4e-06
Identities = 30/152 (19%), Positives = 45/152 (29%), Gaps = 30/152 (19%)
Query: 239 TEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCL 298
T+WF N + + A + I A +DSG Y + S S
Sbjct: 40 TQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQTQLSTLSDPV------- 82
Query: 299 ERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIR 358
+L V+ + L E + H V +L NGK + H
Sbjct: 83 -QLEVHIGWLLLQAPRWVFK---EEDPIHLRCH-SWKNTALHKVTYLQNGKGRKYFHHNS 137
Query: 359 TVHAFGMVVLEILGTKIEDTGVYTCRATNKWG 390
I ++D+G Y CR
Sbjct: 138 D--------FYIPKATLKDSGSYFCRGLVGSK 161
Score = 44.1 bits (104), Expect = 1e-04
Identities = 34/195 (17%), Positives = 50/195 (25%), Gaps = 47/195 (24%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V E ++V C+ S + +WFHN I
Sbjct: 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSP------------------EDQSTQWFHNESLI 49
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ-----------WFVNNKPLPAGAKFKT 217
+ I DSGEY CQ V+ L A
Sbjct: 50 SSQASS----------YFIDAATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLLQAPRWV 99
Query: 218 THDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
+ + L T + + N K F DF I A +DSG
Sbjct: 100 FKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKY---FHHNSDF-----YIPKATLKDSGS 151
Query: 278 YTVKATNSKGSATTS 292
Y + + ++
Sbjct: 152 YFCRGLVGSKNVSSE 166
Score = 43.3 bits (102), Expect = 3e-04
Identities = 17/116 (14%), Positives = 27/116 (23%), Gaps = 32/116 (27%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + W N I + I A V+DSG Y C
Sbjct: 33 YSPEDQSTQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQTQL--STLSD 80
Query: 1827 EAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+L V + + + KE + L+C
Sbjct: 81 PVQLEVHI-------------------GWLLLQAPRWV-FKEEDPIHLRCHSWKNT 116
Score = 42.9 bits (101), Expect = 3e-04
Identities = 28/183 (15%), Positives = 46/183 (25%), Gaps = 58/183 (31%)
Query: 1423 QPPRFVTQIKTQDQLV-EMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
P+ V ++ Q V E S +CQ + +WF N + + I
Sbjct: 4 DLPKAVVFLEPQWYRVLEKDSVTLKCQ-GAYSPEDQSTQWFHNESLISSQASSYFIDA-- 60
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIRE 1541
+DSGEY C+ D + L+ ++
Sbjct: 61 --------ATVDDSGEYRCQTQLSTLSDPVQ--LEVHIGWLLL----------------- 93
Query: 1542 MEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLING 1600
Q +E +P C +V +L NG
Sbjct: 94 --------------------------QAPRWVFKEEDPIHLRCHSWKNTALHKVTYLQNG 127
Query: 1601 HTI 1603
Sbjct: 128 KGR 130
Score = 40.2 bits (94), Expect = 0.002
Identities = 11/63 (17%), Positives = 17/63 (26%), Gaps = 9/63 (14%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
K+ + +NG I DS Y C+ S T
Sbjct: 117 ALHKVTYLQNGKGRKYFHHNS--------DFYIPKATLKDSGSYFCRGLVGSKNVSSE-T 167
Query: 67 LKI 69
++I
Sbjct: 168 VQI 170
Score = 40.2 bits (94), Expect = 0.003
Identities = 31/168 (18%), Positives = 45/168 (26%), Gaps = 61/168 (36%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
S ID +D GEY C+ +T+S +QL+ V
Sbjct: 55 SYFIDAATVDDSGEYRCQTQL--------STLS----DPVQLE--V-------------- 86
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
Q PR+V + E C + KV
Sbjct: 87 ----------------HIGWLLLQAPRWVFK--------EEDPIHLRCH-SWKNTALHKV 121
Query: 1460 EWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYG 1507
+ NGK + + N + +DSG Y CR
Sbjct: 122 TYLQNGKGRKYFHH-NSDF-------YIPKATLKDSGSYFCRGLVGSK 161
Score = 37.9 bits (88), Expect = 0.014
Identities = 13/63 (20%), Positives = 20/63 (31%), Gaps = 11/63 (17%)
Query: 1071 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 1130
V C+ + WF N ++ + S +D DSGEY C+
Sbjct: 24 SVTLKCQGAYSPEDQ-STQWFHNESLISSQAS----------SYFIDAATVDDSGEYRCQ 72
Query: 1131 ATN 1133
Sbjct: 73 TQL 75
Score = 36.4 bits (84), Expect = 0.052
Identities = 24/209 (11%), Positives = 57/209 (27%), Gaps = 44/209 (21%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRP-RVMWLINGHTIVNEIVRKITATET 1616
PK V +P+ +V E + C + P W N I +
Sbjct: 6 PK--AVVFLEPQWYRVLEKDSVTLKC-QGAYSPEDQSTQWFHNESLI--SSQASSYFIDA 60
Query: 1617 TEMEHKGKIQERVVDASE-KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD--------- 1666
++ G+ + + ++ P + V + QA V + D
Sbjct: 61 ATVDDSGEYRCQTQLSTLSDPVQLEVHIGWLLL-------QAPRWVFKEEDPIHLRCHSW 113
Query: 1667 ---PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR-GGKAK 1722
L + + + S + + ++DSG + +
Sbjct: 114 KNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKATLKDSGSYFCRGLVGSKNVSS 165
Query: 1723 CSANLVVEEKRQGGRGGVVPPSFLTTISS 1751
+ + + + + S +++
Sbjct: 166 ETVQITITQG--------LAVSTISSFFP 186
Score = 32.2 bits (73), Expect = 1.1
Identities = 13/61 (21%), Positives = 18/61 (29%), Gaps = 12/61 (19%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHG------------EAFTKATISCKKIPTIQLQNQVPK 1387
I +D G Y CR + +TIS P Q + + K
Sbjct: 138 DFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAVSTISSFFPPGYQGKKKKKK 197
Query: 1388 G 1388
G
Sbjct: 198 G 198
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4
complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB:
3zyo_A* 3zyn_A* 2dl9_A
Length = 452
Score = 68.6 bits (168), Expect = 8e-12
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 910 EEDLG-KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGSRIKT 967
+ AP + P DL ++E +A +CR P +V+W NG LS SR
Sbjct: 345 QASFQCSAPFIMDAPRDLNISEGRMAELKCR----TPPMSSVKWLLPNGTVLSHASRHPR 400
Query: 968 INDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
I+ L + V L D+G+YTC TN G + S L V
Sbjct: 401 ISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVST 443
Score = 54.8 bits (132), Expect = 2e-07
Identities = 21/97 (21%), Positives = 35/97 (36%), Gaps = 9/97 (9%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKII----PDIRYKTLEEDNL 1797
P + I+ G++A + V WL ++ R L +
Sbjct: 352 APFIMDAPRDLNISEGRMAELKCR--TPPMSSVKWLLPNGTVLSHASRHPRISVLNDG-- 407
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
TL ++ D+G Y C+ N AG + A L V +
Sbjct: 408 -TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVST 443
Score = 52.4 bits (126), Expect = 1e-06
Identities = 23/100 (23%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGS---RVK 1104
P L + E CR + P + W NG + S R+
Sbjct: 351 SAPFIMDAPRDLN----ISEGRMAELKCR----TPPMSSVKWLLPNGTVLSHASRHPRI- 401
Query: 1105 TVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
+V + G +L+ +V D+G Y C TN G + A +
Sbjct: 402 SVLNDG--TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYL 439
Score = 50.5 bits (121), Expect = 4e-06
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 11/90 (12%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGS---RVKTVYDFGFISL 564
+ +L++ E CR + P + W NG + S R+ +V + G +L
Sbjct: 357 DAPRDLNISEGRMAELKCR----TPPMSSVKWLLPNGTVLSHASRHPRI-SVLNDG--TL 409
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTKAKV 594
+ +V D+G Y C TN G + A +
Sbjct: 410 NFSHVLLSDTGVYTCMVTNVAGNSNASAYL 439
Score = 47.8 bits (114), Expect = 2e-05
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 26/119 (21%)
Query: 397 NLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFHK 455
+ +C P + L + G A +C P V+W NG + H
Sbjct: 347 SFQC------SAPFIMDAPRDLNISE-GRMAELKCR----TPPMSSVKWLLPNGTVLSHA 395
Query: 456 ---NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNF--------IFIPPFPIFIFHQ 503
R+ +++D G ++ ++V D+G Y C N + + H
Sbjct: 396 SRHPRISVLND-G--TLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAGTHHHHH 451
Score = 46.3 bits (110), Expect = 7e-05
Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 11/87 (12%)
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFW-NGKPMKTGS---RFRTFCDFGFVILEISPVYP 774
+ EG A + R P V+W NG + S R D G L S V
Sbjct: 364 ISEGRMAELKCRTPPMSS----VKWLLPNGTVLSHASRHPRISVLND-G--TLNFSHVLL 416
Query: 775 EDCGQYSCRAYNDYGEAVTSASMKVQG 801
D G Y+C N G + SA + V
Sbjct: 417 SDTGVYTCMVTNVAGNSNASAYLNVST 443
Score = 45.5 bits (108), Expect = 1e-04
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 4 RADPNLKIEWFK-NGVPLSLGS---RIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLG 59
R P ++W NG LS S RI D G TL+ + + D+ +YTC TN+ G
Sbjct: 375 RTPPMSSVKWLLPNGTVLSHASRHPRISVLND-G--TLNFSHVLLSDTGVYTCMVTNVAG 431
Query: 60 EAVSTCTLKI 69
+ ++ L +
Sbjct: 432 NSNASAYLNV 441
Score = 43.6 bits (103), Expect = 5e-04
Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 30/130 (23%)
Query: 1254 EIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPR-----VDPRLRVECSLSTAFFF 1308
E+++ P + + + E + R P + P V LS A
Sbjct: 342 EVDQASFQCSAPFIMDAPRDLNISEGRMAELKCRTPPMSSVKWLLPNGTV---LSHASRH 398
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
P I++ + G +L+ +V D G Y C N G +
Sbjct: 399 PRISV--------------------LNDG--TLNFSHVLLSDTGVYTCMVTNVAGNSNAS 436
Query: 1369 ATISCKKIPT 1378
A ++ T
Sbjct: 437 AYLNVSTAGT 446
Score = 42.0 bits (99), Expect = 0.002
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNP---IYD 1479
P + + + E + + +C+ P V+W L + +P + +
Sbjct: 351 SAPFIMDAPRDL-NISEGRMAELKCR----TPPMSSVKWLLPNGTVLSHASRHPRISVLN 405
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
G +NF V D+G Y C TN+ G A L +
Sbjct: 406 DGT--LNFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVSTAG 445
Score = 40.9 bits (96), Expect = 0.004
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 1639 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED-FPITSSPDFQIHTFSTKSIL 1697
P + E A + P+ ++KW + ++ + + L
Sbjct: 352 APFIMDAPRDLNISEGRMAELKCR--TPPMSSVKWLLPNGTVLSHASRHPRISVLNDGTL 409
Query: 1698 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
V + D+GV+ + N G + SA L V
Sbjct: 410 NFSHVLLSDTGVYTCMVTNVAGNSNASAYLNV 441
Score = 40.5 bits (95), Expect = 0.006
Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 347 NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG 406
NG + + R + L + DTGVYTC TN G + S L V +
Sbjct: 388 NGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTNVAGNSNASAYLN-VSTA-- 444
Query: 407 QPPKFTSH 414
H
Sbjct: 445 -GTHHHHH 451
Score = 39.3 bits (92), Expect = 0.012
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 28/105 (26%)
Query: 100 DEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKV 159
D+ +P + D+ E CR P V
Sbjct: 344 DQASFQCSAPFIMDAPRDLNISEGRMAELKCRT---------------------PPMSSV 382
Query: 160 EWFH-NGKPIFHK---NRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+W NG + H R+ +++D G ++ ++V D+G Y C
Sbjct: 383 KWLLPNGTVLSHASRHPRISVLND-G--TLNFSHVLLSDTGVYTC 424
Score = 38.2 bits (89), Expect = 0.025
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 608 NGKKLPHGH---RYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
NG L H R +D G L+ + ++GVY C TN G+ A L
Sbjct: 388 NGTVLSHASRHPRISVLND-GT--LNFSHVLLSDTGVYTCMVTNVAGNSNASAYL 439
Score = 35.9 bits (83), Expect = 0.15
Identities = 11/34 (32%), Positives = 14/34 (41%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
S V D G Y+C N G + SA + V
Sbjct: 410 NFSHVLLSDTGVYTCMVTNVAGNSNASAYLNVST 443
Score = 33.2 bits (76), Expect = 0.84
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
L+ D+G+YT TN G++ S L
Sbjct: 409 LNFSHVLLSDTGVYTCMVTNVAGNSNASAYL 439
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein;
immunoglobulin-like domain, extracellular matrix; HET:
EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Length = 98
Score = 61.4 bits (149), Expect = 2e-11
Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 8/96 (8%)
Query: 916 APEFLTT--PTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
P +T ++ F C + P+ T+ W SR N
Sbjct: 8 KPIMVTVEEQRSQSVRPGADVTFICTAK-SKSPAYTLVWTRLHNGKL-PSRAMDFNG--- 62
Query: 974 VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
IL I +V D+G Y C +N + L V+
Sbjct: 63 -ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97
Score = 59.8 bits (145), Expect = 6e-11
Identities = 22/100 (22%), Positives = 35/100 (35%), Gaps = 13/100 (13%)
Query: 1636 PAKPPVFTKKIQPCRAFEQDQARFEVEFD-----GDPLPTIKWFREDFPITSSPDFQIHT 1690
P+KP + T + Q ++ +V F P T+ W R S
Sbjct: 6 PSKPIMVTVEEQRSQSVRPGA---DVTFICTAKSKSPAYTLVWTRLHNGKLPS-----RA 57
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 1730
IL +R V D+G + N + +A L V+
Sbjct: 58 MDFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97
Score = 59.8 bits (145), Expect = 7e-11
Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 6/93 (6%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYKTLEEDNLFTL 1800
+ S + G F + P + W + +P + ++ + L
Sbjct: 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPS---RAMDFNG--IL 64
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
I D+G Y C N + A L VQ
Sbjct: 65 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97
Score = 57.1 bits (138), Expect = 6e-10
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 17/99 (17%)
Query: 1423 QPPRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWF-LNGKPLPHKNRFNP---- 1476
P VT + + Q V F C A P + W L+ LP +
Sbjct: 7 SKPIMVTVEEQRSQSVRPGADVTFICT-AKSKSPAYTLVWTRLHNGKLPSRAMDFNGILT 65
Query: 1477 IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
I + V P D+G Y+C +N++ MD+ A L
Sbjct: 66 IRN----------VQPSDAGTYVCTGSNMFAMDQGTATL 94
Score = 51.3 bits (123), Expect = 5e-08
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 8/99 (8%)
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWF-WNGKPMKTGSRFRTFCD 761
+ + TV +R G + F + P + W + + + +
Sbjct: 6 PSKPIMVTVEEQRSQSVRPGADVTFICTAK-SKSPAYTLVWTRLHNGKLPSRAMDFN--- 61
Query: 762 FGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
G IL I V P D G Y C N + +A++ VQ
Sbjct: 62 -G--ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97
Score = 50.2 bits (120), Expect = 1e-07
Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 8/94 (8%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGF 1111
P + T + Q + V V F C + K P + W + + + G
Sbjct: 9 PIMVTVEEQRSQSVRPGADVTFICTAKSK-SPAYTLVWTRLHNGKLPSRAMDFN----G- 62
Query: 1112 ISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + V D+G Y+C +N + A +
Sbjct: 63 -ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95
Score = 49.4 bits (118), Expect = 3e-07
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Query: 6 DPNLKIEWFK-NGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
P + W + + L + + L+I +++ D+ Y C +N+ T
Sbjct: 38 SPAYTLVWTRLHNGKLPSRAMDFNG------ILTIRNVQPSDAGTYVCTGSNMFAMDQGT 91
Query: 65 CTLKIE 70
TL ++
Sbjct: 92 ATLHVQ 97
Score = 45.6 bits (108), Expect = 5e-06
Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 13/101 (12%)
Query: 504 IRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWF-FNGRPFATGSRVKTVYDFGFI 562
I + Q + V V F C + K P + W + + + G
Sbjct: 10 IMVTVEEQRSQSVRPGADVTFICTAKSK-SPAYTLVWTRLHNGKLPSRAMDFN----G-- 62
Query: 563 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
L + V D+G Y+C +N + A L V V
Sbjct: 63 ILTIRNVQPSDAGTYVCTGSNMFAMDQGTA-----TLHVQV 98
Score = 45.6 bits (108), Expect = 6e-06
Identities = 13/92 (14%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 308 PLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVV 367
+ +++ Q ++ G F + T+ + S + +
Sbjct: 10 IMVTVEEQRSQSVRPGADVTFICT-AKSKSPAYTLVWTRLHNGKLPSRAMDFNG-----I 63
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L I + D G Y C +N + + + L
Sbjct: 64 LTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95
Score = 43.6 bits (103), Expect = 3e-05
Identities = 23/114 (20%), Positives = 32/114 (28%), Gaps = 24/114 (21%)
Query: 1260 IPEEPPRFITEI-ESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFL 1318
P +P E S +V+ V F + + P + + P
Sbjct: 5 APSKPIMVTVEEQRSQSVRPGADVTFICTAKSK-SPAYTLVWTRLHNGKLP--------- 54
Query: 1319 IFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATIS 1372
S + G L I V P D G YVC N AT+
Sbjct: 55 -----------SRAMDFNG--ILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLH 95
Score = 42.9 bits (101), Expect = 5e-05
Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF 466
+P T + + ++ G F CT P + W +
Sbjct: 8 KPIMVTVEEQRSQSVRPGADVTFICTAKS-KSPAYTLVWTRLHNGKLPSRAMDFNG---- 62
Query: 467 VVMDIAYVQSHDSGEYVCRAWNNF 490
++ I VQ D+G YVC N F
Sbjct: 63 -ILTIRNVQPSDAGTYVCTGSNMF 85
Score = 41.3 bits (97), Expect = 2e-04
Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 1562 APVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIV 1604
V V + +Q V+ G F CT + P ++W + +
Sbjct: 10 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKL 53
Score = 41.3 bits (97), Expect = 2e-04
Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 7/61 (11%)
Query: 236 VPFTEWF-VNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGT 294
W ++N LP+ A L I D+G Y +N + T
Sbjct: 40 AYTLVWTRLHNGKLPSRAMDFNG------ILTIRNVQPSDAGTYVCTGSNMFAMDQGTAT 93
Query: 295 L 295
L
Sbjct: 94 L 94
Score = 39.8 bits (93), Expect = 8e-04
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 823 EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I V P D G Y C N + +A++ VQ
Sbjct: 65 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97
Score = 35.6 bits (82), Expect = 0.023
Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ W + + I ++ ++G Y C +N + D A+L
Sbjct: 43 LVWTRLHNGKLPSRA--MDFNGILTIRNV---QPSDAGTYVCTGSNMFAMDQGTATL 94
Score = 32.5 bits (74), Expect = 0.27
Identities = 14/92 (15%), Positives = 23/92 (25%), Gaps = 23/92 (25%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
V + + +V F C + P + W
Sbjct: 11 MVTVEEQRSQSVRPGADVTFICTAKS------------------KSPAYTLVWTRLHNGK 52
Query: 169 FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
+ ++ I VQ D+G YVC
Sbjct: 53 LPSRAMDFNG-----ILTIRNVQPSDAGTYVC 79
Score = 31.7 bits (72), Expect = 0.52
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 1844 APGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR-ITGKPR 1883
AP A E + Q+V+ G+ VT C + P
Sbjct: 1 APLA-APSKPIMVTVEEQRSQSVRPGADVTFICTAKSKSPA 40
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG
containing, ligand binding protein,membr protein; HET:
NAG MAN; 2.70A {Homo sapiens}
Length = 477
Score = 67.8 bits (166), Expect = 2e-11
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 6/91 (6%)
Query: 921 TTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFH-NGKALSAGSRIKT-INDFGFVILEI 978
+ + E F CR DP + W +SA S + + G LE+
Sbjct: 390 RKAQQVFVDEGHTVQFVCRAD--GDPPPAILWLSPRKHLVSAKSNGRLTVFPDG--TLEV 445
Query: 979 NDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
++D+G Y C A N G + L V+
Sbjct: 446 RYAQVQDNGTYLCIAANAGGNDSMPAHLHVR 476
Score = 59.3 bits (144), Expect = 7e-09
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 1041 KDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFAT 1099
D L+P+ + + V E V F CR + DP I W +
Sbjct: 372 PDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRAD--GDPPPAILWLSPRKHLVSA 429
Query: 1100 GSRVKT-VYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
S + V+ G +L++ Y +D+G Y+C A N G A +
Sbjct: 430 KSNGRLTVFPDG--TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 57.0 bits (138), Expect = 4e-08
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 6/96 (6%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIP---DIRYKTLEEDNLF 1798
++ G +F + P + WL K ++ + R +
Sbjct: 385 ARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDG--- 441
Query: 1799 TLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQS 1834
TL + A V+D+G Y C+A N G A L V+S
Sbjct: 442 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHVRS 477
Score = 55.5 bits (134), Expect = 1e-07
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 499 FIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFF-NGRPFATGSRVKT-V 556
F + R+ + V E V F CR + DP I W + S + V
Sbjct: 380 FTCRRARIRDRKAQQVFVDEGHTVQFVCRAD--GDPPPAILWLSPRKHLVSAKSNGRLTV 437
Query: 557 YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 594
+ G +L++ Y +D+G Y+C A N G A +
Sbjct: 438 FPDG--TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 51.3 bits (123), Expect = 3e-06
Identities = 25/92 (27%), Positives = 37/92 (40%)
Query: 1638 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 1697
+ + +K Q E +F DGDP P I W + S+ T L
Sbjct: 384 RARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFPDGTL 443
Query: 1698 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 1729
+R ++D+G + IA N GG A+L V
Sbjct: 444 EVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Score = 48.9 bits (117), Expect = 1e-05
Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-NGKPIFH--KNRVKMVSD 463
+ + + +G + F C DP + W + R+ + D
Sbjct: 383 RRARIRDRKAQQVFVDEGHTVQFVCRAD--GDPPPAILWLSPRKHLVSAKSNGRLTVFPD 440
Query: 464 FGFVVMDIAYVQSHDSGEYVCRAWNNF 490
G +++ Y Q D+G Y+C A N
Sbjct: 441 -G--TLEVRYAQVQDNGTYLCIAANAG 464
Score = 48.2 bits (115), Expect = 2e-05
Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 8/96 (8%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFL-NGKPLPH--KNRFNPIYD 1479
+ R + Q + E + +F C+ GDP + W + R ++
Sbjct: 383 RRARIRDRKAQQVFVDEGHTVQFVCRA--DGDPPPAILWLSPRKHLVSAKSNGRLT-VFP 439
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAIL 1515
G + + +D+G YLC A N G D A L
Sbjct: 440 DGTL--EVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 45.9 bits (109), Expect = 1e-04
Identities = 29/130 (22%), Positives = 44/130 (33%), Gaps = 16/130 (12%)
Query: 674 PEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDLREGENAHFEARLTP 733
PE ++G + +D + R+A + + + EG F R
Sbjct: 360 PEFVQG-----KEFKDFPDVLLPN--YFTCRRARIRDRKAQQVF-VDEGHTVQFVCRAD- 410
Query: 734 TDDPKLKVEWFW-NGK--PMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGE 790
DP + W K+ R F D G LE+ +D G Y C A N G
Sbjct: 411 -GDPPPAILWLSPRKHLVSAKSNGRLTVFPD-G--TLEVRYAQVQDNGTYLCIAANAGGN 466
Query: 791 AVTSASMKVQ 800
A + V+
Sbjct: 467 DSMPAHLHVR 476
Score = 42.8 bits (101), Expect = 0.001
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 5 ADPNLKIEWFK-NGVPLSLGSRIRST-FDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
DP I W +S S R T F G TL + + D+ Y C A N G
Sbjct: 411 GDPPPAILWLSPRKHLVSAKSNGRLTVFPDG--TLEVRYAQVQDNGTYLCIAANAGGNDS 468
Query: 63 STCTLKI 69
L +
Sbjct: 469 MPAHLHV 475
Score = 42.4 bits (100), Expect = 0.001
Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 10/95 (10%)
Query: 308 PLFSLQFQHLSNLSEGEIAHF--EASLIPVGDQTMTVEFLY-NGKPIEASHRIRT-VHAF 363
+ + EG F A GD + +L + A R V
Sbjct: 385 ARIRDRKAQQVFVDEGHTVQFVCRAD----GDPPPAILWLSPRKHLVSAKSNGRLTVFPD 440
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
G LE+ +++D G Y C A N G + +L
Sbjct: 441 GT--LEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 38.2 bits (89), Expect = 0.028
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Query: 608 NGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ R F D G L++ Y +++G Y C A N G+D A L
Sbjct: 423 RKHLVSAKSNGRLTVFPD-GT--LEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 38.2 bits (89), Expect = 0.029
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
+L++ Y +D G Y+C A N G A +
Sbjct: 442 TLEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 37.8 bits (88), Expect = 0.038
Identities = 21/130 (16%), Positives = 36/130 (27%), Gaps = 36/130 (27%)
Query: 74 WLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVE 133
++ K + D+ P + V E V F CR +
Sbjct: 362 FVQGKEFKD-----FPDVLLPNYFTCRRARIRDRKA------QQVFVDEGHTVQFVCRAD 410
Query: 134 PSKDATMKIGKLLCTLTPVNDPELKVEWFH-NGKPIFH--KNRVKMVSDFGFVVMDIAYV 190
DP + W + R+ + D G +++ Y
Sbjct: 411 -------------------GDPPPAILWLSPRKHLVSAKSNGRLTVFPD-G--TLEVRYA 448
Query: 191 QSHDSGEYVC 200
Q D+G Y+C
Sbjct: 449 QVQDNGTYLC 458
Score = 36.2 bits (84), Expect = 0.11
Identities = 21/121 (17%), Positives = 32/121 (26%), Gaps = 21/121 (17%)
Query: 747 GKPMKTGSRFRTFCDFGFVILEISPVYPEDCG-------QYSCRAYNDYGEAVTSASMKV 799
GK K F I + Q+ CRA G+ +
Sbjct: 365 GKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRAD---GDPPPAILWLS 421
Query: 800 QGKRSIILESQLPKGMEVFISFH-----EISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 854
K + ++ E+ +D G Y C A N G A + V
Sbjct: 422 PRKHLV------SAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGGNDSMPAHLHV 475
Query: 855 Q 855
+
Sbjct: 476 R 476
Score = 35.5 bits (82), Expect = 0.16
Identities = 13/60 (21%), Positives = 22/60 (36%)
Query: 1546 WQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVN 1605
L + A + + + V EG +F R G P P ++WL +V+
Sbjct: 369 KDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVS 428
Score = 33.2 bits (76), Expect = 0.93
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
L++ A +D+G Y A N+ G+ + L
Sbjct: 443 LEVRYAQVQDNGTYLCIAANAGGNDSMPAHL 473
Score = 30.1 bits (68), Expect = 9.3
Identities = 9/31 (29%), Positives = 10/31 (32%)
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
A + V EG V CR G P
Sbjct: 383 RRARIRDRKAQQVFVDEGHTVQFVCRADGDP 413
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3;
structural genomics, joint center for struct genomics,
JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Length = 112
Score = 61.6 bits (149), Expect = 2e-11
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 9/101 (8%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGS---RIKTINDFGF 973
P+ P + + F C ++D MT W + +AL G
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 974 V-----ILEINDVYLRDSGLYTCKATNKHGEATTSC-KLTV 1008
+ IL + +V G Y C +N G + + LT+
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 48.5 bits (115), Expect = 8e-07
Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 9/90 (10%)
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFH---KNRVKMVSDFG 465
P+ T ++ + G F C+ +D + W + + + +N + + G
Sbjct: 11 PQITVQPETQSAIX-GSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGG 69
Query: 466 FVVMD-----IAYVQSHDSGEYVCRAWNNF 490
++ + V+ G Y C N+F
Sbjct: 70 ELMEYTTILRLRNVEFTSEGXYQCVISNHF 99
Score = 47.4 bits (112), Expect = 2e-06
Identities = 17/102 (16%), Positives = 31/102 (30%), Gaps = 10/102 (9%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS---RFRTFCDFG 763
P TV G + F + D + W + + ++ G
Sbjct: 11 PQITVQPETQS-AIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGG 69
Query: 764 FV-----ILEISPVYPEDCGQYSCRAYNDYGEAVTS-ASMKV 799
+ IL + V G Y C N +G + + A + +
Sbjct: 70 ELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 47.0 bits (111), Expect = 3e-06
Identities = 15/101 (14%), Positives = 28/101 (27%), Gaps = 11/101 (10%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQIHTFSTK--- 1694
P T + + A F T W ++ + + +
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 1695 -----SILIMRQVFMEDSGVFAVIAENRGGKAKCS-ANLVV 1729
+IL +R V G + + N G + A L +
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 46.2 bits (109), Expect = 6e-06
Identities = 20/101 (19%), Positives = 30/101 (29%), Gaps = 12/101 (11%)
Query: 1425 PRFVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPH---KNRFNPIYDF 1480
P+ Q + Q F C A D M W + + L +N +
Sbjct: 11 PQITVQP--ETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQG 68
Query: 1481 GYVAMNFGW-----VYPEDSGEYLCRATNLYGMDETR-AIL 1515
G + V G Y C +N +G + A L
Sbjct: 69 GELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXL 109
Score = 45.8 bits (108), Expect = 8e-06
Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 11/101 (10%)
Query: 1743 PSFLTTISSAVINVGQLARFD--AKISATKPLDVYWLKNGKKIIPD-------IRYKTLE 1793
P + G F A S+ P+ W + + + +R + E
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGE 70
Query: 1794 EDNLFTLLIIEAV-VEDSGAYECVAMNNAGEARCE-AELVV 1832
T+L + V G Y+CV N+ G + A L +
Sbjct: 71 LMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSVXAXLTI 111
Score = 44.7 bits (105), Expect = 2e-05
Identities = 8/43 (18%), Positives = 10/43 (23%), Gaps = 2/43 (4%)
Query: 1563 PVFVSQPEAQKVQEGEPARFCTRVTGYPRP--RVMWLINGHTI 1603
P QPE Q G F W + +
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEAL 53
Score = 43.1 bits (101), Expect = 6e-05
Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 9/96 (9%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGS---RVKTVYDFG 1110
P T Q + V F C SD M W + G
Sbjct: 11 PQITVQPE-TQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGG 69
Query: 1111 FI-----SLDMDYVYARDSGEYICRATNKWGTAMTK 1141
+ L + V G Y C +N +G++ +
Sbjct: 70 ELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 42.4 bits (99), Expect = 1e-04
Identities = 10/72 (13%), Positives = 21/72 (29%), Gaps = 8/72 (11%)
Query: 1 VEPRADPNLKIEWFKNGVPL---SLGSRIRSTFDFGLV-----TLSINSLRADDSAIYTC 52
+D + W + L + + G + L + ++ Y C
Sbjct: 34 AASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQC 93
Query: 53 KATNLLGEAVST 64
+N G + S
Sbjct: 94 VISNHFGSSYSV 105
Score = 41.6 bits (97), Expect = 2e-04
Identities = 18/105 (17%), Positives = 26/105 (24%), Gaps = 16/105 (15%)
Query: 495 PFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGS--- 551
P P P V F C SD M W +
Sbjct: 9 PXPQITVQ------PE--TQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMEN 60
Query: 552 RVKTVYDFGFI-----SLDMDYVYARDSGEYICRATNKWGTAMTK 591
G + L + V G Y C +N +G++ +
Sbjct: 61 YAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 40.4 bits (94), Expect = 5e-04
Identities = 14/105 (13%), Positives = 27/105 (25%), Gaps = 25/105 (23%)
Query: 105 VFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHN 164
F P +V F C S +D + W +
Sbjct: 7 DFPXPQITVQPETQSAIXGSDVSFTCSAASS-----------------SDSPMTFAWXXD 49
Query: 165 GKPIFH---KNRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCQ 201
+ + +N + + G ++ + V+ G Y C
Sbjct: 50 NEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCV 94
Score = 39.3 bits (91), Expect = 0.001
Identities = 16/116 (13%), Positives = 31/116 (26%), Gaps = 21/116 (18%)
Query: 1258 DEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVE-----CSLSTAFFFPFIN 1312
D+ P P+ + E+ + V F D + +L A + +
Sbjct: 6 DDFPX--PQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAH 63
Query: 1313 ISTAFLIFNFCLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTK 1368
+ L + V +G Y C N G +++
Sbjct: 64 LRA--------------QGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYSV 105
Score = 33.9 bits (77), Expect = 0.10
Identities = 6/29 (20%), Positives = 10/29 (34%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPR 1883
P + + Q+ GS V+ C
Sbjct: 11 PQITVQPETQSAIXGSDVSFTCSAASSSD 39
Score = 33.9 bits (77), Expect = 0.11
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 13/88 (14%)
Query: 323 GEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHA--------FGMVVLEILGTK 374
G F S D MT + + + ++ + H +L + +
Sbjct: 25 GSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVE 84
Query: 375 IEDTGVYTCRATNKWGQ-----AEISVN 397
G Y C +N +G A +++N
Sbjct: 85 FTSEGXYQCVISNHFGSSYSVXAXLTIN 112
Score = 32.0 bits (72), Expect = 0.51
Identities = 10/61 (16%), Positives = 16/61 (26%), Gaps = 8/61 (13%)
Query: 240 EWFVNNKPLPAGAKFKTTH--------DFGYVALDIVGAYAEDSGIYTVKATNSKGSATT 291
W +N+ L H L + G Y +N GS+ +
Sbjct: 45 AWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSYS 104
Query: 292 S 292
Sbjct: 105 V 105
Score = 30.0 bits (67), Expect = 2.3
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 9/66 (13%)
Query: 603 VEWFYNGKKLPHGHRYRTFH--------DFGIVILDILYCYEENSGVYECRATNKYGSDV 654
W + + L H IL + + G Y+C +N +GS
Sbjct: 44 FAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTSEGXYQCVISNHFGSSY 103
Query: 655 TK-ASL 659
+ A L
Sbjct: 104 SVXAXL 109
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI,
thick filament, immunoglobulin domain; NMR {Homo sapiens}
SCOP: b.1.1.4
Length = 139
Score = 60.1 bits (145), Expect = 2e-10
Identities = 16/121 (13%), Positives = 28/121 (23%), Gaps = 31/121 (25%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKA------------------ 958
P + + + ++ DP+ TV W
Sbjct: 19 DCPGRIPDTIVVVAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGD 76
Query: 959 -----------LSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLT 1007
R++ I + D G+YT N GE + +
Sbjct: 77 SDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVK 136
Query: 1008 V 1008
V
Sbjct: 137 V 137
Score = 58.2 bits (140), Expect = 6e-10
Identities = 31/185 (16%), Positives = 49/185 (26%), Gaps = 53/185 (28%)
Query: 1548 HTPEQLVEDEKPK-EAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
H+ Q E PK P+ V G R ++G P P V+W
Sbjct: 7 HSSRQ----EPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIW---------- 52
Query: 1607 IVRKITATETTEMEHKGKIQERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD 1666
+K A E E FD
Sbjct: 53 ---------------------------QKAITQGNKAPARPAPDAPEDTGDSDEWVFDKK 85
Query: 1667 PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 1726
+ ++ T +SI + ED GV+ V +N G+ + +
Sbjct: 86 -----------LLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLT 134
Query: 1727 LVVEE 1731
+ V +
Sbjct: 135 VKVID 139
Score = 55.5 bits (133), Expect = 5e-09
Identities = 19/109 (17%), Positives = 27/109 (24%), Gaps = 29/109 (26%)
Query: 1753 VINVGQLARFDAKISATKPLDVYWLKNGKKIIP--------------------------- 1785
V+ G R D IS V W K +
Sbjct: 29 VVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC 88
Query: 1786 --DIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVV 1832
+ R + + + A ED G Y N GE + + V
Sbjct: 89 ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137
Score = 51.7 bits (123), Expect = 1e-07
Identities = 13/69 (18%), Positives = 23/69 (33%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
P + F + R+R ++ +D +YT N +GE
Sbjct: 71 PEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQ 130
Query: 63 STCTLKIED 71
T+K+ D
Sbjct: 131 VNLTVKVID 139
Score = 49.4 bits (117), Expect = 7e-07
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 350 PIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 402
E R+R + + G + ED GVYT N G+ ++++ ++ +D
Sbjct: 87 LCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVID 139
Score = 47.4 bits (112), Expect = 4e-06
Identities = 18/109 (16%), Positives = 26/109 (23%), Gaps = 31/109 (28%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMK---------------------------- 751
G + ++ DP V W
Sbjct: 31 VAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLC 88
Query: 752 -TGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKV 799
T R R I + ED G Y+ N GE + ++KV
Sbjct: 89 ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKV 137
Score = 44.0 bits (103), Expect = 6e-05
Identities = 18/130 (13%), Positives = 28/130 (21%), Gaps = 35/130 (26%)
Query: 1049 EKPNPPVF----TSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF------- 1097
+ PP ++ D + V K+ D + DP + W
Sbjct: 9 SRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPI--SGDPAPTVIWQKAITQGNKAPARP 66
Query: 1098 ----------------------ATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKW 1135
T RV+ ++ D G Y N
Sbjct: 67 APDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPV 126
Query: 1136 GTAMTKAKVI 1145
G V
Sbjct: 127 GEDQVNLTVK 136
Score = 42.8 bits (100), Expect = 1e-04
Identities = 16/83 (19%), Positives = 24/83 (28%)
Query: 214 KFKTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAE 273
K T + + T F + + + GA E
Sbjct: 54 KAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKE 113
Query: 274 DSGIYTVKATNSKGSATTSGTLK 296
D G+YTV N G + T+K
Sbjct: 114 DEGVYTVTVKNPVGEDQVNLTVK 136
Score = 42.8 bits (100), Expect = 2e-04
Identities = 17/130 (13%), Positives = 30/130 (23%), Gaps = 35/130 (26%)
Query: 1420 EKKQPPRFVTQIKTQ---DQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFN 1475
+++PP+ + +V + + ++ GDP V W
Sbjct: 9 SRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPARP 66
Query: 1476 PIYDFGYVAMNFGW-----------------------------VYPEDSGEYLCRATNLY 1506
+ W ED G Y N
Sbjct: 67 APDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPV 126
Query: 1507 GMDETRAILK 1516
G D+ +K
Sbjct: 127 GEDQVNLTVK 136
Score = 42.4 bits (99), Expect = 2e-04
Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 15/126 (11%)
Query: 1262 EEPPRFITEI-----ESVTVQEAEPVRFETRVE----PRVD-PRLRVECSLSTAFFFPFI 1311
+EPP+ + +++ V +R + + P V + + + + A P
Sbjct: 11 QEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDA 70
Query: 1312 NISTAFLIFNFCLHAVIFS-----HPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAF 1366
T ++ ++ ED+G Y N GE
Sbjct: 71 PEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQ 130
Query: 1367 TKATIS 1372
T+
Sbjct: 131 VNLTVK 136
Score = 41.7 bits (97), Expect = 3e-04
Identities = 19/124 (15%), Positives = 28/124 (22%), Gaps = 33/124 (26%)
Query: 503 QIRLPSPSQ--DNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPF------------- 547
+I L P + D + V K+ D + DP + W
Sbjct: 15 KIHLDCPGRIPDTIVVVAGNKLRLDVPI--SGDPAPTVIWQKAITQGNKAPARPAPDAPE 72
Query: 548 ----------------ATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
T RV+ ++ D G Y N G
Sbjct: 73 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 132
Query: 592 AKVI 595
V
Sbjct: 133 LTVK 136
Score = 39.7 bits (92), Expect = 0.002
Identities = 15/119 (12%), Positives = 28/119 (23%), Gaps = 35/119 (29%)
Query: 403 KSKGQPPKFTSHIKSLEG----LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN-- 456
S+ +PPK + G+ + ++ DP V W
Sbjct: 8 SSRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPIS--GDPAPTVIWQKAITQGNKAPAR 65
Query: 457 ---------------------------RVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
RV++ + + + + D G Y N
Sbjct: 66 PAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKN 124
Score = 38.6 bits (89), Expect = 0.005
Identities = 15/113 (13%), Positives = 32/113 (28%), Gaps = 12/113 (10%)
Query: 98 RKDEPELVFDSPVFISHLNDVECKENENVHFDCRVE----PS-----KDATMKIGKLLCT 148
R++ P++ D P + + + D + P+
Sbjct: 10 RQEPPKIHLDCPG--RIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPA 67
Query: 149 LTPVNDPELKVEWFHNGKPIFHKN-RVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
D EW + K + RV++ + + + + D G Y
Sbjct: 68 PDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTV 120
Score = 34.3 bits (78), Expect = 0.12
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 5/40 (12%)
Query: 1848 AVAQDEAPTV-----AEPLKDQNVKEGSAVTLKCRITGKP 1882
++ E P + V G+ + L I+G P
Sbjct: 7 HSSRQEPPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDP 46
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system;
3.00A {Homo sapiens}
Length = 193
Score = 61.2 bits (148), Expect = 2e-10
Identities = 25/196 (12%), Positives = 56/196 (28%), Gaps = 37/196 (18%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI------------------FHKNRVKMVSDFG 465
G+S + W N + R+ +
Sbjct: 13 GESVTLPLEFPAGEKVN-FITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYS 71
Query: 466 FVVMDIAYVQSHDSGEYVCRAWN-NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAG-KVH 523
++ ++ D+G Y + + + + I Q+R + + ++H
Sbjct: 72 LQ---LSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELH 128
Query: 524 FDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN 583
C +E +D + W G ++ + +S D +Y C A N
Sbjct: 129 LTCSVE-DADDNVSFRWEALGNTLSSQPNLT-------VSWDPR---ISSEQDYTCIAEN 177
Query: 584 K--WGTAMTKAKVICK 597
+ A+ +C+
Sbjct: 178 AVSNLSFSVSAQKLCE 193
Score = 58.8 bits (142), Expect = 1e-09
Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 15/121 (12%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L++ K+EDTG Y + + K S L + Q S
Sbjct: 72 LQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILR----QLRNIQVTNHSQLFQNMTCEL 127
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAW 487
H C++ D + W G + + + + D + +Y C A
Sbjct: 128 HLTCSVED-ADDNVSFRWEALGNTLSSQPNLTVSWD----------PRISSEQDYTCIAE 176
Query: 488 N 488
N
Sbjct: 177 N 177
Score = 53.1 bits (127), Expect = 1e-07
Identities = 29/243 (11%), Positives = 57/243 (23%), Gaps = 70/243 (28%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL-------SAGSRIKTINDFGFV 974
TP + + W N +L + I N
Sbjct: 4 TPLMVNGILGESVTLPLEFPAGEKV-NFITWLFNETSLAFIVPHETKSPEIHVTNPKQGK 62
Query: 975 I--------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFAN 1026
L+++++ + D+G Y + + K +S L
Sbjct: 63 RLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLR------------------- 103
Query: 1027 ATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTM 1086
L ++H C +E +D +
Sbjct: 104 ----------------------ILRQLRNIQVTNHSQLFQNMTCELHLTCSVE-DADDNV 140
Query: 1087 RIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNK--WGTAMTKAKV 1144
W G ++ + +S D +Y C A N + A+
Sbjct: 141 SFRWEALGNTLSSQPNLT-------VSWDPR---ISSEQDYTCIAENAVSNLSFSVSAQK 190
Query: 1145 ICK 1147
+C+
Sbjct: 191 LCE 193
Score = 51.5 bits (123), Expect = 3e-07
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 17/134 (12%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L + ED+G Y + + + +S TL+ L +L + +
Sbjct: 72 LQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQL------RNIQVTNHSQLFQNMTC 125
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR 384
H S + D ++ + G + + + +I YTC
Sbjct: 126 ELHLTCS-VEDADDNVSFRWEALGNTLSSQPNLTV----------SWDPRISSEQDYTCI 174
Query: 385 ATNKWGQAEISVNL 398
A N SV+
Sbjct: 175 AENAVSNLSFSVSA 188
Score = 44.2 bits (104), Expect = 1e-04
Identities = 28/177 (15%), Positives = 42/177 (23%), Gaps = 57/177 (32%)
Query: 522 VHFDCRLEPKSDPTMRIDWFFNGRPFAT------GSRVKTVYDFGFI---------SLDM 566
V P + I W FN A S V + SL +
Sbjct: 16 VTLPLEF-PAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQL 74
Query: 567 DYVYARDSGEYICRATNKWGTAMTKAKVI---------------------CKV-LTVIVE 604
+ D+G Y + + K ++ + C++ LT VE
Sbjct: 75 SNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTCSVE 134
Query: 605 ---------WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGS 652
W G L D + Y C A N +
Sbjct: 135 DADDNVSFRWEALGNTLSSQPNLTVSWDPR----------ISSEQDYTCIAENAVSN 181
Score = 38.4 bits (89), Expect = 0.009
Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 10/66 (15%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
AD N+ W G LS +T+S R YTC A N +
Sbjct: 134 EDADDNVSFRWEALGNTLSSQPN---------LTVS-WDPRISSEQDYTCIAENAVSNLS 183
Query: 63 STCTLK 68
+ + +
Sbjct: 184 FSVSAQ 189
Score = 36.9 bits (85), Expect = 0.028
Identities = 26/195 (13%), Positives = 53/195 (27%), Gaps = 35/195 (17%)
Query: 1647 QPCRAFEQDQARFEVEFD-GDPLPTIKWFRED---------------FPITSSPDFQIHT 1690
+ +EF G+ + I W + +T+ +
Sbjct: 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLN 65
Query: 1691 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
F+ L + + MED+G + + S L + + + +T S
Sbjct: 66 FTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQ--------LRNIQVTNHS 117
Query: 1751 SAVINVGQLARFDAKI-SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVED 1809
N+ + A + W G + + NL + + +
Sbjct: 118 QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTL--------SSQPNL--TVSWDPRISS 167
Query: 1810 SGAYECVAMNNAGEA 1824
Y C+A N
Sbjct: 168 EQDYTCIAENAVSNL 182
Score = 36.5 bits (84), Expect = 0.037
Identities = 19/152 (12%), Positives = 41/152 (26%), Gaps = 37/152 (24%)
Query: 1749 ISSAVINV----GQLARFDAKISATKPLD-VYWLKNGKKIIPDIRYKT------------ 1791
+S + V G+ + A + ++ + WL N + + ++T
Sbjct: 1 MSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQ 60
Query: 1792 ---LEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAA 1848
L ++L + +ED+G+Y L +
Sbjct: 61 GKRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRI---------------- 104
Query: 1849 VAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ Q V + L C +
Sbjct: 105 LRQLRNIQV-TNHSQLFQNMTCELHLTCSVED 135
Score = 35.7 bits (82), Expect = 0.075
Identities = 19/190 (10%), Positives = 42/190 (22%), Gaps = 52/190 (27%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPI------------------FHKNRVKMVSDFGFVVMD 186
L + W N + R+ +
Sbjct: 18 LPLEFPAGEKVN-FITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQ--- 73
Query: 187 IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTE------ 240
++ ++ D+G Y Q ++ K + + + + + T
Sbjct: 74 LSNLKMEDTGSYRAQ--ISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLTC 131
Query: 241 ------------WFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGS 288
W L + + D YT A N+ +
Sbjct: 132 SVEDADDNVSFRWEALGNTLSSQPNLTVSWDPR----------ISSEQDYTCIAENAVSN 181
Query: 289 ATTSGTLKCL 298
+ S + + L
Sbjct: 182 LSFSVSAQKL 191
Score = 34.6 bits (79), Expect = 0.18
Identities = 22/180 (12%), Positives = 43/180 (23%), Gaps = 47/180 (26%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGK------PMKTGSRFRTFCDFGFVI-------- 766
GE+ + + W +N P +T S +
Sbjct: 12 LGESVTLPLEFPAGEKVN-FITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSY 70
Query: 767 -LEISPVYPEDCGQYSCRAYNDYGEAVT-----------------SASMKVQGKRSIILE 808
L++S + ED G Y + ++ + + + L
Sbjct: 71 SLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLFQNMTCELHLT 130
Query: 809 SQLPKGME-VFISFHE------------ISPVYP-EDCGQYSCRAYNDYGEAVTSASMKV 854
+ + V + +S Y+C A N S S +
Sbjct: 131 CSVEDADDNVSFRWEALGNTLSSQPNLTVSWDPRISSEQDYTCIAENAVSNLSFSVSAQK 190
Score = 34.2 bits (78), Expect = 0.24
Identities = 23/168 (13%), Positives = 40/168 (23%), Gaps = 64/168 (38%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGE---AFTKATISCKKIPTIQLQNQVPKGMLKTEALI 1396
SL + + ED G Y + ++T + + + +Q+
Sbjct: 71 SLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQLF---------- 120
Query: 1397 QMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPN 1456
+ T E++LT C D N
Sbjct: 121 ------QNMTCELHLT----------------------------------CS-VEDADDN 139
Query: 1457 MKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATN 1504
+ W G L + +D +Y C A N
Sbjct: 140 VSFRWEALGNTLSSQPNLTVSWD----------PRISSEQDYTCIAEN 177
Score = 33.4 bits (76), Expect = 0.47
Identities = 21/171 (12%), Positives = 43/171 (25%), Gaps = 64/171 (37%)
Query: 36 TLSINSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPK 95
+L +++L+ +D+ Y + + +S+ TL+I + L +
Sbjct: 71 SLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRI------------------LRQLRNIQ 112
Query: 96 EVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDP 155
V +H C VE D
Sbjct: 113 --------------VTNHSQLFQN--MTCELHLTCSVED------------------ADD 138
Query: 156 ELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNN 206
+ W G + + + + D + +Y C N
Sbjct: 139 NVSFRWEALGNTLSSQPNLTVSWD----------PRISSEQDYTCI--AEN 177
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast
MYBP-C, C-protein, skeletal muscle fast isoform,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 118
Score = 58.7 bits (141), Expect = 2e-10
Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 1742 PPSFLTTISSAVINVGQLARFDAKISATKPL---DVYWLK---------NGKKIIPDIRY 1789
FL S + G+ A AK++ + + W K +G + +
Sbjct: 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESH 71
Query: 1790 KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
+ L I + V+ D G Y C + V++ +
Sbjct: 72 NSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAPR 118
Score = 54.4 bits (130), Expect = 9e-09
Identities = 25/114 (21%), Positives = 39/114 (34%), Gaps = 12/114 (10%)
Query: 1632 ASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFR---EDFPITSSPD 1685
+S VF KK A + +G L PTIKWF+ + S
Sbjct: 5 SSGAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGAR 64
Query: 1686 FQIHTFSTKSI------LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKR 1733
F + L + +V + D G + + + + C N+ VE R
Sbjct: 65 FSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAPR 118
Score = 51.0 bits (121), Expect = 1e-07
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 12/107 (11%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDP-SMTVEWFHNGK----ALSAGSRIK--- 966
FL P +++ A ++ P T++WF GK +G+R
Sbjct: 11 PTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWF-KGKWLELGSKSGARFSFKE 69
Query: 967 TINDFGFVI---LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
+ N V L I V L D G Y + K + + V+
Sbjct: 70 SHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEA 116
Score = 48.6 bits (115), Expect = 9e-07
Identities = 23/107 (21%), Positives = 40/107 (37%), Gaps = 11/107 (10%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDP-KLKVEWF---WNGKPMKTGSRFR----- 757
VF ++ + G++A A++ + P K ++WF W K+G+RF
Sbjct: 13 GVFLKKPDSVS-VETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESH 71
Query: 758 -TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR 803
+ + V L I V D G Y ++ V+ R
Sbjct: 72 NSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAPR 118
Score = 37.1 bits (85), Expect = 0.009
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 16/85 (18%)
Query: 1549 TPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYP---RPRVMWL-------- 1597
+ +E VF+ +P++ V+ G+ A +V G +P + W
Sbjct: 2 SSGSSGAEEPT---GVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELG 58
Query: 1598 --INGHTIVNEIVRKITATETTEME 1620
E + T E+
Sbjct: 59 SKSGARFSFKESHNSASNVYTVELH 83
Score = 35.9 bits (82), Expect = 0.024
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 12/110 (10%)
Query: 1418 EPEKKQPP-RFVTQIKTQDQLVEMQSTKFECQLAPVGDPN-MKVEWF---------LNGK 1466
++P F+ + + + + ++ P+ ++WF +G
Sbjct: 5 SSGAEEPTGVFLKKPDSV-SVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGA 63
Query: 1467 PLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
K N + V ++ G V D G Y D +
Sbjct: 64 RFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNID 113
Score = 35.6 bits (81), Expect = 0.035
Identities = 8/54 (14%), Positives = 13/54 (24%)
Query: 805 IILESQLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR 858
+ V+ I V D G Y ++ V+ R
Sbjct: 65 FSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAPR 118
Score = 35.6 bits (81), Expect = 0.035
Identities = 18/109 (16%), Positives = 32/109 (29%), Gaps = 27/109 (24%)
Query: 108 SPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWF----- 162
+ VF+ + V + ++ +V + P ++WF
Sbjct: 12 TGVFLKKPDSVSVETGKDAVVVAKVNGK--------------ELPDKPT--IKWFKGKWL 55
Query: 163 ----HNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNK 207
+G K S+ V + I V D G Y + V K
Sbjct: 56 ELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLE--VKAK 102
Score = 34.4 bits (78), Expect = 0.092
Identities = 7/32 (21%), Positives = 10/32 (31%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
L I + D G Y K N++
Sbjct: 82 LHIGKVVLGDRGYYRLEVKAKDTCDSCGFNID 113
Score = 34.0 bits (77), Expect = 0.11
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 9/70 (12%)
Query: 10 KIEWFK---------NGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
I+WFK +G S S + V L I + D Y +
Sbjct: 46 TIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTC 105
Query: 61 AVSTCTLKIE 70
+ +E
Sbjct: 106 DSCGFNIDVE 115
Score = 31.3 bits (70), Expect = 1.0
Identities = 18/102 (17%), Positives = 29/102 (28%), Gaps = 13/102 (12%)
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDP-TMRIDWFFNGRPFATGS--- 1101
+ VF + ++ V ++ K P I WF G+ GS
Sbjct: 5 SSGAEEPTGVFLKKPD-SVSVETGKDAVVVAKVNGKELPDKPTIKWF-KGKWLELGSKSG 62
Query: 1102 ---RVKTVYDFG----FISLDMDYVYARDSGEYICRATNKWG 1136
K ++ + L + V D G Y K
Sbjct: 63 ARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDT 104
Score = 31.3 bits (70), Expect = 1.1
Identities = 6/39 (15%), Positives = 17/39 (43%)
Query: 1844 APGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ G++ A++ + +V+ G + ++ GK
Sbjct: 2 SSGSSGAEEPTGVFLKKPDSVSVETGKDAVVVAKVNGKE 40
Score = 30.5 bits (68), Expect = 1.8
Identities = 16/94 (17%), Positives = 26/94 (27%), Gaps = 15/94 (15%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLT---PVNDPELKVEWF---------HNGKPIFHK 455
F S+ ++ G A + + P ++WF +G K
Sbjct: 12 TGVFLKKPDSVS-VETGKDAVVVAKVNGKELPDKPT--IKWFKGKWLELGSKSGARFSFK 68
Query: 456 NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
S+ V + I V D G Y
Sbjct: 69 ESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAK 102
Score = 29.4 bits (65), Expect = 4.4
Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 9/67 (13%)
Query: 603 VEWF---------YNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
++WF +G + + + + V L I + G Y K D
Sbjct: 47 IKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGDRGYYRLEVKAKDTCD 106
Query: 654 VTKASLK 660
++
Sbjct: 107 SCGFNID 113
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 112
Score = 56.9 bits (137), Expect = 9e-10
Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 15/114 (13%)
Query: 1735 GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPD-------- 1786
G G + + + G+ A F +S W NG+++ +
Sbjct: 1 GSSGSSGTARLVAGLEDVQVYDGEDAVFSLDLSTIIQ--GTWFLNGEELKSNEPEGQVEP 58
Query: 1787 --IRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
+RY+ ++ L++ +DSGA + + A L +Q P
Sbjct: 59 GALRYRIEQKGLQHRLILHAVKHQDSGALVGFS---CPGVQDSAALTIQESSGP 109
Score = 51.1 bits (122), Expect = 1e-07
Identities = 18/111 (16%), Positives = 32/111 (28%), Gaps = 17/111 (15%)
Query: 913 LGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFG 972
+ D+ + + A F L+ + WF NG+ L + +
Sbjct: 5 SSGTARLVAGLEDVQVYDGEDAVFSLDLSTI----IQGTWFLNGEELKSNEPEGQVEPGA 60
Query: 973 FVI----------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQG 1013
L ++ V +DSG S LT++ G
Sbjct: 61 LRYRIEQKGLQHRLILHAVKHQDSGALV---GFSCPGVQDSAALTIQESSG 108
Score = 49.6 bits (118), Expect = 4e-07
Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 1638 KPPV-FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS----------PDF 1686
++ + ++ + A F ++ WF + S+ +
Sbjct: 6 SGTARLVAGLEDVQVYDGEDAVFSLDLSTI--IQGTWFLNGEELKSNEPEGQVEPGALRY 63
Query: 1687 QIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 1732
+I + LI+ V +DSG + + SA L ++E
Sbjct: 64 RIEQKGLQHRLILHAVKHQDSGALVGFS---CPGVQDSAALTIQES 106
Score = 46.1 bits (109), Expect = 6e-06
Identities = 20/104 (19%), Positives = 38/104 (36%), Gaps = 18/104 (17%)
Query: 709 FTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKT----------GSRFRT 758
L ++ + +GE+A F L+ ++ WF NG+ +K+ R+R
Sbjct: 11 LVAGLEDVQ-VYDGEDAVFSLDLST----IIQGTWFLNGEELKSNEPEGQVEPGALRYRI 65
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGK 802
L + V +D G + SA++ +Q
Sbjct: 66 EQKGLQHRLILHAVKHQDSGALVGFSCPG---VQDSAALTIQES 106
Score = 45.7 bits (108), Expect = 9e-06
Identities = 15/87 (17%), Positives = 33/87 (37%), Gaps = 15/87 (17%)
Query: 408 PPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI----------FHKNR 457
+ + ++ ++ + DG+ A F L+ ++ WF NG+ + R
Sbjct: 8 TARLVAGLEDVQ-VYDGEDAVFSLDLST----IIQGTWFLNGEELKSNEPEGQVEPGALR 62
Query: 458 VKMVSDFGFVVMDIAYVQSHDSGEYVC 484
++ + + V+ DSG V
Sbjct: 63 YRIEQKGLQHRLILHAVKHQDSGALVG 89
Score = 40.4 bits (94), Expect = 6e-04
Identities = 16/100 (16%), Positives = 30/100 (30%), Gaps = 31/100 (31%)
Query: 111 FISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI-- 168
++ L DV+ + E+ F + S + WF NG+ +
Sbjct: 11 LVAGLEDVQVYDGEDAVFSLDL--STII-------------------QGTWFLNGEELKS 49
Query: 169 --------FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVC 200
R ++ + + V+ DSG V
Sbjct: 50 NEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVG 89
Score = 36.9 bits (85), Expect = 0.009
Identities = 19/109 (17%), Positives = 33/109 (30%), Gaps = 18/109 (16%)
Query: 1424 PPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFG-- 1481
R V ++ Q+ + + F L+ ++ WFLNG+ L +
Sbjct: 8 TARLVAGLEDV-QVYDGEDAVFSLDLST----IIQGTWFLNGEELKSNEPEGQVEPGALR 62
Query: 1482 YVAMNFGWVY--------PEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
Y G + +DSG + + A L G
Sbjct: 63 YRIEQKGLQHRLILHAVKHQDSGALV---GFSCPGVQDSAALTIQESSG 108
Score = 35.7 bits (82), Expect = 0.023
Identities = 16/91 (17%), Positives = 25/91 (27%), Gaps = 15/91 (16%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP----------FATGSR 1102
+ L+D + V + F L T WF NG R
Sbjct: 8 TARLVAGLED-VQVYDGEDAVFSLDLSTIIQGT----WFLNGEELKSNEPEGQVEPGALR 62
Query: 1103 VKTVYDFGFISLDMDYVYARDSGEYICRATN 1133
+ L + V +DSG + +
Sbjct: 63 YRIEQKGLQHRLILHAVKHQDSGALVGFSCP 93
Score = 34.2 bits (78), Expect = 0.073
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 15/75 (20%)
Query: 8 NLKIEWFKNGVPL----------SLGSRIRSTFDFGLVTLSINSLRADDS-AIYTCKATN 56
++ WF NG L R R L +++++ DS A+
Sbjct: 35 IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSC-- 92
Query: 57 LLGEAVSTCTLKIED 71
+ L I++
Sbjct: 93 --PGVQDSAALTIQE 105
Score = 33.0 bits (75), Expect = 0.25
Identities = 11/62 (17%), Positives = 19/62 (30%), Gaps = 11/62 (17%)
Query: 240 EWFVNNKPL----------PAGAKFKTTHDFGYVALDIVGAYAEDSGIY-TVKATNSKGS 288
WF+N + L P +++ L + +DSG + S
Sbjct: 39 TWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGALVGFSCPGVQDS 98
Query: 289 AT 290
A
Sbjct: 99 AA 100
Score = 31.9 bits (72), Expect = 0.53
Identities = 4/29 (13%), Positives = 9/29 (31%)
Query: 1854 APTVAEPLKDQNVKEGSAVTLKCRITGKP 1882
+ L+D V +G ++
Sbjct: 8 TARLVAGLEDVQVYDGEDAVFSLDLSTII 36
Score = 31.9 bits (72), Expect = 0.62
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)
Query: 1565 FVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITATETT--EMEHK 1622
V+ E +V +GE A F ++ + W +NG + + +E K
Sbjct: 11 LVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK 68
Query: 1623 GKIQE 1627
G
Sbjct: 69 GLQHR 73
Score = 30.3 bits (68), Expect = 1.6
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 17/95 (17%)
Query: 315 QHLSNLS--EGEIAHFEASLIPVGDQTMTVEFLYNGKPIEAS----------HRIRTVHA 362
L ++ +GE A F L + + NG+ ++++ R R
Sbjct: 13 AGLEDVQVYDGEDAVFSLDL----STIIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQK 68
Query: 363 FGMVVLEILGTKIEDTGVY-TCRATNKWGQAEISV 396
L + K +D+G A +++
Sbjct: 69 GLQHRLILHAVKHQDSGALVGFSCPGVQDSAALTI 103
Score = 29.6 bits (66), Expect = 3.0
Identities = 14/69 (20%), Positives = 21/69 (30%), Gaps = 13/69 (18%)
Query: 601 VIVEWFYNGKKL----------PHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
+ WF NG++L P RYR L + ++SG
Sbjct: 36 IQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDSGAL---VGFSC 92
Query: 651 GSDVTKASL 659
A+L
Sbjct: 93 PGVQDSAAL 101
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 61.4 bits (148), Expect = 3e-09
Identities = 107/719 (14%), Positives = 194/719 (26%), Gaps = 244/719 (33%)
Query: 816 EVFISFHEISPVYPED-CGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTI 874
E + +I V+ + + C+ D +SI+ + + I
Sbjct: 13 EHQYQYKDILSVFEDAFVDNFDCKDVQDM-------------PKSILSKEE--------I 51
Query: 875 DKIAELEGYGHEREDRTIDKIAELEGYGHEREDR-IEEDLGKAPEFLTTPTDLTLAESTL 933
D I R L E + +EE L +FL +P
Sbjct: 52 DHIIM-SKDAVSGTLRLFWT---LLSKQEEMVQKFVEEVLRINYKFLMSPI--------- 98
Query: 934 AHFECRLTPTNDPSMTVEWF-------HNGKALSAG---SRIKTINDFGFVILEINDVYL 983
E R PSM + +N + A SR++ +LE L
Sbjct: 99 -KTEQR-----QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE-----L 147
Query: 984 RDSGLYTCKATNKHGEATT--SCKLTVKGRQGIDVEPQVS-AIF------ANATKNIQKL 1034
R + G + + + + V+ ++ IF N+ + + ++
Sbjct: 148 RPAKNVLI-----DGVLGSGKTW-VALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
+ L + D K+ +
Sbjct: 202 LQKLLYQ--------------IDPNWTSRSDHSSNIKLRIH-------SIQAELRRLLKS 240
Query: 1095 RPFATGSRVKTVYDFGFISL-DMDYVYARDSGEYICRATNKWGTAMTKA-KVICKAKHDI 1152
+P+ L + V A + CK +
Sbjct: 241 KPYEN-------------CLLVLLNV---------------QNAKAWNAFNLSCKI---L 269
Query: 1153 VT--ESQLPDSMSAEK-----LKELEKNYTPEEIEE----------DEIPEE-----PPR 1190
+T Q+ D +SA L TP+E++ ++P E P R
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR 329
Query: 1191 LNQ-SRYKKQNQSAWYDSELSEYQKERANESTELEKHDIVTESQLPDSMSAEKLK--ELE 1247
L+ + + + W + K +K + E S L+ E
Sbjct: 330 LSIIAESIRDGLATW------DNWKH-----VNCDKLTTIIE------SSLNVLEPAEYR 372
Query: 1248 KNYT-----PEE--IEE--------DEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRV 1292
K + P I D I + + ++ ++ E +P + P +
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI-PSI 431
Query: 1293 DPRLRVECSLSTAFFFPFINISTAFLIFNFCLHAVIFSH-------PIFDLGFVSLDIDY 1345
L+V+ A LH I H DL LD Y
Sbjct: 432 YLELKVKLENEYA------------------LHRSIVDHYNIPKTFDSDDLIPPYLD-QY 472
Query: 1346 VY--------PEDQGEYVC---RAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEA 1394
Y + E + + D F + KI +L T
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFR--FLEQ-----KIRHDSTAWNASGSILNT-- 523
Query: 1395 LIQMEAAIKKYTSEIYLTEDD-LYEPEKKQPPRFVTQIKTQDQLVEMQSTKFEC--QLA 1450
L Q +K Y Y+ ++D YE F+ +I+ + +K+ ++A
Sbjct: 524 LQQ----LKFYKP--YICDNDPKYERLVNAILDFLPKIEEN-----LICSKYTDLLRIA 571
Score = 52.9 bits (126), Expect = 1e-06
Identities = 92/671 (13%), Positives = 183/671 (27%), Gaps = 211/671 (31%)
Query: 77 NKSLRPDALP-LIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVHFDC-RVEP 134
K + +++ + K+V +D P+ + + + F +
Sbjct: 18 YKDILSVFEDAFVDNFD-CKDV-QDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75
Query: 135 SKDATMKIGKLLCT-----LTPV----NDPELKVEWF-------HNGKPIFHK---NRVK 175
+ + ++L ++P+ P + + +N +F K +R++
Sbjct: 76 EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQ 135
Query: 176 MVSDFGFVVMDIAYVQSHDSGEYVC---------QWFVNNKPLPAGAKFKTTHDFG--YV 224
+ + V W + + K + DF ++
Sbjct: 136 PYLKL------RQALLELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQCKMDFKIFWL 187
Query: 225 AL-------DIELMLKTLVPFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGI 277
L + ML+ L +D D
Sbjct: 188 NLKNCNSPETVLEMLQKL--------------------------LYQIDPNWTSRSDHSS 221
Query: 278 YTVKATNSKGSATTSGTLKCLERLFVNHNYP--L--------------FSLQ-------- 313
+S + L RL + Y L F+L
Sbjct: 222 NIKLRIHSIQAE--------LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 314 ----FQHLSNLSEGEIA--HFEASLIPVGDQTMTV--EFLYNGKPIEASHRIRTVHAFGM 365
LS + I+ H +L P D+ ++ ++L + +P + + T +
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTP--DEVKSLLLKYL-DCRPQDLPREVLTTNPR-- 328
Query: 366 VVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIK-SLEGLKDG 424
L I+ I D N W VN + K T+ I+ SL L+
Sbjct: 329 -RLSIIAESIRD---GLATWDN-WKH----VNCD----------KLTTIIESSLNVLEPA 369
Query: 425 D-SAHFE-CTLTP--VNDPE--LKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHD 478
+ F+ ++ P + P L + WF ++ VM + + H
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWF------------DVIKS---DVMVVV-NKLHK 413
Query: 479 SGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVH--------FDCRLEP 530
+ I I I L + + + +H +
Sbjct: 414 YS--LVEKQPK-----ESTISI-PSIYL----ELKVKLENEYALHRSIVDHYNIPKTFDS 461
Query: 531 KSDPTMRID-WFFN--GRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 587
+D +F++ G + + F + LD ++ + I T
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQK-----IRHD----ST 512
Query: 588 AMTKAKVICKVLTVIVEWFYNG---KKLPHGHRY-RTFHDFGIVILDILYCYE------- 636
A + I L + FY P R DF I + L C +
Sbjct: 513 AWNASGSILNTLQQLK--FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
Query: 637 ----ENSGVYE 643
E+ ++E
Sbjct: 571 ALMAEDEAIFE 581
Score = 49.9 bits (118), Expect = 1e-05
Identities = 99/687 (14%), Positives = 187/687 (27%), Gaps = 264/687 (38%)
Query: 1206 DSELSEYQKERANESTELEKHDI--VTESQLPDSMSAEKLKELEKN-YTPEEIEEDEIPE 1262
D E E+Q + DI V E D+ + ++++ K+ + EEI D I
Sbjct: 8 DFETGEHQ---------YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIM 56
Query: 1263 EPP------RFITEIESVTVQEAEPV-RFETRVEPRVDPRLRVECSLSTAFFFPFINIST 1315
R + S ++ E V +F VE L + F + +
Sbjct: 57 SKDAVSGTLRLFWTLLS---KQEEMVQKF-------------VEEVLRINYKF----LMS 96
Query: 1316 AFLIFNFCLHAVIFSHPIFDLGFVSLDID-YVYPEDQGEYVCRAYNDHGEAFTKATIS-C 1373
P S+ Y+ E R YND + F K +S
Sbjct: 97 PI--------KTEQRQP-------SMMTRMYI------EQRDRLYND-NQVFAKYNVSRL 134
Query: 1374 KKIPTIQ--LQNQVPK------GML---KT----EALIQMEAAIKKYTSEIY-LTEDDLY 1417
+ ++ L P G+L KT + K +I+ L
Sbjct: 135 QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC-LSYKVQCKMDFKIFWLN----- 188
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQST---KFECQLAPVGD----PNMKVEW-------FL 1463
+ + + ++EM + + D +++ L
Sbjct: 189 ----------LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 1464 NGKPLPH-----KNRFNP-IYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKT 1517
KP + N N ++ A N C+ IL T
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWN----AFNLS-----------CK------------ILLT 271
Query: 1518 TGKPGIIYESQLPKGMKSIEKIREMEASWQHTPEQLVE------DEKPKEAPVFVSQPEA 1571
T + L + I S TP+++ D +P++ P E
Sbjct: 272 TRFKQVT--DFL--SAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP-----REV 322
Query: 1572 QKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNEIVRKITAT-ETTEMEHKGKIQERVV 1630
PR + +I E +R AT + + + K+ ++
Sbjct: 323 LTTN----------------PRRLSIIA------ESIRDGLATWDNWKHVNCDKL-TTII 359
Query: 1631 DASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS------- 1683
++S +P + + F+ ++ F I +
Sbjct: 360 ESSLNVLEPAEY-------------RKMFD-RL------SV--FPPSAHIPTILLSLIWF 397
Query: 1684 ------PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGR 1737
++ S L+ +Q + ++ E K K +
Sbjct: 398 DVIKSDVMVVVNKLHKYS-LVEKQPKESTISIPSIYLEL---KVKLENEYALHRS----- 448
Query: 1738 GGVVPPSFLTTISSAVINVGQLAR-FDAKISATKPLDVYW-------LKNGKKIIPDIRY 1789
+++ + + FD+ LD Y+ LKN +
Sbjct: 449 ---------------IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP------ 487
Query: 1790 KTLEEDNLFTLLI-----IEAVVEDSG 1811
E LF ++ +E +
Sbjct: 488 ---ERMTLFRMVFLDFRFLEQKIRHDS 511
Score = 41.8 bits (97), Expect = 0.002
Identities = 58/416 (13%), Positives = 118/416 (28%), Gaps = 121/416 (29%)
Query: 1151 DI--VTESQLPDSMSAEKLKELEKN-YTPEEIEEDEIPEEPPRLNQSRY------KKQNQ 1201
DI V E D+ + ++++ K+ + EEI D I ++ + KQ +
Sbjct: 20 DILSVFEDAFVDNFDCKDVQDMPKSILSKEEI--DHIIMSKDAVSGTLRLFWTLLSKQEE 77
Query: 1202 SAWYDSELSEYQKERANESTELEKHDIVTESQLPDSMSAEKLKELEKNYTPEEIEEDEIP 1261
++ +E + + I TE + P M+ +++ ++ Y +
Sbjct: 78 MV------QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN-------DNQ 124
Query: 1262 EEPPRFITEIESVT-VQEAEPVRFETRVEPRV-------------------DPRLRVECS 1301
++ ++ +++A E R V +V+C
Sbjct: 125 VFAKYNVSRLQPYLKLRQA---LLELRPAKNVLIDGVLGSGKTWVALDVCLS--YKVQC- 178
Query: 1302 LSTAFFFPF----INIS---TAFLIF----NFCLHAVIFSHPIFDLGF-VSLDIDYVYPE 1349
F +N+ + + D + L I + E
Sbjct: 179 -----KMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 1350 DQGEYVCRAYND------------HGEAFTKATISCKKIPT---IQLQNQVPKGMLKTEA 1394
+ + Y + AF +SCK + T Q+ + + +
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAF---NLSCKILLTTRFKQVTDFLSAATTTHIS 290
Query: 1395 LIQMEAAI-KKYTSEI---YL--TEDDLYEPEKKQPPRFVTQI--------KTQDQLVEM 1440
L + + YL DL PR ++ I T D +
Sbjct: 291 LDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHV 350
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNG-KPLPHKNRFNPIYDFGYVAMNFGWVYPEDS 1495
K +E LN +P ++ F V+P +
Sbjct: 351 NCDKL----------TTIIESSLNVLEPAEYRKMF---DRLS--------VFPPSA 385
Score = 38.7 bits (89), Expect = 0.023
Identities = 110/709 (15%), Positives = 207/709 (29%), Gaps = 181/709 (25%)
Query: 377 DTGV--YTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH-IKSLEGLKDGDSAH---FE 430
+TG Y + + N +C D + I + KD S F
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 431 CTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSG------EYVC 484
L+ E V+ F + ++ F++ I Q S E
Sbjct: 70 TLLS---KQEEMVQKFVEEV---------LRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 485 RAWNNFIFIPPFPIFI---FHQIR--LPS--PSQDNLDV---PEAGK------VHFDCRL 528
R +N+ + + + ++R L P++ N+ + +GK V ++
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAK-NVLIDGVLGSGKTWVALDVCLSYKV 176
Query: 529 EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTA 588
+ K D +I W + + ++ + +D ++ D I +
Sbjct: 177 QCKMD--FKIFWLNLKNCNSPETVLEMLQKL-LYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 589 MTKAKVICKVLTVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYE----- 643
+ ++L Y +++L + N+ +
Sbjct: 234 L--------------------RRLLKSKPYEN----CLLVLLNVQ----NAKAWNAFNLS 265
Query: 644 CR--ATNKYGSDVTKASLKCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADI 701
C+ T ++ VT L + T++ L+ L + D+
Sbjct: 266 CKILLTTRFKQ-VT-DFLSAATTTHISLDH-----HSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 702 EHRQAPVFTVPL--SNIDDLREGENAHFEARLTPTDDPKLKVEW-FW---NGKPMKTGSR 755
R+ + T P S I E+ D W W N + T
Sbjct: 319 P-REV-LTTNPRRLSII-----AESIR--------DGLAT---WDNWKHVNCDKLTT--- 357
Query: 756 FRTFCDFGFVILEIS--PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPK 813
I+E S + P + + ++ +V S + ++ + K
Sbjct: 358 ----------IIESSLNVLEPAEYRKM----FDRL--SVFPPSAHIPTILLSLIWFDVIK 401
Query: 814 G--MEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGME 871
M V H+ S V + + + + Y E + RSI+ +PK +
Sbjct: 402 SDVMVVVNKLHKYSLV-EKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 872 GTIDKIAELEGYGHEREDRTIDKIAELEGYGHEREDRIEEDLGKAPE-FLTTPTDLTLAE 930
L+ Y G+ H + E + FL D E
Sbjct: 461 SDDLIPPYLDQY-----------FYSHIGH-HLKNIEHPERMTLFRMVFL----DFRFLE 504
Query: 931 STLAHFECRLTPTNDPSMTVEWFHNGKALSA-GSRIKTINDFGF---VILEINDVYLRDS 986
+ R H+ A +A GS + T+ F I + + Y R
Sbjct: 505 QKI-----R--------------HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV 545
Query: 987 GLYTCKATNKHGEATTSCKLT--VKGRQGIDVEPQVSAIFANATKNIQK 1033
K E K T ++ I + + AIF A K +Q+
Sbjct: 546 NAIL-DFLPKIEENLICSKYTDLLR----IALMAEDEAIFEEAHKQVQR 589
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG
superfamily, rossmann fold, metal mediated protein interf
immune system; HET: NAG; 3.30A {Homo sapiens} SCOP:
b.1.1.3 b.1.1.4
Length = 291
Score = 57.9 bits (139), Expect = 1e-08
Identities = 35/289 (12%), Positives = 70/289 (24%), Gaps = 25/289 (8%)
Query: 1568 QPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATETTEMEHKGKIQ 1626
P + G C+ P+ + + E + ++ +
Sbjct: 5 SPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPM 64
Query: 1627 ERVVDASEKPAK---------PPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP--TIKWF 1674
+ P P + +G P T+
Sbjct: 65 CYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLL 124
Query: 1675 REDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 1734
R + + P T ++L+ R F+ E Q
Sbjct: 125 RGEKELKREPAVGEPAEVTTTVLVRRD---HHGANFSCRTELDLRPQGLELFENTSAPYQ 181
Query: 1735 GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP---LDVYWLKNGKKIIPDIRYKT 1791
+ V+P + +S V+ V + P V+ +++ P + T
Sbjct: 182 L-QTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTV---T 237
Query: 1792 LEEDNLFTLLIIEAVVEDSGAYE--CVAMNNAGEARCEAELVVQSKKAP 1838
D+ + ED G C + + + S AP
Sbjct: 238 YGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286
Score = 54.1 bits (129), Expect = 2e-07
Identities = 35/260 (13%), Positives = 64/260 (24%), Gaps = 25/260 (9%)
Query: 358 RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKS 417
+ + G + +++ C + GQ+ L P+
Sbjct: 40 KELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVY-----WTPERVELAPL 94
Query: 418 LEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQS 476
G + C + L V K + + V ++ V + +
Sbjct: 95 PSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAE---VTTTVLVRRD 151
Query: 477 HDSGEYVCRAWNNF------IFIPPFPIFIFHQIRLP--SPSQDNLDVPEAGK-VHFDCR 527
H + CR + +F + LP P + V E C
Sbjct: 152 HHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCS 211
Query: 528 LEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGT 587
L+ + G + T + F + V A D G G
Sbjct: 212 LDGLFPVSEAQVHLALGDQRL--NPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGN 269
Query: 588 AMTKAKVICKVLTVIVEWFY 607
+ TV + F
Sbjct: 270 QSQETLQ-----TVTIYSFP 284
Score = 47.2 bits (111), Expect = 3e-05
Identities = 19/197 (9%), Positives = 49/197 (24%), Gaps = 27/197 (13%)
Query: 1690 TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI 1749
+ + +++ + G++ L V P
Sbjct: 43 LLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYW---------TPERVELAP 93
Query: 1750 SSAVINVGQLARFDAKISATKPLD---VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAV 1806
+ VG+ ++ P V L+ K++ + + + +
Sbjct: 94 LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKEL----KREPAVGEPAEVTTTVLVR 149
Query: 1807 VEDSGA-YECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQN 1865
+ GA + C + E + P + P +
Sbjct: 150 RDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA-------TPPQLVSP---RV 199
Query: 1866 VKEGSAVTLKCRITGKP 1882
++ + T+ C + G
Sbjct: 200 LEVDTQGTVVCSLDGLF 216
Score = 43.3 bits (101), Expect = 5e-04
Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 32/128 (25%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
NL + + L + + VT ++ R A ++C+
Sbjct: 117 ANLTVVLLRGEKELKREPAVGEPAE---VTTTVLVRRDHHGANFSCRTEL---------- 163
Query: 67 LKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL-NDVECKENEN 125
LRP L L E+ P +++ F P L + + +
Sbjct: 164 ------------DLRPQGLELFENTSAPYQLQ------TFVLPATPPQLVSPRVLEVDTQ 205
Query: 126 VHFDCRVE 133
C ++
Sbjct: 206 GTVVCSLD 213
Score = 40.6 bits (94), Expect = 0.003
Identities = 24/183 (13%), Positives = 44/183 (24%), Gaps = 30/183 (16%)
Query: 338 QTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+TV L K + R V V +L + ++CR + +
Sbjct: 117 ANLTVVLLRGEKEL---KREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLEL- 172
Query: 398 LECVDKSK----GQPPKFTSHIKSLEGLKDGDSAHFECTLTPVN-DPELKVEWFHNGKPI 452
E P + S L+ C+L + E +V + +
Sbjct: 173 FENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRL 232
Query: 453 -----FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA----------WNNFIFIPPFP 497
+ + + D + C I+ P P
Sbjct: 233 NPTVTYGNDSFSAKASVSVTAED------EGTQRLTCAVILGNQSQETLQTVTIYSFPAP 286
Query: 498 IFI 500
I
Sbjct: 287 NVI 289
Score = 37.9 bits (87), Expect = 0.025
Identities = 22/183 (12%), Positives = 42/183 (22%), Gaps = 47/183 (25%)
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 562
Q + SPS + +P G V C + I+ + G
Sbjct: 1 QTSV-SPS--KVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLP---------GNN 48
Query: 563 SLDMDYVYARDSGEYICRATN--------------------------KWGTAMTKAKVIC 596
+ ++ + +C + W + C
Sbjct: 49 RKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRC 108
Query: 597 KVLTV------IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKY 650
+V V K+L R + V +L + + + CR
Sbjct: 109 QVEGGAPRANLTVVLLRGEKEL---KREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDL 165
Query: 651 GSD 653
Sbjct: 166 RPQ 168
Score = 37.1 bits (85), Expect = 0.043
Identities = 41/296 (13%), Positives = 79/296 (26%), Gaps = 32/296 (10%)
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
L G + + L +E K + + E+S V ++
Sbjct: 11 LPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGN-------NRKVYELSNV--QEDS 61
Query: 779 QYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFISFHEISPVYPEDCGQYSCR 838
Q C + G++ + V + + LP V + C+
Sbjct: 62 QPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNL------------TLRCQ 109
Query: 839 AYNDYGEAVTSASMK-VQGKRSIILESQLPKGMEGTIDKIAELEGYGHEREDRTIDKIAE 897
G + ++ ++G++ + E + + E T + + +G RT +
Sbjct: 110 VEG--GAPRANLTVVLLRGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRP 167
Query: 898 LEGYGHERED--RIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPS-MTVEWFH 954
E + + L T C L S V
Sbjct: 168 QGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLAL 227
Query: 955 NGKALSAGSRIKTINDFGFVILEINDVYLRDSGLY--TCKATNKHGEATTSCKLTV 1008
+ L+ T + F V D G TC + T +T+
Sbjct: 228 GDQRLNPTV---TYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTI 280
Score = 36.4 bits (83), Expect = 0.077
Identities = 20/190 (10%), Positives = 50/190 (26%), Gaps = 17/190 (8%)
Query: 421 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSG 480
L G S C+ + L +E K + ++ V +++ VQ +
Sbjct: 11 LPRGGSVLVTCSTSCDQPKLLGIETPLPKKEL-------LLPGNNRKVYELSNVQ--EDS 61
Query: 481 EYVCRAWNNFI-FIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE-PKSDPTMRI 538
+ +C + + ++ + P + C++E + +
Sbjct: 62 QPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTV 121
Query: 539 DWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN---KWGTAMTKAKVI 595
+ V + ++ + + CR G + +
Sbjct: 122 VLLRGEKELKREPAVGEPAE---VTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSA 178
Query: 596 CKVLTVIVEW 605
L V
Sbjct: 179 PYQLQTFVLP 188
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding
domain of CD48, immune system; HET: NAG; 2.60A {Rattus
norvegicus}
Length = 180
Score = 53.7 bits (129), Expect = 6e-08
Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 35/174 (20%)
Query: 424 GDSAHFECTLTPVNDPE----------LKVEWFHNGKPIF----HKNRVKMVSDFGFVVM 469
G + P+ + +E+F NGK K+RV + G +
Sbjct: 14 GSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG--AL 71
Query: 470 DIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE 529
I V D G+Y R + + S+ + E C +
Sbjct: 72 RIYNVSKEDRGDYYMRMLHE-----TEDQWKITMEVYEMVSKPMIYW-ECSNATLTCEVL 125
Query: 530 PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN 583
+D + + + + M Y + + C+A N
Sbjct: 126 EGTDVE--LKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVN 166
Score = 51.0 bits (122), Expect = 4e-07
Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 31/157 (19%)
Query: 336 GDQTMTVEFLYNGKPIEA----SHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQ 391
+E+ NGK R+ G L I ED G Y R + +
Sbjct: 37 TTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG--ALRIYNVSKEDRGDYYMRMLH-ETE 93
Query: 392 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP 451
+ + +E V + +P I + +A C + D ELK + +
Sbjct: 94 DQWKITME-VYEMVSKP-----MIYW-----ECSNATLTCEVLEGTDVELK--LYQGKEH 140
Query: 452 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
+ + ++Y ++ + C+A N
Sbjct: 141 LRSLRQ-----------KTMSYQWTNLRAPFKCKAVN 166
Score = 45.7 bits (108), Expect = 3e-05
Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 35/155 (22%)
Query: 721 EGENAHFEARLTPTDDPK----------LKVEWFWNGKPMKTGSRF--RTFCDFGFVILE 768
G N P + +E+F NGK S F R D L
Sbjct: 13 TGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALR 72
Query: 769 ISPVYPEDCGQYSCRAYNDYG----------EAVTSASMKVQGKRSIILESQLPKGMEVF 818
I V ED G Y R ++ E V+ + + + L ++ +G +V
Sbjct: 73 IYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECS-NATLTCEVLEGTDVE 131
Query: 819 ISFHE------------ISPVYPEDCGQYSCRAYN 841
+ ++ +S + + C+A N
Sbjct: 132 LKLYQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVN 166
Score = 44.1 bits (104), Expect = 9e-05
Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 29/166 (17%)
Query: 1663 FDGDPLPTIKWFREDFPITSSPDFQ--IHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+++F F+ + T L + V ED G + + +
Sbjct: 35 LHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLHETED 94
Query: 1721 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNG 1780
+ V E V P S+A + ++ +++ +
Sbjct: 95 QW-KITMEVYEM-------VSKPMIYWECSNATLTC--------EVLEGTDVELKLYQGK 138
Query: 1781 KKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + +R KT+ ++C A+N +
Sbjct: 139 E-HLRSLRQKTMSYQWT----------NLRAPFKCKAVNRVSQESE 173
Score = 43.0 bits (101), Expect = 2e-04
Identities = 27/185 (14%), Positives = 54/185 (29%), Gaps = 49/185 (26%)
Query: 513 NLDVPEAGKVHFDCRLEP----------KSDPTMRIDWFFNGRPFATGS----RVKTVYD 558
N++ V P + +++F NG+ S RV
Sbjct: 8 NVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKT 67
Query: 559 FGFISLDMDYVYARDSGEYICRATNKWGTAMT-------------------KAKVICKVL 599
G +L + V D G+Y R ++ A + C+VL
Sbjct: 68 NG--ALRIYNVSKEDRGDYYMRMLHETEDQWKITMEVYEMVSKPMIYWECSNATLTCEVL 125
Query: 600 ---TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTK 656
V ++ + + L + + Y + ++C+A N+ +
Sbjct: 126 EGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEM 174
Query: 657 ASLKC 661
+ C
Sbjct: 175 EVVNC 179
Score = 41.4 bits (97), Expect = 8e-04
Identities = 25/194 (12%), Positives = 45/194 (23%), Gaps = 68/194 (35%)
Query: 944 NDPSMTVEWFHNGKALSAGS----RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGE 999
+E+F NGK S R+ G L I +V D G Y + ++ +
Sbjct: 37 TTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGA--LRIYNVSKEDRGDYYMRMLHETED 94
Query: 1000 ATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQ 1059
+ V E + P+
Sbjct: 95 -QWKITMEVY---------------------------------------EMVSKPMIYW- 113
Query: 1060 LQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYV 1119
E C + +D + + + + M Y
Sbjct: 114 --------ECSNATLTCEVLEGTDVE--LKLYQGKEHLRSLRQ-----------KTMSYQ 152
Query: 1120 YARDSGEYICRATN 1133
+ + C+A N
Sbjct: 153 WTNLRAPFKCKAVN 166
Score = 39.9 bits (93), Expect = 0.002
Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 32/160 (20%)
Query: 153 NDPELKVEWFHNGKPIF----HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNN-- 206
+ +E+F NGK K+RV + G + I V D G+Y +
Sbjct: 37 TTNQKILEYFPNGKKTVFESVFKDRVDLDKTNG--ALRIYNVSKEDRGDYYMRMLHETED 94
Query: 207 ---------KPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTEWFVNNKPLPAGAKFKTT 257
+ + K + L E++ T V + + L + +
Sbjct: 95 QWKITMEVYEMVS---KPMIYWECSNATLTCEVLEGTDVELK-LYQGKEHLRSLRQ---- 146
Query: 258 HDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
+ + + KA N + + C
Sbjct: 147 -------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 179
Score = 37.9 bits (88), Expect = 0.011
Identities = 22/203 (10%), Positives = 49/203 (24%), Gaps = 76/203 (37%)
Query: 6 DPNLKIEWFKNGVPLSLGSRI--RSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
+E+F NG S R D L I ++ +D Y + + E
Sbjct: 38 TNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLH-ETEDQW 96
Query: 64 TCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKEN 123
T+++ + + KP E
Sbjct: 97 KITMEVYEM------------------VSKPMIYW-----------------------EC 115
Query: 124 ENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFV 183
N C V +++++ + + + +
Sbjct: 116 SNATLTCEVL-------------------EGTDVELKLYQGKEHLRSLRQ---------- 146
Query: 184 VMDIAYVQSHDSGEYVCQWFVNN 206
++Y ++ + C+ N
Sbjct: 147 -KTMSYQWTNLRAPFKCK--AVN 166
Score = 36.4 bits (84), Expect = 0.035
Identities = 8/61 (13%), Positives = 22/61 (36%), Gaps = 11/61 (18%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
+++++ ++ L + T+S + A + CKA N + +
Sbjct: 128 TDVELKLYQGKEHLRSLRQK---------TMSYQWT--NLRAPFKCKAVNRVSQESEMEV 176
Query: 67 L 67
+
Sbjct: 177 V 177
Score = 36.0 bits (83), Expect = 0.052
Identities = 5/66 (7%), Positives = 20/66 (30%), Gaps = 11/66 (16%)
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATT 1002
+ ++ + + L + + ++ + + CKA N+ + +
Sbjct: 125 LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESE 173
Query: 1003 SCKLTV 1008
+
Sbjct: 174 MEVVNC 179
Score = 33.3 bits (76), Expect = 0.44
Identities = 23/163 (14%), Positives = 48/163 (29%), Gaps = 29/163 (17%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYV--ALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKC 297
E+F N K + FK D AL I ED G Y ++ + T++
Sbjct: 44 EYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGDYYMRMLHETED-QWKITMEV 102
Query: 298 LERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRI 357
E + P+ + + + E + + ++ + + + +
Sbjct: 103 YEMVSK----PMIYWECSNATLTCE-----------VLEGTDVELKLYQGKEHLRSLRQK 147
Query: 358 RTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
+ + C+A N+ Q + C
Sbjct: 148 T-----------MSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 179
Score = 29.9 bits (67), Expect = 4.9
Identities = 6/67 (8%), Positives = 22/67 (32%), Gaps = 13/67 (19%)
Query: 1438 VEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGE 1497
E + C++ + +++++ + + L + + +
Sbjct: 113 WECSNATLTCEV--LEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAP 159
Query: 1498 YLCRATN 1504
+ C+A N
Sbjct: 160 FKCKAVN 166
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural
genomics, PSI-biology, NEW YORK struc genomics research
consortium, nysgrc; 2.30A {Homo sapiens}
Length = 124
Score = 51.9 bits (124), Expect = 7e-08
Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW--------FHNGKALSAGSRIKTI 968
+T+ E +C + + +++W F N + S+ + +
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTS--LRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLL 59
Query: 969 N-DFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + + + +V L+D G+Y C + T K+ V
Sbjct: 60 HHSANQLSITVPNVTLQDEGVYKCLHYSDSVS-TKEVKVIV 99
Score = 48.1 bits (114), Expect = 2e-06
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 1743 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK--------NGKKIIPDIRYKTLE- 1793
S + + GQ S K + WL N ++ + +Y+ L
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 1794 EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAEL-VVQSKKAPGKQAPA 1844
N ++ + ++D G Y+C+ + + E ++ V+ + K + P+
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCLH-YSDSVSTKEVKVIVLATMKGEFCRYPS 112
Score = 46.5 bits (110), Expect = 6e-06
Identities = 11/90 (12%), Positives = 33/90 (36%), Gaps = 12/90 (13%)
Query: 409 PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVV 468
T+H +++ +++G + +C + ++W N ++ + + +
Sbjct: 2 GSLTNHTETIT-VEEGQTLTLKCVTS--LRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQL 58
Query: 469 MD---------IAYVQSHDSGEYVCRAWNN 489
+ + V D G Y C +++
Sbjct: 59 LHHSANQLSITVPNVTLQDEGVYKCLHYSD 88
Score = 46.5 bits (110), Expect = 6e-06
Identities = 10/109 (9%), Positives = 25/109 (22%), Gaps = 30/109 (27%)
Query: 109 PVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPI 168
+H + +E + + C ++W
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTS-------------------LRKNSSLQWLTPSGFT 42
Query: 169 FHKNRVKMVSDFGFVVMD---------IAYVQSHDSGEYVCQWFVNNKP 208
N ++ + + ++ + V D G Y C +
Sbjct: 43 IFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL--HYSDS 89
Score = 42.7 bits (100), Expect = 1e-04
Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 12/119 (10%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFNGRPFATGSRVKTV-YDFG 560
+ + V E + C + + + + W F N P S+ + + +
Sbjct: 7 HTETITVEEGQTLTLKCVTSLRKNSS--LQWLTPSGFTIFLNEYPVLKNSKYQLLHHSAN 64
Query: 561 FISLDMDYVYARDSGEYICRA-TNKWGTAMTKAKVICKVLTVIVEWFYNGKKLPHGHRY 618
+S+ + V +D G Y C ++ T K V+ + + + + L H H +
Sbjct: 65 QLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVLATMKGEFCRYPSHWRPLEHHHHH 123
Score = 42.7 bits (100), Expect = 1e-04
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 13/102 (12%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFNGRPFATGSRVKT 1105
T+ + + V E + C + + + + W F N P S+ +
Sbjct: 2 GSLTNHTE-TITVEEGQTLTLKCVTSLRKNSS--LQWLTPSGFTIFLNEYPVLKNSKYQL 58
Query: 1106 V-YDFGFISLDMDYVYARDSGEYICRA-TNKWGTAMTKAKVI 1145
+ + +S+ + V +D G Y C ++ T K V+
Sbjct: 59 LHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVIVL 100
Score = 40.4 bits (94), Expect = 7e-04
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 345 LYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
N P+ + + + +H + + + + ++D GVY C + V + +
Sbjct: 44 FLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVS-TKEVKVIVLAT 102
Query: 404 SKGQPPKFTSHIKSLE 419
KG+ ++ SH + LE
Sbjct: 103 MKGEFCRYPSHWRPLE 118
Score = 40.0 bits (93), Expect = 0.001
Identities = 19/103 (18%), Positives = 39/103 (37%), Gaps = 15/103 (14%)
Query: 707 PVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEW--------FWNGKPMKTGSRFR- 757
T I + EG+ + + + ++W F N P+ S+++
Sbjct: 2 GSLTNHTETIT-VEEGQTLTLKCVTSLRKNSS--LQWLTPSGFTIFLNEYPVLKNSKYQL 58
Query: 758 TFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ + + V +D G Y C Y+D +V++ +KV
Sbjct: 59 LHHSANQLSITVPNVTLQDEGVYKCLHYSD---SVSTKEVKVI 98
Score = 35.0 bits (80), Expect = 0.058
Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 20/103 (19%)
Query: 1265 PRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFFPFINISTAFLIFNFCL 1324
E++TV+E + + + R + L+ ++ S + N
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQ------------WLTPSGFTIFLN--- 46
Query: 1325 HAVIFSHPIFDLGF-----VSLDIDYVYPEDQGEYVCRAYNDH 1362
+ + + L +S+ + V +D+G Y C Y+D
Sbjct: 47 EYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDS 89
Score = 34.2 bits (78), Expect = 0.090
Identities = 10/43 (23%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWL-INGHTI 1603
+ E V+EG+ C + + WL +G TI
Sbjct: 2 GSLTNHTETITVEEGQTLTLKC-VTSLRKNSSLQWLTPSGFTI 43
Score = 33.8 bits (77), Expect = 0.14
Identities = 8/60 (13%), Positives = 22/60 (36%), Gaps = 9/60 (15%)
Query: 6 DPNLKIEWFK--------NGVPLSLGSRIR-STFDFGLVTLSINSLRADDSAIYTCKATN 56
N ++W N P+ S+ + +++++ ++ D +Y C +
Sbjct: 28 RKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYS 87
Score = 32.7 bits (74), Expect = 0.31
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 14/119 (11%)
Query: 1432 KTQDQLVEM-QSTKFECQLAPVGDPNMKVEW--------FLNGKPLPHKNRFNPI-YDFG 1481
T+ VE Q+ +C + N ++W FLN P+ +++ + +
Sbjct: 7 HTETITVEEGQTLTLKCVTS--LRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSAN 64
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIR 1540
+++ V +D G Y C + + + + + P + +E
Sbjct: 65 QLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMKGEF-CRYPSHWRPLEHHH 121
Score = 32.3 bits (73), Expect = 0.50
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 1855 PTVAEPLKDQNVKEGSAVTLKCRITGKPRK 1884
++ + V+EG +TLKC + +
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNS 31
Score = 31.1 bits (70), Expect = 1.2
Identities = 12/114 (10%), Positives = 34/114 (29%), Gaps = 20/114 (17%)
Query: 1640 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--------DFPITSSPDFQIHTF 1691
T + E + +++W ++P+ + +Q+
Sbjct: 2 GSLTNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHH 61
Query: 1692 STKSI-LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 1744
S + + + V ++D GV+ + + K ++V +
Sbjct: 62 SANQLSITVPNVTLQDEGVYKCLHYSDSVSTK-EVKVIV----------LATMK 104
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed
death-1 ligand 1, complex, costimulatory, immune system;
2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Length = 222
Score = 53.9 bits (129), Expect = 9e-08
Identities = 28/199 (14%), Positives = 57/199 (28%), Gaps = 33/199 (16%)
Query: 424 GDSAHFECTLTP---VNDPELKVEWFHNGKPIF---------------HKNRVKMVSDF- 464
G + EC ++ L V W K I ++ R +++ D
Sbjct: 16 GSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQL 75
Query: 465 --GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLP---SPSQDNLDVPEA 519
G + I V+ D+G Y C + I ++ P + + P
Sbjct: 76 SLGNAALQITDVKLQDAGVYRCM----ISYGGADYKRITVKVNAPYNKINQRILVVDPVT 131
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD--FGFISLDMDY-VYARDSGE 576
+ C+ E P + W + +G T ++ + +
Sbjct: 132 SEHELTCQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEI 189
Query: 577 YICRATNKWGTAMTKAKVI 595
+ C A+++
Sbjct: 190 FYCTFRRLDPEENHTAELV 208
Score = 51.5 bits (123), Expect = 6e-07
Identities = 23/148 (15%), Positives = 42/148 (28%), Gaps = 22/148 (14%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNK-WGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLK 422
G L+I K++D GVY C + I+V + P + + L
Sbjct: 78 GNAALQITDVKLQDAGVYRCMISYGGADYKRITVKV--------NAPYNKINQRILVVDP 129
Query: 423 DGDSAHFECTLTPVNDPELKVEWFHNGKPIF---HKNRVKMVSDFGFVVMDIAYVQSHDS 479
C P+ +V W + + + F V + + +
Sbjct: 130 VTSEHELTCQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTN 187
Query: 480 GEYVCRAWNNF--------IFIPPFPIF 499
+ C + IP P+
Sbjct: 188 EIFYCTFRRLDPEENHTAELVIPELPLA 215
Score = 48.1 bits (114), Expect = 8e-06
Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 14/145 (9%)
Query: 1694 KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV 1753
+ L + V ++D+GV+ + + GG + V P + + V
Sbjct: 79 NAALQITDVKLQDAGVYRCMI-SYGGADYKRITVKV----------NAPYNKINQRILVV 127
Query: 1754 INVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLE--EDNLFTLLIIEAV-VEDS 1810
V + +V W + +++ T E+ LF + + +
Sbjct: 128 DPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTN 187
Query: 1811 GAYECVAMNNAGEARCEAELVVQSK 1835
+ C E AELV+
Sbjct: 188 EIFYCTFRRLDPEENHTAELVIPEL 212
Score = 46.5 bits (110), Expect = 2e-05
Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 14/97 (14%)
Query: 1653 EQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIH------TFSTKSILIMRQVFMED 1706
+ + +G P + W D + S + F+ S L +
Sbjct: 130 VTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINT---TT 186
Query: 1707 SGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPP 1743
+ +F + +A LV+ E PP
Sbjct: 187 NEIFYCTFRRLDPEENHTAELVIPELPL-----AHPP 218
Score = 43.1 bits (101), Expect = 4e-04
Identities = 30/217 (13%), Positives = 53/217 (24%), Gaps = 66/217 (30%)
Query: 708 VFTV--PLSNIDDLREGENAHFEARLTPTDDPKLK-VEWFW-----------NGKPMKTG 753
+FTV P + G N E + L + +W +G+
Sbjct: 1 MFTVTVPKDLYV-VEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKV 59
Query: 754 ---------SRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRS 804
+ G L+I+ V +D G Y C G ++KV +
Sbjct: 60 QHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYG-GADYKRITVKVNAPYN 118
Query: 805 IILESQL---PKGMEVFIS------------------------------------FHEIS 825
I + L P E ++ F+ S
Sbjct: 119 KINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTS 178
Query: 826 --PVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 860
+ + C E +A + +
Sbjct: 179 TLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLA 215
Score = 41.5 bits (97), Expect = 0.001
Identities = 24/132 (18%), Positives = 36/132 (27%), Gaps = 38/132 (28%)
Query: 1770 KPLDVYWLKNGKKII-----------PDIRYK---TLEEDNL----FTLLIIEAVVEDSG 1811
L VYW K II Y+ L +D L L I + ++D+G
Sbjct: 34 AALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAG 93
Query: 1812 AYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSA 1871
Y C+ + G + V + S
Sbjct: 94 VYRCMI-SYGGADYKRITVKVNAP-------------------YNKINQRILVVDPVTSE 133
Query: 1872 VTLKCRITGKPR 1883
L C+ G P+
Sbjct: 134 HELTCQAEGYPK 145
Score = 41.5 bits (97), Expect = 0.001
Identities = 27/187 (14%), Positives = 51/187 (27%), Gaps = 64/187 (34%)
Query: 1441 QSTKFECQLAPVGDPN---MKVEW---------FLNGKPLP------HKNRFNPIYDF-- 1480
+ EC+ + + V W F++G+ ++ R + D
Sbjct: 17 SNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLS 76
Query: 1481 -GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
G A+ V +D+G Y C + G D R +K
Sbjct: 77 LGNAALQITDVKLQDAGVYRCMISYG-GADYKRITVK----------------------- 112
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLIN 1599
V ++Q + GYP+ V+W +
Sbjct: 113 --------------VNAPYN-----KINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSS 153
Query: 1600 GHTIVNE 1606
H +++
Sbjct: 154 DHQVLSG 160
Score = 41.1 bits (96), Expect = 0.002
Identities = 17/102 (16%), Positives = 30/102 (29%), Gaps = 32/102 (31%)
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIF-------- 169
+ N+ +C+ K + L V W K I
Sbjct: 11 YVVEYGSNMTIECKFPVEKQL--------------DLAALIVYWEMEDKNIIQFVHGEED 56
Query: 170 -------HKNRVKMVSDF---GFVVMDIAYVQSHDSGEYVCQ 201
++ R +++ D G + I V+ D+G Y C
Sbjct: 57 LKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCM 98
Score = 38.1 bits (88), Expect = 0.018
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINS---LRADDSAIYTCKATNLLGEAVS 63
P ++ W + + G + ++ S + + I+ C L E
Sbjct: 144 PKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENH 203
Query: 64 TCTLKI 69
T L I
Sbjct: 204 TAELVI 209
Score = 37.7 bits (87), Expect = 0.019
Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 5/122 (4%)
Query: 901 YGHEREDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWF-HNGKAL 959
YG RI + + + ++ C P V W + + L
Sbjct: 101 YGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTC--QAEGYPKAEVIWTSSDHQVL 158
Query: 960 SAGSRIKTINDFG--FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVE 1017
S + F + + + ++ C E + +L +
Sbjct: 159 SGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPP 218
Query: 1018 PQ 1019
+
Sbjct: 219 NE 220
Score = 37.3 bits (86), Expect = 0.025
Identities = 34/201 (16%), Positives = 48/201 (23%), Gaps = 57/201 (28%)
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVP 1386
LG +L I V +D G Y C +G A K I ++ P
Sbjct: 68 ARLLKDQLSLGNAALQITDVKLQDAGVYRCMI--SYGGADYK---------RITVKVNAP 116
Query: 1387 KGMLKTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFE 1446
+ L+ TSE LT
Sbjct: 117 YNKINQRILVV-----DPVTSEHELT---------------------------------- 137
Query: 1447 CQLAPVGDPNMKVEWFLN-GKPLPHKNRFNPIYDFG---YVAMNFGWVYPEDSGEYLCRA 1502
CQ G P +V W + + L K V + + + C
Sbjct: 138 CQAE--GYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTL-RINTTTNEIFYCTF 194
Query: 1503 TNLYGMDETRAILKTTGKPGI 1523
L + A L P
Sbjct: 195 RRLDPEENHTAELVIPELPLA 215
Score = 36.1 bits (83), Expect = 0.067
Identities = 20/107 (18%), Positives = 32/107 (29%), Gaps = 22/107 (20%)
Query: 934 AHFECRLTPTNDPS---MTVEWFHNGKAL---------------SAGSRIKTINDF---G 972
EC+ + V W K + S R + + D G
Sbjct: 19 MTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLG 78
Query: 973 FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQ 1019
L+I DV L+D+G+Y C + G + V +
Sbjct: 79 NAALQITDVKLQDAGVYRCMISYG-GADYKRITVKVNAPYNKINQRI 124
Score = 34.6 bits (79), Expect = 0.19
Identities = 26/206 (12%), Positives = 54/206 (26%), Gaps = 63/206 (30%)
Query: 511 QDNLDVPEAGKVHFDCRLEPKSDP---TMRIDW---------FFNGRPFATGS------R 552
+D V + +C+ + + + W F +G R
Sbjct: 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQR 67
Query: 553 VKTVYDF---GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV---------ICKVLT 600
+ + D G +L + V +D+G Y C + G + V ++L
Sbjct: 68 ARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYG-GADYKRITVKVNAPYNKINQRILV 126
Query: 601 V-------------------IVEWF-YNGKKLPHGHRYR-------TFHDFGIVILDILY 633
V V W + + L F+ + ++
Sbjct: 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRIN--- 183
Query: 634 CYEENSGVYECRATNKYGSDVTKASL 659
+ ++ C + A L
Sbjct: 184 --TTTNEIFYCTFRRLDPEENHTAEL 207
Score = 33.4 bits (76), Expect = 0.50
Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 14/159 (8%)
Query: 254 FKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQ 313
K G AL I +D+G+Y + G+ T+K VN Y + +
Sbjct: 71 LKDQLSLGNAALQITDVKLQDAGVYRCMI-SYGGADYKRITVK------VNAPYNKINQR 123
Query: 314 FQHLSNLSEGEIAHFEASLIPVGDQTMTVE-FLYNGKPIEASHRIRTVHAFGMV--VLEI 370
+ ++ +A P V + + + + V
Sbjct: 124 ILVVDPVTSEHELTCQAEGYP----KAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTST 179
Query: 371 LGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPP 409
L ++ C + + L + PP
Sbjct: 180 LRINTTTNEIFYCTFRRLDPEENHTAELVIPELPLAHPP 218
Score = 30.0 bits (67), Expect = 5.7
Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 22/102 (21%)
Query: 1055 VFT-SQLQDNLDVPEAGKVHFDCRLEPKSDP---TMRIDW---------FFNGRPFATGS 1101
+FT + +D V + +C+ + + + W F +G
Sbjct: 1 MFTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQ 60
Query: 1102 ------RVKTVYDF---GFISLDMDYVYARDSGEYICRATNK 1134
R + + D G +L + V +D+G Y C +
Sbjct: 61 HSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYG 102
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens}
SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Length = 171
Score = 52.6 bits (126), Expect = 1e-07
Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 45/173 (26%)
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI----------SLDMDYV 569
G V F P + P + W A + F SL + +
Sbjct: 11 GNVTFHV---PSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNL 67
Query: 570 YARDSGEYICRATNKWGTAMTKAKVI------------------CKVL---TVIVEWFYN 608
+ D EY + N T V+ C+VL V ++ +
Sbjct: 68 TSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWECSNATLTCEVLEGTDVELKLYQG 127
Query: 609 GKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+ L + + Y + ++C+A N+ + + C
Sbjct: 128 KEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 169
Score = 50.7 bits (121), Expect = 5e-07
Identities = 23/153 (15%), Positives = 42/153 (27%), Gaps = 28/153 (18%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISV 396
+ E + +S + R L I D Y + N + +
Sbjct: 31 QKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFL 90
Query: 397 N-LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHK 455
LE V K P + +A C + D ELK + + +
Sbjct: 91 YVLEMVSK-----PMIY---------WECSNATLTCEVLEGTDVELK--LYQGKEHLRSL 134
Query: 456 NRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
++Y ++ + C+A N
Sbjct: 135 R-----------QKTMSYQWTNLRAPFKCKAVN 156
Score = 41.4 bits (97), Expect = 7e-04
Identities = 27/218 (12%), Positives = 48/218 (22%), Gaps = 77/218 (35%)
Query: 941 TPTNDPSMTVEWFHNGKAL------------SAGSRIKTINDFGFVILEINDVYLRDSGL 988
P+N P V W + S +R+ G L I ++ D
Sbjct: 17 VPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGS--LTIYNLTSSDEDE 74
Query: 989 YTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQKLEEALYRKDELIPDE 1048
Y ++ N L V
Sbjct: 75 YEMESPNITDTMKFF--LYVL--------------------------------------- 93
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
E + P+ E C + +D ++ + + +
Sbjct: 94 EMVSKPMIYW---------ECSNATLTCEVLEGTDVELK--LYQGKEHLRSLRQ------ 136
Query: 1109 FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVIC 1146
M Y + + C+A N+ V C
Sbjct: 137 -----KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 169
Score = 41.4 bits (97), Expect = 7e-04
Identities = 24/162 (14%), Positives = 48/162 (29%), Gaps = 35/162 (21%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWF--------WNGKPMKTGSRF--RTFCDFGFVILEIS 770
N F P++ P +V W + S F R + D L I
Sbjct: 9 VYGNVTFH---VPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIY 65
Query: 771 PVYPEDCGQYSCRAYNDYG---------EAVTSASMKVQGKRSIILESQLPKGMEVFISF 821
+ D +Y + N E V+ + + + L ++ +G +V +
Sbjct: 66 NLTSSDEDEYEMESPNITDTMKFFLYVLEMVSKPMIYWECS-NATLTCEVLEGTDVELKL 124
Query: 822 HE------------ISPVYPEDCGQYSCRAYNDYGEAVTSAS 851
++ +S + + C+A N +
Sbjct: 125 YQGKEHLRSLRQKTMSYQWTNLRAPFKCKAVNRVSQESEMEV 166
Score = 41.4 bits (97), Expect = 7e-04
Identities = 27/175 (15%), Positives = 47/175 (26%), Gaps = 40/175 (22%)
Query: 148 TLT-PVNDPELKVEWFHNGKPIF------------HKNRVKMVSDFGFVVMDIAYVQSHD 194
T P N P +V W + KNRV + + G + I + S D
Sbjct: 14 TFHVPSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSG--SLTIYNLTSSD 71
Query: 195 SGEYVCQWFVNNK----------PLPAGAKFKTTHDFGYVALDIELMLKTLVPFTEWFVN 244
EY + + K + L E++ T V +
Sbjct: 72 EDEYEMESPNITDTMKFFLYVLEMVS---KPMIYWECSNATLTCEVLEGTDVELK-LYQG 127
Query: 245 NKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
+ L + + + + + KA N + + C E
Sbjct: 128 KEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNCPE 171
Score = 39.1 bits (91), Expect = 0.005
Identities = 19/173 (10%), Positives = 49/173 (28%), Gaps = 38/173 (21%)
Query: 1664 DGDPLPTIKWFREDFPI--------TSSPDFQ--IHTFSTKSILIMRQVFMEDSGVFAVI 1713
PL + W ++ + + F+ ++ + L + + D + +
Sbjct: 19 SNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEME 78
Query: 1714 AENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD 1773
+ N K L V E V P S+A + ++ ++
Sbjct: 79 SPNITDTMKF--FLYVLEM-------VSKPMIYWECSNATLTC--------EVLEGTDVE 121
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ + + + +L + ++C A+N +
Sbjct: 122 LKLYQGKEHL-----------RSLRQKTMSYQWTNLRAPFKCKAVNRVSQESE 163
Score = 36.8 bits (85), Expect = 0.023
Identities = 12/80 (15%), Positives = 21/80 (26%), Gaps = 11/80 (13%)
Query: 1756 VGQLARFDAKISATKPLDVYWLKNGKKII----------PDIRYKTLEEDNLFTLLIIEA 1805
V F + +V W K K+ + + + +L I
Sbjct: 9 VYGNVTFHVPSNVPLK-EVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNL 67
Query: 1806 VVEDSGAYECVAMNNAGEAR 1825
D YE + N +
Sbjct: 68 TSSDEDEYEMESPNITDTMK 87
Score = 36.4 bits (84), Expect = 0.036
Identities = 21/199 (10%), Positives = 48/199 (24%), Gaps = 75/199 (37%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTL 67
+ E + + R D +L+I +L + D Y ++ N+ L
Sbjct: 33 DKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDT--MKFFL 90
Query: 68 KIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVECKENENVH 127
+ +E + KP I E N
Sbjct: 91 YV------------------LEMVSKPM----------------IY-------WECSNAT 109
Query: 128 FDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDI 187
C V +++++ + + + +
Sbjct: 110 LTCEVL-------------------EGTDVELKLYQGKEHLRSLR-----------QKTM 139
Query: 188 AYVQSHDSGEYVCQWFVNN 206
+Y ++ + C+ N
Sbjct: 140 SYQWTNLRAPFKCK--AVN 156
Score = 36.1 bits (83), Expect = 0.044
Identities = 26/161 (16%), Positives = 46/161 (28%), Gaps = 28/161 (17%)
Query: 240 EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
E + + K + D +L I + D Y +++ N + L LE
Sbjct: 37 ELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDTMKF--FLYVLE 94
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT 359
+ P+ + + + E V + T LY GK S R
Sbjct: 95 MVSK----PMIYWECSNATLTCE------------VLEGTDVELKLYQGKEHLRSLR--- 135
Query: 360 VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
+ + C+A N+ Q + C
Sbjct: 136 -------QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 169
Score = 35.7 bits (82), Expect = 0.064
Identities = 16/86 (18%), Positives = 24/86 (27%), Gaps = 13/86 (15%)
Query: 1070 GKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI----------SLDMDYV 1119
G V F P + P + W A + F SL + +
Sbjct: 11 GNVTFHV---PSNVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNL 67
Query: 1120 YARDSGEYICRATNKWGTAMTKAKVI 1145
+ D EY + N T V+
Sbjct: 68 TSSDEDEYEMESPNITDTMKFFLYVL 93
Score = 35.7 bits (82), Expect = 0.068
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 21/93 (22%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P ++ TL C + D + + + L + +
Sbjct: 98 KPMIYWECSNATL--------TCEVLEGTDVELK--LYQGKEHLRSLRQ----------- 136
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
++ + + CKA N+ + + +
Sbjct: 137 KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 169
Score = 33.4 bits (76), Expect = 0.33
Identities = 19/199 (9%), Positives = 47/199 (23%), Gaps = 67/199 (33%)
Query: 600 TVIVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASL 659
+ E + + + R + D L I + YE + N +
Sbjct: 33 DKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITDT------- 85
Query: 660 KCVSKTNLILESQLPEGMEGGLEKIQTLEDAAHLRRTETADIEHRQAPVFTVPLSNIDDL 719
K L + + + P+ SN
Sbjct: 86 ---MKFFLYVLEMVSK-------------------------------PMIYWECSNA--- 108
Query: 720 REGENAHFEARLT--PTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDC 777
LT + ++++ + + +++ + +S +
Sbjct: 109 ----------TLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLR 147
Query: 778 GQYSCRAYNDYGEAVTSAS 796
+ C+A N +
Sbjct: 148 APFKCKAVNRVSQESEMEV 166
Score = 31.4 bits (71), Expect = 1.6
Identities = 6/62 (9%), Positives = 22/62 (35%), Gaps = 11/62 (17%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
+++++ ++ L + +++ + A + CKA N + +
Sbjct: 117 GTDVELKLYQGKEHLRSLRQ-----------KTMSYQWTNLRAPFKCKAVNRVSQESEME 165
Query: 66 TL 67
+
Sbjct: 166 VV 167
Score = 30.7 bits (69), Expect = 2.5
Identities = 5/34 (14%), Positives = 13/34 (38%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISC 1373
+ Y + + + C+A N + ++C
Sbjct: 136 QKTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 169
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily,
immune system; HET: NAG; 3.00A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Length = 201
Score = 52.3 bits (125), Expect = 2e-07
Identities = 25/155 (16%), Positives = 46/155 (29%), Gaps = 6/155 (3%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRT-VHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
++ M + + I ++ RT + + IL + D G Y C A
Sbjct: 35 EKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKR 94
Query: 396 VNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHK 455
+L V S S S + + C+ + PE + W NG+ +
Sbjct: 95 EHLAEVTLSVKADFPTPSI--SDFEIPTSNIRRIICSTSGGF-PEPHLSWLENGEELNAI 151
Query: 456 NRVKMVSDFG--FVVMDIAYVQSHDSGEYVCRAWN 488
N + V + ++C
Sbjct: 152 NTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKY 186
Score = 47.3 bits (112), Expect = 1e-05
Identities = 24/184 (13%), Positives = 52/184 (28%), Gaps = 28/184 (15%)
Query: 424 GDSAHFECTLTPVNDP--ELKVEWFHNGKPIFH------------KNRVKMVSDFGFVVM 469
+ A C + + ++ W K + KNR + +
Sbjct: 9 KEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDIT-NNLSI 67
Query: 470 DIAYVQSHDSGEYVCRAWN----NFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFD 525
I ++ D G Y C F + + + P+PS + ++P +
Sbjct: 68 VILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRII 127
Query: 526 CRLE---PKSDPTMRIDWFFNGRPFATGSRVKTV-YDFGFISLDMD-YVYARDSGEYICR 580
C P+ P + W NG + + + ++ + ++C
Sbjct: 128 CSTSGGFPE--PHLS--WLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCL 183
Query: 581 ATNK 584
Sbjct: 184 IKYG 187
Score = 39.2 bits (91), Expect = 0.006
Identities = 30/216 (13%), Positives = 49/216 (22%), Gaps = 65/216 (30%)
Query: 7 PNLKIEWFK---------NGVPLSLGS-RIRSTFDF-GLVTLSINSLRADDSAIYTCKAT 55
+I W K +G + R+ FD +++ I +LR D Y C
Sbjct: 26 AQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVL 85
Query: 56 NLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHL 115
+ K E + P I D E P
Sbjct: 86 KYEKD-----AFKREHLAEVTLSVKADFPTPSISDFEIP--------------------- 119
Query: 116 NDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVK 175
+ C PE + W NG+ + N
Sbjct: 120 ------TSNIRRIICSTSGGF------------------PEPHLSWLENGEELNAINTTV 155
Query: 176 MVSDFG--FVVMDIAYVQSHDSGEYVCQWFVNNKPL 209
+ V + ++C + L
Sbjct: 156 SQDPETELYAVSSKLDFNMTTNHSFMCL--IKYGHL 189
Score = 37.7 bits (87), Expect = 0.016
Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 32/141 (22%)
Query: 1756 VGQLA----RFDAKISATKPLDVYWLKNGKKII--------PDIRYK---TLEEDNLFTL 1800
V ++A + + +YW K K ++ YK + N ++
Sbjct: 8 VKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSI 67
Query: 1801 LIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEP 1860
+I+ D G YECV + A V P
Sbjct: 68 VILALRPSDEGTYECVVLK----------------YEKDAFKREHLAEVTLSVKADFPTP 111
Query: 1861 -LKDQNVKEGSAVTLKCRITG 1880
+ D + + + C +G
Sbjct: 112 SISDFEIPTSNIRRIICSTSG 132
Score = 36.1 bits (83), Expect = 0.061
Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 26/179 (14%)
Query: 1658 RFEVEFDGDPLPTIKWFREDFPITS--------SPDFQIHTFSTKS---ILIMRQVFMED 1706
V + I W +E + + P+++ T + +++ + D
Sbjct: 17 GHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSD 76
Query: 1707 SGVFA-VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAK 1765
G + V+ + K V V +IS I + R
Sbjct: 77 EGTYECVVLKYEKDAFKREHLAEVTLS-------VKADFPTPSISDFEIPTSNIRRIICS 129
Query: 1766 ISATKPL-DVYWLKNGKKIIPDIRYKTLEEDN-LFTL---LIIEAVVEDSGAYECVAMN 1819
S P + WL+NG+++ + + + L+ + L + + ++ C+
Sbjct: 130 TSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFN--MTTNHSFMCLIKY 186
Score = 35.4 bits (81), Expect = 0.12
Identities = 14/96 (14%), Positives = 24/96 (25%), Gaps = 28/96 (29%)
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFH------- 170
V + E C S + + ++ W K +
Sbjct: 4 VTKEVKEVATLSCGHNVSVE---------------ELAQTRIYWQKEKKMVLTMMSGDMN 48
Query: 171 -----KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
KNR + + I ++ D G Y C
Sbjct: 49 IWPEYKNRTIFDIT-NNLSIVILALRPSDEGTYECV 83
Score = 33.0 bits (75), Expect = 0.57
Identities = 18/118 (15%), Positives = 33/118 (27%), Gaps = 20/118 (16%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFW-----------NGKPMKTGS-RFRTFCDF-GFVI 766
E A + + + +W +G + RT D +
Sbjct: 7 EVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLS 66
Query: 767 LEISPVYPEDCGQYSCRA-------YNDYGEAVTSASMKVQGKRSIILESQLPKGMEV 817
+ I + P D G Y C + A + S+K I + ++P
Sbjct: 67 IVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIR 124
Score = 32.3 bits (73), Expect = 1.2
Identities = 9/65 (13%), Positives = 18/65 (27%), Gaps = 2/65 (3%)
Query: 7 PNLKIEWFKNGVPLSLGS-RIRSTFDFGLVTLSIN-SLRADDSAIYTCKATNLLGEAVST 64
P + W +NG L+ + + + L +S + + C T
Sbjct: 135 PEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQT 194
Query: 65 CTLKI 69
Sbjct: 195 FNWNT 199
Score = 30.3 bits (68), Expect = 4.8
Identities = 9/42 (21%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTI 1603
++ R C+ G+P P + WL NG +
Sbjct: 107 DFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEEL 148
Score = 30.0 bits (67), Expect = 5.1
Identities = 15/117 (12%), Positives = 29/117 (24%), Gaps = 21/117 (17%)
Query: 934 AHFECRLTPTNDP--SMTVEWFHNGKAL--------SAGSRIK---TINDFGFVILEIND 980
A C + + + W K + + K + + + I
Sbjct: 12 ATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILA 71
Query: 981 VYLRDSGLYTCKATNKHG-----EATTSCKLTVKGRQGIDVEPQVSAIFANATKNIQ 1032
+ D G Y C E L+V + P +S + +
Sbjct: 72 LRPSDEGTYECVVLKYEKDAFKREHLAEVTLSV---KADFPTPSISDFEIPTSNIRR 125
Score = 29.6 bits (66), Expect = 7.7
Identities = 10/65 (15%), Positives = 21/65 (32%), Gaps = 8/65 (12%)
Query: 1667 PLPTIKWFREDFPITS-----SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
P P + W + + S D + ++ S L M + F + + +
Sbjct: 135 PEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFN---MTTNHSFMCLIKYGHLRV 191
Query: 1722 KCSAN 1726
+ N
Sbjct: 192 NQTFN 196
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein,
neurite growth regulation; HET: NAG BMA; 2.00A {Mus
musculus}
Length = 361
Score = 54.1 bits (130), Expect = 2e-07
Identities = 20/89 (22%), Positives = 27/89 (30%), Gaps = 3/89 (3%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDV 981
+ C + V N + LS GS G L V
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSP-SNEQVLSQGSNGSVSVRNG--DLFFKKV 308
Query: 982 YLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
+ D G+YTC A + T S +L V
Sbjct: 309 QVEDGGVYTCYAMGETFNETLSVELKVYN 337
Score = 54.1 bits (130), Expect = 2e-07
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 5/114 (4%)
Query: 1739 GVVPPSFLT----TISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEE 1794
+ F S+ ++G V+ + ++++ ++
Sbjct: 239 NIFSLDFFNCSEYKESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSV 298
Query: 1795 DNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAA 1848
N L + VED G Y C AM EL V + G AA
Sbjct: 299 RNG-DLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFTLHGHHDTLNAAA 351
Score = 46.8 bits (111), Expect = 4e-05
Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 4 RADPNLKIEW-FKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAV 62
+ K+ N LS GS + G L ++ +D +YTC A
Sbjct: 271 KQQGMTKVWVSPSNEQVLSQGSNGSVSVRNG--DLFFKKVQVEDGGVYTCYAMGETFNET 328
Query: 63 STCTLKI-----EDRHWLLNKSLRPDALPLIE 89
+ LK+ H LN + P + P E
Sbjct: 329 LSVELKVYNFTLHGHHDTLNAAADPWSHPQFE 360
Score = 46.4 bits (110), Expect = 5e-05
Identities = 14/85 (16%), Positives = 24/85 (28%), Gaps = 1/85 (1%)
Query: 1645 KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 1704
K A D + + + + + S + L ++V +
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQGSNGSVSVRN-GDLFFKKVQV 310
Query: 1705 EDSGVFAVIAENRGGKAKCSANLVV 1729
ED GV+ A S L V
Sbjct: 311 EDGGVYTCYAMGETFNETLSVELKV 335
Score = 46.4 bits (110), Expect = 7e-05
Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 7/84 (8%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGS--RFRTFCDFGFVILEISPVYPEDC 777
G+ KV + + + + + + G L V ED
Sbjct: 259 HLGDTLTIRCDTKQ--QGMTKVWVSPSNEQVLSQGSNGSVSVRN-G--DLFFKKVQVEDG 313
Query: 778 GQYSCRAYNDYGEAVTSASMKVQG 801
G Y+C A + S +KV
Sbjct: 314 GVYTCYAMGETFNETLSVELKVYN 337
Score = 45.2 bits (107), Expect = 1e-04
Identities = 12/90 (13%), Positives = 22/90 (24%), Gaps = 5/90 (5%)
Query: 506 LPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT-GSRVKTVYDFGFISL 564
+ + + C K ++ + + GS G L
Sbjct: 248 CSEYKESAWEAHLGDTLTIRCDT--KQQGMTKVWVSPSNEQVLSQGSNGSVSVRNG--DL 303
Query: 565 DMDYVYARDSGEYICRATNKWGTAMTKAKV 594
V D G Y C A + ++
Sbjct: 304 FFKKVQVEDGGVYTCYAMGETFNETLSVEL 333
Score = 44.1 bits (104), Expect = 3e-04
Identities = 14/97 (14%), Positives = 25/97 (25%), Gaps = 13/97 (13%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT-GSRVKTVY 1107
+ + + L D + C K ++ + + GS
Sbjct: 249 SEYKESAWEAHLGDT--------LTIRCDT--KQQGMTKVWVSPSNEQVLSQGSNGSVSV 298
Query: 1108 DFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKV 1144
G L V D G Y C A + ++
Sbjct: 299 RNG--DLFFKKVQVEDGGVYTCYAMGETFNETLSVEL 333
Score = 43.3 bits (102), Expect = 7e-04
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 9/81 (11%)
Query: 321 SEGEIAHF--EASLIPVGDQTMTVEFLYNGKPIEA-SHRIRTVHAFGMVVLEILGTKIED 377
G+ + + ++ + + + + G L ++ED
Sbjct: 259 HLGDTLTIRCDTKQQGMTKVWVS----PSNEQVLSQGSNGSVSVRNGD--LFFKKVQVED 312
Query: 378 TGVYTCRATNKWGQAEISVNL 398
GVYTC A + +SV L
Sbjct: 313 GGVYTCYAMGETFNETLSVEL 333
Score = 41.4 bits (97), Expect = 0.002
Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 52/226 (23%)
Query: 298 LERLFVNHNYPLFSLQ---FQHLSNL-----SEGEIAHFEASLIPVGDQTMTVEFLYNGK 349
LE L + +N + + F+ ++ L S+ +I+ F LI G++ + L
Sbjct: 114 LEVLLLYNN-HIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDL-- 170
Query: 350 PIEASHRIRTVHAFGMVVLEILGTKIEDTGVY--------TCRA---TNKWGQAEISVNL 398
+S++++ + + L G+Y C+ + W ++S +
Sbjct: 171 ---SSNKLKKLPLTDLQKL----PAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVM 223
Query: 399 ECVDKSKGQPPKFTSHIKSLEGLK------------DGDSAHFECTLTPVNDPELKVEWF 446
+ + K +I SL+ GD+ C KV
Sbjct: 224 DFQEDLYCMHSKKLHNIFSLDFFNCSEYKESAWEAHLGDTLTIRCDTKQ--QGMTKVWVS 281
Query: 447 HNGKPIFHKNRVKMVSDFGFVVMD----IAYVQSHDSGEYVCRAWN 488
+ + + + S+ V + VQ D G Y C A
Sbjct: 282 PSNEQVLSQG-----SNGSVSVRNGDLFFKKVQVEDGGVYTCYAMG 322
Score = 39.4 bits (92), Expect = 0.010
Identities = 14/86 (16%), Positives = 22/86 (25%), Gaps = 3/86 (3%)
Query: 1436 QLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDS 1495
+ + C KV + + + + N + F V ED
Sbjct: 257 EAHLGDTLTIRCDT--KQQGMTKVWVSPSNEQVLSQGS-NGSVSVRNGDLFFKKVQVEDG 313
Query: 1496 GEYLCRATNLYGMDETRAILKTTGKP 1521
G Y C A + LK
Sbjct: 314 GVYTCYAMGETFNETLSVELKVYNFT 339
Score = 38.7 bits (90), Expect = 0.018
Identities = 8/58 (13%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Query: 605 WFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLK 660
+ +++ + + + + + E+ GVY C A + ++ LK
Sbjct: 280 VSPSNEQVLSQGSNGSVSVRNGDLFFKKVQ---VEDGGVYTCYAMGETFNETLSVELK 334
Score = 36.4 bits (84), Expect = 0.087
Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Query: 808 ESQLPKGMEVFISFH----EISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQG 856
E L +G +S V ED G Y+C A + S +KV
Sbjct: 285 EQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYN 337
Score = 35.2 bits (81), Expect = 0.20
Identities = 17/99 (17%), Positives = 30/99 (30%), Gaps = 21/99 (21%)
Query: 116 NDVECKENENVH-------FDCRVEPSKDATMKIGK---LLCTLTPVNDPELKVEWFHNG 165
D+ C ++ +H F+C +G + C KV +
Sbjct: 227 EDLYCMHSKKLHNIFSLDFFNCSEYKESAWEAHLGDTLTIRCDTKQ--QGMTKVWVSPSN 284
Query: 166 KPIFHKNRVKMVSDFGFVVMD----IAYVQSHDSGEYVC 200
+ + + S+ V + VQ D G Y C
Sbjct: 285 EQVLSQG-----SNGSVSVRNGDLFFKKVQVEDGGVYTC 318
Score = 34.8 bits (80), Expect = 0.23
Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 3/61 (4%)
Query: 237 PFTEWFVNNKPL-PAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+N+ + G+ + G L ED G+YT A + T S L
Sbjct: 276 TKVWVSPSNEQVLSQGSNGSVSVRNG--DLFFKKVQVEDGGVYTCYAMGETFNETLSVEL 333
Query: 296 K 296
K
Sbjct: 334 K 334
Score = 34.8 bits (80), Expect = 0.26
Identities = 8/32 (25%), Positives = 10/32 (31%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
L V ED G Y C A + +
Sbjct: 302 DLFFKKVQVEDGGVYTCYAMGETFNETLSVEL 333
Score = 31.4 bits (71), Expect = 2.8
Identities = 3/39 (7%), Positives = 12/39 (30%)
Query: 1568 QPEAQKVQEGEPARFCTRVTGYPRPRVMWLINGHTIVNE 1606
+ A + G+ +V + ++++
Sbjct: 252 KESAWEAHLGDTLTIRCDTKQQGMTKVWVSPSNEQVLSQ 290
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond,
glycoprotein, immunoglobulin membrane, transmembrane;
HET: NAG; 2.21A {Mus musculus}
Length = 108
Score = 49.9 bits (119), Expect = 2e-07
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 13/104 (12%)
Query: 915 KAPEF-LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF 973
K + ++T+ E A CR+ + + +++W + + K + D
Sbjct: 4 KGSQGQFPLTQNVTVVEGGTAILTCRVD--QNDNTSLQWSNPAQQTLYFDDKKALRDNRI 61
Query: 974 VI---------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + ++DV L D G YTC T+ LTV
Sbjct: 62 ELVRASWHELSISVSDVSLSDEGQYTCSL-FTMPVKTSKAYLTV 104
Score = 43.7 bits (103), Expect = 4e-05
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 11/104 (10%)
Query: 1740 VVPPSFLTTISSAV-INVGQLARFDAKISATKPLDVYWLKNGKKII--------PDIRYK 1790
V ++ V + G A ++ + W ++ + D R +
Sbjct: 3 VKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIE 62
Query: 1791 TLEED-NLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ + ++ + + + D G Y C +A L V
Sbjct: 63 LVRASWHELSISVSDVSLSDEGQYTCSL-FTMPVKTSKAYLTVL 105
Score = 42.9 bits (101), Expect = 6e-05
Identities = 15/112 (13%), Positives = 32/112 (28%), Gaps = 34/112 (30%)
Query: 106 FDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNG 165
P+ +V E CRV+ + ++W +
Sbjct: 8 GQFPLT----QNVTVVEGGTAILTCRVD-------------------QNDNTSLQWSNPA 44
Query: 166 KPIFHKNRVKMVSDFGFVVMD---------IAYVQSHDSGEYVCQWFVNNKP 208
+ + + K + D ++ ++ V D G+Y C + P
Sbjct: 45 QQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCS--LFTMP 94
Score = 42.9 bits (101), Expect = 7e-05
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 11/70 (15%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD---------IAYV 474
G +A C + + ++W + + + + K + D ++ ++ V
Sbjct: 21 GGTAILTCRVD--QNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDV 78
Query: 475 QSHDSGEYVC 484
D G+Y C
Sbjct: 79 SLSDEGQYTC 88
Score = 37.5 bits (87), Expect = 0.006
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 17/104 (16%)
Query: 509 PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFNGRPFATGSRVKTVY-DF 559
P N+ V E G CR++ + + + W +F+ + +R++ V +
Sbjct: 11 PLTQNVTVVEGGTAILTCRVDQNDNTS--LQWSNPAQQTLYFDDKKALRDNRIELVRASW 68
Query: 560 GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+S+ + V D G+Y C T K LTV+
Sbjct: 69 HELSISVSDVSLSDEGQYTCSLF----TMPVKTSKAY--LTVLG 106
Score = 37.2 bits (86), Expect = 0.008
Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 11/92 (11%)
Query: 705 QAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEW--------FWNGKPMKTGSRF 756
+ PL+ + EG A R+ D+ ++W +++ K +R
Sbjct: 4 KGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTS--LQWSNPAQQTLYFDDKKALRDNRI 61
Query: 757 R-TFCDFGFVILEISPVYPEDCGQYSCRAYND 787
+ + + +S V D GQY+C +
Sbjct: 62 ELVRASWHELSISVSDVSLSDEGQYTCSLFTM 93
Score = 36.4 bits (84), Expect = 0.015
Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 11/85 (12%)
Query: 1054 PVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFNGRPFATGSRVKT 1105
L N+ V E G CR++ + + + W +F+ + +R++
Sbjct: 6 SQGQFPLTQNVTVVEGGTAILTCRVDQNDNTS--LQWSNPAQQTLYFDDKKALRDNRIEL 63
Query: 1106 VY-DFGFISLDMDYVYARDSGEYIC 1129
V + +S+ + V D G+Y C
Sbjct: 64 VRASWHELSISVSDVSLSDEGQYTC 88
Score = 31.0 bits (70), Expect = 1.1
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 344 FLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTC 383
++ K +RI V ++ + + + + D G YTC
Sbjct: 48 LYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTC 88
Score = 30.2 bits (68), Expect = 1.8
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDH 1362
S+ + V D+G+Y C +
Sbjct: 72 SISVSDVSLSDEGQYTCSLFTMP 94
Score = 30.2 bits (68), Expect = 2.0
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 9/56 (16%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFD--FGLV-------TLSINSLRADDSAIYTC 52
+ N ++W ++ D LV ++S++ + D YTC
Sbjct: 33 NDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTC 88
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune
system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A
4f8q_A
Length = 226
Score = 51.2 bits (122), Expect = 8e-07
Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 32/198 (16%)
Query: 424 GDSAHFECTLTPVNDPE-LKVEWFHNGKPIF-----------------HKNRVKMVSDF- 464
G+ A C L P E ++++W + ++ R ++ D
Sbjct: 19 GEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI 78
Query: 465 --GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKV 522
G + I V + DSG+Y+C + F + + D + G +
Sbjct: 79 TAGKAALRIHNVTASDSGKYLCYF-QDGDFYEKALVELKVAALGSDLHVDV-KGYKDGGI 136
Query: 523 HFDCRLEPKSD---PTMRIDWF-FNGRPFATGSRVKTVYDFGFISLDMDYVY-ARDSGEY 577
H +CR S P +I W G T G ++ +
Sbjct: 137 HLECR----STGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGV 192
Query: 578 ICRATNKWGTAMTKAKVI 595
C + A +
Sbjct: 193 SCTIRSSLLGLEKTASIS 210
Score = 44.7 bits (105), Expect = 1e-04
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 11/127 (8%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKD 423
G L I D+G Y C + + V L + S +
Sbjct: 81 GKAALRIHNVTASDSGKYLCYFQDGDFYEKALVEL--------KVAALGSDLHVDVKGYK 132
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFG--FVVMDIAYVQSHDSGE 481
H EC + P+ +++W +N +V+D + V ++
Sbjct: 133 DGGIHLECR-STGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEG 191
Query: 482 YVCRAWN 488
C +
Sbjct: 192 VSCTIRS 198
Score = 40.5 bits (94), Expect = 0.003
Identities = 24/110 (21%), Positives = 34/110 (30%), Gaps = 24/110 (21%)
Query: 921 TTPTDLTLAE--STLAHFECRLTPTNDPS-MTVEWFH-----------NGKALSAG---- 962
P+ LA A C L PT M ++W +GK +
Sbjct: 8 LGPSGPILAMVGED-ADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAP 66
Query: 963 --SRIKTINDF---GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLT 1007
R + D G L I++V DSG Y C + +L
Sbjct: 67 YRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELK 116
Score = 40.1 bits (93), Expect = 0.004
Identities = 30/195 (15%), Positives = 56/195 (28%), Gaps = 39/195 (20%)
Query: 145 LLCTLTPVNDPE-LKVEWFHNGKPIF-----------------HKNRVKMVSDF---GFV 183
L C L P E ++++W + ++ R ++ D G
Sbjct: 24 LPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKA 83
Query: 184 VMDIAYVQSHDSGEYVCQWFVNNKP--------LPAGAKFKTTHDFGYVALDIELMLK-- 233
+ I V + DSG+Y+C + + L A H D + L+
Sbjct: 84 ALRIHNVTASDSGKYLC--YFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHLECR 141
Query: 234 ----TLVPFTEWFVNN-KPLPAGAKFKTTHDFG-YVALDIVGAYAEDSGIYTVKATNSKG 287
P +W N + +P G Y V + +S
Sbjct: 142 STGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLL 201
Query: 288 SATTSGTLKCLERLF 302
+ ++ + F
Sbjct: 202 GLEKTASISIADPFF 216
Score = 38.5 bits (89), Expect = 0.010
Identities = 27/197 (13%), Positives = 53/197 (26%), Gaps = 64/197 (32%)
Query: 1441 QSTKFECQLAPVGDP-NMKVEWFLNGKPLP-----------------HKNRFNPIYDF-- 1480
+ C L P M+++W + ++ R + + D
Sbjct: 20 EDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGIT 79
Query: 1481 -GYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKI 1539
G A+ V DSG+YLC + ++ LK
Sbjct: 80 AGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALG------------------ 121
Query: 1540 REMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLIN 1599
+ V+ + K+ + + C YP+P++ W N
Sbjct: 122 ----------SDLHVDVKGYKDGGIHLE---------------CRSTGWYPQPQIQWSNN 156
Query: 1600 GHTIVNEIVRKITATET 1616
+ + + A
Sbjct: 157 KGENIPTVEAPVVADGV 173
Score = 35.8 bits (82), Expect = 0.090
Identities = 30/193 (15%), Positives = 53/193 (27%), Gaps = 60/193 (31%)
Query: 722 GENAHFEARLTPTDDPK-LKVEWF-----------WNGKPMKTG---------SRFRTFC 760
GE+A L PT + ++++W +GK ++ S R
Sbjct: 19 GEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGI 78
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYND--YGEA-----------VTSASMKVQGKRSIIL 807
G L I V D G+Y C + Y +A +K I L
Sbjct: 79 TAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKGYKDGGIHL 138
Query: 808 E-------------------SQLPKGMEVFIS-----FHEIS--PVYPEDCGQYSCRAYN 841
E +P ++ + + + SC +
Sbjct: 139 ECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRS 198
Query: 842 DYGEAVTSASMKV 854
+AS+ +
Sbjct: 199 SLLGLEKTASISI 211
Score = 35.5 bits (81), Expect = 0.12
Identities = 21/116 (18%), Positives = 35/116 (30%), Gaps = 30/116 (25%)
Query: 1774 VYWLKNGKKIIP--DIRYK---TLEEDNL----FTLLIIEAVVEDSGAYECVAMNNAGEA 1824
V +GK++ Y+ ++ D + L I DSG Y C +
Sbjct: 50 VNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYE 109
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ EL A ++ D + + L+CR TG
Sbjct: 110 KALVELK---------------------VAALGSDLHVDVKGYKDGGIHLECRSTG 144
Score = 32.4 bits (73), Expect = 1.2
Identities = 27/200 (13%), Positives = 51/200 (25%), Gaps = 50/200 (25%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWF-----------FNGRPFATG------S 551
+ C L P M + W +G+
Sbjct: 10 PSGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRG 69
Query: 552 RVKTVYDF---GFISLDMDYVYARDSGEYICRATNK--WGTAMTKAKVICKVLTVI---- 602
R + D G +L + V A DSG+Y+C + + A+ + KV +
Sbjct: 70 RTSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVK 129
Query: 603 ---------------------VEWF-YNGKKLPHGHRYRTFHDFGIV-ILDILYCYEENS 639
++W G+ +P G+ + + +
Sbjct: 130 GYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMRGSSG 189
Query: 640 GVYECRATNKYGSDVTKASL 659
C + AS+
Sbjct: 190 EGVSCTIRSSLLGLEKTASI 209
Score = 31.6 bits (71), Expect = 2.2
Identities = 8/70 (11%), Positives = 24/70 (34%), Gaps = 8/70 (11%)
Query: 1667 PLPTIKWFREDFPITSSPDFQIH-----TFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 1721
P P I+W + + + ++ + +IMR + +
Sbjct: 147 PQPQIQWSNNKGENIPTVEAPVVADGVGLYAVAASVIMR---GSSGEGVSCTIRSSLLGL 203
Query: 1722 KCSANLVVEE 1731
+ +A++ + +
Sbjct: 204 EKTASISIAD 213
Score = 30.8 bits (69), Expect = 3.0
Identities = 17/95 (17%), Positives = 27/95 (28%), Gaps = 21/95 (22%)
Query: 1061 QDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWF-----------FNGRPFATG------SR 1102
+ C L P M + W +G+ R
Sbjct: 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGR 70
Query: 1103 VKTVYDF---GFISLDMDYVYARDSGEYICRATNK 1134
+ D G +L + V A DSG+Y+C +
Sbjct: 71 TSILRDGITAGKAALRIHNVTASDSGKYLCYFQDG 105
Score = 30.1 bits (67), Expect = 6.8
Identities = 10/66 (15%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYND--HGEAFTKATISCKKIPTIQLQNQ 1384
G +L I V D G+Y+C + + +A + ++
Sbjct: 71 TSILRDGITAGKAALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAALGSDLHVDVKG 130
Query: 1385 VPKGML 1390
G +
Sbjct: 131 YKDGGI 136
Score = 29.3 bits (65), Expect = 9.6
Identities = 13/87 (14%), Positives = 27/87 (31%), Gaps = 20/87 (22%)
Query: 8 NLKIEWFKNGVPLSL--------------------GSRIRSTFDFGLVTLSINSLRADDS 47
++++W + + + S +R G L I+++ A DS
Sbjct: 36 TMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDS 95
Query: 48 AIYTCKATNLLGEAVSTCTLKIEDRHW 74
Y C + + LK+
Sbjct: 96 GKYLCYFQDGDFYEKALVELKVAALGS 122
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor,
two-domain structure, V-SET, C2-SET, IG-like domain,
6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens}
PDB: 2zg3_A* 2zg2_A
Length = 214
Score = 50.6 bits (120), Expect = 9e-07
Identities = 30/209 (14%), Positives = 58/209 (27%), Gaps = 37/209 (17%)
Query: 416 KSLEGLKDGDSAHFECTLTP-----VNDPELKVEWFHNGKPIFH---------------- 454
KS+ + G C+ + + P L V WF +G+ ++
Sbjct: 8 KSVTVQE-GLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPE 66
Query: 455 -KNRVKMVSDF--GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPF---PIFIFHQIRLPS 508
+ R +++ D + I + D+G Y R + + + +
Sbjct: 67 TQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEK 126
Query: 509 PSQDNLDVPEAG-KVHFDCRLEPKSD--PTMRIDWFFNGRPFATGSRVKTVYDFGFISLD 565
P L+ E+G C L + P + W N +
Sbjct: 127 PDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALS-PLDPETTRSSELTLTPRP 185
Query: 566 MDYVYARDSGEYICRATNKWGTAMTKAKV 594
D C+ + T+ V
Sbjct: 186 ED-----HGTNLTCQMKRQGAQVTTERTV 209
Score = 38.3 bits (88), Expect = 0.014
Identities = 23/140 (16%), Positives = 41/140 (29%), Gaps = 10/140 (7%)
Query: 261 GYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNL 320
+L I A ED+G Y + + + +L + + L L
Sbjct: 80 KNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQ----NKLNLEVTALIEKPDIHFLEPL 135
Query: 321 SEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 380
G SL + + F + G + T + L + +
Sbjct: 136 ESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSS----ELTLTPRPEDHGTN 191
Query: 381 YTCRATNKWGQ--AEISVNL 398
TC+ + Q E +V L
Sbjct: 192 LTCQMKRQGAQVTTERTVQL 211
Score = 38.3 bits (88), Expect = 0.015
Identities = 29/251 (11%), Positives = 52/251 (20%), Gaps = 71/251 (28%)
Query: 920 LTTPTDLTLAESTLAHFECRLTP-----TNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
L +T+ E C + + P + V WF +G+ + T N V
Sbjct: 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRV 63
Query: 975 I-------------------LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGID 1015
L I D + D+G Y + + + +
Sbjct: 64 KPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLN------ 117
Query: 1016 VEPQVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFD 1075
L P + + +
Sbjct: 118 ----------------------------LEVTALIEKPDIHFLE-----PLESGRPTRLS 144
Query: 1076 CRLEPKSD--PTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATN 1133
C L + P + W N + D C+
Sbjct: 145 CSLPGSCEAGPPLTFSWTGNALS-PLDPETTRSSELTLTPRPED-----HGTNLTCQMKR 198
Query: 1134 KWGTAMTKAKV 1144
+ T+ V
Sbjct: 199 QGAQVTTERTV 209
Score = 37.5 bits (86), Expect = 0.025
Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 39/188 (20%)
Query: 147 CTLTP-----VNDPELKVEWFHNGKPIFH-----------------KNRVKMVSDF--GF 182
C+ + + P L V WF +G+ ++ + R +++ D
Sbjct: 22 CSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKN 81
Query: 183 VVMDIAYVQSHDSGEYVCQ---------WFVNNKPLPAGAKFKTTHDFGYVALDIELMLK 233
+ I + D+G Y + + NK D ++
Sbjct: 82 CSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHFLEPLESGRPT 141
Query: 234 TLVPFTEWFVNNKPLP----AGAKFKTTHDFGYV--ALDIVGAYAEDSGIYTVKATNSKG 287
L P G L + + T +
Sbjct: 142 RLSCSLPGSCEAGPPLTFSWTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGA 201
Query: 288 SATTSGTL 295
TT T+
Sbjct: 202 QVTTERTV 209
Score = 35.6 bits (81), Expect = 0.094
Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 6/61 (9%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCT 66
P L W N + RS+ L++ D TC+ + + T
Sbjct: 155 PPLTFSWTGNALSPLDPETTRSS------ELTLTPRPEDHGTNLTCQMKRQGAQVTTERT 208
Query: 67 L 67
+
Sbjct: 209 V 209
Score = 35.2 bits (80), Expect = 0.14
Identities = 11/98 (11%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDF 762
A + + ++ L G L + + + + W G + T
Sbjct: 119 EVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDPETT---- 174
Query: 763 GFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L ++P + +C+ + T ++++
Sbjct: 175 RSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212
Score = 32.9 bits (74), Expect = 0.66
Identities = 22/110 (20%), Positives = 35/110 (31%), Gaps = 24/110 (21%)
Query: 1055 VFTSQLQDNLDVPEAGKVHFDCRLEP-----KSDPTMRIDWFFNG------RPFATGSRV 1103
V+ Q+Q ++ V E V C S P + + WF +G AT +
Sbjct: 1 VYELQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPD 60
Query: 1104 KTVYD-----FGFI--------SLDMDYVYARDSGEYICRATNKWGTAMT 1140
+ V F + SL + D+G Y R +
Sbjct: 61 RRVKPETQGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYS 110
Score = 32.9 bits (74), Expect = 0.81
Identities = 18/158 (11%), Positives = 37/158 (23%), Gaps = 35/158 (22%)
Query: 532 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
++P R+ GR G K SL + D+G Y R +
Sbjct: 57 NNPDRRVKPETQGRFRLLGDVQK-----KNCSLSIGDARMEDTGSYFFRVERGRDVKYSY 111
Query: 592 AKVICKV------------------------LTVIVEWFYNGKKLP----HGHRYRTFHD 623
+ + L+ + G+
Sbjct: 112 QQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP 171
Query: 624 FGIV--ILDILYCYEENSGVYECRATNKYGSDVTKASL 659
L + E++ C+ + T+ ++
Sbjct: 172 ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209
Score = 32.5 bits (73), Expect = 0.82
Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 905 REDRIEEDLGKAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSR 964
+++++ ++ E L C L + + + + G ALS
Sbjct: 112 QQNKLNLEVTALIEKPDIHFLEPLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSPLDP 171
Query: 965 IKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
T + L + TC+ + + TT + +
Sbjct: 172 ETTRSS----ELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQL 211
Score = 32.5 bits (73), Expect = 0.84
Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 34/131 (25%)
Query: 1769 TKPLDVYWLKNGKKIIPDI-----------------RYKTL--EEDNLFTLLIIEAVVED 1809
+ PL VYW ++G+ R++ L + +L I +A +ED
Sbjct: 34 SPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMED 93
Query: 1810 SGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEG 1869
+G+Y + + + A E P + + ++ G
Sbjct: 94 TGSYFFRVERGRDVKYSYQQNKLNLE------------VTALIEKPDIHFL---EPLESG 138
Query: 1870 SAVTLKCRITG 1880
L C + G
Sbjct: 139 RPTRLSCSLPG 149
Score = 31.0 bits (69), Expect = 3.2
Identities = 13/108 (12%), Positives = 25/108 (23%), Gaps = 11/108 (10%)
Query: 1621 HKGKIQERVVDASEKPA-KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFP 1679
+ K+ V EKP + +P R + P T W
Sbjct: 112 QQNKLNLEVTALIEKPDIHFLEPLESGRPTRL----SCSLPGSCEAGPPLTFSWTGNALS 167
Query: 1680 ITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANL 1727
+ S L + + + +G + +
Sbjct: 168 PLDP------ETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTV 209
Score = 29.8 bits (66), Expect = 7.8
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 19/70 (27%)
Query: 6 DPNLKIEWFKNG-----------------VPLSLGSRIRSTFDF--GLVTLSINSLRADD 46
P L + WF++G V R R D +LSI R +D
Sbjct: 34 SPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDARMED 93
Query: 47 SAIYTCKATN 56
+ Y +
Sbjct: 94 TGSYFFRVER 103
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase,
glycoprotein, receptor protei tyrosine phosphatase, cell
adhesion; HET: NAG; 3.10A {Homo sapiens}
Length = 731
Score = 52.9 bits (126), Expect = 1e-06
Identities = 27/187 (14%), Positives = 47/187 (25%), Gaps = 20/187 (10%)
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV-FAVIAENRGG 1719
V+ + PL W P + ++ L + + V F VI G
Sbjct: 98 VKVNNGPLGNPIWNISGDPTRTW---------NRAELAISTFWPNFYQVIFEVITSGHQG 148
Query: 1720 KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKN 1779
V+ I + +N GQ A F
Sbjct: 149 YLAIDEVKVLGHPCT-------RTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQ 201
Query: 1780 GKKIIPDIRYK---TLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKK 1836
G + + T + + ++ D+G Y C+ G +V +
Sbjct: 202 GIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEP 261
Query: 1837 APGKQAP 1843
P
Sbjct: 262 PVPIAPP 268
Score = 49.0 bits (116), Expect = 2e-05
Identities = 23/186 (12%), Positives = 56/186 (30%), Gaps = 18/186 (9%)
Query: 1585 RVTGYPRPRVMWLINGHTIVNEIVRKITATETTE-----------MEHKGKIQERVVDAS 1633
+V P +W I+G ++ + H+G + V
Sbjct: 99 KVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVL 158
Query: 1634 EKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 1693
P +IQ A F+ G + + + + + +P +I S+
Sbjct: 159 GHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSS 218
Query: 1694 K---SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTIS 1750
+ + + D+G + + GG + +V ++ L ++
Sbjct: 219 RRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQ----LASVG 274
Query: 1751 SAVINV 1756
+ + +
Sbjct: 275 ATYLWI 280
Score = 47.5 bits (112), Expect = 4e-05
Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 2/107 (1%)
Query: 919 FLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI-LE 977
++ + A F+C + + IK + F+
Sbjct: 167 HFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFN 226
Query: 978 INDVYLRDSGLYTCKATNKHGEATTSC-KLTVKGRQGIDVEPQVSAI 1023
+ + RD+G Y C + G ++ +L VK PQ++++
Sbjct: 227 VVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASV 273
Score = 47.1 bits (111), Expect = 6e-05
Identities = 28/160 (17%), Positives = 50/160 (31%), Gaps = 12/160 (7%)
Query: 437 NDPELKVEWFHNGKPIFHKNRVKMV---SDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFI 493
N P W +G P NR ++ F + + S G +
Sbjct: 102 NGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDE-VKVLGH 160
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P F +I+ N++V F C ++ R+ A +
Sbjct: 161 PCTRTPHFLRIQ-------NVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEI 213
Query: 554 KTVYDFGFIS-LDMDYVYARDSGEYICRATNKWGTAMTKA 592
K FI+ ++ RD+G+Y C + G ++
Sbjct: 214 KVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNY 253
Score = 45.2 bits (106), Expect = 2e-04
Identities = 10/84 (11%), Positives = 25/84 (29%), Gaps = 1/84 (1%)
Query: 718 DLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVI-LEISPVYPED 776
++ G+ A F+ ++ + F+ + D
Sbjct: 175 EVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRD 234
Query: 777 CGQYSCRAYNDYGEAVTSASMKVQ 800
G+Y C + G +++ + V
Sbjct: 235 AGKYRCMIRTEGGVGISNYAELVV 258
Score = 43.6 bits (102), Expect = 7e-04
Identities = 18/129 (13%), Positives = 35/129 (27%), Gaps = 7/129 (5%)
Query: 1396 IQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDP 1455
+ E + YL D++ ++ Q F+C +G
Sbjct: 137 VIFEVITSGHQG--YLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCS--AIGRT 192
Query: 1456 NMKVEWFL---NGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETR 1512
+L + + P K + N D+G+Y C G+ +
Sbjct: 193 VAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISN 252
Query: 1513 AILKTTGKP 1521
+P
Sbjct: 253 YAELVVKEP 261
Score = 41.3 bits (96), Expect = 0.003
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 1/93 (1%)
Query: 1051 PNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 1110
P N++V F C ++ R+ A +K
Sbjct: 161 PCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR 220
Query: 1111 FIS-LDMDYVYARDSGEYICRATNKWGTAMTKA 1142
FI+ ++ RD+G+Y C + G ++
Sbjct: 221 FIASFNVVNTTKRDAGKYRCMIRTEGGVGISNY 253
Score = 40.1 bits (93), Expect = 0.007
Identities = 8/58 (13%), Positives = 20/58 (34%)
Query: 605 WFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKCV 662
+ + P T I +++ + ++G Y C + G ++ + V
Sbjct: 201 QGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 258
Score = 38.6 bits (89), Expect = 0.025
Identities = 16/147 (10%), Positives = 35/147 (23%), Gaps = 9/147 (6%)
Query: 265 LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGE 324
L I + + T+ + ++ + ++ G+
Sbjct: 125 LAISTFWPNFYQVIFEVITSGHQGYLAIDEV----KVLGHPCTRTPHFLRIQNVEVNAGQ 180
Query: 325 IAHFEASLIPVGDQTMTVEFLYNGKPIE---ASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
A F+ +G G + T + ++ T D G Y
Sbjct: 181 FATFQC--SAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKY 238
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQP 408
C + G + V +
Sbjct: 239 RCMIRTEGGVGISNYAELVVKEPPVPI 265
Score = 38.2 bits (88), Expect = 0.030
Identities = 9/70 (12%), Positives = 20/70 (28%), Gaps = 1/70 (1%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVT-LSINSLRADDSAIYTCKATNLLG 59
R ++ V + I+ T + ++ + D+ Y C G
Sbjct: 188 AIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGG 247
Query: 60 EAVSTCTLKI 69
+S +
Sbjct: 248 VGISNYAELV 257
Score = 37.1 bits (85), Expect = 0.075
Identities = 13/97 (13%), Positives = 31/97 (31%), Gaps = 1/97 (1%)
Query: 759 FCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVF 818
F+ ++ V + C A + + + + E ++ F
Sbjct: 163 TRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRR-F 221
Query: 819 ISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
I+ + D G+Y C + G +++ + V
Sbjct: 222 IASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 258
Score = 36.7 bits (84), Expect = 0.084
Identities = 18/154 (11%), Positives = 34/154 (22%), Gaps = 11/154 (7%)
Query: 153 NDPELKVEWFHNGKPIFHKNRVKMV---SDFGFVVMDIAYVQSHDSGEYVCQWFVNNKPL 209
N P W +G P NR ++ F + + S G
Sbjct: 102 NGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHP 161
Query: 210 PAGAKFKTTHDFGYVALDIELMLK--------TLVPFTEWFVNNKPLPAGAKFKTTHDFG 261
V + ++ + P T+
Sbjct: 162 CTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRF 221
Query: 262 YVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
+ ++V D+G Y G ++
Sbjct: 222 IASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAE 255
Score = 35.1 bits (80), Expect = 0.23
Identities = 20/162 (12%), Positives = 40/162 (24%), Gaps = 18/162 (11%)
Query: 1249 NYTPEEIEEDEIPEEPPRFITEIESVTVQEAEPVRFETRVEPRVDPRLRVECSLSTAFFF 1308
+E++ P I++V V + F+ R
Sbjct: 149 YLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGR----------------- 191
Query: 1309 PFINISTAFLIFNFCLHAVIFSHPIFDLGFVS-LDIDYVYPEDQGEYVCRAYNDHGEAFT 1367
+ + F++ ++ D G+Y C + G +
Sbjct: 192 TVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGIS 251
Query: 1368 KATISCKKIPTIQLQNQVPKGMLKTEALIQMEAAIKKYTSEI 1409
K P + + + T IQ+ A I
Sbjct: 252 NYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPI 293
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal
regulatory protein alpha, immunoglobulin superfamily,
phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Length = 327
Score = 51.9 bits (124), Expect = 1e-06
Identities = 31/239 (12%), Positives = 69/239 (28%), Gaps = 13/239 (5%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
+ I D G Y C K + + S P +
Sbjct: 76 ISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTV 135
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYV-----QSHDSGEY 482
F C + ++ ++WF NG + + + +
Sbjct: 136 SFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQV 195
Query: 483 VCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNL---DVPEAGKVHFDCRLEPKSDPTMRID 539
+C + + P + P + V +V+ C++ +++
Sbjct: 196 ICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQPVRAENQVNVTCQVRKFYPQRLQLT 255
Query: 540 WFFNGRPFATGSRVKTVYD----FGFIS-LDMDYVYARDSGEYICRATNKWGTAMTKAK 593
W NG T + + + ++S L ++ RD + C+ + A++K+
Sbjct: 256 WLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSH 314
Score = 48.0 bits (114), Expect = 2e-05
Identities = 29/222 (13%), Positives = 62/222 (27%), Gaps = 14/222 (6%)
Query: 240 EWFVNNKPLPAG----AKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
E N K T + ++ I D+G Y KGS T
Sbjct: 47 ELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYC-VKFRKGSPDTEFKS 105
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASH 355
L V P + + + F + +T+++ NG +
Sbjct: 106 GAGTELSVRAK-PSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQ 164
Query: 356 RIRTVHAFGMV-----VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPK 410
+ +++ T+ + C + Q + + S+
Sbjct: 165 TNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLR--GTANLSETIRVP 222
Query: 411 FTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
T + + + ++ + + C + L++ W NG
Sbjct: 223 PTLEV-TQQPVRAENQVNVTCQVRKFYPQRLQLTWLENGNVS 263
Score = 36.8 bits (85), Expect = 0.051
Identities = 7/45 (15%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Query: 12 EWFKNGVPLSLGSRIRSTF----DFGLVTLSINSLRADDSAIYTC 52
E N + + ++SI+++ D+ Y C
Sbjct: 47 ELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYC 91
Score = 29.5 bits (66), Expect = 10.0
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFD----FGLV-TLSINSLRADDSAIYTCKATN-LLGEA 61
L++ W +NG + T + + + L +N D TC+ +
Sbjct: 251 RLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAV 310
Query: 62 VSTCTLKIEDRH 73
+ LK+ RH
Sbjct: 311 SKSHDLKVSTRH 322
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor,
adhesion, structural genomics, NEW YORK STR genomics
research consortium, nysgrc; 1.70A {Homo sapiens} PDB:
3rq3_A 3udw_A* 3ucr_A
Length = 117
Score = 47.6 bits (113), Expect = 2e-06
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 17/103 (16%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA-------------GSRIK 966
+ T +++ + +C L+ T V W + L+ R+
Sbjct: 7 IETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVA 66
Query: 967 TINDFGFVILEINDVYLRDSGLYTCK-ATNKHGEATTSCKLTV 1008
G L + + + D+G Y C T G T L V
Sbjct: 67 PGPGLG---LTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEV 106
Score = 41.8 bits (98), Expect = 2e-04
Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 16/75 (21%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI--FH-----------KNRVKMVSDFGFVVMD 470
G S +C L+ +V W + + + K+RV G +
Sbjct: 18 GGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQS 77
Query: 471 IAYVQSHDSGEYVCR 485
+ +D+GEY C
Sbjct: 78 ---LTVNDTGEYFCI 89
Score = 39.9 bits (93), Expect = 0.001
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 21/94 (22%)
Query: 131 RVEPSKDATMKIGK---LLCTLTPVNDPELKVEWFHNGKPI--FH-----------KNRV 174
+E + + + + G L C L+ +V W + + + K+RV
Sbjct: 6 TIETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRV 65
Query: 175 KMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKP 208
G + + +D+GEY C + P
Sbjct: 66 APGPGLGLTLQS---LTVNDTGEYFCI--YHTYP 94
Score = 37.2 bits (86), Expect = 0.008
Identities = 17/107 (15%), Positives = 34/107 (31%), Gaps = 18/107 (16%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT-----GSRVKTVYDFGFISL 564
+ N+ + G + C L + +++W + A G + + ++
Sbjct: 9 TTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFK-DRVAP 67
Query: 565 DMDY------VYARDSGEYICR-ATNKWGTAMTKAKVICKVLTVIVE 604
+ D+GEY C T GT + L V+
Sbjct: 68 GPGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIF-----LEVLES 109
Score = 36.8 bits (85), Expect = 0.012
Identities = 19/95 (20%), Positives = 28/95 (29%), Gaps = 17/95 (17%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPL-------------PHKNRFNPIYDFGYVAMNF 1487
S +C L+ +V W + L K+R P G +
Sbjct: 19 GSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQS- 77
Query: 1488 GWVYPEDSGEYLCR-ATNLYGMDETRAILKTTGKP 1521
+ D+GEY C T G R L+
Sbjct: 78 --LTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESS 110
Score = 36.0 bits (83), Expect = 0.020
Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 1059 QLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT-----GSRVKTVYDFGFIS 1113
+ N+ + G + C L + +++W + A G + + ++
Sbjct: 8 ETTGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFK-DRVA 66
Query: 1114 LDMDY------VYARDSGEYICR-ATNKWGTAMTKAKV 1144
+ D+GEY C T GT + +
Sbjct: 67 PGPGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFL 104
Score = 35.3 bits (81), Expect = 0.041
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 11/75 (14%)
Query: 6 DPNLKIEWFKNGVPLSL-----GSRIRSTFD-----FGLVTLSINSLRADDSAIYTCK-A 54
++ W + L++ G I +F + L++ SL +D+ Y C
Sbjct: 32 AQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFCIYH 91
Query: 55 TNLLGEAVSTCTLKI 69
T G L++
Sbjct: 92 TYPDGTYTGRIFLEV 106
Score = 34.5 bits (79), Expect = 0.078
Identities = 13/68 (19%), Positives = 19/68 (27%), Gaps = 2/68 (2%)
Query: 1769 TKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYEC-VAMNNAGEARCE 1827
+ L + G I P + + L + V D+G Y C G
Sbjct: 43 DQLLAICNADLGWHISPSFKDRVAPGPG-LGLTLQSLTVNDTGEYFCIYHTYPDGTYTGR 101
Query: 1828 AELVVQSK 1835
L V
Sbjct: 102 IFLEVLES 109
Score = 34.1 bits (78), Expect = 0.086
Identities = 14/94 (14%), Positives = 30/94 (31%), Gaps = 17/94 (18%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKT-------------GSRFRTFCDFGFVI 766
+G + + L+ T +V W + + R G
Sbjct: 16 EKGGSIILQCHLSSTTAQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLG--- 72
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L + + D G+Y C Y+ Y + + + ++
Sbjct: 73 LTLQSLTVNDTGEYFCI-YHTYPDGTYTGRIFLE 105
Score = 33.7 bits (77), Expect = 0.12
Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCR-ATNKWGQAEIS 395
DQ + + G I S + R V + L + + DTG Y C T G
Sbjct: 43 DQLLAICNADLGWHISPSFKDR-VAPGPGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGR 101
Query: 396 VNLECVDKSKGQ 407
+ LE ++ S +
Sbjct: 102 IFLEVLESSVAE 113
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein,
immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG;
2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB:
1p9m_C 2arw_A
Length = 325
Score = 49.1 bits (116), Expect = 7e-06
Identities = 24/116 (20%), Positives = 34/116 (29%), Gaps = 10/116 (8%)
Query: 916 APEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI 975
P LT C + + TV W A +
Sbjct: 6 CPAQEVARGVLTSLPGDSVTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGMG---RR 61
Query: 976 LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSAIFANATKNI 1031
L + V L DSG Y+C + G + L V EPQ+S + N+
Sbjct: 62 LLLRSVQLHDSGNYSC---YRAGRPAGTVHLLV---DVPPEEPQLSCFRKSPLSNV 111
Score = 40.2 bits (93), Expect = 0.005
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 6/67 (8%)
Query: 5 ADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
+ N + W + L + S++ DS Y+C G T
Sbjct: 33 PEDNATVHWVLRKPAAGSHPSRWAGMG---RRLLLRSVQLHDSGNYSCYRA---GRPAGT 86
Query: 65 CTLKIED 71
L ++
Sbjct: 87 VHLLVDV 93
Score = 39.8 bits (92), Expect = 0.007
Identities = 15/97 (15%), Positives = 24/97 (24%), Gaps = 8/97 (8%)
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
R+ P V + G++ + V W +
Sbjct: 4 RRCPAQEVARGVLTS-LPGDSVTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGMG-- 59
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
L + V D G YSC G + + V
Sbjct: 60 -RRLLLRSVQLHDSGNYSCYR---AGRPAGTVHLLVD 92
Score = 39.1 bits (90), Expect = 0.012
Identities = 8/59 (13%), Positives = 13/59 (22%), Gaps = 1/59 (1%)
Query: 1559 PKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWLINGHTIVNEIVRKITATET 1616
P+ P G+ C V V W++ + R
Sbjct: 3 PRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAAGSHPSRWAGMGRR 61
Score = 37.5 bits (86), Expect = 0.038
Identities = 23/215 (10%), Positives = 56/215 (26%), Gaps = 38/215 (17%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK-WGQAEI 394
+ TV ++ + L + ++ D+G Y+C + G +
Sbjct: 33 PEDNATVHWVLRKPAAGSHPSRWAGM---GRRLLLRSVQLHDSGNYSCYRAGRPAGTVHL 89
Query: 395 SVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVE---WFHNGKP 451
V PP L + ++ C P + P L + +
Sbjct: 90 LV---------DVPP----EEPQLSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQN 136
Query: 452 IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQ 511
++ + S +S ++ C+ + + + + S
Sbjct: 137 SPAEDFQEPCQY------------SQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKFS 184
Query: 512 DNLDVPEAGKVHFD------CRLEPKSDPTMRIDW 540
G + D ++ + + W
Sbjct: 185 KTQTFQGCGILQPDPPANITVTAVARNPRWLSVTW 219
Score = 36.8 bits (84), Expect = 0.056
Identities = 13/75 (17%), Positives = 20/75 (26%), Gaps = 6/75 (8%)
Query: 1766 ISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEAR 1825
+ V+W+ LL+ + DSG Y C AG
Sbjct: 31 VEPEDNATVHWVLRKPAAGSHPSRWAGMGR---RLLLRSVQLHDSGNYSCYR---AGRPA 84
Query: 1826 CEAELVVQSKKAPGK 1840
L+V +
Sbjct: 85 GTVHLLVDVPPEEPQ 99
Score = 36.4 bits (83), Expect = 0.088
Identities = 17/104 (16%), Positives = 24/104 (23%), Gaps = 14/104 (13%)
Query: 1419 PEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIY 1478
P ++ +T + S C + N V W L
Sbjct: 7 PAQEVARGVLT-------SLPGDSVTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGM 58
Query: 1479 DFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPG 1522
+ + V DSG Y C G L P
Sbjct: 59 GRRLLLRS---VQLHDSGNYSCYRA---GRPAGTVHLLVDVPPE 96
Score = 34.5 bits (78), Expect = 0.32
Identities = 14/71 (19%), Positives = 17/71 (23%), Gaps = 7/71 (9%)
Query: 134 PSKDATMKIG---KLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYV 190
T G L C + V W + + V
Sbjct: 12 ARGVLTSLPGDSVTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGMGRRLL---LRSV 67
Query: 191 QSHDSGEYVCQ 201
Q HDSG Y C
Sbjct: 68 QLHDSGNYSCY 78
Score = 33.7 bits (76), Expect = 0.56
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 6/68 (8%)
Query: 1664 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 1723
+ + T+ W S L++R V + DSG ++ G+
Sbjct: 32 EPEDNATVHWVLRKPAAGSH---PSRWAGMGRRLLLRSVQLHDSGNYSCYR---AGRPAG 85
Query: 1724 SANLVVEE 1731
+ +L+V+
Sbjct: 86 TVHLLVDV 93
Score = 32.1 bits (72), Expect = 1.6
Identities = 11/75 (14%), Positives = 19/75 (25%), Gaps = 4/75 (5%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYV 569
++ L V C + + + W + L + V
Sbjct: 12 ARGVLTSLPGDSVTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGMG---RRLLLRSV 67
Query: 570 YARDSGEYICRATNK 584
DSG Y C +
Sbjct: 68 QLHDSGNYSCYRAGR 82
Score = 31.8 bits (71), Expect = 2.3
Identities = 10/63 (15%), Positives = 16/63 (25%), Gaps = 4/63 (6%)
Query: 1072 VHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 1131
V C + + + W + L + V DSG Y C
Sbjct: 24 VTLTCP-GVEPEDNATVHWVLRKPAAGSHPSRWAGMG---RRLLLRSVQLHDSGNYSCYR 79
Query: 1132 TNK 1134
+
Sbjct: 80 AGR 82
Score = 30.2 bits (67), Expect = 5.9
Identities = 11/73 (15%), Positives = 19/73 (26%), Gaps = 11/73 (15%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT------- 655
V W +++ + +SG Y C + V
Sbjct: 39 VHWVLRKPAAGSHPSRWAGMGRRLLLRSV---QLHDSGNYSCYRAGRPAGTVHLLVDVPP 95
Query: 656 -KASLKCVSKTNL 667
+ L C K+ L
Sbjct: 96 EEPQLSCFRKSPL 108
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily.,
cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Length = 231
Score = 47.5 bits (112), Expect = 1e-05
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 17/133 (12%)
Query: 368 LEILGTKIEDTGVYTCRA-TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
L + ++ D Y C G AE + L +K + + + + +L ++D
Sbjct: 79 LVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVF--AKPEATEVSPNKGTLSVMEDSAQ 136
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-------------IAY 473
C N P K+ W+ NG+ + + + +
Sbjct: 137 EIATCNSRNGN-PAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRL 195
Query: 474 VQSHDSGEYVCRA 486
+ + C A
Sbjct: 196 RKDDRDASFHCAA 208
Score = 40.9 bits (95), Expect = 0.002
Identities = 31/205 (15%), Positives = 51/205 (24%), Gaps = 54/205 (26%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKP----------------IFHKNRVKMVSDFGFV 467
G S +CT T +EWF + + + S +
Sbjct: 15 GKSVILDCTPTG-THDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQL 73
Query: 468 VMD----IAYVQSHDSGEYVCRAWNN-----------FIFIPPFPIFIFHQIRLPSPSQD 512
+A Q D +YVC +F P + SP++
Sbjct: 74 DSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEV-------SPNKG 126
Query: 513 NLDVPEAGKVH-FDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT-VYDFGFISLDMDYVY 570
L V E C +P +I W+ NG+ + Y + +
Sbjct: 127 TLSVMEDSAQEIATCNSR-NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLL 185
Query: 571 ------------ARDSGEYICRATN 583
+ C A
Sbjct: 186 SLTSTLYLRLRKDDRDASFHCAAHY 210
Score = 40.6 bits (94), Expect = 0.003
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 17/94 (18%)
Query: 1792 LEEDNLFTLLIIEAVVEDSGAYEC-VAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVA 1850
+ D+ L++ EA V D Y C V AG A A L V +K P A
Sbjct: 71 YQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK---------PEATEV 121
Query: 1851 QDEAPTVAEPLKDQNVKEGSAVTLKCRIT-GKPR 1883
T++ +++ + C G P
Sbjct: 122 SPNKGTLSV------MEDSAQEIATCNSRNGNPA 149
Score = 40.2 bits (93), Expect = 0.003
Identities = 30/210 (14%), Positives = 54/210 (25%), Gaps = 64/210 (30%)
Query: 1433 TQDQLVEM---QSTKFECQLAPVGDPNMKVEWFLNGKP------LPHKNRFNPIYDFGYV 1483
+ LVE+ +S +C D M +EWFL + + + + + +
Sbjct: 5 SVPPLVEVMRGKSVILDCTPTGTHDHYM-LEWFLTDRSGARPRLASAEMQGSELQVTMHD 63
Query: 1484 AMNFGWVY--------------PEDSGEYLCRA-TNLYGMDETRAILKTTGKPGIIYESQ 1528
Y D +Y+C G E A L KP
Sbjct: 64 TRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKP------- 116
Query: 1529 LPKGMKSIEKIREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVT 1587
+ V ++ +++ C
Sbjct: 117 -------------------------------EATEVSPNKGTLSVMEDSAQEIATCNSRN 145
Query: 1588 GYPRPRVMWLINGHTIVNEIVRKITATETT 1617
G P P++ W NG + + T+
Sbjct: 146 GNPAPKITWYRNGQRLEVPVEMNPEGYMTS 175
Score = 39.8 bits (92), Expect = 0.005
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 13/67 (19%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDF---------GLVT----LSINSLRADDSAIYTCK 53
P KI W++NG L + + GL++ L + + D A + C
Sbjct: 148 PAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCA 207
Query: 54 ATNLLGE 60
A L E
Sbjct: 208 AHYSLPE 214
Score = 38.2 bits (88), Expect = 0.014
Identities = 27/206 (13%), Positives = 56/206 (27%), Gaps = 38/206 (18%)
Query: 1648 PCRAFEQDQAR----FEVEFDGDPLPTIKWFREDFPITSSPD-----FQIHTFSTKSILI 1698
C F + G + + + + ++ L+
Sbjct: 21 DCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLV 80
Query: 1699 MRQVFMEDSGVFA-VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI----SSAV 1753
+ + + D + V+ G A+ +A L V P + +V
Sbjct: 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNV----------FAKPEATEVSPNKGTLSV 130
Query: 1754 INVGQLARFDAKISATKPL-DVYWLKNGKKIIPDIRYK---------TLEEDNLFTL--- 1800
+ P + W +NG+++ + E L +L
Sbjct: 131 MEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTST 190
Query: 1801 LIIEAVVEDSGA-YECVAMNNAGEAR 1825
L + +D A + C A + E R
Sbjct: 191 LYLRLRKDDRDASFHCAAHYSLPEGR 216
Score = 37.5 bits (86), Expect = 0.028
Identities = 31/248 (12%), Positives = 60/248 (24%), Gaps = 75/248 (30%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSA---------GSRIKTIND 970
L+ P + + +C T T+D M +EWF ++ + GS ++
Sbjct: 4 LSVPPLVEVMRGKSVILDCTPTGTHDHYM-LEWFLTDRSGARPRLASAEMQGSELQVTMH 62
Query: 971 FGFVI-----------LEINDVYLRDSGLYTCKA-TNKHGEATTSCKLTVKGRQGIDVEP 1018
L + + + D Y C G A + +L V
Sbjct: 63 DTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFA-------- 114
Query: 1019 QVSAIFANATKNIQKLEEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRL 1078
KP + + ++ + C
Sbjct: 115 -------------------------------KPEATEVSPNKGTLSVMEDSAQEIATCNS 143
Query: 1079 EPKSDPTMRIDWFFNGRPFATGSRVKT-VYDFGFISLDMDYVY------------ARDSG 1125
+P +I W+ NG+ + Y + +
Sbjct: 144 R-NGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDA 202
Query: 1126 EYICRATN 1133
+ C A
Sbjct: 203 SFHCAAHY 210
Score = 36.7 bits (84), Expect = 0.048
Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 31/145 (21%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFW---NGKPMKTGSRFRTFCDFGFVI---------- 766
G++ + T T D + +EWF +G + S + +
Sbjct: 13 MRGKSVILDCTPTGTHDHYM-LEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPY 71
Query: 767 -------LEISPVYPEDCGQYSCRAY-NDYGEAVTSASMKVQGKRSIILESQLPKGMEVF 818
L ++ D Y C G A +A + V K P+ EV
Sbjct: 72 QLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK---------PEATEVS 122
Query: 819 ISFHEISPVYPEDCGQYSCRAYNDY 843
+ +S + +C + N
Sbjct: 123 PNKGTLSVMEDSAQEIATCNSRNGN 147
Score = 34.8 bits (79), Expect = 0.16
Identities = 20/137 (14%), Positives = 31/137 (22%), Gaps = 45/137 (32%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPTIQLQNQVPKGMLKTEALIQME 1399
L + D+ +YVC T +L
Sbjct: 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEA---------TARLNVFAK------------- 115
Query: 1400 AAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKV 1459
PE T + + C + G+P K+
Sbjct: 116 -------------------PE---ATEVSPNKGTLSVMEDSAQEIATC-NSRNGNPAPKI 152
Query: 1460 EWFLNGKPLPHKNRFNP 1476
W+ NG+ L NP
Sbjct: 153 TWYRNGQRLEVPVEMNP 169
Score = 34.0 bits (77), Expect = 0.33
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 15/111 (13%)
Query: 1635 KPAKPPVFTKKIQPCRAFEQDQARFE-VEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 1693
KP V K + Q +G+P P I W+R + + + T
Sbjct: 115 KPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMT 174
Query: 1694 KSILIMRQVFMEDSGVFAVIA--------ENRGGKAKCSANLVVEEKRQGG 1736
+ E SG+ ++ + ++R C+A+ + E R G
Sbjct: 175 SRTV------REASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGR 219
Score = 31.7 bits (71), Expect = 1.7
Identities = 20/192 (10%), Positives = 39/192 (20%), Gaps = 67/192 (34%)
Query: 36 TLSINSLRADDSAIYTCKA-TNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKP 94
L + + D Y C G A +T L + + +
Sbjct: 78 RLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNV----------FAKPEATEVSPNKGT 127
Query: 95 KEVRKDEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVND 154
V +D + + C
Sbjct: 128 LSVMEDSAQEI----------------------ATCNSRNGN------------------ 147
Query: 155 PELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD-------------IAYVQSHDSGEYVCQ 201
P K+ W+ NG+ + + + + + + C
Sbjct: 148 PAPKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCA 207
Query: 202 WFVNNKPLPAGA 213
+ LP G
Sbjct: 208 --AHY-SLPEGR 216
Score = 31.3 bits (70), Expect = 2.6
Identities = 22/121 (18%), Positives = 31/121 (25%), Gaps = 27/121 (22%)
Query: 503 QIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTM-------------RIDWFFNGRPFAT 549
++RL P ++V V DC D M R+
Sbjct: 1 EVRLSVPP--LVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQ 58
Query: 550 GSRVKTVYDFGFISLDMDY------VYARDSGEYICRA-TNKWGTAMTKAKVICKVLTVI 602
+ T LD D +Y+C GTA A+ L V
Sbjct: 59 VTMHDTRGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATAR-----LNVF 113
Query: 603 V 603
Sbjct: 114 A 114
Score = 30.2 bits (67), Expect = 6.2
Identities = 28/192 (14%), Positives = 53/192 (27%), Gaps = 35/192 (18%)
Query: 117 DVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIFHKNRVKM 176
VE ++V DC + D M L LT + ++
Sbjct: 9 LVEVMRGKSVILDCTPTGTHDHYM----LEWFLTDRSGARPRLASAEMQGSELQVTMHDT 64
Query: 177 VSDFGFVVMD------IAYVQSHDSGEYVCQ-WFVNNKPLPAGAKFK---------TTHD 220
+D +A Q D +YVC A A+ + +
Sbjct: 65 RGRSPPYQLDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPN 124
Query: 221 FGYVALDIELMLKTLV---------PFTEWFVNNKPLPAGAKFKTTHDFGYVALDIVGAY 271
G +++ + + P W+ N + L + +
Sbjct: 125 KGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNPEGYMTSRTVR----- 179
Query: 272 AEDSGIYTVKAT 283
E SG+ ++ +T
Sbjct: 180 -EASGLLSLTST 190
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold,
natural killer cell receptor, immune SY; HET: NAG; 1.80A
{Homo sapiens} PDB: 1im9_D
Length = 316
Score = 47.9 bits (114), Expect = 1e-05
Identities = 35/223 (15%), Positives = 52/223 (23%), Gaps = 20/223 (8%)
Query: 370 ILGTKIEDTGVYTCRATNKWGQAEISVN---LECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
+ G YTCR ++ S + + + P +H L +K G+
Sbjct: 78 MSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL--VKSGER 135
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM-DIAYVQSHDSGEYVCR 485
+C + + G V + D I + +G Y C
Sbjct: 136 VILQCWSDIMFE---HFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCY 192
Query: 486 AWNNFIFI------PPFPIFIFHQIRLPSPS-QDNLDVPEAGKVHFDCRLEPKSDPTMRI 538
P I + PS S Q V V C
Sbjct: 193 GSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR---SSYDMY 249
Query: 539 DWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRA 581
G + F D A G Y C
Sbjct: 250 HLSREGGAHERRLPAVRKVNRTF-QADFPLGPATHGGTYRCFG 291
Score = 46.4 bits (110), Expect = 5e-05
Identities = 34/226 (15%), Positives = 62/226 (27%), Gaps = 12/226 (5%)
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIA 326
+ +G YT + ++ S + + V N+ SL + GE
Sbjct: 78 MSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVV-IMVTGNHRKPSLLAHPGPLVKSGE-- 134
Query: 327 HFEASLIPVGDQTMTVEFLY-NGKPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCR 384
L D FL+ G + S + +H I + G Y C
Sbjct: 135 --RVILQCWSDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCY 192
Query: 385 ATNKWGQAEISVNLECVDKS-KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKV 443
+ ++S + +D G K + + ++ G+S C+
Sbjct: 193 GSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSR---SSYDMY 249
Query: 444 EWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
G + + F D + G Y C
Sbjct: 250 HLSREGGAHERRLPAVRKVNRTFQA-DFPLGPATHGGTYRCFGSFR 294
Score = 37.9 bits (88), Expect = 0.026
Identities = 18/162 (11%), Positives = 28/162 (17%), Gaps = 44/162 (27%)
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF-VILEISPVYPEDCGQYSCRAYNDYGEAV 792
+D G D I P+ G Y C +
Sbjct: 142 SDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQ 201
Query: 793 TSA----------SMKVQGKRSIILESQLPKGMEV---------FISFH----------- 822
SA + S ++ G V + +H
Sbjct: 202 LSAPSDPLDIVVTGPYEKPSLSAQPGPKVQAGESVTLSCSSRSSYDMYHLSREGGAHERR 261
Query: 823 -------------EISPVYPEDCGQYSCRAYNDYGEAVTSAS 851
+ G Y C + S
Sbjct: 262 LPAVRKVNRTFQADFPLGPATHGGTYRCFGSFRHSPYEWSDP 303
Score = 36.4 bits (84), Expect = 0.068
Identities = 24/162 (14%), Positives = 33/162 (20%), Gaps = 49/162 (30%)
Query: 734 TDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVT 793
+ + R F +SPV G Y+CR + +
Sbjct: 47 YRHRFNNFMLYKEDRIHIPIFHGRIF----QESFNMSPVTTAHAGNYTCRGSHPHSPTGW 102
Query: 794 SASMK-----VQGKR-----SIILESQLPKGMEV---------FISFH------------ 822
SA V G + G V F F
Sbjct: 103 SAPSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSR 162
Query: 823 --------------EISPVYPEDCGQYSCRAYNDYGEAVTSA 850
I P+ G Y C + SA
Sbjct: 163 LVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSA 204
Score = 34.9 bits (80), Expect = 0.21
Identities = 30/225 (13%), Positives = 53/225 (23%), Gaps = 45/225 (20%)
Query: 1666 DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 1725
++ED H + M V +G + + SA
Sbjct: 49 HRFNNFMLYKEDRIHIP----IFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSA 104
Query: 1726 -----NLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARF--DAKISATKPLDVYWLK 1778
++V L ++ G+ + I + K
Sbjct: 105 PSNPVVIMVTG--------NHRKPSLLAHPGPLVKSGERVILQCWSDIMFEH---FFLHK 153
Query: 1779 NGKKIIPDIRYKTLEEDNLFTLLIIEAV-VEDSGAYECVAMNNAGEARCEA-----ELVV 1832
G P + + I + + +G Y C + A ++VV
Sbjct: 154 EGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVV 213
Query: 1833 QSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
+ PG V G +VTL C
Sbjct: 214 TGPYEKPSLSAQPGPKVQ-----------------AGESVTLSCS 241
Score = 34.9 bits (80), Expect = 0.24
Identities = 16/132 (12%), Positives = 32/132 (24%), Gaps = 27/132 (20%)
Query: 471 IAYVQSHDSGEYVCRAWNNFIF---------------IPPFPIFIFHQIRLPSPSQDNLD 515
++ V + +G Y CR + + P P
Sbjct: 78 MSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAH---PGPL----- 129
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGF-ISLDMDYVYARDS 574
V +V C + + G V ++D + + + +
Sbjct: 130 VKSGERVILQCWSDIMFE---HFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALA 186
Query: 575 GEYICRATNKWG 586
G Y C +
Sbjct: 187 GTYRCYGSVTHT 198
Score = 31.8 bits (72), Expect = 2.0
Identities = 11/67 (16%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Query: 938 CRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF-VILEINDVYLRDSGLYTCKATNK 996
C ++ G + + I+D I + L +G Y C +
Sbjct: 140 CW---SDIMFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVT 196
Query: 997 HGEATTS 1003
H S
Sbjct: 197 HTPYQLS 203
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative
splicing, cell adhesion, cell membrane, glycoprotein,
HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R
3epc_R* 3epd_R* 3epf_R*
Length = 221
Score = 46.2 bits (109), Expect = 3e-05
Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 16/162 (9%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAF-----GMVVLEILGTKIEDTGVYTCR-ATNKW 389
+M V G S R+ V A L + G ++ED G YTC T
Sbjct: 43 ESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQ 102
Query: 390 GQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNG 449
G + + L + P+ T+ ++ ++ L C T P ++ W +
Sbjct: 103 GSRSVDIWLRVLA-----KPQNTAEVQKVQ-LTGEPVPMARCVSTGGR-PPAQITWHSDL 155
Query: 450 KPIFHKNRVKMVSDFGFVVMDIAYV---QSHDSGEYVCRAWN 488
+ ++V V + + D + C+ +
Sbjct: 156 GGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEH 197
Score = 38.1 bits (88), Expect = 0.013
Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 26/125 (20%)
Query: 1765 KISATKPLDVYWLKNGKKIIPDIRYKTL-----EEDNLFTLLIIEAVVEDSGAYEC-VAM 1818
+ + + V+ G R + + E +L + VED G+Y C
Sbjct: 40 RHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVT 99
Query: 1819 NNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRI 1878
G + L V +K P ++ + +C
Sbjct: 100 FPQGSRSVDIWLRVLAK-------------------PQNTAEVQKVQLTGEPVPMARCVS 140
Query: 1879 TG-KP 1882
TG +P
Sbjct: 141 TGGRP 145
Score = 36.2 bits (83), Expect = 0.059
Identities = 23/126 (18%), Positives = 35/126 (27%), Gaps = 28/126 (22%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPS---MTVEWFHNGK-------ALSAGSRIKTIN 969
+ PT + C L N + W +G+ + G
Sbjct: 3 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 62
Query: 970 DFGFVI-----------LEINDVYLRDSGLYTCK-ATNKHGEATTSCKLTVKGRQGIDVE 1017
FV L + + + D G YTC T G + L V +
Sbjct: 63 RLEFVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVL------AK 116
Query: 1018 PQVSAI 1023
PQ +A
Sbjct: 117 PQNTAE 122
Score = 35.8 bits (82), Expect = 0.084
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVT----LSINSLRADDSAIYTCKATN 56
P +I W + + S++ G VT + D TCK +
Sbjct: 145 PPAQITWHSDLGGMPQTSQVPGFLS-GTVTVTSLWILVPSSQVDGKQVTCKVEH 197
Score = 34.3 bits (78), Expect = 0.27
Identities = 24/230 (10%), Positives = 49/230 (21%), Gaps = 76/230 (33%)
Query: 2 EPRADPNLKIEWFKNGVPLSL------------------GSRIRSTFDFGLVTLSINSLR 43
++ W ++G S+ R + +L + LR
Sbjct: 27 NMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86
Query: 44 ADDSAIYTCKATNLLGEAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPE 103
+D YTC T L
Sbjct: 87 VEDEGSYTCL--------FVTFPQGSRSVDIWLR-------------------------- 112
Query: 104 LVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFH 163
V P + + V+ C + P ++ W
Sbjct: 113 -VLAKPQNTAEVQKVQLTGEPVPMARCVSTGGR------------------PPAQITWHS 153
Query: 164 NGKPIFHKNRVKMVSDFGFVVMDIAYV---QSHDSGEYVCQWFVNNKPLP 210
+ + ++V V + + D + C+ V ++
Sbjct: 154 DLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCK--VEHESFE 201
Score = 33.1 bits (75), Expect = 0.59
Identities = 15/122 (12%), Positives = 31/122 (25%), Gaps = 24/122 (19%)
Query: 720 REGENAHFEARLTPTDDPKLK---VEWFWNGKP-------MKTGSRFRTFCDFGFVI--- 766
G++ L + + W +G+ G + FV
Sbjct: 12 FLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARL 71
Query: 767 --------LEISPVYPEDCGQYSCRAYND---YGEAVTSASMKVQGKRSIILESQLPKGM 815
L + + ED G Y+C + + + + ++ G
Sbjct: 72 GAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGE 131
Query: 816 EV 817
V
Sbjct: 132 PV 133
Score = 33.1 bits (75), Expect = 0.69
Identities = 25/188 (13%), Positives = 39/188 (20%), Gaps = 63/188 (33%)
Query: 1441 QSTKFECQLAPVGDPN---MKVEWFLNGKPLP-------HKNRFNPIYDFGYVAMNFGW- 1489
S C L ++ W +G+ ++ +VA G
Sbjct: 15 DSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAE 74
Query: 1490 ----------VYPEDSGEYLCR-ATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEK 1538
+ ED G Y C T G L+ KP
Sbjct: 75 LRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKP----------------- 117
Query: 1539 IREMEASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARFCTRVTGYPRPRVMWLI 1598
+ Q E P C G P ++ W
Sbjct: 118 ------------------------QNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHS 153
Query: 1599 NGHTIVNE 1606
+ +
Sbjct: 154 DLGGMPQT 161
Score = 32.7 bits (74), Expect = 0.90
Identities = 9/70 (12%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Query: 1664 DGDPLPTIKWFREDFPITSSPDFQIH---TFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
G P I W + + + T + S+ I+ D E+ +
Sbjct: 142 GGRPPAQITWHSDLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESFE 201
Query: 1721 AKCSANLVVE 1730
+ +
Sbjct: 202 KPQLLTVSLT 211
Score = 32.4 bits (73), Expect = 0.94
Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 6/97 (6%)
Query: 110 VFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEWFHNGKPIF 169
V + V ++V C ++ + +L + V G
Sbjct: 1 VVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMA-VFHQTQGPSYS 59
Query: 170 HKNRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCQ 201
R++ V+ + + ++ D G Y C
Sbjct: 60 ESKRLEFVAARLGAELRDASLRMFGLRVEDEGSYTCL 96
Score = 30.4 bits (68), Expect = 4.7
Identities = 8/44 (18%), Positives = 16/44 (36%)
Query: 1327 VIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKAT 1370
+ + +L SL + + ED+G Y C + +
Sbjct: 66 FVAARLGAELRDASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDI 109
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A
{Homo sapiens}
Length = 145
Score = 44.4 bits (104), Expect = 5e-05
Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKAL--------SAGSRIKTI 968
+ +D T+ +C+ + +++W + + +RI+ +
Sbjct: 39 DDSQPWTSDETVVAGGTVVLKCQ--VKDHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLV 96
Query: 969 -NDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + + I++V L D G YTC T +TV
Sbjct: 97 TSTPHELSISISNVALADEGEYTCSI-FTMPVRTAKSLVTV 136
Score = 42.9 bits (100), Expect = 2e-04
Identities = 12/118 (10%), Positives = 31/118 (26%), Gaps = 9/118 (7%)
Query: 1730 EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKII----- 1784
++ + + S + G ++ + + W ++ +
Sbjct: 26 DDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEK 85
Query: 1785 ---PDIRYKTLEEDNL-FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAP 1838
D R + + ++ I + D G Y C V+ + P
Sbjct: 86 RALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTMPVRTAKSLVTVLGIPQKP 143
Score = 36.7 bits (84), Expect = 0.021
Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 18/120 (15%)
Query: 100 DEPELVFDSPVFISHLNDVECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKV 159
D P+L D ++ +++ D V L C + + + +
Sbjct: 18 DSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTV-----VLKCQVK--DHEDSSL 70
Query: 160 EWFHNGKPIFHKNRVKMVSDFGFVVMD---------IAYVQSHDSGEYVCQWFVNNKPLP 210
+W + + + + + D ++ I+ V D GEY C + P+
Sbjct: 71 QWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCS--IFTMPVR 128
Score = 35.9 bits (82), Expect = 0.036
Identities = 11/70 (15%), Positives = 26/70 (37%), Gaps = 11/70 (15%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMD---------IAYV 474
G + +C + + + ++W + + + + + D ++ I+ V
Sbjct: 53 GGTVVLKCQVK--DHEDSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNV 110
Query: 475 QSHDSGEYVC 484
D GEY C
Sbjct: 111 ALADEGEYTC 120
Score = 34.0 bits (77), Expect = 0.16
Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 17/106 (16%)
Query: 507 PSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFNGRPFATGSRVKTVYD 558
P + V G V C+++ D +++ W +F + +R++ V
Sbjct: 41 SQPWTSDETVVAGGTVVLKCQVKDHEDSSLQ--WSNPAQQTLYFGEKRALRDNRIQLVTS 98
Query: 559 -FGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
+S+ + V D GEY C + AK ++TV+
Sbjct: 99 TPHELSISISNVALADEGEYTCSIFT---MPVRTAKS---LVTVLG 138
Score = 33.6 bits (76), Expect = 0.26
Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 1042 DELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW--------FFN 1093
D+ + + + V G V C+++ D +++ W +F
Sbjct: 26 DDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQ--WSNPAQQTLYFG 83
Query: 1094 GRPFATGSRVKTVYD-FGFISLDMDYVYARDSGEYICRATN 1133
+ +R++ V +S+ + V D GEY C
Sbjct: 84 EKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFT 124
Score = 31.7 bits (71), Expect = 0.90
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDH 1362
S+ I V D+GEY C +
Sbjct: 104 SISISNVALADEGEYTCSIFTMP 126
Score = 30.9 bits (69), Expect = 2.1
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 7/114 (6%)
Query: 281 KATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTM 340
K + GT + + + S + + G + + D ++
Sbjct: 11 KFERQHMDSPDLGTDDDDKAMADINLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSL 70
Query: 341 ------TVEFLYNGKPIEASHRIRTVH-AFGMVVLEILGTKIEDTGVYTCRATN 387
+ K +RI+ V + + I + D G YTC
Sbjct: 71 QWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYTCSIFT 124
Score = 30.5 bits (68), Expect = 2.3
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 11/94 (11%)
Query: 703 HRQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEW--------FWNGKPMKTGS 754
+ + P ++ + + G + D ++W ++ K +
Sbjct: 34 INLSQDDSQPWTSDETVVAGGTVVL--KCQVKDHEDSSLQWSNPAQQTLYFGEKRALRDN 91
Query: 755 RFR-TFCDFGFVILEISPVYPEDCGQYSCRAYND 787
R + + + IS V D G+Y+C +
Sbjct: 92 RIQLVTSTPHELSISISNVALADEGEYTCSIFTM 125
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A
{Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A
1py9_A
Length = 139
Score = 42.2 bits (99), Expect = 3e-04
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 24/113 (21%)
Query: 921 TTPTDLTLAE--STLAHFECRLTPTNDPS-MTVEWF-----------HNGKALSAG---- 962
P A A CR++P + + M V W+ NGK A
Sbjct: 10 IGPGHPIRALVGDE-AELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPE 68
Query: 963 --SRIKTIND---FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKG 1010
R + + + G V L I +V D G YTC + + + +L V+
Sbjct: 69 YRGRTELLKESIGEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 121
Score = 41.8 bits (98), Expect = 3e-04
Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 21/83 (25%)
Query: 424 GDSAHFECTLTPVNDPE-LKVEWFHNG--KPIF---------------HKNRVKMVSD-- 463
GD A C ++P + ++V W+ + + + ++ R +++ +
Sbjct: 21 GDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESI 80
Query: 464 -FGFVVMDIAYVQSHDSGEYVCR 485
G V + I V+ D G Y C
Sbjct: 81 GEGKVALRIQNVRFSDEGGYTCF 103
Score = 36.4 bits (84), Expect = 0.021
Identities = 14/78 (17%), Positives = 31/78 (39%), Gaps = 21/78 (26%)
Query: 145 LLCTLTPVNDPE-LKVEWFHNG--KPIF---------------HKNRVKMVSD---FGFV 183
L C ++P + ++V W+ + + + ++ R +++ + G V
Sbjct: 26 LPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKV 85
Query: 184 VMDIAYVQSHDSGEYVCQ 201
+ I V+ D G Y C
Sbjct: 86 ALRIQNVRFSDEGGYTCF 103
Score = 33.4 bits (76), Expect = 0.27
Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 21/97 (21%)
Query: 1441 QSTKFECQLAPVGDP-NMKVEWFLNGKPLP-----------------HKNRFNPIYD--- 1479
+ C+++P + M+V W+ + ++ R + +
Sbjct: 22 DEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIG 81
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRATNLYGMDETRAILK 1516
G VA+ V D G Y C + +E LK
Sbjct: 82 EGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELK 118
Score = 33.0 bits (75), Expect = 0.38
Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 21/92 (22%)
Query: 1 VEPRADP-NLKIEWFKNGVPLSL--------------------GSRIRSTFDFGLVTLSI 39
+ P + +++ W+++ + ++ + G V L I
Sbjct: 30 ISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRI 89
Query: 40 NSLRADDSAIYTCKATNLLGEAVSTCTLKIED 71
++R D YTC + + + LK+ED
Sbjct: 90 QNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 121
Score = 32.6 bits (74), Expect = 0.53
Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 21/106 (19%)
Query: 722 GENAHFEARLTPTDDPK-LKVEWFW-----------NGKPMKTG---------SRFRTFC 760
G+ A R++P + ++V W+ NGK +
Sbjct: 21 GDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESI 80
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSII 806
G V L I V D G Y+C + + + +KV+ I
Sbjct: 81 GEGKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDPFYWI 126
Score = 31.4 bits (71), Expect = 1.3
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
G V L I + D G YTC + Q E +V L+
Sbjct: 83 GKVALRIQNVRFSDEGGYTCFFRDHSYQEEAAVELK 118
Score = 30.3 bits (68), Expect = 2.6
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 21/80 (26%)
Query: 522 VHFDCRLEPKSDPT-MRIDWF-----------FNGRPFATG------SRVKTVYD---FG 560
CR+ P + T M + W+ NG+ R + + + G
Sbjct: 24 AELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEG 83
Query: 561 FISLDMDYVYARDSGEYICR 580
++L + V D G Y C
Sbjct: 84 KVALRIQNVRFSDEGGYTCF 103
Score = 30.3 bits (68), Expect = 2.6
Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 21/80 (26%)
Query: 1072 VHFDCRLEPKSDPT-MRIDWF-----------FNGRPFATG------SRVKTVYD---FG 1110
CR+ P + T M + W+ NG+ R + + + G
Sbjct: 24 AELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEG 83
Query: 1111 FISLDMDYVYARDSGEYICR 1130
++L + V D G Y C
Sbjct: 84 KVALRIQNVRFSDEGGYTCF 103
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A*
1ow0_C*
Length = 218
Score = 43.3 bits (102), Expect = 3e-04
Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 19/161 (11%)
Query: 334 PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+ + N E R++ + I G Y C+ +
Sbjct: 33 IREAYLTQLMIIKNSTYREIGRRLKFWNE-TDPEFVIDHMDANKAGRYQCQYRIGHYRFR 91
Query: 394 ISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFH-----N 448
S LE V P ++ + L G++ C+ + + F
Sbjct: 92 YSDTLELVVTGLYGKPFLSADRGLV--LMPGENISLTCS-----SAHIPFDRFSLAKEGE 144
Query: 449 GKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
H++ +F + V + SG Y C W N
Sbjct: 145 LSLPQHQSGEHPA-NF-----SLGPVDLNVSGIYRCYGWYN 179
Score = 40.2 bits (94), Expect = 0.003
Identities = 16/123 (13%), Positives = 29/123 (23%), Gaps = 38/123 (30%)
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKR-------SIILESQLPKGMEV-- 817
I + G+Y C+ + S ++++ S L G +
Sbjct: 66 FVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADRGLVLMPGENISL 125
Query: 818 --------FISFH---------------------EISPVYPEDCGQYSCRAYNDYGEAVT 848
F F + PV G Y C + + +
Sbjct: 126 TCSSAHIPFDRFSLAKEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLW 185
Query: 849 SAS 851
S
Sbjct: 186 SFP 188
Score = 32.5 bits (74), Expect = 1.0
Identities = 15/105 (14%), Positives = 24/105 (22%), Gaps = 20/105 (19%)
Query: 1775 YWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG--EARCEAELVV 1832
+KN R + +I +G Y+C ELVV
Sbjct: 42 MIIKNST-YREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVV 100
Query: 1833 QSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
+ G + G ++L C
Sbjct: 101 TGLYGKPFLSADRG-----------------LVLMPGENISLTCS 128
Score = 32.2 bits (73), Expect = 1.1
Identities = 8/46 (17%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Query: 810 QLPKGMEVFISFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
+L E F I + G+Y C+ + S ++++
Sbjct: 55 RLKFWNETDPEFV-IDHMDANKAGRYQCQYRIGHYRFRYSDTLELV 99
Score = 31.8 bits (72), Expect = 1.5
Identities = 6/32 (18%), Positives = 10/32 (31%)
Query: 765 VILEISPVYPEDCGQYSCRAYNDYGEAVTSAS 796
+ PV G Y C + + + S
Sbjct: 157 ANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFP 188
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate
immunity, immunoglobulin-like I2 type natural killer cell
activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Length = 120
Score = 40.7 bits (95), Expect = 5e-04
Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 18/110 (16%)
Query: 919 FLTTPTDLTLAESTLAHFECRLTPT--NDPSMTVEWF--HNGKAL-------SAGSRIKT 967
+++ P ++ E + A C + +V WF R+
Sbjct: 10 WVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAP 69
Query: 968 INDFGFVI-----LEINDVYLRDSGLYTCKATNKHGEATTSC--KLTVKG 1010
+ F+ L I DV D+ +Y C+ T +L V+
Sbjct: 70 LASSRFLHDHQAELHIRDVRGHDASIYVCRVEVLGLGVGTGNGTRLVVEK 119
Score = 37.2 bits (86), Expect = 0.009
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 24/97 (24%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTP--VNDPELKVEWF----HNGKPIFH-----K 455
QPP+ I++LEG SA C+ V WF GK + + +
Sbjct: 13 QPPE----IRTLEG----SSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFR 64
Query: 456 NRVKMVSDFGFVVMD-----IAYVQSHDSGEYVCRAW 487
R+ ++ F+ I V+ HD+ YVCR
Sbjct: 65 GRLAPLASSRFLHDHQAELHIRDVRGHDASIYVCRVE 101
Score = 29.9 bits (67), Expect = 3.0
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 1564 VFVSQPEAQKVQEGEPARF-CTRVTGYPRPRVMWL 1597
++VSQP + EG A C+ R + +
Sbjct: 9 LWVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSV 43
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein
binding; HET: NAG NDG; 2.40A {Homo sapiens}
Length = 590
Score = 43.9 bits (102), Expect = 5e-04
Identities = 11/80 (13%), Positives = 23/80 (28%), Gaps = 7/80 (8%)
Query: 932 TLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTC 991
+ + C + T W H + + L I ++ + G Y C
Sbjct: 516 SRYYLSCPMES---RHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQYGHYFC 569
Query: 992 KAT-NKHGEATTSCKLTVKG 1010
+A + +L +
Sbjct: 570 EAQEGSYFREAQHWQLLPED 589
Score = 38.8 bits (89), Expect = 0.017
Identities = 8/63 (12%), Positives = 15/63 (23%), Gaps = 6/63 (9%)
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRA 486
+ C P+ W H + + + + + G Y C A
Sbjct: 518 YYLSC---PMESRHATYSWRHKENVEQSCEPGHQSPNCILFIEN---LTAQQYGHYFCEA 571
Query: 487 WNN 489
Sbjct: 572 QEG 574
Score = 38.8 bits (89), Expect = 0.018
Identities = 7/47 (14%), Positives = 8/47 (17%), Gaps = 3/47 (6%)
Query: 1774 VYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNN 1820
W L I + G Y C A
Sbjct: 531 YSWRHKENVEQSCEPGHQSPNC---ILFIENLTAQQYGHYFCEAQEG 574
Score = 37.3 bits (85), Expect = 0.050
Identities = 6/51 (11%), Positives = 13/51 (25%), Gaps = 3/51 (5%)
Query: 151 PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
P+ W H + + + + + G Y C+
Sbjct: 523 PMESRHATYSWRHKENVEQSCEPGHQSPNCILFIEN---LTAQQYGHYFCE 570
Score = 36.5 bits (83), Expect = 0.088
Identities = 10/84 (11%), Positives = 20/84 (23%), Gaps = 6/84 (7%)
Query: 1420 EKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYD 1479
++ P+ + L C P+ + W + +
Sbjct: 495 KECPNPKPDKAPLQKVSLAPNSRYYLSC---PMESRHATYSWRHKENVEQSCEPGHQSPN 551
Query: 1480 FGYVAMNFGWVYPEDSGEYLCRAT 1503
N + + G Y C A
Sbjct: 552 CILFIEN---LTAQQYGHYFCEAQ 572
Score = 36.5 bits (83), Expect = 0.096
Identities = 12/70 (17%), Positives = 17/70 (24%), Gaps = 4/70 (5%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKAT-NLLGEA 61
P + W + + L I +L A Y C+A
Sbjct: 523 PMESRHATYSWRHKENVEQSCEPGHQSPNCILF---IENLTAQQYGHYFCEAQEGSYFRE 579
Query: 62 VSTCTLKIED 71
L ED
Sbjct: 580 AQHWQLLPED 589
Score = 35.0 bits (79), Expect = 0.25
Identities = 9/70 (12%), Positives = 17/70 (24%), Gaps = 4/70 (5%)
Query: 733 PTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAY-NDYGEA 791
P + W ++ + L I + + G Y C A Y
Sbjct: 523 PMESRHATYSWRHKENVEQSCEPGHQSPNCI---LFIENLTAQQYGHYFCEAQEGSYFRE 579
Query: 792 VTSASMKVQG 801
+ +
Sbjct: 580 AQHWQLLPED 589
Score = 35.0 bits (79), Expect = 0.31
Identities = 8/58 (13%), Positives = 15/58 (25%), Gaps = 4/58 (6%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRAT-NKYGSDVTKASL 659
W + + + I ++ + G Y C A Y + L
Sbjct: 531 YSWRHKENVEQSCEPGHQSPNCILFIENLT---AQQYGHYFCEAQEGSYFREAQHWQL 585
Score = 33.1 bits (74), Expect = 0.94
Identities = 10/91 (10%), Positives = 21/91 (23%), Gaps = 6/91 (6%)
Query: 494 PPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRV 553
P P + + + + + C +E W +
Sbjct: 490 PAEPHKECPNPKPDKAPLQKVSLAPNSRYYLSCPMES---RHATYSWRHKENVEQSCEPG 546
Query: 554 KTVYDFGFISLDMDYVYARDSGEYICRATNK 584
+ + + A+ G Y C A
Sbjct: 547 HQSPNCILFIEN---LTAQQYGHYFCEAQEG 574
Score = 32.7 bits (73), Expect = 1.5
Identities = 9/86 (10%), Positives = 21/86 (24%), Gaps = 6/86 (6%)
Query: 1049 EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 1108
++ P + + + + C +E W + +
Sbjct: 495 KECPNPKPDKAPLQKVSLAPNSRYYLSCPMES---RHATYSWRHKENVEQSCEPGHQSPN 551
Query: 1109 FGFISLDMDYVYARDSGEYICRATNK 1134
+ + A+ G Y C A
Sbjct: 552 CILFIEN---LTAQQYGHYFCEAQEG 574
Score = 30.0 bits (66), Expect = 8.3
Identities = 8/55 (14%), Positives = 16/55 (29%), Gaps = 3/55 (5%)
Query: 334 PVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNK 388
P+ + T + + ++ +L I + G Y C A
Sbjct: 523 PMESRHATYSWRHKENVEQSCEPGHQS---PNCILFIENLTAQQYGHYFCEAQEG 574
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion
protein, immunoglobulin fold, I-SET fold, cell adhesion
glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
PDB: 1bqs_A*
Length = 210
Score = 42.2 bits (98), Expect = 6e-04
Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 16/160 (10%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
CRL D +V+W +L +D G +L + + L +G C +
Sbjct: 27 LTCRLAC-ADRGASVQWRGLDTSLG-----AVQSDTGRSVLTVRNASLSAAGTRVCVGSC 80
Query: 996 KHGEATTSCKLTVKGRQGIDVEPQVSAIFANAT----------KNIQKLEEALYRKDELI 1045
+ +L V + + + + L +L + +
Sbjct: 81 GGRTFQHTVQLLVYAFPNQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQEL 140
Query: 1046 PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPT 1085
+ P V + + D +V RL P P
Sbjct: 141 EGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPV 180
Score = 39.1 bits (90), Expect = 0.006
Identities = 20/136 (14%), Positives = 34/136 (25%), Gaps = 13/136 (9%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G S C L D V+W + + SD G V+ + +G V
Sbjct: 22 GASRQLTCRLA-CADRGASVQWRGLDTSL-----GAVQSDTGRSVLTVRNASLSAAGTRV 75
Query: 484 CRAWNNFI-FIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE---PKSDPTMRID 539
C F + ++ P+ + G C P +
Sbjct: 76 CVGSCGGRTFQHTVQLLVYA---FPNQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFS 132
Query: 540 WFFNGRPFATGSRVKT 555
G+ +
Sbjct: 133 LLVGGQELEGAQALGP 148
Score = 38.0 bits (87), Expect = 0.016
Identities = 19/98 (19%), Positives = 28/98 (28%), Gaps = 11/98 (11%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKD 423
G VL + + G C + + +V L V Q S L
Sbjct: 57 GRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLL-VYAFPNQL------TVSPAALVP 109
Query: 424 GDSAHFECTLT---PVNDPELKVEWFHNGKPIFHKNRV 458
GD CT PV+ L G+ + +
Sbjct: 110 GDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQAL 146
Score = 33.7 bits (76), Expect = 0.42
Identities = 17/134 (12%), Positives = 33/134 (24%), Gaps = 8/134 (5%)
Query: 704 RQAPVFTVPLSNIDDLREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
+ P+ P + + G + RL D V+W + G
Sbjct: 4 QVKPLQVEPPEPVVAVALGASRQLTCRLACAD-RGASVQWRGLDTSLGAVQSDT-----G 57
Query: 764 FVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI-ILESQLPKGMEVFISFH 822
+L + G C + + V + + + ++
Sbjct: 58 RSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPAALVPGDPEVACT 117
Query: 823 EISPVYPEDCGQYS 836
V P D S
Sbjct: 118 -AHKVTPVDPNALS 130
Score = 30.6 bits (68), Expect = 3.3
Identities = 11/81 (13%), Positives = 21/81 (25%), Gaps = 6/81 (7%)
Query: 1441 QSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLC 1500
S + C+ D V+W L + + G + +G +C
Sbjct: 23 ASRQLTCR-LACADRGASVQWRGLDTSLG-AVQSDT----GRSVLTVRNASLSAAGTRVC 76
Query: 1501 RATNLYGMDETRAILKTTGKP 1521
+ + L P
Sbjct: 77 VGSCGGRTFQHTVQLLVYAFP 97
Score = 30.6 bits (68), Expect = 4.0
Identities = 7/44 (15%), Positives = 14/44 (31%)
Query: 1790 KTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQ 1833
+ L + A + +G CV + +L+V
Sbjct: 51 AVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY 94
Score = 30.3 bits (67), Expect = 5.1
Identities = 13/88 (14%), Positives = 24/88 (27%), Gaps = 6/88 (6%)
Query: 508 SPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMD 567
P + + V CRL +D + W D G L +
Sbjct: 11 EPPEPVVAVALGASRQLTCRLAC-ADRGASVQWRGLDTSLG-----AVQSDTGRSVLTVR 64
Query: 568 YVYARDSGEYICRATNKWGTAMTKAKVI 595
+G +C + T +++
Sbjct: 65 NASLSAAGTRVCVGSCGGRTFQHTVQLL 92
Score = 30.3 bits (67), Expect = 5.5
Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 6/93 (6%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI 1112
P+ + + V CRL +D + W D G
Sbjct: 6 KPLQVEPPEPVVAVALGASRQLTCRLAC-ADRGASVQWRGLDTSLG-----AVQSDTGRS 59
Query: 1113 SLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 1145
L + +G +C + T +++
Sbjct: 60 VLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLL 92
>1xiw_A T-cell surface glycoprotein CD3 epsilon chain; CD3-epsilon,
CD3-delta, UCHT1-SCFV, immunoglobulin fold,
antibody-antigen complex; 1.90A {Homo sapiens} SCOP:
b.1.1.4
Length = 105
Score = 39.8 bits (92), Expect = 9e-04
Identities = 16/76 (21%), Positives = 23/76 (30%), Gaps = 5/76 (6%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
C P ++ + W HN K + K I + L SG Y C
Sbjct: 26 LTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRG 81
Query: 996 KHGEATTSCKLTVKGR 1011
E L ++ R
Sbjct: 82 SKPEDANF-YLYLRAR 96
Score = 39.8 bits (92), Expect = 0.001
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 1773 DVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEAR 1825
++ W N K I D K + D L + +E SG Y C + E
Sbjct: 35 EILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 87
Score = 37.5 bits (86), Expect = 0.006
Identities = 12/83 (14%), Positives = 20/83 (24%), Gaps = 9/83 (10%)
Query: 1649 CRAFEQDQARFEVEFDG---------DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 1699
Q ++V G P I W D I D + + +
Sbjct: 5 EEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLK 64
Query: 1700 RQVFMEDSGVFAVIAENRGGKAK 1722
+E SG + +
Sbjct: 65 EFSELEQSGYYVCYPRGSKPEDA 87
Score = 36.3 bits (83), Expect = 0.015
Identities = 8/60 (13%), Positives = 14/60 (23%)
Query: 4 RADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVS 63
P +I W N + ++ + S Y C E +
Sbjct: 29 PQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 88
Score = 34.4 bits (78), Expect = 0.073
Identities = 17/96 (17%), Positives = 28/96 (29%), Gaps = 10/96 (10%)
Query: 505 RLPSPSQDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS 563
+ +Q V +G V C P S+ I W N + K +
Sbjct: 6 EMGGITQTPYKVSISGTTVILTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHL 61
Query: 564 LDMDYVYARDSGEYICRATNKWGTAMT-----KAKV 594
++ SG Y+C +A+V
Sbjct: 62 SLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRARV 97
Score = 34.0 bits (77), Expect = 0.10
Identities = 9/53 (16%), Positives = 15/53 (28%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVT 655
+ W +N K + + + + E SG Y C D
Sbjct: 36 ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDAN 88
Score = 33.6 bits (76), Expect = 0.13
Identities = 14/66 (21%), Positives = 22/66 (33%), Gaps = 4/66 (6%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G + C P ++ W HN K I K + + + + SG YV
Sbjct: 21 GTTVILTCPQ----YPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYV 76
Query: 484 CRAWNN 489
C +
Sbjct: 77 CYPRGS 82
Score = 32.8 bits (74), Expect = 0.25
Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 10/90 (11%)
Query: 1061 QDNLDVPEAG-KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYV 1119
Q V +G V C P S+ I W N + K + ++
Sbjct: 12 QTPYKVSISGTTVILTCPQYPGSE----ILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFS 67
Query: 1120 YARDSGEYICRATNKWGTAMT-----KAKV 1144
SG Y+C +A+V
Sbjct: 68 ELEQSGYYVCYPRGSKPEDANFYLYLRARV 97
Score = 31.7 bits (71), Expect = 0.58
Identities = 14/54 (25%), Positives = 20/54 (37%)
Query: 148 TLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
LT P ++ W HN K I K + + + + SG YVC
Sbjct: 25 ILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCY 78
Score = 31.3 bits (70), Expect = 0.88
Identities = 11/59 (18%), Positives = 16/59 (27%)
Query: 1454 DPNMKVEWFLNGKPLPHKNRFNPIYDFGYVAMNFGWVYPEDSGEYLCRATNLYGMDETR 1512
P ++ W N K + I + E SG Y+C D
Sbjct: 31 YPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANF 89
Score = 29.7 bits (66), Expect = 2.4
Identities = 11/64 (17%), Positives = 16/64 (25%)
Query: 731 LTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGE 790
LT P ++ W N K + + + E G Y C E
Sbjct: 26 LTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPE 85
Query: 791 AVTS 794
Sbjct: 86 DANF 89
Score = 29.7 bits (66), Expect = 2.4
Identities = 7/53 (13%), Positives = 19/53 (35%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAE 393
+ + +N K I + + + + +++E +G Y C +
Sbjct: 35 EILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDA 87
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C
region, hinge region, immunoglobulin; HET: NAG FUL NDG
BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1
b.1.1.2 b.1.1.2 b.1.1.2
Length = 434
Score = 43.0 bits (101), Expect = 9e-04
Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 12/160 (7%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFG-----MVVLEILGTKIEDTGVYTCRATNKWGQ 391
D + + + + + F + L I+ + + CR +
Sbjct: 261 DPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFP 320
Query: 392 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP 451
A I + K K + P+ + E + D C +T ++ VEW +G+
Sbjct: 321 APIEKTI-SKTKGKPRAPQVYTIPPPKEQM-AKDKVSLTCMITDFFPEDITVEWQSDGQA 378
Query: 452 IFHKNRVKMVSDFG--FVVMDIAYVQSHD--SGE-YVCRA 486
+ + + D + V VQ + +G + C
Sbjct: 379 PENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSV 418
Score = 42.2 bits (99), Expect = 0.001
Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 31/209 (14%)
Query: 377 DTGVYTCRATNKWGQAEISVNLE--------CVDKSKGQPPKFTSHIKSLEGLKDGDSAH 428
+ TC + ++ + C+ F K + L +
Sbjct: 190 PSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPK 249
Query: 429 FECTLTPV--NDPELKVEWFHNGKPI---FHKNRVKMVSDF--GFVVMDIAYVQSHDSGE 481
C + + +DPE++ WF + + + R + + + I + + E
Sbjct: 250 VTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKE 309
Query: 482 YVCRAWNNFIFIPPFPIFIFH----------QIRLPSPSQDNLDVPEAGKVHFDCRLEPK 531
+ CR + P PI Q+ P ++ + KV C +
Sbjct: 310 FKCRVNSAAF---PAPIEKTISKTKGKPRAPQVYTIPPPKEQMA---KDKVSLTCMITDF 363
Query: 532 SDPTMRIDWFFNGRPFATGSRVKTVYDFG 560
+ ++W +G+ + + D
Sbjct: 364 FPEDITVEWQSDGQAPENYKNTQPIMDTD 392
Score = 38.7 bits (90), Expect = 0.017
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP ++ WF + V + F + L I + + C+ +
Sbjct: 261 DPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNS 316
Score = 32.2 bits (73), Expect = 1.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SL +DDSA+Y C
Sbjct: 78 ANIHLSSLTSDDSAVYYC 95
Score = 31.4 bits (71), Expect = 2.8
Identities = 20/123 (16%), Positives = 34/123 (27%), Gaps = 10/123 (8%)
Query: 707 PVFTVPLSNIDDLREGENAHF--EAR-LTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFG 763
VF P D L ++ DDP+++ WF + + T F
Sbjct: 230 SVFIFPPKPKDTLLITVTPKVTCVVVDISK-DDPEVQFSWFVDNVEVHTAQTQPREEQFN 288
Query: 764 -----FVILEISPVYPEDCGQYSC-RAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEV 817
L I + ++ C + + K +GK +P E
Sbjct: 289 STFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQ 348
Query: 818 FIS 820
Sbjct: 349 MAK 351
Score = 31.0 bits (70), Expect = 3.6
Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 6/62 (9%)
Query: 940 LTPTNDPSMTVEWFHNGKALSAGSRIKTINDFG-----FVILEINDVYLRDSGLYTCKAT 994
++ DP + WF + + F L I + + C+
Sbjct: 257 ISKD-DPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVN 315
Query: 995 NK 996
+
Sbjct: 316 SA 317
Score = 30.3 bits (68), Expect = 7.5
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 18/117 (15%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVG----DPNMKVEWFLNGKPLPHKNR 1473
+ F+ K +D L+ + K C + V DP ++ WF++ +
Sbjct: 223 CTVPEVSSVFIFPPKPKDTLLITVTPKVTCVV--VDISKDDPEVQFSWFVDNVEVHTAQT 280
Query: 1474 FNPIYDFG--YVAMNF------GWVYPEDSGEYLCRATN-LYGMDETRAILKTTGKP 1521
F + ++ W + E+ CR + + + I KT GKP
Sbjct: 281 QPREEQFNSTFRVVSALPIMHQDW---LNGKEFKCRVNSAAFPAPIEKTISKTKGKP 334
Score = 29.9 bits (67), Expect = 9.6
Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
Query: 134 PSKDATMKIG---KLLCTLTPV--NDPELKVEWFHNGKPI---FHKNRVKMVSDF--GFV 183
P T+ I K+ C + + +DPE++ WF + + + R + +
Sbjct: 236 PKPKDTLLITVTPKVTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVS 295
Query: 184 VMDIAYVQSHDSGEYVCQWFVNNKPLPAG 212
+ I + + E+ C+ VN+ PA
Sbjct: 296 ALPIMHQDWLNGKEFKCR--VNSAAFPAP 322
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A
{Homo sapiens}
Length = 184
Score = 41.3 bits (97), Expect = 9e-04
Identities = 22/150 (14%), Positives = 40/150 (26%), Gaps = 44/150 (29%)
Query: 739 LKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTS---- 794
V+ + K + + + +L I + G+Y C N ++ S
Sbjct: 33 PGVDLYRLEKLSSSRYQDQA-------VLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLE 85
Query: 795 ---------------ASMKVQGKRSIILESQLPKGMEVFISFHE---------------- 823
V + L+ Q G + F + E
Sbjct: 86 LVATGVFAKPSLSAQPGPAVSSGGDVTLQCQTRYGFDQFALYKEGDPAPYKNPERWYRAS 145
Query: 824 --ISPVYPEDCGQYSCRAYNDYGEAVTSAS 851
I V G Y C +++ + SA
Sbjct: 146 FPIITVTAAHSGTYRCYSFSSRDPYLWSAP 175
Score = 41.0 bits (96), Expect = 0.001
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 11/123 (8%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L I K G Y C N + S LE V P ++ + G
Sbjct: 54 LFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQPGPA--VSSGGDV 111
Query: 428 HFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMV-SDFGFVVMDIAYVQSHDSGEYVCRA 486
+C D + + G P +KN + + F I V + SG Y C +
Sbjct: 112 TLQCQTRYGFD---QFALYKEGDPAPYKNPERWYRASF-----PIITVTAAHSGTYRCYS 163
Query: 487 WNN 489
+++
Sbjct: 164 FSS 166
Score = 34.4 bits (79), Expect = 0.17
Identities = 21/124 (16%), Positives = 31/124 (25%), Gaps = 11/124 (8%)
Query: 267 IVGAYAEDSGIYTVKATNSKGSATTSGTLKCLERLFVNHNYPLFSLQFQHLSNLSEGEIA 326
I +G Y N + S L L + SL Q +S G
Sbjct: 56 IPAMKRSLAGRYRCSYQNGSLWSLPSDQL----ELVATGVFAKPSLSAQPGPAVSSGGDV 111
Query: 327 HFEASLIPVGDQTMTVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRAT 386
+ D G P + R A I+ +G Y C +
Sbjct: 112 TLQCQTRYGFD---QFALYKEGDPAPYKNPERWYRA----SFPIITVTAAHSGTYRCYSF 164
Query: 387 NKWG 390
+
Sbjct: 165 SSRD 168
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick
filament, immune system, cell adhesion; NMR {Mus
musculus}
Length = 142
Score = 40.7 bits (95), Expect = 9e-04
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 6/126 (4%)
Query: 1035 EEALYRKDELIPDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNG 1094
EE + R L + + P P S+L +++ E G+V F + E S ++ + FN
Sbjct: 21 EEEMKRLLALSQEHKFPTVP-TKSEL--AVEILEKGQVRFWMQAEKLS-SNAKVSYIFNE 76
Query: 1095 RPFATGSRVKTVYDF--GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKAKHDI 1152
+ G + K D G I + M+ + D G Y + + T + +I +
Sbjct: 77 KEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDVYKKL 136
Query: 1153 VTESQL 1158
E++
Sbjct: 137 QKEAEF 142
Score = 39.2 bits (91), Expect = 0.002
Identities = 21/99 (21%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 502 HQIRLPS---PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYD 558
+ + P+ S+ +++ E G+V F + E S ++ + FN + G + K D
Sbjct: 32 QEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLS-SNAKVSYIFNEKEIFEGPKYKMHID 90
Query: 559 F--GFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVI 595
G I + M+ + D G Y + + G A + ++
Sbjct: 91 RNTGIIEMFMEKLQDEDEGTYTFQIQD--GKATGHSTLV 127
Score = 36.5 bits (84), Expect = 0.026
Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Query: 1627 ERVVDASEKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPITSSPD 1685
+R++ S++ P V TK E+ Q RF ++ + + + + I P
Sbjct: 25 KRLLALSQEHKFPTVPTKSELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPK 84
Query: 1686 FQIHTFSTKSI--LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 1731
+++H I + M ++ ED G + ++ + L+ +
Sbjct: 85 YKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVLIGDV 132
Score = 35.4 bits (81), Expect = 0.054
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDF--GLVTLSINSLRADDSAIYTCKATNLLGEAVST 64
N K+ + N + G + + D G++ + + L+ +D YT + + G+A
Sbjct: 66 SNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQD--GKATGH 123
Query: 65 CTL 67
TL
Sbjct: 124 STL 126
Score = 35.0 bits (80), Expect = 0.085
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Query: 240 EWFVNNKPLPAGAKFKTTHDF--GYVALDIVGAYAEDSGIYTVKATNSKGSATTS 292
+ N K + G K+K D G + + + ED G YT + + K + ++
Sbjct: 71 SYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHST 125
Score = 34.2 bits (78), Expect = 0.14
Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 946 PSMTVEWFHNGKALSAGS--RIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTS 1003
+ V + N K + G ++ + G + + + + D G YT + + G+AT
Sbjct: 66 SNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQD--GKATGH 123
Query: 1004 CKLTVKG 1010
L + G
Sbjct: 124 STLVLIG 130
Score = 32.7 bits (74), Expect = 0.46
Identities = 11/60 (18%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 341 TVEFLYNGKPIEAS--HRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNL 398
V +++N K I +++ G++ + + + ED G YT + + ++ L
Sbjct: 69 KVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATGHSTLVL 128
Score = 31.1 bits (70), Expect = 1.4
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 155 PELKVEWFHNGKPIFH--KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
KV + N K IF K ++ + + G + M + +Q D G Y Q
Sbjct: 66 SNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 114
Score = 29.6 bits (66), Expect = 5.4
Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 603 VEWFYNGKKLPHGHRYRTFHDF--GIVILDILYCYEENSGVYECRATNKYGSD 653
V + +N K++ G +Y+ D GI+ + + +E+ G Y + + +
Sbjct: 70 VSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQDGKATG 122
Score = 29.2 bits (65), Expect = 6.2
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 439 PELKVEWFHNGKPIFH--KNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWN 488
KV + N K IF K ++ + + G + M + +Q D G Y + +
Sbjct: 66 SNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQIQD 117
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine;
HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Length = 240
Score = 41.9 bits (98), Expect = 0.001
Identities = 23/146 (15%), Positives = 41/146 (28%), Gaps = 28/146 (19%)
Query: 379 GVYTCRATNKWG-------QAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
G +C T+ SV L PPK + L + C
Sbjct: 1 GTKSCDKTHTCPPCPAPELLGGPSVFL--------FPPK------PKDTLMISRTPEVTC 46
Query: 432 TLT--PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM-----DIAYVQSHDSGEYVC 484
+ DPE+K W+ +G + + + + + + EY C
Sbjct: 47 VVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKC 106
Query: 485 RAWNNFIFIPPFPIFIFHQIRLPSPS 510
+ N + P + + P
Sbjct: 107 KVSNKALPAPIEKTISKAKGQPREPQ 132
Score = 32.6 bits (74), Expect = 0.92
Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 12/91 (13%)
Query: 134 PSKDATMKIGK-----LLCTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVM--- 185
P T+ I + + DPE+K W+ +G + + +
Sbjct: 30 PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVS 89
Query: 186 --DIAYVQSHDSGEYVCQWFVNNKPLPAGAK 214
+ + + EY C+ V+NK LPA +
Sbjct: 90 VLTVLHQDWLNGKEYKCK--VSNKALPAPIE 118
Score = 31.8 bits (72), Expect = 1.6
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP +K W+ +GV + + + L++ + Y CK +N
Sbjct: 55 DPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 110
Score = 31.8 bits (72), Expect = 1.7
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 10/107 (9%)
Query: 922 TPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAG---SRIKTINDFGFVI- 975
P D + T C + DP + W+ +G + R + N V+
Sbjct: 31 KPKDTLMISRT-PEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVS 89
Query: 976 -LEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
L + + Y CK + + + T+ +G EPQV
Sbjct: 90 VLTVLHQDWLNGKEYKCKVS--NKALPAPIEKTISKAKGQPREPQVY 134
Score = 30.7 bits (69), Expect = 4.1
Identities = 16/87 (18%), Positives = 28/87 (32%), Gaps = 7/87 (8%)
Query: 708 VFTVPLSNIDDLREGENAHF--EARLTPTDDPKLKVEWFWNGKPMKTG---SRFRTFCDF 762
VF P D L +DP++K W+ +G + R +
Sbjct: 25 VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNST 84
Query: 763 GFVI--LEISPVYPEDCGQYSCRAYND 787
V+ L + + +Y C+ N
Sbjct: 85 YRVVSVLTVLHQDWLNGKEYKCKVSNK 111
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta
barrel, immunoglobulin fold, IGV domain, TIM,
glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB:
3bi9_X* 3bib_X*
Length = 116
Score = 39.6 bits (92), Expect = 0.001
Identities = 13/81 (16%), Positives = 20/81 (24%), Gaps = 19/81 (23%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFH-----------------KNRVKMVSDF-- 464
G C + + W P + ++
Sbjct: 11 GQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQF 70
Query: 465 GFVVMDIAYVQSHDSGEYVCR 485
G V + I+ DSG Y CR
Sbjct: 71 GEVSLTISNTNRGDSGVYCCR 91
Score = 35.7 bits (82), Expect = 0.027
Identities = 15/87 (17%), Positives = 24/87 (27%), Gaps = 24/87 (27%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPIFH-----------------KNRVKMVSDF--GFVVM 185
L C + + W P + ++ G V +
Sbjct: 16 LPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSL 75
Query: 186 DIAYVQSHDSGEYVCQ-----WFVNNK 207
I+ DSG Y C+ WF + K
Sbjct: 76 TISNTNRGDSGVYCCRIEVPGWFNDVK 102
Score = 35.3 bits (81), Expect = 0.036
Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 19/90 (21%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRVKTVYDF- 559
S+D + V C S + W P + G+R+ +
Sbjct: 2 SEDTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTK 61
Query: 560 ---------GFISLDMDYVYARDSGEYICR 580
G +SL + DSG Y CR
Sbjct: 62 YTLLGKVQFGEVSLTISNTNRGDSGVYCCR 91
Score = 33.4 bits (76), Expect = 0.18
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 19/71 (26%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGS-------------------RIRSTFDFGLVTLSINSL 42
+ + W K P S + + FG V+L+I++
Sbjct: 21 LSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNT 80
Query: 43 RADDSAIYTCK 53
DS +Y C+
Sbjct: 81 NRGDSGVYCCR 91
Score = 33.4 bits (76), Expect = 0.18
Identities = 17/89 (19%), Positives = 26/89 (29%), Gaps = 19/89 (21%)
Query: 1061 QDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRVKTVYDF-- 1109
+D + V C S + W P + G+R+ +
Sbjct: 3 EDTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKY 62
Query: 1110 --------GFISLDMDYVYARDSGEYICR 1130
G +SL + DSG Y CR
Sbjct: 63 TLLGKVQFGEVSLTISNTNRGDSGVYCCR 91
Score = 32.6 bits (74), Expect = 0.28
Identities = 13/74 (17%), Positives = 24/74 (32%), Gaps = 19/74 (25%)
Query: 938 CRLTPTNDPSMTVEWF---------------HNGKALSAGS----RIKTINDFGFVILEI 978
C + ++ W +G + + + FG V L I
Sbjct: 18 CHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTI 77
Query: 979 NDVYLRDSGLYTCK 992
++ DSG+Y C+
Sbjct: 78 SNTNRGDSGVYCCR 91
Score = 31.1 bits (70), Expect = 1.2
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 1337 GFVSLDIDYVYPEDQGEYVCR 1357
G VSL I D G Y CR
Sbjct: 71 GEVSLTISNTNRGDSGVYCCR 91
Score = 29.9 bits (67), Expect = 2.4
Identities = 13/82 (15%), Positives = 20/82 (24%), Gaps = 19/82 (23%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWNGKPM-----------------KTGSRFRTFCDF- 762
G+ + + W P + +++
Sbjct: 10 LGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQ 69
Query: 763 -GFVILEISPVYPEDCGQYSCR 783
G V L IS D G Y CR
Sbjct: 70 FGEVSLTISNTNRGDSGVYCCR 91
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform
1; immunoglobulin-like fold, immune system; 1.85A {Homo
sapiens}
Length = 196
Score = 41.0 bits (96), Expect = 0.001
Identities = 25/170 (14%), Positives = 42/170 (24%), Gaps = 16/170 (9%)
Query: 331 SLIPVGD--------QTMTVEF-LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
S+I G+ E+ L E + I G Y
Sbjct: 14 SVISRGNSVTIRCQGTLEAQEYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRY 73
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL 441
C + G +E S LE V P ++ + G++ +C D
Sbjct: 74 RCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPS--PVVTSGENVTLQCGSRLRFD--- 128
Query: 442 KVEWFHNG--KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+ G K + + S + + V C
Sbjct: 129 RFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRR 178
Score = 36.8 bits (85), Expect = 0.036
Identities = 18/128 (14%), Positives = 30/128 (23%), Gaps = 43/128 (33%)
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSASMK-------------------VQGKRSIIL 807
I + G+Y C Y+ G + S ++ V ++ L
Sbjct: 60 FSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALPSPVVTSGENVTL 119
Query: 808 ESQLPKGMEVFISFHE------------------------ISPVYPEDCGQYSCRAYNDY 843
+ + FI E + PV P C +
Sbjct: 120 QCGSRLRFDRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRH 179
Query: 844 GEAVTSAS 851
V S
Sbjct: 180 ILQVWSEP 187
Score = 34.1 bits (78), Expect = 0.25
Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 8/61 (13%)
Query: 736 DPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSA 795
+ K+ W + + +G F + PV P C + V S
Sbjct: 135 EGDHKLSWTLDSQLTPSGQFQALF--------PVGPVTPSHRWMLRCYGSRRHILQVWSE 186
Query: 796 S 796
Sbjct: 187 P 187
Score = 33.7 bits (77), Expect = 0.32
Identities = 25/113 (22%), Positives = 29/113 (25%), Gaps = 19/113 (16%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG--EA 1824
T Y L P LE N I +G Y C + AG E
Sbjct: 27 QGTLEAQEYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGWSEP 86
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
ELVV + P V G VTL+C
Sbjct: 87 SDPLELVVTGFYNKPTLSALPS-----------------PVVTSGENVTLQCG 122
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology,
X-RAY solution scattering, constrained modelling, immune
system; NMR {Homo sapiens}
Length = 523
Score = 42.5 bits (100), Expect = 0.001
Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 38/243 (15%)
Query: 376 EDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTP 435
+ Y+C+ T++ E +V S + P S + G +A C
Sbjct: 188 KSHRSYSCQVTHEGSTVEKTVAPTECSAST-KGPSVFPLAPSSKST-SGGTAALGCL--- 242
Query: 436 VND--PE-LKVEW--------FHNGKPIFHKNRVKMVSDFGFVVMDIAYV----QSHDSG 480
V D P+ + V W H + + + +S + V S +
Sbjct: 243 VKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLS---------SVVTVPSSSLGTQ 293
Query: 481 EYVCR----AWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTM 536
Y+C N + P+ + P +D L + +V DP +
Sbjct: 294 TYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQV 353
Query: 537 RIDWFFNGRPFATGSRVKTVYD----FGFIS-LDMDYVYARDSGEYICRATNKWGTAMTK 591
+ +W+ +G + +S L + + D EY C+ +NK A +
Sbjct: 354 KFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIE 413
Query: 592 AKV 594
+
Sbjct: 414 KTI 416
Score = 37.1 bits (86), Expect = 0.053
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFGLV-----TLSINSLRADDSAIYTCKATN 56
DP +K W+ +GV + + L++ D Y CK +N
Sbjct: 350 DPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSN 405
Score = 36.4 bits (84), Expect = 0.11
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHAFG-----MVVLEILGTKIEDTGVYTCRATNKWG 390
D + + +G + + + + VL +L D Y C+ +NK
Sbjct: 349 EDPQVKFNWYVDGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKAL 408
Query: 391 QAEISVNLECVDKSKGQP--PKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHN 448
A I + K+KGQP P+ + S E + + C + ++ VEW N
Sbjct: 409 PAPIEKT---ISKAKGQPREPQVYTLPPSREEMT-KNQVSLTCLVKGFYPSDIAVEWESN 464
Query: 449 GKP 451
G+P
Sbjct: 465 GQP 467
Score = 36.4 bits (84), Expect = 0.11
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 11 IEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
+ + P + +R + +L+I+ L A+D + Y C + N
Sbjct: 46 LIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWN 91
Score = 32.9 bits (75), Expect = 1.2
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 11/91 (12%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEI---SVNLECVDKSKGQPPKFTSHIKSLEGLKDG 424
L I G + ED Y C + N + + + + + K P S E
Sbjct: 72 LAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEEL--QA 129
Query: 425 DSAHFECTLTPVND--PE-LKVEWFHNGKPI 452
+ A C ++D P + V W +G P+
Sbjct: 130 NKATLVCL---ISDFYPGAVTVAWKADGSPV 157
Score = 31.0 bits (70), Expect = 4.5
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 1340 SLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIPT 1378
L + + D EY C+ N A + TIS K
Sbjct: 385 VLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQP 423
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin
mucin, signaling protein; 1.95A {Mus musculus} PDB:
3kaa_A*
Length = 109
Score = 39.1 bits (91), Expect = 0.001
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 20/82 (24%)
Query: 424 GDSAHFECTLT-PVNDPELKVEWFHNGKPIFH-----------------KNRVKMVSDF- 464
G +A+ C+ T P + + + W P +R ++ D
Sbjct: 9 GKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLN 68
Query: 465 -GFVVMDIAYVQSHDSGEYVCR 485
G V + I V D G Y CR
Sbjct: 69 KGDVSLIIKNVTLDDHGTYCCR 90
Score = 33.4 bits (76), Expect = 0.15
Identities = 19/89 (21%), Positives = 26/89 (29%), Gaps = 20/89 (22%)
Query: 512 DNLDVPEAGKVHFDCRLE-PKSDPTMRIDWFFNGRP-----------------FATGSRV 553
D V + C P S + + W P + SR
Sbjct: 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRY 61
Query: 554 KTVYDF--GFISLDMDYVYARDSGEYICR 580
+ D G +SL + V D G Y CR
Sbjct: 62 QLKGDLNKGDVSLIIKNVTLDDHGTYCCR 90
Score = 33.4 bits (76), Expect = 0.15
Identities = 19/89 (21%), Positives = 26/89 (29%), Gaps = 20/89 (22%)
Query: 1062 DNLDVPEAGKVHFDCRLE-PKSDPTMRIDWFFNGRP-----------------FATGSRV 1103
D V + C P S + + W P + SR
Sbjct: 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRY 61
Query: 1104 KTVYDF--GFISLDMDYVYARDSGEYICR 1130
+ D G +SL + V D G Y CR
Sbjct: 62 QLKGDLNKGDVSLIIKNVTLDDHGTYCCR 90
Score = 33.4 bits (76), Expect = 0.17
Identities = 16/77 (20%), Positives = 25/77 (32%), Gaps = 20/77 (25%)
Query: 145 LLCTLT-PVNDPELKVEWFHNGKPIFH-----------------KNRVKMVSDF--GFVV 184
L C+ T P + + + W P +R ++ D G V
Sbjct: 14 LPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVS 73
Query: 185 MDIAYVQSHDSGEYVCQ 201
+ I V D G Y C+
Sbjct: 74 LIIKNVTLDDHGTYCCR 90
Score = 32.6 bits (74), Expect = 0.28
Identities = 16/70 (22%), Positives = 24/70 (34%), Gaps = 19/70 (27%)
Query: 3 PRADPNLKIEWFKNGVPLS-----------------LGSRIRSTFDF--GLVTLSINSLR 43
P + + + W K P S SR + D G V+L I ++
Sbjct: 21 PTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVT 80
Query: 44 ADDSAIYTCK 53
DD Y C+
Sbjct: 81 LDDHGTYCCR 90
Score = 31.8 bits (72), Expect = 0.47
Identities = 22/98 (22%), Positives = 31/98 (31%), Gaps = 22/98 (22%)
Query: 934 AHFECRLT-PTNDPSMTVEWF-----------------HNGKALSAGSRIKTINDF--GF 973
A+ C T PT+ + + W SR + D G
Sbjct: 12 AYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGD 71
Query: 974 VILEINDVYLRDSGLYTCKATNK--HGEATTSCKLTVK 1009
V L I +V L D G Y C+ + KL +K
Sbjct: 72 VSLIIKNVTLDDHGTYCCRIQFPGLMNDKKLELKLDIK 109
Score = 29.9 bits (67), Expect = 2.3
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 1337 GFVSLDIDYVYPEDQGEYVCR 1357
G VSL I V +D G Y CR
Sbjct: 70 GDVSLIIKNVTLDDHGTYCCR 90
Score = 29.9 bits (67), Expect = 2.8
Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 20/83 (24%)
Query: 721 EGENAHFEARLT-PTDDPKLKVEWFWNGKP-----------------MKTGSRFRTFCDF 762
G+NA+ T PT + + W P + SR++ D
Sbjct: 8 VGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDL 67
Query: 763 --GFVILEISPVYPEDCGQYSCR 783
G V L I V +D G Y CR
Sbjct: 68 NKGDVSLIIKNVTLDDHGTYCCR 90
>3pv7_A B7-H6, IG-like domain-containing protein
DKFZP686O24166/DKFZP686I21167; NK cell receptor,
receptor-ligand complex, immune system; HET: NAG; 2.00A
{Homo sapiens} PDB: 3pv6_A*
Length = 248
Score = 40.8 bits (95), Expect = 0.002
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 13/95 (13%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSA 427
L + G ++E+ G Y C +A+ +V LE P + + +
Sbjct: 84 LRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLE-----VVASPASRLLLDQVGMK--ENED 136
Query: 428 HFECTLT---PVNDPELKVEWFHNGKPIFHKNRVK 459
+ C + P + + W + H +
Sbjct: 137 KYMCESSGFYP---EAINITWEKQTQKFPHPIEIS 168
Score = 34.3 bits (78), Expect = 0.29
Identities = 27/203 (13%), Positives = 54/203 (26%), Gaps = 52/203 (25%)
Query: 424 GDSAHFECTLT---PVNDPELKVEWF----HNGKP--IFHKNRVKMVSDFGFVVMD---- 470
D+ C + P+N + + WF K +F + ++
Sbjct: 18 NDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRL 77
Query: 471 --------IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRL-----PSPSQDNLDVP 517
+ +Q ++GEY C P+ ++L P+ V
Sbjct: 78 KSGDASLRLPGIQLEEAGEYRCEVVV-------TPLKAQGTVQLEVVASPASRLLLDQVG 130
Query: 518 EA-GKVHFDCRLE---PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYA-- 571
+ + C P++ + I W + F + G +MD +
Sbjct: 131 MKENEDKYMCESSGFYPEA---INITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVT 187
Query: 572 ----------RDSGEYICRATNK 584
Y C +
Sbjct: 188 SCLKLNSSQEDPGTVYQCVVRHA 210
Score = 31.2 bits (70), Expect = 2.9
Identities = 19/123 (15%), Positives = 31/123 (25%), Gaps = 27/123 (21%)
Query: 920 LTTPTDLTLAESTLAHFECRLT---PTNDPSMTVEW-------------FHNGKALSAGS 963
+ + C + P N SM + W F
Sbjct: 7 MMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAF 66
Query: 964 RIKTINDF-----GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEP 1018
R I G L + + L ++G Y C+ +A + +L V P
Sbjct: 67 RPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVV------ASP 120
Query: 1019 QVS 1021
Sbjct: 121 ASR 123
Score = 30.4 bits (68), Expect = 4.6
Identities = 11/62 (17%), Positives = 16/62 (25%), Gaps = 12/62 (19%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFG------------LVTLSINSLRADDSAIYTCKA 54
+ I W K I G L +NS + D +Y C
Sbjct: 148 EAINITWEKQTQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVV 207
Query: 55 TN 56
+
Sbjct: 208 RH 209
Score = 30.0 bits (67), Expect = 5.7
Identities = 10/70 (14%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 3 PRADPNLKIEWFKNGVPLSLGSRIRSTFDF---GLVTLSINSLRADDSAIYTCKATNLLG 59
D +K+ F + + G +L + ++ +++ Y C+
Sbjct: 47 LTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEEAGEYRCEVVVTPL 106
Query: 60 EAVSTCTLKI 69
+A T L++
Sbjct: 107 KAQGTVQLEV 116
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system;
1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N
2i26_N
Length = 121
Score = 38.9 bits (91), Expect = 0.002
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 21 SLGSRIRSTFDFGL--VTLSINSLRADDSAIYTCKATNLLGEAVSTC 65
S G R T + G +L IN L DS Y CK + G + C
Sbjct: 50 SDGGRYVETVNRGSKSFSLRINDLTVKDSGTYRCKPESRYGSYDAVC 96
Score = 31.5 bits (72), Expect = 0.82
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 938 CRLTPTNDPSMTVEWFHN--GK----ALSAGSR--IKTINDFGFVILEINDVYLRDSGLY 989
C + + T W+ G ++S G R L IND+ ++DSG Y
Sbjct: 22 CVVRDSRCVLSTGYWYRKPPGSRNEESISDGGRYVETVNRGSKSFSLRINDLTVKDSGTY 81
Query: 990 TCKATNKHGEATTSC 1004
CK +++G C
Sbjct: 82 RCKPESRYGSYDAVC 96
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG
BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1
b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Length = 457
Score = 41.4 bits (97), Expect = 0.003
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 12/160 (7%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFG-----MVVLEILGTKIEDTGVYTCRATNKWGQ 391
D + + +G + + + + VL +L + Y C+ +NK
Sbjct: 280 DPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALP 339
Query: 392 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP 451
A I + +P +T + + C + ++ VEW NG+P
Sbjct: 340 APIEKTISKAKGQPREPQVYT--LPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQP 397
Query: 452 IFHKNRVKMVSDFG--FVVMDIAYVQSHD--SGE-YVCRA 486
+ V D F + V G + C
Sbjct: 398 ENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSV 437
Score = 40.2 bits (94), Expect = 0.006
Identities = 42/214 (19%), Positives = 69/214 (32%), Gaps = 36/214 (16%)
Query: 377 DTGVYTCRATNKWGQAEISVNLECVDKSK-------------GQPPKFTSHIKSLEGLKD 423
T Y C +K ++ E K G P F K + L
Sbjct: 204 GTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMI 263
Query: 424 GDSAHFECTLTPV--NDPELKVEWFHNGKPI---FHKNRVKMVSDF--GFVVMDIAYVQS 476
+ C + V DPE+K W+ +G + K R + + V+ + +
Sbjct: 264 SRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDW 323
Query: 477 HDSGEYVCRAWNNFIFIPPFPIFIFH----------QIRLPSPSQDNLDVPEAGKVHFDC 526
+ EY C+ N + P PI Q+ PS+D L +V C
Sbjct: 324 LNGKEYKCKVSNKAL---PAPIEKTISKAKGQPREPQVYTLPPSRDELT---KNQVSLTC 377
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFG 560
++ + ++W NG+P V D
Sbjct: 378 LVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSD 411
Score = 37.2 bits (86), Expect = 0.049
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP +K W+ +GV + + + L++ + Y CK +N
Sbjct: 280 DPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 335
Score = 32.2 bits (73), Expect = 1.7
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ + SLR+ D+A+Y C
Sbjct: 79 AYMELRSLRSADTAVYYC 96
Score = 32.2 bits (73), Expect = 2.0
Identities = 26/123 (21%), Positives = 39/123 (31%), Gaps = 12/123 (9%)
Query: 910 EEDLGKAPEFLTTPTDL-TLAESTLAHFECRLT---PTNDPSMTVEWFHNGKALSAGSRI 965
E LG FL P TL S C + DP + W+ +G +
Sbjct: 242 PELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHE-DPEVKFNWYVDGVEVHNAKTK 300
Query: 966 KTINDFG-----FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQV 1020
+ +L + + Y CK +NK A ++ Q EPQV
Sbjct: 301 PREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ--PREPQV 358
Query: 1021 SAI 1023
+
Sbjct: 359 YTL 361
Score = 31.8 bits (72), Expect = 2.4
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Query: 133 EPSKDATMKIG---KLLCTLTPV--NDPELKVEWFHNGKPI---FHKNRVKMVSDF--GF 182
P T+ I ++ C + V DPE+K W+ +G + K R + +
Sbjct: 254 PPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVV 313
Query: 183 VVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDIELMLKTLVPFTEWF 242
V+ + + + EY C+ V+NK LPA + + G E + TL P +
Sbjct: 314 SVLTVLHQDWLNGKEYKCK--VSNKALPAPIEKTISKAKGQPR---EPQVYTLPPSRDEL 368
Query: 243 VNNK 246
N+
Sbjct: 369 TKNQ 372
Score = 29.8 bits (67), Expect = 9.6
Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 1423 QPPRFVTQIKTQDQLVEMQSTKFECQLAPVG--DPNMKVEWFLNGKPLPHKNRFNPIYDF 1480
P F+ K +D L+ ++ + C + V DP +K W+++G + + +
Sbjct: 247 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY 306
Query: 1481 GYVAMNFGWVY-----PEDSGEYLCRATN 1504
+ + EY C+ +N
Sbjct: 307 NSTYRVVSVLTVLHQDWLNGKEYKCKVSN 335
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A
{Mus musculus}
Length = 270
Score = 40.8 bits (95), Expect = 0.003
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVN-----LECVDKSKGQPPKFTSHIKSLEGLK 422
LEI ++ D+ +Y C ++ W Q L D PP+ S +
Sbjct: 103 LEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEIS 162
Query: 423 DGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
A C T +++ W+ NGK +
Sbjct: 163 HTQKATLVCLATGFYPDHVELSWWVNGKEV 192
Score = 31.2 bits (70), Expect = 3.5
Identities = 23/161 (14%), Positives = 47/161 (29%), Gaps = 28/161 (17%)
Query: 469 MDIAYVQSHDSGEYVCRAWNN-----FIFIPPFPIFIFHQIR--------LPSPSQDNLD 515
++I ++ DS Y+C + N F P + + ++ + PS+ +
Sbjct: 103 LEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEIS 162
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG-SRVKTVYDFGFISLDMDYV----- 569
K C + + W+ NG+ +G D Y
Sbjct: 163 --HTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRL 220
Query: 570 ------YARDSGEYICRATNKWGTA-MTKAKVICKVLTVIV 603
+ + C+ + + K +T IV
Sbjct: 221 RVSATFWQNPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIV 261
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed
death-1, costimulatory, immune system; 2.10A {Homo
sapiens}
Length = 129
Score = 38.4 bits (90), Expect = 0.004
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Query: 16 NGVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
G +++ + DF +S+ R +DS Y C A +
Sbjct: 58 PGQDCRFRVTQLPNGRDF---HMSVVRARRNDSGTYLCGAIS 96
Score = 30.4 bits (69), Expect = 2.4
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Query: 752 TGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSI 805
++ DF + + D G Y C A + + S++ + + +
Sbjct: 65 RVTQLPNGRDF---HMSVVRARRNDSGTYLCGAISLAPKLQIKESLRAELRVTE 115
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI
domain, IG-like domain, extracellular receptor,
neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1
g.16.2.1 PDB: 3ol2_A*
Length = 663
Score = 41.3 bits (95), Expect = 0.004
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 8/102 (7%)
Query: 1774 VYWLKNGKKIIPDI-RYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNA---GEARCEAE 1829
V+W + + +Y + NL LI DSG Y+C++ + A+
Sbjct: 564 VFWKFQNGVLKAESPKYGLMGRKNL---LIFNLSEGDSGVYQCLSEERVKNKTVFQVVAK 620
Query: 1830 LVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSA 1871
V++ K P K AP +V Q E +A + + K
Sbjct: 621 HVLEVKVVP-KPVVAPTLSVVQTEGSRIATKVLVASTKHHHH 661
Score = 40.5 bits (93), Expect = 0.005
Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKA 993
A +C V W L A S + L I ++ DSG+Y C +
Sbjct: 551 AELKCSQKS---NLARVFWKFQNGVLKAESPKYGLMGRK--NLLIFNLSEGDSGVYQCLS 605
Query: 994 TNKHGEATTSCKLTVKGRQGIDVEPQ 1019
+ T ++ K + V P+
Sbjct: 606 EE-RVKNKTVFQVVAKHVLEVKVVPK 630
Score = 35.9 bits (81), Expect = 0.14
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Query: 425 DSAHFECTLTPVNDPELKVEWFHNGKPI-FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
+A +C +V W + + ++ ++ + + DSG Y
Sbjct: 549 GTAELKC---SQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFN---LSEGDSGVYQ 602
Query: 484 CRA 486
C +
Sbjct: 603 CLS 605
Score = 34.0 bits (76), Expect = 0.65
Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 7/59 (11%)
Query: 144 KLLCTLTPVNDPELKVEWFHNGKPI-FHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQ 201
+L C +V W + + ++ ++ + + DSG Y C
Sbjct: 552 ELKC---SQKSNLARVFWKFQNGVLKAESPKYGLMGRKNLLIFN---LSEGDSGVYQCL 604
Score = 32.8 bits (73), Expect = 1.2
Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 7/66 (10%)
Query: 1440 MQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKN-RFNPIYDFGYVAMNFGWVYPEDSGEY 1498
+ + +C +V W L ++ ++ + + N + DSG Y
Sbjct: 548 GGTAELKCSQKS---NLARVFWKFQNGVLKAESPKYGLMGRKNLLIFN---LSEGDSGVY 601
Query: 1499 LCRATN 1504
C +
Sbjct: 602 QCLSEE 607
Score = 32.4 bits (72), Expect = 1.6
Identities = 12/96 (12%), Positives = 25/96 (26%), Gaps = 2/96 (2%)
Query: 341 TVEFLYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLEC 400
V + + ++A + L I D+GVY C + + + +
Sbjct: 563 RVFWKFQNGVLKAESPKYGLMGRK--NLLIFNLSEGDSGVYQCLSEERVKNKTVFQVVAK 620
Query: 401 VDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPV 436
PK +G + +
Sbjct: 621 HVLEVKVVPKPVVAPTLSVVQTEGSRIATKVLVAST 656
Score = 32.0 bits (71), Expect = 2.4
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 12/102 (11%)
Query: 10 KIEWFKNGVPLSLGSRIRS-TFDFGLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLK 68
++ W L S L+ I +L DS +Y C + E V T+
Sbjct: 563 RVFWKFQNGVLKAESPKYGLMGRKNLL---IFNLSEGDSGVYQCLSE----ERVKNKTV- 614
Query: 69 IEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPV 110
+ L +P V+ + + V
Sbjct: 615 ---FQVVAKHVLEVKVVPKPVVAPTLSVVQTEGSRIATKVLV 653
Score = 30.5 bits (67), Expect = 5.9
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 1667 PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 1718
L + W ++ + + + + L++ + DSGV+ ++E R
Sbjct: 560 NLARVFWKFQNGVLKAESP--KYGLMGRKNLLIFNLSEGDSGVYQCLSEERV 609
Score = 30.5 bits (67), Expect = 7.0
Identities = 16/86 (18%), Positives = 22/86 (25%), Gaps = 9/86 (10%)
Query: 520 GKVHFDCRLEPKSDPTMRIDWFFNGRP--FATGSRVKTVYDFGFISLDMDYVYARDSGEY 577
G C + R+ W F + I + DSG Y
Sbjct: 549 GTAELKCSQKS---NLARVFWKFQNGVLKAESPKYGLMGRKNLLIFN----LSEGDSGVY 601
Query: 578 ICRATNKWGTAMTKAKVICKVLTVIV 603
C + + V VL V V
Sbjct: 602 QCLSEERVKNKTVFQVVAKHVLEVKV 627
Score = 30.1 bits (66), Expect = 7.8
Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
Query: 603 VEWFYNGKKLP-HGHRYRTFHDFGIVILDILYCYEENSGVYECRATNK 649
V W + L +Y ++I ++ E +SGVY+C + +
Sbjct: 564 VFWKFQNGVLKAESPKYGLMGRKNLLIFNL---SEGDSGVYQCLSEER 608
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG,
inhibitory receptor, disulfide, immune system; 1.70A
{Homo sapiens}
Length = 196
Score = 39.4 bits (92), Expect = 0.004
Identities = 25/169 (14%), Positives = 41/169 (24%), Gaps = 15/169 (8%)
Query: 331 SLIPVGDQ--------TMTVEF-LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
S+I G+ E+ L + R + I + G Y
Sbjct: 14 SVISWGNSVTIWCQGTLEAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRY 73
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL 441
C + G ++ S LE V P ++ + G S C D
Sbjct: 74 RCYYRSPVGWSQPSDPLELVMTGAYSKPTLSAL--PSPLVTSGKSVTLLCQSRSPMD--- 128
Query: 442 KVEWFHNGKPIFHKNRVKMVSDFGFVVM-DIAYVQSHDSGEYVCRAWNN 489
++ V S G Y C + +
Sbjct: 129 TFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHG 177
Score = 37.5 bits (87), Expect = 0.020
Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 42/127 (33%)
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTS-------------------ASMKVQGKRSIIL 807
I + + G+Y C + G + S S V +S+ L
Sbjct: 60 FSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSPLVTSGKSVTL 119
Query: 808 ESQLPKGMEVFISFHE-----------------------ISPVYPEDCGQYSCRAYNDYG 844
Q M+ F+ E +SPV G Y C + + +
Sbjct: 120 LCQSRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179
Query: 845 EAVTSAS 851
+ S
Sbjct: 180 HYLLSHP 186
Score = 34.8 bits (80), Expect = 0.15
Identities = 23/113 (20%), Positives = 33/113 (29%), Gaps = 19/113 (16%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG--EA 1824
T Y L + P R LE N I + +G Y C + G +
Sbjct: 27 QGTLEAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQP 86
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
ELV+ + + P V G +VTL C+
Sbjct: 87 SDPLELVMTGAYSKPTLSALPS-----------------PLVTSGKSVTLLCQ 122
Score = 31.0 bits (70), Expect = 2.4
Identities = 9/78 (11%), Positives = 18/78 (23%), Gaps = 4/78 (5%)
Query: 720 REGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGF-VILEISPVYPEDCG 778
G++ + + P +SPV G
Sbjct: 112 TSGKSVTLLCQ---SRSPMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGG 168
Query: 779 QYSCRAYNDYGEAVTSAS 796
Y C + + + + S
Sbjct: 169 TYRCFSSHGFSHYLLSHP 186
Score = 30.6 bits (69), Expect = 4.1
Identities = 19/157 (12%), Positives = 37/157 (23%), Gaps = 11/157 (7%)
Query: 241 WFVNNKPLPAGAKFKTTHDFGYVA-LDIVGAYAEDSGIYTVKATNSKGSATTSGTLKCLE 299
P P + + A I + +G Y + G + S L+
Sbjct: 37 LDKEESPAPWD--RQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLE--- 91
Query: 300 RLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVEFLYNGKPIEASHRIRT 359
L + Y +L ++ G+ T
Sbjct: 92 -LVMTGAYSKPTLSALPSPLVTSGKSVTLLCQS---RSPMDTFLLCKERAAHPLLCLRSE 147
Query: 360 VHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
A + G Y C +++ + +S
Sbjct: 148 HGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLS 184
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like
folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A
2dyp_D 2otp_A 3q2c_A
Length = 198
Score = 39.4 bits (92), Expect = 0.004
Identities = 32/172 (18%), Positives = 50/172 (29%), Gaps = 19/172 (11%)
Query: 331 SLIPVGDQ--------TMTVEF-LY-NGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGV 380
S+I G T E+ LY K RI I E TG
Sbjct: 14 SVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVK-KGQFPIPSITWEHTGR 72
Query: 381 YTCRA-TNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDP 439
Y C ++ G++E S LE V P ++ + + G + +C D
Sbjct: 73 YRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPV--VNSGGNVTLQCDSQVAFD- 129
Query: 440 ELKVEWFHNG--KPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
G + N + + V Y C A+++
Sbjct: 130 --GFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179
Score = 31.7 bits (72), Expect = 1.4
Identities = 19/129 (14%), Positives = 29/129 (22%), Gaps = 44/129 (34%)
Query: 767 LEISPVYPEDCGQYSCRAYNDYG------EAVTSASMKVQGKRSIIL--ESQLPKGMEV- 817
I + E G+Y C +D + + K ++ + G V
Sbjct: 60 FPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQPSPVVNSGGNVT 119
Query: 818 --------FISFH---------------------------EISPVYPEDCGQYSCRAYND 842
F F + PV P Y C AY+
Sbjct: 120 LQCDSQVAFDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDS 179
Query: 843 YGEAVTSAS 851
S
Sbjct: 180 NSPYEWSLP 188
Score = 30.2 bits (68), Expect = 4.7
Identities = 13/54 (24%), Positives = 16/54 (29%), Gaps = 8/54 (14%)
Query: 743 WFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSAS 796
N +P GS F + PV P Y C AY+ S
Sbjct: 143 QCLNSQPHARGSSRAIF--------SVGPVSPSRRWWYRCYAYDSNSPYEWSLP 188
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta
barrel, immunoglobulin fold, IGV domain, TIM, immune
system; 1.50A {Mus musculus}
Length = 115
Score = 38.0 bits (88), Expect = 0.004
Identities = 11/81 (13%), Positives = 19/81 (23%), Gaps = 19/81 (23%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIF-----------------HKNRVKMVSDF-- 464
G C + + + W +R ++ +
Sbjct: 12 GHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISE 71
Query: 465 GFVVMDIAYVQSHDSGEYVCR 485
G V + I D G Y C
Sbjct: 72 GNVSLTIENTVVGDGGPYCCV 92
Score = 32.6 bits (74), Expect = 0.27
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 19/74 (25%)
Query: 938 CRLTPTNDPSMTVEWF---------------HNGKALSAGS----RIKTINDFGFVILEI 978
C + + + W NG ++ ++K G V L I
Sbjct: 19 CIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTI 78
Query: 979 NDVYLRDSGLYTCK 992
+ + D G Y C
Sbjct: 79 ENTVVGDGGPYCCV 92
Score = 32.3 bits (73), Expect = 0.37
Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 19/76 (25%)
Query: 145 LLCTLTPVNDPELKVEWFHNGKPIF-----------------HKNRVKMVSDF--GFVVM 185
L C + + + W +R ++ + G V +
Sbjct: 17 LPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSL 76
Query: 186 DIAYVQSHDSGEYVCQ 201
I D G Y C
Sbjct: 77 TIENTVVGDGGPYCCV 92
Score = 32.3 bits (73), Expect = 0.38
Identities = 13/90 (14%), Positives = 21/90 (23%), Gaps = 19/90 (21%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRVKTVYD-- 558
S + V C + + W + G V +
Sbjct: 3 SHTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSR 62
Query: 559 --------FGFISLDMDYVYARDSGEYICR 580
G +SL ++ D G Y C
Sbjct: 63 YQLKGNISEGNVSLTIENTVVGDGGPYCCV 92
Score = 31.9 bits (72), Expect = 0.54
Identities = 9/70 (12%), Positives = 17/70 (24%), Gaps = 19/70 (27%)
Query: 3 PRADPNLKIEWFKNGVPLSLGS-------------------RIRSTFDFGLVTLSINSLR 43
+ + W S +++ G V+L+I +
Sbjct: 23 THLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTV 82
Query: 44 ADDSAIYTCK 53
D Y C
Sbjct: 83 VGDGGPYCCV 92
Score = 30.7 bits (69), Expect = 1.5
Identities = 12/97 (12%), Positives = 21/97 (21%), Gaps = 27/97 (27%)
Query: 1053 PPVFTSQLQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFAT---------GSRV 1103
+ +P C + + W + G V
Sbjct: 4 HTAVQGLAGHPVTLP--------CIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTV 55
Query: 1104 KTVYD----------FGFISLDMDYVYARDSGEYICR 1130
+ G +SL ++ D G Y C
Sbjct: 56 THQRNSRYQLKGNISEGNVSLTIENTVVGDGGPYCCV 92
Score = 30.3 bits (68), Expect = 2.0
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 356 RIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLE 399
+++ + G V L I T + D G Y C + LE
Sbjct: 64 QLKGNISEGNVSLTIENTVVGDGGPYCCVVEIPGAFHFVDYMLE 107
Score = 29.2 bits (65), Expect = 4.7
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 1337 GFVSLDIDYVYPEDQGEYVCR 1357
G VSL I+ D G Y C
Sbjct: 72 GNVSLTIENTVVGDGGPYCCV 92
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex,
immunoglobulin fold, immune receptor, membr immune
system; HET: NAG; 2.55A {Homo sapiens}
Length = 268
Score = 40.0 bits (93), Expect = 0.005
Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEI--SVNLECVDKSKG-QPPKFTSHIKSLEGLKDG 424
L+I T+ D+ VY C + L ++ K PP+ S +
Sbjct: 102 LKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHT 161
Query: 425 DSAHFECTLTPVNDPELKVEWFHNGKPI 452
A C T +++ W+ NGK +
Sbjct: 162 QKATLVCLATGFYPDHVELSWWVNGKEV 189
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune
system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Length = 110
Score = 37.5 bits (87), Expect = 0.005
Identities = 20/99 (20%), Positives = 29/99 (29%), Gaps = 25/99 (25%)
Query: 424 GDSAHFECTLTPVNDP---ELKVEW----------FHNGKPIF------HKNRVKMVSDF 464
++A C + EL V W + GK F + R SD
Sbjct: 9 NETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDS 68
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQ 503
+ + +Q D G Y C P + HQ
Sbjct: 69 --WTLRLHNLQIKDKGLYQCI----IHHKKPTGMIRIHQ 101
Score = 36.7 bits (85), Expect = 0.010
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 34/107 (31%)
Query: 118 VECKENENVHFDCRVEPSKDATMKIGKLLCTLTPVNDPELKVEW----------FHNGKP 167
++ NE C+ S++ ++ EL V W + GK
Sbjct: 4 IQAYFNETADLPCQFANSQNQSLS--------------ELVVFWQDQENLVLNEVYLGKE 49
Query: 168 IF------HKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCQWFVNNKP 208
F + R SD + + +Q D G Y C +++K
Sbjct: 50 KFDSVHSKYMGRTSFDSDS--WTLRLHNLQIKDKGLYQCI--IHHKK 92
Score = 30.2 bits (68), Expect = 2.1
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 25 RIRSTFDFGLVTLSINSLRADDSAIYTC 52
R++FD TL +++L+ D +Y C
Sbjct: 59 MGRTSFDSDSWTLRLHNLQIKDKGLYQC 86
Score = 29.8 bits (67), Expect = 2.4
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 16/59 (27%)
Query: 1772 LDVYWLKNGKKIIPDI------------RYK---TLEEDNLFTLLIIEAVVEDSGAYEC 1815
L V+W ++ ++ +Y + + D+ +TL + ++D G Y+C
Sbjct: 29 LVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDS-WTLRLHNLQIKDKGLYQC 86
Score = 29.8 bits (67), Expect = 2.5
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 340 MTVEFLYNGKP----IEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEIS 395
+ + +Y GK + + + RT L + +I+D G+Y C +K I
Sbjct: 39 LVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTLRLHNLQIKDKGLYQCIIHHKKPTGMIR 98
Query: 396 VNLECVD 402
++ +
Sbjct: 99 IHQMNSE 105
Score = 29.0 bits (65), Expect = 4.8
Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 22/97 (22%)
Query: 934 AHFECRLTPTNDPS---MTVEW----------FHNGK----ALSAGSRIKTINDFGFVIL 976
A C+ + + S + V W + GK ++ + +T D L
Sbjct: 12 ADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDSDSWTL 71
Query: 977 EINDVYLRDSGLYTC--KATNKHGEAT---TSCKLTV 1008
++++ ++D GLY C G + +L+V
Sbjct: 72 RLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSV 108
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN;
1.75A {Gallus gallus}
Length = 231
Score = 39.2 bits (91), Expect = 0.007
Identities = 23/177 (12%), Positives = 43/177 (24%), Gaps = 31/177 (17%)
Query: 392 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPE-LKVEWFHNGK 450
+ I + PP S L A C + + L V W
Sbjct: 11 SPIQLYA--------IPP-------SPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKS 55
Query: 451 PIFHKNRVKMVSDF-----GFVVMDIAYVQSHDSGEYVCRAWNNFIFIP-------PFPI 498
+ + + F + ++ + C + + +P
Sbjct: 56 GNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPLPLSKSVYRNTGP 115
Query: 499 FIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKT 555
I +P + L +V C + + I W + R V T
Sbjct: 116 TTPPLIYPFAPHPEELS---LSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTT 169
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain,
integrin, allosteric mobility, cell adhesi immune
system; HET: NAG; 2.10A {Homo sapiens}
Length = 196
Score = 38.5 bits (89), Expect = 0.009
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDF--GLVTLSINSLRADDSAIYTCKATNLLG 59
+L + + L S ++T ++ + R D A ++C+A L
Sbjct: 120 ASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174
Score = 36.6 bits (84), Expect = 0.045
Identities = 21/171 (12%), Positives = 35/171 (20%), Gaps = 27/171 (15%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
G S C+ +E R ++DI + V
Sbjct: 17 GGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLA-----RQLVDI----REPETQPV 67
Query: 484 CRAWNN--------FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLE-PKSDP 534
C I P ++ L P CR+
Sbjct: 68 CFFRCARRTLQARGLIRTFQRP----DRVELMPLPP---WQPVGENFTLSCRVPGAGPRA 120
Query: 535 TMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYAR--DSGEYICRATN 583
++ + + S L + R + CRA
Sbjct: 121 SLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAEL 171
Score = 35.4 bits (81), Expect = 0.082
Identities = 17/159 (10%), Positives = 31/159 (19%), Gaps = 25/159 (15%)
Query: 936 FECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATN 995
C +E G ++ ++ D+ C
Sbjct: 22 LNCSTNCPRPERGGLETSLRRNGTQRGL--------RWLARQLVDI-REPETQPVCFFRC 72
Query: 996 KHGEATTSCKLTVKGR-QGIDVEPQVSAIFANATKNIQ----------KLEEALYRKDEL 1044
+ R +++ P + L L R +
Sbjct: 73 ARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQE 132
Query: 1045 IP----DEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE 1079
+ E P + G F CR E
Sbjct: 133 LIRRSFAGEPPRARGAVLTATVLARREDHGAN-FSCRAE 170
Score = 32.0 bits (72), Expect = 1.2
Identities = 7/82 (8%), Positives = 18/82 (21%), Gaps = 9/82 (10%)
Query: 719 LREGENAHFEARLTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCG 778
+ G + + +E + G R+ ++ + E
Sbjct: 14 VERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLAR--------QLVDI-REPET 64
Query: 779 QYSCRAYNDYGEAVTSASMKVQ 800
Q C ++
Sbjct: 65 QPVCFFRCARRTLQARGLIRTF 86
Score = 31.6 bits (71), Expect = 1.8
Identities = 8/89 (8%), Positives = 18/89 (20%), Gaps = 18/89 (20%)
Query: 1792 LEEDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQ 1851
+ + + + E C + + +
Sbjct: 45 TQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRP--------------- 89
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ + G TL CR+ G
Sbjct: 90 -DRVELM--PLPPWQPVGENFTLSCRVPG 115
Score = 30.4 bits (68), Expect = 3.5
Identities = 20/193 (10%), Positives = 37/193 (19%), Gaps = 60/193 (31%)
Query: 1427 FVTQIKTQDQLVEM-QSTKFECQLAPVGDPNMKVEWFLNGKPL---PHKNRFNPIYDFGY 1482
F ++ + VE S C +E L + D
Sbjct: 3 FWADLQPRVAFVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQ-LVD--- 58
Query: 1483 VAMNFGWVYPEDSGEYLCRATNLYGMDETRAILKTTGKPGIIYESQLPKGMKSIEKIREM 1542
E + +C + R +++T +P
Sbjct: 59 --------IREPETQPVCFFRCARRTLQARGLIRTFQRP--------------------- 89
Query: 1543 EASWQHTPEQLVEDEKPKEAPVFVSQPEAQKVQEGEPARF-CTRVTGYPRPR--VMWLIN 1599
+ + P GE C PR + L
Sbjct: 90 ------------------DRVELMPLP--PWQPVGENFTLSCRVPGAGPRASLTLTLLRG 129
Query: 1600 GHTIVNEIVRKIT 1612
++
Sbjct: 130 AQELIRRSFAGEP 142
Score = 30.0 bits (67), Expect = 5.1
Identities = 16/172 (9%), Positives = 36/172 (20%), Gaps = 43/172 (25%)
Query: 516 VPEAGKVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSG 575
V G + +C ++ G R +D+
Sbjct: 14 VERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLA-----RQLVDI----REPET 64
Query: 576 EYICRATNKWGTAMTKAKVI--------------------------CKVLTV------IV 603
+ +C T + + C+V +
Sbjct: 65 QPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTL 124
Query: 604 EWFYNGKKLPHG--HRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSD 653
++L ++ +L E++ + CRA
Sbjct: 125 TLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLRPH 176
Score = 29.7 bits (66), Expect = 6.7
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 737 PKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEIS-PVYPEDCG-QYSCRAYND 787
L + + + S +L + ED G +SCRA D
Sbjct: 120 ASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELD 172
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane,
disulfide bond, glycoprotein, immunoglobulin domain,
membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A
{Homo sapiens}
Length = 589
Score = 39.6 bits (92), Expect = 0.011
Identities = 11/92 (11%), Positives = 22/92 (23%), Gaps = 8/92 (8%)
Query: 923 PTDLTLAESTLAHFECRLTPTN-----DPSMTVEWFHNGKALSAGSRIKTINDFGFVILE 977
P + + C L + + W N + + IN +
Sbjct: 10 PESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPK-EQYTIINR-TASSVT 67
Query: 978 INDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
D+ + TC +T+
Sbjct: 68 FTDI-ASLNIQLTCNILTFGQLEQNVYGITII 98
Score = 38.4 bits (89), Expect = 0.026
Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 3/103 (2%)
Query: 1738 GGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNL 1797
G + P S + + S V L + W N IP +Y +
Sbjct: 6 GYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHF-TIPKEQYTIINRTA- 63
Query: 1798 FTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGK 1840
+ + + + C + + + + S P K
Sbjct: 64 -SSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEK 105
Score = 37.7 bits (87), Expect = 0.041
Identities = 27/194 (13%), Positives = 48/194 (24%), Gaps = 34/194 (17%)
Query: 1563 PVFVSQPEAQKVQEGEPARF-------CTRVTGYPRPRVMWLING-------HTIVNEIV 1608
P PE+ VQ C ++W N +TI+N
Sbjct: 4 PCGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTIINRTA 63
Query: 1609 RKITATETTEMEHKGKIQER------------VVDASEKPAKPPVFTKKIQPCRAFEQDQ 1656
+T T+ + + + + P KP + C E +
Sbjct: 64 SSVTFTDIASLNIQLTCNILTFGQLEQNVYGITIISGLPPEKPKNLS-----CIVNEGKK 118
Query: 1657 A--RFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 1714
++ + E + D + + S + + V A
Sbjct: 119 MRCEWDGGRETHLETNFTLKSE-WATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEA 177
Query: 1715 ENRGGKAKCSANLV 1728
EN GK
Sbjct: 178 ENALGKVTSDHINF 191
Score = 34.6 bits (79), Expect = 0.32
Identities = 8/69 (11%), Positives = 16/69 (23%), Gaps = 3/69 (4%)
Query: 1 VEPRADPNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
++ I W N + VT + + + TC
Sbjct: 32 MDYFHVNANYIVWKTNHFTIPKEQYTIINRTASSVT--FTDIASLN-IQLTCNILTFGQL 88
Query: 61 AVSTCTLKI 69
+ + I
Sbjct: 89 EQNVYGITI 97
Score = 33.4 bits (76), Expect = 0.76
Identities = 11/103 (10%), Positives = 27/103 (26%), Gaps = 11/103 (10%)
Query: 1428 VTQIKTQDQLVEM-QSTKFECQLAP-----VGDPNMKVEWFLNGKPLPHKNRFNPIYDFG 1481
I + +V++ + C L + W N +P K ++ I
Sbjct: 5 CGYISPESPVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIP-KEQYTIINRTA 63
Query: 1482 YVAMNFGWVYPEDSGEYLCRATNLYGMDET--RAILKTTGKPG 1522
+ + C +++ + + P
Sbjct: 64 SSVTFTD--IASLNIQLTCNILTFGQLEQNVYGITIISGLPPE 104
Score = 32.7 bits (74), Expect = 1.6
Identities = 6/69 (8%), Positives = 19/69 (27%), Gaps = 1/69 (1%)
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 1720
+++ I W F I + I + S+ + ++ + +
Sbjct: 32 MDYFHVNANYIVWKTNHFTIPKE-QYTIINRTASSVTFTDIASLNIQLTCNILTFGQLEQ 90
Query: 1721 AKCSANLVV 1729
++
Sbjct: 91 NVYGITIIS 99
Score = 30.0 bits (67), Expect = 8.4
Identities = 6/86 (6%), Positives = 17/86 (19%), Gaps = 8/86 (9%)
Query: 720 REGENAHFEARLTPTD-----DPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYP 774
+ N L + W N + + + + +
Sbjct: 16 QLHSNFTAVCVLKEKCMDYFHVNANYIVWKTNHFTIPKEQYTII--NRTASSVTFTDIAS 73
Query: 775 EDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ Q +C + +
Sbjct: 74 LN-IQLTCNILTFGQLEQNVYGITII 98
>3ux9_B SCFV antibody; five helices, long loop connecting helix,
hydrophobic intera cytokine-immune system complex;
2.80A {Homo sapiens}
Length = 256
Score = 38.8 bits (91), Expect = 0.011
Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS+ ++ +L+I L+++D A Y C
Sbjct: 67 GSKSGTSA-----SLAITGLQSEDEADYYC 91
Score = 33.8 bits (78), Expect = 0.44
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 215 LQMNSLRAEDTAVYYC 230
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain,
glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens}
PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A
1f6a_B 1g84_A
Length = 323
Score = 38.9 bits (90), Expect = 0.012
Identities = 30/225 (13%), Positives = 55/225 (24%), Gaps = 35/225 (15%)
Query: 1670 TIKWFREDFPITS-----SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 1724
I W + + S + ST+S L + Q + +G + S
Sbjct: 42 QITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDS 101
Query: 1725 ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD----VYWLKNG 1780
+ +G + PS + + + + P + W +
Sbjct: 102 TKKCADSNPRGVSAYLSRPSPFD------LFIRKSPTITCLVVDLAPSKGTVQLTWSRAS 155
Query: 1781 KKIIPDIRYKTLEEDN-----LFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSK 1835
K + K ++ N TL + + Y+C + S
Sbjct: 156 GKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSG 215
Query: 1836 KAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
AP V + TL C I
Sbjct: 216 PRA---------------APEVYAFATPEWPGSRDKRTLACLIQN 245
Score = 38.1 bits (88), Expect = 0.025
Identities = 33/222 (14%), Positives = 62/222 (27%), Gaps = 14/222 (6%)
Query: 241 WFVNNKPLPAGAKFKTTHDFG--YVA---LDIVGAYAEDSGIYTVKATNSKGSATTSGTL 295
W + + + +T G L + + YT + T +G T
Sbjct: 45 WLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVT-YQGHTFEDSTK 103
Query: 296 KCLERLFVNHNYPLFSLQFQHLSNLSEGEIAHFEASLIPVGDQTMTVE-FLYNGKPIEAS 354
KC + + L L I + T+ + +GKP+ S
Sbjct: 104 KCADSNPRGVSAYLSRPSPFDLFIRKSPTIT-CLVVDLAPSKGTVQLTWSRASGKPVNHS 162
Query: 355 HRIRTVHA---FGMV-VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPK 410
R + L + + Y CR T+ + + + P
Sbjct: 163 TRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEV 222
Query: 411 FTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ + E D C + ++ V+W HN +
Sbjct: 223 YA--FATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQL 262
Score = 34.3 bits (78), Expect = 0.38
Identities = 26/218 (11%), Positives = 50/218 (22%), Gaps = 22/218 (10%)
Query: 408 PPK-FTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI---FHKNRVKMVSD 463
PP G + C ++ +++ W +G+ + +
Sbjct: 7 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGE 66
Query: 464 FGFV--VMDIAYVQSHDSGEYVCR-AWNNFIFIPPFPIFIFHQIRLPSPSQ---DNLDVP 517
+ ++ Y C+ + F R S D+
Sbjct: 67 LASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLF 126
Query: 518 EAGKVHFDCRLE--PKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFIS-----LDMDYVY 570
C + S T+++ W S K L +
Sbjct: 127 IRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRD 186
Query: 571 ARDSGEYICRATNKW-----GTAMTKAKVICKVLTVIV 603
+ Y CR T+ + TK V
Sbjct: 187 WIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYA 224
Score = 31.6 bits (71), Expect = 2.4
Identities = 10/57 (17%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 5 ADPNLKIEWFK-NGVPLSLGSRIRSTFDFGLV----TLSINSLRADDSAIYTCKATN 56
+ +++ W + +G P++ +R G + TL + + + Y C+ T+
Sbjct: 143 SKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTH 199
Score = 31.2 bits (70), Expect = 3.0
Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 20/116 (17%)
Query: 1770 KPLDVYWLKNGKKIIPDIR-YKTLEEDNLFT----LLIIEAVVEDSGAYECVAMNNAGEA 1824
+ + WL++G+ + D+ T +E L + L + + Y C
Sbjct: 39 GTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTC--------- 89
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
V + + + A ++ + T+ C +
Sbjct: 90 ------QVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVD 139
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural
cytotoxicity receptor, NK cell receptor, immunoglobulin
fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4
b.1.1.4
Length = 242
Score = 38.3 bits (89), Expect = 0.013
Identities = 30/169 (17%), Positives = 49/169 (28%), Gaps = 20/169 (11%)
Query: 331 SLIPVGDQ--------TMTVEF-LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
++P Q VE+ L+ + A R + V I G Y
Sbjct: 16 FMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQY 75
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL 441
+C +E S L+ V P + H + G+ F C L
Sbjct: 76 SCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG--PEVISGEKVTFYCRLDTATS--- 130
Query: 442 KVEWFHNGKP-IFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
G+ + K+ ++F + V + G Y C N
Sbjct: 131 MFLLLKEGRSSHVQRGYGKVQAEF-----PLGPVTTAHRGTYRCFGSYN 174
Score = 37.6 bits (87), Expect = 0.025
Identities = 31/184 (16%), Positives = 51/184 (27%), Gaps = 15/184 (8%)
Query: 405 KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
+ PK + + C ++ + G F +R K
Sbjct: 2 QQTLPKPFIWAEPHFMVPKEKQVTICCQGNY---GAVEYQLHFEGSL-FAVDRPKPPERI 57
Query: 465 GFVVMDIAYVQSHDSGEYVCRAWNNFIFIPP-FPIFIFHQIRLPSPS---QDNLDVPEAG 520
V I + S +G+Y C ++ P + + +P+ +V
Sbjct: 58 NKVKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGE 117
Query: 521 KVHFDCRLEPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICR 580
KV F CRL+ T GR R F + V G Y C
Sbjct: 118 KVTFYCRLD---TATSMFLLLKEGRSSHV-QRGYGKVQAEFP---LGPVTTAHRGTYRCF 170
Query: 581 ATNK 584
+
Sbjct: 171 GSYN 174
Score = 36.4 bits (84), Expect = 0.062
Identities = 16/110 (14%), Positives = 24/110 (21%), Gaps = 37/110 (33%)
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTSASMK-------------------VQGKRSIILES 809
I + GQYSC + S + V +
Sbjct: 64 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYC 123
Query: 810 QLPKGMEVFISFHE------------------ISPVYPEDCGQYSCRAYN 841
+L +F+ E + PV G Y C
Sbjct: 124 RLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSY 173
Score = 34.9 bits (80), Expect = 0.20
Identities = 23/114 (20%), Positives = 29/114 (25%), Gaps = 21/114 (18%)
Query: 1767 SATKPLDVYWL-KNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG--E 1823
Y L G + R K E N I + +G Y C+ E
Sbjct: 29 QGNYGAVEYQLHFEGS-LFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSE 87
Query: 1824 ARCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
+LVV + PG V G VT CR
Sbjct: 88 PSNLLDLVVTEMYDTPTLSVHPG-----------------PEVISGEKVTFYCR 124
Score = 29.9 bits (67), Expect = 7.2
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 820 SFHEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 855
F+ I + GQYSC + S + +
Sbjct: 61 KFY-IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLV 95
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein
receptor, immunoglobulin V domain fold, symmetric dimer;
1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B
2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B
1p6a_B
Length = 126
Score = 36.8 bits (85), Expect = 0.013
Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 26/88 (29%)
Query: 424 GDSAHFECTLT--PVNDPELKVEWF---------------HNGKPIFH------KNRVKM 460
G++A+ C T P + L +EW ++G I+ K RV
Sbjct: 20 GETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHF 79
Query: 461 VSDF---GFVVMDIAYVQSHDSGEYVCR 485
S+ G +++ +Q D G Y C+
Sbjct: 80 TSNDLKSGDASINVTNLQLSDIGTYQCK 107
Score = 35.2 bits (81), Expect = 0.051
Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 26/101 (25%)
Query: 934 AHFECRLT--PTNDPSMTVEWF---------------HNGKALSAGS------RIKTIND 970
A+ C+ T P + + +EW ++G + R+ ++
Sbjct: 23 AYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSN 82
Query: 971 F---GFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
G + + ++ L D G Y CK G A L V
Sbjct: 83 DLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVV 123
Score = 33.7 bits (77), Expect = 0.14
Identities = 16/121 (13%), Positives = 38/121 (31%), Gaps = 31/121 (25%)
Query: 510 SQDNLDVPEAGKVHFDCRL--EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI----- 562
++ ++ + + C+ P+ + I+W + +V +Y I
Sbjct: 11 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYY 70
Query: 563 -------------------SLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIV 603
S+++ + D G Y C+ + K+ L V+V
Sbjct: 71 PDLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKK--APGVANKKIH---LVVLV 125
Query: 604 E 604
+
Sbjct: 126 K 126
Score = 32.9 bits (75), Expect = 0.30
Identities = 21/90 (23%), Positives = 31/90 (34%), Gaps = 28/90 (31%)
Query: 145 LLCTLT--PVNDPELKVEWF---------------HNGKPIFH------KNRVKMVSDF- 180
L C T P + L +EW ++G I+ K RV S+
Sbjct: 25 LPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDL 84
Query: 181 --GFVVMDIAYVQSHDSGEYVCQWFVNNKP 208
G +++ +Q D G Y C V P
Sbjct: 85 KSGDASINVTNLQLSDIGTYQC--KVKKAP 112
Score = 31.8 bits (72), Expect = 0.63
Identities = 9/36 (25%), Positives = 15/36 (41%)
Query: 33 GLVTLSINSLRADDSAIYTCKATNLLGEAVSTCTLK 68
G ++++ +L+ D Y CK G A L
Sbjct: 87 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLV 122
Score = 31.4 bits (71), Expect = 0.93
Identities = 9/40 (22%), Positives = 17/40 (42%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDK 403
G + + ++ D G Y C+ G A ++L + K
Sbjct: 87 GDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVK 126
Score = 30.6 bits (69), Expect = 1.6
Identities = 14/115 (12%), Positives = 33/115 (28%), Gaps = 28/115 (24%)
Query: 1061 QDNLDVPEAGKVHFDCRL--EPKSDPTMRIDWFFNGRPFATGSRVKTVYDFGFI------ 1112
++ ++ + + C+ P+ + I+W + +V +Y I
Sbjct: 12 EEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYP 71
Query: 1113 ------------------SLDMDYVYARDSGEYICRATN--KWGTAMTKAKVICK 1147
S+++ + D G Y C+ V+ K
Sbjct: 72 DLKGRVHFTSNDLKSGDASINVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLVK 126
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology,
IGSF, cell SU receptor signalling, glycosylation,
membrane protein; HET: NAG; 2.90A {Homo sapiens}
Length = 118
Score = 36.3 bits (84), Expect = 0.015
Identities = 18/111 (16%), Positives = 30/111 (27%), Gaps = 22/111 (19%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDPSMT---VEWFHNGKALS---------------- 960
+ PT + C L N + W +G++ S
Sbjct: 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESK 63
Query: 961 --AGSRIKTINDFGFVILEINDVYLRDSGLYTCK-ATNKHGEATTSCKLTV 1008
+ + L + + + D G YTC T G + L V
Sbjct: 64 RLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRV 114
Score = 35.2 bits (81), Expect = 0.041
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 21/83 (25%)
Query: 424 GDSAHFECTLTPVNDPELK---VEWFHNGKP----IFHKN---------RVKMVSD-FGF 466
GDS C L N + W +G+ +FH+ R++ V+ G
Sbjct: 15 GDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGA 74
Query: 467 VVMD----IAYVQSHDSGEYVCR 485
+ + + ++ D G Y C
Sbjct: 75 ELRNASLRMFGLRVEDEGNYTCL 97
Score = 35.2 bits (81), Expect = 0.048
Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 28/115 (24%)
Query: 129 DCRVEPSKDATMKIGK---LLCTLTPVNDPELK---VEWFHNGKP----IFHKN------ 172
D V+ +G L C L N + W +G+ +FH+
Sbjct: 1 DVVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYS 60
Query: 173 ---RVKMVSD-FGFVVMD----IAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTH 219
R++ V+ G + + + ++ D G Y C FV P G++
Sbjct: 61 ESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCL-FVTF---PQGSRSVDIW 111
Score = 33.7 bits (77), Expect = 0.15
Identities = 12/73 (16%), Positives = 20/73 (27%), Gaps = 18/73 (24%)
Query: 2 EPRADPNLKIEWFKNGVP-----------LSLGSRIRSTF-------DFGLVTLSINSLR 43
++ W ++G S R F + +L + LR
Sbjct: 28 NMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLR 87
Query: 44 ADDSAIYTCKATN 56
+D YTC
Sbjct: 88 VEDEGNYTCLFVT 100
Score = 31.7 bits (72), Expect = 0.71
Identities = 18/69 (26%), Positives = 25/69 (36%), Gaps = 6/69 (8%)
Query: 336 GDQTMTVEFLYNGKPIEASHRIRTVHA-----FGMVVLEILGTKIEDTGVYTCR-ATNKW 389
+M V G S R+ V A L + G ++ED G YTC T
Sbjct: 44 ESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQ 103
Query: 390 GQAEISVNL 398
G + + L
Sbjct: 104 GSRSVDIWL 112
Score = 30.2 bits (68), Expect = 2.3
Identities = 15/77 (19%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 1765 KISATKPLDVYWLKNGKKIIPDIRY-----KTLEEDNLFTLLIIEAVVEDSGAYEC-VAM 1818
+ + + V+ G R + E +L + VED G Y C
Sbjct: 41 RHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVT 100
Query: 1819 NNAGEARCEAELVVQSK 1835
G + L V +K
Sbjct: 101 FPQGSRSVDIWLRVLAK 117
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC
complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A
{Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A*
3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A*
3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A*
2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Length = 207
Score = 38.0 bits (88), Expect = 0.015
Identities = 18/111 (16%), Positives = 35/111 (31%), Gaps = 13/111 (11%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLT--PVNDPELKVEWFHNGKPIFHKNRVKMVSDF 464
PPK + L + C + DPE+K W+ +G + + +
Sbjct: 7 FPPK------PKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY 60
Query: 465 G-----FVVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPS 510
V+ + + + EY C+ N + P + + P
Sbjct: 61 NSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQ 111
Score = 33.7 bits (77), Expect = 0.32
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP +K W+ +GV + + + L++ + Y CK +N
Sbjct: 34 DPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSN 89
Score = 32.6 bits (74), Expect = 0.75
Identities = 18/90 (20%), Positives = 30/90 (33%), Gaps = 8/90 (8%)
Query: 706 AP-VFTVPLSNIDDLREGENAHF--EARLTPTDDPKLKVEWFWNGKPMK---TGSRFRTF 759
P VF P D L +DP++K W+ +G + T R +
Sbjct: 1 GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQY 60
Query: 760 CDFGFVI--LEISPVYPEDCGQYSCRAYND 787
V+ L + + +Y C+ N
Sbjct: 61 NSTYRVVSVLTVLHQDWLNGKEYKCKVSNK 90
Score = 31.8 bits (72), Expect = 1.5
Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 10/107 (9%)
Query: 922 TPTDLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKTINDFG-----FV 974
P D + T C + DP + W+ +G + +
Sbjct: 10 KPKDTLMISRT-PEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVS 68
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
+L + + Y CK + + + T+ +G EPQV
Sbjct: 69 VLTVLHQDWLNGKEYKCKVS--NKALPAPIEKTISKAKGQPREPQVY 113
Score = 31.8 bits (72), Expect = 1.6
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 134 PSKDATMKIG---KLLCTLT--PVNDPELKVEWFHNGKPIFHKNRVKMVSDFG-----FV 183
P T+ I ++ C + DPE+K W+ +G + + +
Sbjct: 9 PKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVS 68
Query: 184 VMDIAYVQSHDSGEYVCQWFVNNKPLPAGAK 214
V+ + + + EY C+ V+NK LPA +
Sbjct: 69 VLTVLHQDWLNGKEYKCK--VSNKALPAPIE 97
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor,
immune system, IG domain, cytotoxicity, C2-type IG-like
domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 188
Score = 37.5 bits (87), Expect = 0.018
Identities = 16/111 (14%), Positives = 25/111 (22%), Gaps = 37/111 (33%)
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTS-------------------ASMKVQGKRSIILES 809
I + GQYSC + S +V +
Sbjct: 61 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPEVISGEKVTFYC 120
Query: 810 QLPKGMEVFISFHE------------------ISPVYPEDCGQYSCRAYND 842
+L +F+ E + PV G Y C +
Sbjct: 121 RLDTATSMFLLLKEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYN 171
Score = 37.5 bits (87), Expect = 0.019
Identities = 31/168 (18%), Positives = 46/168 (27%), Gaps = 18/168 (10%)
Query: 331 SLIPVGDQ--------TMTVEF-LYNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVY 381
++P Q VE+ L+ + A R + V I G Y
Sbjct: 13 FMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQY 72
Query: 382 TCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPEL 441
+C +E S L+ V P + H + G+ F C L
Sbjct: 73 SCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPE--VISGEKVTFYCRLDTATS--- 127
Query: 442 KVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
G+ H R F + V + G Y C N
Sbjct: 128 MFLLLKEGRSS-HVQRGYGKVQAEFP---LGPVTTAHRGTYRCFGSYN 171
Score = 35.2 bits (81), Expect = 0.11
Identities = 22/113 (19%), Positives = 28/113 (24%), Gaps = 19/113 (16%)
Query: 1767 SATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLIIEAVVEDSGAYECVAMNNAG--EA 1824
Y L + R K E N I + +G Y C+ E
Sbjct: 26 QGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELWSEP 85
Query: 1825 RCEAELVVQSKKAPGKQAPAPGAAVAQDEAPTVAEPLKDQNVKEGSAVTLKCR 1877
+LVV + PG V G VT CR
Sbjct: 86 SNLLDLVVTEMYDTPTLSVHPG-----------------PEVISGEKVTFYCR 121
Score = 33.2 bits (76), Expect = 0.48
Identities = 26/173 (15%), Positives = 46/173 (26%), Gaps = 31/173 (17%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGK--PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGE 481
C ++ + G + + ++ F I + S +G+
Sbjct: 18 EKQVTICCQGNY---GAVEYQLHFEGSLFAVDRPKPPERINKVKFY---IPDMNSRMAGQ 71
Query: 482 YVCRAWNNFIFIPP--------FPIFIFHQIRL-PSPSQDNLDVPEAGKVHFDCRLEPKS 532
Y C ++ P ++ + + P P V KV F CRL+ +
Sbjct: 72 YSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPGPE-----VISGEKVTFYCRLDTAT 126
Query: 533 DPTMRIDWFFNGRPFATGSRVKTVY-DFGFISLDMDYVYARDSGEYICRATNK 584
GR V +F V G Y C +
Sbjct: 127 S---MFLLLKEGRSSHVQRGYGKVQAEFPLGP-----VTTAHRGTYRCFGSYN 171
Score = 30.2 bits (68), Expect = 4.7
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 820 SFHEISPVYPEDCGQYSCRAYNDYGEAVTS 849
F+ I + GQYSC + S
Sbjct: 58 KFY-IPDMNSRMAGQYSCIYRVGELWSEPS 86
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY
high affinity, antibody binding, electrostatics,
directed evolution; HET: FLU; 1.50A {Homo sapiens}
Length = 268
Score = 38.1 bits (89), Expect = 0.018
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL IN + A+D +Y C
Sbjct: 83 GSGSGTDF-----TLKINRVEAEDLGVYFC 107
Score = 34.7 bits (80), Expect = 0.24
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
V L +N+LR +D+ IY C
Sbjct: 232 VYLQMNNLRVEDTGIYYC 249
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor,
X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A
1z2k_A
Length = 112
Score = 36.3 bits (83), Expect = 0.018
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 244 NNKPLPAGAKFKTTHDFGY--VALDIVGAYAEDSGIYTVKATNSKGSATT 291
N+ P + F + F Y AL I A +DSG Y ++ TN+ G
Sbjct: 54 NDGPSWSNVSFSDIYGFDYGDFALSIKSAKLQDSGHYLLEITNTGGKVCN 103
Score = 30.9 bits (69), Expect = 1.2
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 12/92 (13%)
Query: 1418 EPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMKVEWFLNGKPLPHKNRFNPI 1477
+P + +P T+ + Q + + ++ + W+ N P F+ I
Sbjct: 18 KPVQLRPSNIQTKDVSVQWKKTEQGSHRKIEI---------LNWY-NDGPSWSNVSFSDI 67
Query: 1478 YDFGY--VAMNFGWVYPEDSGEYLCRATNLYG 1507
Y F Y A++ +DSG YL TN G
Sbjct: 68 YGFDYGDFALSIKSAKLQDSGHYLLEITNTGG 99
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized
SCFV), SCFV, monovalent antibo antibody engineering,
immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Length = 276
Score = 37.7 bits (88), Expect = 0.024
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL+I+SL+ +D A Y C
Sbjct: 75 GSGSGTDF-----TLTISSLQPEDFATYYC 99
Score = 33.4 bits (77), Expect = 0.65
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 215 LQMNSLRAEDTAVYYC 230
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody,
immune system; NMR {Homo sapiens}
Length = 512
Score = 38.5 bits (89), Expect = 0.026
Identities = 26/186 (13%), Positives = 45/186 (24%), Gaps = 10/186 (5%)
Query: 379 GVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVND 438
G + K Q E S QP +++ L D A F C + +
Sbjct: 268 GEEKKKEKEKEEQEERETKTPEC-PSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDL 326
Query: 439 PELKVEWFHNGKPIFHKNR---VKMVSDFGFVVMDIAYVQSHDS---GEYVCRAWNNFIF 492
+ + W GK ++ S+ + C + +
Sbjct: 327 KDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPSLP 386
Query: 493 IPPFPIFIFHQIRLPSPSQDNLDVPEA---GKVHFDCRLEPKSDPTMRIDWFFNGRPFAT 549
+ P NL C + S P + + W + R T
Sbjct: 387 PQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNILLMWLEDQREVNT 446
Query: 550 GSRVKT 555
Sbjct: 447 SGFAPA 452
Score = 31.9 bits (72), Expect = 2.2
Identities = 18/173 (10%), Positives = 34/173 (19%), Gaps = 33/173 (19%)
Query: 144 KLLCTLTPVNDPELKVEWFHNGKPIFHKNR---VKMVSDFGFVVMDIAYVQSHDS---GE 197
C + + + + W GK ++ S+ +
Sbjct: 316 TFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTS 375
Query: 198 YVCQWFVNNKPLPAGAKFKTTHDFG-------YVALDIELMLKTLVPFT----------- 239
C +N+ LP L +
Sbjct: 376 VTCT--LNHPSLPPQRLMALREPAAQAPVKLSLNLLASSDPPEAASWLLCEVSGFSPPNI 433
Query: 240 --EWFVNNKPLPAGAKFKTTHDFGYVALDIVGAYAEDSGIYTVKATNSKGSAT 290
W + + + F + S + V A S AT
Sbjct: 434 LLMWLEDQREVNTS-GFAPARP---PPQPGSTTFWAWS-VLRVPAPPSPQPAT 481
Score = 30.0 bits (67), Expect = 8.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L++ S+ A D+A+Y C
Sbjct: 82 LNLRSMSAADTAMYYC 97
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation
marker blast-1, BCM1 surface antigen, leukocyte antigen
MEM-102, TCT.1; NMR {Homo sapiens}
Length = 121
Score = 35.7 bits (82), Expect = 0.026
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 17/80 (21%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGK-----------PIFH---KNRVKMVSDFGFVVM 469
G + + + + + ++ WF+ F K RV++ G +
Sbjct: 19 GSNVTLNISESLPENYK-QLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSG--AL 75
Query: 470 DIAYVQSHDSGEYVCRAWNN 489
I+ VQ D+ Y+ R
Sbjct: 76 YISKVQKEDNSTYIMRVLKK 95
Score = 35.7 bits (82), Expect = 0.035
Identities = 19/86 (22%), Positives = 26/86 (30%), Gaps = 13/86 (15%)
Query: 721 EGENAHFEARLTPTDDPKLKVEWFWN----------GKPMKTGSRF--RTFCDFGFVILE 768
G N + ++ K ++ WF+ K S+F R D L
Sbjct: 18 SGSNVTLNISESLPENYK-QLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALY 76
Query: 769 ISPVYPEDCGQYSCRAYNDYGEAVTS 794
IS V ED Y R G
Sbjct: 77 ISKVQKEDNSTYIMRVLKKTGNEQEW 102
Score = 33.7 bits (77), Expect = 0.15
Identities = 13/88 (14%), Positives = 21/88 (23%), Gaps = 14/88 (15%)
Query: 934 AHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVI------------LEINDV 981
+ + + WF+ + F L I+ V
Sbjct: 22 VTLNISESLPENYK-QLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKV 80
Query: 982 YLRDSGLYTCKATNKHGEATTSC-KLTV 1008
D+ Y + K G KL V
Sbjct: 81 QKEDNSTYIMRVLKKTGNEQEWKIKLQV 108
Score = 31.4 bits (71), Expect = 1.0
Identities = 13/104 (12%), Positives = 27/104 (25%), Gaps = 16/104 (15%)
Query: 1736 GRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD-VYWLKNGKKIIPDIRYKTLE- 1793
G G L ++ G + S + + W + I + + +
Sbjct: 1 GSSGSSGQGHLVHMTVVS---GSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKY 57
Query: 1794 -----------EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARC 1826
+ L I + ED+ Y + G +
Sbjct: 58 FESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGNEQE 101
Score = 30.3 bits (68), Expect = 2.5
Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 2/55 (3%)
Query: 8 NLKIEWFKNGVPLSLGSRI--RSTFDFGLVTLSINSLRADDSAIYTCKATNLLGE 60
+ KI + + S+ R D L I+ ++ +D++ Y + G
Sbjct: 44 DQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYIMRVLKKTGN 98
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein
complex, hydrolase/immune system complex; 1.45A
{Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Length = 113
Score = 35.4 bits (82), Expect = 0.034
Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 8/52 (15%)
Query: 11 IEWFK------NGVPLSLGSRIRSTFDFG--LVTLSINSLRADDSAIYTCKA 54
W++ N +S G R T + G +L IN L +D Y C
Sbjct: 34 TCWYRKKSGEGNEESISKGGRYVETVNSGSKSFSLRINDLTVEDGGTYRCGL 85
Score = 32.7 bits (75), Expect = 0.28
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 14/95 (14%)
Query: 922 TPTDLTLAE---STLAHFECRLTPTNDPSMTVEWF--HNGKA----LSAGSR--IKTIND 970
TP +T T+ C L + + W+ +G+ +S G R +
Sbjct: 6 TPRSVTKETGESLTI---NCVLRDASYALGSTCWYRKKSGEGNEESISKGGRYVETVNSG 62
Query: 971 FGFVILEINDVYLRDSGLYTCKATNKHGEATTSCK 1005
L IND+ + D G Y C G +
Sbjct: 63 SKSFSLRINDLTVEDGGTYRCGLGVAGGYCDYALC 97
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C
region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC;
2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
b.1.1.2
Length = 444
Score = 37.6 bits (87), Expect = 0.036
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 7/121 (5%)
Query: 337 DQTMTVEFLYNGKPIEASHRIRTVHAFG-----MVVLEILGTKIEDTGVYTCRATNKWGQ 391
D + + + N + + + + L I + C+ NK
Sbjct: 271 DPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLP 330
Query: 392 AEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP 451
A I + S P + + E C +T ++ VEW +NGK
Sbjct: 331 APIERTISKPKGSVRAPQVYV--LPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKT 388
Query: 452 I 452
Sbjct: 389 E 389
Score = 35.3 bits (81), Expect = 0.19
Identities = 33/196 (16%), Positives = 58/196 (29%), Gaps = 35/196 (17%)
Query: 381 YTCRATNKWGQAEISVNLE--------------CVDKSKGQPPKFTSHIKSLEGLKDGDS 426
TC + ++ +E G P F K + L S
Sbjct: 198 ITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLS 257
Query: 427 AHFECTLTPV--NDPELKVEWFHNGKPI---FHKNRVKMVSD--FGFVVMDIAYVQSHDS 479
C + V +DP++++ WF N + + + + + I +
Sbjct: 258 PIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSG 317
Query: 480 GEYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDV-----PEA----GKVHFDCRLEP 530
E+ C+ N P I I P S V PE +V C +
Sbjct: 318 KEFKCKVNN-----KDLPAPIERTISKPKGSVRAPQVYVLPPPEEEMTKKQVTLTCMVTD 372
Query: 531 KSDPTMRIDWFFNGRP 546
+ ++W NG+
Sbjct: 373 FMPEDIYVEWTNNGKT 388
Score = 34.9 bits (80), Expect = 0.28
Identities = 24/118 (20%), Positives = 36/118 (30%), Gaps = 10/118 (8%)
Query: 911 EDLGKAPEFLTTPT-DLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKT 967
LG F+ P L S C + +DP + + WF N +
Sbjct: 234 NLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTH 293
Query: 968 INDFG-----FVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQV 1020
D+ L I + CK NK + + T+ +G PQV
Sbjct: 294 REDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNK--DLPAPIERTISKPKGSVRAPQV 349
Score = 32.6 bits (74), Expect = 1.4
Identities = 13/56 (23%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP+++I WF N V + D+ + L I + CK N
Sbjct: 271 DPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNN 326
Score = 32.2 bits (73), Expect = 2.0
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ L ++ L+++D+A+Y C
Sbjct: 79 LYLQMSRLKSEDTAMYYC 96
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL
BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2
b.1.1.2 PDB: 1i1a_D*
Length = 239
Score = 36.8 bits (85), Expect = 0.038
Identities = 27/168 (16%), Positives = 50/168 (29%), Gaps = 31/168 (18%)
Query: 400 CVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLT--PVNDPELKVEWFHNGKPIFHKNR 457
C F K+ + L G + C + NDPE++ WF + +
Sbjct: 8 CGCTGSEVSSVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEV--HTA 65
Query: 458 VKMVSDFGF-------VVMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPS-- 508
+ + I + + C+ + FP I I P
Sbjct: 66 QTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNS-----GAFPAPIEKSISKPEGT 120
Query: 509 ----------PSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDWFFNGRP 546
P ++ + +V C ++ P + +W NG+P
Sbjct: 121 PRGPQVYTMAPPKEEMT---QSQVSITCMVKGFYPPDIYTEWKMNGQP 165
Score = 36.4 bits (84), Expect = 0.061
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGV-PLSLGSRIRSTFDFGLV----TLSINSLRADDSAIYTCKATN 56
DP ++ WF + V + + + L I + + CK +
Sbjct: 48 DPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNS 103
Score = 34.5 bits (79), Expect = 0.23
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 16/91 (17%)
Query: 134 PSKDATMKIG---KLLCTLT--PVNDPELKVEWFHNGKPIFHKNRVKMVSDFGF------ 182
P + G K+ C + NDPE++ WF + + +
Sbjct: 23 PKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEV--HTAQTHAPEKQSNSTLRS 80
Query: 183 -VVMDIAYVQSHDSGEYVCQWFVNNKPLPAG 212
+ I + + C+ VN+ PA
Sbjct: 81 VSELPIVERDWLNGKTFKCK--VNSGAFPAP 109
Score = 32.6 bits (74), Expect = 1.1
Identities = 16/102 (15%), Positives = 27/102 (26%), Gaps = 9/102 (8%)
Query: 927 TLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKTINDFG-----FVILEIN 979
L C + NDP + WF + + L I
Sbjct: 28 VLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIV 87
Query: 980 DVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
+ + + CK G + ++ +G PQV
Sbjct: 88 ERDWLNGKTFKCKVN--SGAFPAPIEKSISKPEGTPRGPQVY 127
Score = 32.2 bits (73), Expect = 1.2
Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 7/88 (7%)
Query: 708 VFTVPLSNIDDLREGENAHFEARLT--PTDDPKLKVEWFWNGKPMKTG-----SRFRTFC 760
VF P D L G + +DP+++ WF + + T +
Sbjct: 18 VFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNST 77
Query: 761 DFGFVILEISPVYPEDCGQYSCRAYNDY 788
L I + + C+ +
Sbjct: 78 LRSVSELPIVERDWLNGKTFKCKVNSGA 105
Score = 31.8 bits (72), Expect = 1.8
Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 2/86 (2%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
L I+ + + C+ + A I ++ + + P +T E
Sbjct: 83 ELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEE--MTQSQ 140
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPI 452
C + P++ EW NG+P
Sbjct: 141 VSITCMVKGFYPPDIYTEWKMNGQPQ 166
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen,
beta-turn, immune system; HET: NLE; NMR {Rattus
norvegicus} SCOP: b.1.1.1 b.1.1.1
Length = 257
Score = 37.0 bits (86), Expect = 0.040
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
SR S L +NSL+ DD+ Y C
Sbjct: 69 ISRDTSKNQV---FLKMNSLQTDDTGTYYC 95
Score = 34.7 bits (80), Expect = 0.24
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 6/37 (16%)
Query: 17 GVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G+P GS + + TL+I+SL+ +D A Y C
Sbjct: 195 GIPSRFSGSGSGTDY-----TLTISSLQPEDVATYFC 226
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II,
MEM receptor, molecular mimicry, multiple sclerosis,
immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo
sapiens}
Length = 279
Score = 36.8 bits (85), Expect = 0.050
Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 9/93 (9%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISVNLEC--------VDKSKGQPPKFTSHIKSLE 419
L + ED+ Y C + + D PP+ S
Sbjct: 102 LTVTSAHPEDSSFYIC-SARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEA 160
Query: 420 GLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ A C T +++ W+ NGK +
Sbjct: 161 EISHTQKATLVCLATGFYPDHVELSWWVNGKEV 193
Score = 33.7 bits (77), Expect = 0.43
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 36 TLSINSLRADDSAIYTC 52
TL++ S +DS+ Y C
Sbjct: 101 TLTVTSAHPEDSSFYIC 117
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand
complex, immunoglobulin-like sandwich, T cell, B cell,
programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Length = 134
Score = 35.1 bits (81), Expect = 0.055
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCKATNL 57
++ + DF ++I R +DS IY C A +L
Sbjct: 74 IIQLPNRHDF---HMNILDTRRNDSGIYLCGAISL 105
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody,
virus/viral protein/antibiotic complex; 2.30A {Homo
sapiens} SCOP: b.1.1.1 b.1.1.1
Length = 247
Score = 36.5 bits (85), Expect = 0.057
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL+I+ L +D A+Y C
Sbjct: 198 GSGSGTDF-----TLTISRLEPEDFAVYYC 222
Score = 32.6 bits (75), Expect = 1.1
Identities = 10/18 (55%), Positives = 15/18 (83%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ L +NSLRA+D+A+Y C
Sbjct: 81 LYLQMNSLRAEDTAVYYC 98
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor,
IG-like domain, immune system; 1.00A {Mus musculus} PDB:
2icc_A 2ice_S* 2icf_S*
Length = 119
Score = 34.9 bits (80), Expect = 0.060
Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 19/96 (19%)
Query: 920 LTTPTDLTLAESTLAHFECRLTPTNDP-SMTVEWF--------------HNGKALSAGS- 963
L TP +T +C P + V+W G +
Sbjct: 5 LKTPESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKY 64
Query: 964 --RIKTINDF-GFVILEINDVYLRDSGLYTCKATNK 996
R+K + G V L+IN + + D YTC+ T +
Sbjct: 65 RGRLKVSHKVPGDVSLQINTLQMDDRNHYTCEVTWQ 100
Score = 34.1 bits (78), Expect = 0.11
Identities = 14/81 (17%), Positives = 24/81 (29%), Gaps = 19/81 (23%)
Query: 424 GDSAHFECTLTPVNDPE-LKVEWF--HNGKPIFH---------------KNRVKMVSDF- 464
+C P+ + V+W H + + R+K+
Sbjct: 16 KGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVP 75
Query: 465 GFVVMDIAYVQSHDSGEYVCR 485
G V + I +Q D Y C
Sbjct: 76 GDVSLQINTLQMDDRNHYTCE 96
Score = 32.6 bits (74), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 33 GLVTLSINSLRADDSAIYTCKATN 56
G V+L IN+L+ DD YTC+ T
Sbjct: 76 GDVSLQINTLQMDDRNHYTCEVTW 99
Score = 31.5 bits (71), Expect = 0.78
Identities = 14/76 (18%), Positives = 25/76 (32%), Gaps = 19/76 (25%)
Query: 145 LLCTLTPVNDPE-LKVEWF--HNGKPIFH---------------KNRVKMVSDF-GFVVM 185
+ C P+ + V+W H + + R+K+ G V +
Sbjct: 21 IQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSL 80
Query: 186 DIAYVQSHDSGEYVCQ 201
I +Q D Y C+
Sbjct: 81 QINTLQMDDRNHYTCE 96
Score = 31.5 bits (71), Expect = 0.94
Identities = 19/114 (16%), Positives = 35/114 (30%), Gaps = 21/114 (18%)
Query: 510 SQDNLDVPEAGKVHFDCRLEPKSDPT-MRIDWFF--------------NGRPFATGS--- 551
+ +++ G V C +P + + W G
Sbjct: 7 TPESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRG 66
Query: 552 RVKTV-YDFGFISLDMDYVYARDSGEYICRATNKWGTAMTKAKVICKVLTVIVE 604
R+K G +SL ++ + D Y C T W T + K++ + V
Sbjct: 67 RLKVSHKVPGDVSLQINTLQMDDRNHYTCEVT--WQTPDGNQVIRDKIIELRVR 118
Score = 29.9 bits (67), Expect = 2.5
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 21/105 (20%)
Query: 1062 DNLDVPEAGKVHFDCRLEPKSDPT-MRIDWFF--------------NGRPFATGS---RV 1103
+++ G V C +P + + W G R+
Sbjct: 9 ESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRL 68
Query: 1104 KTV-YDFGFISLDMDYVYARDSGEYICRATNKW--GTAMTKAKVI 1145
K G +SL ++ + D Y C T + G + + K+I
Sbjct: 69 KVSHKVPGDVSLQINTLQMDDRNHYTCEVTWQTPDGNQVIRDKII 113
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor,
immune system/receptor/complex, TCR, MHC,
immunodominance, FLU, complex; 1.40A {Homo sapiens}
SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E
2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D*
3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E
3kxf_E 2cde_B ...
Length = 252
Score = 36.5 bits (84), Expect = 0.062
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 4/89 (4%)
Query: 368 LEILGTKIEDTGVYTCRA--TNKWGQAEISVNLECV--DKSKGQPPKFTSHIKSLEGLKD 423
L + + T Y C + + + Q V D PP+ S +
Sbjct: 78 LTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISH 137
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI 452
A C T +++ W+ NGK +
Sbjct: 138 TQKATLVCLATGFYPDHVELSWWVNGKEV 166
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus
musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Length = 218
Score = 36.1 bits (84), Expect = 0.064
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 8/39 (20%)
Query: 16 NGVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+G+P S GS + LSI++++ +D AIY C
Sbjct: 60 DGIPDRFS-GSSSGADR-----YLSISNIQPEDEAIYIC 92
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody,
immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL
SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2
b.1.1.2 PDB: 2qej_A*
Length = 214
Score = 36.0 bits (83), Expect = 0.068
Identities = 24/154 (15%), Positives = 38/154 (24%), Gaps = 37/154 (24%)
Query: 134 PSKDATM-KIGKLLCTLTPVNDPE-LKVEWFHNGK-------PIFHKNRVKMVSDFGFVV 184
+D + L CTLT + D + W + P VS V
Sbjct: 12 ALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVQGPPERDLCGCYSVS----SV 67
Query: 185 MDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTTHDFGYVALDI--------ELMLKTLV 236
+ + + C + ++ EL L LV
Sbjct: 68 LPGCAEPWNHGKTFTCT--AAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELV 125
Query: 237 PFT-------------EWFVNNKPLPAGAKFKTT 257
T W ++ LP K+ T
Sbjct: 126 TLTCLARGFSPKDVLVRWLQGSQELPRE-KYLTW 158
Score = 34.5 bits (79), Expect = 0.19
Identities = 12/86 (13%), Positives = 23/86 (26%), Gaps = 2/86 (2%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
VL +TC A + ++ L P+ E L +
Sbjct: 67 VLPGCAEPWNHGKTFTCTAAYPESKTPLTATL--SKSGNTFRPEVHLLPPPSEELALNEL 124
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPI 452
C + ++ V W + +
Sbjct: 125 VTLTCLARGFSPKDVLVRWLQGSQEL 150
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system;
2.68A {Homo sapiens} PDB: 3hg1_E
Length = 245
Score = 36.4 bits (84), Expect = 0.069
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 13/95 (13%)
Query: 368 LEILGTKIEDTGVYTC---------RATNKWGQ-AEISVNLECVDKSKGQPPKFTSHIKS 417
L + D+G Y C T +G+ + ++V D +K PP+ S
Sbjct: 76 LSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVV---EDLNKVFPPEVAVFEPS 132
Query: 418 LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ A C T +++ W+ NGK +
Sbjct: 133 EAEISHTQKATLVCLATGFFPDHVELSWWVNGKEV 167
Score = 32.1 bits (73), Expect = 1.4
Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 4/30 (13%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
SR + F LS L DS Y C
Sbjct: 66 ASRPQDR-QF---ILSSKKLLLSDSGFYLC 91
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell
adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo
sapiens} SCOP: b.1.1.3 b.1.1.4
Length = 192
Score = 35.9 bits (82), Expect = 0.071
Identities = 26/180 (14%), Positives = 54/180 (30%), Gaps = 26/180 (14%)
Query: 915 KAPEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
K E P L + C T +E N L ++ K
Sbjct: 1 KVFEVHVRPKKLAVEPKGSLEVNCSTTCNQPEVGGLETSLNKILLDEQAQWKHYL----- 55
Query: 975 ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTV-KGRQGIDVEPQVSAIFANATKNI-- 1031
++++ + C T + + + ++V + + + + Q + + + I
Sbjct: 56 ---VSNI--SHDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIEC 110
Query: 1032 --------QKLEEALYRKDELIPDE----EKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE 1079
L L+R +E + E P P T+ D + + +F C
Sbjct: 111 RVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHR-NFSCLAV 169
Score = 34.7 bits (79), Expect = 0.14
Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSL--RADDSAIYTCKATNLLGE 60
+L + F+ L + ++ T + NS R D ++C A L
Sbjct: 119 DSLTLFLFRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDLMS 174
Score = 31.7 bits (71), Expect = 1.5
Identities = 21/165 (12%), Positives = 45/165 (27%), Gaps = 16/165 (9%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYV 483
S C+ T +E N + + + K ++V +I+
Sbjct: 17 KGSLEVNCSTTCNQPEVGGLETSLNKILLDEQAQWKH-----YLVSNIS-----HDTVLQ 66
Query: 484 CRAWNNFI-FIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDP--TMRIDW 540
C + + ++ R + V +CR+ P +P ++ +
Sbjct: 67 CHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRV-PTVEPLDSLTLFL 125
Query: 541 FFNGRPFATGSRVKTVYDFGFISLDMDYVYAR-DSG-EYICRATN 583
F + K + + R D + C A
Sbjct: 126 FRGNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVL 170
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel,
immunoglobulin fold, IGV domain, TIM, immune system;
2.50A {Mus musculus}
Length = 116
Score = 34.5 bits (79), Expect = 0.078
Identities = 15/81 (18%), Positives = 19/81 (23%), Gaps = 20/81 (24%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPIFHK-----------------NRVKMVSDF-- 464
G CT + W P +R +
Sbjct: 12 GHPVTLPCTYST-YRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISE 70
Query: 465 GFVVMDIAYVQSHDSGEYVCR 485
G V + I DSG Y CR
Sbjct: 71 GDVSLTIENSVESDSGLYCCR 91
Score = 34.1 bits (78), Expect = 0.094
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 117 DVECKENENVHFDCRVEPSKDATMKI-GKLLCTLTPVNDPELKVEWFHNGKPIFHKN-RV 174
+V+ V C + T G+ C P + + + W + + + K+ R
Sbjct: 6 EVKGVVGHPVTLPCTYSTYRGITTTCWGRGQC---PSSACQNTLIWTNGHRVTYQKSSRY 62
Query: 175 KMVSDF--GFVVMDIAYVQSHDSGEYVCQ 201
+ G V + I DSG Y C+
Sbjct: 63 NLKGHISEGDVSLTIENSVESDSGLYCCR 91
Score = 32.2 bits (73), Expect = 0.44
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 25 RIRSTFDFGLVTLSINSLRADDSAIYTCK 53
++ G V+L+I + DS +Y C+
Sbjct: 63 NLKGHISEGDVSLTIENSVESDSGLYCCR 91
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral
virus, virus-immune SYST complex; 30.00A {Mus musculus}
SCOP: i.6.1.1
Length = 438
Score = 36.4 bits (85), Expect = 0.082
Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
SR + L ++SLR+ D+A+Y C
Sbjct: 288 ISRDNAKNTL---YLQMSSLRSADTAMYYC 314
Score = 35.3 bits (82), Expect = 0.23
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS R+ F TL+I+ + ADD A Y C
Sbjct: 68 GSGSRTDF-----TLTIDPVEADDVATYYC 92
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 35.5 bits (81), Expect = 0.091
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 18/87 (20%)
Query: 1148 AKHDIVTESQLPDSMS---AEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAW 1204
A+ D +T+ P+S+ E+ K L++ ++ E E E+ K++ W
Sbjct: 75 AQADRLTQE--PESIRKWREEQRKRLQELDAASKVMEQEWREK---------AKKDLEEW 123
Query: 1205 YD--SELSEYQKE--RANESTELEKHD 1227
SE E K R + ++ D
Sbjct: 124 NQRQSEQVEKNKINNRIADKAFYQQPD 150
Score = 33.2 bits (75), Expect = 0.42
Identities = 14/104 (13%), Positives = 37/104 (35%), Gaps = 32/104 (30%)
Query: 1180 EEDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTELEKHDIVTESQLPDSMS 1239
+ D + +EP + + W R + L++ D ++
Sbjct: 76 QADRLTQEPESIRK----------W-----------REEQRKRLQELDAASKVME-QEWR 113
Query: 1240 AEKLKELE---KNYTPEEIE----EDEIPEEPPRFITEIESVTV 1276
+ K+LE + + E++E + I ++ F + ++ +
Sbjct: 114 EKAKKDLEEWNQRQS-EQVEKNKINNRIADK--AFYQQPDADII 154
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex,
costimulation, glycoprotein, immunoglo domain,
membrane, transmembrane, receptor; 1.60A {Mus musculus}
PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Length = 117
Score = 34.3 bits (79), Expect = 0.094
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 12/47 (25%)
Query: 16 NGVPLSLGSRIRSTF-----DFGLVTLSINSLRADDSAIYTCKATNL 57
+R + DF ++I R +DS IY C A +L
Sbjct: 56 PVQD----ARFQIIQLPNRHDF---HMNILDTRRNDSGIYLCGAISL 95
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system;
2.21A {Orectolobus maculatus} PDB: 2ywy_A
Length = 111
Score = 33.8 bits (78), Expect = 0.10
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 19 PLSLGSRIRSTFDFG--LVTLSINSLRADDSAIYTCKA 54
+S+G R T D G +L I+ LR +DS Y C+A
Sbjct: 48 TISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYKCQA 85
Score = 30.4 bits (69), Expect = 1.9
Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 24/93 (25%)
Query: 938 CRLTPTNDPSMTVEWF--HNGKALS---------AGSRIKTINDFGFVILEINDVYLRDS 986
C L + + W+ G + K F L I+D+ + DS
Sbjct: 22 CVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSF---SLRISDLRVEDS 78
Query: 987 GLYTCKATNKHGEATTSC----------KLTVK 1009
G Y C+A + LTVK
Sbjct: 79 GTYKCQADYSPSCYSYPSLESAVEGAGTVLTVK 111
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4
protein; AB-ignar, AB-12Y-2, glycoprotein, membran
protease inhibitor; 2.05A {Orectolobus maculatus} PDB:
2z8w_C 2z8v_C 1ves_A 1ver_A
Length = 126
Score = 34.4 bits (79), Expect = 0.10
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 21 SLGSRIRSTFD--FGLVTLSINSLRADDSAIYTCKA 54
S+G R T + +L I+ LR +DS Y C+A
Sbjct: 50 SIGGRYVETVNKGSKSFSLRISDLRVEDSGTYKCQA 85
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor
CD8AB MHC complex, immune response, membrane, MHC I,
phosphoprotein, transmembrane; 2.60A {Mus musculus}
Length = 150
Score = 34.6 bits (80), Expect = 0.11
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
LSI +++ +DS Y C
Sbjct: 82 PFLSIMNVKPEDSDFYFC 99
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET:
NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G*
3b9k_A* 2atp_A* 2arj_R
Length = 128
Score = 34.1 bits (78), Expect = 0.12
Identities = 7/57 (12%), Positives = 19/57 (33%), Gaps = 7/57 (12%)
Query: 7 PNLKIEWFKNGVPLSLGSRIRSTFDFG-------LVTLSINSLRADDSAIYTCKATN 56
P + + ++ ++ S+ F L++N ++ Y C +
Sbjct: 50 PTFVVYMASSHNKITWDEKLNSSKLFSAMRDTNNKYVLTLNKFSKENEGYYFCSVIS 106
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC,
immune system; HET: NAG; 2.40A {Mus musculus} SCOP:
b.1.1.1 PDB: 3b9k_B*
Length = 115
Score = 33.7 bits (78), Expect = 0.13
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
LSI +++ +DS Y C
Sbjct: 79 PFLSIMNVKPEDSDFYFC 96
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane,
phosphorylation, immunoglobulin fold, signal; 1.90A
{Rattus norvegicus} SCOP: b.1.1.1
Length = 124
Score = 33.8 bits (77), Expect = 0.14
Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 24/89 (26%)
Query: 424 GDSAHFECTLT--PVNDPELKVEW---------------FHNGKPIFH-----KNRVKMV 461
G C+ ++ W + G+P K R++ V
Sbjct: 14 GSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWV 73
Query: 462 SD--FGFVVMDIAYVQSHDSGEYVCRAWN 488
D + + I + D+G + C N
Sbjct: 74 GDPSWKDGSIVIHNLDYSDNGTFTCDVKN 102
Score = 33.4 bits (76), Expect = 0.21
Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 29/114 (25%)
Query: 132 VEPSKDATMKIGK---LLCTLT--PVNDPELKVEW---------------FHNGKPIFH- 170
V ++ +G L C+ ++ W + G+P
Sbjct: 3 VYTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDE 62
Query: 171 ----KNRVKMVSD--FGFVVMDIAYVQSHDSGEYVCQWFVNNKPLPAGAKFKTT 218
K R++ V D + + I + D+G + C V N P G + T
Sbjct: 63 VGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTCD--VKNPPDIVGKTSQVT 114
Score = 31.5 bits (71), Expect = 0.89
Identities = 14/85 (16%), Positives = 29/85 (34%), Gaps = 10/85 (11%)
Query: 527 RLEPKSDPTMRIDWFFNGRPFATGS-----RVKTVYD--FGFISLDMDYVYARDSGEYIC 579
+ I + G+P+ R++ V D + S+ + + D+G + C
Sbjct: 39 YQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTC 98
Query: 580 RATNKWGTAMTKAKVICKVLTVIVE 604
N ++V L V +
Sbjct: 99 DVKNPPDIVGKTSQV---TLYVFEK 120
Score = 29.2 bits (65), Expect = 5.9
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 7/75 (9%)
Query: 1077 RLEPKSDPTMRIDWFFNGRPFATGS-----RVKTVYD--FGFISLDMDYVYARDSGEYIC 1129
+ I + G+P+ R++ V D + S+ + + D+G + C
Sbjct: 39 YQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIVIHNLDYSDNGTFTC 98
Query: 1130 RATNKWGTAMTKAKV 1144
N ++V
Sbjct: 99 DVKNPPDIVGKTSQV 113
Score = 29.2 bits (65), Expect = 6.4
Identities = 6/37 (16%), Positives = 11/37 (29%)
Query: 1335 DLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATI 1371
S+ I + D G + C N + +
Sbjct: 77 SWKDGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQV 113
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable
domain-like beta-sandwich, immune system; 1.56A
{Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Length = 111
Score = 33.4 bits (77), Expect = 0.16
Identities = 12/45 (26%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+ F G S S + F L+I R DD Y C
Sbjct: 52 SNSGYKFAEGFKDSRFSMTVNDQKF---DLNIIGTREDDGGEYFC 93
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens}
PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Length = 246
Score = 34.8 bits (80), Expect = 0.17
Identities = 19/92 (20%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 368 LEILGTKIEDTGVYTC-------RATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEG 420
L + ED+ Y C +G LE D PP+ S
Sbjct: 79 LTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE--DLKNVFPPEVAVFEPSEAE 136
Query: 421 LKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ A C T +++ W+ NGK +
Sbjct: 137 ISHTQKATLVCLATGFYPDHVELSWWVNGKEV 168
Score = 33.7 bits (77), Expect = 0.42
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 36 TLSINSLRADDSAIYTC 52
TL++ S +DS+ Y C
Sbjct: 78 TLTVTSAHPEDSSFYIC 94
>1q8m_A Triggering receptor expressed on myeloid cells 1; V-type IG-like
domain, immunoglobulin-like, immune system receptor;
HET: GSH; 2.60A {Homo sapiens} SCOP: b.1.1.1
Length = 127
Score = 33.6 bits (77), Expect = 0.18
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 33 GLVTLSINSLRADDSAIYTC 52
GL+ + + +L+ +DS +Y C
Sbjct: 79 GLLRVRMVNLQVEDSGLYQC 98
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm,
mouse IGG, zinc-finger, DNA-binding, RNA-binding,
tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC;
1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Length = 207
Score = 34.5 bits (79), Expect = 0.19
Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 6 DPNLKIEWFKNGVPLSLG------SRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
DP ++ WF + V + + STF + L I + + C+ +
Sbjct: 34 DPEVQFSWFVDDVEVHTAQTKPREEQFNSTF-RSVSELPIMHQDWLNGKEFKCRVNS 89
Score = 33.3 bits (76), Expect = 0.43
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
L I+ + + CR + A I + K + + P+ + E + D
Sbjct: 69 ELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTI-SKTKGRPKAPQVYTLPPPKEQMA-KDK 126
Query: 427 AHFECTLTPVNDPELKVEWFHNGKPI 452
C +T ++ VEW NG+P
Sbjct: 127 VSLTCMITDFFPEDITVEWESNGQPA 152
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen
complex, HIV inhibiting antibody; 1.89A {Mus musculus}
PDB: 1jp5_A
Length = 247
Score = 35.0 bits (81), Expect = 0.19
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL I+ + A+D IY C
Sbjct: 69 GSGSGTDF-----TLKISRVEAEDLGIYYC 93
Score = 31.9 bits (73), Expect = 1.8
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
Query: 27 RSTFDFGLVTLSINSLRADDSAIYTC 52
T L IN+L+ +D+A Y C
Sbjct: 199 LDTSTS-TAFLQINNLKNEDTATYFC 223
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine,
ligand-receptor complex, signaling protein-cytokin; HET:
NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Length = 313
Score = 34.9 bits (79), Expect = 0.20
Identities = 12/120 (10%), Positives = 34/120 (28%), Gaps = 5/120 (4%)
Query: 424 GDSAHFECTLTPVN---DPELKVEWFHNGKPIFHKNRVKMVSDFGFVVMDIAYVQSHDSG 480
GD C + DPE ++ W + + ++ ++ + ++ +
Sbjct: 15 GDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAF 74
Query: 481 EYVCRAWNNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAGKVHFDCRLEPKSDPTMRIDW 540
C + + P+ + + C+ EP + + +
Sbjct: 75 -LSCSLNWGNSLQILDQVELRAG-YPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSF 132
Score = 34.1 bits (77), Expect = 0.44
Identities = 8/90 (8%), Positives = 23/90 (25%), Gaps = 3/90 (3%)
Query: 922 TPTDLTLAESTLAHFECRLTPTN---DPSMTVEWFHNGKALSAGSRIKTINDFGFVILEI 978
+ + + C + DP + W + G + + + I+ +
Sbjct: 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITL 65
Query: 979 NDVYLRDSGLYTCKATNKHGEATTSCKLTV 1008
+ + L + +L
Sbjct: 66 PHLNHTQAFLSCSLNWGNSLQILDQVELRA 95
Score = 30.3 bits (67), Expect = 6.6
Identities = 6/60 (10%), Positives = 17/60 (28%)
Query: 602 IVEWFYNGKKLPHGHRYRTFHDFGIVILDILYCYEENSGVYECRATNKYGSDVTKASLKC 661
+ W + P G + R I+ + + + + + + L+
Sbjct: 36 QILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSLQILDQVELRA 95
Score = 29.9 bits (66), Expect = 7.8
Identities = 10/93 (10%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 1748 TISSAVINVGQLARF-----DAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDNLFTLLI 1802
++S+ ++++G + W + P R + L + +++
Sbjct: 6 SVSAPIVHLGDPITASCIIKQNCSHLDPEPQILWRLGAEL-QPGGRQQRLSDGTQESIIT 64
Query: 1803 IEAVVEDSGAYEC-VAMNNAGEARCEAELVVQS 1834
+ + C + N+ + + EL
Sbjct: 65 LPHLNHTQAFLSCSLNWGNSLQILDQVELRAGY 97
Score = 29.9 bits (66), Expect = 7.8
Identities = 7/85 (8%), Positives = 24/85 (28%), Gaps = 3/85 (3%)
Query: 719 LREGENAHFEARLTPT---DDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPE 775
+ G+ + DP+ ++ W + G + R I+ + +
Sbjct: 12 VHLGDPITASCIIKQNCSHLDPEPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHT 71
Query: 776 DCGQYSCRAYNDYGEAVTSASMKVQ 800
+ + + + ++
Sbjct: 72 QAFLSCSLNWGNSLQILDQVELRAG 96
>1h03_P Complement decay-accelerating factor; immune system protein,
enteroviral receptor, bacterial receptor, ligand for
CD97, complement pathway; 1.7A {Homo sapiens} SCOP:
g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P
1h04_P 2qzd_A
Length = 125
Score = 33.3 bits (76), Expect = 0.22
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 33 GLVTLSINSLRADDSAIYTCKAT-NLLGEAVSTCTLKIEDRHW 74
G++ + S Y C ++GE CT+ ++ W
Sbjct: 74 GIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 116
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate
binding, immune system; HET: SIA GAL GLC; 1.85A {Mus
musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A*
1qfp_A 2bve_A* 1url_A*
Length = 119
Score = 33.3 bits (76), Expect = 0.23
Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 22/95 (23%)
Query: 416 KSLEGLKDGDSAHFECTLT----PVNDPELKVEWFHNGK----PIFHKNRVKMVSDF--- 464
K+++GL G C + + W+++ + H K+V
Sbjct: 8 KNVQGLS-GSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRG 66
Query: 465 ----------GFVVMDIAYVQSHDSGEYVCRAWNN 489
+ + ++ DSG Y R +
Sbjct: 67 RAELMGNMDHKVCNLLLKDLKPEDSGTYNFRFEIS 101
Score = 31.7 bits (72), Expect = 0.72
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 9/70 (12%)
Query: 943 TNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATT 1002
+ DP + + F L K N L + D+ DSG Y +
Sbjct: 54 SGDPKLVDKRFRGRAELMGNMDHKVCN------LLLKDLKPEDSGTYNFRFEISDSNRWL 107
Query: 1003 SCK---LTVK 1009
K +TV
Sbjct: 108 DVKGTTVTVT 117
Score = 31.0 bits (70), Expect = 1.2
Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 7/73 (9%)
Query: 532 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRATNKWGTAMTK 591
S +D F GR G+ +L + + DSG Y R
Sbjct: 54 SGDPKLVDKRFRGRAELMGNMDH-----KVCNLLLKDLKPEDSGTYNFRFEISDSNRWLD 108
Query: 592 AKVICKVLTVIVE 604
K +TV +
Sbjct: 109 VKGT--TVTVTTD 119
Score = 30.2 bits (68), Expect = 2.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 1339 VSLDIDYVYPEDQGEYVCR 1357
+L + + PED G Y R
Sbjct: 79 CNLLLKDLKPEDSGTYNFR 97
Score = 29.8 bits (67), Expect = 3.3
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 13/67 (19%)
Query: 1082 SDPTMRIDWFFNGRPFATGSRVKTVYDFGFISLDMDYVYARDSGEYICRAT----NKW-- 1135
S +D F GR G+ +L + + DSG Y R N+W
Sbjct: 54 SGDPKLVDKRFRGRAELMGNMDH-----KVCNLLLKDLKPEDSGTYNFRFEISDSNRWLD 108
Query: 1136 --GTAMT 1140
GT +T
Sbjct: 109 VKGTTVT 115
Score = 29.8 bits (67), Expect = 3.6
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 364 GMVVLEILGTKIEDTGVYTCRATNKWGQAEISVN 397
+ L + K ED+G Y R + V
Sbjct: 77 KVCNLLLKDLKPEDSGTYNFRFEISDSNRWLDVK 110
Score = 29.4 bits (66), Expect = 4.1
Identities = 8/68 (11%), Positives = 16/68 (23%), Gaps = 17/68 (25%)
Query: 6 DPNLKIEWFKNG---------------VPLSLGSRIRSTFDFGL--VTLSINSLRADDSA 48
+ W+ + V R + L + L+ +DS
Sbjct: 33 SNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKDLKPEDSG 92
Query: 49 IYTCKATN 56
Y +
Sbjct: 93 TYNFRFEI 100
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune
system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Length = 229
Score = 34.6 bits (80), Expect = 0.23
Identities = 5/18 (27%), Positives = 6/18 (33%)
Query: 35 VTLSINSLRADDSAIYTC 52
L I + D Y C
Sbjct: 75 AVLKILAPSERDEGSYYC 92
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane,
immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B*
3q5t_A
Length = 240
Score = 34.6 bits (79), Expect = 0.24
Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEISV---NLECVDKSKGQ-PPKFTSHIKSLEGLKD 423
+ + ++ED+ +Y C ++ +WG + L ++ + PPK + S + +
Sbjct: 77 MNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIAN 136
Query: 424 GDSAHFECTLTPVNDPELKVEWFHNGKPI 452
A C +++ W+ NGK +
Sbjct: 137 KQKATLVCLARGFFPDHVELSWWVNGKEV 165
Score = 30.7 bits (69), Expect = 4.2
Identities = 14/92 (15%), Positives = 28/92 (30%), Gaps = 14/92 (15%)
Query: 471 IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIR------------LPSPSQDNLDVPE 518
++ ++ DS Y C + + F + L PS+ +
Sbjct: 79 MSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIA--N 136
Query: 519 AGKVHFDCRLEPKSDPTMRIDWFFNGRPFATG 550
K C + + W+ NG+ +G
Sbjct: 137 KQKATLVCLARGFFPDHVELSWWVNGKEVHSG 168
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin,
glycosylation, immune system; HET: NAG FUC MAN GAL;
2.13A {Mus musculus}
Length = 218
Score = 34.1 bits (78), Expect = 0.24
Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 13/111 (11%)
Query: 407 QPPKFTSHIKSLEGLKDGDSAHFECTLTPV--NDPELKVEWFHNGKPIFHKNRVKMVSDF 464
PP + L + C + V +DP++++ WF N + D+
Sbjct: 15 FPPNIK------DVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDY 68
Query: 465 GFV-----VMDIAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFHQIRLPSPS 510
+ I + E+ C+ N + P + + +P
Sbjct: 69 NSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQ 119
Score = 33.8 bits (77), Expect = 0.39
Identities = 14/56 (25%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 6 DPNLKIEWFKNGVPLSLGSRIRSTFDFG-----LVTLSINSLRADDSAIYTCKATN 56
DP+++I WF N V + D+ + TL I + CK N
Sbjct: 42 DPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNN 97
Score = 32.6 bits (74), Expect = 0.86
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 15/119 (12%)
Query: 708 VFTVPLSNIDDLREGENAHFEARLT--PTDDPKLKVEWFWNGKPMKTG--SRFRTFCDFG 763
VF P + D L + DDP +++ WF N + T R +
Sbjct: 12 VFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNST 71
Query: 764 FVI---LEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQGKRSIILESQLPKGMEVFI 819
+ L I ++ C+ V + + +R+I L + +V+I
Sbjct: 72 IRVVSTLPIQHQDWMSGKEFKCK--------VNNKDLPSPIERTISKIKGLVRAPQVYI 122
Score = 31.4 bits (71), Expect = 2.2
Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 12/112 (10%)
Query: 919 FLTTPT--DLTLAESTLAHFECRLT--PTNDPSMTVEWFHNGKALSAGSRIKTINDFGFV 974
F+ P D+ + T C + +DP + + WF N + D+
Sbjct: 13 FIFPPNIKDVLMISLT-PKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNST 71
Query: 975 -----ILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVS 1021
L I + CK + + + + T+ +G+ PQV
Sbjct: 72 IRVVSTLPIQHQDWMSGKEFKCKVN--NKDLPSPIERTISKIKGLVRAPQVY 121
Score = 30.3 bits (68), Expect = 4.4
Identities = 18/90 (20%), Positives = 28/90 (31%), Gaps = 10/90 (11%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDS 426
L I + C+ NK + I + K + P+ E L
Sbjct: 77 TLPIQHQDWMSGKEFKCKVNNKDLPSPIERTI-SKIKGLVRAPQVYILPPPAEQLSRK-- 133
Query: 427 AHFECTLT-PVND---PELKVEWFHNGKPI 452
+ +LT V ++ VEW NG
Sbjct: 134 ---DVSLTCLVVGFNPGDISVEWTSNGHTE 160
Score = 29.9 bits (67), Expect = 6.2
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 144 KLLCTLTPV--NDPELKVEWFHNGKPIFHKNRVKMVSDFGFV-----VMDIAYVQSHDSG 196
K+ C + V +DP++++ WF N + D+ + I +
Sbjct: 30 KVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGK 89
Query: 197 EYVCQWFVNNKPLPA 211
E+ C+ VNNK LP+
Sbjct: 90 EFKCK--VNNKDLPS 102
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen
bonds, immune system; 1.50A {Homo sapiens} SCOP:
b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A
1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A
3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A*
...
Length = 114
Score = 32.9 bits (76), Expect = 0.26
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 13/52 (25%)
Query: 7 PNLKIEWFKN---GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P L I W GVP R S DF TL+I+SL+A+D A+Y C
Sbjct: 50 PKLLIYWASTRESGVP----DRFSGSGSGTDF---TLTISSLQAEDVAVYYC 94
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune
system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Length = 242
Score = 34.2 bits (79), Expect = 0.26
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
TL+I+++ D A Y C
Sbjct: 80 STLTIHNVEKQDIATYYC 97
>1smo_A Triggering receptor expressed on myeloid cells 1; activating
receptors, TREM-1, innate immune system receptor,
system; HET: TLA; 1.47A {Homo sapiens} SCOP: b.1.1.1
Length = 119
Score = 32.9 bits (75), Expect = 0.28
Identities = 7/20 (35%), Positives = 14/20 (70%)
Query: 33 GLVTLSINSLRADDSAIYTC 52
GL+ + + +L+ +DS +Y C
Sbjct: 74 GLLRVRMVNLQVEDSGLYQC 93
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP:
b.1.1.1 PDB: 3iy6_A
Length = 111
Score = 32.5 bits (75), Expect = 0.30
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 13/52 (25%)
Query: 7 PNLKIEW---FKNGVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P L I W GVP R S DF TL+I++++++D A Y C
Sbjct: 47 PKLLIYWASTRHTGVP----DRFTGSGSGTDF---TLTISNVQSEDLADYFC 91
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein
hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Length = 108
Score = 32.4 bits (75), Expect = 0.33
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 13/52 (25%)
Query: 7 PNLKIEW---FKNGVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P L I +GVP R S DF TL+I+S++A+D A Y C
Sbjct: 44 PKLLIFGASNRFSGVP----DRFTGSGSATDF---TLTISSVQAEDFADYHC 88
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22
protein, T cell receptor delta, immune system; HET: NAG
MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Length = 230
Score = 34.1 bits (79), Expect = 0.33
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
L+I SL +D AIY C
Sbjct: 79 SILTIYSLEEEDEAIYYC 96
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain;
immunoglobulin, immune system; 1.50A {Mus musculus}
SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Length = 111
Score = 32.5 bits (75), Expect = 0.34
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 13/52 (25%)
Query: 7 PNLKIEWFKN---GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P L I N G+P R S DF TL I+ + ADD A Y C
Sbjct: 48 PKLLIYRASNLESGIP----VRFSGTGSRTDF---TLIIDPVEADDVATYYC 92
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain,
variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Length = 116
Score = 32.6 bits (75), Expect = 0.35
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
L I+ +R +DSA Y C
Sbjct: 76 FHLVISPVRTEDSATYYC 93
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain,
human constant...; natural killer T cell receptor,
immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B
4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B
3qjh_B 3qiw_D* 3qiu_D
Length = 245
Score = 33.8 bits (77), Expect = 0.41
Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
Query: 368 LEILGTKIEDTGVYTCRATNKWG----QAEISVNLECVDKSKG-QPPKFTSHIKSLEGLK 422
L+I T +ED+ VY C ++ L ++ K PP+ S +
Sbjct: 78 LKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEIS 137
Query: 423 DGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
A C T +++ W+ NGK +
Sbjct: 138 HTQKATLVCLATGFYPDHVELSWWVNGKEV 167
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope
proteins, structural genomics, antibody epito
flavivirus, niaid; 2.50A {Mus musculus}
Length = 126
Score = 32.5 bits (75), Expect = 0.42
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 13/52 (25%)
Query: 7 PNLKIEWFKN---GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P L I N GVP +R S DF TL+I+S+ DD+A Y C
Sbjct: 48 PKLLIYLASNLESGVP----ARFSGSGSETDF---TLTIDSVETDDAATYYC 92
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating
receptors, TREM-1, innate immunity, immune system
receptor, immune system; 1.76A {Mus musculus} SCOP:
b.1.1.1
Length = 114
Score = 32.3 bits (74), Expect = 0.43
Identities = 5/20 (25%), Positives = 11/20 (55%)
Query: 33 GLVTLSINSLRADDSAIYTC 52
++ + + L+ DS +Y C
Sbjct: 74 AMLQVQMTDLQVTDSGLYRC 93
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T
cell receptor delta, immune system; HET: NAG MAN FUC;
3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Length = 207
Score = 33.4 bits (76), Expect = 0.44
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Query: 15 KNGVP-LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+NG + S+ R TL I + +DS Y C
Sbjct: 55 ENGRLKSAFDSKERRYS-----TLHIRDAQLEDSGTYFC 88
Score = 31.9 bits (72), Expect = 1.6
Identities = 22/147 (14%), Positives = 46/147 (31%), Gaps = 15/147 (10%)
Query: 346 YNGKPIEASHRIRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSK 405
NG+ A ++ L I ++ED+G Y C A + W +E
Sbjct: 55 ENGRLKSAFDSKERRYST----LHIRDAQLEDSGTYFC-AADTWHISEGYELGTDKLVFG 109
Query: 406 G------QPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVK 459
+P S+ +K+G + C + E+ + + K + +
Sbjct: 110 QGTQVTVEPKSQPPAKPSVFIMKNGTNV--ACLVKDFYPKEVTISLRSSKKIVEFDPAIV 167
Query: 460 MVSDFGFVVMDIAYVQSHDSGEYVCRA 486
+ + + + +S C
Sbjct: 168 ISPSGKYSAVKLGQYGDSNS--VTCSV 192
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D,
mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo
sapiens}
Length = 253
Score = 33.7 bits (77), Expect = 0.44
Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 13/95 (13%)
Query: 368 LEILGTKIEDTGVYTCRATNK---------WGQ-AEISVNLECVDKSKGQPPKFTSHIKS 417
L + + C ++ +G+ ++++V D PP+ S
Sbjct: 76 LRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVL---EDLKNVFPPEVAVFEPS 132
Query: 418 LEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ A C T +++ W+ NGK +
Sbjct: 133 EAEISHTQKATLVCLATGFYPDHVELSWWVNGKEV 167
Score = 30.6 bits (69), Expect = 4.7
Identities = 2/30 (6%), Positives = 5/30 (16%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+ + L + C
Sbjct: 67 LATRVTDT-----ELRLQVANMSQGRTLYC 91
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody,
dimer, SCFV, variable domain, immune system; 2.60A {Mus
musculus} SCOP: b.1.1.1 b.1.1.1
Length = 240
Score = 33.5 bits (77), Expect = 0.45
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
Query: 14 FKNGVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
++G+P+ G+ R+ F TL I+ + ADD A Y C
Sbjct: 58 LESGIPVRFSGTGSRTDF-----TLIIDPVEADDVATYYC 92
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain;
antibody-peptide complex, immunoglobulin fold, type II'
beta turn., immune system; 1.80A {Mus musculus} SCOP:
b.1.1.1 PDB: 1i8i_A
Length = 107
Score = 32.1 bits (74), Expect = 0.46
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 13/52 (25%)
Query: 7 PNLKIEW---FKNGVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
P I + GVP SR + DF +I + ++D Y C
Sbjct: 44 PKFLISEGNTLRPGVP----SRFSSSGTGTDF---VFTIENTLSEDVGDYYC 88
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG
NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Length = 423
Score = 33.9 bits (77), Expect = 0.48
Identities = 15/55 (27%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Query: 1323 CLHAVIFSHPIFDLGFVSLDIDYVYPEDQGEYVCRAYNDHGEAFTKATISCKKIP 1377
LH F+H I + P D G +VC G IS K +P
Sbjct: 370 VLHPKDFNHTD-HFSVAIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVKVLP 423
Score = 31.2 bits (70), Expect = 3.4
Identities = 10/48 (20%), Positives = 17/48 (35%)
Query: 962 GSRIKTINDFGFVILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVK 1009
+ F I I+ + DSG++ C G ++VK
Sbjct: 373 PKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVK 420
Score = 30.4 bits (68), Expect = 6.4
Identities = 10/52 (19%), Positives = 16/52 (30%)
Query: 749 PMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGEAVTSASMKVQ 800
+ F F I I + P D G + C G ++ V+
Sbjct: 369 TVLHPKDFNHTDHFSVAIFTIHRILPPDSGVWVCSVNTVAGMVEKPFNISVK 420
Score = 30.1 bits (67), Expect = 7.6
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 1489 WVYPEDSGEYLCRATNLYGMDETRAILKTTGKP 1521
+ P DSG ++C + GM E + P
Sbjct: 391 RILPPDSGVWVCSVNTVAGMVEKPFNISVKVLP 423
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.6 bits (73), Expect = 0.49
Identities = 9/26 (34%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
Query: 1165 EK--LKELE---KNYTPEEIEEDEIP 1185
EK LK+L+ K Y D P
Sbjct: 18 EKQALKKLQASLKLYAD-----DSAP 38
Score = 32.6 bits (73), Expect = 0.49
Identities = 9/26 (34%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
Query: 1241 EK--LKELE---KNYTPEEIEEDEIP 1261
EK LK+L+ K Y D P
Sbjct: 18 EKQALKKLQASLKLYAD-----DSAP 38
Score = 31.1 bits (69), Expect = 2.1
Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 19/49 (38%)
Query: 1391 KTEALIQMEAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVE 1439
+ +AL +++A++K LY + P IK +E
Sbjct: 18 EKQALKKLQASLK------------LYADD--SAPALA--IKAT---ME 47
Score = 29.5 bits (65), Expect = 6.0
Identities = 6/25 (24%), Positives = 11/25 (44%), Gaps = 8/25 (32%)
Query: 1029 KNIQKLEEAL--YRKDELIPDEEKP 1051
+ ++KL+ +L Y D P
Sbjct: 20 QALKKLQASLKLYA-----DD-SAP 38
Score = 29.1 bits (64), Expect = 8.6
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 8/29 (27%)
Query: 1537 EK--IREMEASWQ-HTPEQLVEDEKPKEA 1562
EK +++++AS + + D P A
Sbjct: 18 EKQALKKLQASLKLYAD-----DSAPALA 41
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus
musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A
1d9k_A*
Length = 110
Score = 31.8 bits (73), Expect = 0.50
Identities = 14/63 (22%), Positives = 17/63 (26%), Gaps = 15/63 (23%)
Query: 2 EPRADPNLKIEWFKN---GVPLSLGSRIRSTF-----DFGLVTLSINSLRADDSAIYTCK 53
P P L I R F +L I + DSA Y C
Sbjct: 37 FPGEGPALLISILSVSDKKED----GRFTIFFNKREKKL---SLHIADSQPGDSATYFCA 89
Query: 54 ATN 56
A+
Sbjct: 90 ASA 92
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A
1r70_B 3cm9_A
Length = 475
Score = 34.2 bits (78), Expect = 0.50
Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 12/95 (12%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKG-----QPPKFTSHIKSLEGL 421
VL +TC A + ++ L + PP E L
Sbjct: 310 VLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPP-------PSEEL 362
Query: 422 KDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKN 456
+ C + ++ V W + + +
Sbjct: 363 ALNELVTLTCLARGFSPKDVLVRWLQGSQELPREK 397
Score = 32.2 bits (73), Expect = 1.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SLR +D+A+Y C
Sbjct: 80 AYMGLSSLRPEDTAVYYC 97
Score = 31.8 bits (72), Expect = 2.7
Identities = 21/134 (15%), Positives = 39/134 (29%), Gaps = 8/134 (5%)
Query: 1661 VEFDGDPLPTIKWFREDFPITSSPDFQIH---TFSTKSILIMRQVFMEDSGVFAVIAENR 1717
T W + +S S+L F A
Sbjct: 272 TGLRDASGVTFTWTPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYP 331
Query: 1718 GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWL 1777
K +A L ++PP + ++ + LA + + K + V WL
Sbjct: 332 ESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLA----RGFSPKDVLVRWL 387
Query: 1778 KNGKKIIPDIRYKT 1791
+ ++ +P +Y T
Sbjct: 388 QGSQE-LPREKYLT 400
Score = 29.9 bits (67), Expect = 8.5
Identities = 18/124 (14%), Positives = 31/124 (25%), Gaps = 17/124 (13%)
Query: 919 FLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEI 978
L P LA + L C + + V W + L + + +
Sbjct: 353 HLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWAS--RQEPSQG 410
Query: 979 NDVYLRDSGL------------YTCKATNKH-GEATTSCKLTVKGRQGIDVEPQVSAIFA 1025
+ S L ++C H + T+ G VS + A
Sbjct: 411 TTTFAVTSILRVAAEDWKKGDTFSCMVG--HEALPLAFTQKTIDRLAGKPTHVNVSVVMA 468
Query: 1026 NATK 1029
Sbjct: 469 EVDG 472
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B,
CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin
protein binding; HET: FLC GSH; 1.70A {Mus musculus}
PDB: 3kho_A*
Length = 133
Score = 32.3 bits (74), Expect = 0.52
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCK 53
++ S + TL+I +++ +D+ IY CK
Sbjct: 70 QTQNGSVY-----TLTIQNIQYEDNGIYFCK 95
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain
FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus}
SCOP: b.1.1.1 b.1.1.1
Length = 282
Score = 33.5 bits (77), Expect = 0.52
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 6/37 (16%)
Query: 17 GVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP GS +++ +L+I+ + A+D+A Y C
Sbjct: 217 GVPARFSGSGSGTSY-----SLTISRMEAEDAATYYC 248
Score = 31.2 bits (71), Expect = 3.1
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL ++D+A+Y C
Sbjct: 107 LQLSSLTSEDTAVYYC 122
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit,
conformation-specific, amyloid, immune system; 1.54A
{Oryctolagus cuniculus}
Length = 213
Score = 33.3 bits (77), Expect = 0.53
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP GS + F TL+I+ L D+A Y C
Sbjct: 57 GVPSRFK-GSGSGTDF-----TLTISDLECADAATYYC 88
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA;
anti-CD3epsilon, T-cell receptor, signalling, IMMU;
2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B
3ldb_B*
Length = 213
Score = 33.3 bits (77), Expect = 0.53
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS + +I+SL ++D Y C
Sbjct: 57 GVPSRFS-GSGSGRDS-----SFTISSLESEDIGSYYC 88
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1,
CD172B antigen, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 136
Score = 32.2 bits (74), Expect = 0.56
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 7 PNLKIEWFKNG----VPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
I K G V R+ DF ++SI+++ D+ Y C
Sbjct: 50 GRELIYNQKEGHFPRVTTVSELTKRNNLDF---SISISNITPADAGTYYC 96
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A
{Homo sapiens} SCOP: b.1.1.1
Length = 117
Score = 31.8 bits (72), Expect = 0.57
Identities = 13/80 (16%), Positives = 22/80 (27%), Gaps = 6/80 (7%)
Query: 938 CRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF---GFVILEINDVYLRDSGLYTCKAT 994
CR + + R + +F G ++ I + DSG Y C
Sbjct: 38 CRQGARGGCITLI-SSEGYVSSKYAGRA-NLTNFPENGTFVVNIAQLSQDDSGRYKCGLG 95
Query: 995 NKHGEATTSCKLTV-KGRQG 1013
+ L V +
Sbjct: 96 INSRGLSFDVSLEVLEHHHH 115
Score = 31.0 bits (70), Expect = 1.3
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 26 IRSTFDFGLVTLSINSLRADDSAIYTC 52
+ + + G ++I L DDS Y C
Sbjct: 66 LTNFPENGTFVVNIAQLSQDDSGRYKC 92
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120,
broadly neutralizing antibody, 3B3 single chain variable
fragment, immune system; 2.50A {Homo sapiens}
Length = 256
Score = 33.5 bits (77), Expect = 0.58
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL+I + +D A+Y C
Sbjct: 213 GSGSGTDF-----TLTITRVEPEDFALYYC 237
Score = 32.3 bits (74), Expect = 1.3
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ + SLR+ D+A+Y C
Sbjct: 85 AYMELRSLRSADTAVYYC 102
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA,
IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB:
3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Length = 257
Score = 33.4 bits (77), Expect = 0.58
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 6/37 (16%)
Query: 17 GVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP GS +++ +L+I+S+ A+D+A Y C
Sbjct: 198 GVPARFSGSGSGTSY-----SLTISSMEAEDAASYFC 229
Score = 31.5 bits (72), Expect = 2.2
Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 12/39 (30%)
Query: 21 SLGSRI-------RSTFDFGLVTLSINSLRADDSAIYTC 52
SL SRI ++ L + S+ ++D+A Y C
Sbjct: 70 SLKSRISITRDTSKNQV-----YLQLKSVSSEDTATYYC 103
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor,
immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Length = 122
Score = 31.9 bits (72), Expect = 0.58
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 33 GLVTLSINSLRADDSAIYTC 52
G T+++ LR +DS Y C
Sbjct: 82 GFFTVTMTDLREEDSGHYWC 101
Score = 30.7 bits (69), Expect = 1.7
Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 5/57 (8%)
Query: 938 CRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF---GFVILEINDVYLRDSGLYTC 991
C+ V + ++ SR TI D GF + + D+ DSG Y C
Sbjct: 47 CKEASALVCIRLVT-SSKPRTMAWTSRF-TIWDDPDAGFFTVTMTDLREEDSGHYWC 101
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A
{Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A
1c5d_L 1bfo_A 3b9k_L*
Length = 210
Score = 32.9 bits (76), Expect = 0.59
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS + F TL+I+ + ADD+AIY C
Sbjct: 56 GVPARFS-GSGSGTDF-----TLTIDPVEADDTAIYFC 87
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune
system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
b.1.1.2
Length = 344
Score = 33.7 bits (77), Expect = 0.62
Identities = 10/81 (12%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Query: 372 GTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFEC 431
TK++ + + + P+ + + C
Sbjct: 206 NTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQ-VYTLPPSRDELTKNQVSLTC 264
Query: 432 TLTPVNDPELKVEWFHNGKPI 452
+ ++ VEW NG+P
Sbjct: 265 LVKGFYPSDIAVEWESNGQPE 285
Score = 31.7 bits (72), Expect = 2.0
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SLR++D+A+Y C
Sbjct: 79 AYVELSSLRSEDTAVYFC 96
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family,
SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Length = 264
Score = 33.1 bits (76), Expect = 0.62
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 7 PNLKIEWFKN---GVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
P L I W GVP GS + F TL+I S++A+D A+Y C
Sbjct: 54 PKLLISWAFTRKSGVPDRFTGSGSGTDF-----TLTIGSVKAEDLAVYYC 98
Score = 30.8 bits (70), Expect = 3.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ +NSL ++DSA Y C
Sbjct: 217 AFMQLNSLTSEDSADYYC 234
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END
product-specific receptor; RAGE, AGER, scavenger
receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3cjj_A
2l7u_A* 2e5e_A
Length = 581
Score = 33.8 bits (77), Expect = 0.63
Identities = 47/228 (20%), Positives = 73/228 (32%), Gaps = 29/228 (12%)
Query: 1587 TGYPRPRV-----MWLINGHTIVNEIVRKITATETTEMEHKGKIQERVVDASEKPAKPPV 1641
G P + W V V + T Q AS + +
Sbjct: 326 KGEIMPNIPQMSAFW-----YAVRTAVINAASGRQTVDAALAAAQTNAAAASAQNITARI 380
Query: 1642 FTKKIQPC-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMR 1700
+ C A ++ R E + + K P P + L +
Sbjct: 381 GEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLS---PQGGGPWDSVARVLPNGSLFLP 437
Query: 1701 QVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN-VGQL 1759
V ++D G+F A NR GK S V + G V S LT V N VG
Sbjct: 438 AVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTA---GVPNKVGTC 494
Query: 1760 ARFDAKISATKPLDVYWLKNGKKIIPDIRYKTLEEDN-------LFTL 1800
+ + T + W +GK ++P+ + +++E LFTL
Sbjct: 495 VSEGSYPAGT----LSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTL 538
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme,
antigen, allergen, antimic bacteriolytic enzyme,
glycosidase, hydrolase; 1.20A {Mus musculus} PDB:
3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A
1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L
1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Length = 213
Score = 33.0 bits (76), Expect = 0.64
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G+P S GS + F TLSINS+ +D +Y C
Sbjct: 57 GIPSRFS-GSGSGTDF-----TLSINSVETEDFGMYFC 88
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin
complex, scorpion toxin; 1.90A {Homo sapiens} PDB:
2ybr_A 1dql_H 3cfi_C
Length = 117
Score = 31.7 bits (73), Expect = 0.65
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 81 LQMNSLRAEDTAVYYC 96
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus
musculus}
Length = 233
Score = 33.0 bits (76), Expect = 0.65
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S S + F +I ++ ++D A Y C
Sbjct: 79 GVPSRFS-SSGYGTDF-----VFTIENMLSEDVADYYC 110
>3sob_L Antibody light chain; beta propeller, protein binding-immune system
complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Length = 237
Score = 33.0 bits (76), Expect = 0.67
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS + F TL+I+SL+ +D A Y C
Sbjct: 80 GVPSRFS-GSGSGTDF-----TLTISSLQPEDFATYYC 111
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune
system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A*
3uyp_A* 3uzv_B 1dzb_A
Length = 253
Score = 33.0 bits (76), Expect = 0.69
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS R+ F TL+IN + ADD A Y C
Sbjct: 200 GSGSRTDF-----TLTINPVEADDVATYFC 224
Score = 30.3 bits (69), Expect = 5.4
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL + D+A+Y C
Sbjct: 82 LHLSSLTSGDTAVYYC 97
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F
membrane, envelope protein, fusion protein, membrane,
trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Length = 280
Score = 33.1 bits (76), Expect = 0.72
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
SR +T +L+I L+ +D A Y C
Sbjct: 204 ASRSGNTA-----SLTITGLQPEDEADYYC 228
Score = 30.7 bits (70), Expect = 3.9
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
+ + SLR++D+A+Y C
Sbjct: 81 MDLRSLRSEDTAVYYC 96
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune
system; 2.10A {Orectolobus maculatus}
Length = 108
Score = 31.5 bits (72), Expect = 0.73
Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 21/90 (23%)
Query: 938 CRLTPTNDPSMTVEWF--HNGKALS---------AGSRIKTINDFGFVILEINDVYLRDS 986
C L T + W+ G + + + N L I D+ + DS
Sbjct: 22 CVLRDTACALDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSAS---LTIRDLRVEDS 78
Query: 987 GLYTCKATNKHGEATTSC-------KLTVK 1009
G Y CKA + T LTVK
Sbjct: 79 GTYKCKAYRRCAFNTGVGYKEGAGTVLTVK 108
Score = 30.3 bits (69), Expect = 1.9
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCKA 54
+ + +L+I LR +DS Y CKA
Sbjct: 57 ETVDEGSNSA---SLTIRDLRVEDSGTYKCKA 85
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin,
CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Length = 259
Score = 33.1 bits (76), Expect = 0.73
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL+I+SL+ +D A Y C
Sbjct: 64 GSGSATGF-----TLTISSLQPEDIATYYC 88
Score = 29.6 bits (67), Expect = 8.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SL ++DSA+Y C
Sbjct: 210 TYIQLSSLTSEDSAVYYC 227
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich,
structural genomics, PSI, protein structure initiative;
1.80A {Mus musculus} SCOP: b.1.1.4
Length = 122
Score = 31.8 bits (71), Expect = 0.74
Identities = 13/70 (18%), Positives = 21/70 (30%), Gaps = 9/70 (12%)
Query: 937 ECRLTPTNDPSMTVEWF----HNGKALSAGSRIKT----INDFGFVILEINDVYLRDSGL 988
EC + V W L G ++ T +L ++L D+G
Sbjct: 35 ECPVKYCVHRP-NVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGS 93
Query: 989 YTCKATNKHG 998
Y+C
Sbjct: 94 YSCSTNFNSQ 103
Score = 29.8 bits (66), Expect = 3.8
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 14/69 (20%)
Query: 731 LTPTDDPKLKVEWFWNGKPMKTGSRFRTFCDFGFVILEISPVYPEDCGQYSCRAYNDYGE 790
+ P+L W N +L P++ D G YSC + +
Sbjct: 58 VPLEVGPQLYTSWEENR-------------SVPVFVLHFKPIHLSDNGSYSCSTNFN-SQ 103
Query: 791 AVTSASMKV 799
+ S S+ +
Sbjct: 104 VINSHSVTI 112
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable
domain-like beta-sandwich, stalk region, immune system;
2.80A {Ictalurus punctatus}
Length = 137
Score = 31.9 bits (73), Expect = 0.76
Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 3/22 (13%)
Query: 31 DFGLVTLSINSLRADDSAIYTC 52
F L+I R DD Y C
Sbjct: 75 KF---DLNIIGAREDDGGEYFC 93
>3b9v_A Heavy chain variable domain; antibody engineering, phage display,
immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B
1fgv_H 2vh5_H*
Length = 120
Score = 31.6 bits (73), Expect = 0.76
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 81 LQMNSLRAEDTAVYYC 96
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain
amyloidosis, amyloid, immunoglobulin, protein fibril;
1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A
3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A
3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L*
1bvk_A ...
Length = 109
Score = 31.3 bits (72), Expect = 0.78
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
GVP SR S DF T +I+SL+ +D A Y C
Sbjct: 59 GVP----SRFSGSGSGTDF---TFTISSLQPEDIATYYC 90
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus
musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A
1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L
1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Length = 113
Score = 31.3 bits (72), Expect = 0.82
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 31 DFGLVTLSINSLRADDSAIYTC 52
DF TL I+ + A+D +Y C
Sbjct: 75 DF---TLKISRVEAEDLGVYFC 93
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold,
immune system; HET: AB0; 1.70A {Mus musculus} PDB:
3iy1_A
Length = 119
Score = 31.3 bits (72), Expect = 0.83
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRI---RSTFDFGLVTLSINSLRADDSAIYTC 52
G+ SR S D+ + SI++L +D+A Y C
Sbjct: 59 GIS----SRFSGSGSGRDY---SFSISNLEPEDAATYYC 90
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system;
2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Length = 112
Score = 31.5 bits (72), Expect = 0.83
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
+ + F L S++ DSA+Y C +
Sbjct: 63 ATYNKEATSF---HLQKASVQESDSAVYYCALSE 93
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single
chain FV, immune system; 2.67A {Homo sapiens}
Length = 143
Score = 31.8 bits (73), Expect = 0.84
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
G+P +R S DF TL+I++L +D A+Y C
Sbjct: 56 GIP----ARFSGSGSGTDF---TLTISNLEPEDFAVYYC 87
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane
receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A
3tfk_C 1j8h_D* 1fyt_D* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A*
2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B
3e3q_D
Length = 226
Score = 32.7 bits (74), Expect = 0.85
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 2 EPRADPNLKIEWFKNGVPLSLGSRIRSTFDFG--LVTLSINSLRADDSAIYTCKATNLLG 59
PR + ++++ + + + F L S+ DSA+Y C +
Sbjct: 47 YPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHWSDSAVYFCA----VS 102
Query: 60 EAVSTCTLKIEDRHWLLNKSLRPDALPLIEDLEKPKEVRKDEPELVFDSPVFISHLNDVE 119
+ L L + P + L K K L D F S N +
Sbjct: 103 AKGTGSKLSFGKGAKLTVSPNIQNPDPAVYQLRDSKSSDK-SVCLFTD---FDSQTNVSQ 158
Query: 120 CKENENVHFDCRVEPSKDATMK 141
K+++ D V + K
Sbjct: 159 SKDSDVYITDKCVLDMRSMDFK 180
Score = 30.8 bits (69), Expect = 3.5
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 23/118 (19%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWF--HNGKAL-------SAGSRIKTINDFG 972
+T++E C+ + + P + W+ + + L S ++ +N F
Sbjct: 15 PDARVTVSEGASLQLRCKYSYSATPYLF--WYVQYPRQGLQMLLKYYSGDPVVQGVNGFE 72
Query: 973 F--------VILEINDVYLRDSGLYTCKATNKHGEATTSCKLTVKGRQGIDVEPQVSA 1022
L V+ DS +Y C + K KL+ + V P +
Sbjct: 73 AEFSKSDSSFHLRKASVHWSDSAVYFCAVSAKGT----GSKLSFGKGAKLTVSPNIQN 126
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate
resistance, NADP, one-carbon metabolism,
oxidoreductase, trimethoprim resistance; 1.95A {Lama
glama}
Length = 115
Score = 31.3 bits (72), Expect = 0.85
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL ++D+A+Y C
Sbjct: 79 LQMNSLTSEDTAVYYC 94
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex,
scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L
3h3p_L 3lhp_L
Length = 146
Score = 31.8 bits (73), Expect = 0.94
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRI---RSTFDFGLVTLSINSLRADDSAIYTC 52
G+P +R S DF TL+I+SL +D AIY C
Sbjct: 72 GIP----ARFTGSGSGTDF---TLTISSLEPEDFAIYYC 103
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen);
2.40A {Mus musculus} SCOP: b.1.1.1
Length = 108
Score = 30.9 bits (71), Expect = 0.96
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
G+P SR S DF TL+I+SL +D A+Y C
Sbjct: 57 GIP----SRFSGSGSGTDF---TLTISSLEPEDFAMYIC 88
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion
molecule, virus entry receptor, STR genomics,
PSI-biology; 1.30A {Homo sapiens}
Length = 128
Score = 31.5 bits (71), Expect = 1.00
Identities = 8/41 (19%), Positives = 17/41 (41%)
Query: 16 NGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCKATN 56
+ V + + + TL+++ L +D YTC+
Sbjct: 74 SFVSAKQSTGQDTEAELQDATLALHGLTVEDEGNYTCEFAT 114
Score = 30.3 bits (68), Expect = 2.1
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 976 LEINDVYLRDSGLYTCK-ATNKHGEATTSCKLTV 1008
L ++ + + D G YTC+ AT G L V
Sbjct: 95 LALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128
Score = 29.6 bits (66), Expect = 4.5
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 368 LEILGTKIEDTGVYTCR-ATNKWGQAEISVNL 398
L + G +ED G YTC AT G L
Sbjct: 95 LALHGLTVEDEGNYTCEFATFPKGSVRGMTWL 126
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor
CD8AB MHC complex, immune response, membrane, MHC I,
phosphoprotein, transmembrane; 2.60A {Mus musculus}
Length = 166
Score = 31.9 bits (72), Expect = 1.00
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 36 TLSINSLRADDSAIYTCKATN 56
L++N ++ Y C +
Sbjct: 91 VLTLNKFSKENEGYYFCSVIS 111
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence,
photoprotein, luminescent protein/immune system
complex; HET: GYS; 2.15A {Lama pacos} PDB: 3miq_E*
3ogo_E*
Length = 123
Score = 31.3 bits (72), Expect = 1.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL+ +D+A+Y C
Sbjct: 83 LQMNSLKPEDTAVYYC 98
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune
system, antibody, ENA11His antibody, immunoglobulin
domain; 2.75A {Mus musculus}
Length = 254
Score = 32.4 bits (74), Expect = 1.0
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G P + GS + F TL I+ + A+D IY C
Sbjct: 99 GDPDRFT-GSGSGTDF-----TLKISRVEAEDLGIYYC 130
Score = 30.9 bits (70), Expect = 3.6
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 7/56 (12%)
Query: 8 NLKIEWFKNGVPLSLGSRIRSTFDFGLV-------TLSINSLRADDSAIYTCKATN 56
++ ++W +G G T TL++ + YTC+AT+
Sbjct: 185 DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATH 240
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked
with A synthetic...; single-chain FV, monoclonal
antibody, immunoglobulin; 1.30A {Mus musculus} PDB:
3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Length = 250
Score = 32.6 bits (75), Expect = 1.0
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + + +L+I++L +D Y C
Sbjct: 67 GSGSGTDY-----SLTISNLEQEDIGTYFC 91
>3eak_A NBBCII10-FGLA; antibody, nanobody, humanization, VHH domain,
immune system; 1.95A {Camelus dromedarius}
Length = 137
Score = 31.3 bits (72), Expect = 1.1
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 84 LQMNSLRAEDTAVYYC 99
>3qyc_A VH domain of IGG molecule; immunoglobulin V domain fold,
antibody, immune system; 1.60A {Homo sapiens} PDB:
1ieh_A 1ohq_A 2uzi_H*
Length = 146
Score = 31.5 bits (72), Expect = 1.1
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 83 LQMNSLRAEDTAVYYC 98
>3r0m_A Llama VHH A12; IG domain, immune system; 1.50A {Lama glama} PDB:
3rjq_B* 1g9e_A 1hcv_A 1shm_A 3qxw_A 3qxv_A
Length = 143
Score = 31.7 bits (73), Expect = 1.1
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 40 NSLRADDSAIYTCKATNLLGEAVSTCTLKIEDRHW 74
NSL+ +D+A+Y C A S + W
Sbjct: 84 NSLKPEDTAVYYC-AAKWRPLRYSDYPSNSDYYDW 117
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus
musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B
2uud_H*
Length = 124
Score = 31.3 bits (72), Expect = 1.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +N+LRA+D+ IY C
Sbjct: 83 LQMNTLRAEDTGIYYC 98
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid
IG-like receptor, inhibitory receptor, myelo-monocytic
cells; 2.60A {Homo sapiens}
Length = 124
Score = 31.0 bits (70), Expect = 1.1
Identities = 7/58 (12%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Query: 357 IRTVHAFGMVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQPPKFTSH 414
I+ + + D Y C ++V + +D + + +S
Sbjct: 66 IKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVT-IDPAPVTQEETSSS 122
Score = 30.3 bits (68), Expect = 2.4
Identities = 10/63 (15%), Positives = 22/63 (34%), Gaps = 9/63 (14%)
Query: 1794 EDNLFTLLIIEAVVEDSGAYECVAMNNAGEARCEAELVVQSKKAPGKQAPAPGAAVAQDE 1853
++ FT+ + + + D+ Y C + ++ + PAP
Sbjct: 71 KNRTFTVTMEDLMKTDADTYWCGIEKTGNDLGVTVQVTID---------PAPVTQEETSS 121
Query: 1854 APT 1856
+PT
Sbjct: 122 SPT 124
Score = 29.5 bits (66), Expect = 3.7
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 5/87 (5%)
Query: 938 CRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDF---GFVILEINDVYLRDSGLYTCKAT 994
CR D + V+ + + + R+ +I D + + D+ D+ Y C
Sbjct: 38 CRGAIWRDCKILVKTSGSEQEVKRD-RV-SIKDNQKNRTFTVTMEDLMKTDADTYWCGIE 95
Query: 995 NKHGEATTSCKLTVKGRQGIDVEPQVS 1021
+ + ++T+ E S
Sbjct: 96 KTGNDLGVTVQVTIDPAPVTQEETSSS 122
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system;
2.88A {Mus musculus}
Length = 291
Score = 32.7 bits (75), Expect = 1.1
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 5/30 (16%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GS + F TL+I+S++A+D A+Y C
Sbjct: 228 GSGSGTDF-----TLTISSVQAEDLAVYYC 252
Score = 30.8 bits (70), Expect = 4.7
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SL ++DSA+Y C
Sbjct: 101 AYMELSSLTSEDSAVYYC 118
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin
fold, immune surveillance of cell stress PROT A/B,
MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Length = 259
Score = 32.5 bits (74), Expect = 1.1
Identities = 6/34 (17%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 21 SLGSRIRSTFDFGL--VTLSINSLRADDSAIYTC 52
+ T+ + + + +L +DS +Y C
Sbjct: 63 GISPGKYDTYGSTRKNLRMILRNLIENDSGVYYC 96
Score = 31.3 bits (71), Expect = 2.7
Identities = 8/30 (26%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+ ++ L+I++L+ +DSA Y C
Sbjct: 200 VNFKKAAKSV---ALTISALQLEDSAKYFC 226
Score = 30.6 bits (69), Expect = 4.3
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 1795 DNLFTLLIIEAVVEDSGAYECVAMNNAGEAR---CEAELVVQSKKAPGKQAPAPGAAVAQ 1851
+++ + DSG Y C + + LVV K+ A A
Sbjct: 76 RKNLRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDG 135
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCRITG 1880
+ T A+ ++ AVTL C
Sbjct: 136 AQKVTQAQS--SVSMPVRKAVTLNCLYET 162
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein,
cytochrome C oxidase, high- resolution structure,
immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB:
1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A
1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A
1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Length = 120
Score = 31.0 bits (71), Expect = 1.2
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 10/39 (25%)
Query: 17 GVPLSLGSRIR---STFDFGLVTLSINSLRADDSAIYTC 52
GVP SR S F +L INSL +D Y C
Sbjct: 57 GVP----SRFSGSGSGTQF---SLKINSLLPEDFGSYYC 88
>2keb_A DNA polymerase subunit alpha B; DNA polymerase alpha, DNA
replication, nucleus, phosphoprote binding protein; HET:
DNA; NMR {Homo sapiens}
Length = 101
Score = 30.8 bits (69), Expect = 1.2
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 865 QLPKGMEGTIDKIA-ELEGYGHEREDRTIDKIAEL-EGYGHEREDRIEEDLGKAPEFLTT 922
Q P M + ++A EL+ +G + E+ I+K+ EL YG E + E + F T+
Sbjct: 19 QGPGSMSASAQQLAEELQIFGLDCEEALIEKLVELCVQYGQNEEGMVGELIA----FCTS 74
Query: 923 PTDLTLAESTLAHFE 937
+ L L FE
Sbjct: 75 THKVGLTSEILNSFE 89
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A
{Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Length = 121
Score = 31.0 bits (71), Expect = 1.2
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L +N L+ +D+A+Y C
Sbjct: 83 LQMNDLKPEDTAMYYC 98
Score = 29.4 bits (67), Expect = 3.7
Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Query: 374 KIEDTGVYTC-RATNKWGQ 391
K EDT +Y C + + WGQ
Sbjct: 89 KPEDTAMYYCKASGSSWGQ 107
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4,
immune system, zinc-finger, polymorphism,
metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H*
2a9m_H
Length = 153
Score = 31.4 bits (72), Expect = 1.2
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLR +D+A+Y C
Sbjct: 81 LQMNSLRTEDTAVYYC 96
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV,
allergen, antimicrobial, bacteriolytic enzyme,
glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo
sapiens} PDB: 2znw_A*
Length = 242
Score = 32.1 bits (73), Expect = 1.3
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 9/58 (15%)
Query: 4 RADPNLKIEWF-------KNGVPLSLGSRIRSTFDFG--LVTLSINSLRADDSAIYTC 52
R P ++E+ SL SRI T D L +NS+ +D+A Y C
Sbjct: 160 RKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYC 217
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2,
alzheimer'S disease, immunotherapies, APP, immune
system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B*
1h3p_L
Length = 252
Score = 32.4 bits (74), Expect = 1.3
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS + F TL I+ + A+D +Y C
Sbjct: 95 GVPDRFS-GSGSGTDF-----TLRISRVEAEDLGVYYC 126
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction,
cell membrane, cytoplasm, disulfide bond, hydrolase;
2.60A {Lama glama}
Length = 151
Score = 31.5 bits (72), Expect = 1.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 37 LSINSLRADDSAIYTC 52
L +++R DD+A Y C
Sbjct: 95 LQADNVRLDDTASYYC 110
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody,
domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP:
b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Length = 256
Score = 32.3 bits (74), Expect = 1.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
Query: 16 NGVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+GVP GS + F TL I+ + A+D +Y C
Sbjct: 181 SGVPDRFSGSGSGTDF-----TLKISRVEAEDLGVYYC 213
Score = 30.0 bits (68), Expect = 6.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SL ++DSA+Y C
Sbjct: 79 AYMQLSSLTSEDSAVYYC 96
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC,
antigen recognition, TCR-PMHC, membrane receptor
system; 2.75A {Mus musculus}
Length = 256
Score = 32.4 bits (74), Expect = 1.4
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+S F L S+ DSA+Y C
Sbjct: 67 AEFSKSDSSF---HLRKASVHRSDSAVYFC 93
Score = 30.8 bits (70), Expect = 3.7
Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 15 KNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
VP + + DF L++ S +++Y C
Sbjct: 193 IGDVPDGYKATRTTQEDF---FLTLESASPSQTSLYFC 227
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin,
CD277, immune system; 3.52A {Mus musculus}
Length = 254
Score = 32.3 bits (74), Expect = 1.4
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
Query: 17 GVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G+P GS + F TLSINS+ +D IY C
Sbjct: 193 GIPSRFSGSGSGTEF-----TLSINSVETEDFGIYFC 224
Score = 30.4 bits (69), Expect = 4.7
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 35 VTLSINSLRADDSAIYTC 52
+ ++SL +DDSA+Y C
Sbjct: 79 AYMQLSSLTSDDSAVYFC 96
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit,
conformation-specific, amyloid, immune system; 1.54A
{Oryctolagus cuniculus}
Length = 215
Score = 31.7 bits (73), Expect = 1.4
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Query: 24 SRIRSTFDFGLVTLSINSLRADDSAIYTC 52
S+ +T V L I S +D+A Y C
Sbjct: 69 SKTSTT-----VDLKITSPTTEDTATYFC 92
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the
antigen combining site superantigen FAB VH3
specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
PDB: 1hez_B 1adq_H
Length = 223
Score = 32.1 bits (74), Expect = 1.4
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 81 LQMNSLRAEDTAVYYC 96
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system;
1.63A {Mus musculus} PDB: 2ptv_A
Length = 110
Score = 30.6 bits (69), Expect = 1.4
Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 18/77 (23%)
Query: 424 GDSAHFECTLTPVNDPELKVEWFHN------------GKPIFH---KNRVKMVSDFGFVV 468
G + + P+ ++ W H K IF K RV + + G
Sbjct: 18 GSNVTLKIHKDPLGPYR-RITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGA-- 74
Query: 469 MDIAYVQSHDSGEYVCR 485
+ I+ V+ D G Y R
Sbjct: 75 LHISNVRKEDKGTYYMR 91
Score = 29.8 bits (67), Expect = 2.6
Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 12/79 (15%)
Query: 721 EGENAHFEARLTPTDDPKLK----------VEWFWNGKPMKTGSRF--RTFCDFGFVILE 768
G N + P + +E+ +N S F R + + L
Sbjct: 17 TGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALH 76
Query: 769 ISPVYPEDCGQYSCRAYND 787
IS V ED G Y R +
Sbjct: 77 ISNVRKEDKGTYYMRVLRE 95
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1;
beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus
musculus}
Length = 120
Score = 30.7 bits (70), Expect = 1.4
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 13/53 (24%)
Query: 7 PNLKIEWFKN-------GVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
L I F V + R + DF ++ I+++ +D+ Y C
Sbjct: 49 SRLLIYSFTGEHFPRVTNVSDA-TKR--NNMDF---SIRISNVTPEDAGTYYC 95
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich,
immunoglobulin fold, protein protein heteroco
alpha-beta orthogonal bundle, hydrolase-immune system
compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Length = 136
Score = 30.9 bits (71), Expect = 1.5
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 37 LSINSLRADDSAIYTC 52
L ++S++++D+AIYTC
Sbjct: 81 LRMDSVKSEDTAIYTC 96
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin
heavy chain domains, VHH, complementarity DET regions,
CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A*
1zv5_A
Length = 136
Score = 30.9 bits (71), Expect = 1.5
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +N+L+ +D+A+Y C
Sbjct: 85 LQMNNLKPEDTAMYYC 100
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell,
HLA, major histocompatibility complex class I (MHC class
I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Length = 257
Score = 31.9 bits (72), Expect = 1.5
Identities = 11/54 (20%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 743 WFWNGKPMKTGSRFRTFCDFGF-VILEISPVYPEDCGQYSCRAYNDYGEAVTSA 795
GK T D I P+ + G Y C + SA
Sbjct: 39 LHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSA 92
Score = 30.7 bits (69), Expect = 3.7
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSA 850
I P+ + G Y C + SA
Sbjct: 66 IGPMMQDLAGTYRCYGSVTHSPYQLSA 92
Score = 30.3 bits (68), Expect = 5.0
Identities = 25/159 (15%), Positives = 42/159 (26%), Gaps = 11/159 (6%)
Query: 336 GDQTMTVEFLY-NGKPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQAE 393
D L+ GK + H I H I + G Y C + +
Sbjct: 30 SDVRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQ 89
Query: 394 ISVN---LECVDKSKGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGK 450
+S L+ V + P ++ + G+S C+ D G+
Sbjct: 90 LSAPSDPLDIVITGLYEKPSLSAQPGP--TVLAGESVTLSCSSRSSYD---MYHLSREGE 144
Query: 451 PIFHKNRVKMVSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+ + F D + G Y C
Sbjct: 145 AHERRFSAGPKVNGTFQA-DFPLGPATHGGTYRCFGSFR 182
Score = 29.9 bits (67), Expect = 6.8
Identities = 11/67 (16%), Positives = 15/67 (22%), Gaps = 4/67 (5%)
Query: 938 CRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGF-VILEINDVYLRDSGLYTCKATNK 996
C GK I +D I + +G Y C +
Sbjct: 28 CWSDVRFQ---HFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVT 84
Query: 997 HGEATTS 1003
H S
Sbjct: 85 HSPYQLS 91
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein,
cytochrome C oxidase, high- resolution structure,
immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB:
1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B
1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H*
2bfv_H* 1dsf_H
Length = 127
Score = 30.9 bits (71), Expect = 1.5
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL+++D+A+Y C
Sbjct: 81 LQMSSLKSEDTAMYYC 96
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF,
virus-receptor complex, antigen, blood group antigen,
complement pathway, GPI-anchor; 14.00A {Homo sapiens}
SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Length = 316
Score = 32.2 bits (73), Expect = 1.5
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 33 GLVTLSINSLRADDSAIYTCKAT-NLLGEAVSTCTLKIEDRHW 74
G++ + S Y C ++GE CT+ ++ W
Sbjct: 265 GIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 307
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB:
2bse_D
Length = 123
Score = 30.9 bits (71), Expect = 1.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL+ +D+AIY C
Sbjct: 81 LQMNSLKPEDTAIYYC 96
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC;
1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H
2mcp_H*
Length = 220
Score = 31.7 bits (73), Expect = 1.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L ++ +R++D+A+Y C
Sbjct: 81 LQMSKVRSEDTALYYC 96
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase,
immune system; 1.60A {Camelus dromedarius} SCOP:
b.1.1.1
Length = 121
Score = 30.5 bits (70), Expect = 1.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL+ DD+A+Y C
Sbjct: 80 LQMDSLKPDDTAMYYC 95
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle
acetylcholine receptor...; immunoglobulin, immune
system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2
PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Length = 215
Score = 31.7 bits (73), Expect = 1.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 35 VTLSINSLRADDSAIYTC 52
V L +NSL+ +D+AIY C
Sbjct: 78 VFLKMNSLQTEDTAIYFC 95
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells,
immunological receptors, immunoglobulin fold; 1.70A
{Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D
2dli_A 2dl2_A 3h8n_A
Length = 201
Score = 31.8 bits (72), Expect = 1.7
Identities = 21/149 (14%), Positives = 40/149 (26%), Gaps = 7/149 (4%)
Query: 344 FLY-NGKPIEASHRIRTVHAFG-MVVLEILGTKIEDTGVYTCRATNKWGQAEISVNLECV 401
L+ G + I H I + G Y C + ++S + +
Sbjct: 39 LLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPL 98
Query: 402 DKS-KGQPPKFTSHIKSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKPIFHKNRVKM 460
D G K + + + G++ C+ D G+ +
Sbjct: 99 DIVIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYD---MYHLSREGEAHERRLPAGP 155
Query: 461 VSDFGFVVMDIAYVQSHDSGEYVCRAWNN 489
+ F D + G Y C +
Sbjct: 156 KVNGTFQA-DFPLGPATHGGTYRCFGSFH 183
Score = 31.4 bits (71), Expect = 1.7
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 767 LEISPVYPEDCGQYSCRAYNDYGEAVTSA 795
IS + + G Y C + SA
Sbjct: 65 FSISRMTQDLAGTYRCYGSVTHSPYQVSA 93
Score = 31.4 bits (71), Expect = 2.2
Identities = 19/146 (13%), Positives = 36/146 (24%), Gaps = 26/146 (17%)
Query: 1739 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWL-KNGKKIIPDIRYKTLEEDNL 1797
GV L ++ + + + + + L + G +
Sbjct: 4 GVHRKPSLLAHPGPLVKSEETVIL--QCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVS 61
Query: 1798 FTLLIIEAV-VEDSGAYECVAMNNAGEARCEA-----ELVVQSKKAPGKQAPAPGAAVAQ 1851
I + + +G Y C + A ++V+ + PG
Sbjct: 62 KANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG----- 116
Query: 1852 DEAPTVAEPLKDQNVKEGSAVTLKCR 1877
V G VTL C
Sbjct: 117 ------------PTVLAGENVTLSCS 130
Score = 31.0 bits (70), Expect = 2.6
Identities = 7/27 (25%), Positives = 10/27 (37%)
Query: 824 ISPVYPEDCGQYSCRAYNDYGEAVTSA 850
IS + + G Y C + SA
Sbjct: 67 ISRMTQDLAGTYRCYGSVTHSPYQVSA 93
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody,
VHH, RNAse A, yeast surface display, hydrolase/immune
system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B
2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B
2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Length = 123
Score = 30.5 bits (70), Expect = 1.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL+ +D+A Y C
Sbjct: 83 LQMDSLKPEDTATYYC 98
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33;
antibody, camel antibody, immune system; 1.60A {Camelus
dromedarius} PDB: 1yc8_A 1yzz_A
Length = 124
Score = 30.5 bits (70), Expect = 1.7
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL+ +D+ +Y C
Sbjct: 80 LQMNSLQREDTGMYYC 95
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN;
1.94A {Lama glama} SCOP: b.1.1.1
Length = 114
Score = 30.5 bits (70), Expect = 1.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL +D+A+Y C
Sbjct: 80 LEMNSLEPEDTAVYYC 95
>3osk_A Cytotoxic T-lymphocyte protein 4; beta sandwich, homodimer,
immunoglobulin superfamily (beta S fold, receptor,
signalling, B7-1(CD80), B7-2(CD86); HET: NAG; 1.80A
{Homo sapiens} PDB: 2x44_D 1i85_C 1ah1_A* 1i8l_C*
3bx7_C
Length = 130
Score = 30.9 bits (69), Expect = 1.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 24 SRIRSTFDFGLVTLSINSLRADDSAIYTCKATNL 57
S T V L+I LRA D+ +Y CK +
Sbjct: 66 SICTGTSSGNQVNLTIQGLRAMDTGLYICKVELM 99
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of
complement pathway, regulator of complement; 2.2A {Homo
sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB:
1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A
2qzh_A 2qzf_A
Length = 254
Score = 31.8 bits (72), Expect = 1.8
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 33 GLVTLSINSLRADDSAIYTCKAT-NLLGEAVSTCTLKIEDRHW 74
G++ + S Y C ++GE CT+ ++ W
Sbjct: 202 GIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 244
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune
system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Length = 221
Score = 31.7 bits (73), Expect = 1.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL++DD+A+Y C
Sbjct: 83 LQMNSLKSDDTAMYYC 98
>1flt_X FLT-1, VGR1, FMS-like tyrosine kinase 1; complex (growth
factor-transferase), FLT-1 receptor, cystine
glycoprotein; 1.70A {Homo sapiens} SCOP: b.1.1.4 PDB:
1qsv_A 1qsz_A 1qty_X 2xac_C 1rv6_X*
Length = 95
Score = 30.1 bits (67), Expect = 1.9
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 917 PEFLTTPTDLTLAESTLAHFECRLTPTNDPSMTVEW--FHNGKALSAGSRIKTINDFGFV 974
+ P + + E CR+T P++TV F + G RI + GF+
Sbjct: 6 EMYSEIPEIIHMTEGRELVIPCRVT---SPNITVTLKKFPLDTLIPDGKRIIWDSRKGFI 62
Query: 975 ILEINDVYLRDSGLYTCKAT 994
I ++ ++ GL TC+AT
Sbjct: 63 I---SNATYKEIGLLTCEAT 79
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S
disease, immunotherapies, APP, immune system; 1.59A
{Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H
3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H
3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H*
1n5y_H* 1n6q_H* 1t03_H* ...
Length = 228
Score = 31.7 bits (73), Expect = 1.9
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 35 VTLSINSLRADDSAIYTC 52
V + I S+ D+A Y C
Sbjct: 80 VFMKITSVDTADTATYYC 97
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid
factor IGG1-FC, immunoglobulin C region, membrane,
glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG
GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Length = 234
Score = 31.6 bits (72), Expect = 1.9
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 36 TLSINSLRADDSAIYTCKAT 55
LS+ + Y+C+ T
Sbjct: 200 YLSLTPEQWKSHRSYSCQVT 219
Score = 30.5 bits (69), Expect = 4.8
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS+ ++ +L+I+ LR++D A Y C
Sbjct: 77 GVPDRFS-GSKSGTSA-----SLAISGLRSEDEADYYC 108
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB:
2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A
1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Length = 127
Score = 30.5 bits (70), Expect = 1.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 40 NSLRADDSAIYTC 52
SL +D+A+Y C
Sbjct: 84 LSLEPEDTAVYYC 96
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein
complex, enzyme- inhibitor complex, disease mutation,
glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP:
b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Length = 257
Score = 31.7 bits (73), Expect = 1.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SLRA+D+A+Y C
Sbjct: 81 LQMSSLRAEDTAVYYC 96
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment,
anti-carbohydrate, anti-LPS, antibody, immunoglobulin,
KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus
musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B*
1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B*
2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B*
3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Length = 222
Score = 31.7 bits (73), Expect = 1.9
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +N+LRA+DSA Y C
Sbjct: 83 LQMNTLRAEDSATYYC 98
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels,
cell WALL, peptidoglycan-anchor, secreted, hydrolase;
HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Length = 937
Score = 32.2 bits (72), Expect = 2.0
Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 7/137 (5%)
Query: 1160 DSMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANE 1219
+LE Y + EE +PE + + S + +E + R N+
Sbjct: 4 HHHHHGHHHQLENLYF--QGEETAVPENSGANTELVSGESEHSTNEADKQNEGEHARENK 61
Query: 1220 STELEKHDIVTESQLPDS--MSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVTVQ 1277
+ E +E+ P S + + E PEE + + E P E + + +
Sbjct: 62 LEKAEGVATASETASPASNEAATTETAEAASAAKPEEKASEVVAETPS---AEAKPKSDK 118
Query: 1278 EAEPVRFETRVEPRVDP 1294
E E T P
Sbjct: 119 ETEAKPEATNQGDESKP 135
>3v0a_C Llama antibody F12; botulinum neurotoxin, toxin, neurotoxin
associated protein, progenitor toxin complex, VHH bound
interlocked complex; HET: MES; 2.70A {Lama glama}
Length = 152
Score = 31.0 bits (71), Expect = 2.0
Identities = 5/16 (31%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L +++L+ +D+ +Y C
Sbjct: 89 LQMSNLQPEDTGVYYC 104
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure,
peptide-carbohydrate mimicry, VA design, immune system;
1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B*
1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Length = 220
Score = 31.3 bits (72), Expect = 2.0
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +N+LRA+D+ IY C
Sbjct: 83 LQMNNLRAEDTGIYYC 98
>1r45_A Exoenzyme C3, mono-ADP-ribosyltransferase C3; binary toxin, C3
exoenzyme; 1.57A {Clostridium phage c-st} SCOP:
d.166.1.1 PDB: 1r4b_A
Length = 204
Score = 31.3 bits (70), Expect = 2.0
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Query: 840 YNDYGEAVTSASMKVQGKRSIILESQLPKGMEGTIDKIAELEGYGHERE 888
+YG TS G R I+ + ++ G +G I + + + E
Sbjct: 127 RTEYGYISTSLMSAQFGGRPIVTKFKVTNGSKGGY--IDPISYFPGQLE 173
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta
sandwich, immunoglobulin fold, protein-protein
heterocomplex; 1.50A {Camelus dromedarius} SCOP:
b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Length = 134
Score = 30.5 bits (70), Expect = 2.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL+ +D+A+Y C
Sbjct: 81 LQMNSLKPEDTALYYC 96
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition,
immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A
{Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H*
3mme_H* 2qsc_H*
Length = 248
Score = 31.3 bits (72), Expect = 2.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLR +D+A Y C
Sbjct: 80 LQMNSLRVEDTATYFC 95
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE;
2.33A {Homo sapiens}
Length = 168
Score = 30.9 bits (69), Expect = 2.2
Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 10/109 (9%)
Query: 1161 SMSAEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERA--- 1217
S++ EKL +L+K + RL +S + + +S E Q+
Sbjct: 2 SLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEMSKSISQLESLNRELQERNRILE 61
Query: 1218 NESTELEKHDIVTESQLPD-----SMSAEKLKELEKNYTP--EEIEEDE 1259
N ++ +K ++ L +E + +L+ T EE++ +
Sbjct: 62 NSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLK 110
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system
complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB:
3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H
3r06_B 3r08_H
Length = 253
Score = 31.4 bits (72), Expect = 2.3
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L ++SL+++D+A+Y C
Sbjct: 81 LQMSSLKSEDTAMYYC 96
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate
antibody, immune system; HET: MAN; 1.75A {Homo sapiens}
SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M*
1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H*
3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H
2fl5_H*
Length = 225
Score = 31.3 bits (72), Expect = 2.3
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L ++ +R +D+AIY C
Sbjct: 81 LQMHKMRVEDTAIYYC 96
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich,
immunoglobulin fold, protein-protein hetero C
alpha-beta orthogonal bundle, immune system-hydrolase
compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB:
1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Length = 137
Score = 30.5 bits (70), Expect = 2.4
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 40 NSLRADDSAIYTC 52
NSL+ +D+A+Y C
Sbjct: 84 NSLKPEDTAMYYC 96
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune
system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Length = 263
Score = 31.4 bits (72), Expect = 2.5
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 35 VTLSINSLRADDSAIYTC 52
V L +NSL+ DD+A+Y C
Sbjct: 78 VFLKMNSLQTDDTAMYYC 95
>3k81_A Single strand antibody VHH domain; krepa6, single domain
antibody, immune system, RNA BIND protein; 3.40A {Lama
glama}
Length = 127
Score = 30.1 bits (69), Expect = 2.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 37 LSINSLRADDSAIYTCKA 54
L +NSL+ +D+A+Y C A
Sbjct: 80 LQMNSLKPEDTAVYYCNA 97
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel,
hydrolase, immune system; 2.00A {Camelus dromedarius}
SCOP: b.1.1.1
Length = 127
Score = 30.1 bits (69), Expect = 2.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 40 NSLRADDSAIYTC 52
+SL+ +D+A+Y C
Sbjct: 83 DSLKPEDTAVYYC 95
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex
(immunoglobulin/hydrolase), immunoglobulin V region,
signal, hydrolase, glycosidase, bacteriolytic enzyme,
egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB:
1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B
1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H
1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Length = 116
Score = 29.8 bits (68), Expect = 2.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 21 SLGSRIRSTFDF--GLVTLSINSLRADDSAIYTC 52
+L SR+ + D V L +NSL DD+A Y C
Sbjct: 62 ALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYC 95
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme,
antigen, allergen, antimic bacteriolytic enzyme,
glycosidase, hydrolase; 1.20A {Mus musculus} PDB:
3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B
1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B
1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Length = 210
Score = 30.9 bits (71), Expect = 2.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
L +NS+ +D+A Y C
Sbjct: 78 YYLDLNSVTTEDTATYYC 95
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain;
human monoclonal antibody, FAB, third variable
antibody-antigen interaction; 1.80A {Homo sapiens} PDB:
3mls_H 3mlt_H 3mlu_H 3mlv_H
Length = 226
Score = 31.3 bits (72), Expect = 2.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Query: 37 LSINSLRADDSAIYTC 52
L +L+A D+ Y C
Sbjct: 81 LQWTTLQASDTGKYFC 96
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin,
immune recognition, influenza A hemagglutini system;
1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H
3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B
3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B
2p8m_B 2p8p_B ...
Length = 232
Score = 31.3 bits (72), Expect = 2.6
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 35 VTLSINSLRADDSAIYTC 52
V L++ ++ D+A Y C
Sbjct: 83 VVLTMTNMDPVDTATYYC 100
>1yjd_C TP44, T-cell-specific surface glycoprotein CD28; IGSF, CD28
homodimer, immune system-signaling protein comple; HET:
NAG; 2.70A {Homo sapiens} SCOP: b.1.1.1
Length = 140
Score = 30.5 bits (68), Expect = 2.6
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 15 KNGVPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTCK 53
+ V G VT + +L + + IY CK
Sbjct: 59 QLQVYSKTGFNCDGKLGNESVTFYLQNLYVNQTDIYFCK 97
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder,
immunoglobulin, immune system; HET: ENH; 1.90A {Mus
musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H*
1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H
1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Length = 219
Score = 31.3 bits (72), Expect = 2.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 37 LSINSLRADDSAIYTC 52
L IN+L+ +D A Y C
Sbjct: 81 LQINNLKNEDMATYFC 96
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment,
immune system; HET: PG4; 1.60A {Mus musculus} SCOP:
b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L*
1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L*
1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K*
1mfe_L* 1mfb_L* ...
Length = 212
Score = 31.1 bits (71), Expect = 2.7
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS I L+I + +D AIY C
Sbjct: 59 GVPARFS-GSLIGDKA-----ALTITGAQTEDEAIYFC 90
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody,
VHH, interface, binding, antibody, hydrolase; 1.90A
{Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A
2x89_A
Length = 148
Score = 30.6 bits (70), Expect = 2.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 40 NSLRADDSAIYTC 52
NSL +D+AIY C
Sbjct: 84 NSLEPEDTAIYYC 96
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related
protein; beta propeller, protein binding-immune system
complex; 1.90A {Homo sapiens} PDB: 1pkq_B
Length = 256
Score = 31.3 bits (72), Expect = 2.7
Identities = 10/16 (62%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSLRA+D+A+Y C
Sbjct: 104 LQMNSLRAEDTAVYYC 119
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B,
IG-beta, BCR, immunoglobulin domain, protein binding;
3.20A {Homo sapiens}
Length = 134
Score = 30.0 bits (68), Expect = 2.7
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCKA 54
S+ S TL+I +R +D+ IY C+
Sbjct: 73 ESQNESLA-----TLTIQGIRFEDNGIYFCQQ 99
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex,
echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo
sapiens}
Length = 381
Score = 31.6 bits (71), Expect = 2.7
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 33 GLVTLSINSLRADDSAIYTCKAT-NLLGEAVSTCTLKIEDRHW 74
G++ + S Y C ++GE CT+ ++ W
Sbjct: 234 GIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 276
>3g9a_B Minimizer; antibody complex, chromophore, luminescence,
photoprotein, fluorescent protein/immune system
complex, nanobody; HET: GYS; 1.61A {Lama pacos}
Length = 139
Score = 30.2 bits (69), Expect = 2.7
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 40 NSLRADDSAIYTC 52
+L+++D+A Y C
Sbjct: 85 VNLKSEDTARYYC 97
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor,
cell adhesion, integrin ligand, glycopr LFA-1 ligand,
immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP:
b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Length = 185
Score = 30.8 bits (69), Expect = 2.8
Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 28/172 (16%)
Query: 922 TPTDLTLAESTLAHFECRLTPTNDPSMTVEWFHNGKALSAGSRIKTINDFGFVILEINDV 981
+P+ + L C + + +E K L + E+++V
Sbjct: 5 SPSKVILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGN-------NRKVYELSNV 57
Query: 982 YLRDSGLYTCKATNKHGEATTSCKLTVKGR-QGIDVEPQVSAIFANATKNI--------- 1031
++ C + G++T LTV + +++ P S +
Sbjct: 58 --QEDSQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAP 115
Query: 1032 -QKLEEALYRKDELI---PDEEKPNPPVFTSQLQDNLDVPEAGKVHFDCRLE 1079
+L L R ++ + P +P T ++ + F CR E
Sbjct: 116 RAQLTVVLLRGEKELKREPAVGEPAEVTTTVLVR-----RDHHGAQFSCRTE 162
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing
antibody, immun anti-WEST NIle virus; 1.43A {Homo
sapiens} PDB: 3iyw_H 3qeh_A 3u0t_D 3c08_H 3lmj_H
3lqa_H* 3c09_H* 3pp4_H 3pp3_H 2jb5_H* 2jb6_B* 2eh7_H
2eh8_H 3jwd_H* 3jwo_H* 3t2n_H 3qot_H 3ma9_H 3nfs_H
3nfp_A ...
Length = 230
Score = 30.9 bits (71), Expect = 2.9
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 37 LSINSLRADDSAIYTC 52
+ ++SLR++D+A+Y C
Sbjct: 81 MELSSLRSEDTAVYYC 96
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1;
1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Length = 127
Score = 30.1 bits (69), Expect = 2.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
L +NSL+ +D+A+Y C
Sbjct: 86 LQMNSLKPEDTAVYYC 101
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1
GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Length = 267
Score = 31.3 bits (72), Expect = 3.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 37 LSINSLRADDSAIYTC 52
+ + L ADD+AIY C
Sbjct: 104 MELRGLTADDTAIYYC 119
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold,
toxin-immune system complex; 2.95A {Rattus norvegicus}
Length = 125
Score = 29.9 bits (68), Expect = 3.1
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 4/30 (13%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
SR +F +L + +++Y C
Sbjct: 71 ASRPSQE-NF---SLILELATPSQTSVYFC 96
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune
system-viral protein complex, envelope protein; HET:
NAG; 2.05A {Mus musculus}
Length = 261
Score = 31.0 bits (71), Expect = 3.2
Identities = 7/16 (43%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
+ ++SL ++DSA+Y C
Sbjct: 87 IQLSSLTSEDSAVYYC 102
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis,
esterolytic, FAB, immune system; 1.22A {Mus musculus}
SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H
1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C
1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B
1cfn_B ...
Length = 227
Score = 30.9 bits (71), Expect = 3.4
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 37 LSINSLRADDSAIYTC 52
+ ++SL +DDSA+Y C
Sbjct: 81 MQLSSLTSDDSAVYYC 96
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1
neutralizing antibody, GP120, immune system; HET: PCA
MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H*
3tje_H* 3thm_H* 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H
3mlz_H 2ykl_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H 3hi1_H*
3uc0_H 3uaj_H 3q1s_H 3fn0_H ...
Length = 239
Score = 30.9 bits (71), Expect = 3.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 37 LSINSLRADDSAIYTC 52
L +NS+ A D+A Y C
Sbjct: 88 LKLNSVTAADTATYYC 103
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus
musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A
1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B
2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B*
2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Length = 238
Score = 30.7 bits (69), Expect = 3.5
Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 6/91 (6%)
Query: 368 LEILGTKIEDTGVYTCRATNKWGQAEI------SVNLECVDKSKGQPPKFTSHIKSLEGL 421
L + T VY C + G + D + PPK + S +
Sbjct: 74 LILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEI 133
Query: 422 KDGDSAHFECTLTPVNDPELKVEWFHNGKPI 452
+ A C +++ W+ NGK +
Sbjct: 134 ANKQKATLVCLARGFFPDHVELSWWVNGKEV 164
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human,
immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1
b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Length = 232
Score = 30.9 bits (71), Expect = 3.5
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 37 LSINSLRADDSAIYTC 52
L ++S+ A D+A+Y C
Sbjct: 80 LKLSSVTAADTAVYYC 95
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo
sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A*
2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L
2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L*
3qeg_L ...
Length = 216
Score = 30.7 bits (70), Expect = 3.6
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G+P S GS+ ++ TL I L+ D A Y C
Sbjct: 58 GIPDRFS-GSKSGTSA-----TLGITGLQTGDEADYYC 89
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex
(immunorece immunoglobulin) complex; HET: NAG NDG;
2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Length = 212
Score = 30.7 bits (70), Expect = 3.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
G+P S GS +T TL+I+ + +D A Y C
Sbjct: 55 GIPERFS-GSTSGTTA-----TLTISGAQPEDEAAYYC 86
>1dqt_A CTLA4, cytotoxic T lymphocyte associated antigen 4;
immunoglobulin variable domain-like beta-sandwich,
homodimer, immune system; 2.00A {Mus musculus} SCOP:
b.1.1.1
Length = 117
Score = 29.6 bits (66), Expect = 3.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTCK 53
TF+ V L+I LRA D+ +Y CK
Sbjct: 63 YPFCSGTFNESRVNLTIQGLRAVDTGLYLCK 93
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp
contractIle protein-transport protein complex; 24.00A
{Gallus gallus}
Length = 1080
Score = 31.2 bits (71), Expect = 3.8
Identities = 13/85 (15%), Positives = 34/85 (40%)
Query: 1164 AEKLKELEKNYTPEEIEEDEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERANESTEL 1223
++ L++ E + E + + K ++++ SEL E E EL
Sbjct: 983 TNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLKTEKEEL 1042
Query: 1224 EKHDIVTESQLPDSMSAEKLKELEK 1248
+ ++ ++M + ++E ++
Sbjct: 1043 NRRIHDQAKEITETMEKKLVEETKQ 1067
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune
system; NMR {Mus musculus}
Length = 551
Score = 31.2 bits (70), Expect = 3.9
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 10/111 (9%)
Query: 347 NGKPIEASHRIRTVHAFGMV----VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVD 402
+ + A + R L I+ + + CR + A I + +
Sbjct: 385 DVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIE---KTIS 441
Query: 403 KSKGQPPKFTSHI--KSLEGLKDGDSAHFECTLTPVNDPELKVEWFHNGKP 451
K+KG+P + E + D C +T ++ VEW NG+P
Sbjct: 442 KTKGRPKAPQLYTIPPPKEQMAK-DKVSLTCMITDFFPEDITVEWQWNGQP 491
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate
immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus
musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C*
3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C*
3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C*
3sdc_C* ...
Length = 229
Score = 30.8 bits (69), Expect = 3.9
Identities = 10/52 (19%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 471 IAYVQSHDSGEYVCRAWNN--FIFIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
I D+ Y C + +F + + I+ P P+ L P +
Sbjct: 77 ITATLLDDTATYFCVVGDRGSALFGSGTQLIVIPYIQNPEPAVYQLKDPRSQ 128
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like
receptor, structural genomics, PSI, protein structure
initiative; 2.10A {Mus musculus}
Length = 113
Score = 29.3 bits (66), Expect = 4.6
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 33 GLVTLSINSLRADDSAIYTC 52
+ T+++ LR D+ IY C
Sbjct: 72 FIFTVTMEDLRMSDAGIYWC 91
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A
{Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D
3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Length = 206
Score = 30.3 bits (68), Expect = 4.8
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Query: 15 KNGVPLSL-GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
N SL + R + TL ++ D+A+Y C
Sbjct: 54 VNNRMASLAIAEDRKSS-----TLILHRATLRDAAVYYC 87
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold,
diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Length = 238
Score = 30.5 bits (69), Expect = 4.9
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+ +L I + DSA Y C
Sbjct: 190 IFFNKREKKL---SLHIADSQPGDSATYFC 216
Score = 30.1 bits (68), Expect = 5.2
Identities = 3/18 (16%), Positives = 8/18 (44%)
Query: 35 VTLSINSLRADDSAIYTC 52
+L + +++Y C
Sbjct: 73 FSLILELATPSQTSVYFC 90
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain,
immunoglobulin superfamily, immune system,
transmembrane, paired receptor; 1.19A {Homo sapiens}
PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Length = 127
Score = 29.2 bits (66), Expect = 5.2
Identities = 12/50 (24%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 7 PNLKIEWFKNG----VPLSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
I K G V R+ DF ++SI+++ D+ Y C
Sbjct: 45 GRELIYNQKEGHFPRVTTVSELTKRNNLDF---SISISNITPADAGTYYC 91
>1f5v_A Oxygen-insensitive NADPH nitroreductase; flavoprotein,
oxidoreduction, nitrocompound, oxidoreductase; HET: FMN;
1.70A {Escherichia coli} SCOP: d.90.1.1
Length = 240
Score = 30.3 bits (69), Expect = 5.3
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
Query: 1182 DEIPEEPPRLNQS------RYKKQNQS--AWYDSELSEYQKERANESTE 1222
+ P+ PRL S Y+ ++ A YD +L+EY R + +
Sbjct: 161 ADNPDLKPRLPASILVHENSYQPLDKGALAQYDEQLAEYYLTRGSNNRR 209
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1
neutralizing antibody, GP120, immune system; HET: PCA
MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L*
2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A*
1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A
1mcl_A* 1mcn_A* 1mcq_A 1mcr_A ...
Length = 211
Score = 30.1 bits (68), Expect = 5.7
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 8/38 (21%)
Query: 17 GVP--LSLGSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
GVP S GS+ +T +L+++ L+ DD A+Y C
Sbjct: 54 GVPDRFS-GSKSGNTA-----SLTVSGLQTDDEAVYYC 85
>2zxt_A Maltose-binding periplasmic protein, linker, MITO intermembrane space
import AND...; disulfide bond, alpha helix, fusion, sugar
transport; HET: MAL; 3.00A {Escherichia coli}
Length = 465
Score = 30.6 bits (69), Expect = 5.8
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 1524 IYESQLPKGMKSIEKIREMEASWQHTPE----QLVEDEKPKEA 1562
+Y PKG+ +EK + M+ ++ PE QL E +E
Sbjct: 419 VYSEAEPKGIDCVEKFQHMQDCFRKYPEHYAEQLKETSDDEEP 461
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural
genomics, protein structure initiative, nysgxrc; 2.80A
{Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Length = 541
Score = 30.5 bits (69), Expect = 6.1
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 20/130 (15%)
Query: 1159 PDSMSAEKLKELEKNYTPEEIEE-DEIPEEPPRLNQSRYKKQNQSAWYDSELSEYQKERA 1217
P +S E N E+ + +E L SR++K + E K +
Sbjct: 411 PHGLSPRTEGEWSFNAEETEVADSEENKNTDQHLATSRWRK------FSREWIRTAKSDS 464
Query: 1218 NESTELEKHDIVTESQL--PDSMSAEKLKELEKNYTPEEIEEDEIPEEPPRFITEIESVT 1275
+ + L+ D + L PD ++AE + EL + E++ + E+ +
Sbjct: 465 LDISWLKDKDSIDADSLPEPDVLAAEAMGELVQ--ALSELDA---------LMRELGASD 513
Query: 1276 VQEAEPVRFE 1285
+ + E
Sbjct: 514 EADLQRQLLE 523
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus}
SCOP: b.1.1.1 b.1.1.2
Length = 185
Score = 29.8 bits (67), Expect = 6.4
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 24 SRIRSTFD--FGLVTLSINSLRADDSAIYTCKATN 56
R F+ +L I + DSA Y C A++
Sbjct: 59 GRFTIFFNKREKKFSLHIADSQPGDSATYFCAASD 93
Score = 29.5 bits (66), Expect = 7.5
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 471 IAYVQSHDSGEYVCRAWNNFIFIPPFPIFIFH-QIRLPSPS 510
IA Q DS Y C A +N IF + I+ P P+
Sbjct: 76 IADSQPGDSATYFCAASDNRIFFGDGTQLVVKPNIQNPEPA 116
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold,
antibody, immune system; NMR {Homo sapiens}
Length = 376
Score = 30.3 bits (67), Expect = 6.7
Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 4/87 (4%)
Query: 367 VLEILGTKIEDTGVYTCRATNKWGQAEISVNLECVDKSKGQP-PKFTSHIKSLEGLKDGD 425
L I+ + + CR + A I + K+KG+P I + D
Sbjct: 234 ELPIMHQDWLNGKEFKCRVNSAAFPAPIEK---TISKTKGRPKAPQLYTIPPPKEQMAKD 290
Query: 426 SAHFECTLTPVNDPELKVEWFHNGKPI 452
C +T ++ VEW NG+P
Sbjct: 291 KVSLTCMITDFFPEDITVEWQWNGQPA 317
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus,
PP65, T cell receptor (TCR), immune response, public
response; 2.80A {Homo sapiens}
Length = 199
Score = 29.5 bits (66), Expect = 6.9
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 471 IAYVQSHDSGEYVCRAW--NNFIFIPPFPIFIFHQIRLPSPSQDNLDVPEAG 520
I Q DS Y+C N F F + + I+ P P+ L ++
Sbjct: 76 IKGSQPEDSATYLCARNTGNQFYFGTGTSLTVIPNIQNPDPAVYQLRDSKSS 127
Score = 29.5 bits (66), Expect = 8.6
Identities = 7/30 (23%), Positives = 10/30 (33%), Gaps = 3/30 (10%)
Query: 23 GSRIRSTFDFGLVTLSINSLRADDSAIYTC 52
+ L I + +DSA Y C
Sbjct: 63 ATLNTKEGYS---YLYIKGSQPEDSATYLC 89
>1uvq_A HLA class II histocompatibility antigen; immunology, MHC class II,
diabetes, narcolepsy, autoimmune disease, structural
proteomics in europe, spine, structural genomics; HET:
NAG FUC BMA; 1.8A {Homo sapiens} SCOP: b.1.1.2 d.19.1.1
PDB: 3pl6_A* 4d8p_A 1s9v_A 2nna_A 1jk8_A*
Length = 197
Score = 29.4 bits (66), Expect = 8.4
Identities = 10/71 (14%), Positives = 20/71 (28%), Gaps = 3/71 (4%)
Query: 1399 EAAIKKYTSEIYLTEDDLYEPEKKQPPRFVTQIKTQDQLVEMQSTKFECQLAPVGDPNMK 1458
A+ K+ I + + + P V + P P +
Sbjct: 65 NMAVAKHNLNIMIKRYNSTAATNEVPEVTVFSKSPVTLGQPNTLICLVDNIFP---PVVN 121
Query: 1459 VEWFLNGKPLP 1469
+ W NG+ +
Sbjct: 122 ITWLSNGQSVT 132
>2jjs_C Leukocyte surface antigen CD47; signal regulatory protein alpha,
immunoglobulin superfamily, transmembrane,
phosphoprotein, paired receptor; HET: NAG; 1.85A {Homo
sapiens} PDB: 2jjt_C* 2vsc_A*
Length = 127
Score = 28.6 bits (63), Expect = 8.7
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 17/91 (18%)
Query: 1 VEPRADPNLKIEWFKNGVPLSL--GSRIRSTFDF--------------GLVTLSINSLRA 44
+E + + ++W G + G+ +ST G +L ++ A
Sbjct: 28 MEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDA 87
Query: 45 -DDSAIYTCKATNLLGEAVSTCTLKIEDRHW 74
+ YTC+ T L E + LK W
Sbjct: 88 VSHTGNYTCEVTELTREGETIIELKYRVVSW 118
Score = 28.6 bits (63), Expect = 9.7
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 17/87 (19%)
Query: 940 LTPTNDPSMTVEWFHNGKALSA--GSRIKTINDFGFVILEI-------NDVYLR------ 984
+ N + V+W G+ + G+ K+ F +I D L+
Sbjct: 28 MEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDA 87
Query: 985 --DSGLYTCKATNKHGEATTSCKLTVK 1009
+G YTC+ T E T +L +
Sbjct: 88 VSHTGNYTCEVTELTREGETIIELKYR 114
>1bkj_A NADPH-flavin oxidoreductase; luminescence, flavoprotein; HET: FMN;
1.80A {Vibrio harveyi} SCOP: d.90.1.1 PDB: 2bkj_A*
Length = 240
Score = 29.6 bits (67), Expect = 8.9
Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 8/45 (17%)
Query: 1182 DEIPEEPPRLNQS------RYKKQNQS--AWYDSELSEYQKERAN 1218
D+ PE PRL +Y++ N YD + Y R +
Sbjct: 161 DQNPEVKPRLPAHVVVHENQYQELNLDDIQSYDQTMQAYYASRTS 205
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.407
Gapped
Lambda K H
0.267 0.0814 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 29,502,086
Number of extensions: 1874279
Number of successful extensions: 14502
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10428
Number of HSP's successfully gapped: 4358
Length of query: 1884
Length of database: 6,701,793
Length adjustment: 108
Effective length of query: 1776
Effective length of database: 3,686,325
Effective search space: 6546913200
Effective search space used: 6546913200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (28.7 bits)