BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2152
(205 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29EP6|JIP3_DROPS JNK-interacting protein 3 OS=Drosophila pseudoobscura pseudoobscura
GN=syd PE=3 SV=2
Length = 1235
Score = 241 bits (614), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 159/203 (78%), Gaps = 14/203 (6%)
Query: 6 ETVYGTHDDSHIVMSEK-------VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLE 58
ETVYGT +D+++VMSEK VQ LAGSIYQEFE+MI +YDEDVVK+LMPL+VNVLE
Sbjct: 19 ETVYGT-EDNNMVMSEKNDQVVSIVQQLAGSIYQEFERMINRYDEDVVKNLMPLLVNVLE 77
Query: 59 SLDLAFTENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNS 118
LD ++ NQE +VELELLREDNEQLVTQYEREK RK ++QKL + ED E + KEL +
Sbjct: 78 CLDASYRINQEQDVELELLREDNEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELAT 137
Query: 119 KIESLESIVRMLELKSKNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKL 178
++ES+ESIVRMLELK KN+ +H RLEE+E +LKKEY+ LHERYTEL K H++Y+ERTK+
Sbjct: 138 RLESVESIVRMLELKHKNSLEHASRLEERETDLKKEYNKLHERYTELFKNHVDYMERTKM 197
Query: 179 MMG------SGSSDRMDSRPPRL 195
+MG S +SDRM+ RL
Sbjct: 198 LMGSTHSQMSTASDRMEVSRARL 220
>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1
SV=1
Length = 1227
Score = 239 bits (611), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/203 (62%), Positives = 159/203 (78%), Gaps = 14/203 (6%)
Query: 6 ETVYGTHDDSHIVMSEK-------VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLE 58
ETVYGT +D+++VMSEK VQ LAGSIYQEFE+MI +YDEDVVK+LMPL+VNVLE
Sbjct: 19 ETVYGT-EDNNMVMSEKNEQVVSIVQQLAGSIYQEFERMINRYDEDVVKNLMPLLVNVLE 77
Query: 59 SLDLAFTENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNS 118
LD ++ NQE +VE+ELLREDNEQLVTQYEREK RK ++QKL + ED E + KEL +
Sbjct: 78 CLDASYRINQEQDVEVELLREDNEQLVTQYEREKSARKQSEQKLLEAEDLAEQENKELAT 137
Query: 119 KIESLESIVRMLELKSKNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKL 178
++ES+ESIVRMLELK KN+ +H RLEE+E +LKKEY+ LHERYTEL K H++Y+ERTK+
Sbjct: 138 RLESVESIVRMLELKHKNSLEHASRLEEREADLKKEYNKLHERYTELFKNHVDYMERTKM 197
Query: 179 MMG------SGSSDRMDSRPPRL 195
+MG S +S+RMD RL
Sbjct: 198 LMGSTHSQMSTASERMDVSRARL 220
>sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens
GN=SPAG9 PE=1 SV=4
Length = 1321
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/191 (59%), Positives = 151/191 (79%), Gaps = 2/191 (1%)
Query: 1 MELDQETVYGTH-DDSHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLES 59
MEL+ VY S VMSE+V LAGSIY+EFE++I +YDE+VVK+LMPLVV VLE+
Sbjct: 1 MELEDGVVYQEEPGGSGAVMSERVSGLAGSIYREFERLIGRYDEEVVKELMPLVVAVLEN 60
Query: 60 LDLAFTENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSK 119
LD F ++QEH+VELELLR+DNEQL+TQYEREK LRK A++K + ED+ E +KK+L ++
Sbjct: 61 LDSVFAQDQEHQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTR 120
Query: 120 IESLESIVRMLELKSKNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKLM 179
+ESLES R LELK+KN +D + RLEE+E ELKKEY+ LH+R+TE++ +ME++ERTKL
Sbjct: 121 VESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180
Query: 180 MGSGSSDRMDS 190
SG SD+++S
Sbjct: 181 QLSG-SDQLES 190
>sp|Q58A65|JIP4_MOUSE C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus
GN=Spag9 PE=1 SV=2
Length = 1321
Score = 216 bits (551), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 146/185 (78%), Gaps = 1/185 (0%)
Query: 1 MELDQETVYGTH-DDSHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLES 59
MEL+ VY S VMSE+V LAGSIY+EFE++I +YDE+VVK+LMPLVV VLE+
Sbjct: 1 MELEDGVVYQEEPGGSGAVMSERVSGLAGSIYREFERLIGRYDEEVVKELMPLVVAVLEN 60
Query: 60 LDLAFTENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSK 119
LD F ++QEH+VELELLR+DNEQL+TQYEREK LRK A++K + ED+ E +KK+L ++
Sbjct: 61 LDSVFAQDQEHQVELELLRDDNEQLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTR 120
Query: 120 IESLESIVRMLELKSKNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKLM 179
+ESLES R LELK+KN +D + RLEE+E ELKKEY+ LH+R+TE++ +ME++ERTKL
Sbjct: 121 VESLESQTRQLELKAKNYADQISRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLH 180
Query: 180 MGSGS 184
SGS
Sbjct: 181 QLSGS 185
>sp|Q9ESN9|JIP3_MOUSE C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus
GN=Mapk8ip3 PE=1 SV=1
Length = 1337
Score = 216 bits (551), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 141/180 (78%)
Query: 15 SHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFTENQEHEVEL 74
S VMSE+V LAGSIY+EFE++I YDE+VVK+LMPLVVNVLE+LD +ENQEHEVEL
Sbjct: 21 SGSVMSERVSGLAGSIYREFERLIHCYDEEVVKELMPLVVNVLENLDSVLSENQEHEVEL 80
Query: 75 ELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSKIESLESIVRMLELKS 134
ELLREDNEQL+TQYEREK LRK A++K + EDALE +KKEL ++E E R LELK+
Sbjct: 81 ELLREDNEQLLTQYEREKALRKQAEEKFIEFEDALEQEKKELQIQVEHYEFQTRQLELKA 140
Query: 135 KNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKLMMGSGSSDRMDSRPPR 194
KN +D + RLEE+E E+KKEY+ LH+R+TE+++T++E+IER+K+ GS S P R
Sbjct: 141 KNYADQISRLEERESEMKKEYNALHQRHTEMIQTYVEHIERSKMQQVGGSGQTESSLPGR 200
>sp|Q9UPT6|JIP3_HUMAN C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens
GN=MAPK8IP3 PE=1 SV=3
Length = 1336
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 142/180 (78%)
Query: 15 SHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFTENQEHEVEL 74
S VMSE+V LAGSIY+EFE++I YDE+VVK+LMPLVVNVLE+LD +ENQEHEVEL
Sbjct: 21 SGSVMSERVSGLAGSIYREFERLIHCYDEEVVKELMPLVVNVLENLDSVLSENQEHEVEL 80
Query: 75 ELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSKIESLESIVRMLELKS 134
ELLREDNEQL+TQYEREK LR+ A++K + EDALE +KKEL ++E E R LELK+
Sbjct: 81 ELLREDNEQLLTQYEREKALRRQAEEKFIEFEDALEQEKKELQIQVEHYEFQTRQLELKA 140
Query: 135 KNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKLMMGSGSSDRMDSRPPR 194
KN +D + RLEE+E E+KKEY+ LH+R+TE+++T++E+IER+K+ G+S S P R
Sbjct: 141 KNYADQISRLEERESEMKKEYNALHQRHTEMIQTYVEHIERSKMQQVGGNSQTESSLPGR 200
>sp|P34609|JIP_CAEEL JNK-interacting protein OS=Caenorhabditis elegans GN=unc-16 PE=1
SV=3
Length = 1157
Score = 210 bits (535), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 143/197 (72%), Gaps = 4/197 (2%)
Query: 6 ETVYGT--HDDSHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLA 63
E VYG D H MS+KVQ++A +IY+E E MI + ED VK LMPLVVNVLE+LDLA
Sbjct: 22 EIVYGGPGSPDEHRTMSDKVQTMASAIYRELETMIKVHGEDGVKTLMPLVVNVLEALDLA 81
Query: 64 FTENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSKIESL 123
+ E E ELE+L+EDNEQL TQYEREK LRK +QK +IED L KEL+ KIESL
Sbjct: 82 YLERDEQTAELEMLKEDNEQLQTQYEREKALRKQTEQKYIEIEDTLIGQNKELDKKIESL 141
Query: 124 ESIVRMLELKSKNASDHVYRLEEKEQELKKEYSILHERYTELLKTHMEYIERTKLMMGSG 183
ESI+RMLELK+KNA+DH RLEE+E E K E+ LHERY LL+TH++++ERTK +MGS
Sbjct: 142 ESIMRMLELKAKNATDHASRLEEREVEQKLEFDRLHERYNTLLRTHVDHMERTKYLMGSE 201
Query: 184 SSDRMDSRPPRLPSMGL 200
+ M + P LP+M L
Sbjct: 202 KFELMQNMP--LPNMQL 216
>sp|O76878|RIPL_DROME RILP-like protein homolog OS=Drosophila melanogaster GN=CG11448
PE=2 SV=1
Length = 443
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 6 ETVYGTHDDSHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFT 65
E V DD +V V LA I +E+E+++ ++ D V LMP ++N LE L+ T
Sbjct: 11 EMVLDAIDDIGVV---DVYDLASDIGKEYERIMDRFGTDAVSGLMPKIINTLELLEALAT 67
Query: 66 ENQEHEVELELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSKIESLE 124
+N+ ++ LR+ QL ++ + + R+ D++L IE+ + EL + SL+
Sbjct: 68 KNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNELVDLVSSLQ 126
>sp|Q5ND29|RILP_MOUSE Rab-interacting lysosomal protein OS=Mus musculus GN=Rilp PE=1
SV=1
Length = 369
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 20 SEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAF---------TENQEH 70
+E V LAG++ E + + ++ D L+PLVV LE L+ A Q+
Sbjct: 24 AELVYHLAGALGTELQGLARRFGPDAAAGLVPLVVRALELLEKAAVGPAPDSLQVSAQQA 83
Query: 71 EVELELLREDNEQL 84
EVEL LRE+N++L
Sbjct: 84 EVELRRLREENQRL 97
>sp|A0PJP4|RIPL1_XENTR RILP-like protein 1 OS=Xenopus tropicalis GN=rilpl1 PE=2 SV=1
Length = 394
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 23 VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFTEN 67
V +A ++ QEFE++I +Y +V+ LMP VV VLE L++ + N
Sbjct: 19 VYDIASAVGQEFERVIDQYGCEVIGRLMPKVVRVLEILEVLVSRN 63
>sp|Q0IHE5|RIPL1_XENLA RILP-like protein 1 OS=Xenopus laevis GN=rilpl1 PE=2 SV=1
Length = 394
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 23 VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFTEN 67
V +A ++ QEFE++I +Y +V+ LMP VV VLE L++ + N
Sbjct: 19 VYDIASAVGQEFERVIDQYGCEVIGRLMPKVVRVLEILEVLVSRN 63
>sp|Q5EBL4|RIPL1_HUMAN RILP-like protein 1 OS=Homo sapiens GN=RILPL1 PE=1 SV=1
Length = 403
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 23 VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDL 62
V +A + EFE++I ++ + + LMP VV VLE L++
Sbjct: 27 VYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEV 66
>sp|D3ZUQ0|RIPL1_RAT RILP-like protein 1 OS=Rattus norvegicus GN=Rilpl1 PE=1 SV=1
Length = 406
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 23 VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDL 62
V +A + EFE++I ++ + + LMP VV VLE L++
Sbjct: 27 VYDIASLVGHEFERVIDQHGCEAIARLMPKVVRVLEILEV 66
>sp|Q96NA2|RILP_HUMAN Rab-interacting lysosomal protein OS=Homo sapiens GN=RILP PE=1
SV=1
Length = 401
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 26 LAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLA 63
LAG++ E + + ++ + L+PLVV LE L+ A
Sbjct: 31 LAGALGTELQDLARRFGPEAAAGLVPLVVRALELLEQA 68
>sp|Q9JJC6|RIPL1_MOUSE RILP-like protein 1 OS=Mus musculus GN=Rilpl1 PE=1 SV=1
Length = 406
Score = 30.8 bits (68), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 23 VQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDL 62
V +A + EFE++I ++ + + LMP VV VLE L++
Sbjct: 27 VYDIASLVGHEFERVIDQHGCESIARLMPKVVRVLEILEV 66
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
Length = 1829
Score = 30.8 bits (68), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 48/93 (51%), Gaps = 20/93 (21%)
Query: 89 EREKQLRKAADQKLFQIEDALEDDKKELNSKIESLESI-----------------VRMLE 131
ER K+L + K+ Q++ +++ KE S +E + ++ +RM E
Sbjct: 917 ERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVERLRMSE 976
Query: 132 LKSKNASDHVYRLEEKEQELKKEYSILHERYTE 164
++KNA++ V L+E+ +L+KE LH+ TE
Sbjct: 977 EEAKNATNRVLSLQEEIAKLRKE---LHQTQTE 1006
>sp|Q9UZC8|RAD50_PYRAB DNA double-strand break repair Rad50 ATPase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=rad50 PE=3 SV=1
Length = 880
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 24/139 (17%)
Query: 15 SHIVMSEKVQSLAGSIYQEFEKMITKYDEDVVKDLMPLVVNVLESLDLAFTENQEHEVEL 74
S I +E ++ L + E K +++ +E + +P + LE + +E+ EL
Sbjct: 187 SFIARTENIEELIKANEDELTKKLSEINE--ISSKLPPIRGELEKV-------RENVKEL 237
Query: 75 ELLREDNEQLVTQYEREKQLRKAADQKLFQIEDALEDDKKELNSKIESLESIVRMLELKS 134
E ++ +L Q E+ K +K ++K+ QIE ++E+ K +KI LE IV+
Sbjct: 238 ESIKGKISELKIQVEKLKGRKKGLEEKIVQIERSIEEKK----AKISELEEIVK------ 287
Query: 135 KNASDHVYRLEEKEQELKK 153
+ +L+EKE+E +K
Sbjct: 288 -----DIPKLQEKEKEYRK 301
>sp|Q8C0G2|T3JAM_MOUSE TRAF3-interacting JNK-activating modulator OS=Mus musculus
GN=Traf3ip3 PE=1 SV=2
Length = 513
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 10/103 (9%)
Query: 59 SLDLAFTENQEHEVELELLREDNEQLVTQY-EREKQLR------KAADQKLFQIEDAL-- 109
SL LA + QE + + E L+ED L Q+ E E QL + AD + Q+ AL
Sbjct: 308 SLALAEQKCQEWKSQYEALKEDWRTLGDQHRELESQLHVLQSKLQGADSRDSQMSQALQL 367
Query: 110 -EDDKKELNSKIESLESIVRMLELKSKNASDHVYRLEEKEQEL 151
E++ +EL +K+ESL+ ++++ D + + EE++Q L
Sbjct: 368 LENEHQELQTKLESLQGDGEQQSSETQDLQDQLKKSEEEKQAL 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.129 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,490,143
Number of Sequences: 539616
Number of extensions: 2892811
Number of successful extensions: 23271
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 1708
Number of HSP's that attempted gapping in prelim test: 18848
Number of HSP's gapped (non-prelim): 5506
length of query: 205
length of database: 191,569,459
effective HSP length: 112
effective length of query: 93
effective length of database: 131,132,467
effective search space: 12195319431
effective search space used: 12195319431
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)