BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2153
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58A65|JIP4_MOUSE C-Jun-amino-terminal kinase-interacting protein 4 OS=Mus musculus
GN=Spag9 PE=1 SV=2
Length = 1321
Score = 330 bits (845), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/338 (50%), Positives = 210/338 (62%), Gaps = 79/338 (23%)
Query: 13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
K+ D+ L VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R + V+
Sbjct: 998 KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 1057
Query: 73 NKVWCGYKNKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129
+KVWCGY+NKI+VV PK++K SFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 1117
Query: 130 HTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQ 189
HTYQHLQDVDIEPYVSKMLG
Sbjct: 1118 HTYQHLQDVDIEPYVSKMLG---------------------------------------- 1137
Query: 190 SHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASG-------------------KA 230
TGKLGFSFVRITAL++S +RLW+GT +G +
Sbjct: 1138 -----------TGKLGFSFVRITALMVSCNRLWVGTGNGVIISIPLTETNKTSGTPGNRP 1186
Query: 231 PSGVRVFSEPATSVITPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPGSGGLSAATSVPQ 290
S +RV+ + + +TPGTFIPYCSMA AQL FHGHRDAVKFFV+VPG ++S
Sbjct: 1187 GSVIRVYGDENSDKVTPGTFIPYCSMAHAQLCFHGHRDAVKFFVAVPGQVISPQSSSGGA 1246
Query: 291 DCPVIENVSGTEKP------PSMLVMSGGEGYIDFRIA 322
D + S ++P SMLV+SGGEGYIDFR+
Sbjct: 1247 DLTADKAGSSAQEPSSQTPLKSMLVISGGEGYIDFRMG 1284
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 175 ANNPADILESFTVCQSHLLCIASVPGTGKLGF 206
A P +IL+SFTVC SH+LCIASVPG + +
Sbjct: 775 AVQPGNILDSFTVCNSHVLCIASVPGARETDY 806
>sp|O60271|JIP4_HUMAN C-Jun-amino-terminal kinase-interacting protein 4 OS=Homo sapiens
GN=SPAG9 PE=1 SV=4
Length = 1321
Score = 328 bits (840), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 176/339 (51%), Positives = 212/339 (62%), Gaps = 81/339 (23%)
Query: 13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
K+ D+ L VHV+G V+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R + V+
Sbjct: 998 KLKDSILSIVHVKGIVLVALADGTLAIFHRGVDGQWDLSNYHLLDLGRPHHSIRCMTVVH 1057
Query: 73 NKVWCGYKNKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129
+KVWCGY+NKI+VV PK++K SFDAHPR+ESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DKVWCGYRNKIYVVQPKAMKIEKSFDAHPRKESQVRQLAWVGDGVWVSIRLDSTLRLYHA 1117
Query: 130 HTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQ 189
HTYQHLQDVDIEPYVSKMLG
Sbjct: 1118 HTYQHLQDVDIEPYVSKMLG---------------------------------------- 1137
Query: 190 SHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASG----------KAPSGV----- 234
TGKLGFSFVRITAL++S +RLW+GT +G SGV
Sbjct: 1138 -----------TGKLGFSFVRITALMVSCNRLWVGTGNGVIISIPLTETNKTSGVPGNRP 1186
Query: 235 ----RVFSEPATSVITPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPGS----GGLSAAT 286
RV+ + + +TPGTFIPYCSMA AQL FHGHRDAVKFFV+VPG S+ T
Sbjct: 1187 GSVIRVYGDENSDKVTPGTFIPYCSMAHAQLCFHGHRDAVKFFVAVPGQVISPQSSSSGT 1246
Query: 287 SVPQD--CPVIENVSGTEKP-PSMLVMSGGEGYIDFRIA 322
+ D P + G++ P SMLV+SGGEGYIDFR+
Sbjct: 1247 DLTGDKAGPSAQE-PGSQTPLKSMLVISGGEGYIDFRMG 1284
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 175 ANNPADILESFTVCQSHLLCIASVPGTGKLGF 206
A P +IL+SFTVC SH+LCIASVPG + +
Sbjct: 775 AVQPGNILDSFTVCNSHVLCIASVPGARETDY 806
>sp|Q9UPT6|JIP3_HUMAN C-Jun-amino-terminal kinase-interacting protein 3 OS=Homo sapiens
GN=MAPK8IP3 PE=1 SV=3
Length = 1336
Score = 315 bits (806), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 177/353 (50%), Positives = 208/353 (58%), Gaps = 95/353 (26%)
Query: 13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
K+ D+ L VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A VY
Sbjct: 997 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVY 1056
Query: 73 NKVWCGYKNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129
++VWCGYKNK+HV+ PK++ KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1057 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1116
Query: 130 HTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQ 189
HT+QHLQDVDIEPYVSKMLG
Sbjct: 1117 HTHQHLQDVDIEPYVSKMLG---------------------------------------- 1136
Query: 190 SHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASGKAPS---------------GV 234
TGKLGFSFVRITALL++ SRLW+GT +G S G+
Sbjct: 1137 -----------TGKLGFSFVRITALLVAGSRLWVGTGNGVVISIPLTETVVLHRGQLLGL 1185
Query: 235 RVFSEPATS--VITPG----------------TFIPYCSMAQAQLSFHGHRDAVKFFVSV 276
R TS PG +FIPYCSMAQAQL FHGHRDAVKFFVSV
Sbjct: 1186 RANKTSPTSGEGARPGGIIHVYGDDSSDRAASSFIPYCSMAQAQLCFHGHRDAVKFFVSV 1245
Query: 277 PGS-------GGLSAATSVPQDCPVIENVSGTEKPPSMLVMSGGEGYIDFRIA 322
PG+ L + P V G +K ++LV+SGGEGYIDFRI
Sbjct: 1246 PGNVLATLNGSVLDSPAEGPGPAAPASEVEG-QKLRNVLVLSGGEGYIDFRIG 1297
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 175 ANNPADILESFTVCQSHLLCIASVP 199
AN P +++ FTVC +H+LCI+S+P
Sbjct: 790 ANQPGTVVDQFTVCNAHVLCISSIP 814
>sp|Q9ESN9|JIP3_MOUSE C-Jun-amino-terminal kinase-interacting protein 3 OS=Mus musculus
GN=Mapk8ip3 PE=1 SV=1
Length = 1337
Score = 313 bits (801), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 174/352 (49%), Positives = 206/352 (58%), Gaps = 93/352 (26%)
Query: 13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
K+ D+ L VHV+GRV+ ALADG++AIF RG DGQWDLS YH + LG PHHS+R +A V
Sbjct: 998 KLKDSVLSLVHVKGRVLVALADGTLAIFHRGEDGQWDLSNYHLMDLGHPHHSIRCMAVVN 1057
Query: 73 NKVWCGYKNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129
++VWCGYKNK+HV+ PK++ KSFDAHPRRESQVRQ+ W GDGVWVSIRLDSTLR+Y+A
Sbjct: 1058 DRVWCGYKNKVHVIQPKTMQIEKSFDAHPRRESQVRQLAWIGDGVWVSIRLDSTLRLYHA 1117
Query: 130 HTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQ 189
HT+QHLQDVDIEPYVSKMLG
Sbjct: 1118 HTHQHLQDVDIEPYVSKMLG---------------------------------------- 1137
Query: 190 SHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASGKAPS---------------GV 234
TGKLGFSFVRITALLI+ +RLW+GT +G S G+
Sbjct: 1138 -----------TGKLGFSFVRITALLIAGNRLWVGTGNGVVISIPLTETVVLHRGQLLGL 1186
Query: 235 RVFSEPATS--VITPG----------------TFIPYCSMAQAQLSFHGHRDAVKFFVSV 276
R TS PG +FIPYCSMAQAQL FHGHRDAVKFFVSV
Sbjct: 1187 RANKTSPTSGEGTRPGGIIHVYGDDSSDKAASSFIPYCSMAQAQLCFHGHRDAVKFFVSV 1246
Query: 277 PG------SGGLSAATSVPQDCPVIENVSGTEKPPSMLVMSGGEGYIDFRIA 322
PG +G + + S + +K + LV+SGGEGYIDFRI
Sbjct: 1247 PGNVLATLNGSVLDSPSEGPGPAAPAADAEGQKLKNALVLSGGEGYIDFRIG 1298
Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 175 ANNPADILESFTVCQSHLLCIASVPG 200
AN P I++ FTVC +H+LCI+S+P
Sbjct: 791 ANQPGTIVDQFTVCNAHVLCISSIPA 816
>sp|Q9GQF1|JIP3_DROME JNK-interacting protein 3 OS=Drosophila melanogaster GN=syd PE=1 SV=1
Length = 1227
Score = 278 bits (710), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 155/316 (49%), Positives = 186/316 (58%), Gaps = 67/316 (21%)
Query: 11 LNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSL 68
L+++L D L VHV+ RVV ALA+ +A+FRR DGQWDL+ YH VTLG +HS+R L
Sbjct: 940 LHRVLLPDAVLAIVHVEARVVVALANAQLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCL 999
Query: 69 AAVYNKVWCGYKNKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 125
++W ++NKI +VDP SL S DAHPR+ESQVRQM G GVWVSIRLDSTLR
Sbjct: 1000 CVAGERIWAAHRNKIFIVDPVSLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLR 1059
Query: 126 MYNAHTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESF 185
+YN HT++H QDVDIEPYVSKMLG
Sbjct: 1060 LYNTHTFEHKQDVDIEPYVSKMLG------------------------------------ 1083
Query: 186 TVCQSHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASGKAPSGVRVFSEPATSVI 245
TGKLGFSFVRITAL++S +RLWIGT++G S +P +S
Sbjct: 1084 ---------------TGKLGFSFVRITALMVSCNRLWIGTSNGVIISVPLAEVQPKSSS- 1127
Query: 246 TPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPGSGGLSAATSVPQDCPVIENVSGTEKPP 305
P +P C MA AQLSFHGHRDAVKFFVSVP + Q + ++ T K P
Sbjct: 1128 DPHGQMPLCCMANAQLSFHGHRDAVKFFVSVP----------MLQQPNLNGGLTFTNKRP 1177
Query: 306 SMLVMSGGEGYIDFRI 321
MLVM GGEGYIDFRI
Sbjct: 1178 DMLVMCGGEGYIDFRI 1193
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 14/79 (17%)
Query: 157 VTIRTLLAETIISPFGWY--------------ANNPADILESFTVCQSHLLCIASVPGTG 202
V++ TL ET +S F W AN A +L++F +C SHLLCIASV G
Sbjct: 715 VSLETLEPETQLSSFVWICTSTHAASTVSVVDANQSATVLDAFPICASHLLCIASVQGAM 774
Query: 203 KLGFSFVRITALLISSSRL 221
+ ++ + + ++ + L
Sbjct: 775 ESDYALLEQSEVVKAGEML 793
>sp|Q29EP6|JIP3_DROPS JNK-interacting protein 3 OS=Drosophila pseudoobscura pseudoobscura
GN=syd PE=3 SV=2
Length = 1235
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/322 (48%), Positives = 184/322 (57%), Gaps = 79/322 (24%)
Query: 11 LNKIL--DTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSL 68
L+++L D L VHV+ RVV ALA+ +A+FRR DGQWDL+ YH VTLG +HS+R L
Sbjct: 948 LHRVLLPDAVLAIVHVEARVVVALANAQLAVFRRQTDGQWDLNSYHLVTLGDRNHSIRCL 1007
Query: 69 AAVYNKVWCGYKNKIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLR 125
++W ++NKI +VDP SL S DAHPR+ESQVRQM G GVWVSIRLDSTLR
Sbjct: 1008 CVAGERIWAAHRNKIFIVDPISLNIVHSLDAHPRKESQVRQMAATGAGVWVSIRLDSTLR 1067
Query: 126 MYNAHTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESF 185
+YN HT++H QDVDIEPYVSKMLG
Sbjct: 1068 LYNTHTFEHKQDVDIEPYVSKMLG------------------------------------ 1091
Query: 186 TVCQSHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASGKAPSGVRVFSEPATSVI 245
TGKLGFSFVRITAL++S +RLWIGT++G S + TS
Sbjct: 1092 ---------------TGKLGFSFVRITALMVSCNRLWIGTSNGVIISVPLAEVQQKTSS- 1135
Query: 246 TPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPG------SGGLSAATSVPQDCPVIENVS 299
P +P C MA AQLSFHGHRDAVKFFVSVP +GGL+
Sbjct: 1136 DPHGQMPLCCMANAQLSFHGHRDAVKFFVSVPMLQQPNLNGGLTFVN------------- 1182
Query: 300 GTEKPPSMLVMSGGEGYIDFRI 321
K P MLVM GGEGYIDFRI
Sbjct: 1183 ---KRPDMLVMCGGEGYIDFRI 1201
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 14/78 (17%)
Query: 158 TIRTLLAETIISPFGWY--------------ANNPADILESFTVCQSHLLCIASVPGTGK 203
++ TL ET +S F W AN A +L++F +C SHLLCIASV G +
Sbjct: 717 SLETLEPETQLSSFVWICTSTHAASTVSVVDANQSATVLDAFPICSSHLLCIASVQGAME 776
Query: 204 LGFSFVRITALLISSSRL 221
++ + + ++ + L
Sbjct: 777 SDYALLEQSEVVKAGEML 794
>sp|P34609|JIP_CAEEL JNK-interacting protein OS=Caenorhabditis elegans GN=unc-16 PE=1 SV=3
Length = 1157
Score = 247 bits (631), Expect = 7e-65, Method: Composition-based stats.
Identities = 144/341 (42%), Positives = 182/341 (53%), Gaps = 94/341 (27%)
Query: 13 KILDTALPPVHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVY 72
K+ D L VH + R+ ALA+G++AIF R G+W YH++ +G SVRSL V
Sbjct: 846 KMPDAVLSIVHYKSRIFAALANGTIAIFHRNKHGEWSDEGYHSLRVGSATSSVRSLCLVS 905
Query: 73 NKVWCGYKNKIHVVDPKSL---KSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNA 129
+W YKN + V+D +SL K F AHPR++SQVR M W G GVW+SIRLDSTLR+Y+A
Sbjct: 906 TNIWATYKNCVVVLDAESLQIVKVFAAHPRKDSQVRNMQWVGAGVWLSIRLDSTLRLYHA 965
Query: 130 HTYQHLQDVDIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQ 189
HTY+HLQDVDIEPYV+KMLG
Sbjct: 966 HTYEHLQDVDIEPYVTKMLG---------------------------------------- 985
Query: 190 SHLLCIASVPGTGKLGFSFVRITALLISSSRLWIGTASG--------------------K 229
T KL FS++R TALL+S+ RLWIGT +G K
Sbjct: 986 -----------TSKLDFSYMRTTALLVSNRRLWIGTGTGVIISVPFSGQLEKKIETKDSK 1034
Query: 230 APSG----VRVF---SEPATS-VITPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPGSGG 281
P+G VRV+ SE AT+ T FIPYC++A AQLSFHGH+D+VKFF+ VPG+
Sbjct: 1035 RPAGPGGLVRVYGATSENATNDEKTNDDFIPYCNLAHAQLSFHGHKDSVKFFLGVPGASK 1094
Query: 282 LSAATSVPQDCPVIENVSGTEKPPSMLVMSGGEGYIDFRIA 322
E+ S ML+MSGG+GYIDFRI
Sbjct: 1095 NG------------EDESAEVTLRRMLIMSGGDGYIDFRIG 1123
Score = 41.6 bits (96), Expect = 0.009, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 175 ANNPADILESFTVCQSHLLCIASVPG 200
ANNP +I+E+F C SHLLCI +V G
Sbjct: 667 ANNPNNIIETFPACDSHLLCIQAVSG 692
>sp|Q80U35|ARHGH_MOUSE Rho guanine nucleotide exchange factor 17 OS=Mus musculus GN=Arhgef17
PE=1 SV=2
Length = 2057
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 73/317 (23%)
Query: 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN 81
+++ +V +LA+G + +++R WD + ++TLG + + +V ++WCG +N
Sbjct: 1772 LYLNNKVFVSLANGELVVYQREAGRFWDPQNFKSMTLGSQGSPITKMVSVGGRLWCGCQN 1831
Query: 82 KIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 138
++ V+ P +L+ +F V M + GVWV+++ + + +Y+ T++ L +V
Sbjct: 1832 RVLVLSPDTLQLEHTFYVGQDSSRSVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEV 1891
Query: 139 DIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQSHLLCIASV 198
D+ P V +ML A + A I + C
Sbjct: 1892 DVTPPVHRML--------------------------AGSDAIIRQHKAAC---------- 1915
Query: 199 PGTGKLGFSFVRITALLISSSRLWIGTASGKAPSGVRVFSEPATSVITPGTFIPYCSMAQ 258
+RITALL+ + LW+GT++G + + + P+T P ++
Sbjct: 1916 ----------LRITALLVCAELLWVGTSAGVV---LTIPTSPST------VSCPRAPLSP 1956
Query: 259 AQLSFHGHRDAVKFFVSVPGSGGLSAATSV--------PQDCPVIENVSG------TEKP 304
A L GH V+F +V G + S P+ P +++ T
Sbjct: 1957 AGL-CQGHTGHVRFLAAVQLPEGFNLLCSTPPPPPDTGPEKLPSLDHRDSPRRRGPTSAR 2015
Query: 305 PSMLVMSGGEGYIDFRI 321
P MLV+SGG+G DFR+
Sbjct: 2016 PKMLVISGGDGSEDFRL 2032
>sp|Q96PE2|ARHGH_HUMAN Rho guanine nucleotide exchange factor 17 OS=Homo sapiens GN=ARHGEF17
PE=1 SV=1
Length = 2063
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 135/318 (42%), Gaps = 75/318 (23%)
Query: 22 VHVQGRVVCALADGSVAIFRRGPDGQWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKN 81
+++ +V +LA+G + +++R WD + +VTLG + + +V ++WCG +N
Sbjct: 1778 LYLNNQVFVSLANGELVVYQREAGHFWDPQNFKSVTLGTQGSPITKMVSVGGRLWCGCQN 1837
Query: 82 KIHVVDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDV 138
++ V+ P +L+ F V M + GVWV+++ + + +Y+ T++ L +V
Sbjct: 1838 RVLVLSPDTLQLEHMFYVGQDSSRCVACMVDSSLGVWVTLKGSAHVCLYHPDTFEQLAEV 1897
Query: 139 DIEPYVSKMLGMYTFCSCVTIRTLLAETIISPFGWYANNPADILESFTVCQSHLLCIASV 198
D+ P V +ML A + A I + C
Sbjct: 1898 DVTPPVHRML--------------------------AGSDAIIRQHKAAC---------- 1921
Query: 199 PGTGKLGFSFVRITALLISSSRLWIGTASGKAPSGVRVFSEPATSVITPGTF-IPYCSMA 257
+RITALL+ LW+GT++G V + P +PGT P ++
Sbjct: 1922 ----------LRITALLVCEELLWVGTSAGV------VLTMP----TSPGTVSCPRAPLS 1961
Query: 258 QAQLSFHGHRDAVKFFVSVPGSGGLS--------AATSVPQDCPVIENVSG------TEK 303
L GH V+F +V G + + P+ P +E+
Sbjct: 1962 PTGLG-QGHTGHVRFLAAVQLPDGFNLLCPTPPPPPDTGPEKLPSLEHRDSPWHRGPAPA 2020
Query: 304 PPSMLVMSGGEGYIDFRI 321
P MLV+SGG+GY DFR+
Sbjct: 2021 RPKMLVISGGDGYEDFRL 2038
>sp|O15013|ARHGA_HUMAN Rho guanine nucleotide exchange factor 10 OS=Homo sapiens GN=ARHGEF10
PE=1 SV=4
Length = 1369
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 30 CALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYKNKIHVVDP 88
L +G+VA + R PDG WD + LG LP VRSL + + +W ++ ++
Sbjct: 1037 AGLVNGAVASYARAPDGSWDSEPQKVIKLGVLP---VRSLLMMEDTLWAASGGQVFIISV 1093
Query: 89 KSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVS 145
++ +AH + M +G G+W++ STLR+++ T +HLQD++I V
Sbjct: 1094 ETHAVEGQLEAHQEEGMVISHMAVSGVGIWIAFTSGSTLRLFHTETLKHLQDINIATPVH 1153
Query: 146 KMLGMYTFCSCVTI 159
ML + S ++
Sbjct: 1154 NMLPGHQRLSVTSL 1167
>sp|Q8C033|ARHGA_MOUSE Rho guanine nucleotide exchange factor 10 OS=Mus musculus GN=Arhgef10
PE=1 SV=2
Length = 1345
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 7/133 (5%)
Query: 31 ALADGSVAIFRRGPDGQWDLSKYHTVTLG-LPHHSVRSLAAVYNKVWCGYKNKIHV--VD 87
L +GSVA + + PDG W+ + LG LP VRSL V +W ++ + V+
Sbjct: 1015 GLVNGSVASYTKAPDGSWNSEPQQVIKLGVLP---VRSLLLVEGALWAASGGQVFMASVE 1071
Query: 88 PKSLKS-FDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPYVSK 146
++++ +AH + M AG G+W++ STLR+++ T +HLQDV+I+ V
Sbjct: 1072 THTIENQLEAHQDEGMVISHMAVAGVGIWIAFTSGSTLRLFHTETLKHLQDVNIDAPVHS 1131
Query: 147 MLGMYTFCSCVTI 159
ML + S ++
Sbjct: 1132 MLPGHQRLSVTSL 1144
>sp|A2AWP8|ARGAL_MOUSE Rho guanine nucleotide exchange factor 10-like protein OS=Mus
musculus GN=Arhgef10l PE=1 SV=1
Length = 1280
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 28 VVCALADGSVAIF-RRGPDGQWDL-SKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHV 85
++ L DG++A + R D WDL S +T+G +R+L ++ + W ++ V
Sbjct: 935 LLAGLQDGTLAAYPRTSGDIPWDLESPPMCITVG--PGPIRTLLSLEDAAWASCGPRVTV 992
Query: 86 VDPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEP 142
+D +L+ SF+AH V M AG GVW++ S++R+++ T +HLQ+++I
Sbjct: 993 LDAATLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIAT 1052
Query: 143 YVSKML-GMYTFC 154
+ +L G C
Sbjct: 1053 RTTFLLPGQKHLC 1065
>sp|Q5R5M3|ARGAL_PONAB Rho guanine nucleotide exchange factor 10-like protein OS=Pongo
abelii GN=ARHGEF10L PE=2 SV=1
Length = 1233
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 70/132 (53%), Gaps = 6/132 (4%)
Query: 28 VVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVV 86
++ L DG++A + R G WDL + V L + VR+L ++ + VW ++ V+
Sbjct: 891 LLAGLQDGTLAAYPRTSGGVLWDL-ESPPVCLTVGPGPVRTLLSLEDAVWASCGPRVTVL 949
Query: 87 DPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143
+ +L+ SF+AH V M AG GVW++ +++R+++ T +HLQ+++I
Sbjct: 950 EATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQEINIATR 1009
Query: 144 VSKML-GMYTFC 154
+ +L G C
Sbjct: 1010 TTFLLPGQKHLC 1021
>sp|Q29RM4|ARGAL_BOVIN Rho guanine nucleotide exchange factor 10-like protein OS=Bos taurus
GN=ARHGEF10L PE=2 SV=1
Length = 1237
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 28 VVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVV 86
++ L DG++A + R WDL + + L + VR+L ++ VW ++ V+
Sbjct: 893 LLAGLQDGTLAAYPRTSGSVPWDL-ESPPMCLPVGPGPVRALLSLEEAVWASCGPRVTVL 951
Query: 87 DPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143
D SL+ SF+AH V M AG GVW++ S++R+++ T +HLQ+++I
Sbjct: 952 DATSLQTQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATR 1011
Query: 144 VSKML-GMYTFC 154
+ +L G C
Sbjct: 1012 TTFLLPGQKHLC 1023
>sp|Q9HCE6|ARGAL_HUMAN Rho guanine nucleotide exchange factor 10-like protein OS=Homo
sapiens GN=ARHGEF10L PE=1 SV=3
Length = 1279
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 28 VVCALADGSVAIFRRGPDG-QWDLSKYHTVTLGLPHHSVRSLAAVYNKVWCGYKNKIHVV 86
++ L DG++A + R G WDL + V L + VR+L ++ + VW + V+
Sbjct: 937 LLAGLQDGTLAAYPRTSGGVLWDL-ESPPVCLTVGPGPVRTLLSLEDAVWASCGPWVTVL 995
Query: 87 DPKSLK---SFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQDVDIEPY 143
+ +L+ SF+AH V M AG GVW++ +++R+++ T +HLQ+++I
Sbjct: 996 EATTLQPQQSFEAHQDEAVSVTHMVKAGSGVWMAFSSGTSIRLFHTETLEHLQEINIATR 1055
Query: 144 VSKML-GMYTFC 154
+ +L G C
Sbjct: 1056 TTFLLPGQKHLC 1067
>sp|O34335|MSME_BACSU Putative binding protein MsmE OS=Bacillus subtilis (strain 168)
GN=msmE PE=3 SV=1
Length = 426
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 77 CGYKNKIHVVDPKSLKSFDAHPRRESQVRQMTWAGDGVWVSIRLDSTLRMYNAHTYQHLQ 136
+K+ + + K +F A P Q+ + T G+ +++ D ++ A+ Y++ Q
Sbjct: 310 AAWKDSPQLKEAKDFIAFMARPANAKQMAEATSLPSGL-TNVKAD----IFYANDYEYYQ 364
Query: 137 DVDIEPYVSKML---GMYTFCSCVTIRTLLAETIISP 170
DV +EPY ++ GM+ T+ LA I++P
Sbjct: 365 DVKVEPYFDRLYLPNGMWDVLG--TVGQELAADILAP 399
>sp|Q9V7A4|ITA4_DROME Integrin alpha-PS4 OS=Drosophila melanogaster GN=alphaPS4 PE=2 SV=2
Length = 1069
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 25/55 (45%)
Query: 249 TFIPYCSMAQAQLSFHGHRDAVKFFVSVPGSGGLSAATSVPQDCPVIENVSGTEK 303
IPY SM + LS H D K + PG + + Q+ P I+ SG ++
Sbjct: 188 NLIPYYSMGELGLSAHVSDDNSKLLMGAPGIDQWKGSVHLKQEVPSIKTSSGRQR 242
>sp|Q2GSJ9|HIR1_CHAGB Protein HIR1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51
/ DSM 1962 / NBRC 6347 / NRRL 1970) GN=HIR1 PE=3 SV=1
Length = 1080
Score = 32.3 bits (72), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 87 DPKSLKSFDAHPR---RESQVRQMTWAGDG-VWVSIRLDSTLRMYNAHTYQHLQDVDI 140
+P ++++ H R +S V+ + W+ D + VS+ LDS + +++ HT++ L+ + +
Sbjct: 114 EPPPVENWKTHKRLVGHDSDVQDLAWSYDNSILVSVGLDSKVVVWSGHTFEKLKTIAV 171
>sp|C3KZ35|BIOD_CLOB6 ATP-dependent dethiobiotin synthetase BioD OS=Clostridium botulinum
(strain 657 / Type Ba4) GN=bioD PE=3 SV=1
Length = 227
Score = 32.0 bits (71), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 273 FVSVPGSGGLSAATSVPQDCPVIENVSGTEKPPSMLVMSGGEGYIDFRIARL 324
+++V GSGG+ S+ ++ ++EN+ + K P+++V G G I+ I L
Sbjct: 112 YITVEGSGGIICPISMGKEKIMLENIIKSFKLPAIVVADAGLGTINSTILTL 163
>sp|Q7TSB7|KISS1_RAT Metastasis-suppressor KiSS-1 OS=Rattus norvegicus GN=Kiss1 PE=2
SV=1
Length = 130
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 234 VRVFSEPATSVITPGTFIPYCSMAQAQLSFHGHRDAVKFFVSVPGSGGLSAATSVPQDCP 293
V F EP + P + Q + + ++ S PG+ GL A + P CP
Sbjct: 15 VASFGEPLAKMAPVVNPEPTGQQSGPQELVNAWQKGPRYAESKPGAAGLRARRTSP--CP 72
Query: 294 VIENVSGTEKPP 305
+EN +G ++PP
Sbjct: 73 PVENPTGHQRPP 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,822,567
Number of Sequences: 539616
Number of extensions: 5190350
Number of successful extensions: 10308
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 10234
Number of HSP's gapped (non-prelim): 52
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)